isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
transcript_1.known	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15623	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00002_+_0_1000
transcript_10.known	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00034_+_0_1000
transcript_100.known	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_4	277.837519964457	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
transcript_1000.known	chr1	+	1001	7	FSM	ENSG00000120948.19	ENST00000472476.5	1001	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	561.71624410274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCCAATGCCGAACCTA	10992077	True	NA	-24	True	ATTAAA	-15	NA	11012653	11022176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016122_11016255_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_10002.known	chr1	-	3003	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	68.9591259994001	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAAGTTACAGAGA	-224326003	True	NA	-2	True	AATAAA	-26	NA	224330189	224227336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_10007.known	chr1	-	2897	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	36.7676701770446	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-224325986	True	NA	-10	True	AATAAA	-43	NA	224330172	224227344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_10010.known	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_21	30.9661507832515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-224325984	True	NA	1	True	AATAAA	-29	NA	224330170	224227333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
transcript_10027.known	chr1	+	912	5	FSM	ENSG00000143771.12	ENST00000366860.9	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1830.06589703759	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGATTTCTAGTTC	224338472	True	NA	41	True	TATAAA	-24	NA	224356886	224375998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224356994_224364108_224364456_224365878_224365992_224371282_224371424_224375794
transcript_10041.known	chr1	+	1525	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1741.56066663081	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	224338473	True	NA	11	True	AATAAA	-19	NA	224356887	224376884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
transcript_10044.known	chr1	+	808	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	1577.84734686217	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338478	True	NA	NA	False	AATAAA	-24	NA	224356892	224379452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
transcript_10045.known	chr1	+	4096	5	FSM	ENSG00000143771.12	ENST00000465271.6	4096	5	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_3	55.5714630003566	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338464	True	NA	NA	False	AATAAA	-24	NA	224356878	224379452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224375794
transcript_10046.known	chr1	+	2539	6	FSM	ENSG00000143786.8	ENST00000272133.4	2539	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.35609943282828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	224616137	True	NA	16	True	ATTAAA	-18	NA	224616316	224740554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224617256_224680957_224681027_224684795_224684844_224730461_224730575_224734562_224734707_224739328
transcript_10048.known	chr1	+	968	3	FSM	ENSG00000143786.8	ENST00000483512.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTTTGGTTGGAACTC	224434621	True	NA	NA	False	NA	NA	NA	224434911	224521555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224435188_224515740_224515877_224520999
transcript_10051.nnic	chr1	-	671	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-7	-513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.657891697365	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224615995	True	NA	-7	True	AATAAA	-19	NA	224616227	224611400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_224611593_224615203_224615428_224615611_224615737_224616097
transcript_10055.nnic	chr1	-	537	3	NNC	ENSG00000233384.3	novel	3507	3	NA	NA	-191	-507	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAAGGCATTCTGTTAC	-224616400	False	NA	-1	True	AATAAA	-25	NA	224616411	224611394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_224611593_224615611_224615737_224616197
transcript_10062.nic	chr1	+	1146	8	NIC	ENSG00000185842.16	novel	2215	11	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	80.8533568018202	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	224925384	True	NA	3	True	AATAAA	-16	NA	224929616	224969829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967515_224968758_224968875_224969633
transcript_10063.nic	chr1	+	1215	8	NIC	ENSG00000185842.16	novel	1984	11	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_6	56.0010932837886	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	224925384	True	NA	3	True	AATAAA	-16	NA	224929616	224969829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
transcript_10068.known	chr1	+	1103	7	FSM	ENSG00000185842.16	ENST00000366850.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	57.2463002200919	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCAGAAACTTTAT	224925428	True	NA	10	True	AATAAA	-23	NA	224929660	224967923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_1008.known	chr1	+	1031	7	FSM	ENSG00000120948.19	ENST00000629725.2	1031	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	423.427942184054	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGCCATAGGAATAC	10992045	True	NA	NA	False	NA	NA	NA	11012621	11023248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022251_11023192
transcript_10084.known	chr1	-	3748	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	65.9230320437869	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	-225416920	True	NA	-6	True	AATAAA	-21	NA	225428038	225401501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_10092.known	chr1	-	13168	15	FSM	ENSG00000154380.18	ENST00000366844.7	13168	15	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_9	56.72346093468	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATGAGATTTGTATTT	-225640912	True	NA	-8	True	AATAAA	-17	NA	225653142	225486834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_101.known	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_+_1100_1600
transcript_10103.known	chr1	+	1481	3	FSM	ENSG00000143742.14	ENST00000304786.12	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	6096	junction_2	673.5	8027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTTGTGTTGAAGT	225760885	True	NA	12	True	AATAAA	-16	NA	225777825	225790464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225789239
transcript_10104.known	chr1	+	1596	4	FSM	ENSG00000143742.14	ENST00000366839.8	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	3141.73402226647	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTGTTGAAGTTT	225760896	True	NA	14	True	AATAAA	-18	NA	225777836	225790466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789239
transcript_10105.known	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	3673	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	225760931	True	NA	16	True	AATAAA	-20	NA	225777871	225790468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225789258
transcript_10106.known	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_17	41.2838875955257	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	-225877045	True	NA	-12	True	AGTAAA	-17	NA	225882380	225845535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_10112.known	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	20.4935203174076	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	225796016	True	NA	30	True	GATAAA	-17	NA	225810123	225845563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_10119.nnic	chr1	+	475	4	NNC	ENSG00000143819.13	novel	1635	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	145.171928722081	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	225796016	True	NA	30	True	GATAAA	-17	NA	225810123	225845563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_225810170_225828724_225828913_225831778_225831934_225845477
transcript_10127.known	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	428.279276744613	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908514	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
transcript_10132.known	chr1	-	1549	6	FSM	ENSG00000143811.20	ENST00000612039.4	1549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	553.060358369681	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	NA	False	NA	-2	True	AATAAA	-19	NA	225924340	225919876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225922203_225922384_225923700_225923772_225924043
transcript_10140.nic	chr1	-	1519	2	ISM	ENSG00000143768.13	ENST00000366820.10	2019	4	1543	0	424	0	3prime_fragment	FALSE	canonical	3	215	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-225939651	False	NA	-5	True	AATAAA	-14	NA	225939677	225936602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_225937805_225939360
transcript_10141.nnic	chr1	-	1639	2	NNC	ENSG00000143768.13	novel	2019	4	NA	NA	460	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-225939615	False	1759	-5	True	AATAAA	-14	NA	225939641	225936602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_225937961_225939360
transcript_10144.known	chr1	-	3987	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	15.6808446484521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-225994934	True	NA	-6	True	AATAAA	-23	NA	225999343	225982701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_10149.nnic	chr1	-	818	5	NNC	ENSG00000143751.10	novel	3987	7	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	55.3398590529466	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-225994976	True	NA	-6	True	AATAAA	-23	NA	225999385	225982701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_225982927_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_10158.known	chr1	+	1151	4	FSM	ENSG00000163041.13	ENST00000655399.1	1151	4	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	2565.50194352338	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACCTGCTTTTGGTCTT	225971731	True	NA	NA	False	ATTAAA	-11	NA	226062749	226071997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226062949_226064328_226064480_226065655_226065810_226071350
transcript_1016.known	chr1	+	4185	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	60.7177074666032	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	10992077	True	NA	4	True	AATAAA	-20	NA	11012653	11025492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_10166.known	chr1	+	607	4	FSM	ENSG00000163041.13	ENST00000666609.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2557.96677069895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTCTCTTCTTCC	226062674	True	NA	NA	False	NA	NA	NA	226063465	226071521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226063597_226064328_226064480_226065655_226065810_226071350
transcript_10170.known	chr1	+	895	4	FSM	ENSG00000163041.13	ENST00000661429.1	895	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2570.68239967523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTATAATAATTATAAATA	226062702	True	NA	NA	False	NA	NA	NA	226063493	226071752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226063682_226064328_226064480_226065655_226065810_226071350
transcript_10172.known	chr1	+	600	3	FSM	ENSG00000163041.13	ENST00000656829.1	600	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2656	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATGGTGTTTGTAGCAT	225971764	False	NA	NA	False	AGTAAA	-18	NA	226062782	226071846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226062812_226065734_226065810_226071350
transcript_10174.known	chr1	+	559	4	FSM	ENSG00000163041.13	ENST00000667897.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2401.73664020202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGTAGTTCTGAACG	225971739	False	NA	NA	False	NA	NA	NA	226062757	226071542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226062812_226064328_226064480_226065655_226065818_226071350
transcript_10175.known	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_5	31.9195417081314	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-226179315	True	NA	0	True	ATTAAA	-15	NA	226186741	226144678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
transcript_10183.known	chr1	-	2998	15	FSM	ENSG00000183814.16	ENST00000681046.1	2998	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	21.2559715499107	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-226307503	True	NA	0	True	AATAAA	-18	NA	226309164	226231156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_10186.known	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	33.0606399992463	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-226307511	True	NA	8	True	AATAAA	-26	NA	226309172	226231148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_10191.nic	chr1	-	1248	10	ISM	ENSG00000183814.16	ENST00000681046.1	2998	15	-19	34210	-11	22326	5prime_fragment	FALSE	canonical	3	98	junction_6	19.0483465469536	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAAGATCTTTCTTCT	-226309160	False	NA	NA	False	AATAAA	-20	NA	226309183	226265366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_10196.nic	chr1	-	1826	9	NIC	ENSG00000183814.16	novel	3567	15	NA	NA	-11	22326	intron_retention	FALSE	canonical	3	98	junction_5	19.3180614969515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAAGATCTTTCTTCT	-226309160	False	NA	NA	False	AATAAA	-20	NA	226309183	226265366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_10198.nic	chr1	-	559	3	ISM	ENSG00000183814.16	ENST00000481685.1	1916	13	71	64650	-11	-9670	5prime_fragment	FALSE	canonical	3	138	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCATTGTGTAGCTCAA	-226309160	False	NA	NA	False	ATTAAA	-29	NA	226309183	226297362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_226297814_226301172_226301206_226309108
transcript_10199.known	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2138	junction_17	237.872804402647	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-226350354	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_102.known	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1081	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_+_4000_4500
transcript_10205.nic	chr1	-	862	5	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	38	27950	-16	0	5prime_fragment	FALSE	canonical	3	2242	junction_4	19.6659604392971	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	-226350377	True	NA	25	True	AAGAAA	-7	NA	226408116	226388697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_1021.known	chr1	+	1388	5	FSM	ENSG00000120948.19	ENST00000439080.6	1388	5	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_2	476.142310659324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAATATTGAGTGGTTG	10992076	True	NA	9	True	AAAAAG	-41	NA	11012652	11022858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11018732_11018874_11020428_11020600_11022123
transcript_10210.known	chr1	+	2369	13	FSM	ENSG00000143801.18	ENST00000676907.1	2369	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	37.6189779233833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	226869325	True	NA	8	True	AATAAA	-8	NA	226870560	226896086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885460_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_10211.known	chr1	+	2249	13	FSM	ENSG00000143801.18	ENST00000366783.8	2249	13	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	15.4943986294689	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGAGTTTGGTCCGTTG	226869380	True	NA	20	True	AATAAA	-20	NA	226870615	226896098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_10212.known	chr1	+	1947	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	29.3838343689557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGGTTTATCCAG	226869384	True	NA	95	True	NA	NA	NA	226870619	226895803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_10214.known	chr1	+	2193	12	FSM	ENSG00000143801.18	ENST00000678320.1	2193	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	37.661388254939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	226869325	True	NA	8	True	AATAAA	-8	NA	226870560	226896086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_10215.known	chr1	+	2026	12	FSM	ENSG00000143801.18	ENST00000678021.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.5482757614346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	226869376	True	NA	8	True	AATAAA	-8	NA	226870611	226896086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_10219.known	chr1	+	2866	15	FSM	ENSG00000163050.18	ENST00000366777.4	2866	15	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_7	25.431781498827	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	226936860	True	NA	22	True	AATAAA	-19	NA	226940293	226987544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226940400_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
transcript_10222.known	chr1	+	8543	4	FSM	ENSG00000181450.18	ENST00000343776.10	8543	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	227558703	True	NA	18	True	AATAAA	-18	NA	227563555	227662461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335
transcript_10229.known	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_1	11.3736537664903	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-227733435	True	NA	-1	True	AATGAA	-15	NA	227735302	227731190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_10230.known	chr1	-	2502	6	FSM	ENSG00000081692.13	ENST00000438896.3	2502	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.4092501589709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTCATATGTGTCTG	-227733544	False	NA	-12	True	NA	NA	NA	227735411	227731233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_227732677_227732928_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_10232.nnic	chr1	-	1303	6	NNC	ENSG00000081692.13	novel	2484	6	NA	NA	-3	845	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.918653007093	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGCCCACCCCTGTCG	-227733438	True	NA	-19	True	AATAAA	-18	NA	227735305	227732302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_227732677_227732880_227732956_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_10233.nnic	chr1	-	1484	6	NNC	ENSG00000081692.13	novel	2484	6	NA	NA	-2	845	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.918653007093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGCCCACCCCTGTCG	-227733437	True	NA	-19	True	AATAAA	-18	NA	227735304	227732302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_227732677_227732880_227733028_227733303_227733682_227733906_227734033_227734650_227734817_227735011
transcript_10239.known	chr1	+	1541	5	FSM	ENSG00000143740.15	ENST00000680695.1	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	162.712937408185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227728378	True	NA	-3	True	NA	NA	NA	227728706	227781208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227731584_227731748_227758994_227759486_227766958_227767084_227780526
transcript_1024.known	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2586	junction_1	81.3330266527061	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	-11040429	True	NA	-7	True	NA	NA	NA	11060018	11054588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
transcript_10240.known	chr1	+	1923	5	FSM	ENSG00000143740.15	ENST00000617596.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	49.443781206538	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227732483	True	NA	15	True	AATAAA	-18	NA	227735434	227781226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_10241.known	chr1	+	2503	5	FSM	ENSG00000143740.15	ENST00000680202.1	2503	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	136.939767781313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	227732729	False	NA	NA	False	NA	NA	NA	227735680	227781821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735731_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_10244.known	chr1	+	1446	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	150.906151851628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227728328	True	NA	15	True	AATAAA	-18	NA	227728656	227781226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
transcript_10245.known	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	144.319860803086	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227732483	True	NA	-3	True	NA	NA	NA	227735434	227781208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
transcript_10246.known	chr1	+	2375	3	FSM	ENSG00000143740.15	ENST00000480897.5	2375	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	227728210	True	NA	NA	False	NA	NA	NA	227728538	227734352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227731584_227731748_227732388
transcript_10249.known	chr1	+	1397	5	FSM	ENSG00000143740.15	ENST00000478768.3	1397	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	121.004906925298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCTCCCTAGTACT	227732483	True	NA	8	True	AATGAA	-20	NA	227735434	227770744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227770570
transcript_10250.known	chr1	+	3452	2	FSM	ENSG00000286389.2	ENST00000665412.1	3452	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATACTGATTTCAT	227788468	True	NA	NA	False	CATAAA	-9	NA	227788522	227792179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227788900_227789104
transcript_10251.known	chr1	+	578	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1379.53200760258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGCACTCACTACGC	228053272	True	NA	NA	False	NA	NA	NA	228082790	228097894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_10256.known	chr1	+	820	5	FSM	ENSG00000143761.16	ENST00000470558.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1114.55675046181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTGTTTCCAATGA	228053270	True	NA	NA	False	NA	NA	NA	228082788	228098188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_10258.known	chr1	+	678	5	FSM	ENSG00000143761.16	ENST00000469235.5	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1227.26077098553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGCGACGGGCTCTAT	228083109	False	NA	NA	False	NA	NA	NA	228083149	228097948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228083310_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_10260.known	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1992	junction_1	381.618919866403	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	228053189	True	NA	17	True	AATAAA	-18	NA	228082707	228099212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_10261.known	chr1	-	1290	8	FSM	ENSG00000143793.13	ENST00000272139.5	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_4	31.5413560719437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097944	True	NA	-8	True	AATAAA	-17	NA	228103325	228100730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_10262.nnic	chr1	-	1139	7	NIC	ENSG00000143793.13	novel	1290	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	125.919837815793	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097944	True	NA	-8	True	AATAAA	-17	NA	228103325	228100730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228103133
transcript_10269.known	chr1	-	864	6	FSM	ENSG00000162910.19	ENST00000430433.5	864	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	278.022732883482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTCTGTCTCCCCA	-228105245	True	NA	0	True	NA	NA	NA	228109312	228106679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228107976_228108085_228108234_228108319_228108954_228109022_228109148
transcript_1027.known	chr1	-	2796	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	47.9402840347586	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089838	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_10274.nic	chr1	-	821	6	NIC	ENSG00000162910.19	novel	665	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	270.480609286507	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-228109336	True	NA	-7	True	NA	NA	NA	228109346	228106686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
transcript_10275.known	chr1	-	665	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	308.30180018936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-228105232	True	NA	-7	True	NA	NA	NA	228109299	228106686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
transcript_10286.known	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	317.917442113515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105239	True	NA	1	True	NA	NA	NA	228109306	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
transcript_10287.known	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	321.706679290313	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
transcript_1029.nic	chr1	-	2823	25	NIC	ENSG00000171824.14	novel	2796	25	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	126.026555567997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089850	True	NA	NA	False	ATTAAA	-17	NA	11099881	11066617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070989_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_10290.nic	chr1	-	1301	5	NIC	ENSG00000162910.19	novel	1423	6	NA	NA	-34	0	intron_retention	FALSE	canonical	3	135	junction_3	248.295187226817	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-228109336	True	NA	-7	True	NA	NA	NA	228109346	228106686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228109022_228109148
transcript_10292.known	chr1	-	738	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	211.354412066557	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-228105232	True	NA	-5	True	NA	NA	NA	228109299	228106684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
transcript_10293.known	chr1	-	632	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	257.405322400295	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
transcript_10294.known	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	286.329646852481	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105216	True	NA	1	True	NA	NA	NA	228109283	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
transcript_10295.known	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	314.774345982783	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
transcript_103.known	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2745	junction_1	217	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_3826_3966_4480_4687
transcript_10306.known	chr1	-	990	4	FSM	ENSG00000162910.19	ENST00000366734.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	326.7438684284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108887	False	NA	1	True	NA	NA	NA	228108897	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436
transcript_10307.known	chr1	-	726	5	FSM	ENSG00000162910.19	ENST00000366744.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	349.664839524937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105213	True	NA	1	True	NA	NA	NA	228109280	228106678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108440_228108509_228109148
transcript_10312.known	chr1	+	1100	9	FSM	ENSG00000143774.17	ENST00000312726.9	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	424.94306603944	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGGAATGTGGCC	228125266	True	NA	NA	False	AATAAA	-25	NA	228140278	228148951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10315.known	chr1	+	1065	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	535.069840651667	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	228125277	True	NA	NA	False	AATAAA	-20	NA	228140289	228148946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10319.known	chr1	+	937	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	477.416174926691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	228139949	False	NA	NA	False	NA	NA	NA	228139961	228148840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10323.known	chr1	+	656	8	FSM	ENSG00000143774.17	ENST00000453943.5	656	8	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_1	198.594654345715	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGCTTGCTGTCTGT	228125285	True	NA	NA	False	AAGAAA	-16	NA	228140297	228148691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10329.known	chr1	+	7828	3	FSM	ENSG00000181873.13	ENST00000366711.4	7828	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTACGGGCTCTATGGTG	228164941	True	NA	7	True	AATAAA	-18	NA	228165803	228182257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228166158_228174691_228175030_228175121
transcript_1033.nnic	chr1	-	748	7	NNC	ENSG00000171824.14	novel	2721	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	250.790361767664	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089850	True	NA	NA	False	ATTAAA	-17	NA	11099881	11066617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_11066749_11068007_11068072_11091153_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_10330.known	chr1	-	895	1	FSM	ENSG00000181218.6	ENST00000366695.3	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGCACTTTAATTCT	-228443675	True	NA	-14	True	ATTAAA	-19	NA	228457873	228456978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228457000_228457900
transcript_10331.known	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6530840319978	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	229267413	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_10333.known	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	196.438692726255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	229267496	False	NA	-84	True	NA	NA	NA	229271193	229303894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_10334.known	chr1	+	2799	6	FSM	ENSG00000168118.12	ENST00000618010.4	2799	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	239.286940721804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGTAATTTGTAC	229267364	True	NA	NA	False	TTTAAA	-27	NA	229271061	229305891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_10336.known	chr1	-	1491	7	FSM	ENSG00000143632.15	ENST00000366684.7	1491	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	4.05859855396197	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	-229433966	True	NA	0	True	ATTAAA	-24	NA	229434094	229431244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_10337.known	chr1	-	5208	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_19	40.4009108808205	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAATAATTTTTTCT	-229502774	True	NA	-1	True	AGTAAA	-19	NA	229508341	229440258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_1034.known	chr1	+	440	2	FSM	ENSG00000230337.2	ENST00000435388.2	685	2	245	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATACTTGCTTTTCACT	11099516	False	NA	NA	False	AATAAA	-21	NA	11099674	11102100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11099815_11101800
transcript_10341.known	chr1	-	779	6	FSM	ENSG00000069248.12	ENST00000366678.4	779	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.243363828062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGAATGGCTGAAGC	-229502759	True	NA	NA	False	AAGAAA	-42	NA	229508326	229499166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_229499221_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_10344.known	chr1	+	4423	16	FSM	ENSG00000143641.10	ENST00000366672.5	4423	16	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	29.2980090336073	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTCTTTGCTGGCCAG	230063895	True	NA	30	True	AATAAA	-19	NA	230067237	230282122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230067407_230178217_230178312_230203136_230203291_230236013_230236113_230236352_230236421_230236659_230236726_230243305_230243428_230246062_230246151_230249183_230249272_230250456_230250561_230255217_230255345_230262572_230262666_230262921_230263006_230265240_230265368_230274444_230274565_230279302
transcript_10347.known	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_14	39.1794734761522	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	230639865	True	NA	8	True	AATAAA	-15	NA	230642566	230693982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
transcript_1035.nic	chr1	-	1086	6	ISM	ENSG00000198793.13	ENST00000361445.9	8721	58	3	147176	3	-114757	5prime_fragment	FALSE	canonical	3	173	junction_5	18.6397424874916	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCAGATAGCAGCAAG	-11254218	True	NA	NA	False	AATAAA	-14	NA	11262548	11253710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259424_11262444
transcript_10356.known	chr1	+	991	6	FSM	ENSG00000173409.14	ENST00000450711.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	67.5810624361588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCTTTTGTTTCTACTT	230976800	True	NA	NA	False	NA	NA	NA	230979115	230999803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_230999622
transcript_10357.known	chr1	+	1428	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	12.0896650077659	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	230976778	True	NA	NA	False	AATAAA	-18	NA	230979093	231000733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_1036.known	chr1	+	3654	2	FSM	ENSG00000120942.14	ENST00000376810.6	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGGTCTGGCTTCTGGT	11271610	True	NA	14	True	ATTAAA	-23	NA	11273197	11288434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11274061_11285643
transcript_10363.nnic	chr1	+	1029	4	NIC	ENSG00000173409.14	novel	1170	5	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81.3265024453898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTAAATTTTCAATT	230976765	True	NA	20	True	AATAAA	-20	NA	230979080	231000595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_230979280_230995759_230995985_230997120_230997268_231000137
transcript_10365.known	chr1	+	1170	5	FSM	ENSG00000173409.14	ENST00000366658.6	1170	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	70.414842185437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTAAATTTTCAATT	230976778	True	NA	20	True	AATAAA	-20	NA	230979093	231000595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230979280_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_10367.known	chr1	-	1432	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	28.4648906549806	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-231239816	True	NA	-3	True	AATAAA	-17	NA	231241178	231223762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_10368.known	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	31.0559530882925	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-231239813	True	NA	-5	True	AATAAA	-15	NA	231241175	231223764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_10369.known	chr1	-	795	6	FSM	ENSG00000143633.13	ENST00000451322.1	795	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	64.0468578464237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAACAACTGAGTCAAC	-231239728	True	NA	NA	False	AATAAA	-7	NA	231241090	231224254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231238856_231239189_231241023
transcript_10371.known	chr1	-	2657	2	FSM	ENSG00000143633.13	ENST00000471936.1	2657	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCTTCAAATGTCT	-231239825	True	NA	NA	False	CATAAA	-17	NA	231241187	231236695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231239189_231241023
transcript_10375.known	chr1	+	2641	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_8	40.1760569936319	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGAAAGAGATATTT	231235898	True	NA	88	True	ATTAAA	-18	NA	231241211	231277973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_10382.nic	chr1	+	2293	15	NIC	ENSG00000116906.13	novel	2641	16	NA	NA	-6	-136	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	108.67365957634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCAGCTCATTTCA	231235887	True	NA	24	True	AATAAA	-24	NA	231241200	231277797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_10390.known	chr1	+	3223	5	FSM	ENSG00000010072.16	ENST00000295050.12	3223	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	7.17635004720366	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTATATTATGTTC	231337393	True	NA	NA	False	AATAAA	-17	NA	231338292	231355023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303_231351572_231352609
transcript_10397.known	chr1	+	3559	4	FSM	ENSG00000010072.16	ENST00000391858.8	3559	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTTGACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	231337103	231353132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303
transcript_10400.known	chr1	+	603	2	FSM	ENSG00000010072.16	ENST00000492437.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAGGCTTCTAGGG	231337395	True	NA	NA	False	AGTAAA	-12	NA	231338294	231340061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231338605_231339768
transcript_10402.known	chr1	+	2634	6	FSM	ENSG00000116918.15	ENST00000366639.9	2634	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	26.026140705068	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTTTTGTTTGTTC	231524654	True	NA	NA	False	AATAAA	-21	NA	231528668	231566524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127_231561256_231564527
transcript_10404.nic	chr1	+	633	5	ISM	ENSG00000116918.15	ENST00000366639.9	2634	6	-22	5295	-20	0	5prime_fragment	FALSE	canonical	3	205	junction_2	26.6739573366983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAATGGGAAAGAAAAT	231524632	True	NA	NA	False	AATAAA	-20	NA	231528646	231561229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127
transcript_10405.known	chr1	-	2172	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	9.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAATCTTTTCTTTTT	-231527710	True	NA	NA	False	TATAAA	-28	NA	231528604	231520728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231522638_231527337_231527416_231528419
transcript_10406.known	chr1	-	280	2	FSM	ENSG00000233461.6	ENST00000416221.6	280	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGAATAGCTTGTTAT	-231527623	True	NA	-7	True	AATAAA	-22	NA	231528517	231522455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231522638_231528419
transcript_10407.known	chr1	-	1428	2	FSM	ENSG00000233461.6	ENST00000666601.1	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGACTCTGAATGAAGC	-231527702	True	NA	NA	False	NA	NA	NA	231528596	231526164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231527416_231528419
transcript_10408.known	chr1	-	416	4	FSM	ENSG00000233461.6	ENST00000440665.5	416	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.2842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTTGGGAATAGCTT	-231527361	False	NA	-12	True	AATAAA	-17	NA	231528255	231522460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231522638_231527337_231527416_231527765_231527793_231528121
transcript_1042.nnic	chr1	+	1834	9	NNC	ENSG00000132879.14	novel	3320	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	8	junction_7	81.3809521632673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTCGGGTATTT	11653176	True	NA	NA	False	ATTAAA	-19	NA	11654865	11663324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658629_11658735_11658872_11661129_11661309_11662624_11662732_11662815_11662929_11663141
transcript_10424.known	chr1	+	6324	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	0	0	0	0	multi-exon	FALSE	canonical	3	1435	junction_3	45.5686295602578	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	232944432	True	NA	8	True	TATAAA	-16	NA	232950610	232983882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
transcript_10430.known	chr1	+	980	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	690.689188821973	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	232944435	True	NA	-23	True	AAGAAA	-31	NA	232950613	232978751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
transcript_10436.known	chr1	+	767	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	626.91360382964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	232944426	True	NA	-34	True	NA	NA	NA	232950604	232978482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
transcript_10447.known	chr1	+	882	3	FSM	ENSG00000135778.12	ENST00000496662.5	882	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTAGGTCATCTCCCC	232944454	True	NA	-1	True	AAGAAA	-2	NA	232950632	232978722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232969908_232970119_232978162
transcript_10451.known	chr1	+	1762	5	FSM	ENSG00000135778.12	ENST00000366627.4	1762	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	653.670597472458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGAACTCTTTGTT	232944461	True	NA	5	True	AATAAA	-17	NA	232950639	232977528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232976341
transcript_10452.known	chr1	+	2061	3	FSM	ENSG00000135750.15	ENST00000366621.8	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	13	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGCTTTCATATATCA	233613143	True	NA	17	True	AATAAA	-23	NA	233614105	233672514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_233614527_233666594_233666991_233671270
transcript_10454.known	chr1	-	1723	2	FSM	ENSG00000233332.1	ENST00000412483.1	1723	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTTGTTATCTCGTT	-234215049	True	NA	NA	False	CATAAA	-32	NA	234215088	234212605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_234214108_234214867
transcript_10457.known	chr1	+	697	3	FSM	ENSG00000168275.16	ENST00000619305.1	697	3	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_2	4.5	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTTGTT	234365152	True	NA	15	True	AGTAAA	-20	NA	234373467	234384048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_234373679_234374229_234374390_234383722
transcript_10459.known	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	313.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	234373668	False	NA	12	True	AGTAAA	-17	NA	234373682	234384045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_234373841_234374229_234374390_234383722
transcript_10462.known	chr1	+	1013	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	234373686	False	NA	13	True	AGTAAA	-18	NA	234373700	234384046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_234374390_234383722
transcript_10463.known	chr1	-	1650	8	FSM	ENSG00000059588.10	ENST00000462259.5	1650	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	54.2631532065578	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTCCTTTAATAAAATAT	NA	False	NA	1	True	AATAAA	-20	NA	234406380	234391377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902
transcript_1047.nnic	chr1	+	1421	8	NNC	ENSG00000132879.14	novel	769	6	NA	NA	-1	0	intron_retention	FALSE	canonical	2	17	junction_6	83.00897418905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTCGGGTATTT	11654805	False	NA	NA	False	ATTAAA	-19	NA	11654855	11663324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_11654953_11655805_11656101_11658266_11658629_11658735_11658872_11661129_11661309_11662624_11662681_11662815_11662929_11663141
transcript_10478.known	chr1	-	3283	5	FSM	ENSG00000173726.11	ENST00000366607.5	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	69.5678625516122	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTGGCGTATGTTT	-235113295	True	NA	-22	True	ATTAAA	-15	NA	235128837	235109340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235112109_235113767_235113911_235119817_235119900_235122325_235122373_235128594
transcript_10485.known	chr1	-	3823	20	FSM	ENSG00000054267.22	ENST00000491632.5	3823	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	26.8457169912749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCACTAGGACAAATACC	-235324092	True	NA	NA	False	AATAGA	-12	NA	235328168	235177615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_10492.known	chr1	-	5811	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	30.2116500981474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTCTAAAAGATTT	-235324143	True	NA	1	True	AATAAA	-25	NA	235328219	235166894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_10496.known	chr1	-	3463	17	FSM	ENSG00000054267.22	ENST00000474953.5	3463	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	301.798198045896	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTTGAGTTTTATA	NA	False	NA	-4	True	AATAAA	-34	NA	235194077	235131633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173_235161458_235168543_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012
transcript_10498.known	chr1	-	2315	11	FSM	ENSG00000054267.22	ENST00000466653.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	11.7575507653593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-235324141	True	NA	NA	False	NA	NA	NA	235328217	235228310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_10502.known	chr1	-	1847	11	FSM	ENSG00000188739.15	ENST00000408888.8	1847	11	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_8	40.6674316867933	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	-235149486	True	NA	0	True	ATTAAA	-19	NA	235161250	235131182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_10505.nic	chr1	-	1267	10	NIC	ENSG00000188739.15	novel	1847	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	232.488682852136	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCGTCTGCTATTCAT	-235149509	True	NA	-19	True	AATAAA	-19	NA	235161273	235131648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160892_235161068_235161173
transcript_10506.known	chr1	-	1273	10	FSM	ENSG00000188739.15	ENST00000447801.5	1273	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	225.478147636813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTATTATCTGCTGATA	-235149456	True	NA	32	True	AATAAA	-1	NA	235161220	235131666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_10509.known	chr1	-	881	5	FSM	ENSG00000188739.15	ENST00000476261.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	32.5067300724019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGCCTGCAATGTACT	-235149468	True	NA	NA	False	AATAAA	-15	NA	235161232	235152487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_10510.known	chr1	-	409	4	FSM	ENSG00000188739.15	ENST00000485019.1	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	351.66872037315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAACCTCCGCTTCCCAG	-235149452	True	NA	NA	False	NA	NA	NA	235161216	235160194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235160249_235160510_235160648_235160892_235161068_235161173
transcript_10512.nic	chr1	+	1697	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-10	3687	1	10	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTGACAACCAACTAATAA	235363348	True	NA	-31	True	NA	NA	NA	235367416	235448756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10513.nic	chr1	+	1893	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-10	3491	1	0	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	235363348	True	NA	2	True	AATAAA	-2	NA	235367416	235448952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10515.nnic	chr1	+	1933	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	12	126	-1	0	multi-exon	FALSE	canonical	3	13	junction_1	46.3369115824523	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	235363356	True	NA	2	True	AATAAA	-2	NA	235367424	235448952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1052.nic	chr1	+	1934	7	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	80.1243824729194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653175	True	NA	17	True	AATAAA	-18	NA	11654864	11662291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_10520.known	chr1	+	2895	4	FSM	ENSG00000152904.11	ENST00000282841.9	2895	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	56.7802782663136	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	235323305	True	NA	8	True	ATTAAA	-24	NA	235328569	235344532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235328779_235335241_235335335_235341707_235341779_235342010
transcript_10521.nnic	chr1	+	2989	4	NIC	ENSG00000152904.11	novel	2895	4	NA	NA	169	0	intron_retention	FALSE	canonical	0	0	junction_1	178.146007533147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTATCCATACACT	235328736	False	NA	13	True	AATAAA	-16	NA	235328758	235343093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_235330501_235335241_235335335_235341707_235341779_235342010
transcript_10522.known	chr1	+	1407	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	192	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	235323306	True	NA	58	True	NA	NA	NA	235328570	235343138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235328779_235341707_235341779_235342010
transcript_10524.known	chr1	+	5374	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGAAGATCCTCATTCT	235363358	True	NA	NA	False	ATTAAA	-19	NA	235367426	235452443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10526.known	chr1	+	1897	17	FSM	ENSG00000284770.2	ENST00000646286.1	1897	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.6654551808769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	235363361	True	NA	-18	True	NA	NA	NA	235367429	235448932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235413875_235413998_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1053.known	chr1	+	3320	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	72.2905019118464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11654806	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_10530.known	chr1	+	1779	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	49.5441441769077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	235363361	True	NA	-10	True	NA	NA	NA	235367429	235448940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10532.known	chr1	+	1801	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.8643453476129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	235363354	True	NA	1	True	AATAAA	-1	NA	235367422	235448951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10536.known	chr1	+	1683	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	50.6653687624667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363361	True	NA	-6	True	NA	NA	NA	235367429	235448944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1054.known	chr1	+	959	6	FSM	ENSG00000132879.14	ENST00000376768.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	83.0002409635056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTCTTCTTTGTGG	11653191	True	NA	NA	False	NA	NA	NA	11654880	11661391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658532_11658629_11658735_11658872_11661129
transcript_10545.known	chr1	+	2102	18	FSM	ENSG00000284770.2	ENST00000646536.1	2102	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	70.9807225645002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363361	True	NA	-6	True	NA	NA	NA	235367429	235448944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438927_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10546.known	chr1	-	4897	4	FSM	ENSG00000168243.11	ENST00000391854.7	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	16.2138486760204	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	-235649766	False	2015	-10	True	AATAAA	-24	NA	235649784	235547684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235649661
transcript_10549.nnic	chr1	-	1122	3	NNC	ENSG00000116962.15	novel	5792	20	NA	NA	-24	-70226	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	82	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCGGTTGAATATGTTA	-236061619	True	NA	-1	True	AATAAA	-16	NA	236065133	236046055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_236046599_236048689_236048990_236064854
transcript_1055.known	chr1	+	2928	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	65.6219475480574	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11653187	True	NA	NA	False	ATTAAA	-22	NA	11654876	11663327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_10550.known	chr1	-	4994	16	FSM	ENSG00000086619.15	ENST00000354619.10	4994	16	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_11	8.06804395955633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTATTTAATTTTTT	-236281261	True	NA	NA	False	ATTAAA	-45	NA	236281958	236215100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_236218577_236220831_236220966_236221923_236222011_236225069_236225140_236226268_236226516_236226646_236226740_236230223_236230251_236232827_236232840_236235788_236235836_236236277_236236399_236243421_236243496_236249884_236249968_236252049_236252092_236253421_236253506_236269874_236269995_236281681
transcript_10552.known	chr1	+	3116	6	FSM	ENSG00000186197.15	ENST00000359362.6	3116	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	8.93532316147547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGTTGGTTTATT	236394810	True	NA	22	True	AAAAAG	-45	NA	236395412	236484930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236395661_236409215_236409275_236414259_236414300_236427391_236427451_236468230_236468277_236482266
transcript_10554.nic	chr1	-	2359	17	ISM	ENSG00000119285.11	ENST00000366581.6	6538	44	-35	34386	-23	10715	5prime_fragment	FALSE	canonical	3	293	junction_13	41.6135025412425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGCTTGAAAGTGTC	-236593505	True	NA	NA	False	NA	NA	NA	236604539	236585056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_10555.known	chr1	+	6281	12	FSM	ENSG00000116977.19	ENST00000450372.6	6281	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.5094513376755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	NA	False	NA	NA	False	AATAAA	-32	NA	236523438	236552981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236523625_236523969_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236542914_236543041_236543559_236543649_236544749_236544916_236548011
transcript_10559.known	chr1	+	2437	11	FSM	ENSG00000116977.19	ENST00000341872.10	2437	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7162336455017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAATGGTTCCATTTCTG	NA	False	NA	19	True	ATTAAA	-20	NA	236523438	236549263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236523625_236523969_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_1056.known	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.2836118333013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	11653220	True	NA	NA	False	NA	NA	NA	11654909	11661349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_10561.known	chr1	+	5957	10	FSM	ENSG00000116977.19	ENST00000366584.9	5957	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	8.18007214191376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	236523407	True	NA	NA	False	AATAAA	-32	NA	236523981	236552981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_10565.nic	chr1	-	651	2	ISM	ENSG00000119285.11	ENST00000366579.1	793	3	-51	770	-23	-770	5prime_fragment	FALSE	canonical	3	478	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCCCTGCCACGAAG	-236593505	True	NA	NA	False	NA	NA	NA	236604539	236603594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_236604128_236604421
transcript_10566.known	chr1	-	1457	1	FSM	ENSG00000223776.5	ENST00000487567.2	1457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTGTTAGGGACC	-236524474	True	NA	-1	True	NA	NA	NA	236524508	236523051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_236523100_236524500
transcript_10567.known	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_41	58.7743751087282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-236593482	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_10568.known	chr1	+	370	1	FSM	ENSG00000237991.3	ENST00000450819.1	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCACGTTGTCAATAAAG	236981250	False	NA	NA	False	NA	NA	NA	236981338	236981708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236981300_236981700
transcript_10569.known	chr1	-	1061	3	FSM	ENSG00000215808.4	ENST00000649127.1	1061	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	43	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCATTGTTGGTCAAATT	-238485086	True	NA	NA	False	AATAAA	-29	NA	238486044	238476541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_238476818_238481156_238481682_238485784
transcript_10570.known	chr1	-	1536	2	FSM	ENSG00000215808.4	ENST00000648241.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	-238485080	True	NA	-8	True	AATAAA	-28	NA	238486038	238480372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_238481682_238485811
transcript_10571.known	chr1	-	1585	2	FSM	ENSG00000215808.4	ENST00000657655.1	1585	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	-238485102	True	NA	-8	True	AATAAA	-28	NA	238486060	238480372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_238481682_238485784
transcript_10573.nic	chr1	+	848	4	ISM	ENSG00000133019.12	ENST00000255380.8	8780	5	-41	88027	-41	-59171	5prime_fragment	FALSE	canonical	3	10	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGAATGGACAAATTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	239629031	239827425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_239629540_239632223_239632287_239678185_239678289_239827251
transcript_10574.nic	chr1	+	571	2	ISM	ENSG00000133019.12	ENST00000255380.8	8780	5	-41	283166	-41	26079	5prime_fragment	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCCTTTTTCTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	239629031	239632286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_239629540_239632223
transcript_10579.known	chr1	-	1791	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_9	72.9339291735428	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCTATGTTAATTGA	-241514336	True	NA	-14	True	AATAAA	-37	NA	241519755	241497602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_1058.nic	chr1	+	2150	6	NIC	ENSG00000132879.14	novel	1734	5	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	73.413895142541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653176	True	NA	17	True	AATAAA	-18	NA	11654865	11662291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_1059.nic	chr1	+	2414	6	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	47	junction_1	70.2783039066823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653176	True	NA	17	True	AATAAA	-18	NA	11654865	11662291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_10590.nic	chr1	+	3306	16	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_2	34.8632885552825	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	241844762	True	NA	16	True	AATACA	-19	NA	241848156	241889746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_241848354_241848730_241849028_241849108_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_10591.nic	chr1	+	3198	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	28.4529687127974	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	241844762	True	NA	16	True	AATACA	-19	NA	241848156	241889746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_10592.known	chr1	-	1207	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1.88561808316413	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGGGCTCGGTACTAG	-241999056	True	NA	NA	False	NA	NA	NA	241999098	241995489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
transcript_10593.known	chr1	-	8900	10	FSM	ENSG00000180287.17	ENST00000536534.7	8900	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.55691036764664	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCTGTGTGTCTGTTCT	-242524617	True	NA	NA	False	AATAAA	-16	NA	242524697	242082985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_242090111_242100667_242100783_242107670_242107840_242113889_242114027_242124467_242124666_242219987_242220116_242265336_242265449_242288361_242288531_242348105_242348243_242524087
transcript_10600.known	chr1	-	608	4	FSM	ENSG00000143702.16	ENST00000522995.1	608	4	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	66.7149824918578	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATATGATATCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	243255348	243211894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255046
transcript_10601.known	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	51.8095394083215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	NA	False	NA	12	True	AATAAA	-16	NA	243256040	243500091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_10607.nnic	chr1	+	1723	10	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	-29	1627	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	17.1514675612955	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTATTCAATTCTGC	NA	False	NA	1	True	AATAAA	-14	NA	243256004	243318522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243318036
transcript_1061.known	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	91.4668655853036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	NA	False	NA	15	True	AATAAA	-16	NA	11654374	11662289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_10615.nnic	chr1	+	681	4	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	54.3016267405192	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	243485376	True	NA	12	True	AATAAA	-16	NA	243487753	243500091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243487879_243489013_243489141_243497866_243497960_243499755
transcript_10618.known	chr1	+	525	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	50	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	243485437	True	NA	10	True	AATAAA	-14	NA	243487814	243500089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_243487879_243489013_243489141_243499755
transcript_10619.nnic	chr1	+	532	3	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	104.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	243485375	True	NA	12	True	AATAAA	-16	NA	243487752	243500091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243487822_243489013_243489141_243499755
transcript_10620.nnic	chr1	+	232	2	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	2189	-264	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACATTCATCTGGTTT	243487626	False	NA	8	True	AATAAA	-16	NA	243490003	243499825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243490166_243499755
transcript_10622.known	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_9	39.0941704946744	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	-244444397	True	NA	-3	True	ATTAAA	-21	NA	244451909	244408493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
transcript_10626.known	chr1	+	4017	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_3	48.7801189010441	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	244638563	True	NA	NA	False	ATTAAA	-19	NA	244653125	244709033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
transcript_10627.known	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	933	junction_13	1074.42639712557	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-244759756	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_1063.known	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	59.721750644133	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653220	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_10630.known	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	749.468195715394	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	-244863040	False	NA	-40	True	AAGAAA	-37	NA	244863106	244853405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
transcript_10637.known	chr1	+	568	5	FSM	ENSG00000203667.10	ENST00000366528.3	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	917.897325412815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAAGTAAATAAAGTTT	244835537	False	NA	-6	True	CATAAA	-24	NA	244835615	244843252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244835757_244836484_244836521_244841943_244842059_244842194_244842259_244843040
transcript_10639.known	chr1	+	2290	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	860.254355150589	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	244820729	True	NA	NA	False	AATAAA	-17	NA	244835658	244845057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
transcript_1064.nic	chr1	+	2052	5	NIC	ENSG00000132879.14	novel	1734	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	124	junction_3	50.3853897474258	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11654805	False	NA	17	True	AATAAA	-18	NA	11654855	11662291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_11654953_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_10648.known	chr1	+	1005	3	FSM	ENSG00000203667.10	ENST00000391839.6	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	845	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAATATTATTTAAAA	244820726	True	NA	93	True	NA	NA	NA	244835655	244843880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244835757_244842194_244842259_244843040
transcript_1065.nic	chr1	-	909	5	ISM	ENSG00000116661.11	ENST00000354287.5	1287	6	3862	0	146	0	3prime_fragment	FALSE	canonical	3	359	junction_4	16.6639581132455	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	-11650504	False	14	-37	True	AATAAA	-19	NA	11650567	11648386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465
transcript_10652.known	chr1	+	860	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	57.3695503392039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTTATTTAAAAAC	244968517	True	NA	NA	False	TTTAAA	-36	NA	244970355	245087556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10655.known	chr1	+	6167	8	FSM	ENSG00000203666.13	ENST00000366522.6	6167	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65.1885804448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTAGGGAAGTTTTT	244969969	False	NA	NA	False	AGTAAA	-7	NA	244969981	245127164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_10657.nic	chr1	+	1017	7	NIC	ENSG00000203666.13	novel	860	8	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	64.3782226809311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244968558	True	NA	11	True	AATAAA	-14	NA	244970396	245087839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_244970444_245002120_245002233_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10659.known	chr1	+	906	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	48.6028805730689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	244968512	True	NA	18	True	AATGAA	-37	NA	244970350	245087794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_1066.known	chr1	+	1444	6	FSM	ENSG00000116663.11	ENST00000376753.9	1444	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.48193472919817	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGGGTTGGTTTTA	11664104	True	NA	NA	False	AATAAA	-30	NA	11664199	11674354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11664256_11668655_11668945_11671265_11671393_11671927_11672024_11673276_11673413_11673614
transcript_10661.known	chr1	+	1201	6	FSM	ENSG00000203666.13	ENST00000497591.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	69.1791876217118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAATCACTTCAATGT	244970275	False	NA	22	True	AATAAA	-35	NA	244970285	245091806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
transcript_10662.known	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	66.0623947492066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	244968551	True	NA	14	True	CATAAA	-15	NA	244970389	245122991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_10666.known	chr1	+	1233	8	FSM	ENSG00000203666.13	ENST00000366523.6	1418	8	187	-2	-113	2	multi-exon	FALSE	canonical	2	4	junction_1	56.9353374720939	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244969837	False	NA	11	True	AATAAA	-14	NA	244969868	245087839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970044_244970328_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10667.known	chr1	-	1565	12	FSM	ENSG00000185420.19	ENST00000490107.6	1565	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.6821912908413	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTGGTAATTGTCTT	-246503519	True	NA	-11	True	AATAAA	-22	NA	246507279	245749346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_245749665_245764040_245764150_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869_245929938_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
transcript_10671.known	chr1	-	1784	8	FSM	ENSG00000162851.8	ENST00000366514.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	16.3132599127088	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562898	True	NA	NA	False	ATTAAA	-17	NA	246566261	246540560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
transcript_10673.nnic	chr1	-	1682	7	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	54.1984522124223	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562950	True	NA	NA	False	ATTAAA	-17	NA	246566313	246540560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246564345_246564435_246565825
transcript_10676.nnic	chr1	-	1533	6	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	57.7359506720033	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562950	True	NA	NA	False	ATTAAA	-17	NA	246566313	246540560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246564345_246564435_246565825
transcript_10678.nnic	chr1	+	1412	13	NNC	ENSG00000143653.10	novel	2141	12	NA	NA	3	-666	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	60.5328193810781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGATTTTGTGATT	246721470	True	NA	34	True	ATTAAA	-38	NA	246724411	246767471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_246724516_246724575_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_10683.known	chr1	+	2141	12	FSM	ENSG00000143653.10	ENST00000366510.4	2141	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	25.7681974534503	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGTTCATTACCTAA	246721467	True	NA	NA	False	AATAAA	-19	NA	246724408	246768137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_10688.nic	chr1	-	1881	4	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	80545	1441	-969	423	3prime_fragment	FALSE	canonical	3	271	junction_2	9.0921211313239	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTCTTGGATTTTTG	-246850806	False	NA	-1	True	AATAAA	-18	NA	246850818	246840538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614
transcript_10694.known	chr1	-	826	6	FSM	ENSG00000197472.15	ENST00000487338.6	826	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	76.5365272272005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTATTTCTGATGAATA	-247003279	True	NA	-40	True	ATTAAA	-15	NA	247008093	246945674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246945828_246967694_246967793_246988124_246988256_246999347_246999441_246999911_247000075_247007905
transcript_10696.known	chr1	-	885	6	FSM	ENSG00000197472.15	ENST00000479214.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.6182082145441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTTTCTTTTTT	-247003242	True	NA	88	True	AATAGA	-20	NA	247008056	246945546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_107.known	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1354	junction_6	995.470804418181	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
transcript_10703.nnic	chr1	-	824	5	NIC	ENSG00000197472.15	novel	885	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	69.7656792413003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAATTTTCTTTTTTA	-247003242	True	NA	89	True	AATAGA	-21	NA	247008056	246945545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_246945828_246988120_246988256_246999347_246999441_246999911_247000075_247007905
transcript_10704.nnic	chr1	-	792	5	NIC	ENSG00000197472.15	novel	885	6	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	69.9803543860704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAATTTTCTTTTTTA	-247003246	True	NA	89	True	AATAGA	-21	NA	247008060	246945545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_246945828_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_10710.nic	chr1	-	731	5	ISM	ENSG00000197472.15	ENST00000366504.6	862	6	-114	22112	-20	17662	5prime_fragment	FALSE	canonical	3	86	junction_1	47.5105251496971	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	-247003299	False	NA	NA	False	ATTAAA	-21	NA	247008113	246967660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
transcript_10711.nic	chr1	-	695	5	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	-57	22114	-20	17662	5prime_fragment	FALSE	canonical	3	86	junction_1	50.0324894443601	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	-247003299	False	NA	NA	False	ATTAAA	-21	NA	247008113	246967660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_10713.known	chr1	-	504	4	FSM	ENSG00000197472.15	ENST00000498046.2	504	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	37.0435179514881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATCTATTTCTGATGA	-247003212	True	NA	-43	True	ATTAAA	-12	NA	247008026	246945677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_247007905
transcript_10715.known	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	45.7116566704332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-247003243	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
transcript_10716.nic	chr1	-	2976	4	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	-3	40107	-2	-331	5prime_fragment	FALSE	canonical	3	96	junction_2	51.4220013439989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTTTAGACTGTTTG	-247003245	True	NA	-5	True	AATAAA	-19	NA	247008059	246985653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246988256_246999347_246999441_246999947_247000075_247007905
transcript_10721.nnic	chr1	-	2148	5	NNC	ENSG00000277462.2	novel	4197	4	NA	NA	-2	-2153	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	77.0162320553271	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGTATGTGAAGTTT	-247075985	True	NA	-20	True	AATAAA	-14	NA	247078813	247036789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247038428_247038809_247038871_247039410_247039538_247074799_247074902_247078593
transcript_10722.known	chr1	-	4197	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	17.5562587763516	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCCTTGAGTGTTTT	-247075983	True	NA	-2	True	NA	NA	NA	247078811	247034636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
transcript_10723.nnic	chr1	-	1757	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-44	1931	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4353490404331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGAGTTCTTTGCATT	-247101586	True	NA	-7	True	CATAAA	-19	NA	247104416	247098030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247098316_247100255_247101320_247101730_247101792_247101986_247102114_247104196
transcript_10726.known	chr1	-	1706	4	FSM	ENSG00000188295.15	ENST00000448299.7	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	5.35412613473634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCACATTGCAGTT	-247101526	True	NA	NA	False	AATAAA	-22	NA	247104356	247099961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247104196
transcript_10728.known	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.6599986661331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	-247101542	True	NA	NA	False	NA	NA	NA	247104372	247099990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
transcript_10731.known	chr1	-	1674	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	35.1093529798922	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGAGGTG	-247171877	True	NA	NA	False	AATATA	-18	NA	247172016	247155900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
transcript_10732.known	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	44.2894519672072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-247171881	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
transcript_10736.nnic	chr1	-	750	4	NNC	ENSG00000196418.13	novel	2243	4	NA	NA	-44	-671	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	56.3461523876199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGGTTGTCATTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	247172064	247157587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247157933_247159005_247159067_247159686_247159814_247171847
transcript_10737.known	chr1	-	2243	4	FSM	ENSG00000196418.13	ENST00000472531.5	2243	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.0911166455055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGCTATCCTTATATTT	-247171866	True	NA	-2	True	AATAAA	-16	NA	247172005	247121974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247123872_247159005_247159067_247159686_247159814_247171847
transcript_10738.known	chr1	-	1246	1	FSM	ENSG00000259865.1	ENST00000566446.1	1246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTGTGGTGAAAA	-247188515	False	NA	-3	True	ATTAAA	-24	NA	247188526	247187280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247187300_247188500
transcript_10741.nnic	chr1	-	1496	2	Fusion	ENSG00000227671.4_ENSG00000232347.1	novel	706	4	NA	NA	-27	2295	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGGATTCTTCAAAC	-247207705	True	NA	-16	True	AATAAA	-17	NA	247210883	247208395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_-_247209699_247210690
transcript_10742.known	chr1	-	1367	3	FSM	ENSG00000196772.5	ENST00000641093.1	1367	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTAATTACATTTTTC	-247824071	True	NA	NA	False	AAAAAG	-39	NA	247824119	247814659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247815745_247819062_247819178_247823952
transcript_10743.known	chr1	-	3148	7	FSM	ENSG00000175137.11	ENST00000366472.6	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	10.85382677011	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTGTCCTTGCTGGA	-248824308	True	NA	-1	True	AATAAA	-21	NA	248825915	248810445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_248812371_248812988_248813163_248814448_248814611_248816533_248816663_248816821_248816885_248824752_248825367_248825834
transcript_10747.nic	chr1	-	1765	12	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	70.2572604406698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857302	True	NA	-4	True	AATAAA	-15	NA	248858969	248850007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857437_248857827_248857860_248858130_248858322_248858917
transcript_10748.known	chr1	-	1942	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.6887682826575	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857418	True	NA	-4	True	AATAAA	-15	NA	248859085	248850007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_10770.known	chr1	+	2717	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCTGTTGTGCTAGCA	248904986	True	NA	8	True	ATTAAA	-16	NA	248906234	248919146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_248906343_248913815_248913880_248916601
transcript_10774.known	chr1	+	2879	3	FSM	ENSG00000185220.12	ENST00000355360.8	2879	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	21.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTGCATCCTCTGTCT	248904947	True	NA	NA	False	NA	NA	NA	248906195	248919946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_248906343_248913815_248913880_248917278
transcript_10777.nnic	chr1	+	800	4	Fusion	ENSG00000185220.12_ENSG00000233084.2	novel	2879	3	NA	NA	14	62	multi-exon	FALSE	canonical	3	5	junction_3	25.2234458831902	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTTTCATAAGAATG	248904961	True	NA	NA	False	CATAAA	-5	NA	248906209	248937105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_248906343_248913815_248913880_248930112_248930192_248936581
transcript_10778.known	chr10	+	4100	15	FSM	ENSG00000015171.20	ENST00000381604.9	4100	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	26.3113229292203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	134408	True	NA	23	True	AATAAA	-19	NA	135454	254637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_10779.known	chr10	+	4020	15	FSM	ENSG00000015171.20	ENST00000627286.2	4020	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	42.4461243152747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGTATTTAAAAAAA	134461	True	NA	-1	True	AATATA	-30	NA	135507	254613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240058_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_1078.known	chr1	-	864	9	FSM	ENSG00000116670.15	ENST00000376669.9	864	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_4	1131.75631625143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCCTCTGTGTGTGGAT	-11669686	True	NA	NA	False	NA	NA	NA	11681118	11674677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_10781.known	chr10	+	4656	17	FSM	ENSG00000107937.19	ENST00000360803.9	4656	17	0	0	0	0	multi-exon	FALSE	canonical	1	255	junction_14	133.385191738064	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTTCTTTGGTAAT	981154	True	NA	NA	False	AATAAA	-23	NA	988433	1019932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464_1012663_1014246_1014313_1015752_1015897_1017074
transcript_1079.known	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_4	1140.69657994578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-11691465	False	NA	-1	True	NA	NA	NA	11691477	11674524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_10801.known	chr10	-	3370	5	FSM	ENSG00000067064.12	ENST00000429642.2	3370	5	0	0	0	0	multi-exon	TRUE	canonical	2	45	junction_4	381.843554351779	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCTCCCTGGGGACA	-1035570	True	NA	NA	False	NA	NA	NA	1048883	1039151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048263
transcript_10802.known	chr10	-	2739	5	FSM	ENSG00000067064.12	ENST00000381344.8	2739	5	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_4	216.25722531282	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACTCCTTTAAG	-1048370	False	471	NA	False	AATATA	-23	NA	1049119	1039418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048863
transcript_10803.known	chr10	-	1066	4	FSM	ENSG00000067064.12	ENST00000491735.1	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_3	326.02283491941	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACATACTTATGGGAAA	-1048354	False	NA	-12	True	AATAAA	-19	NA	1049103	1040902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1048863
transcript_10812.known	chr10	-	3487	27	FSM	ENSG00000107959.17	ENST00000380989.6	3487	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	34.4304676208691	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGCTTGAGTCATTA	-3172827	False	NA	-3	True	AATAAA	-16	NA	3172841	3137729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148167_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10813.known	chr10	-	3277	26	FSM	ENSG00000107959.17	ENST00000676953.1	3277	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	34.920801823555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	-3167223	True	NA	-13	True	AATAAA	-6	NA	3172779	3137739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10814.known	chr10	-	3242	25	FSM	ENSG00000107959.17	ENST00000678436.1	3242	25	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	34.9622564346182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	-3172793	False	NA	-13	True	AATAAA	-6	NA	3172807	3137739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10816.known	chr10	+	2626	22	FSM	ENSG00000067057.18	ENST00000381125.9	2626	22	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	137.885357750873	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCTGTTTTAGTTTT	3057807	True	NA	31	True	ATTAAA	-20	NA	3067547	3136802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_3067708_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_10817.known	chr10	-	1814	15	FSM	ENSG00000107959.17	ENST00000678972.1	1814	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	40.9333081278036	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTAAATGTCACTCCTC	-3172793	False	NA	NA	False	NA	NA	NA	3172807	3151201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165524_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10818.nic	chr10	+	1885	3	ISM	ENSG00000067057.18	ENST00000381125.9	2626	22	-48	35925	-48	-677	5prime_fragment	FALSE	canonical	3	423	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCCCCTGGCCCCAG	3057759	True	NA	NA	False	TTTAAA	-38	NA	3067499	3100877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_3067708_3082387_3082462_3099274
transcript_10820.known	chr10	-	4590	4	FSM	ENSG00000067082.15	ENST00000497571.6	4590	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	20.9284495364563	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTACATCTCTTTTT	-3781943	True	NA	NA	False	AATAAA	-18	NA	3785209	3775995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3779591_3780105_3780230_3781640_3782215_3784912
transcript_10822.known	chr10	+	1613	10	FSM	ENSG00000165568.18	ENST00000298375.12	1613	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	2.72618758808562	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTAATTTCTTTT	4825820	True	NA	NA	False	AATAAA	-24	NA	4826206	4848062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4847147_4847231_4847487
transcript_10826.known	chr10	+	6543	9	FSM	ENSG00000187134.14	ENST00000380872.9	6543	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.09076704298839	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATGTTAAGAGGGTT	4963312	True	NA	NA	False	AATAAA	-16	NA	4963414	4983283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_4963529_4965913_4966082_4966926_4967044_4968308_4968387_4968821_4968945_4972200_4972311_4972583_4972750_4975850_4975934_4977699
transcript_10827.known	chr10	-	3756	9	FSM	ENSG00000151632.18	ENST00000380753.9	3215	9	-166	-375	0	375	multi-exon	FALSE	canonical	1	1	junction_7	5.37209223673607	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGCACAAGTGACTC	NA	False	NA	NA	False	TATAAA	-35	NA	5004023	4987399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_4990039_4991830_4991914_4995318_4995485_4995755_4995866_4998624_4998748_4999199_4999278_5000549_5000667_5001513_5001682_5003751
transcript_1083.known	chr1	-	1053	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_8	742.205149790137	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-11669716	True	NA	-20	True	AATAAA	-23	NA	11681148	11674479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_10831.nnic	chr10	+	1458	10	NIC	ENSG00000196139.14	novel	1405	9	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.6954455203834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5035154	True	NA	14	True	AATAAA	-21	NA	5035307	5107686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_5035617_5077899_5077978_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10832.nnic	chr10	+	1468	10	NNC	ENSG00000196139.14	novel	1405	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.9066812686365	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5035188	True	NA	14	True	AATAAA	-21	NA	5035341	5107686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_5035617_5077855_5077978_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10833.nic	chr10	+	1349	9	NIC	ENSG00000196139.14	novel	859	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	31.5792653492763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5035185	True	NA	14	True	AATAAA	-21	NA	5035338	5107686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_5035617_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10834.known	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_7	6.96419413859206	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5093970	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10835.known	chr10	-	1793	4	FSM	ENSG00000178462.12	ENST00000380419.8	1793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTTATTCTTCTTTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	5404828	5393100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5394462_5395326_5395476_5400843_5401088_5404789
transcript_10836.known	chr10	+	3989	12	FSM	ENSG00000173848.19	ENST00000355029.9	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	63.8880736163896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTGTTTGAGAGCAT	5408482	True	NA	NA	False	ATTAAA	-20	NA	5412556	5459056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5412821_5426654_5426722_5429169_5429230_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_10838.known	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	88.0670339521878	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	5443018	True	NA	16	True	ATTAAA	-23	NA	5446610	5458463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_10840.nic	chr10	+	1529	8	ISM	ENSG00000173848.19	ENST00000380359.3	3253	10	-33	3039	-31	902	5prime_fragment	FALSE	canonical	3	126	junction_1	97.6612220162859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAAGAGTTTATCTTAT	5442985	True	NA	NA	False	AATAAA	-21	NA	5446577	5455424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947
transcript_10842.known	chr10	-	874	1	FSM	ENSG00000178372.8	ENST00000380332.5	874	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTGGTGTTTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	5499570	5498696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5498700_5499600
transcript_10847.known	chr10	-	2297	11	FSM	ENSG00000057608.17	ENST00000380191.9	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_4	86.1605478162715	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGTGTTGGTTTGTG	-5766889	True	NA	-5	True	AATAAA	-19	NA	5813434	5765222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5794884_5795020_5796762_5796863_5800597_5800706_5813213
transcript_10849.known	chr10	-	1408	10	FSM	ENSG00000057608.17	ENST00000380181.7	1408	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	579.97594671282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATATAATGAAATCAATA	-5766866	True	NA	-30	True	TTTAAA	-14	NA	5813411	5765953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5796762_5796863_5800597_5800706_5813213
transcript_1085.known	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_8	758.718450744411	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	-11691597	False	NA	NA	False	CATAAA	-37	NA	11691609	11674747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_10852.known	chr10	-	1694	7	FSM	ENSG00000134470.21	ENST00000534292.5	1694	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.54405625374562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAATGCATTAAG	-5977955	True	NA	NA	False	AATAAA	-15	NA	5978045	5952385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5963742_5963842_5966144_5966340_5977776
transcript_10853.known	chr10	-	1581	6	FSM	ENSG00000134470.21	ENST00000532948.5	1581	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	3.86781592116274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAATATTTTTAAAATG	-5977948	False	NA	NA	False	AATAAA	-8	NA	5978038	5952392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5966144_5966340_5977776
transcript_10854.known	chr10	+	3275	12	FSM	ENSG00000134453.16	ENST00000379888.9	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	60.748499284256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTGGCAAGTTTCCGT	6079142	True	NA	NA	False	AATAAA	-25	NA	6089033	6117447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6112362_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_10856.known	chr10	+	927	5	FSM	ENSG00000134453.16	ENST00000476706.5	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	401.991604389942	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTGTTTCTCTTTT	6112639	False	NA	31	True	TATAAA	-33	NA	6112701	6115766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_10857.known	chr10	-	438	2	FSM	ENSG00000213994.3	ENST00000427630.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGAGCTTTTTGTGTAT	-6202673	True	NA	NA	False	AATAAA	-14	NA	6202693	6197611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_6197796_6202439
transcript_10858.known	chr10	-	3255	18	FSM	ENSG00000065675.16	ENST00000263125.10	3255	18	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	11.9560903679176	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	-6579075	True	NA	-5	True	AATAAA	-11	NA	6580276	6427147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_10859.known	chr10	+	1263	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6579459	False	NA	NA	False	AAAAAG	-28	NA	6580561	6584508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6580928_6582137_6582202_6583675
transcript_1086.nnic	chr1	-	1035	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-193	0	at_least_one_novel_splicesite	FALSE	canonical	3	862	junction_8	824.264672298892	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-11691831	False	NA	-20	True	AATAAA	-23	NA	11691843	11674479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
transcript_10860.nic	chr10	+	876	3	NIC	ENSG00000237943.8	novel	1263	3	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAGTGTCAATTT	6579373	True	NA	NA	False	AATAAA	-15	NA	6580475	6584298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_6580928_6583675_6583919_6584117
transcript_10861.known	chr10	+	1254	2	FSM	ENSG00000237943.8	ENST00000667809.1	1254	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTCCTCTTGGGGAG	6579453	True	NA	NA	False	NA	NA	NA	6580555	6584557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6580928_6583675
transcript_10870.nnic	chr10	+	499	4	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62926	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_3	13.2748718344933	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCACCGTGATTTATT	6799955	True	NA	10	True	AATACA	-20	NA	6800343	6840712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_6800440_6833642_6833689_6837973_6838009_6840390
transcript_10874.nnic	chr10	+	2155	3	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62870	-782	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTATAGCCCTCAGTTTG	6799899	True	NA	10	True	AATGAA	-19	NA	6800287	6839930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_6800440_6833642_6833689_6837973
transcript_10875.known	chr10	+	2529	2	FSM	ENSG00000223784.2	ENST00000650334.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTTTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	6737275	6740532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6737629_6738356
transcript_10882.known	chr10	-	6360	13	FSM	ENSG00000151657.12	ENST00000379562.9	6360	13	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_10	17.0299980426697	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATTACTCAGAAATGG	-7784554	True	NA	0	True	AATAAA	-21	NA	7787993	7750961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_10884.nnic	chr10	-	1414	12	NIC	ENSG00000151657.12	novel	6360	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	59.8844617603814	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAAAGTGTTTTATCTA	-7784555	True	NA	-31	True	ATTAAA	-8	NA	7787994	7755813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7787819
transcript_10888.nic	chr10	-	875	8	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-54	18291	-54	-8020	5prime_fragment	FALSE	canonical	3	181	junction_5	14.9325011915866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAAATCTGCAC	NA	False	NA	-37	True	AAGAAA	-2	NA	7788047	7769252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_10892.known	chr10	+	1096	9	FSM	ENSG00000165629.20	ENST00000493053.5	1096	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1285.63979694936	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765627	True	NA	NA	False	AATAAA	-16	NA	7788146	7807801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_10897.known	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	951.998495693386	3077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765657	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_10898.known	chr10	+	1078	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1313.22212872575	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATAAGAACAATAGATA	7765657	True	NA	NA	False	AATAAA	-30	NA	7788176	7807815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
transcript_10899.known	chr10	+	4875	7	FSM	ENSG00000165632.9	ENST00000344293.6	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	7817279	True	NA	9	True	AATAAA	-20	NA	7818504	8016631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7818876_7824317_7824561_7963919_7965743_7977240_7977324_8009077_8009331_8013730_8013838_8014636
transcript_10907.nic	chr10	+	2481	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	69	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	14.6076902823347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	11018007	False	NA	12	True	NA	NA	NA	11018034	11331277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_10908.known	chr10	+	1892	14	FSM	ENSG00000048740.19	ENST00000608830.5	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.3088347016304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGTCAATGTGAAA	11164385	True	NA	NA	False	NA	NA	NA	11165139	11330639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_10916.known	chr10	+	1633	5	FSM	ENSG00000134463.15	ENST00000379215.9	1633	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	29.8998327754521	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGTTTTATCTCCCC	11739514	True	NA	13	True	AATAAA	-18	NA	11742381	11764070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407_11755609_11763223
transcript_10917.nic	chr10	-	533	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115037	-95	0	5prime_fragment	FALSE	canonical	3	191	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	-12042642	False	NA	0	True	NA	NA	NA	12042904	12035058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12035442_12042754
transcript_10918.nic	chr10	-	435	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115135	-95	-98	5prime_fragment	FALSE	canonical	3	191	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGGAAGAAAAAAAGAA	-12042642	False	NA	16	True	AAAAAG	-42	NA	12042904	12035156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12035442_12042754
transcript_10919.nic	chr10	-	368	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115202	-95	-165	5prime_fragment	FALSE	canonical	3	191	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGACAAGGAACGCAAGA	-12042642	False	NA	14	True	NA	NA	NA	12042904	12035223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12035442_12042754
transcript_10920.known	chr10	-	5168	22	FSM	ENSG00000151461.20	ENST00000357604.10	5168	22	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_17	17.6272825028526	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCGTGGTGTTGTTT	-12038825	True	NA	-7	True	AATAAA	-14	NA	12042809	11920021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
transcript_10921.known	chr10	+	5173	17	FSM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_13	16.1535599791501	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACTCCTGGACTTCT	12063978	True	NA	8	True	AATAAA	-22	NA	12068953	12123221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_10927.nic	chr10	+	1468	7	ISM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	28920	0	0	5prime_fragment	FALSE	canonical	3	232	junction_2	8.76863095864394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAAAAATTAAAATTACT	12063978	True	NA	-25	True	TATAAA	-18	NA	12068953	12094301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072
transcript_10941.known	chr10	+	2495	12	FSM	ENSG00000065665.21	ENST00000298428.14	2495	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	12.4701295996235	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTAAGATCATTTGT	12128299	True	NA	13	True	AATAAA	-17	NA	12129676	12165407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_10951.known	chr10	-	917	11	FSM	ENSG00000165609.13	ENST00000378952.7	917	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	537.269811174981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGACCACCAGGCCTTCT	-12186793	True	NA	-99	True	NA	NA	NA	12195860	12167671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12180394_12180490_12184888_12184957_12186228_12186333_12195769
transcript_10959.known	chr10	-	1201	10	FSM	ENSG00000165609.13	ENST00000537776.5	1201	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	434.896780715313	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTGGTGGTATGGA	-12194320	True	NA	-4	True	AATAAA	-11	NA	12196144	12167576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_12167812_12170716_12170771_12170899_12170913_12172768_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_10961.known	chr10	-	1126	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	434.693250720807	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	-12186802	True	NA	3	True	NA	NA	NA	12195869	12169721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_10973.known	chr10	+	1321	13	FSM	ENSG00000151465.14	ENST00000281141.9	1321	13	0	0	0	0	multi-exon	FALSE	canonical	3	2482	junction_5	174.677381191727	3649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	12173604	True	NA	33	True	AATAAA	-18	NA	12196187	12250589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
transcript_10974.known	chr10	+	8088	11	FSM	ENSG00000183049.14	ENST00000619168.5	8088	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	7.21110255092798	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTCATTTCCTCTGTCA	12349482	True	NA	6	True	AATAAA	-19	NA	12349546	12835545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12349911_12553224_12553357_12666735_12666811_12760947_12761087_12769672_12769800_12791157_12791234_12814194_12814308_12816249_12816329_12824464_12824553_12825572_12825691_12828768
transcript_10976.known	chr10	+	3521	16	FSM	ENSG00000123240.17	ENST00000378748.7	3521	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	66.0815657603036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	13096209	True	NA	6	True	ATTAAA	-2	NA	13100172	13138291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109096_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10978.nic	chr10	+	2178	16	NIC	ENSG00000123240.17	novel	3521	16	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	65.8036135448165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCTTTTGTGTTATT	13096169	True	NA	9	True	NA	NA	NA	13100132	13136923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10979.known	chr10	+	3488	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	71.3700839910455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	13096209	True	NA	6	True	ATTAAA	-2	NA	13100172	13138291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10980.known	chr10	+	3479	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	55.6627967207498	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096199	True	NA	23	True	ATTAAA	-19	NA	13100162	13138308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10983.known	chr10	+	3321	14	FSM	ENSG00000123240.17	ENST00000378757.6	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	27.0968021432517	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096205	True	NA	23	True	ATTAAA	-19	NA	13100168	13138308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10985.nic	chr10	+	1960	14	NIC	ENSG00000123240.17	novel	3488	16	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_5	45.1227123696884	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCTTTTGTGTTATT	13096163	True	NA	9	True	NA	NA	NA	13100126	13136923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10986.nic	chr10	+	3345	14	NIC	ENSG00000123240.17	novel	3321	14	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	45.1227123696884	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096163	True	NA	23	True	ATTAAA	-19	NA	13100126	13138308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10993.known	chr10	+	3157	20	FSM	ENSG00000065328.17	ENST00000484800.6	3157	20	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_4	52.7726530372243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGTTTTCTCATCTG	13154117	True	NA	-98	True	NA	NA	NA	13161578	13209736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
transcript_10997.nic	chr10	+	1419	3	ISM	ENSG00000065328.17	ENST00000484800.6	3157	20	-25	37531	-4	-269	5prime_fragment	FALSE	canonical	3	199	junction_1	54	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCTCTTTGAAGTACCA	13154092	True	NA	NA	False	AATAAA	-17	NA	13161553	13172205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_13161607_13164127_13164210_13170921
transcript_10998.known	chr10	-	870	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.35410196624968	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	-13234214	True	NA	-4	True	AATAAA	-15	NA	13234374	13221765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
transcript_11.known	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00035_+_0_1100
transcript_110.known	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_4	964.45253252817	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
transcript_11001.known	chr10	-	1541	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	59.1164105811576	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-13295661	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_11007.nnic	chr10	-	1330	7	NIC	ENSG00000107537.14	novel	1541	9	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	168.457380036877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-13295714	True	NA	-7	True	AATAAA	-20	NA	13300117	13277798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_13278355_13280975_13281111_13283689_13283840_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_11016.known	chr10	-	3265	9	FSM	ENSG00000086475.15	ENST00000327347.10	3265	9	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_8	416.541245706833	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	-13348196	False	NA	-17	True	AATAAA	-29	NA	13348293	13317427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_11025.known	chr10	-	2988	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	1549.1114240369	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATAAACCTACTGTT	-13348201	False	NA	-28	True	AATAAA	-18	NA	13348298	13317438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
transcript_11026.known	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1538.69507395463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	-13348183	False	NA	-18	True	AATAAA	-17	NA	13348280	13318079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_11036.known	chr10	-	2731	3	FSM	ENSG00000151474.23	ENST00000492155.5	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13707757	13692168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13694040_13701339_13701479_13707036
transcript_11049.known	chr10	+	1670	10	FSM	ENSG00000165630.14	ENST00000378572.8	1670	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	14.0317101198995	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGTATAACTCAAATG	13583784	True	NA	3	True	AATAGA	-19	NA	13586964	13630859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_11055.nnic	chr10	+	1424	9	NIC	ENSG00000165630.14	novel	1670	10	NA	NA	-6	-137	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	36.4991438255749	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTTTTATGTAATA	13583752	True	NA	11	True	AGTAAA	-15	NA	13586932	13630722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13614014_13614087_13616397_13616554_13630259
transcript_11058.known	chr10	-	2633	4	FSM	ENSG00000065809.14	ENST00000468747.5	2633	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	13.2748718344933	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTTAAGAAAGCATTTC	-14601408	True	NA	NA	False	NA	NA	NA	14604389	14519158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14604239
transcript_11060.known	chr10	+	1762	14	FSM	ENSG00000187522.16	ENST00000378372.8	1762	14	0	0	0	0	multi-exon	TRUE	canonical	3	339	junction_3	61.935259193459	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAACCCTTTGTTTT	14831848	True	NA	18	True	ATTAAA	-18	NA	14838305	14871741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596_14870668_14871527
transcript_11066.known	chr10	+	578	6	FSM	ENSG00000187522.16	ENST00000441647.1	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	183.389639838242	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTCATTTTCTTCT	14838301	False	NA	8	True	AATAAA	-12	NA	14838436	14849668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849432
transcript_11068.known	chr10	+	4660	5	FSM	ENSG00000284024.4	ENST00000640019.3	4660	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	209.974998511728	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGGTCAGTCCACTAC	14831848	True	NA	13	True	AATAAA	-18	NA	14838305	14846999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14842133_14842847_14843370
transcript_11069.known	chr10	+	1689	4	FSM	ENSG00000284024.4	ENST00000645667.1	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	233.128004895737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTCATATTATTTG	14831844	True	NA	17	True	ATTAAA	-14	NA	14838301	14844737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14843370
transcript_1107.known	chr1	+	942	6	FSM	ENSG00000177674.16	ENST00000476512.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	415.30114374993	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGAGCCCCCATGGG	11726712	True	NA	NA	False	NA	NA	NA	11736116	11750326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11745987_11746224_11747439_11747546_11748414_11748611_11750076
transcript_11071.known	chr10	-	999	1	FSM	ENSG00000272853.1	ENST00000609399.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGCCGTCTTAAA	-14878566	True	NA	NA	False	ATTAAA	-33	NA	14878686	14877687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14877700_14878700
transcript_11073.known	chr10	-	2463	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	9.45558899621309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-14953699	True	NA	NA	False	NA	NA	NA	14954072	14908170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_11074.known	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	5.10829468181046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-14953723	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_11078.known	chr10	+	1292	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.0846085027484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872863	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_11079.known	chr10	+	3059	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	65.6676480468122	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	14872866	True	NA	NA	False	NA	NA	NA	14878865	14904315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_11083.nic	chr10	+	1873	6	NIC	ENSG00000152455.16	novel	1292	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	84.9635215842658	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872863	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_14878961_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_11085.nic	chr10	+	1209	5	NIC	ENSG00000152455.16	novel	1292	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	73.6592662195328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872800	True	NA	9	True	ATTAAA	-9	NA	14878799	14903085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_14878920_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_11087.known	chr10	+	2959	5	FSM	ENSG00000152455.16	ENST00000378331.5	2959	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	38.3210125127194	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	14872820	True	NA	NA	False	NA	NA	NA	14878819	14904315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878920_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_11093.nic	chr10	+	1724	5	NIC	ENSG00000152455.16	novel	3059	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	90.6128440123143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872866	True	NA	9	True	ATTAAA	-9	NA	14878865	14903085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_14878961_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_11099.known	chr10	+	682	3	FSM	ENSG00000197889.10	ENST00000407572.6	682	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCCATTTTATTT	14959366	True	NA	NA	False	ATTAAA	-22	NA	14959387	14972857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14959558_14966439_14966607_14972512
transcript_111.known	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_3	662.96511974613	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
transcript_1110.known	chr1	+	809	6	FSM	ENSG00000177674.16	ENST00000452018.6	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	412.853000473534	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTCCCAGGCTGGA	11726768	True	NA	NA	False	NA	NA	NA	11736172	11750409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748590_11750076
transcript_11102.nnic	chr10	-	1501	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.6731759484026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086441	True	NA	-3	True	ATTAAA	-21	NA	15088806	15075474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15075820_15077718_15078604_15078690_15078754_15078922_15079041_15088716
transcript_11103.nnic	chr10	-	1501	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.6731759484026	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086441	True	NA	-3	True	ATTAAA	-21	NA	15088806	15075474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15075900_15077798_15078604_15078690_15078754_15078922_15079041_15088716
transcript_11104.nnic	chr10	-	1066	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-30	-1030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.6731759484026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAAGTCTGTCCATAGC	-15086441	True	NA	NA	False	AAAACA	-29	NA	15088806	15076504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15076551_15077854_15078604_15078690_15078754_15078922_15079041_15088716
transcript_11107.known	chr10	-	3370	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	6.68331255192114	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086411	True	NA	-3	True	ATTAAA	-21	NA	15088776	15075474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
transcript_11109.known	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	23.3670886790232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	-15167316	True	NA	NA	False	NA	NA	NA	15168628	15108293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
transcript_1111.known	chr1	+	786	6	FSM	ENSG00000177674.16	ENST00000400895.6	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	392.812117939353	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACCAAGAGGCCAGGAG	11726719	True	NA	NA	False	NA	NA	NA	11736123	11750316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748611_11750076
transcript_11112.nic	chr10	-	1888	12	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	18.0810845867915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTAGGACTTTACTTCC	-15167386	True	NA	16	True	AGTAAA	-33	NA	15168698	15106372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_11113.known	chr10	-	5003	12	FSM	ENSG00000152465.18	ENST00000378165.9	5003	12	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	13.2284441843019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGTTTCTTGTAGATT	-15167381	True	NA	NA	False	ATTAAA	-45	NA	15168693	15105769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_11119.nnic	chr10	-	2046	11	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	-5	-267	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	22.5175487120601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACCAGGTCAGTGGAT	-15167386	True	NA	-7	True	AATAAA	-21	NA	15168698	15108560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_11120.known	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	15097132	False	NA	3	True	AATAAA	-15	NA	15097179	15104251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_15097410_15102217_15102337_15103304
transcript_11121.known	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	15096673	False	NA	7	True	AATAAA	-19	NA	15097330	15104255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_15097410_15103304
transcript_11122.known	chr10	+	863	2	FSM	ENSG00000152464.15	ENST00000441850.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTCATTGGCTTAAAAT	15095315	False	NA	NA	False	NA	NA	NA	15097419	15103820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_15097767_15103304
transcript_11124.known	chr10	-	2364	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	12.5063249304225	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	-15859820	True	NA	-5	True	AATAAA	-16	NA	15860507	15778173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_11126.known	chr10	-	2307	14	FSM	ENSG00000148481.14	ENST00000477891.1	2307	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	21.1500695929584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCATTTTTTACATT	-15859811	True	NA	-1	True	AATAAA	-20	NA	15860498	15778169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_11128.nnic	chr10	-	2329	14	NIC	ENSG00000148481.14	novel	2364	15	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	19.65260420583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	NA	False	NA	-5	True	AATAAA	-16	NA	15860553	15778173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_11133.known	chr10	+	3777	6	FSM	ENSG00000165983.15	ENST00000378000.5	3777	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7980768341691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATCTAAATGTATT	16436262	True	NA	2	True	AATAAA	-15	NA	16436983	16513737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_16437048_16437356_16437491_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_11142.known	chr10	+	3625	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.1346610995116	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	16436288	True	NA	10	True	AATAAA	-23	NA	16437009	16513745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_11145.known	chr10	+	3212	4	FSM	ENSG00000165983.15	ENST00000423462.6	3212	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.2138486760204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	16436221	True	NA	10	True	AATAAA	-23	NA	16436942	16513745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_16437048_16486351_16486618_16505019_16505161_16511045
transcript_11150.known	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_7	42.4645072383985	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-16807272	True	NA	0	True	ATTAAA	-24	NA	16817424	16590610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
transcript_11152.known	chr10	-	955	8	FSM	ENSG00000148484.18	ENST00000377911.1	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	210.230097458834	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGCTGCGTGTGAGGC	-16807311	True	NA	-26	True	AATAAA	-1	NA	16817463	16593312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
transcript_11159.known	chr10	-	12918	11	FSM	ENSG00000107614.22	ENST00000377799.8	12918	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	24.4501533737521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTCAAGGACTTCG	-17199757	True	NA	NA	False	AATAAA	-20	NA	17201672	17137335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_1116.known	chr1	+	1100	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	326.56727867317	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	11726742	True	NA	19	True	ATTAAA	-20	NA	11736146	11750771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
transcript_1117.known	chr1	+	1130	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	125.736579800788	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	11726731	True	NA	17	True	ATTAAA	-18	NA	11736135	11750769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
transcript_11174.known	chr10	-	711	3	FSM	ENSG00000107614.22	ENST00000479046.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	82.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATTTTTCTAGAATG	NA	False	NA	NA	False	AATAAA	-6	NA	17202054	17171907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17172025_17174550_17174661_17201570
transcript_11175.nnic	chr10	-	433	3	NNC	ENSG00000107614.22	novel	12918	11	NA	NA	0	-821	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	76	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCTTTTATATTTATC	-17199757	True	NA	NA	False	ATTAAA	-36	NA	17201672	17172728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_17172950_17174550_17174661_17201570
transcript_11176.nic	chr10	-	986	2	ISM	ENSG00000107614.22	ENST00000479046.1	711	3	382	1869	0	-1869	5prime_fragment	FALSE	canonical	3	169	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATTGTGTTGTTTC	-17199757	True	NA	NA	False	NA	NA	NA	17201672	17173776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_17174661_17201570
transcript_11177.known	chr10	+	1868	9	FSM	ENSG00000026025.16	ENST00000224237.9	1868	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	29.7108460835433	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	17223273	True	NA	16	True	AATAAA	-16	NA	17229277	17237593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_17229986_17230649_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_11178.nic	chr10	+	1445	8	ISM	ENSG00000026025.16	ENST00000224237.9	1868	9	1087	0	-244	0	3prime_fragment	FALSE	canonical	3	148	junction_1	24.6328136883321	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	17230346	False	NA	16	True	AATAAA	-16	NA	17230364	17237593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_11183.known	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_1	19.7033556081755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	-17614179	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_11186.known	chr10	-	717	5	FSM	ENSG00000165996.14	ENST00000466335.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	14.7711712467224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTGAGACAAATTGTG	-17617224	False	NA	-4	True	AATAAA	-15	NA	17617235	17599073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_11187.known	chr10	+	3856	14	FSM	ENSG00000136738.15	ENST00000377524.8	3856	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	15.9874210908481	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTGTTAGTTTAT	17641533	True	NA	NA	False	TATAAA	-26	NA	17644150	17716824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_11199.known	chr10	-	2166	11	FSM	ENSG00000241058.4	ENST00000377304.7	2166	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	10.6094297678999	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTATGAAAAGTTGTT	-18649507	True	NA	-10	True	AATAAA	-15	NA	18651587	18545560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
transcript_11203.known	chr10	+	12275	14	FSM	ENSG00000120594.17	ENST00000377252.5	12275	14	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_13	24.5687057407416	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTGTCTTTATG	19816205	True	NA	27	True	ATTAAA	-41	NA	19816431	20289856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702
transcript_1121.known	chr1	+	1067	4	FSM	ENSG00000177674.16	ENST00000376637.7	1067	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	454.489457156782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	11726679	True	NA	-42	True	NA	NA	NA	11736083	11750710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11747439_11747546_11748414_11748590_11750076
transcript_11216.known	chr10	+	1062	5	FSM	ENSG00000078403.17	ENST00000377091.7	1062	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.8629879327096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	21534267	False	NA	8	True	AATAAA	-20	NA	21534344	21557182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21551815_21551922_21556642
transcript_11217.nic	chr10	+	1927	5	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	-24	146981	-24	1067	5prime_fragment	FALSE	canonical	3	25	junction_1	25.9374246986859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	21534185	False	NA	NA	False	AGTAAA	-13	NA	21534207	21596649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_11219.nic	chr10	+	1888	5	ISM	ENSG00000078403.17	ENST00000650772.1	564	6	-219	15802	-11	1067	5prime_fragment	FALSE	canonical	3	15	junction_1	30.2324329156619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	21534198	False	NA	NA	False	AGTAAA	-13	NA	21534220	21596649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_11223.known	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.3629956194955	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	21533681	True	NA	8	True	AATAAA	-20	NA	21534231	21557182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
transcript_11224.known	chr10	+	785	4	FSM	ENSG00000078403.17	ENST00000652497.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.3292679903595	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTCACTTCTTCAAATG	21534262	False	NA	-6	True	AATAAA	-6	NA	21534475	21557168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_21534495_21534644_21534805_21538832_21538913_21556642
transcript_11226.known	chr10	-	6601	4	FSM	ENSG00000180592.17	ENST00000449193.7	6601	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCATACATTTCTAC	-21525635	False	NA	-5	True	ATTAAA	-18	NA	21525682	21513474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_21519659_21521388_21521481_21523682_21523872_21525546
transcript_11227.nic	chr10	-	353	2	ISM	ENSG00000180592.17	ENST00000449193.7	6601	4	57	10123	57	-4090	5prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGGTTCTGGATAT	-21525578	False	NA	NA	False	AATAAA	-22	NA	21525625	21523597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_21523872_21525546
transcript_11228.known	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	10.0165152878831	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-22002515	True	NA	-12	True	AATAAA	-15	NA	22003730	21756547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_1123.known	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_11	8.42958191369355	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-11805117	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
transcript_11230.nnic	chr10	-	1029	5	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	53513	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	58.0086200490927	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	NA	False	NA	-12	True	AATAAA	-15	NA	21807393	21756547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21807190
transcript_11231.known	chr10	+	926	8	FSM	ENSG00000148444.16	ENST00000376836.8	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	4.29997626951212	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	22316318	True	NA	7	True	AATAAA	-22	NA	22316387	22320306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318652_22318714_22318805_22318863_22318958_22319019_22319938
transcript_11232.known	chr10	+	892	2	FSM	ENSG00000224215.1	ENST00000443224.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTATTATTATTATTAT	NA	False	NA	NA	False	AATATA	-35	NA	23343956	23345181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_23344091_23344423
transcript_11233.known	chr10	-	1939	9	FSM	ENSG00000099256.19	ENST00000320152.11	1939	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	6.95409052285056	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTACTGTTTTTCT	-24951605	True	NA	-9	True	AATAAA	-26	NA	24952606	24848613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_24849892_24851387_24851465_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_11234.known	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.9131825880731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-24951591	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
transcript_11236.known	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	4	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	25015804	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25016693_25021741_25021909_25023175
transcript_11237.known	chr10	+	3788	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	30	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	25015850	True	NA	NA	False	ATTAAA	-16	NA	25016657	25026664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25016790_25021741_25021909_25023175
transcript_11238.known	chr10	+	2723	8	FSM	ENSG00000095777.17	ENST00000376302.5	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.29544701043734	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAGCTTTATCGCTAA	25933623	True	NA	NA	False	AATAAA	-15	NA	25934273	26023481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
transcript_11241.known	chr10	+	3376	27	FSM	ENSG00000095777.17	ENST00000642197.1	3376	27	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_25	7.47589815704025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTTACAATGTTTGAA	25933578	True	NA	NA	False	AATAAA	-29	NA	25934228	26166239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502_26021649_26024021_26024088_26026376_26026533_26066974_26067075_26068767_26068885_26070110_26070216_26070317_26070402_26088202_26088406_26096380_26096480_26096567_26096683_26120675_26120803_26125397_26125609_26128390_26128539_26143447_26143602_26145445_26145535_26147429_26147560_26153849_26153930_26154745_26154824_26157309_26157516_26166066
transcript_11242.known	chr10	-	3515	11	FSM	ENSG00000136754.18	ENST00000376140.4	3515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	116.042621480213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	-26857424	True	NA	-16	True	AATAAA	-22	NA	26860958	26746595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_11243.known	chr10	-	3515	10	FSM	ENSG00000136754.18	ENST00000376160.5	3515	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	73.0068489937759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857439	True	NA	-13	True	AATAAA	-25	NA	26860973	26746592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11244.known	chr10	-	3516	10	FSM	ENSG00000136754.18	ENST00000376139.6	3516	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	65.3425919365589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857437	True	NA	-13	True	AATAAA	-25	NA	26860971	26746592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11247.known	chr10	-	3467	10	FSM	ENSG00000136754.18	ENST00000376137.8	3467	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	136.926942762632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-16	True	AATAAA	-22	NA	26861087	26746595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_1125.known	chr1	+	814	6	FSM	ENSG00000011021.23	ENST00000376497.7	814	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	48.939145885477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACATCAATGGCTGGG	11804278	True	NA	NA	False	AAAACA	-7	NA	11806212	11820779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11820361
transcript_11251.known	chr10	-	3380	9	FSM	ENSG00000136754.18	ENST00000536334.5	3380	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.138821973818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-16	True	AATAAA	-22	NA	26861087	26746595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_11252.known	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	84.2576962360116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857452	True	NA	-13	True	AATAAA	-25	NA	26860986	26746592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11258.known	chr10	-	5564	34	FSM	ENSG00000107890.17	ENST00000436985.7	5564	34	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_28	8.48149284293819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAATTGATGGCTTATT	-27099140	True	NA	NA	False	TTTAAA	-37	NA	27100485	27005314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27005724_27006916_27006963_27012881_27013111_27014493_27014712_27017501_27017793_27022557_27022688_27024446_27024560_27028851_27028946_27029285_27029357_27033224_27033378_27034795_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046521_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_11259.known	chr10	-	2489	13	FSM	ENSG00000107890.17	ENST00000676299.1	2489	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	8.68067777691735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	-27099032	False	NA	NA	False	NA	NA	NA	27100377	27063035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27080648_27080772_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_11261.known	chr10	-	6775	34	FSM	ENSG00000107890.17	ENST00000376087.5	6775	34	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	8.98033766884434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGACACGATG	-27099149	True	NA	-74	True	AATATA	-34	NA	27100494	27004115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27005724_27006916_27006963_27012881_27013111_27014493_27014712_27017501_27017793_27022557_27022688_27024446_27024560_27028851_27028946_27029285_27029357_27033224_27033378_27034795_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046524_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_11262.nic	chr10	-	1683	11	ISM	ENSG00000107890.17	ENST00000676232.1	2599	24	-361	30563	0	0	5prime_fragment	FALSE	canonical	3	13	junction_5	6.57343137181792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGCTTAGAAGTCACA	-27099149	True	NA	NA	False	AAAAAG	-5	NA	27100494	27066240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_11273.known	chr10	-	4191	19	FSM	ENSG00000136758.20	ENST00000376016.8	4191	19	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_13	123.876344656404	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAAGATGTTGTGTG	-27142725	True	NA	49	True	GATAAA	-17	NA	27154384	27110110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27148905_27149041_27154177
transcript_11277.known	chr10	-	4127	18	FSM	ENSG00000136758.20	ENST00000613434.4	4127	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_15	248.894761045958	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAAAGATGTTGTGT	-27154406	False	NA	48	True	GATAAA	-16	NA	27154420	27110111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27145427_27145591_27148905_27149041_27154177
transcript_11286.known	chr10	-	3903	13	FSM	ENSG00000107897.20	ENST00000396271.8	3903	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	28.8631830076541	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	-27239973	True	NA	-1	True	AATAAA	-18	NA	27240797	27195213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_11287.known	chr10	-	1747	13	FSM	ENSG00000107897.20	ENST00000375888.5	1747	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	48.9937637754938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAGTTTGTGATGAT	-27240335	False	NA	NA	False	AATGAA	-23	NA	27240558	27197352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_11289.known	chr10	-	3848	13	FSM	ENSG00000107897.20	ENST00000375905.8	3848	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	41.5079476994734	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGCTTTTATTACTT	NA	False	NA	-4	True	AATAAA	-15	NA	27242130	27195216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_1129.nic	chr1	+	1176	6	ISM	ENSG00000011021.23	ENST00000376490.7	963	11	-35	4729	-3	2710	5prime_fragment	FALSE	canonical	3	90	junction_5	15.2525407719501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTGCAAGTCCT	11804293	True	NA	NA	False	NA	NA	NA	11806227	11823489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694
transcript_11290.known	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	39.0555865783015	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	27150239	True	NA	16	True	AATAAA	-18	NA	27155351	27187953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
transcript_11292.known	chr10	+	3623	12	FSM	ENSG00000120539.15	ENST00000375946.8	3623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	31.9242388287237	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGTAATTTACTTG	27154689	False	NA	12	True	AATAAA	-17	NA	27154823	27186919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27180952_27181067_27181479_27181582_27186378
transcript_11294.known	chr10	-	4173	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	12.9142115324216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTTTATTACTTGT	-27240656	False	NA	-2	True	AATAAA	-17	NA	27240879	27195214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_11296.known	chr10	-	3172	13	FSM	ENSG00000107897.20	ENST00000676997.1	3172	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	50.2714851801916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCTTTAAATAAATAAATA	-27240594	False	NA	NA	False	NA	NA	NA	27240817	27182837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27184316_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_1130.nnic	chr1	+	476	5	NNC	ENSG00000011021.23	novel	814	6	NA	NA	5	-2655	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	52.6212884676915	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTCAGGGTATTTATT	11804283	True	NA	NA	False	AATAAA	-18	NA	11806217	11818124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11817972
transcript_11302.known	chr10	+	2968	11	FSM	ENSG00000120539.15	ENST00000342386.10	2968	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	57.2464846082273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAATTTACTTGCATAT	27150257	True	NA	17	True	AATAAA	-22	NA	27155369	27186924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27181479_27181582_27186378
transcript_11305.known	chr10	-	3837	11	FSM	ENSG00000107897.20	ENST00000677960.1	3837	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	45.6058110332444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-27239938	True	NA	-17	True	AATAAA	-2	NA	27240762	27195229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_11310.nic	chr10	+	1358	7	ISM	ENSG00000120539.15	ENST00000342386.10	2968	11	-50	19383	-32	-19177	5prime_fragment	FALSE	canonical	3	173	junction_3	16.3137637867198	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGGACCTCACTTGT	27150207	True	NA	4	True	AATAAA	-18	NA	27155319	27167541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101
transcript_11313.known	chr10	-	3474	3	FSM	ENSG00000136758.20	ENST00000477432.1	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	487.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTTGTTCCAATTA	-27154900	True	NA	-5	True	AATAAA	-14	NA	27155266	27145418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27147669_27148905_27149041_27154177
transcript_11314.known	chr10	+	1090	8	FSM	ENSG00000099246.18	ENST00000683538.1	1090	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	283.769955694929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAGCAGTAAATATTTG	27500151	False	NA	NA	False	NA	NA	NA	27504382	27538163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27514054_27514421_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533999_27537875
transcript_11317.known	chr10	+	2622	8	FSM	ENSG00000099246.18	ENST00000621805.5	2622	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	247.12906650211	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTGTGTAGGAAGTA	27500002	True	NA	6	True	AATAAA	-20	NA	27504233	27539829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27531528_27531616_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_1132.nic	chr1	+	1913	5	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	28	-320	10	320	intron_retention	FALSE	canonical	3	122	junction_2	4.12310562561766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAATCAATAAATTT	11804306	True	NA	NA	False	AAAACA	-18	NA	11806240	11821099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487
transcript_11321.known	chr10	+	4875	7	FSM	ENSG00000099246.18	ENST00000356940.11	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_5	44.2169525056724	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGGATTTTCTTTT	27500072	True	NA	12	True	AATAAA	-22	NA	27504303	27542239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11325.known	chr10	+	582	7	FSM	ENSG00000099246.18	ENST00000683797.1	582	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	215.345974861126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTTGTTGAAAAGATC	27500054	True	NA	NA	False	NA	NA	NA	27504285	27537917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504449_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11327.known	chr10	+	835	6	FSM	ENSG00000099246.18	ENST00000683042.1	835	6	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_5	32.5785205311721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTTTAACTGCTAT	27500054	True	NA	NA	False	NA	NA	NA	27504285	27538107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533995_27537875
transcript_11328.known	chr10	+	4941	6	FSM	ENSG00000099246.18	ENST00000611151.5	4941	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	217.872806931017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGACTTGGATTTTCTT	27499942	True	NA	10	True	AATAAA	-20	NA	27504173	27542237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11329.known	chr10	+	1800	7	FSM	ENSG00000099246.18	ENST00000683755.1	1800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	220.331127069136	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGTAGATTTTTTT	27500080	True	NA	28	True	AATAAA	-39	NA	27504311	27539185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533940_27533995_27537875
transcript_11330.known	chr10	+	985	6	FSM	ENSG00000099246.18	ENST00000465772.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	239.087097100617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAAGAGCATGATTC	27500145	False	NA	-8	True	AATAGA	-34	NA	27504376	27538489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27537875
transcript_11333.known	chr10	-	3603	20	FSM	ENSG00000169126.16	ENST00000305242.10	3603	20	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	6.71130026496635	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCATAGTTGTT	-27998556	True	NA	-5	True	AATAAA	-20	NA	27999079	27812167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_11337.known	chr10	+	3513	14	FSM	ENSG00000095787.24	ENST00000628285.3	3513	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.130593738394	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	28532118	True	NA	53	True	AATAAA	-16	NA	28532770	28620986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583405_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_11340.known	chr10	-	563	6	FSM	ENSG00000197321.16	ENST00000674490.1	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	7.6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-29732855	True	NA	NA	False	AAGAAA	-20	NA	29735911	29555051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
transcript_11341.nic	chr10	-	2476	3	ISM	ENSG00000197321.16	ENST00000674490.1	563	6	-26	100823	-26	54	5prime_fragment	FALSE	canonical	3	53	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACACATACACACTCAAC	-29732881	True	NA	NA	False	AAGAAA	-20	NA	29735937	29655874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_29658069_29686552_29686652_29735754
transcript_11342.known	chr10	+	401	3	FSM	ENSG00000224597.11	ENST00000623175.4	2090	3	63	1626	-5	-2	multi-exon	FALSE	canonical	2	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATGAAGACATCAAGAAA	29409567	True	NA	NA	False	AATGAA	-42	NA	29409596	29420748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_29409684_29415356_29415413_29420490
transcript_11344.known	chr10	+	2025	3	FSM	ENSG00000224597.11	ENST00000427063.7	2043	3	18	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTGCTTTTGTTTCAA	29409542	True	NA	NA	False	AGTAAA	-20	NA	29409571	29422372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_29409659_29415356_29415413_29420490
transcript_11348.nic	chr10	-	2565	9	NIC	ENSG00000107951.15	novel	5560	9	NA	NA	-69	184	combination_of_known_junctions	FALSE	canonical	2	10	junction_8	246.969507227107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATATTCCCAGTATTCC	-30348728	False	NA	NA	False	AATAAA	-20	NA	30349046	30312825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30348856
transcript_11349.known	chr10	-	5560	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_5	76.2789903905394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	-30348960	True	NA	NA	False	AATAAA	-18	NA	30349278	30309800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
transcript_11352.known	chr10	-	695	3	FSM	ENSG00000107951.15	ENST00000421701.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_2	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTATTGATGACTGGC	-30348843	False	NA	NA	False	NA	NA	NA	30349161	30339971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_30340451_30341467_30341641_30349118
transcript_11353.known	chr10	+	932	3	FSM	ENSG00000107968.10	ENST00000375322.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGTAGTATTTCTACAA	30434060	False	NA	25	True	ATTAAA	-28	NA	30434243	30439481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_30434379_30437175_30437407_30438915
transcript_11354.known	chr10	-	585	2	FSM	ENSG00000237036.6	ENST00000441257.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAAGAAAGTCGTC	-31318593	True	NA	NA	False	NA	NA	NA	31319027	31318087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31318541_31318895
transcript_11356.known	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	-31318596	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31316500_31319000
transcript_11357.known	chr10	+	794	3	FSM	ENSG00000223834.5	ENST00000666021.1	794	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAAATTGAAAGTAAT	31602904	True	NA	NA	False	AATAAA	-20	NA	31602915	31606218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_31603320_31604630_31604728_31605925
transcript_11358.known	chr10	-	5060	20	FSM	ENSG00000165322.18	ENST00000344936.7	5060	20	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_16	32.1572486798743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTGCAGATTTAGAAAA	-31921017	True	NA	33	True	AAAAAG	-1	NA	31928831	31805397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_11359.known	chr10	-	4958	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	33.2636772203889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	-31921062	True	NA	27	True	NA	NA	NA	31928876	31805403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_1136.known	chr1	-	708	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAACTGATTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	11858945	11857463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11857672_11858213_11858470_11858701
transcript_11362.known	chr10	-	4914	18	FSM	ENSG00000165322.18	ENST00000375250.9	4914	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	40.5789418175381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	-31921000	True	NA	-6	True	AATAAA	-18	NA	31928814	31805436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_11368.known	chr10	-	5866	26	FSM	ENSG00000170759.11	ENST00000302418.5	5866	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	134.906403109712	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGACTTTCTTAAAAC	-32048886	True	NA	-15	True	AATAAA	-19	NA	32056425	32009014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32011517_32015508_32015660_32017142_32017360_32018051_32018157_32018315_32018388_32018501_32018563_32019857_32019960_32021021_32021132_32021225_32021288_32022139_32022258_32022847_32023037_32028427_32028572_32031072_32031280_32032705_32032775_32033844_32034039_32034689_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_1137.known	chr1	+	2976	19	FSM	ENSG00000083444.17	ENST00000196061.5	2976	19	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	18.8243997166273	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGGAAGATGCTCAGG	11929386	True	NA	26	True	ATTAAA	-15	NA	11934716	11975537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11934856_11947975_11948068_11949772_11949907_11950356_11950521_11952622_11952736_11954829_11954894_11956916_11957015_11957841_11957944_11958515_11958648_11960645_11960768_11963531_11963637_11964174_11964301_11964643_11964786_11965479_11965594_11966250_11966317_11966986_11967092_11970669_11970817_11972871_11972998_11974652
transcript_11371.nic	chr10	-	1062	5	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-401	10695	-2	-10695	5prime_fragment	FALSE	canonical	2	9	junction_3	2.54950975679639	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAAAGTAAAAGA	-32347206	False	NA	NA	False	GATAAA	-3	NA	32347220	32292553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_11372.known	chr10	-	3909	14	FSM	ENSG00000120616.16	ENST00000375110.6	3909	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	4.67651820109867	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-32378397	True	NA	-33	True	AATAAA	-29	NA	32378798	32267750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32378490
transcript_11373.known	chr10	-	907	2	FSM	ENSG00000120616.16	ENST00000480402.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-32347204	False	NA	-1	True	ATTAAA	-16	NA	32347218	32345111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32345563_32346762
transcript_11374.known	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-32344373	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32345624_32346762
transcript_11381.known	chr10	-	3955	17	FSM	ENSG00000150093.20	ENST00000676964.1	3955	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_14	618.876754693533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929337	True	NA	-16	True	ATTAAA	-3	NA	32958232	32900332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933350_32933584_32935491_32935559_32958144
transcript_11382.known	chr10	-	3839	17	FSM	ENSG00000150093.20	ENST00000679187.1	3839	17	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_14	618.716132280184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929352	True	NA	-16	True	ATTAAA	-3	NA	32958247	32900332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933481_32933584_32935491_32935559_32958144
transcript_11383.known	chr10	-	3982	17	FSM	ENSG00000150093.20	ENST00000417122.7	3982	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	636.710577401538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929380	True	NA	-16	True	ATTAAA	-3	NA	32958275	32900332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32953592_32953810_32958144
transcript_11384.known	chr10	-	3735	16	FSM	ENSG00000150093.20	ENST00000302278.8	3735	16	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_10	165.24481501363	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929335	True	NA	-1	True	ATTAAA	-18	NA	32958230	32900317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_11389.nic	chr10	-	369	4	ISM	ENSG00000150093.20	ENST00000484088.5	580	5	-29	3971	0	0	5prime_fragment	FALSE	canonical	3	1748	junction_1	34.6538437823121	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATAAAAATGTAA	-32929352	True	NA	NA	False	NA	NA	NA	32958247	32929931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_32930045_32932514_32932601_32935491_32935559_32958144
transcript_11390.known	chr10	-	3518	21	FSM	ENSG00000148498.16	ENST00000340077.9	3518	21	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_9	52.7907188812579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGGCTGTTGACGAAT	-34811844	True	NA	NA	False	AATAAA	-18	NA	34815325	34312259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
transcript_11391.known	chr10	-	2475	16	FSM	ENSG00000148498.16	ENST00000544292.5	2475	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	86.0679318264874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	34426731	34312263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337277_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34426684
transcript_11392.known	chr10	+	302	2	FSM	ENSG00000226386.1	ENST00000446211.1	302	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAAATGTCTGCAAAGA	34815756	False	NA	6	True	AATAAA	-23	NA	34815766	34816386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_34815802_34816119
transcript_11393.known	chr10	-	4312	22	FSM	ENSG00000108094.17	ENST00000374748.5	4312	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	115.900614238892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-35090296	False	NA	0	True	GATAAA	-16	NA	35090364	35008550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35089895_35090002_35090178
transcript_11394.known	chr10	-	4183	21	FSM	ENSG00000108094.17	ENST00000374749.8	4183	21	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_20	70.5864540829188	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-35090273	False	1968	0	True	GATAAA	-16	NA	35090341	35008550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090178
transcript_11395.known	chr10	-	4233	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_20	57.8943866018114	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	0	True	GATAAA	-16	NA	35090642	35008550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_11396.known	chr10	-	4115	20	FSM	ENSG00000108094.17	ENST00000626172.3	4116	20	-47	48	0	-1	multi-exon	FALSE	canonical	1	5	junction_1	103.343227715615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTTTTTTCTTAAATA	NA	False	NA	-1	True	GATAAA	-15	NA	35090642	35008551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_35010443_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_114.known	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	1416.5	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4003_4081_6057
transcript_11404.nic	chr10	+	1584	6	NIC	ENSG00000095794.20	novel	2020	8	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	37.8713612113428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATTTTAGGAAAGGAT	35125374	True	NA	2	True	AATAAA	-18	NA	35127000	35212122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211253
transcript_11405.nic	chr10	+	1897	6	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	-3	-56	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	37.8713612113428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTAGTGTTTGGTGCTC	35125318	True	NA	17	True	AATAGA	-16	NA	35126944	35212379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211253
transcript_1141.known	chr1	+	4407	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	44.934520261277	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	11970192	True	NA	10	True	AATAAA	-17	NA	11980443	12013508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_11422.known	chr10	+	563	4	FSM	ENSG00000095794.20	ENST00000496019.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	74.971105545181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAAAGTAAAAATTTTG	35125529	False	NA	NA	False	AAAAAG	-33	NA	35127155	35179462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35137781_35137880_35178888_35178987_35179133
transcript_11424.known	chr10	+	1207	4	FSM	ENSG00000095794.20	ENST00000374726.7	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	23.3285709425636	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	35126858	False	NA	8	True	AATAAA	-19	NA	35126922	35179847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133
transcript_11425.known	chr10	+	1074	4	FSM	ENSG00000095794.20	ENST00000490460.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	47.1616605117146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATGAACTGAAGGCAGC	35125332	True	NA	-58	True	AAAACA	-18	NA	35126958	35211811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35148367_35148492_35206894_35207052_35211253
transcript_11427.known	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	35125490	False	NA	-18	True	TTTAAA	-30	NA	35127116	35212435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35206894_35207052_35211253
transcript_11430.known	chr10	+	1030	3	FSM	ENSG00000095794.20	ENST00000474362.5	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGGAAAGGATGAT	NA	False	NA	5	True	AATAAA	-21	NA	35126790	35212125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35206894_35207052_35211655
transcript_11434.known	chr10	+	415	3	FSM	ENSG00000095794.20	ENST00000482633.5	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	52	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTAGCTTTAAGTCTTC	35125421	True	NA	NA	False	AATACA	-29	NA	35127047	35179304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35178888_35178987_35179133
transcript_11435.known	chr10	+	1895	3	FSM	ENSG00000095794.20	ENST00000356917.9	1895	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGGGAACAAGCCC	35195136	True	NA	-28	True	AATAAA	-1	NA	35195146	35212923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35195215_35206894_35207052_35211253
transcript_11436.known	chr10	+	1049	3	FSM	ENSG00000095794.20	ENST00000488328.5	1049	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGTGTTGGTTTAAT	35195122	True	NA	12	True	TATAAA	-14	NA	35195132	35212465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35195215_35206894_35207052_35211655
transcript_11441.nnic	chr10	+	781	6	NNC	ENSG00000189180.16	novel	6196	6	NA	NA	-31	83	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	69.5488317658895	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATGAATTTAATGCCT	38007560	True	NA	130	True	GATAAA	-16	NA	38010618	38054621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38034325_38034401_38054374
transcript_11442.known	chr10	+	539	5	FSM	ENSG00000189180.16	ENST00000478556.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.4430630746873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCAGTGTGATTCATG	38007640	True	NA	47	True	NA	NA	NA	38010698	38054538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38010784_38012297_38012351_38016874_38017016_38017290_38017387_38054374
transcript_11444.known	chr10	+	2854	4	FSM	ENSG00000189180.16	ENST00000628825.2	2854	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	64.8553947040816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGGGCACCTAACAAT	38007596	True	NA	27	True	AATAAA	-39	NA	38010654	38056861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38010784_38016870_38017016_38017290_38017387_38054377
transcript_11448.nnic	chr10	+	1435	9	NNC	ENSG00000099251.14	novel	1401	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	21.6531608547113	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTCCTTCCTTTTG	38356330	True	NA	NA	False	AATAAA	-14	NA	38356362	38378505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_38356490_38358311_38358516_38361279_38361323_38362239_38362339_38363521_38363611_38365433_38365630_38369952_38370010_38371074_38371174_38377984
transcript_11449.nic	chr10	-	2347	3	ISM	ENSG00000215146.5	ENST00000650175.1	4951	6	-52	17215	-49	1856	5prime_fragment	FALSE	canonical	1	5	junction_1	19	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGGTTTTCCATGTA	-42361197	True	NA	-2	True	AATAAA	-18	NA	42368023	42350943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_42352997_42360948_42361035_42367815
transcript_1145.known	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	84.4261676127596	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	12010930	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_11452.known	chr10	+	2254	5	FSM	ENSG00000185904.12	ENST00000429940.7	2254	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2.9474565306379	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	42475420	True	NA	NA	False	NA	NA	NA	42475542	42495337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_42475881_42477260_42477443_42486978_42487127_42492079_42492343_42494014
transcript_11465.nic	chr10	-	2025	6	NIC	ENSG00000196693.15	novel	1941	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	30.5587957877924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTCTACATGGTTT	-42636592	True	NA	-7	True	AATACA	-24	NA	42638569	42581593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42583124_42594594_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11467.nic	chr10	-	905	6	NIC	ENSG00000196693.15	novel	1941	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	30.5587957877924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTCTACATAATTTTAA	-42636569	True	NA	NA	False	NA	NA	NA	42638546	42582690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42583124_42594594_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11470.nic	chr10	-	2930	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	0	-3129	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	19.2499350648255	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTTTGATGCCAT	-42636593	True	NA	-7	True	AATAAA	-14	NA	42638570	42592237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11479.known	chr10	-	5982	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	26.0240273593462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGAACATCTTGTTT	-42636593	True	NA	-11	True	AATAAA	-20	NA	42638570	42589108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11484.known	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	78.1601978562338	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	42769728	True	NA	10	True	AATAAA	-22	NA	42782794	42834937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_11486.nic	chr10	+	2178	11	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-20	37414	-20	-37414	5prime_fragment	FALSE	canonical	3	437	junction_1	61.9034732466604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAATTCTGGTTCAGA	42769708	True	NA	NA	False	NA	NA	NA	42782774	42797523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421
transcript_11488.nic	chr10	+	2027	10	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-20	37755	-20	-37755	5prime_fragment	FALSE	canonical	3	437	junction_1	63.9722161914408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	42769708	True	NA	19	True	NA	NA	NA	42782774	42797182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_11492.nic	chr10	-	1645	12	NIC	ENSG00000198915.12	novel	4104	13	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	21.0108197235269	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	-43202879	True	NA	-14	True	NA	NA	NA	43203857	43196092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_11493.nnic	chr10	-	1567	12	NNC	ENSG00000198915.12	novel	4104	13	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	19.662440597442	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	-43202911	False	NA	-14	True	NA	NA	NA	43203889	43196092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_11495.known	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	946.893986791669	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43407800	False	17390	-1	True	TATAAA	-19	NA	43407819	43385616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
transcript_11497.known	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1049.60638124754	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43408863	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
transcript_11498.known	chr10	-	2186	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1017.09531947054	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	-43391776	True	NA	-32	True	AATAAA	-14	NA	43409166	43386021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
transcript_11499.known	chr10	-	2569	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	681.236294459484	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTCACGCTCCTG	-43391796	True	NA	-2	True	TATAAA	-18	NA	43409186	43385617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
transcript_115.known	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	2183	junction_1	515	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4568_4780_6057
transcript_11507.known	chr10	+	760	2	FSM	ENSG00000230555.2	ENST00000442526.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGGT	43420586	False	NA	NA	False	NA	NA	NA	43420737	43422100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43421067_43421669
transcript_11508.known	chr10	+	568	4	FSM	ENSG00000243660.12	ENST00000315429.11	568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTGTAATGTACGTG	NA	False	NA	NA	False	AATAGA	-21	NA	43436840	43481678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43436936_43475720_43475848_43476106_43476203_43481428
transcript_11509.known	chr10	+	583	2	FSM	ENSG00000243660.12	ENST00000490208.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTTGTTGAAAGAATA	43437033	True	NA	NA	False	NA	NA	NA	43437147	43454532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43437263_43454064
transcript_11510.known	chr10	+	2111	4	FSM	ENSG00000243660.12	ENST00000437590.4	2128	4	15	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTGATATTTCATTGA	43437011	True	NA	NA	False	AATAAA	-19	NA	43437125	43483179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43437263_43475720_43475848_43476106_43476203_43481428
transcript_11514.known	chr10	-	2069	4	FSM	ENSG00000196793.14	ENST00000374446.7	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	13.490737563232	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-43572566	True	NA	0	True	NA	NA	NA	43574616	43556343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43558172_43567898_43568022_43573636_43573678_43574539
transcript_11515.known	chr10	-	2027	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTGCCTTGTGTTT	-43572568	True	NA	-3	True	NA	NA	NA	43574618	43556346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43558172_43567898_43568022_43574539
transcript_11517.nnic	chr10	-	1955	2	NNC	ENSG00000196793.14	novel	701	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-43572547	True	NA	0	True	NA	NA	NA	43574597	43556343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_43558172_43574470
transcript_11518.known	chr10	-	701	2	FSM	ENSG00000196793.14	ENST00000491188.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATACTTAACACCA	-43572547	True	NA	NA	False	NA	NA	NA	43574597	43557528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43558172_43574539
transcript_11520.known	chr10	+	2024	5	FSM	ENSG00000198298.13	ENST00000361807.8	2024	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.8909587933665	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	43604724	True	NA	3	True	AATAAA	-18	NA	43606437	43617904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43606547_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_11523.known	chr10	+	2052	5	FSM	ENSG00000198298.13	ENST00000374435.3	2052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3289532714688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTATCTCTCTCTCTCTCT	43604712	True	NA	2	True	AATAAA	-17	NA	43606425	43617903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43606564_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_11524.nnic	chr10	+	1388	4	NIC	ENSG00000198298.13	novel	2024	5	NA	NA	-12	-539	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.4276973520408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGTGGCAAATTGTGC	43604693	True	NA	11	True	AATAAA	-20	NA	43606406	43617364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_43606547_43606996_43607075_43609254_43609351_43616290
transcript_11526.nnic	chr10	+	1928	4	NIC	ENSG00000198298.13	novel	2024	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.4276973520408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	43604693	True	NA	3	True	AATAAA	-18	NA	43606406	43617904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_43606547_43606996_43607075_43609254_43609351_43616290
transcript_11528.nnic	chr10	+	1292	3	NIC	ENSG00000198298.13	novel	2024	5	NA	NA	-12	-539	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGTGGCAAATTGTGC	43604693	True	NA	11	True	AATAAA	-20	NA	43606406	43617364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_43606547_43606996_43607075_43616290
transcript_1153.nic	chr1	+	2079	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	420	junction_2	87.8456565517044	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	12010869	True	NA	25	True	AATAAA	-16	NA	12019436	12032039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029895_12030027_12030125_12031265_12031404_12031721
transcript_11530.known	chr10	-	1201	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	53.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	-43646063	False	NA	-13	True	AATAAA	-23	NA	43648704	43643859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43644802_43646063_43646203_43648584
transcript_11532.known	chr10	-	1159	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	28.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-43646240	True	NA	-15	True	AATAAA	-21	NA	43648881	43643861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43644802_43646063_43646203_43648801
transcript_11534.nic	chr10	-	1268	3	NIC	ENSG00000169740.14	novel	1159	3	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	34	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATGTTTTATAA	-43646246	True	NA	-18	True	AATAAA	-18	NA	43648887	43643864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_43644802_43645957_43646203_43648801
transcript_11535.known	chr10	-	1089	2	FSM	ENSG00000229116.3	ENST00000452578.2	1089	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTATTGTGATAAA	NA	False	NA	-1	True	ATTAAA	-26	NA	44293709	44292083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_44292735_44293271
transcript_11536.known	chr10	+	3631	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.517587627015	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTATGGGAGAGTGTT	44958539	True	NA	NA	False	AATAAA	-22	NA	44959801	44995891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_11539.known	chr10	-	3078	2	FSM	ENSG00000165511.6	ENST00000625168.1	3078	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTGAACCGCTCTTG	-45000601	True	NA	0	True	AATAAA	-21	NA	45000888	44997697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_45000417_45000529
transcript_11542.known	chr10	+	2103	2	FSM	ENSG00000165512.5	ENST00000298299.4	2103	2	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_1	0	915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTCTGTTTATTTTTC	44992889	True	NA	20	True	AATAAA	-23	NA	45000922	45005326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_45000979_45003279
transcript_11548.known	chr10	-	920	4	FSM	ENSG00000172671.20	ENST00000497028.5	920	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	20.0055547841649	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGACCTCCTGC	-45671881	True	NA	NA	False	NA	NA	NA	45672762	45648474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_45648535_45651965_45652034_45663541_45663843_45672271
transcript_11555.known	chr10	+	1190	7	FSM	ENSG00000265354.4	ENST00000580018.4	1190	7	0	0	0	0	multi-exon	FALSE	canonical	3	1496	junction_5	155.644894979994	2031	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGTTGTCTCAATTT	45950040	True	NA	48	True	AATAAA	-41	NA	45972488	46003742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_45972731_45975453_45975513_45982522_45982617_45982845_45982931_45985382_45985442_45988736_45988848_46003202
transcript_11564.known	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_9	127.27378867603	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46014827	False	8628	0	True	ATTAAA	-16	NA	46023455	46005087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
transcript_11565.known	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_9	44.8778864404065	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46021995	True	NA	0	True	ATTAAA	-16	NA	46030623	46005087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_11566.nic	chr10	-	3290	9	NIC	ENSG00000266412.6	novel	3461	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	158.030406488751	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46021979	True	NA	0	True	ATTAAA	-16	NA	46030607	46005087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46030525
transcript_1157.nic	chr1	+	1393	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	171.668239272732	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	12010876	True	NA	25	True	AATAAA	-16	NA	12019443	12032039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_11571.nic	chr10	+	1233	4	ISM	ENSG00000204177.11	ENST00000690404.1	2391	6	0	5733	0	-5733	5prime_fragment	TRUE	canonical	0	0	junction_1	35.2230984819148	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGCCAGGCACA	46786260	True	NA	NA	False	NA	NA	NA	46786839	46791739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961
transcript_11572.nnic	chr10	+	1323	4	NNC	ENSG00000204177.11	novel	2391	6	NA	NA	4	-5733	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	33.6881119816604	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGCCAGGCACA	46786292	True	NA	NA	False	NA	NA	NA	46786871	46791739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_46787018_46788391_46788601_46789496_46789687_46790961
transcript_11575.known	chr10	+	1929	4	FSM	ENSG00000204179.11	ENST00000374342.6	1929	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.84754619472471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911230	True	NA	NA	False	AATAAA	-15	NA	46911395	47002322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_46911502_46946562_46946676_46999911_46999975_47000675
transcript_11576.known	chr10	+	2226	7	FSM	ENSG00000204179.11	ENST00000395725.7	2226	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.01386965216377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCCTGAAGTATTTTTA	46911272	True	NA	NA	False	AATAAA	-13	NA	46911437	47002320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_46911502_46943917_46944016_46946562_46946676_46964985_46965138_46967956_46968048_46999911_46999975_47000675
transcript_11577.nic	chr10	-	1348	4	ISM	ENSG00000254929.6	ENST00000605970.5	1594	12	-17	30792	14	-25250	5prime_fragment	FALSE	canonical	2	17	junction_3	44.9518260659861	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGCCAGACACAGT	-47551158	True	NA	NA	False	AAAAAG	-9	NA	47553500	47548607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553328
transcript_11578.nic	chr10	-	1248	4	ISM	ENSG00000254929.6	ENST00000431840.2	1241	9	-36	25250	-36	-25250	5prime_fragment	FALSE	canonical	3	69	junction_3	22.5141930543577	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGCCAGACACAGT	NA	False	NA	NA	False	AAAAAG	-9	NA	47553550	47548607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553478
transcript_11585.nnic	chr10	+	2243	8	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5635	782	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.56832224718437	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	47695108	True	NA	NA	False	AATAAA	-17	NA	47695341	47731218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47730236
transcript_11595.known	chr10	+	5844	12	FSM	ENSG00000107643.17	ENST00000395611.7	5844	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	22.5318874134686	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	48302208	True	NA	19	True	AATAAA	-28	NA	48306638	48439357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_11598.known	chr10	-	3495	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.40587727318528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-49538294	True	NA	NA	False	AATAAA	-19	NA	49539121	49515197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_11599.known	chr10	-	3795	5	FSM	ENSG00000225830.16	ENST00000680107.1	3795	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.77496438739212	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGAATTTGGTTTGT	-49538255	True	NA	NA	False	TTTAAA	-41	NA	49539082	49514113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49517122_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_116.known	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	6161	junction_2	18	973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_1168_1532_1765_1902
transcript_11600.known	chr10	-	3706	23	FSM	ENSG00000197444.10	ENST00000374103.9	3706	23	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_20	18.399436301103	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTTTCATTTCATG	-49760637	True	NA	0	True	AATAAA	-18	NA	49762323	49734640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762238
transcript_11603.known	chr10	-	4294	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	72.6856530014633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	-49936894	True	NA	-12	True	AATAAA	-21	NA	49942027	49818278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_11606.known	chr10	-	3473	17	FSM	ENSG00000227345.9	ENST00000614063.4	3473	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	88.1404241820971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGCAGCCCGCAGA	-49936853	True	NA	NA	False	NA	NA	NA	49941986	49818991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49941508
transcript_11616.known	chr10	+	2623	8	FSM	ENSG00000204152.14	ENST00000478381.5	2623	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	39.311420161348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938120	True	NA	NA	False	ATTAAA	-19	NA	49942048	49974850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_11617.known	chr10	+	2495	7	FSM	ENSG00000204152.14	ENST00000651259.3	2495	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	17.8831081066898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938124	True	NA	NA	False	ATTAAA	-19	NA	49942052	49974850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_11628.known	chr10	-	3717	11	FSM	ENSG00000198964.14	ENST00000361781.7	3717	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	14.2632394637403	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	-50621222	True	NA	NA	False	AATAAA	-20	NA	50623956	50305599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_11635.known	chr10	+	5145	6	FSM	ENSG00000204147.11	ENST00000647317.2	5145	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	43.9108187124768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTCGACTCCCAGTTT	50739226	True	NA	NA	False	AATAAA	-23	NA	50739935	50759255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50739984_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11639.known	chr10	+	5005	6	FSM	ENSG00000204147.11	ENST00000643851.1	5005	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	47.6336015854355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAATGTCCTTGAATGTA	50739226	True	NA	NA	False	CATAAA	-45	NA	50739935	50759189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50739984_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11642.known	chr10	+	3715	6	FSM	ENSG00000204147.11	ENST00000374007.5	3715	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	50.4238039025221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGTCTAATGAAAGGTA	NA	False	NA	NA	False	AATAAA	-22	NA	50739317	50757188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50740003_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11646.known	chr10	+	632	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	53.4280825034925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAGTGAACTACCA	50739238	True	NA	NA	False	AATGAA	-1	NA	50739947	50754809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11649.nic	chr10	+	2939	5	NIC	ENSG00000204147.11	novel	3715	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	56.817140899556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGTCTAATGAAAGGTA	50739218	True	NA	NA	False	AATAAA	-22	NA	50739927	50757188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_50739984_50742914_50743011_50749342_50749403_50752467_50752557_50754550
transcript_11651.known	chr10	-	1333	2	FSM	ENSG00000287221.1	ENST00000671395.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTATTACCCTATTTG	-50739401	False	NA	NA	False	AAAAAG	-19	NA	50739434	50736077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_50736763_50738786
transcript_11654.nnic	chr10	+	720	3	NNC	ENSG00000185532.20	novel	1549	6	NA	NA	-242163	45178	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTTTGTGTATATTA	NA	False	NA	NA	False	AATAAA	-22	NA	51804584	51956383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_51804691_51907506_51907571_51955833
transcript_11656.nnic	chr10	-	965	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6305	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	-51074735	True	NA	-1	True	AATAAA	-17	NA	51074858	51062578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_51062931_51068484_51068553_51074313
transcript_11657.known	chr10	-	4110	1	FSM	ENSG00000177613.9	ENST00000331173.6	4110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTATCTGATATGTTT	-51694190	True	NA	-4	True	AATAAA	-18	NA	51699595	51695485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_51695500_51699600
transcript_11661.known	chr10	-	807	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	241.670973381165	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACTCCTGAGTTCAG	-56347017	True	NA	-86	True	NA	NA	NA	56361266	56358142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11664.known	chr10	-	1857	9	FSM	ENSG00000122952.17	ENST00000373944.8	1857	9	0	0	0	0	multi-exon	TRUE	canonical	3	666	junction_3	104.519062256605	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-56347010	True	NA	15	True	AATAAA	-42	NA	56361259	56357226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11677.nnic	chr10	-	1645	9	NNC	ENSG00000122952.17	novel	1857	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	288.207363498922	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTCTTCTGACTTCCT	-56347053	True	NA	-13	True	AATAAA	-13	NA	56361302	56357444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_56358149_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11689.known	chr10	-	1851	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_2	111.725976735722	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56347024	True	NA	-6	True	AATAAA	-20	NA	56361273	56357437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11693.known	chr10	-	1621	8	FSM	ENSG00000122952.17	ENST00000489649.6	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	252.008503257897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTTCTCAAATA	-56347016	True	NA	-47	True	NA	NA	NA	56361265	56357478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360384_56361195
transcript_117.known	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_2	31.5	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_8967_9189_9325_9667
transcript_11719.known	chr10	-	1961	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	115.060370627288	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56347010	True	NA	-6	True	AATAAA	-20	NA	56361259	56357437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
transcript_11735.known	chr10	+	1068	2	FSM	ENSG00000287016.1	ENST00000655098.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGTTTCTCTGAAGT	56361239	True	NA	5	True	AATAAA	-16	NA	56361478	56364714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_56361857_56364024
transcript_11745.known	chr10	+	2375	3	FSM	ENSG00000122873.12	ENST00000333926.6	2375	3	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_2	21.5	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGTTAGGTTAAT	58261439	True	NA	NA	False	ATTAAA	-34	NA	58269161	58289586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58269305_58277116_58277323_58287560
transcript_11748.known	chr10	+	2623	7	FSM	ENSG00000072401.15	ENST00000373910.9	2623	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_5	25.6883025692413	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAACTTGTTTGCCTTTGC	58326390	True	NA	10	True	ATTAAA	-15	NA	58335005	58370748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58335226_58361337_58361402_58361494_58361527_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_11752.known	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_4	58.4534477644865	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	58372925	True	NA	21	True	AATAAA	-23	NA	58385409	58399220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_11756.known	chr10	+	973	6	FSM	ENSG00000108064.11	ENST00000373895.7	973	6	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_4	170.868370390778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGGATCAGAGTAATC	58372949	True	NA	NA	False	GATAAA	-34	NA	58385433	58395288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58394357_58394415_58394927
transcript_11759.known	chr10	+	1121	8	FSM	ENSG00000108064.11	ENST00000373899.3	1121	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	207.522705912842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTATCTTTTTATTC	NA	False	NA	NA	False	GATAAA	-17	NA	58385344	58395184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58385649_58386219_58386339_58386649_58386717_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_11761.nic	chr10	+	594	4	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-209	5720	-15	-5720	5prime_fragment	FALSE	canonical	3	419	junction_2	33.3099918276117	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATCATTGAAATACT	58372910	True	NA	37	True	AAAAAG	-23	NA	58385394	58388819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669
transcript_11763.known	chr10	-	3811	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	21.2800375939518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCACCCACAT	-60141005	False	NA	14	True	AAAAAG	-5	NA	60141016	60029689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
transcript_11767.known	chr10	-	493	3	FSM	ENSG00000151150.22	ENST00000486349.2	493	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	33	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTGTTTATTAAAGTT	-60140504	False	NA	NA	False	ATTAAA	-23	NA	60140515	60138516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_60138722_60138963_60139088_60140351
transcript_11778.known	chr10	+	1884	9	NNC	ENSG00000170312.17	novel	1889	8	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	657.148908163135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763060	True	NA	NA	False	ATTAAA	-7	NA	60778495	60794843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792122_60792130_60792132_60792290_60793876
transcript_1178.nnic	chr1	-	1432	7	NNC	ENSG00000162496.9	novel	2201	6	NA	NA	607	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	150.840331329375	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12617577	False	NA	-12	True	AATAAA	-19	NA	12617603	12567909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153_12617304_12617465
transcript_11790.known	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	479.76775844237	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	60763042	True	NA	NA	False	ATTAAA	-16	NA	60778477	60794852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
transcript_11796.known	chr10	+	1948	8	FSM	ENSG00000170312.17	ENST00000448257.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	428.650659342899	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTAAACTGTTTAACAA	60763057	True	NA	NA	False	AAAAAG	-37	NA	60778492	60794828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791893_60792054_60792147_60792290_60793876
transcript_118.known	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_2	30	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_8976_9189_9299_9434
transcript_1180.nic	chr1	-	1374	6	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	163.875562546708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12616763	False	129	-12	True	AATAAA	-19	NA	12616789	12567909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12616559
transcript_11803.known	chr10	+	1733	7	FSM	ENSG00000170312.17	ENST00000316629.8	1733	7	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_4	458.13498738545	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763018	True	NA	NA	False	ATTAAA	-7	NA	60778453	60794843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
transcript_1181.known	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	22.4321198284959	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12617224	True	NA	-12	True	AATAAA	-19	NA	12618210	12567909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
transcript_11813.nic	chr10	+	1750	9	ISM	ENSG00000150347.17	ENST00000279873.12	7492	10	-384	11087	-369	-7207	5prime_fragment	FALSE	canonical	0	0	junction_4	1.08972473588517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAAAATGCCC	NA	False	NA	NA	False	NA	NA	NA	61901314	62085857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_61901731_61902158_61902414_61940182_61940409_62000090_62000322_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701
transcript_11814.known	chr10	+	3141	7	FSM	ENSG00000150347.17	ENST00000309334.5	3141	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGAGCTTCACTCCTT	NA	False	NA	NA	False	NA	NA	NA	62049210	62093064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_62049484_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701_62085901_62090861
transcript_11817.known	chr10	-	6886	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	60.3908755627841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	-62268832	True	NA	2	True	AATAAA	-13	NA	62268844	62193085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_11819.known	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	32.4114177412837	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	-62264807	True	NA	NA	False	AATAAA	-12	NA	62268707	62238156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_11825.nnic	chr10	-	1471	4	NNC	ENSG00000182010.11	novel	6886	12	NA	NA	-68	-6481	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	102.492276131749	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATAGATCTTTGAGAT	-62268763	False	NA	NA	False	AATAAA	-16	NA	62268775	62244637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_62245628_62245998_62246058_62262624_62262822_62268550
transcript_11830.known	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	14.142135623731	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	63129961	True	NA	9	True	AATAAA	-15	NA	63133327	63155024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
transcript_11831.known	chr10	+	1816	3	FSM	ENSG00000148572.16	ENST00000435510.6	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	248.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACGTGGTTGATAGTT	63129880	True	NA	16	True	AATAAA	-22	NA	63133246	63155031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_63133501_63152149_63152191_63153510
transcript_11834.nnic	chr10	-	1985	3	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-34	-155308	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATTTTTATGTGTTGA	-63465279	True	NA	NA	False	NA	NA	NA	63466011	63375184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_63376488_63380317_63380483_63465494
transcript_11837.nnic	chr10	-	899	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-42	212884	-42	-160232	5prime_fragment	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCTGGATGTGGTGGC	-63465287	True	NA	NA	False	AAAAAG	-34	NA	63466019	63380108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_63380483_63465494
transcript_11839.known	chr10	+	5172	8	FSM	ENSG00000165476.14	ENST00000373758.5	5172	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	35.8466119994168	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAACGGCATTTTTTT	63518503	True	NA	NA	False	AATAAA	-18	NA	63521400	63625128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186_63610335_63619654_63619801_63620812
transcript_11842.known	chr10	+	1319	4	FSM	ENSG00000228065.12	ENST00000657227.2	1320	4	1	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATCCAAGTGGTGAAATC	65569679	True	NA	13	True	AATAAA	-26	NA	65570512	65586279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484
transcript_11845.known	chr10	+	1218	5	FSM	ENSG00000228065.12	ENST00000671392.1	1218	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.04285397107271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGAGGAGCACATTGAA	65569641	True	NA	NA	False	ATTAAA	-16	NA	65570474	65616187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_65570546_65571424_65571580_65572934_65573057_65585484_65585803_65615635
transcript_11847.known	chr10	-	1221	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.83242742918897	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAATTTATAATTCAA	-67837956	True	NA	-18	True	AATAAA	-19	NA	67838188	67796668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
transcript_11848.known	chr10	-	1064	3	FSM	ENSG00000108176.15	ENST00000339758.7	1064	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAGAAATTACCTCATA	-67837864	True	NA	NA	False	NA	NA	NA	67838096	67810841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67811664_67823313_67823393_67837933
transcript_11852.known	chr10	+	4107	9	FSM	ENSG00000096717.12	ENST00000212015.11	4107	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	30.7771729533432	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTTAAGGTATATAAT	67873227	True	NA	48	True	ATTAAA	-31	NA	67884655	67918390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_67885152_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_11859.known	chr10	-	4445	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	25.4704848795621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCAGTGGTTCTCAT	-68072393	True	NA	-8	True	AATAAA	-21	NA	68075283	67921907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_1186.known	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	168.31803230789	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578885	True	NA	15	True	AATAAA	-19	NA	13583761	13617957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
transcript_11861.known	chr10	-	4424	25	FSM	ENSG00000148634.16	ENST00000373700.9	4424	25	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	17.194152752866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGTGGTTCTCATATA	-68072393	True	NA	-5	True	AATAAA	-24	NA	68075283	67921904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_11866.nic	chr10	-	2300	16	ISM	ENSG00000148634.16	ENST00000412272.6	4211	24	-59	44708	-41	-1824	5prime_fragment	FALSE	canonical	3	68	junction_3	11.9925903049434	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGTTTTGAAATGAGAA	-68072452	True	NA	-18	True	AATAAA	-14	NA	68075342	67966615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_11867.known	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	43.058100283222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	-68072393	True	NA	-15	True	AATAAA	-18	NA	68075283	68067688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
transcript_11869.known	chr10	-	4269	18	FSM	ENSG00000204130.14	ENST00000602465.6	4269	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	5.37455236729432	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTGGTGTATGCCCTA	-68406574	True	NA	NA	False	AATAAA	-22	NA	68407277	68343407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68407185
transcript_11884.known	chr10	+	1332	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_4	394.725815137296	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	68304882	True	NA	29	True	AATAAA	-16	NA	68332121	68342272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11889.known	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_1	341.210083361636	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	68304824	True	NA	30	True	AATAAA	-21	NA	68332063	68343193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_1189.known	chr1	+	2737	6	FSM	ENSG00000162493.17	ENST00000621990.5	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	164.449870781342	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578955	True	NA	15	True	AATAAA	-19	NA	13583831	13617957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_11893.nic	chr10	+	1463	10	NIC	ENSG00000096746.18	novel	1332	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	580	junction_4	426.723809830836	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	68331975	True	NA	28	True	AATAAA	-15	NA	68332008	68342271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11894.nic	chr10	+	2385	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	580	junction_4	426.723809830836	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	68331975	True	NA	30	True	AATAAA	-21	NA	68332008	68343193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11898.nic	chr10	+	1508	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	586	junction_1	379.283762952629	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	68331975	True	NA	28	True	AATAAA	-15	NA	68332008	68342271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11899.nic	chr10	+	2430	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	586	junction_1	379.283762952629	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	68331975	True	NA	30	True	AATAAA	-21	NA	68332008	68343193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_119.known	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	0	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_6057
transcript_11909.known	chr10	-	2165	10	FSM	ENSG00000108187.16	ENST00000309049.8	2165	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.97212509593766	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAATGT	-68332811	True	NA	NA	False	NA	NA	NA	68332906	68283063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_1193.known	chr1	+	786	5	FSM	ENSG00000162493.17	ENST00000510906.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_4	47.3623004086584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCGTGCCTGTAGTCTC	13578956	True	NA	NA	False	AATAGA	-26	NA	13583832	13614514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299
transcript_1196.known	chr1	+	1843	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	15152496	True	NA	NA	False	NA	NA	NA	15152565	15220339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
transcript_11968.nic	chr10	-	4214	21	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-34	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	50.3521598345096	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-68467442	True	NA	-4	True	AATAAA	-18	NA	68471920	68414063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_11970.known	chr10	-	4267	21	FSM	ENSG00000138346.15	ENST00000358410.8	4267	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.3624696542946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-68467495	True	NA	-4	True	AATAAA	-18	NA	68471973	68414063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68415108_68416708_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_11973.nic	chr10	-	2194	10	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	138	21593	-10	272	internal_fragment	FALSE	canonical	3	173	junction_2	23.7008100085573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAACAAAATTGATCATTA	-68467505	True	NA	NA	False	AATAAA	-16	NA	68471983	68436581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_11975.known	chr10	-	3468	17	FSM	ENSG00000138346.15	ENST00000551118.6	3468	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.4582209668699	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-68467408	True	NA	-4	True	AATAAA	-18	NA	68471886	68414063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68415108_68416706_68416856_68419033_68419214_68419802_68419893_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_11977.nic	chr10	+	648	2	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-49	122078	-49	-122078	5prime_fragment	FALSE	canonical	3	80	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCAACTACGAAAGACAA	68551904	True	NA	NA	False	AAAAAG	-6	NA	68560287	68572409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68560743_68572216
transcript_11978.known	chr10	+	9612	12	FSM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	44.4918044268495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCATCTAACATTATTT	68551953	True	NA	12	True	AATAAA	-32	NA	68560336	68694487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
transcript_11979.known	chr10	+	4658	25	FSM	ENSG00000060339.14	ENST00000265872.11	4658	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	121.453344665989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	68713592	True	NA	19	True	ATTAAA	-19	NA	68721238	68792377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_11983.known	chr10	+	3415	24	FSM	ENSG00000060339.14	ENST00000540210.5	3415	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_13	133.126274322291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAGTAGTATAAATGTA	68713608	False	NA	-28	True	TATAAA	-40	NA	68721254	68791355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721289_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_11993.known	chr10	+	2432	17	FSM	ENSG00000060339.14	ENST00000541012.5	2432	17	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_13	92.7738345386241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATAACAACCTGC	68713580	True	NA	13	True	GATAAA	-30	NA	68721226	68771444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_12.known	ERCC-00039	+	724	1	FSM	ERCC-00039A	DQ883656	724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00039_+_0_700
transcript_120.known	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_4600_4800
transcript_12002.nic	chr10	+	871	3	ISM	ENSG00000060339.14	ENST00000543225.5	2407	16	-67	33786	31	605	5prime_fragment	FALSE	canonical	3	289	junction_1	87	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGTTGAATAGTCAAA	68721046	False	NA	NA	False	NA	NA	NA	68721174	68737515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68721283_68722454_68722578_68736875
transcript_12004.nic	chr10	+	2678	16	NIC	ENSG00000107625.14	novel	2501	15	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	103.207148761874	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	68896736	True	NA	24	True	AATAAA	-28	NA	68901249	68946847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68901472_68906225_68906338_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_12007.known	chr10	+	2501	15	FSM	ENSG00000107625.14	ENST00000373585.8	2501	15	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	31.1796146119053	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	68896801	True	NA	24	True	AATAAA	-28	NA	68901314	68946847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_12011.nnic	chr10	+	349	2	NNC	ENSG00000107625.14	novel	888	6	NA	NA	-4	-11021	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAGAAAAAACATCC	68896768	True	NA	NA	False	NA	NA	NA	68901281	68902209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_68901472_68902050
transcript_12012.known	chr10	+	4664	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_3	56.7997287288722	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGGCTTTTGTTTTC	68932654	True	NA	14	True	AATAAA	-16	NA	68956169	68985068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_12013.known	chr10	+	4829	15	FSM	ENSG00000165732.14	ENST00000620315.2	4776	15	29	-82	29	-1	multi-exon	FALSE	canonical	3	26	junction_1	189.216806864507	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	68956417	True	NA	13	True	AATAAA	-15	NA	68956439	68985067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68956749_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_1202.known	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	21.540659228538	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	-15521926	True	NA	-10	True	AATAAA	-14	NA	15524215	15491400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
transcript_12020.nic	chr10	+	342	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-18	19336	-15	-19336	5prime_fragment	FALSE	canonical	3	685	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGGAGCCATCTCAAA	68932604	True	NA	-16	True	AAAAAG	-9	NA	68956119	68959954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68956313_68959805
transcript_12021.nic	chr10	+	445	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-18	19233	-15	-19233	5prime_fragment	FALSE	canonical	3	685	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGACAAAAAATGAGGAGCC	68932604	True	NA	22	True	AAAAAG	-43	NA	68956119	68960057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68956313_68959805
transcript_12022.nic	chr10	+	507	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-18	19171	-15	-19171	5prime_fragment	FALSE	canonical	3	685	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAAATGAATG	68932604	True	NA	84	True	AATAGA	-25	NA	68956119	68960119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68956313_68959805
transcript_12023.known	chr10	+	2546	8	FSM	ENSG00000198954.9	ENST00000637738.2	2546	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	168.991486320997	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69006841_69006930_69008840_69008926_69010899_69011016_69015540
transcript_12024.known	chr10	+	2583	8	FSM	ENSG00000198954.9	ENST00000635779.2	2583	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	165.181903441296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69007626_69007752_69008840_69008926_69010899_69011016_69015540
transcript_12025.known	chr10	+	2462	7	FSM	ENSG00000198954.9	ENST00000361983.7	2462	7	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	23.2999761564017	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	68983412	True	NA	NA	False	AATAAA	-29	NA	68988802	69016982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_12027.known	chr10	+	2412	7	FSM	ENSG00000198954.9	ENST00000676080.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	140.377368388054	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989213_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_12028.known	chr10	+	2533	8	FSM	ENSG00000198954.9	ENST00000638119.2	2533	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	165.902479345733	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989259_68995203_68995279_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_1203.nnic	chr1	-	2044	8	NIC	ENSG00000132906.18	novel	2808	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	44.1966847034425	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	-15522066	True	NA	0	True	AATAAA	-23	NA	15524355	15492269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15518109_15518396_15524068
transcript_12031.known	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_8	60.8911682840788	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	69114356	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_12034.known	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	244.31704059793	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	69114330	True	NA	2	True	AATAAA	-12	NA	69124151	69172856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
transcript_12041.nic	chr10	+	2599	16	NIC	ENSG00000156502.14	novel	2477	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	94.4374219611414	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	69176865	True	NA	5	True	AATAAA	-14	NA	69180246	69209093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69180563_69182519_69182655_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_12042.known	chr10	+	2477	15	FSM	ENSG00000156502.14	ENST00000359655.9	2477	15	0	0	0	0	multi-exon	TRUE	canonical	2	150	junction_3	44.6778148845391	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	69176852	True	NA	5	True	AATAAA	-14	NA	69180233	69209093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_12053.nic	chr10	+	878	3	ISM	ENSG00000156502.14	ENST00000471069.5	2392	6	-26	6360	-10	-6360	5prime_fragment	FALSE	canonical	3	244	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAATATCATAGTTTC	69176842	True	NA	NA	False	TATAAA	-13	NA	69180223	69186903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_69180563_69185986_69186065_69186442
transcript_12054.known	chr10	+	3602	18	FSM	ENSG00000156515.24	ENST00000359426.7	3602	18	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_10	111.849441562552	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGAGTGATGCTTAATG	69309303	True	NA	29	True	AGTAAA	-18	NA	69318846	69401882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69319011_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_12056.known	chr10	+	1703	8	FSM	ENSG00000099282.10	ENST00000373290.7	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.53405521487387	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	69450649	True	NA	16	True	AATAAA	-22	NA	69451464	69507666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_12059.nnic	chr10	+	1409	6	NIC	ENSG00000099282.10	novel	1703	8	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	19.7686620690425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	69450682	True	NA	16	True	AATAAA	-22	NA	69451497	69507666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69451691_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_12060.known	chr10	-	1560	2	FSM	ENSG00000122859.5	ENST00000242462.5	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCATCTTTTTTTTTTAA	-69573217	True	NA	NA	False	NA	NA	NA	69573422	69571697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_69573045_69573209
transcript_12065.nnic	chr10	+	1167	5	NNC	ENSG00000171224.9	novel	1073	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	100.952959342458	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628099	True	NA	115	True	AATAAA	-17	NA	69630252	69633596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_69630314_69631175_69631276_69631479_69631548_69631708_69631840_69632789
transcript_12067.known	chr10	+	1073	4	FSM	ENSG00000171224.9	ENST00000373279.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	37.1573231902766	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628093	True	NA	115	True	AATAAA	-17	NA	69630246	69633596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789
transcript_12068.known	chr10	+	746	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	45.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGCAGGCATATTTG	69628097	True	NA	NA	False	NA	NA	NA	69630250	69633112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69630314_69631479_69631840_69632789
transcript_12069.nnic	chr10	+	1020	3	NIC	ENSG00000171224.9	novel	1073	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	106.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628078	True	NA	115	True	AATAAA	-17	NA	69630231	69633596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69630314_69631708_69631840_69632789
transcript_12073.known	chr10	+	1932	9	FSM	ENSG00000099284.15	ENST00000373255.9	1932	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	29.7436968112573	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTATTGCAACATT	70049154	True	NA	30	True	AATAAA	-25	NA	70052845	70112282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_12075.known	chr10	-	3134	9	FSM	ENSG00000042286.15	ENST00000307864.3	3134	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	9.06831709855803	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGGATCTTTTATTTT	-70132085	True	NA	NA	False	AATAAA	-19	NA	70132825	70112270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70132733
transcript_12078.known	chr10	-	2620	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	53.597263611743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGTGTCTCTGAGC	-70144415	True	NA	-6	True	AATAAA	-12	NA	70146676	70137982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
transcript_1208.known	chr1	-	1621	5	FSM	ENSG00000132906.18	ENST00000348549.9	1621	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	50.4058528347651	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	-15522058	True	NA	0	True	AATAAA	-23	NA	15524347	15492269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15518109_15518396_15524068
transcript_12083.nnic	chr10	-	1323	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-24	-1225	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	70.4320003028926	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70146711	False	NA	-18	True	AATAAA	-18	NA	70146724	70139207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_70140142_70142667_70142854_70143841_70143973_70146652
transcript_12084.nnic	chr10	-	1111	2	NIC	ENSG00000156521.14	novel	2620	4	NA	NA	-9	-1225	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70144448	True	NA	-18	True	AATAAA	-18	NA	70146709	70139207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_70140142_70146532
transcript_12085.known	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	183.89815282445	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154894	True	NA	-17	True	ATTAAA	-14	NA	70170523	70147288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
transcript_1209.known	chr1	-	3095	7	FSM	ENSG00000116771.6	ENST00000375826.4	3095	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	4.81894409826699	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTAATCTTAAAATAAC	-15584210	True	NA	-33	True	ATTAAA	-21	NA	15585051	15571698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15573725_15574756_15574842_15577684_15577865_15578858_15579055_15580093_15580143_15583192_15583396_15584695
transcript_12090.known	chr10	-	5902	7	FSM	ENSG00000079332.15	ENST00000373241.9	5902	7	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_6	54.8171201967658	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154885	True	NA	-17	True	ATTAAA	-14	NA	70170514	70147288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170412
transcript_12091.nnic	chr10	-	716	7	NNC	ENSG00000079332.15	novel	3227	7	NA	NA	-6	-277	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	159.282505839991	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGCTTCCTCATGAAC	-70154900	True	NA	-5	True	AATAAA	-29	NA	70170529	70152426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170475
transcript_12094.known	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_8	85.3789201149792	2070	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-70216474	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
transcript_121.known	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1806	junction_2	921.5	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_4081_4568_4780_6570
transcript_12109.known	chr10	-	3074	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	12.5299640861417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-70379242	True	NA	-8	True	AATAAA	-17	NA	70382625	70298974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
transcript_12110.known	chr10	-	2924	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.451579494951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379243	True	NA	-9	True	AATAAA	-16	NA	70382626	70298975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
transcript_12111.known	chr10	-	2906	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	34.2928563989645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379243	True	NA	-9	True	AATAAA	-16	NA	70382626	70298975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
transcript_12119.nnic	chr10	-	2002	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-879	-379	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_2	212.5	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCCAGCTGGTGCC	-70442258	True	NA	-9	True	AATAAA	-15	NA	70442560	70432314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_1212.known	chr1	+	1443	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0.748331477354788	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	15742435	True	NA	5	True	AATAAA	-18	NA	15742498	15747982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
transcript_12125.nnic	chr10	-	1865	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-879	297	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_2	212.5	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGCCTCAGGCTGGG	-70442258	True	NA	-6	True	ATTAAA	-14	NA	70442560	70432451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_12128.known	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	106.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-70436508	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70433089_70435285_70435984_70441474
transcript_12129.known	chr10	+	5778	15	FSM	ENSG00000166224.17	ENST00000373202.8	5778	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	12.2865448224254	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	70809427	True	NA	135	True	AATAAA	-25	NA	70815947	70881184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_70816127_70816810_70816881_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
transcript_1213.known	chr1	+	3314	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_4	48.7568905386716	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753833	True	NA	20	True	AATAAA	-21	NA	15758794	15786589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_12134.nic	chr10	-	492	4	NIC	ENSG00000166228.9	novel	389	3	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	134.92055275441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	-70884652	True	NA	NA	False	AATACA	-35	NA	70888603	70882279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_70882486_70885151_70885233_70885797_70885930_70888530
transcript_12136.known	chr10	-	732	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.984604373083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCCGGGGGAAGGG	-70888232	False	3951	NA	False	NA	NA	NA	70888254	70883931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
transcript_12138.known	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	57.1858568373529	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	-70884614	True	NA	-13	True	AATAAA	-18	NA	70888565	70883509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
transcript_12139.known	chr10	-	389	3	FSM	ENSG00000166228.9	ENST00000493961.5	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	-70885877	False	90	NA	False	AATACA	-35	NA	70885899	70882279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70882486_70885151_70885233_70885797
transcript_12141.known	chr10	-	472	2	FSM	ENSG00000237512.7	ENST00000449737.5	472	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	-71217253	False	NA	-3	True	AAGAAA	-16	NA	71217825	71217223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_71217636_71217765
transcript_12142.known	chr10	-	647	2	FSM	ENSG00000237512.7	ENST00000447119.3	717	2	66	4	66	0	multi-exon	FALSE	canonical	3	34	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	NA	False	NA	-3	True	AAGAAA	-16	NA	71218228	71217223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_71217636_71217993
transcript_12143.known	chr10	+	2256	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	23.9382539045771	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTCATTGATGTCT	71318302	True	NA	14	True	AATAAA	-16	NA	71319258	71363385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_12144.known	chr10	+	2136	5	FSM	ENSG00000198246.9	ENST00000644591.1	2136	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	54.9499772520426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	71318305	True	NA	-20	True	NA	NA	NA	71319261	71363351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_71319311_71322755_71323055_71351561_71351789_71356080_71356244_71361953
transcript_12145.known	chr10	+	1927	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	53.9032054293208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	71318326	True	NA	19	True	AATAAA	-21	NA	71319282	71363390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
transcript_12146.known	chr10	-	4714	7	FSM	ENSG00000107738.20	ENST00000394957.8	4714	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.67497927018681	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGTCTCCTGCTTCCT	-71773490	True	NA	NA	False	AGTAAA	-20	NA	71773520	71747555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_71751291_71751667_71751862_71752974_71753003_71755358_71755467_71760867_71760925_71761597_71762027_71773357
transcript_12151.known	chr10	-	2748	14	FSM	ENSG00000197746.15	ENST00000394936.8	2748	14	0	0	0	0	multi-exon	FALSE	canonical	3	4354	junction_3	417.389945810755	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTAATGTTTCTGT	-71828404	True	NA	-21	True	AATAAA	-16	NA	71851251	71816297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822008_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_12157.known	chr10	-	2830	14	NNC	ENSG00000197746.15	novel	2748	14	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1393.18805146526	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCTAATGTTTCTG	-71828478	True	NA	-22	True	AATAAA	-15	NA	71851325	71816298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822017_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_1216.known	chr1	-	2720	16	FSM	ENSG00000116809.12	ENST00000375743.9	2720	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	12.9690229221617	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-15974740	True	NA	0	True	AATAAA	-17	NA	15976101	15941868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_12163.nic	chr10	-	1630	11	NIC	ENSG00000138303.18	novel	2270	13	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	57.2940660103645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGCACAGTTCAG	NA	False	NA	-3	True	CATAAA	-18	NA	72216321	72097043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_12164.nic	chr10	-	2125	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.0808769376539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	-72214080	False	NA	-13	True	ATTAAA	-15	NA	72215987	72096521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_12165.known	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.9022918817731	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	-72214369	True	NA	-15	True	AATAAA	-14	NA	72216276	72096031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_12168.nic	chr10	-	1604	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.0808769376539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	-72214080	False	NA	-2	True	CATAAA	-19	NA	72215987	72097042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_12170.nic	chr10	-	1950	9	NIC	ENSG00000138303.18	novel	2479	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	46.3220722226457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	72216321	72096519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_12172.known	chr10	-	1349	9	FSM	ENSG00000138303.18	ENST00000672940.1	1349	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	43.876068363061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	-72214370	True	NA	-2	True	CATAAA	-19	NA	72216277	72097042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_12184.known	chr10	+	3567	5	FSM	ENSG00000166295.9	ENST00000621663.4	3567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	371.520776673391	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	72208250	True	NA	4	True	ATTAAA	-16	NA	72215999	72235858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216139_72220053_72220380_72223887_72224057_72230365_72230441_72233000
transcript_12187.known	chr10	+	3231	4	FSM	ENSG00000166295.9	ENST00000299381.5	3231	4	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	226.582337254155	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTCTCATTGATCAC	72208262	True	NA	6	True	ATTAAA	-18	NA	72216011	72235860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216139_72223887_72224057_72230365_72230441_72233000
transcript_12193.nic	chr10	+	624	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-12	-320	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	72208238	True	NA	29	True	NA	NA	NA	72215987	72233295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_12194.nic	chr10	+	1085	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-12	-73	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCTGAGTTCTTCTCA	72208238	True	NA	19	True	AATAAA	-28	NA	72215987	72233756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_12195.nic	chr10	+	1158	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72208238	True	NA	20	True	AATAAA	-21	NA	72215987	72233829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_122.known	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	44.5	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_+_1347_1678_1886_2389
transcript_12204.nnic	chr10	+	524	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-15	-320	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	72208235	True	NA	29	True	NA	NA	NA	72215984	72233295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_12205.nnic	chr10	+	985	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-15	-73	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCTGAGTTCTTCTCA	72208235	True	NA	19	True	AATAAA	-28	NA	72215984	72233756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_12206.nnic	chr10	+	1058	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72208235	True	NA	20	True	AATAAA	-21	NA	72215984	72233829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_12209.known	chr10	+	3100	3	FSM	ENSG00000166295.9	ENST00000615507.4	3100	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	85.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	72208250	True	NA	4	True	ATTAAA	-16	NA	72215999	72235858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216073_72223887_72224057_72233000
transcript_1221.known	chr1	+	1777	14	FSM	ENSG00000184908.20	ENST00000684624.1	1777	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.28254914258135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGTCTGGTTCCCAGT	16048913	False	NA	-42	True	NA	NA	NA	16048999	16057252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16049032_16049119_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055674_16055759_16056421_16056509_16056868
transcript_12210.known	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	515	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	72208279	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216073_72230365_72230441_72233000
transcript_12214.nic	chr10	+	735	3	ISM	ENSG00000166295.9	ENST00000621663.4	3567	5	-3	11704	-3	-9461	5prime_fragment	FALSE	canonical	3	227	junction_2	39.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTCCACATTTCATT	72208247	True	NA	16	True	ATTAAA	-17	NA	72215996	72224154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_72216139_72220053_72220380_72223887
transcript_12215.nic	chr10	+	427	2	ISM	ENSG00000166295.9	ENST00000299381.5	3231	4	-33	11706	-21	-9461	5prime_fragment	FALSE	canonical	3	551	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTCCACATTTCATT	72208229	True	NA	16	True	ATTAAA	-17	NA	72215978	72224154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_72216139_72223887
transcript_12216.nnic	chr10	+	375	2	NIC	ENSG00000166295.9	novel	734	3	NA	NA	-14	-13274	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAGAAAAGAAAACAT	72208236	True	NA	NA	False	NA	NA	NA	72215985	72220341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72220053
transcript_12219.known	chr10	+	1744	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_1	5	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	72269623	True	NA	8	True	AATAAA	-17	NA	72273923	72276036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72274061_72274156_72274422_72274694
transcript_1222.known	chr1	+	2129	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	3.8613109460677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	16048702	True	NA	14	True	AATAAA	-14	NA	16048788	16057308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_12220.known	chr10	+	1830	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAACAGTTGGTTGAG	72269623	True	NA	-2	True	AATAAA	-7	NA	72273923	72276026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72274422_72274694
transcript_12221.known	chr10	+	1371	4	FSM	ENSG00000168209.6	ENST00000491934.3	1371	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	509.133250403729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTTTTCTAATA	72269618	True	NA	18	True	AATACA	-31	NA	72273918	72275998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72274061_72274156_72274422_72274694_72275560_72275899
transcript_12222.known	chr10	-	2935	9	FSM	ENSG00000148719.16	ENST00000444643.8	2935	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	40.3322141718007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	-72352243	True	NA	32	True	NA	NA	NA	72354919	72332862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12224.nic	chr10	-	1721	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.4278273748591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGAGCTGATTTCTTC	-72352301	True	NA	NA	False	TTTAAA	-21	NA	72354977	72334080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12226.nic	chr10	-	1297	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-58	18	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.4278273748591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCACAGCTGCCCTCTC	-72352301	True	NA	-8	True	ATTAAA	-19	NA	72354977	72334504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12227.known	chr10	-	4360	8	FSM	ENSG00000148719.16	ENST00000338820.7	4360	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	12.3337929680854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGGTCTGCATTGAG	-72355135	True	NA	0	True	AATATA	-20	NA	72355149	72332829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12228.known	chr10	-	2357	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_9	26.0609584190415	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTCCTTTATTTTAG	-72619676	True	NA	-14	True	AATAAA	-14	NA	72626079	72367339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_12234.known	chr10	-	580	3	FSM	ENSG00000107745.20	ENST00000604025.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	18	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCTAGGACCAATAA	-72619671	True	NA	NA	False	NA	NA	NA	72626074	72562710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72563064_72566632_72566795_72626009
transcript_12235.nnic	chr10	-	2836	16	NNC	ENSG00000122884.13	novel	2727	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	119.782840544416	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092893	True	NA	-13	True	TTTAAA	-5	NA	73096866	73007216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73077720_73077814_73096765
transcript_12237.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000373008.6	2727	15	0	0	0	0	multi-exon	TRUE	canonical	3	314	junction_7	30.5651695862584	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092877	True	NA	-13	True	TTTAAA	-5	NA	73096850	73007216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12239.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000307116.6	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	104.958227842493	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092877	True	NA	-13	True	TTTAAA	-5	NA	73096850	73007216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12244.known	chr10	-	2790	14	FSM	ENSG00000122884.13	ENST00000440381.5	2790	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	101.796525207783	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	-73096864	False	NA	-20	True	NA	NA	NA	73096974	73007223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12249.nic	chr10	-	1032	7	ISM	ENSG00000122884.13	ENST00000440381.5	2790	14	37	43901	37	-41485	5prime_fragment	FALSE	canonical	3	353	junction_4	18.9032625050104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGCTGTGGATTACCT	-73096827	False	NA	NA	False	AAGAAA	-4	NA	73096937	73051124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12251.known	chr10	-	2844	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	99.9639986215445	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	-73096864	False	NA	-20	True	NA	NA	NA	73096974	73007223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12252.known	chr10	-	2743	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	135.323139339938	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092893	True	NA	-13	True	TTTAAA	-5	NA	73096866	73007216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12256.known	chr10	-	3006	14	FSM	ENSG00000122882.11	ENST00000372979.9	3006	14	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_11	39.8272898619964	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTACAGACAGCTC	-73163110	True	NA	-41	True	ATTAAA	-13	NA	73168008	73133667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_12274.known	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	17.8115131305569	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	-73224979	False	22276	-3	True	AATAAA	-19	NA	73247255	73241953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
transcript_1228.nic	chr1	-	1966	10	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	6101	250	-8	-250	3prime_fragment	FALSE	canonical	3	180	junction_3	21.8428732338745	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16206535	False	199	-7	True	AATAAA	-17	NA	16206551	16198103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179
transcript_12282.known	chr10	+	834	1	FSM	ENSG00000138286.15	ENST00000607940.1	834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGGTTTTACGGTC	NA	False	NA	20	True	AATAAA	-28	NA	73230472	73231306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73230500_73231300
transcript_12283.known	chr10	+	1919	8	FSM	ENSG00000166321.14	ENST00000372997.3	1919	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.80645824036021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	73110248	True	NA	NA	False	AATAAA	-19	NA	73110529	73131828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73126672_73126828_73130702
transcript_12284.known	chr10	+	2101	9	FSM	ENSG00000166321.14	ENST00000357321.9	2101	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.48434777866302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTCTGATGTCTTTT	73110173	True	NA	NA	False	AATAAA	-14	NA	73110454	73131823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73125397_73125510_73126672_73126828_73130702
transcript_12285.known	chr10	+	365	3	FSM	ENSG00000166321.14	ENST00000469925.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATATTTTTACT	73110238	True	NA	NA	False	AATAAA	-13	NA	73110519	73115168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73114943
transcript_12292.known	chr10	+	548	3	FSM	ENSG00000227540.1	ENST00000457758.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTTCACATTATTA	73252252	False	NA	2	True	ATTAAA	-20	NA	73253031	73254344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73253064_73253190_73253255_73253892
transcript_12293.known	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	688	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	-73230417	True	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73249319_73251762_73252024_73252469
transcript_12295.known	chr10	-	2579	3	FSM	ENSG00000182180.14	ENST00000372945.8	2579	3	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_1	109.5	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATTTTCCGTAGCAAA	-73230368	True	NA	-31	True	AATAAA	-20	NA	73252644	73248848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73250992_73251762_73252024_73252469
transcript_12296.known	chr10	-	2580	3	FSM	ENSG00000182180.14	ENST00000479005.1	2580	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	629	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCGTAGCAAATGTATA	-73230349	True	NA	-25	True	AATAAA	-26	NA	73252625	73248842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73250992_73251762_73252038_73252469
transcript_12297.known	chr10	+	762	2	FSM	ENSG00000227540.1	ENST00000457147.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	73252011	True	NA	7	True	ATTAAA	-25	NA	73252790	73254349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73253096_73253892
transcript_12299.known	chr10	-	612	3	FSM	ENSG00000182180.14	ENST00000473427.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCCTTGCTCTTCT	-73230358	True	NA	31	True	AATAAA	-11	NA	73252634	73250743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73250992_73251762_73252024_73252531
transcript_123.known	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1905	junction_1	0	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_+_1886_2251
transcript_12303.known	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_12	126.357957142925	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-73405624	True	NA	-5	True	TATAAA	-13	NA	73414058	73375100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_12305.nic	chr10	-	2067	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	260.900981818869	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-73405647	True	NA	-26	True	AATAAA	-13	NA	73414081	73375444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_12308.nic	chr10	-	1731	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-5	-132	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	260.900981818869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTGTAATAATATTGAA	-73405647	True	NA	0	True	AATAAA	-19	NA	73414081	73375780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_12313.nnic	chr10	-	1492	7	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3536	0	multi-exon	FALSE	canonical	3	21	junction_6	6.3355259362494	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73647181	True	NA	NA	False	AATGAA	-43	NA	73647493	73631611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_12314.nnic	chr10	-	1389	6	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3537	0	multi-exon	FALSE	canonical	2	4	junction_5	11.6516093309036	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73647180	True	NA	NA	False	AATGAA	-43	NA	73647492	73631611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73647339
transcript_1232.known	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-16236933	True	NA	NA	False	GATAAA	-22	NA	16237183	16231691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
transcript_12320.nic	chr10	-	1607	4	ISM	ENSG00000242288.9	ENST00000399449.3	3810	19	-53	50619	-53	-50619	5prime_fragment	FALSE	canonical	3	21	junction_3	22.1259023670348	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAAAATAAGCCA	-73729383	True	NA	NA	False	NA	NA	NA	73730519	73724913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730438
transcript_12321.nic	chr10	-	1414	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-45	9382	-45	-8110	5prime_fragment	FALSE	canonical	0	0	junction_3	31.3723161756065	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-73729378	True	NA	NA	False	AATAAA	-25	NA	73730514	73725224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_12322.nic	chr10	-	1296	4	ISM	ENSG00000242288.9	ENST00000399449.3	3810	19	-53	50930	-53	-50930	5prime_fragment	FALSE	canonical	3	21	junction_3	22.1259023670348	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-73729383	True	NA	NA	False	AATAAA	-25	NA	73730519	73725224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730438
transcript_12323.nnic	chr10	+	1227	3	FSM	ENSG00000250959.3	ENST00000686626.1	897	3	-330	0	-307	0	multi-exon	FALSE	canonical	2	6	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGCACTGCC	NA	False	NA	8	True	AATAAA	-16	NA	73730254	73737787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73730874_73731187_73731256_73737247
transcript_12324.nnic	chr10	-	507	2	Genic_Genomic	ENSG00000279088.1	novel	1236	1	NA	NA	-245	31	multi-exon	FALSE	canonical	3	41	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGCGTGAATT	-73744446	True	NA	-3	True	AATAAA	-17	NA	73744475	73742963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr10_-_73743212_73744216
transcript_12325.known	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	-73744215	False	NA	-34	True	NA	NA	NA	73744230	73742994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73743000_73744200
transcript_12328.known	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	42.3223560093459	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736147	True	NA	13	True	AATAAA	-17	NA	73744371	73772161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_1233.known	chr1	-	336	4	FSM	ENSG00000132881.12	ENST00000434014.1	336	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACGTGCCCGAGCGG	-16236409	False	NA	NA	False	NA	NA	NA	16236659	16232280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16232298_16232509_16232647_16233611_16233765_16236630
transcript_12331.nnic	chr10	+	2323	10	NIC	ENSG00000176986.16	novel	4513	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	209.074917165246	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736147	True	NA	13	True	AATAAA	-17	NA	73744371	73772161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_73744438_73746629_73746717_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_12333.nnic	chr10	+	2258	9	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	171.800711217969	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736125	True	NA	13	True	AATAAA	-17	NA	73744349	73772161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_73744438_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_12335.known	chr10	+	850	3	FSM	ENSG00000172586.8	ENST00000372833.6	850	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	43	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCAGATATGTTT	73766423	True	NA	12	True	AATAAA	-21	NA	73782047	73783652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73782200_73782322_73782442_73783073
transcript_12336.known	chr10	+	1202	2	FSM	ENSG00000172586.8	ENST00000372837.3	1202	2	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCCTTTTGTTGTGA	73782035	False	NA	15	True	AATAAA	-14	NA	73782046	73783371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73782200_73782322
transcript_12337.known	chr10	-	3818	21	FSM	ENSG00000148660.21	ENST00000322680.7	3818	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	26.6054035864897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871519	True	NA	0	True	AATAAA	-18	NA	73874591	73812500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73819531_73819646_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_12338.nic	chr10	-	1875	20	NIC	ENSG00000148660.21	novel	1820	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	14.9078424767979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	-73871477	True	NA	NA	False	AAGAAA	-10	NA	73874549	73814287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_12341.known	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	18.3541968827262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871447	True	NA	0	True	AATAAA	-18	NA	73874519	73812500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_12343.known	chr10	+	2343	11	FSM	ENSG00000122861.16	ENST00000372764.4	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	13.9789126901916	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATCTCCCTGGTGCT	73910540	True	NA	24	True	AATAAA	-29	NA	73911131	73917494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73911219_73911524_73911613_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
transcript_12344.known	chr10	+	6489	21	FSM	ENSG00000035403.18	ENST00000372755.7	6489	21	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_5	102.551194532292	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCAGGAAAGAATCATTT	73953368	True	NA	NA	False	AATAAA	-17	NA	73998113	74121363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74114183_74114388_74114794_74114900_74118022
transcript_12347.nnic	chr10	-	3869	10	NIC	ENSG00000185009.13	novel	2320	10	NA	NA	-16	1198	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	119.770150241573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGATTTTTTTTAGGT	-74148180	True	NA	NA	False	AATAAA	-14	NA	74150773	74121765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150334
transcript_12348.known	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	106.121639966294	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-74150630	False	NA	-15	True	ATTAAA	-10	NA	74150842	74122963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
transcript_12354.known	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_8	79.7134516565429	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-74148235	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
transcript_12362.known	chr10	+	1992	11	FSM	ENSG00000156110.15	ENST00000539909.6	1992	11	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	74.4782518591837	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74149673	True	NA	7	True	AATAAA	-19	NA	74151220	74709290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_12368.known	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	50.3444137914029	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74174330	True	NA	7	True	AATAAA	-19	NA	74176762	74709290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_12372.known	chr10	+	2494	10	FSM	ENSG00000156110.15	ENST00000673352.1	2494	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	138.834656078355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	74149692	True	NA	NA	False	NA	NA	NA	74151239	74709926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74670182_74670270_74708320
transcript_12376.known	chr10	+	1249	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_6	136.114965931808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	74149654	True	NA	6	True	ATTAAA	-18	NA	74151201	74708699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_1239.nnic	chr1	-	2540	11	NNC	ENSG00000037637.11	novel	6227	10	NA	NA	7	427	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	76.2053147752832	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTCTGTGGCTTTT	-16349844	True	NA	-4	True	NA	NA	NA	16352473	16250654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16316436_16316572_16352254
transcript_12399.known	chr10	+	6761	6	FSM	ENSG00000156671.15	ENST00000542569.6	6761	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	15.587174214719	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	75110496	True	NA	NA	False	AATAAA	-17	NA	75111655	75182123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75111723_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_124.known	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2881	junction_1	0	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_4104_5007
transcript_1240.known	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	17.2240142436851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-16349851	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
transcript_12402.nnic	chr10	-	1239	6	NNC	ENSG00000079393.21	novel	1129	6	NA	NA	2600	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	4.57820925690384	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75106380	True	NA	NA	False	AATAAA	-18	NA	75106499	75094435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75103893_75104098_75106397
transcript_12403.nnic	chr10	-	1075	5	NNC	ENSG00000079393.21	novel	1110	5	NA	NA	2560	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	4.63680924774785	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75106420	True	NA	NA	False	AATAAA	-18	NA	75106539	75094435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75106397
transcript_12414.known	chr10	+	1424	10	FSM	ENSG00000165637.14	ENST00000543351.5	1424	10	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	908.496451544603	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	75210129	False	NA	10	True	AATAAA	-11	NA	75210153	75231444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75210213_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_12425.known	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2672	junction_4	152.087775176129	2542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	75210457	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_1244.known	chr1	+	3480	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	284.465580811926	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353651	True	NA	20	True	TATAAA	-33	NA	16367241	16398145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
transcript_12446.known	chr10	-	2963	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCTCTCTGGTGTCTA	-77637783	False	NA	NA	False	AATAAA	-22	NA	77637821	77634109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_77636516_77637264
transcript_12447.nnic	chr10	+	465	2	NNC	ENSG00000233871.2	novel	487	2	NA	NA	-1322	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGTTCTTGTTTTAA	NA	False	NA	5	True	AATAAA	-15	NA	77926049	77929825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_77926278_77929588
transcript_12448.known	chr10	+	487	2	FSM	ENSG00000233871.2	ENST00000449852.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGGTTCTTGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	77927371	77929824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_77927623_77929588
transcript_12450.known	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_13	23.5518340875799	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-78025007	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_1246.known	chr1	+	892	4	FSM	ENSG00000055070.17	ENST00000471507.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	294.462599021034	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGGGGGACCCAGCAAG	16367057	False	NA	NA	False	NA	NA	NA	16367087	16395406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16391374_16391425_16393230_16393483_16395037
transcript_12465.known	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5910.82855338403	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	77943727	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_12470.known	chr10	+	2146	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	78038492	False	NA	18	True	AATAAA	-17	NA	78038555	78040701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78038600_78040700
transcript_12471.known	chr10	+	656	6	FSM	ENSG00000138326.21	ENST00000435275.5	656	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	5499.53352930955	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTGCAGTTTCCT	77943570	True	NA	30	True	AATAAA	-29	NA	78033759	78040713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040200_78040226_78040614
transcript_12472.known	chr10	+	634	5	FSM	ENSG00000138326.21	ENST00000613865.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	5804	junction_4	3360.69869037675	8690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	77943570	True	NA	33	True	AATAAA	-32	NA	78033759	78040716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_12473.known	chr10	+	583	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	5899.16990629473	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	77943646	True	NA	18	True	AATAAA	-17	NA	78033835	78040701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
transcript_12474.known	chr10	+	534	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	0	0	0	multi-exon	FALSE	canonical	3	4485	junction_4	4239.05690454846	5707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	77943673	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
transcript_12475.known	chr10	+	3307	6	FSM	ENSG00000138326.21	ENST00000645698.1	3307	6	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_4	5477.8888415155	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	77943684	True	NA	33	True	AATAAA	-32	NA	78033873	78040716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037438_78040226_78040614
transcript_12476.known	chr10	+	2196	6	FSM	ENSG00000108179.14	ENST00000225174.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	19.4894843441277	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGTCTCAAGTATTT	79336051	True	NA	NA	False	AATAAA	-1	NA	79347468	79355334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353706
transcript_12478.known	chr10	-	1051	7	FSM	ENSG00000225484.7	ENST00000484794.6	1051	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.3139672369217	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCTTTAAGTTCTAGGA	-79826239	False	NA	NA	False	AATAAA	-16	NA	79826250	79797388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_79798028_79801949_79802004_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_12479.known	chr10	+	481	6	FSM	ENSG00000133678.14	ENST00000372274.5	481	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	97.1110704296889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTACATTCATCCTC	80075716	True	NA	NA	False	AAAACA	-29	NA	80078691	80090938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80086230_80086259_80090379_80090432_80090796
transcript_1248.known	chr1	+	3401	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	247.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	16353674	True	NA	17	True	TATAAA	-30	NA	16367264	16398142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16393230_16393483_16395037
transcript_12481.known	chr10	+	860	5	FSM	ENSG00000133678.14	ENST00000372275.5	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	100.614052199482	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCTGCACTAAGATAAAG	80075706	True	NA	NA	False	NA	NA	NA	80078681	80091335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_12483.nic	chr10	+	2143	5	NIC	ENSG00000133678.14	novel	2041	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	98.5139584018427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	80075689	True	NA	16	True	AATAAA	-20	NA	80078664	80092551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_80078787_80081639_80081742_80081840_80081945_80082144_80082205_80090796
transcript_12485.known	chr10	+	878	5	FSM	ENSG00000133678.14	ENST00000483732.5	878	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	97.6140358759948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTTAGTCAGTTTTTTC	80078870	False	NA	NA	False	NA	NA	NA	80079327	80091050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079693_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_12487.known	chr10	+	847	5	FSM	ENSG00000133678.14	ENST00000463029.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	94.0438727403333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGACACTTCCACTA	80078815	True	NA	NA	False	NA	NA	NA	80079272	80091349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079308_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_12489.known	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	93.1541061896898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	80078837	False	NA	NA	False	NA	NA	NA	80079294	80091352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_12491.nic	chr10	+	500	4	ISM	ENSG00000133678.14	ENST00000372277.7	366	5	16	3971	-3	0	5prime_fragment	FALSE	canonical	3	29	junction_3	87.2900656177755	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATTTACTTTCCAAAA	80075686	True	NA	NA	False	ACTAAA	-24	NA	80078661	80086441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_80078787_80081840_80081945_80082144_80082205_80086230
transcript_12492.known	chr10	+	2041	4	FSM	ENSG00000133678.14	ENST00000372281.8	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	19.5959179422654	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	80075689	True	NA	16	True	AATAAA	-20	NA	80078664	80092551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090796
transcript_12494.known	chr10	+	824	4	FSM	ENSG00000133678.14	ENST00000472622.5	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	95.7264621489563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTCCTCTCCTTTCCA	NA	False	NA	NA	False	AAAACA	-19	NA	80078645	80091302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082218_80090796
transcript_12497.known	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	94.4504573249325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	80078812	True	NA	22	True	AATAAA	-26	NA	80079269	80092557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
transcript_12498.known	chr10	+	2154	5	FSM	ENSG00000133678.14	ENST00000613758.4	2154	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	97.3508474539385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAATGCTTTTCTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	80078645	80092550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_12499.known	chr10	-	6734	16	FSM	ENSG00000122359.18	ENST00000422982.8	6734	16	0	0	0	0	multi-exon	TRUE	canonical	2	204	junction_15	69.7564015381782	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-80198054	True	NA	-2	True	AATAAA	-18	NA	80205537	80150888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80176106_80176156_80205342
transcript_1250.known	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	261.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353634	True	NA	20	True	TATAAA	-33	NA	16367224	16398145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16393227_16393483_16395037
transcript_12503.known	chr10	+	1863	5	FSM	ENSG00000133665.13	ENST00000256039.3	1863	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	12.0908022893437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTGTGACTGGCT	80356536	True	NA	7	True	TATAAA	-18	NA	80356780	80368073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80356826_80357892_80358046_80362434_80362591_80362950_80363074_80366687
transcript_12505.nnic	chr10	+	924	5	NNC	ENSG00000133665.13	novel	1863	5	NA	NA	37	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0958008537088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCAAGTGGCTGTGACT	80356573	True	NA	NA	False	AATAAA	-24	NA	80356817	80367153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_80356844_80357892_80358046_80362434_80362591_80362950_80363074_80366687
transcript_12506.known	chr10	+	439	4	FSM	ENSG00000133665.13	ENST00000411538.5	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.02768199119819	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGATTCCAGGAATGC	80356528	True	NA	NA	False	NA	NA	NA	80356772	80366794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80356826_80362434_80362591_80362950_80363074_80366687
transcript_12515.known	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	67.8539608276481	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	80403694	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_12517.known	chr10	+	1723	6	FSM	ENSG00000122378.14	ENST00000372185.5	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	124.613642912805	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGTATAAGATTTTC	80403637	True	NA	28	True	AATAAA	-19	NA	80408493	80432997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80408644_80420482_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_12524.known	chr10	+	16183	9	FSM	ENSG00000108219.15	ENST00000429989.7	16183	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	27.617928959283	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCATTTTTCTCC	80454096	False	NA	NA	False	TATAAA	-16	NA	80454165	80533123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_12528.known	chr10	+	2382	9	FSM	ENSG00000165678.22	ENST00000372134.6	2382	9	0	0	0	0	multi-exon	FALSE	canonical	3	1257	junction_1	148.761921791163	1210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTGAGGTGATTGCT	84120807	True	NA	NA	False	AATGAA	-17	NA	84139508	84153568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_84139594_84141461_84141630_84142654_84142755_84143994_84144107_84144874_84145017_84148729_84148839_84150054_84150244_84150708_84150881_84152263
transcript_1253.known	chr1	+	981	9	FSM	ENSG00000157191.20	ENST00000459640.5	981	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	198.002170126996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAAGCCCTCCTCAGCT	16433621	True	NA	NA	False	NA	NA	NA	16440755	16458956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16450124_16450242_16451837_16452016_16455817_16455894_16458841
transcript_12539.nnic	chr10	+	1158	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2511	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	37.0059454682623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86956069	False	NA	16	True	AATAAA	-17	NA	86956087	86963258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_86956426_86958534_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12541.nnic	chr10	+	1034	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2418	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	37.1935478275467	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86955935	True	NA	16	True	AATAAA	-17	NA	86956180	86963258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86959978_86960129_86962603_86962676_86962964
transcript_12542.nnic	chr10	+	1012	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2418	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	22.0181743112366	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86955935	True	NA	16	True	AATAAA	-17	NA	86956180	86963258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12544.known	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	5.30919014539883	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86958211	True	NA	16	True	AATAAA	-17	NA	86958598	86963258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12545.known	chr10	+	794	4	FSM	ENSG00000173267.14	ENST00000483064.1	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	4.49691252107735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86959319	True	NA	16	True	AATAAA	-17	NA	86959374	86963258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12548.known	chr10	+	3601	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	28.3783955383904	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	87092226	True	NA	6	True	AATAAA	-17	NA	87095205	87191465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_12549.known	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	50.8226081581809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	87092216	True	NA	4	True	AATAAA	-15	NA	87095195	87191463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_12552.nnic	chr10	+	2154	8	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	61872	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	70.8911208855394	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	87156985	True	NA	6	True	AATAAA	-17	NA	87157077	87191465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_87157260_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_12559.nnic	chr10	-	770	6	NIC	ENSG00000223482.9	novel	5671	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	95.8611495862636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCAGTTTTGTTTTTAT	-87342322	False	466	-12	True	AATAAA	-17	NA	87342370	87208170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_87208513_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12560.known	chr10	-	855	6	FSM	ENSG00000223482.9	ENST00000433530.7	916	6	61	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	95.2289871835252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAAAAAGATTGTCCA	-87342297	False	NA	NA	False	ATTAAA	-40	NA	87342345	87238397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87238850_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12563.known	chr10	-	6174	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	87.5588944653826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGTTGTTGAGTGA	-87342388	False	NA	NA	False	ACTAAA	-35	NA	87342436	87240175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12565.known	chr10	-	511	5	FSM	ENSG00000223482.9	ENST00000663644.1	511	5	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	105.920666066637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATCTGAAAACAATGTC	-87342318	False	NA	NA	False	AATAAA	-20	NA	87342366	87207623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87207809_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12567.known	chr10	-	532	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	4	0	-1	multi-exon	FALSE	canonical	2	7	junction_1	104.658969993021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCTCTATTGTTTAA	-87342345	False	NA	-3	True	AATAAA	-14	NA	87342393	87238670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12568.known	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	115.569243313262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342318	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_12570.known	chr10	-	1446	5	FSM	ENSG00000223482.9	ENST00000417860.7	2036	5	0	590	0	-590	multi-exon	FALSE	canonical	3	27	junction_3	99.5866456910765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCACTTCATGTAACA	-87342343	False	466	NA	False	AATAAA	-17	NA	87342391	87319255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87320200_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_12572.known	chr10	-	4023	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	0	1	0	multi-exon	FALSE	canonical	3	201	junction_2	28.9405520948643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCATTTCACAATT	-87342340	False	NA	NA	False	NA	NA	NA	87342388	87284766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12573.known	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	48	junction_1	91.3831980666517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	-87342329	False	466	NA	False	AATGAA	-4	NA	87342377	87319187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
transcript_12575.known	chr10	-	3270	3	FSM	ENSG00000223482.9	ENST00000662586.1	3270	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	125.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTATTTACGTATGA	-87342506	False	NA	NA	False	AATAAA	-10	NA	87342554	87331961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87334815_87336785_87336890_87342241
transcript_12576.known	chr10	+	2470	5	FSM	ENSG00000107789.16	ENST00000371996.9	2470	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	35.4568399607184	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGACTCACCTGGCAAT	87502449	True	NA	88	True	AATACA	-38	NA	87504892	87553461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87505553_87508335_87508534_87513123_87513222_87521035_87521170_87552081
transcript_12577.known	chr10	+	2183	3	FSM	ENSG00000107789.16	ENST00000371994.8	2183	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	175.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAGGACTTTTCTCTTC	87502431	True	NA	15	True	AATAAA	-20	NA	87504874	87553388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87505553_87508335_87508534_87552081
transcript_12578.known	chr10	+	3949	12	FSM	ENSG00000198682.13	ENST00000361175.8	3949	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	17.7768537409076	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	87659369	False	NA	15	True	AATAAA	-15	NA	87659612	87747705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_12582.known	chr10	-	4045	11	FSM	ENSG00000138138.14	ENST00000681308.1	4045	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	145.80617270884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAATAAATTGGATG	-87811833	True	NA	-31	True	NA	NA	NA	87818213	87751877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87789039_87789130_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_12585.known	chr10	-	4640	10	FSM	ENSG00000138138.14	ENST00000308448.11	4640	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	76.9617509618324	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-87811780	True	NA	NA	False	ATTAAA	-19	NA	87818160	87751511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87817794
transcript_12586.known	chr10	-	4334	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_9	56.9179613214287	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-87811846	True	NA	NA	False	ATTAAA	-19	NA	87818226	87751511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_12599.known	chr10	+	470	2	FSM	ENSG00000223820.5	ENST00000415212.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCAGCTTGTGCCTTT	87818311	False	NA	NA	False	NA	NA	NA	87818424	87819081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87818715_87818901
transcript_1260.known	chr1	+	2018	8	FSM	ENSG00000157191.20	ENST00000337132.10	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	47.5660657637869	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTGAAAGATGAATG	16433589	True	NA	11	True	AATAAA	-18	NA	16440723	16460078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_12601.nic	chr10	-	1368	2	ISM	ENSG00000138138.14	ENST00000681308.1	4045	11	-61	61475	-48	-28801	5prime_fragment	FALSE	canonical	3	186	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACTAGTTTGAGTATA	-87811894	True	NA	NA	False	TTTAAA	-13	NA	87818274	87813352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_87814613_87818166
transcript_12602.known	chr10	-	2409	7	FSM	ENSG00000184719.12	ENST00000331772.9	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	5.43905629069357	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTAATGTCACTTA	-88582946	True	NA	NA	False	AATAAA	-24	NA	88583318	88284101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_88285507_88314465_88314642_88362551_88362726_88572902_88573062_88581566_88581710_88582201_88582308_88583072
transcript_12604.known	chr10	+	2021	11	FSM	ENSG00000138134.12	ENST00000371926.8	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.07389567353096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTGTATTTATAGAG	88879713	True	NA	7	True	AATAAA	-16	NA	88880244	88923487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88923167
transcript_12607.known	chr10	+	3696	9	FSM	ENSG00000026103.23	ENST00000652046.1	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	5.02493781056044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGCTGTTGATTAT	88990767	True	NA	NA	False	ATTAAA	-15	NA	88990797	89017059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_12609.nic	chr10	-	1617	9	Fusion	ENSG00000286116.1_ENSG00000107796.13	novel	1349	9	NA	NA	7	0	multi-exon	FALSE	canonical	1	2	junction_8	5.93717104351896	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCGTTGGCCTCCGA	-88991168	True	NA	0	True	AATAAA	-22	NA	88991332	88935073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr10_-_88935367_88938060_88938243_88939506_88939699_88941228_88941391_88941784_88941870_88943796_88943908_88947257_88947387_88948801_88948954_88991021
transcript_1261.known	chr1	+	935	8	FSM	ENSG00000157191.20	ENST00000457722.6	935	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	152.209308090497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGGGATTCAAGTATG	16433589	True	NA	NA	False	AGTAAA	-20	NA	16440723	16459073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440776_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_12610.known	chr10	+	1044	8	FSM	ENSG00000026103.23	ENST00000357339.6	1044	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	6.6944997222057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAAAAACAACAAATTCA	88990756	False	NA	NA	False	AATGAA	-19	NA	88990777	89014450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89011998_89012082_89013342_89013368_89014118
transcript_12611.known	chr10	+	4184	11	FSM	ENSG00000138134.12	ENST00000371927.7	4184	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	12.2898331965898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTCA	NA	False	NA	NA	False	ATTAAA	-45	NA	88879733	88975153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88973181
transcript_12614.nnic	chr10	-	2563	10	NNC	ENSG00000107798.18	novel	2496	10	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	118.82116451122	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	-89247304	True	NA	-6	True	AATAAA	-26	NA	89251812	89213571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251706
transcript_12615.known	chr10	-	2496	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_9	25.7552583627758	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	-89247267	True	NA	-6	True	AATAAA	-26	NA	89251775	89213571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
transcript_12618.nic	chr10	+	391	2	ISM	ENSG00000232110.9	ENST00000680136.1	438	3	1238	-1	-763	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTGAGCATCTT	89284994	True	NA	NA	False	AATAAA	-18	NA	89285012	89292125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89285265_89291986
transcript_12621.known	chr10	+	4302	2	FSM	ENSG00000185745.10	ENST00000371804.4	4302	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCTGCACTGCT	89392501	True	NA	NA	False	AATAAA	-16	NA	89392622	89406487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89392718_89402280
transcript_12622.known	chr10	+	4029	2	FSM	ENSG00000152778.10	ENST00000371795.5	4029	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTGTCCTGCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	89414567	89420997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89414804_89417204
transcript_12626.known	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	69.4686180148194	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-89643877	False	NA	-13	True	AATAAA	-18	NA	89643887	89582987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
transcript_12628.known	chr10	-	2513	6	FSM	ENSG00000152782.18	ENST00000322191.10	2513	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	95.1659603009395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-89643864	False	NA	-13	True	AATAAA	-18	NA	89643874	89582987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89599251_89599506_89611695_89612049_89643696
transcript_1263.known	chr1	+	1929	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	168.360146379388	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	16433601	True	NA	10	True	AATAAA	-17	NA	16440735	16460077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
transcript_12632.known	chr10	+	2069	4	FSM	ENSG00000232936.6	ENST00000660192.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAACATGCCTAAGTC	89645182	True	NA	NA	False	NA	NA	NA	89645271	89652144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89645500_89648922_89648999_89650058_89650232_89650552
transcript_12633.known	chr10	+	445	4	FSM	ENSG00000232936.6	ENST00000451733.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.90668171555645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	89645352	False	NA	NA	False	ATTAAA	-16	NA	89645441	89650667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89645500_89648922_89649022_89650058_89650232_89650552
transcript_12638.nnic	chr10	-	1258	3	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	12	-8455	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	-89643934	False	898	-8	True	AATAAA	-13	NA	89643944	89634149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_89635066_89639148_89639243_89643696
transcript_12639.nic	chr10	-	1176	2	NIC	ENSG00000152782.18	novel	572	4	NA	NA	21	-1	intron_retention	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGGTGTTTCTATTT	-89643925	False	898	48	True	AATAAA	-19	NA	89643935	89625695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_89626633_89643696
transcript_12640.nnic	chr10	-	1159	2	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	17	-8455	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	-89643929	False	898	-8	True	AATAAA	-13	NA	89643939	89634149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_89635066_89643696
transcript_12641.known	chr10	+	563	4	FSM	ENSG00000232936.6	ENST00000454174.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	89645192	True	NA	NA	False	ATTAAA	-16	NA	89645281	89650667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89645458_89648922_89649022_89650058_89650232_89650552
transcript_12642.known	chr10	+	6306	33	FSM	ENSG00000138182.15	ENST00000260753.8	6306	33	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_17	31.6828614701624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTGTGCCTGGCTT	89693348	True	NA	34	True	AATAAA	-18	NA	89701609	89774939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386_89738618_89738957_89739097_89743807_89743928_89745898_89745960_89751345_89751472_89752566_89752692_89754517_89754674_89758705_89758883_89760525_89760637_89762637_89762836_89768289_89768392_89768737_89768889_89772688_89772832_89773970
transcript_12645.nic	chr10	+	2780	20	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	11	37394	-9	26450	5prime_fragment	FALSE	canonical	3	51	junction_15	50.9843819440431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGGAAGAAAAAGCAG	89693339	True	NA	NA	False	AATGAA	-45	NA	89701600	89737540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726292_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386
transcript_12646.nic	chr10	+	2671	20	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-20	37399	0	26450	5prime_fragment	FALSE	canonical	3	195	junction_17	26.078827871626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGGAAGAAAAAGCAG	89693328	True	NA	NA	False	AATGAA	-45	NA	89701589	89737540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386
transcript_12651.nic	chr10	+	1927	14	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	-60	50918	-60	12926	5prime_fragment	TRUE	canonical	3	207	junction_13	25.2530389523986	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATTAACCTTGGAAT	89701518	False	NA	NA	False	GATAAA	-10	NA	89701529	89724016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963
transcript_12654.nic	chr10	+	1794	13	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-7	55240	-7	8609	5prime_fragment	FALSE	canonical	3	210	junction_2	23.3397312657099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGTATGTATTAAGA	89693341	True	NA	NA	False	GATAAA	-39	NA	89701602	89719699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418
transcript_12655.nic	chr10	+	968	8	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	11	59805	-9	4039	5prime_fragment	FALSE	canonical	3	210	junction_2	25.1501612767175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGATGCTGCGCCTTT	89693339	True	NA	NA	False	AATATA	-41	NA	89701600	89715129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954
transcript_12660.nic	chr10	+	712	6	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	0	63844	0	0	5prime_fragment	FALSE	canonical	3	210	junction_2	25.772853935876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	89693328	True	NA	NA	False	NA	NA	NA	89701589	89711090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_12670.known	chr10	+	1466	10	FSM	ENSG00000148688.14	ENST00000487998.5	1466	10	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	27.1897765827026	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTTCATTTGGAG	90862469	True	NA	12	True	AATAAA	-13	NA	90871972	90900762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895484_90895879_90895918_90896312_90896393_90900569
transcript_12671.known	chr10	+	2332	11	FSM	ENSG00000148688.14	ENST00000371703.8	2332	11	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	28.2283545393634	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGACCAGGTGAAATT	90862470	True	NA	12	True	AATAAA	-28	NA	90871973	90902191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569
transcript_12672.known	chr10	-	1790	9	FSM	ENSG00000148677.7	ENST00000371697.4	1790	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.330718913883074	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAGTCCTTCTATAAG	-90920972	True	NA	NA	False	AATAAA	-18	NA	90921087	90912095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_90912977_90915542_90915642_90915781_90915881_90916170_90916270_90917731_90917831_90918864_90918973_90919130_90919269_90920168_90920349_90921000
transcript_12673.known	chr10	+	973	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGTATTTTTCCT	91220020	True	NA	NA	False	AATAAA	-35	NA	91220782	91227960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_91220837_91222688_91222984_91227336
transcript_12674.nic	chr10	+	2114	5	NIC	ENSG00000165338.17	novel	395	3	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	12.3970762682174	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTGTCTTATTCCCA	91408962	True	NA	NA	False	AATAAA	-15	NA	91409249	91463664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_91409422_91425280_91425411_91460426_91460566_91461253_91461357_91462094
transcript_12675.known	chr10	-	2541	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	-91632860	True	NA	2	True	AATAAA	-15	NA	91633071	91628441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_91630867_91632955
transcript_12676.known	chr10	-	609	2	FSM	ENSG00000228701.3	ENST00000432246.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAGAGCCTTCAGAGAG	-91798139	False	NA	-100	True	AAGAAA	-8	NA	91798196	91782935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_91783161_91797812
transcript_12677.known	chr10	+	571	2	FSM	ENSG00000272817.1	ENST00000610263.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGATTCCTTGGAA	NA	False	NA	15	True	AATAAA	-16	NA	91908130	91909348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_91908250_91908896
transcript_12679.known	chr10	+	3922	6	FSM	ENSG00000198060.10	ENST00000358935.3	3922	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	20.2780669690185	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTGTACTTTGTTAAA	92289369	True	NA	7	True	AATAAA	-15	NA	92291166	92353964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92291530_92311134_92311338_92340672_92340804_92349348_92349533_92349670_92349838_92351090
transcript_1268.known	chr1	+	572	2	FSM	ENSG00000157191.20	ENST00000486390.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTATGGCTATTTTG	16433601	True	NA	11	True	ATTAAA	-29	NA	16440735	16441619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16441165
transcript_12680.known	chr10	-	5894	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	0	0	0	0	multi-exon	TRUE	canonical	3	247	junction_11	20.5385393156919	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-92570839	True	NA	NA	False	NA	NA	NA	92574093	92451683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_12683.known	chr10	+	5016	22	FSM	ENSG00000138160.7	ENST00000260731.5	5016	22	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_1	35.4721953646927	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGCTCCATAATTTC	92581090	True	NA	37	True	AATAAA	-18	NA	92593129	92655395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637386_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_12685.known	chr10	+	1605	4	FSM	ENSG00000152804.11	ENST00000472590.6	1605	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.4560308258262	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTGCAAGTCTAATTCT	92691537	False	NA	10	True	AATAAA	-22	NA	92691819	92695641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92692100_92692367_92692547_92692701_92692753_92694546
transcript_12686.known	chr10	+	3564	22	FSM	ENSG00000138190.17	ENST00000260762.10	3564	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_18	6.46532702303134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	92848024	True	NA	14	True	ATTAAA	-24	NA	92848519	93059490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338_92928423_92934143_92934191_92934309_92934431_92935813_92935886_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_12687.nic	chr10	+	1018	7	ISM	ENSG00000138190.17	ENST00000443748.6	3310	18	-16	143463	-16	0	5prime_fragment	FALSE	canonical	3	30	junction_5	2.85287379477061	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGTCAAAATGGAGT	92847956	True	NA	NA	False	AATAAA	-17	NA	92848451	92916030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757
transcript_12688.known	chr10	+	2714	5	FSM	ENSG00000138190.17	ENST00000371543.5	2714	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2.77263412660235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGAGCGTGGTGGCGCG	92847989	True	NA	NA	False	NA	NA	NA	92848484	92901851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598
transcript_12689.known	chr10	+	2245	7	FSM	ENSG00000095596.12	ENST00000371531.5	2245	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7.11805216802087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAGAACTGTTCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93073474	93077884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93073835_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_1269.known	chr1	-	1695	12	FSM	ENSG00000080947.15	ENST00000591348.5	1695	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	4.55997680144889	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATGTCTGATATA	-16490581	False	NA	-7	True	AATAAA	-16	NA	16491082	16468921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16469008_16475824_16476063_16476398_16476505_16476929_16477075_16478254_16478438_16483286_16483487_16484232_16484465_16485568_16485666_16489684_16489792_16490617_16490784_16490864_16490927_16491009
transcript_12690.known	chr10	+	2117	7	FSM	ENSG00000095596.12	ENST00000224356.5	2117	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.98377435700541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAACTGTTCTCTGA	93073845	True	NA	NA	False	AATAAA	-17	NA	93073892	93077885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_12692.known	chr10	+	1456	6	FSM	ENSG00000095596.12	ENST00000624589.3	1456	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.3072789813801	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAATTTGAAGGTACTT	93074264	False	NA	NA	False	ATTAAA	-29	NA	93074311	93077479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93074533_93074798_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_1270.known	chr1	+	1110	1	FSM	ENSG00000261135.1	ENST00000562878.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACTCATCTTTGAC	16514628	True	NA	4	True	AATAAA	-16	NA	16514644	16515754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16514600_16515800
transcript_12706.nnic	chr10	-	1429	15	NNC	ENSG00000148690.12	novel	3109	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_14	129.615069828051	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGGCTTTGGAAGTT	-93698423	True	NA	-4	True	AATAAA	-20	NA	93702588	93669678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93701675_93701796_93702374
transcript_12711.nnic	chr10	-	1510	14	NNC	ENSG00000148690.12	novel	3109	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	99.6204037939568	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGGCTTTGGAAGTT	-93698423	True	NA	-4	True	AATAAA	-20	NA	93702588	93669678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702173
transcript_12712.known	chr10	-	3109	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_13	30.9083393890222	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTGTAGTGTGTAAAAA	-93698427	True	NA	NA	False	AATAAA	-19	NA	93702592	93667882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_12726.nic	chr10	-	933	11	ISM	ENSG00000148690.12	ENST00000359204.5	3109	14	-21	13690	-21	2482	5prime_fragment	FALSE	canonical	3	330	junction_10	33.3760393096605	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGATAAAACCAAAAAA	-93698448	True	NA	NA	False	AAGAAA	-16	NA	93702613	93681572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_1273.nic	chr1	-	1223	4	NIC	ENSG00000219481.11	novel	5932	29	NA	NA	-12	-441	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	51.3830927662225	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATGTCCAAATACAT	-16610786	True	NA	NA	False	NA	NA	NA	16613546	16594002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_16594662_16594930_16595014_16608507_16608780_16613337
transcript_12734.known	chr10	+	3488	3	FSM	ENSG00000176273.15	ENST00000427197.2	3488	3	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	12	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGTTGTTATGATTA	93892853	True	NA	NA	False	AATAAA	-20	NA	93893977	93903824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93894212_93898570_93898752_93900751
transcript_12739.known	chr10	-	3455	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	21.817653402692	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATATGATAATTT	-94358081	True	NA	-2	True	AATAAA	-25	NA	94362939	94333225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_12740.nic	chr10	-	1476	11	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-37	13250	-17	0	5prime_fragment	FALSE	canonical	3	195	junction_4	18.2945347030199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	-94358118	True	NA	47	True	AATAAA	-10	NA	94362976	94346475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_12741.nic	chr10	-	834	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-37	21737	-17	6361	5prime_fragment	FALSE	canonical	3	212	junction_3	8.58836422143355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGTATTAATTTCTT	-94358118	True	NA	NA	False	NA	NA	NA	94362976	94354962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_12748.nic	chr10	+	3105	22	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	86.3166401007166	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	94501729	True	NA	19	True	AATAAA	-17	NA	94545764	94602098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_1275.nic	chr1	-	410	4	ISM	ENSG00000215908.10	ENST00000639456.1	2575	13	-29	16758	-29	-5361	5prime_fragment	FALSE	canonical	3	42	junction_3	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642332	True	NA	NA	False	AAAAAG	-20	NA	16644715	16635030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_16635169_16642766_16642851_16643027_16643146_16644645
transcript_12756.known	chr10	+	711	8	FSM	ENSG00000119969.15	ENST00000419900.5	711	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	119.263043183493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTACCTTTTCAACAACC	94501754	True	NA	NA	False	ACTAAA	-37	NA	94545789	94574106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959
transcript_1276.nnic	chr1	-	425	3	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	4	-5361	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	8	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642296	True	NA	NA	False	AAAAAG	-20	NA	16644679	16635030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_16635169_16643027_16643146_16644510
transcript_12760.nic	chr10	+	482	5	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-25	11379	-23	5531	5prime_fragment	FALSE	canonical	3	190	junction_1	152.427851785689	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	94501729	True	NA	18	True	NA	NA	NA	94545764	94562727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_12763.nic	chr10	+	389	3	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-25	19857	-23	-2947	5prime_fragment	FALSE	canonical	3	190	junction_1	190	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	94501729	True	NA	41	True	NA	NA	NA	94545764	94554249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545908_94546376_94546499_94554125
transcript_12764.known	chr10	+	3128	22	FSM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.2419538882157	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	94501752	True	NA	20	True	AATAAA	-18	NA	94545787	94602099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_12765.known	chr10	+	400	4	FSM	ENSG00000119969.15	ENST00000630929.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	234.762764414537	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTGCAAATTGAGAG	94501780	True	NA	NA	False	NA	NA	NA	94545815	94557196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94557178
transcript_12766.nnic	chr10	+	1049	8	NNC	ENSG00000173124.14	novel	2307	9	NA	NA	14689	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.903507902905251	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGGAGTATATTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	95209165	95228928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_95209239_95210649_95210794_95211877_95212035_95212857_95212941_95214851_95214976_95219890_95219972_95225289_95225392_95228643
transcript_12769.known	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_2	105.588430553099	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	-95270658	True	NA	-4	True	AATAAA	-16	NA	95291003	95237571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
transcript_1277.nnic	chr1	-	326	3	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-29	-5361	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642332	True	NA	NA	False	AAAAAG	-20	NA	16644715	16635030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_16635169_16643027_16643146_16644645
transcript_12770.known	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	486.408305850137	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-95270667	True	NA	NA	False	NA	NA	NA	95291012	95238009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
transcript_12777.known	chr10	-	3337	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_12	161.334165020209	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGTGCGTGATTGA	-95648529	True	NA	-15	True	AATAAA	-11	NA	95656706	95605944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
transcript_1278.known	chr1	-	164	1	FSM	ENSG00000207513.1	ENST00000384782.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16666948	16666784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16666800_16666900
transcript_12781.known	chr10	-	2552	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	75.9139188615835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95693989	95663413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12782.known	chr10	-	2518	14	FSM	ENSG00000119977.22	ENST00000371217.10	2518	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	121.237553500136	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-95689659	True	NA	-22	True	AATAAA	-27	NA	95693927	95663400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12787.nic	chr10	-	2019	13	NIC	ENSG00000119977.22	novel	2734	14	NA	NA	4	-181	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	156.038167517509	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGCTTTGGGCTCTG	-95689717	False	NA	0	True	AATAAA	-19	NA	95693985	95663876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12794.known	chr10	-	1464	10	FSM	ENSG00000119977.22	ENST00000371209.5	1464	10	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_7	45.2084336063063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAATGCTGCCTCCTT	-95689631	True	NA	NA	False	AATAAA	-29	NA	95693899	95683260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12796.known	chr10	-	2364	13	FSM	ENSG00000119977.22	ENST00000679984.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	133.716324940359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTCATTGTGAGGAAAAA	-95689679	True	NA	33	True	NA	NA	NA	95693947	95663450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12797.known	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	124.444850569774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-95689651	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_1280.known	chr1	+	164	1	FSM	ENSG00000207389.1	ENST00000384659.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	16740355	False	NA	NA	False	NA	NA	NA	16740515	16740679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16740500_16740700
transcript_12801.known	chr10	-	864	5	FSM	ENSG00000226688.8	ENST00000452942.6	864	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.6134025429682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATTTCTAAGCAGCAA	-95906852	True	NA	NA	False	NA	NA	NA	95907882	95875281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95875667_95876517_95876661_95897557_95897680_95904829_95904939_95907777
transcript_12803.known	chr10	-	2366	4	FSM	ENSG00000226688.8	ENST00000449419.6	2366	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	29.8477618740315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGTCCAATTAAACCC	-95906860	True	NA	-38	True	NA	NA	NA	95907890	95873777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95875667_95876517_95876661_95904829_95904936_95907662
transcript_12805.known	chr10	-	389	2	FSM	ENSG00000226688.8	ENST00000427300.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAACAAAAAGAA	-95906853	True	NA	NA	False	NA	NA	NA	95907883	95904655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95904939_95907777
transcript_12807.known	chr10	+	1241	8	FSM	ENSG00000188649.15	ENST00000423344.6	1241	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.9059520091609	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAAACACTGGCTACT	95907903	True	NA	NA	False	NA	NA	NA	95907964	95938723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_95908058_95911300_95911360_95913381_95913438_95922015_95922077_95924313_95924391_95924778_95924845_95927236_95927333_95937990
transcript_12819.known	chr10	+	612	1	FSM	ENSG00000236552.2	ENST00000439189.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2343	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	96749995	True	NA	NA	False	AATACA	-36	NA	96750287	96750899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_96750300_96750900
transcript_1282.known	chr1	-	3184	8	FSM	ENSG00000186715.11	ENST00000455405.6	3184	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.9259996296076	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTCTTGTTTGGATG	-16758842	False	NA	NA	False	AATAAA	-15	NA	16758872	16754909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16757394_16757517_16757658_16757753_16757861_16757941_16758089_16758215_16758294_16758465_16758587_16758674_16758712_16758802
transcript_12820.nic	chr10	+	1382	8	NIC	ENSG00000196233.14	novel	2213	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	14.3014199380655	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAAAGCTGCTGGA	96828958	True	NA	NA	False	AAAAAG	-25	NA	96832263	96958922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96958411
transcript_12823.known	chr10	-	5438	12	FSM	ENSG00000213390.11	ENST00000358531.9	5438	12	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_7	26.4990253991998	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGATTTGACTGGTC	-97287818	True	NA	-8	True	ATTAAA	-17	NA	97292637	97222178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_12827.known	chr10	+	805	2	FSM	ENSG00000225850.4	ENST00000445808.4	806	2	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACCCAGTAATTCC	97334551	False	NA	NA	False	ATTAAA	-23	NA	97334563	97343203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97334972_97342806
transcript_12828.known	chr10	-	4396	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_27	36.1813867290655	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-97397701	True	NA	-12	True	AATAAA	-17	NA	97401340	97356700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
transcript_12836.known	chr10	+	1802	4	FSM	ENSG00000171314.9	ENST00000334828.6	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	9259	junction_3	341.060112003735	8203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGATGTGGAAGAC	97367476	True	NA	1	True	AATAAA	-20	NA	97426190	97433444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97426447_97430378_97430654_97430954_97431136_97432354
transcript_1284.known	chr1	-	527	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	4	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889470	False	NA	-4	True	AATAAA	-27	NA	16889501	16888541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16888783_16889215
transcript_12840.known	chr10	+	1187	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	4365.83404275619	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	97368819	False	NA	NA	False	NA	NA	NA	97427533	97432690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
transcript_12845.known	chr10	+	497	2	FSM	ENSG00000171314.9	ENST00000473929.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTCATCTTTCCAAGG	97367578	False	NA	NA	False	AATAAA	-16	NA	97426292	97427443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97426447_97427100
transcript_12846.known	chr10	-	642	9	FSM	ENSG00000171311.13	ENST00000471049.5	642	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	341.854661186593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCAGCTGGTGTGAG	-97434911	True	NA	NA	False	NA	NA	NA	97445973	97436539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438662_97438704_97441170_97441260_97443236_97443312_97445452_97445607_97445731_97445848_97445954
transcript_12849.known	chr10	-	1145	8	FSM	ENSG00000171311.13	ENST00000370902.8	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_7	67.5610079551687	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGTTGGGTTGAAGTC	-97434944	True	NA	NA	False	NA	NA	NA	97446006	97435908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_1285.known	chr1	-	346	2	FSM	ENSG00000238142.3	ENST00000457075.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889618	False	NA	-4	True	AATAAA	-27	NA	16889649	16888541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16888786_16889547
transcript_12851.known	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	246.428319530582	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	-97434931	True	NA	33	True	AATAAA	-12	NA	97445993	97436247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
transcript_1286.known	chr1	-	1048	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889558	False	NA	-4	True	AATAAA	-27	NA	16889589	16888541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16888500_16889600
transcript_12861.known	chr10	-	564	6	FSM	ENSG00000171311.13	ENST00000485122.6	564	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	264.675348304295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTTTACGCTGTAG	-97434923	True	NA	-52	True	NA	NA	NA	97445985	97436332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_1287.known	chr1	+	164	1	FSM	ENSG00000207005.1	ENST00000384278.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTGGAGTTTCTAAAA	16895772	False	NA	NA	False	NA	NA	NA	16895979	16896143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16896000_16896100
transcript_12870.known	chr10	+	1798	11	FSM	ENSG00000171307.19	ENST00000370854.7	1798	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	135.091265446734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441102	True	NA	5	True	AATAAA	-18	NA	97446169	97457366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_12872.known	chr10	+	1718	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	106.321315935339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441134	True	NA	5	True	AATAAA	-18	NA	97446201	97457366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_12874.known	chr10	+	1280	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	161.450314591309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACATCCCTTTACTCA	97441129	True	NA	NA	False	AAGAAA	-24	NA	97446196	97457085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
transcript_12876.nnic	chr10	+	1022	5	NIC	ENSG00000171307.19	novel	1718	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	228.527350660703	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441135	True	NA	5	True	AATAAA	-18	NA	97446202	97457366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_97446354_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_12877.nic	chr10	-	3635	32	NIC	ENSG00000155229.21	novel	3532	32	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_29	98.1942584010615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489791	True	NA	-4	True	AATAAA	-16	NA	97498441	97458323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
transcript_12878.known	chr10	-	3499	31	FSM	ENSG00000155229.21	ENST00000438925.7	3499	31	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_24	50.5380934433511	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489772	True	NA	-4	True	AATAAA	-16	NA	97498422	97458323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_12884.known	chr10	-	3165	29	FSM	ENSG00000155229.21	ENST00000327238.14	3165	29	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	91.5575262457702	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	-97489734	True	NA	-6	True	AATAAA	-14	NA	97498384	97458325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_12888.known	chr10	-	3401	30	FSM	ENSG00000155229.21	ENST00000415383.5	3401	30	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_26	121.153394774552	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489738	True	NA	-4	True	AATAAA	-16	NA	97498388	97458323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477405_97477854_97477930_97478303_97478390_97480941_97481043_97498272
transcript_12889.known	chr10	-	2333	5	FSM	ENSG00000171160.18	ENST00000307450.11	2333	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	142.594486218788	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-97631117	True	NA	-7	True	AATAAA	-19	NA	97633500	97614554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97616412_97616677_97616788_97617207_97617323_97619586_97619684_97633346
transcript_12892.known	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	-97631108	True	NA	-22	True	AATAAA	-16	NA	97633491	97619409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97619684_97633346
transcript_12893.known	chr10	-	1375	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	4.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGTGAGTCTGTCAC	-97686167	True	NA	-1	True	AATAAA	-15	NA	97687241	97677423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97678026_97679618_97679916_97686765
transcript_12894.known	chr10	+	3213	2	FSM	ENSG00000155254.13	ENST00000285605.8	3213	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	97710038	True	NA	26	True	GATAAA	-21	NA	97713729	97718150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97715986_97717193
transcript_12895.nic	chr10	+	3027	12	NIC	ENSG00000155256.18	novel	3045	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	23.2215346052212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734197	True	NA	14	True	AATAAA	-16	NA	97737120	97760895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_12896.known	chr10	+	2997	12	FSM	ENSG00000155256.18	ENST00000359980.5	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	24.1370056411791	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734216	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_129.known	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3090.27210573762	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
transcript_12901.known	chr10	+	512	2	FSM	ENSG00000155256.18	ENST00000462887.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCAGCCCAGGAGAGGC	97734259	True	NA	NA	False	NA	NA	NA	97737182	97738845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97737326_97738476
transcript_12902.known	chr10	+	2927	11	FSM	ENSG00000155256.18	ENST00000337540.11	2927	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	32.5159960634762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97737322_97738476_97738650_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_12904.known	chr10	+	3393	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	41.2268640692893	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	98133082	True	NA	15	True	ATTAAA	-20	NA	98134656	98244897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_12907.nnic	chr10	+	3362	9	NIC	ENSG00000166024.14	novel	3393	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	28.0710593850677	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	98133055	True	NA	12	True	ATTAAA	-17	NA	98134629	98244894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_98134707_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_12909.nic	chr10	+	3245	8	NIC	ENSG00000166024.14	novel	3372	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	38.3570763500354	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	98133079	True	NA	12	True	ATTAAA	-17	NA	98134653	98244894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_98134707_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_12912.known	chr10	-	2023	16	FSM	ENSG00000119943.13	ENST00000370575.5	2023	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	4.59661711358352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGCTTGTATTTTTT	-98414678	True	NA	-3	True	ATTAAA	-19	NA	98415182	98383567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98383869_98384946_98385068_98387200_98387308_98388353_98388509_98390597_98390755_98391009_98391083_98392431_98392567_98392941_98393084_98395195_98395294_98395390_98395453_98397344_98397499_98400101_98400258_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_12918.nnic	chr10	-	1895	5	NNC	ENSG00000119943.13	novel	2865	15	NA	NA	-28	11521	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	7.25861557047899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCTTGTAAGTATAGAT	-98414706	True	NA	-36	True	AATAAA	-23	NA	98415210	98402426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98403932_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_12919.known	chr10	-	279	2	FSM	ENSG00000119943.13	ENST00000462874.1	279	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAGATACTCAACACTCA	-98414654	True	NA	NA	False	NA	NA	NA	98415158	98414166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98414296_98415008
transcript_12920.known	chr10	-	3703	20	FSM	ENSG00000107521.20	ENST00000361490.9	3703	20	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_19	73.8207757017478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAGAGATGCTCACA	-98443024	True	NA	1	True	AATAAA	-30	NA	98446935	98416197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445405_98446806
transcript_12931.known	chr10	-	1580	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	90.5989670995546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATGGTTGAGGTGTG	-98443002	True	NA	97	True	AATAAA	-16	NA	98446913	98429150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_12944.nic	chr10	-	1530	9	NIC	ENSG00000107521.20	novel	1580	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	88.9226313994362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTCAAAATGGTTGAG	NA	False	NA	92	True	AATAAA	-11	NA	98446967	98429155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_1295.known	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	3304	junction_8	298.350360314849	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964397	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
transcript_12951.nic	chr10	-	1424	9	NIC	ENSG00000107521.20	novel	1580	10	NA	NA	-32	-106	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	88.9226313994362	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAATAATCATCTAAT	NA	False	NA	-14	True	ATTAAA	-19	NA	98446967	98429261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_12969.known	chr10	-	922	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	96.8067949864861	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAAGGAATATATC	-98443016	True	NA	-29	True	NA	NA	NA	98446927	98442387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
transcript_12970.nnic	chr10	-	1354	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	-20	484	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	147.885841858584	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTAATTTTTGAT	-98443044	True	NA	-1	True	AATAAA	-19	NA	98446955	98441903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446886
transcript_12976.nnic	chr10	-	836	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	48	-133	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	157.014507468436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAACGTAAGCTGAACA	-98442903	True	NA	NA	False	NA	NA	NA	98446814	98442520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446646
transcript_12978.nnic	chr10	-	737	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	-20	-133	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	147.885841858584	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAACGTAAGCTGAACA	-98443044	True	NA	NA	False	NA	NA	NA	98446955	98442520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446886
transcript_12985.known	chr10	-	1978	9	FSM	ENSG00000120053.12	ENST00000370508.7	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_4	39.5719281814773	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTGATTTTATGAC	-99424683	True	NA	-10	True	AATAAA	-20	NA	99430624	99396869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99397687_99402579_99402723_99403468_99403635_99403723_99403875_99405755_99405861_99406136_99406250_99406725_99406850_99420623_99420806_99430447
transcript_12993.nnic	chr10	+	1163	4	NNC	ENSG00000224934.6	novel	1123	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	4.54606056566195	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	99430408	True	NA	-8	True	AATAAA	-1	NA	99430922	99438098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_99431204_99431929_99431949_99433545_99433941_99437630
transcript_12994.nic	chr10	+	1085	4	FSM	ENSG00000224934.6	ENST00000692010.1	1123	4	13	25	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	99430421	True	NA	-8	True	AATAAA	-1	NA	99430935	99438098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_99431266_99433545_99433632_99433739_99433941_99437630
transcript_13.known	ERCC-00040	+	728	1	FSM	ERCC-00040A	DQ883661	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00040_+_0_700
transcript_13000.known	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	9.98436277385793	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	99658361	True	NA	21	True	AATAAA	-33	NA	99659508	99711241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
transcript_13005.nnic	chr10	+	1314	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.3513336598961	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727655	True	NA	NA	False	AATAAA	-17	NA	99732198	99756134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_13008.known	chr10	+	1332	9	FSM	ENSG00000119929.13	ENST00000370476.10	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	39.4746754261514	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727690	True	NA	NA	False	AATAAA	-17	NA	99732233	99756134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_13011.known	chr10	-	2788	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	68.1431168570972	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATTTCCTTATAG	-99729142	True	NA	0	True	AATAAA	-20	NA	99732100	99711843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_13013.known	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	22.1697992773954	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-99729169	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_13023.nnic	chr10	-	1422	8	NIC	ENSG00000014919.13	novel	5030	9	NA	NA	4	335	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	75.5248303539968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTTGTGTCAGGTTTT	-99729165	True	NA	-1	True	AAGAAA	-22	NA	99732123	99714316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_99714719_99716347_99716462_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_13024.nic	chr10	-	1450	8	ISM	ENSG00000285932.1	ENST00000649102.1	1971	13	-11	64395	-11	-64395	5prime_fragment	FALSE	canonical	3	9	junction_5	83.8599415449258	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAGGTGACAGACTA	-99729165	True	NA	NA	False	TTTAAA	-15	NA	99732123	99715989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727072_99727440_99727564_99729552_99729735_99731959
transcript_13025.nic	chr10	-	1537	8	ISM	ENSG00000014919.13	ENST00000370483.9	2788	9	-27	4146	0	-1338	5prime_fragment	FALSE	canonical	3	207	junction_1	23.5311343907234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAGGTGACAGACTA	-99729169	True	NA	NA	False	TTTAAA	-15	NA	99732127	99715989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_13029.known	chr10	-	837	3	FSM	ENSG00000229278.3	ENST00000452391.2	837	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGGCAACTAA	-99659251	True	NA	NA	False	NA	NA	NA	99659284	99651594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99652211_99653824_99653906_99659144
transcript_13030.nnic	chr10	-	868	6	NNC	ENSG00000120054.12	novel	1855	9	NA	NA	138	-113	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1.62480768092719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTCTCCATCTGTTCC	-100065168	True	NA	NA	False	AATACA	-21	NA	100065256	100042305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065127
transcript_13031.known	chr10	-	1855	9	FSM	ENSG00000120054.12	ENST00000370418.8	1855	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.98431348329844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTTGGGAGGCCGAG	NA	False	NA	NA	False	NA	NA	NA	100081869	100042192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065187_100065371_100069713_100069870_100075910_100076108_100081402
transcript_13032.nic	chr10	-	3203	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_11	86.1240696431655	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	-100181329	True	NA	-3	True	AATAAA	-16	NA	100186011	100150093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_13033.known	chr10	-	1453	12	FSM	ENSG00000107566.14	ENST00000407654.7	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_11	61.9330483614269	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATCTGTTGAATAAT	-100181351	True	NA	-5	True	AATATA	-22	NA	100186033	100151807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
transcript_13034.nic	chr10	-	2859	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	18	-344	combination_of_known_junctions	FALSE	canonical	3	86	junction_11	86.1240696431655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTGCAGATGATTGT	-100181329	True	NA	NA	False	AATAAA	-17	NA	100186011	100150437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_13042.nic	chr10	-	2000	15	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	41.3639890706486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAGTGTCTTGTGTTCA	-100265498	True	NA	-4	True	AATGAA	-22	NA	100267670	100232298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_100232488_100233109_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_13047.known	chr10	-	2591	14	FSM	ENSG00000095485.18	ENST00000354105.10	2591	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	21.6125100743985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265466	True	NA	-3	True	AATGAA	-23	NA	100267638	100232297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_13055.known	chr10	-	2634	5	FSM	ENSG00000196072.12	ENST00000614731.4	2634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	278.457694273295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATCTTGTCTTTAT	-100277279	False	NA	NA	False	ATTAAA	-30	NA	100286378	100273279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286300
transcript_13056.known	chr10	-	2619	5	FSM	ENSG00000196072.12	ENST00000370372.7	2619	5	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	36.6264931436249	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTCACCTTAATATTT	-100277581	True	NA	NA	False	ATTAAA	-17	NA	100286680	100273292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
transcript_13061.known	chr10	+	5245	6	FSM	ENSG00000099194.6	ENST00000370355.3	5245	6	0	0	0	0	multi-exon	FALSE	canonical	3	3457	junction_3	221.495282116798	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGGTCTGGGAGTT	100288588	True	NA	27	True	AATAAA	-17	NA	100347232	100364826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100347532_100348063_100348347_100352365_100352497_100354426_100354633_100356531_100356765_100360733
transcript_13064.known	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	27.0102861065105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	100373523	False	NA	13	True	TTTAAA	-14	NA	100373565	100383372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
transcript_13065.known	chr10	+	1125	4	FSM	ENSG00000235823.4	ENST00000666045.1	1125	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	27.9404127862612	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373456	True	NA	19	True	AATAAA	-22	NA	100373567	100388360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388040
transcript_13069.known	chr10	+	992	3	FSM	ENSG00000235823.4	ENST00000661096.1	992	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373464	True	NA	19	True	AATAAA	-22	NA	100373575	100388360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374017_100381221_100381449_100388036
transcript_13070.known	chr10	+	12927	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	0	0	0	0	multi-exon	TRUE	canonical	3	513	junction_3	34.795026620927	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTCTCTTTGGAAAAT	100527488	True	NA	10	True	ATTAAA	-23	NA	100535942	100559998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
transcript_13078.known	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	1579.51535288518	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	-100529989	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
transcript_13082.known	chr10	-	678	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_1	411.526047170771	2617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-100502635	True	NA	-21	True	AATAAA	-17	NA	100529871	100523739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
transcript_13083.known	chr10	-	390	2	FSM	ENSG00000166136.16	ENST00000464651.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-100526587	False	NA	-21	True	AATAAA	-17	NA	100526598	100523739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100523930_100526398
transcript_13085.known	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	100911560	True	NA	NA	False	AATAAA	-19	NA	100912995	100913886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100913000_100913900
transcript_13089.known	chr10	-	894	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	244.263300559048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCCAGGCTCTGTG	-100976758	True	NA	-13	True	AGTAAA	-17	NA	100987515	100981376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_13090.known	chr10	-	727	6	FSM	ENSG00000055950.17	ENST00000448244.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	249.036061645698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-100976676	False	NA	-12	True	AGTAAA	-18	NA	100987433	100981375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100981544_100983754_100983818_100984033_100984075_100986748_100986976_100987089_100987197_100987312
transcript_13091.known	chr10	+	946	5	FSM	ENSG00000107815.10	ENST00000473656.5	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	54.4948392051945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCTGTGGTCCTGA	100980404	True	NA	NA	False	CATAAA	-15	NA	100987549	100993580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100987614_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_13093.known	chr10	+	3616	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	21.6679486800205	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCTTTTTCT	100980397	True	NA	14	True	ACTAAA	-17	NA	100987542	100994403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_13094.known	chr10	+	3665	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	46.7145587584856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	100980390	True	NA	12	True	ACTAAA	-15	NA	100987535	100994401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
transcript_13095.known	chr10	-	2134	5	FSM	ENSG00000055950.17	ENST00000318325.6	2134	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	253.610306375746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCTGAGTCTCTTCT	-100976740	True	NA	-6	True	AATAAA	-16	NA	100987497	100977820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100979373_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_13096.known	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	238.890142115576	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-100976737	True	NA	-12	True	AGTAAA	-18	NA	100987494	100981375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_13098.known	chr10	-	866	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	238.302795246347	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-100976726	True	NA	-40	True	AATAAA	-17	NA	100987483	100986273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
transcript_13099.known	chr10	-	798	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	240.655124376958	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTCAGGTCTGTCT	-100976726	True	NA	-46	True	AATAAA	-11	NA	100987483	100986279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
transcript_13100.known	chr10	-	1010	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	7	0	0	multi-exon	FALSE	canonical	3	514	junction_1	18.5	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986976_100987089_100987197_100987312
transcript_13102.known	chr10	-	810	2	FSM	ENSG00000055950.17	ENST00000487059.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTTTCCAGTGCCT	-100976756	True	NA	NA	False	AATGAA	-7	NA	100987513	100986587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100987197_100987312
transcript_13103.known	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986976_100987312
transcript_13104.known	chr10	-	897	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976529	False	NA	-42	True	AATAAA	-15	NA	100987286	100986275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986976_100987089
transcript_13105.known	chr10	+	2883	5	FSM	ENSG00000107816.17	ENST00000370223.7	2883	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	161.476778516293	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100994408	True	NA	NA	False	ATTAAA	-25	NA	100997071	101007836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100997235_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_13111.known	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	26.2180806906616	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	101351651	True	NA	15	True	ATTAAA	-6	NA	101354164	101557313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_13114.known	chr10	+	6084	14	FSM	ENSG00000166167.18	ENST00000393441.8	6084	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	44.215181199682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTCTTGTCTCCTTGCC	NA	False	NA	21	True	ATTAAA	-12	NA	101354032	101557319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101354229_101430344_101430453_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_13115.known	chr10	+	5982	14	FSM	ENSG00000166167.18	ENST00000408038.6	5982	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	27.3997365339555	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTTGTCTCCTTGCCCC	101351593	True	NA	23	True	ATTAAA	-14	NA	101354106	101557321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101354229_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_13129.known	chr10	+	641	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	242.784998621323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGACTGCAAGACCCA	101583266	True	NA	NA	False	ACTAAA	-26	NA	101588324	101609447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
transcript_13133.known	chr10	+	819	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_4	41.5855744219074	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	101583262	True	NA	32	True	AGTAAA	-24	NA	101588320	101609662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
transcript_13136.known	chr10	-	1953	6	FSM	ENSG00000166169.17	ENST00000628479.2	1953	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.1744814898679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTGGTGTCTGAGC	NA	False	NA	-7	True	AGTAAA	-16	NA	101588270	101578883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101587884
transcript_13137.known	chr10	-	784	6	FSM	ENSG00000166169.17	ENST00000429502.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	41.844473948181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCGAGTTTGCCTGTGC	-101586420	True	NA	NA	False	NA	NA	NA	101588232	101579695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101588203
transcript_13152.known	chr10	-	877	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	7.19444229944198	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTGGCTTCTTCC	-101765912	True	NA	-6	True	AATAAA	-20	NA	101783413	101781324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
transcript_13158.known	chr10	-	755	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	30.3016088681773	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGCTCTTGTGTGGC	-101765883	True	NA	-13	True	AATAAA	-13	NA	101783384	101781331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
transcript_13164.known	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	174.480562432228	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-101800977	True	NA	-7	True	AATAAA	-13	NA	101818444	101784449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_13170.known	chr10	-	3314	10	FSM	ENSG00000198408.14	ENST00000370094.7	3314	10	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_3	187.621960335138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	-101800951	True	NA	NA	False	NA	NA	NA	101818418	101797045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_13171.nic	chr10	-	1791	9	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-37	2247	10	-2247	5prime_fragment	FALSE	canonical	3	489	junction_2	180.925355810069	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAAAAGAAACAGC	-101800988	True	NA	0	True	NA	NA	NA	101818455	101799292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_13172.known	chr10	-	2089	8	FSM	ENSG00000120049.20	ENST00000348850.9	2089	8	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_5	6.06428150765461	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-101839590	True	NA	-3	True	AATAAA	-17	NA	101839872	101825973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_13178.known	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_4	23.2804123674818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-102053398	True	NA	0	True	ATTAAA	-23	NA	102056173	101845598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_13184.known	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	6.04152298679729	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-102053418	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_13193.known	chr10	+	2441	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	204.493276173081	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	102127047	True	NA	4	True	ATTAAA	-15	NA	102152403	102162600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13197.known	chr10	+	3967	13	FSM	ENSG00000166197.17	ENST00000405356.5	3967	13	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	340.798195010218	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGTTTTATTATTGT	NA	False	NA	16	True	AATAAA	-21	NA	102152175	102163871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13202.known	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_2	207.306067338984	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127032	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13206.known	chr10	+	3727	13	FSM	ENSG00000166197.17	ENST00000370007.5	3727	13	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	340.798195010218	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127058	True	NA	15	True	AATAAA	-20	NA	102152414	102163870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13213.nic	chr10	+	1897	11	ISM	ENSG00000166197.17	ENST00000488254.6	2441	13	-47	946	-32	-945	5prime_fragment	FALSE	canonical	3	740	junction_2	220.427062766803	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	102127000	True	NA	NA	False	GATAAA	-30	NA	102152356	102161654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_13215.nic	chr10	+	1955	11	ISM	ENSG00000166197.17	ENST00000605788.6	3723	13	-93	2216	-93	-945	5prime_fragment	FALSE	canonical	3	726	junction_2	223.570145591937	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	102152278	True	NA	NA	False	GATAAA	-30	NA	102152295	102161654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_13226.known	chr10	+	3217	9	FSM	ENSG00000166197.17	ENST00000603946.5	3217	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	412.130269908678	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	102127047	True	NA	11	True	AATAAA	-16	NA	102152403	102163866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13234.known	chr10	+	1400	4	FSM	ENSG00000119915.5	ENST00000370005.4	1400	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGTTGGGGGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	102226298	102229589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102226650_102227625_102227758_102228416_102228569_102228824
transcript_1324.known	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_4	43.7539502589801	1226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-17044069	True	NA	NA	False	AATAAA	-31	NA	17054032	17018721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
transcript_13243.known	chr10	-	1100	9	FSM	ENSG00000107874.11	ENST00000369937.5	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	45.868698477284	849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGTGCATTCTGGTC	-102423894	True	NA	-11	True	AGTAAA	-15	NA	102432574	102423248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102423573_102423656_102423718_102423797_102423860_102423995_102424179_102424263_102424395_102424498_102424561_102424648_102424793_102425114_102425199_102432525
transcript_13257.known	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	65.3031392813546	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	102449004	True	NA	-19	True	NA	NA	NA	102449869	102456267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
transcript_13258.nnic	chr10	+	1448	4	NIC	ENSG00000269609.6	novel	1483	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	67.9264307909668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	102448971	True	NA	11	True	AATAAA	-24	NA	102449836	102456297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_102450023_102450186_102450331_102451398_102451556_102455336
transcript_13260.nnic	chr10	+	1385	4	NIC	ENSG00000269609.6	novel	1556	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	69.3124968690511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	102448971	True	NA	7	True	AATAAA	-20	NA	102449836	102456293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_102450023_102450186_102450331_102452089_102452188_102455336
transcript_13261.known	chr10	+	1312	3	FSM	ENSG00000269609.6	ENST00000473970.3	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	29.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	11	True	AATAAA	-24	NA	102449815	102456297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102450023_102450186_102450331_102455336
transcript_13262.known	chr10	+	1178	3	FSM	ENSG00000269609.6	ENST00000669625.1	1178	3	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_2	85.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	102449114	False	NA	11	True	AATAAA	-24	NA	102449979	102456297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102450023_102450186_102450361_102455336
transcript_13265.known	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_5	38.6735051424098	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	-102485824	True	NA	-9	True	AATAAA	-22	NA	102502712	102479228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_13286.known	chr10	-	3834	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_5	104.062673423279	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTGGAATGTGTTGT	-102699532	True	NA	-10	True	AATAAA	-17	NA	102714397	102673730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
transcript_13292.known	chr10	+	6770	12	FSM	ENSG00000156398.13	ENST00000369893.10	6770	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.87190841846882	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTCTTCAGGAGC	102713438	True	NA	NA	False	ATTAAA	-18	NA	102714635	102743492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_13299.nnic	chr10	+	1752	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	22.596091107387	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	102867703	True	NA	11	True	AATAAA	-21	NA	102869505	102901899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901460
transcript_133.known	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_3	3229.99755761862	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
transcript_13300.known	chr10	+	1723	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	46	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	22.596091107387	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACATCTTTGAATCAAG	102867713	True	NA	6	True	AATAAA	-16	NA	102869515	102901894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901474
transcript_13303.nnic	chr10	+	1646	11	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	-23	-791	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	11.0923396990896	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102869446	102901108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_102869558_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_13306.known	chr10	+	2450	11	FSM	ENSG00000214435.9	ENST00000369880.8	2450	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	9.68297474952816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	102867667	True	NA	11	True	AATAAA	-21	NA	102869469	102901899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_13310.nnic	chr10	+	1562	9	NIC	ENSG00000214435.9	novel	2450	11	NA	NA	180	-791	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	19.3503875930174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGAAAAAGAA	102867847	False	NA	NA	False	NA	NA	NA	102869649	102901108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_102869846_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_13312.known	chr10	+	838	6	FSM	ENSG00000166275.16	ENST00000369883.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	19.3142434488126	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTCATATTGTTATTG	102853650	True	NA	NA	False	AATAAA	-23	NA	102854261	102864213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872_102862933_102863729
transcript_13316.known	chr10	+	2386	5	FSM	ENSG00000166275.16	ENST00000339834.10	2386	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	2.34520787991171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAGGGATAGAGTGGAA	102853647	True	NA	NA	False	AAGAAA	-22	NA	102854258	102864961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872
transcript_13328.nic	chr10	-	3318	19	NIC	ENSG00000076685.19	novel	3614	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_13	85.4249544308112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	-103185703	True	NA	-24	True	AATAAA	-7	NA	103193311	103088163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_13329.known	chr10	-	3525	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_17	76.4417998573562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	-103185664	True	NA	-32	True	AATAAA	-15	NA	103193272	103088037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
transcript_13330.nnic	chr10	-	3399	19	NNC	ENSG00000076685.19	novel	3192	20	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_18	71.4727997990222	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	-103185710	True	NA	-24	True	AATAAA	-7	NA	103193318	103088163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
transcript_13336.known	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_17	44.8160407516161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	-103185698	True	NA	-12	True	AATAAA	-35	NA	103193306	103088017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_1334.known	chr1	+	3189	16	FSM	ENSG00000142619.4	ENST00000375460.3	3189	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.21710521977545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	17248866	True	NA	28	True	AATAAA	-17	NA	17249097	17284233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_17249230_17259577_17259759_17262132_17262206_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
transcript_13346.nnic	chr10	-	1473	4	NNC	ENSG00000076685.19	novel	4688	20	NA	NA	-12	27236	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	28.6123516451666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTTGCTTGGTTAT	-103185710	True	NA	-1	True	AATAAA	-22	NA	103193318	103142047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_103143169_103174857_103174983_103181184_103181329_103193235
transcript_13348.nic	chr10	-	518	4	NIC	ENSG00000076685.19	novel	427	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	31.5841028929991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	-103185710	True	NA	-1	True	AATAAA	-41	NA	103193318	103169283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_103169450_103174857_103174983_103181184_103181329_103193235
transcript_1335.known	chr1	+	1841	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	17755194	True	NA	19	True	AATAAA	-19	NA	17755332	17827063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_17755505_17822984_17823357_17825766
transcript_13350.nic	chr10	-	367	3	NIC	ENSG00000076685.19	novel	427	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	77.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	-103185703	True	NA	-1	True	AATAAA	-41	NA	103193311	103169283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_103169450_103174857_103174983_103193235
transcript_13351.known	chr10	-	3360	21	FSM	ENSG00000076685.19	ENST00000675811.1	3360	21	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	123.14560487488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAATAAAGTGTAATAT	-103185660	True	NA	-41	True	NA	NA	NA	103193268	103088180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098047_103098089_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103111744_103111806_103139405_103139480_103174857_103174983_103193235
transcript_13352.known	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	15.9358281016065	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348232	True	NA	-2	True	AATAAA	-17	NA	103351140	103302795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_13353.known	chr10	-	1868	10	FSM	ENSG00000156374.16	ENST00000490296.1	1868	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.0704275390326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAGAAGTTTACAGAA	-103348173	True	NA	NA	False	AATAAA	-13	NA	103351081	103303126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347320_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_13358.known	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.0245668464001	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348171	True	NA	-2	True	AATAAA	-17	NA	103351079	103302795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
transcript_1336.nnic	chr1	+	1844	3	NNC	ENSG00000117148.8	novel	1670	2	NA	NA	3979	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	17759256	True	NA	19	True	AATAAA	-19	NA	17759311	17827063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_17759487_17822984_17823357_17825766
transcript_13362.known	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	2984.60393352284	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	-103360144	True	NA	8	True	AATAAA	-26	NA	103396492	103389040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
transcript_13364.known	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	3057.57007278656	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
transcript_13366.known	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	2940.53677072741	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360127	True	NA	-1	True	AATAAA	-17	NA	103396475	103389049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
transcript_13371.known	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5118	junction_3	577.987504670781	3528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
transcript_13373.known	chr10	+	6477	36	FSM	ENSG00000148843.15	ENST00000369797.8	6477	36	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_12	38.7657959904799	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTGTCCTGAGAGC	103389272	True	NA	16	True	ATTAAA	-17	NA	103396625	103446294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442212_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
transcript_13379.nic	chr10	+	296	3	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	2	45805	2	-4599	5prime_fragment	FALSE	canonical	3	290	junction_2	30	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAAGCAGCAAGTCCG	103389274	True	NA	NA	False	AAAAAG	-45	NA	103396627	103400476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_103396731_103398415_103398529_103400396
transcript_13380.known	chr10	-	1843	4	FSM	ENSG00000138172.11	ENST00000369788.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	-103452287	True	NA	NA	False	GATAAA	-20	NA	103452402	103446785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103447569_103449386_103450100_103451082_103451183_103452155
transcript_13381.known	chr10	-	1914	4	FSM	ENSG00000138172.11	ENST00000260743.10	1914	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	-103452255	True	NA	NA	False	GATAAA	-20	NA	103452370	103446785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103447569_103449386_103450100_103451082_103451286_103452155
transcript_13382.known	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	66.7997005981314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	-103915982	True	NA	-11	True	AATAAA	-13	NA	103918130	103882554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_13385.known	chr10	-	6369	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_9	24.2766971536772	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGCAAAAGGTTCTGTG	-103916036	True	NA	-7	True	AATAAA	-20	NA	103918184	103877568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_13390.known	chr10	-	1311	9	FSM	ENSG00000107960.11	ENST00000369764.1	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8671311351319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	-103917653	False	NA	-11	True	AATAAA	-13	NA	103917669	103882554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461
transcript_13391.known	chr10	+	7827	19	FSM	ENSG00000065613.15	ENST00000369755.4	7827	19	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	17.3501520966756	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGAAGCAGTCTTTTA	103965012	True	NA	10	True	AATAAA	-17	NA	103967139	104029233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_103967896_103990674_103990840_103992597_103992647_103992983_103993134_103998898_103998972_103999118_103999314_103999866_103999949_104001443_104001573_104002171_104003528_104005560_104005692_104005911_104006036_104008176_104008357_104010815_104010909_104018159_104018290_104018783_104018909_104019733_104019923_104020487_104020614_104021619_104021734_104025573
transcript_13394.known	chr10	+	1503	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	62.5264388523411	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	104122013	False	NA	11	True	ATTAAA	-21	NA	104122057	104126385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
transcript_13396.known	chr10	+	1430	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	34.7658836600865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	104121098	True	NA	9	True	ATTAAA	-19	NA	104122170	104126383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
transcript_134.known	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3561.98599410809	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
transcript_13412.known	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	423.71811384457	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104253255	True	NA	32	True	AATAAA	-32	NA	104254193	104267459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_13414.known	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	105.281717311222	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	104244589	True	NA	28	True	AATAAA	-28	NA	104254891	104267455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_13419.known	chr10	+	900	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	459.908143002491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104254677	False	NA	32	True	AATAAA	-32	NA	104254709	104267459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
transcript_13422.known	chr10	+	6715	7	FSM	ENSG00000065621.15	ENST00000338595.7	6715	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.5856439498503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATCTCGCTACTCTG	104269096	True	NA	28	True	AATAAA	-28	NA	104269183	104304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_13424.nic	chr10	+	791	5	NIC	ENSG00000065621.15	novel	6715	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	38.1903129078566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGATAATCATTTGT	104274368	True	NA	18	True	AATAAA	-19	NA	104274881	104299418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_104274950_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_13425.known	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	21.9829479369806	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	104274968	True	NA	23	True	AATAAA	-23	NA	104275161	104304945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_13428.nic	chr10	+	1103	3	ISM	ENSG00000065621.15	ENST00000477078.2	763	7	-38	11463	-16	-11463	5prime_fragment	FALSE	canonical	3	35	junction_1	32.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCCAGAGGTA	104274368	True	NA	NA	False	NA	NA	NA	104274881	104280181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_104274950_104277893_104278117_104279369
transcript_13430.known	chr10	-	795	2	FSM	ENSG00000231233.2	ENST00000435434.2	1134	2	49	290	49	-290	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAACAATCCATTCTTT	-104353431	True	NA	NA	False	NA	NA	NA	104353575	104351590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_104351928_104353117
transcript_13436.known	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_13	34.8519726844837	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920396	True	NA	-6	True	AATAAA	-16	NA	109923511	109864765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_13440.nic	chr10	-	2450	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_19	69.1560121509367	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920438	True	NA	-6	True	AATAAA	-16	NA	109923553	109864765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
transcript_13443.known	chr10	-	2467	20	FSM	ENSG00000108039.18	ENST00000322238.12	2467	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	67.930182505944	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920438	True	NA	-6	True	AATAAA	-16	NA	109923553	109864765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_13445.known	chr10	-	2344	19	FSM	ENSG00000108039.18	ENST00000369683.5	2344	19	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_17	93.0950828156055	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920396	True	NA	-6	True	AATAAA	-16	NA	109923511	109864765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109907690_109907816_109923401
transcript_13456.known	chr10	+	4413	15	FSM	ENSG00000148700.15	ENST00000356080.9	4413	15	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	51.295661590033	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	110003584	True	NA	NA	False	AATAAA	-17	NA	110007983	110135565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304_110132401_110133325
transcript_13462.known	chr10	+	2424	6	FSM	ENSG00000119950.21	ENST00000239007.11	2424	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	31.2627573959816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATGATTTTCATAACT	110225724	True	NA	-54	True	TTTAAA	-39	NA	110225992	110286506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110226284_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_13464.known	chr10	+	2255	6	FSM	ENSG00000119950.21	ENST00000650843.1	2255	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.2231419496547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAGAAAATAAAGAC	110227004	True	NA	-21	True	NA	NA	NA	110227086	110286596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110227119_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_13469.known	chr10	+	889	5	FSM	ENSG00000119950.21	ENST00000393134.5	889	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	41.8001196170537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAACAAAACAAAACTAT	110225815	False	NA	NA	False	TTTAAA	-6	NA	110226083	110285092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110226284_110228188_110228322_110279179_110279295_110279913_110280086_110284823
transcript_1347.nnic	chr1	-	667	4	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	2.94392028877595	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCGAGACTGAGGGTTT	-18298057	True	NA	0	True	AGTAAA	-19	NA	18298346	18289107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr1_-_18289531_18291738_18291800_18295686_18295763_18298239
transcript_13470.known	chr10	+	2303	6	FSM	ENSG00000119950.21	ENST00000650810.1	2303	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAACCATATTTAGC	110227222	True	NA	-8	True	AAAAAG	-5	NA	110227339	110286609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110227407_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_13478.known	chr10	-	4310	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	21.5925913220252	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATTCAATAAATATCA	-110296799	True	NA	NA	False	ATTAAA	-28	NA	110304920	110290729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
transcript_13486.known	chr10	+	5522	29	FSM	ENSG00000108055.11	ENST00000361804.5	5522	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	765	junction_19	91.4730569788789	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAGCCTATATT	110556882	True	NA	NA	False	AATAAA	-23	NA	110567694	110606048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397_110596551_110598138_110598291_110599653_110599813_110600438_110600547_110601021_110601131_110601636_110601885_110601965_110602179_110602473_110602666_110602824_110603003_110603183_110603291_110604230
transcript_13488.nic	chr10	+	2372	19	ISM	ENSG00000108055.11	ENST00000361804.5	5522	29	-17	9381	-6	-116	5prime_fragment	FALSE	canonical	3	793	junction_14	80.9658707247827	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTATGTTTGTTTAGCT	110556865	True	NA	9	True	ATTAAA	-24	NA	110567677	110596667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397
transcript_1349.known	chr1	-	3139	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	21.6257593944757	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18899444	True	NA	-5	True	AATAAA	-16	NA	18902555	18871429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_13492.nic	chr10	+	1518	14	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	2521	-6	-1408	5prime_fragment	FALSE	canonical	3	868	junction_4	69.9677017626049	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGATGAACTACAAA	110556865	True	NA	NA	False	AGTAAA	-4	NA	110567677	110589678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604
transcript_13493.nic	chr10	+	1303	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	7944	-6	2249	5prime_fragment	FALSE	canonical	3	868	junction_4	63.0070542787781	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGGGATAAGTGGAT	110556865	True	NA	NA	False	NA	NA	NA	110567677	110584255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_13494.nic	chr10	+	1416	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	7831	-6	2362	5prime_fragment	FALSE	canonical	3	868	junction_4	63.0070542787781	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAAAAATCTGGAGC	110556865	True	NA	NA	False	NA	NA	NA	110567677	110584368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_13495.nic	chr10	+	1204	12	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	8263	-6	1930	5prime_fragment	FALSE	canonical	3	868	junction_4	61.7405930198786	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACGAGGAAT	110556865	True	NA	19	True	NA	NA	NA	110567677	110583936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840
transcript_13497.nic	chr10	+	994	11	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	8765	-6	1428	5prime_fragment	FALSE	canonical	3	868	junction_4	61.5025202735628	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAACAGCTTAG	110556865	True	NA	30	True	AAAACA	-19	NA	110567677	110583434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383
transcript_13499.nic	chr10	+	770	9	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	10193	-6	0	5prime_fragment	FALSE	canonical	3	868	junction_4	65.9730058432993	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTATCAGAAGTGGGAT	110556865	True	NA	NA	False	AAGAAA	-13	NA	110567677	110582006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922
transcript_1350.known	chr1	-	2957	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	46.5659804207361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGGTGGATGGTC	-18899417	True	NA	-7	True	AATAAA	-14	NA	18902528	18871431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_13500.nic	chr10	+	686	8	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-6	11178	-6	-985	5prime_fragment	FALSE	canonical	3	868	junction_4	70.2758413507161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATAAATGTGATTCTG	110556865	True	NA	41	True	AAGAAA	-25	NA	110567677	110581021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903
transcript_13502.known	chr10	+	3697	13	FSM	ENSG00000150593.18	ENST00000393104.6	3697	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.3438128953058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGTTGTATTTAAT	110871771	True	NA	NA	False	AATAAA	-19	NA	110871794	110900005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110872019_110875965_110876071_110876669_110876754_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_13505.known	chr10	+	3481	12	FSM	ENSG00000150593.18	ENST00000280154.12	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	17.5983658144398	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGTTGTATTTAATC	110868253	True	NA	NA	False	AATAAA	-20	NA	110871927	110900006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_13509.nic	chr10	+	2319	12	NIC	ENSG00000150593.18	novel	3481	12	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	38.4284243972205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACATGTGAAGCAGT	NA	False	NA	-6	True	AATGAA	-27	NA	110871759	110898718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_13514.known	chr10	-	812	5	FSM	ENSG00000214413.9	ENST00000454061.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	44.5224662389675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGCAAATTAAATTAT	-110918013	True	NA	-32	True	NA	NA	NA	110919201	110900120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110918120_110918214_110919120
transcript_13515.known	chr10	-	616	5	FSM	ENSG00000214413.9	ENST00000398289.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	42.9090608147044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATATCCAAGATT	-110917994	True	NA	-24	True	AATAAA	-20	NA	110919182	110900237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901025_110901123_110901537_110901613_110918120_110918214_110919120
transcript_13516.known	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-110917992	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
transcript_1352.known	chr1	-	2124	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	45.1750176781617	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18899442	True	NA	-5	True	AATAAA	-16	NA	18902553	18871429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_13521.known	chr10	-	492	3	FSM	ENSG00000214413.9	ENST00000423273.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	48.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTATGAACCAAGTT	-110917969	True	NA	49	True	CATAAA	-3	NA	110919157	110900164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110918120_110918214_110919120
transcript_13524.known	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	45.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	-110918013	True	NA	-66	True	ATTAAA	-24	NA	110919201	110899955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110919120
transcript_13525.known	chr10	-	296	2	FSM	ENSG00000214413.9	ENST00000431847.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCTGTATCTGATTCT	-110917973	True	NA	NA	False	NA	NA	NA	110919161	110917958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110918214_110919120
transcript_13527.known	chr10	-	383	3	FSM	ENSG00000214413.9	ENST00000436562.1	383	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAAGATTGATGAAATT	-110917969	True	NA	-15	True	AATAAA	-29	NA	110919157	110900228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901586_110919120
transcript_13528.known	chr10	+	3884	9	FSM	ENSG00000108061.13	ENST00000369452.9	3884	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	18.9039513065391	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	110915649	True	NA	14	True	TATAAA	-29	NA	110919603	111013665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110964124_110965062_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_13529.nnic	chr10	+	2958	8	FSM	ENSG00000108061.13	ENST00000689997.1	3581	8	18	605	0	0	multi-exon	TRUE	canonical	3	18	junction_1	54.3413248995342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	110915638	True	NA	14	True	TATAAA	-29	NA	110919592	111013665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_13531.nic	chr10	+	430	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-15	5713	-3	-248	multi-exon	FALSE	canonical	3	134	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTAAGACCAAAGGGAA	110915630	True	NA	NA	False	AAGAAA	-3	NA	110919584	110964481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110964124
transcript_13532.known	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	12.437599348388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	112445063	True	NA	15	True	ATTAAA	-18	NA	112447214	112818744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
transcript_13533.known	chr10	+	853	5	FSM	ENSG00000151532.14	ENST00000496445.5	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	4.47213595499958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCAATCTCCAGTTTGCT	112445112	True	NA	NA	False	NA	NA	NA	112447263	112538646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245
transcript_13535.nnic	chr10	+	1608	3	NNC	ENSG00000151532.14	novel	2423	3	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	112446902	False	NA	8	True	AATAAA	-18	NA	112447056	112450726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_112447468_112448881_112449500_112450147
transcript_1354.known	chr1	-	5408	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_14	65.8121544201486	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	-19245632	True	NA	NA	False	NA	NA	NA	19251509	19216873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_13542.known	chr10	-	2297	12	FSM	ENSG00000023041.12	ENST00000682055.1	2297	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	94.0339309254338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443532	True	NA	-18	True	AATAAA	-18	NA	112446962	112430304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112441728_112441813_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13543.known	chr10	-	1721	11	FSM	ENSG00000023041.12	ENST00000369404.3	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	70.1541873304794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	-112443471	True	NA	-5	True	ACTAAA	-15	NA	112446901	112430723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443595_112445169_112445651_112446704
transcript_13545.known	chr10	-	2170	11	FSM	ENSG00000023041.12	ENST00000369405.7	2170	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	37.2268720147154	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-112443484	True	NA	-13	True	AATAAA	-23	NA	112446914	112430299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13546.known	chr10	-	2145	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	71.3164777593509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443526	True	NA	-18	True	AATAAA	-18	NA	112446956	112430304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
transcript_13553.known	chr10	-	3216	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	36.5557244170365	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443520	True	NA	-18	True	AATAAA	-18	NA	112446950	112430304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13559.known	chr10	-	2121	11	FSM	ENSG00000023041.12	ENST00000684173.1	2121	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	75.9276629430934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443532	True	NA	-18	True	AATAAA	-18	NA	112446962	112430304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
transcript_13560.known	chr10	-	2038	10	FSM	ENSG00000023041.12	ENST00000682195.1	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	79.4215196138791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443519	True	NA	-18	True	AATAAA	-18	NA	112446949	112430304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13562.known	chr10	+	4000	14	FSM	ENSG00000148737.17	ENST00000538897.5	4000	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	54.6062830986156	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938856	True	NA	13	True	AATAAA	-25	NA	112950249	113167678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_13566.known	chr10	+	1979	13	FSM	ENSG00000148737.17	ENST00000355717.9	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	53.1310617456702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	112950572	False	NA	NA	False	NA	NA	NA	112950585	113165972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_13568.known	chr10	+	3953	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	45.4039737614819	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938856	True	NA	13	True	AATAAA	-25	NA	112950249	113167678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
transcript_13572.known	chr10	+	2467	7	FSM	ENSG00000165806.21	ENST00000621345.4	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	8.19891591749923	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	113679052	True	NA	17	True	ATTAAA	-25	NA	113679161	113730907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_113679350_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_13573.known	chr10	+	2620	7	FSM	ENSG00000165806.21	ENST00000369321.6	2620	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.68962790249909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	113679658	False	NA	17	True	ATTAAA	-25	NA	113679668	113730907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_113679979_113697493_113697604_113721000_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_13575.known	chr10	+	2344	7	FSM	ENSG00000165806.21	ENST00000369318.8	2344	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.02305952453618	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCAGTTTGCTTTCCT	113679636	True	NA	15	True	ATTAAA	-23	NA	113679911	113730905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_113679979_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_13577.known	chr10	-	4241	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_9	16.6095316974885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	-113854072	True	NA	NA	False	AATAAA	-13	NA	113854383	113834728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
transcript_13579.known	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	14.7604570982744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-114171271	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
transcript_13584.known	chr10	-	2035	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-114171241	True	NA	-5	True	AATAAA	-22	NA	114174202	114161607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114163330_114173140_114173266_114174014
transcript_13585.known	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-114171259	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114163330_114174014
transcript_13586.known	chr10	-	7228	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	10.1971673626661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTTTGATGGCATCT	-114171242	True	NA	-5	True	ATTAAA	-22	NA	114174203	114120861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_1359.known	chr1	+	507	2	FSM	ENSG00000230424.2	ENST00000437898.2	653	2	146	0	140	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAATCAGCACTTCTT	19209836	True	NA	NA	False	AATATA	-25	NA	19210500	19240704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19210560_19240256
transcript_13592.known	chr10	-	2255	16	FSM	ENSG00000099204.21	ENST00000369253.6	2255	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.7492023179259	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-114519268	True	NA	NA	False	AAGAAA	-14	NA	114526835	114435440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114487957_114488017_114491790_114491879_114526659
transcript_13595.known	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_7	21.2861936667016	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	114934188	True	NA	11	True	AATAAA	-20	NA	114938194	114977676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
transcript_13597.known	chr10	+	584	4	FSM	ENSG00000165832.6	ENST00000485065.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	16.739839372653	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCCTCTTTTTCTATA	114934379	False	NA	-1	True	AATAAA	-10	NA	114938385	114960000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725
transcript_1360.nnic	chr1	+	262	2	FSM	ENSG00000230424.2	ENST00000690421.1	296	2	34	0	34	0	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTAGTTCTTATTTT	19209730	True	NA	14	True	AATAAA	-20	NA	19210394	19213718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19210560_19213621
transcript_13600.known	chr10	-	1755	10	FSM	ENSG00000151892.16	ENST00000684105.1	1755	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	5.49747416749021	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTATCTGTTTCCTGT	-116272624	False	NA	NA	False	ATTAAA	-34	NA	116272643	116064354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272560
transcript_13601.nnic	chr10	+	1425	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	14.6363322667334	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116324946	True	NA	24	True	ATTAAA	-21	NA	116325460	116380029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_116325603_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_13602.nnic	chr10	+	1389	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	16.1288216832132	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116324946	True	NA	24	True	ATTAAA	-21	NA	116325460	116380029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_116325603_116340769_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_13603.nnic	chr10	+	1308	6	NNC	ENSG00000182645.6	novel	1679	9	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.11055553385247	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116324946	True	NA	24	True	ATTAAA	-21	NA	116325460	116380029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_116325603_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_13604.nnic	chr10	+	457	3	NNC	ENSG00000182645.6	novel	313	2	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	11	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGAAAATAACTTATTT	116324946	True	NA	NA	False	AATAAA	-22	NA	116325460	116342233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_116325603_116340733_116340851_116342035
transcript_13605.known	chr10	-	4894	4	FSM	ENSG00000165868.16	ENST00000453491.3	4894	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTTTGTGTGTCCTT	-116849391	True	NA	-3	True	CATAAA	-43	NA	116849701	116828763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116833374_116834934_116835023_116835197_116835258_116849565
transcript_13607.known	chr10	-	525	3	FSM	ENSG00000165868.16	ENST00000674326.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTTTGTTTTATGAAA	-116849410	True	NA	NA	False	AAAAAG	-14	NA	116849720	116833091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116833374_116834934_116835023_116849565
transcript_13608.nnic	chr10	-	1457	7	NNC	ENSG00000165863.17	novel	966	6	NA	NA	-48	1485	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	27.2274371422162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	-116668160	True	NA	-26	True	AATAAA	-20	NA	116670312	116662210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_116662698_116663883_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_1361.nnic	chr1	+	1245	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-259	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	170.393478455016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGGCCCTCTTTTTTC	NA	False	NA	21	True	AGTAAA	-15	NA	19251545	19260126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258963_19260023
transcript_13611.nic	chr10	-	1158	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116668160	True	NA	-4	True	AATAAA	-18	NA	116670312	116663695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_13612.known	chr10	-	966	6	FSM	ENSG00000165863.17	ENST00000588184.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	27.0451474390509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116667814	False	NA	-4	True	AATAAA	-18	NA	116669966	116663695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116669926
transcript_13613.nic	chr10	-	1068	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	-116668160	True	NA	-1	True	AATAAA	-31	NA	116670312	116663785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_13619.known	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	-116668112	True	NA	60	True	AATAAA	-23	NA	116670264	116664285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116665827_116668257_116668324_116670080
transcript_1362.nnic	chr1	+	1179	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-196	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.393478455016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGGCCCTCTTTTTTC	19250809	False	NA	21	True	AGTAAA	-15	NA	19251608	19260126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258978_19260041
transcript_13620.known	chr10	+	827	3	FSM	ENSG00000232767.2	ENST00000433600.2	827	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTGTAGAATATGG	116670050	False	NA	17	True	CATAAA	-29	NA	116670064	116672750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_116670279_116670418_116670486_116672204
transcript_13621.known	chr10	-	6871	17	FSM	ENSG00000187164.20	ENST00000355371.9	6871	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	10.9457112034806	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAGTTTTTATATAC	-117003706	True	NA	2	True	AATAAA	-19	NA	117005187	116881476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116886567_116901764_116901958_116906626_116906748_116911789_116911844_116915374_116915485_116921433_116921517_116927791_116927892_116929848_116930003_116940465_116940613_116944923_116945019_116948915_116948998_116951908_116952007_116954041_116954211_116960135_116960231_116968651_116968713_116979255_116979309_117005021
transcript_13622.nic	chr10	+	1065	6	ISM	ENSG00000188316.15	ENST00000341276.11	2878	14	2	21348	2	-21274	5prime_fragment	FALSE	canonical	0	0	junction_4	1.89736659610103	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTCCGTCATTGATGAA	116849426	True	NA	NA	False	AATATA	-13	NA	116849500	116861253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_116849732_116855622_116855752_116856491_116856683_116858989_116859139_116860793_116860964_116861058
transcript_13623.known	chr10	+	3931	4	FSM	ENSG00000177640.16	ENST00000454857.6	3931	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.2659863237109	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACTGTTAGTTCATT	118046908	True	NA	NA	False	AATAAA	-30	NA	118046981	118210158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118206521
transcript_13627.nnic	chr10	-	1286	10	NNC	ENSG00000165669.14	novel	13898	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	124.263161610082	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTCAGTCTTTCTTT	-118337969	True	NA	1	True	CATAAA	-21	NA	118342328	118310719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118337229_118337409_118341726_118341928_118342269
transcript_13628.known	chr10	-	13898	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	50.0010937380374	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATTATTACTTTATTG	-118337965	True	NA	NA	False	AATAAA	-21	NA	118342324	118297924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
transcript_13632.known	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	91.9145565962526	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-118337961	True	NA	-25	True	ACTAAA	-12	NA	118342320	118310745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_13639.known	chr10	-	11035	9	FSM	ENSG00000151893.15	ENST00000369151.8	11035	9	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_2	11.5298525576002	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGTTTTTGCTGAAT	-118748041	True	NA	-2	True	AATAAA	-22	NA	118754970	118676410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_118686169_118686597_118686642_118691264_118691404_118695140_118695231_118701305_118701409_118707491_118707588_118729294_118729398_118730283_118730411_118754395
transcript_13640.known	chr10	-	4495	23	FSM	ENSG00000107581.13	ENST00000541549.2	4495	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	223.008875782301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAACTAAAA	-119067710	True	NA	NA	False	NA	NA	NA	119080823	119035792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119035984_119036030_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13641.known	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_18	157.042449884608	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-119067704	True	NA	-9	True	AATAAA	-18	NA	119080817	119033669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13643.nic	chr10	-	2624	16	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-47	14771	-47	6312	5prime_fragment	FALSE	canonical	3	613	junction_12	46.9281247109757	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGCAGAGAAG	-119067757	True	NA	12	True	NA	NA	NA	119080870	119050563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13645.nic	chr10	-	2085	12	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-47	22249	-47	-1166	5prime_fragment	FALSE	canonical	3	613	junction_8	44.7810098476487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGAAAACTGTCCGA	-119067757	True	NA	NA	False	NA	NA	NA	119080870	119058041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_1366.known	chr1	+	2049	8	FSM	ENSG00000053372.5	ENST00000330263.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	30.9825494003792	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	19246091	True	NA	23	True	AGTAAA	-17	NA	19251804	19260128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_13672.known	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	59.9998697915254	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	119098491	True	NA	26	True	AATAAA	-23	NA	119104112	119137984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13686.nic	chr10	+	1700	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-7	9	intron_retention	TRUE	canonical	3	139	junction_1	82.6089243060337	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGGTTTTTCCCGGCC	119098457	True	NA	NA	False	NA	NA	NA	119104078	119137189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13688.nic	chr10	+	2222	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-7	-115	intron_retention	FALSE	canonical	3	139	junction_1	82.6089243060337	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGGTCTTTCATCTTT	119098457	True	NA	-52	True	AAAACA	-1	NA	119104078	119137711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13691.nic	chr10	+	2495	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	139	junction_1	82.6089243060337	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	119098457	True	NA	26	True	AATAAA	-23	NA	119104078	119137984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_137.known	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_1	0	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8991_13672
transcript_1371.nic	chr1	+	1750	8	NIC	ENSG00000053372.5	novel	2049	8	NA	NA	3	-681	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	168.932542991671	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTGTGGTCCCCACTG	19246094	True	NA	16	True	AATAAA	-22	NA	19251807	19259447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_19252249_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_13734.known	chr10	+	992	2	FSM	ENSG00000119979.18	ENST00000472379.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTTGAACTCAGCAG	119098464	True	NA	NA	False	AATAAA	-15	NA	119104085	119105643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119104198_119104763
transcript_13735.known	chr10	+	824	5	FSM	ENSG00000119979.18	ENST00000493766.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	147.245543226272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGTATAAAAATTGTATT	119098473	True	NA	NA	False	NA	NA	NA	119104094	119111928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119104198_119104763_119105023_119105310_119105496_119107967_119108165_119111848
transcript_13741.nnic	chr10	-	1527	15	NNC	ENSG00000183605.17	novel	1029	15	NA	NA	-12	-16	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	92.3869413866241	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATTTGAAGAAAGAACACA	-119165711	False	NA	-26	True	AATAAA	-16	NA	119165726	119140928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_119141320_119142252_119142374_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_13743.nic	chr10	-	1493	14	NIC	ENSG00000183605.17	novel	1556	14	NA	NA	77	-3	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	74.1164923473165	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGAGTCCACCGTGC	-119165450	False	NA	-13	True	AATAAA	-29	NA	119165465	119140915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165201
transcript_13744.known	chr10	-	1556	14	FSM	ENSG00000183605.17	ENST00000355697.7	1556	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_11	32.6284444099835	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACCTTTGCCGCCCTC	-119163456	True	NA	NA	False	NA	NA	NA	119165714	119140766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_13762.known	chr10	-	1553	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	4576	junction_6	251.973157741499	5895	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTACCACCAGTA	-119152168	True	NA	-22	True	AATAAA	-15	NA	119178812	119167719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
transcript_1378.known	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	14.3652140603612	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_13784.known	chr10	-	923	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	7.90569415042095	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACACTACCTTTTAC	-119539452	True	NA	-24	True	ATTAAA	-26	NA	119542719	119499816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
transcript_138.known	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4001_+_0_4000
transcript_1380.nic	chr1	+	1782	9	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	20.1366425950306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	19311116	True	NA	8	True	AATAAA	-18	NA	19312301	19329284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_13801.known	chr10	-	2321	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	81.1799698201471	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119589867	True	NA	-33	True	AATAAA	-15	NA	119597029	119575411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_13802.nic	chr10	-	2023	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	90.3469777518257	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119597022	False	NA	-33	True	AATAAA	-15	NA	119597045	119575411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
transcript_13805.known	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	60.8408029679517	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-119589802	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_13806.known	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	71.6710806507959	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	-119596472	False	65	-4	True	AATAAA	-19	NA	119596495	119571801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
transcript_1381.known	chr1	+	1548	8	FSM	ENSG00000040487.13	ENST00000400548.6	1548	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.164402896553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311155	True	NA	24	True	AATAAA	-34	NA	19312340	19329300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_13812.known	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	63.806269284452	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589802	True	NA	-20	True	AATAAA	-28	NA	119596964	119575398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_13815.known	chr10	+	583	7	FSM	ENSG00000198825.15	ENST00000631485.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.0041665581654	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAACCTCCGAAAGCTAG	119804696	True	NA	-89	True	AAAAAG	-29	NA	119818685	119826771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119818745_119819519_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_13816.known	chr10	+	7148	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	24.9782621542595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTAGTGGTGCTTTT	119887305	True	NA	NA	False	ATTAAA	-16	NA	119892729	119944657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
transcript_13824.nic	chr10	+	1904	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-365	39995	-365	0	5prime_fragment	FALSE	canonical	3	313	junction_3	18.0554700852678	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	NA	False	NA	8	True	AATAAA	-19	NA	119892364	119904662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_13825.nic	chr10	+	1722	4	NIC	ENSG00000107651.14	novel	7148	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	136.521060646334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	119887305	True	NA	8	True	AATAAA	-19	NA	119892729	119904662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119892946_119898243_119898960_119902798_119903010_119904083
transcript_13826.known	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120355183	120354700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_120354700_120355200
transcript_13827.known	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_28	30.8055123612112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	120847039	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_13828.nic	chr10	+	1801	12	ISM	ENSG00000120008.16	ENST00000263461.11	4545	29	-17	31003	-17	-2354	5prime_fragment	TRUE	canonical	3	133	junction_4	9.1281057207718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGAAAGTACTTCTT	120847022	True	NA	NA	False	AATAAA	-20	NA	120851344	120878521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352
transcript_13829.known	chr10	+	2229	1	FSM	ENSG00000120008.16	ENST00000604714.1	2229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGTGTTCTCTGCA	120907282	False	NA	14	True	AATAAA	-16	NA	120907294	120909523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_120907300_120909500
transcript_1383.known	chr1	+	1512	8	FSM	ENSG00000040487.13	ENST00000469076.5	1512	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	25.0599281722833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	19311144	True	NA	8	True	AATAAA	-18	NA	19312329	19329284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_13830.known	chr10	-	4895	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	46.3136985964839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGGTGGTCATTA	-121924527	True	NA	-5	True	AATAAA	-17	NA	121928031	121740423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_13831.known	chr10	-	4886	12	FSM	ENSG00000107669.19	ENST00000224652.12	4895	12	-9	18	2	-9	multi-exon	FALSE	canonical	3	96	junction_5	45.9917347946507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	-121924536	True	NA	-23	True	GATAAA	-19	NA	121928040	121740441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121899865_121899995_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_13833.known	chr10	-	4835	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	293	10	-5	-9	multi-exon	FALSE	canonical	3	18	junction_11	61.6728237563568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	NA	False	NA	-23	True	GATAAA	-19	NA	121928492	121740441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
transcript_1384.known	chr1	+	2175	8	FSM	ENSG00000040487.13	ENST00000375153.8	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	15.0847943442449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_13840.nic	chr10	-	1559	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_10	216.519952891183	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974794	False	NA	NA	False	ATTAAA	-26	NA	121974817	121957090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974305
transcript_13841.nic	chr10	-	1473	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	217.11215995425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974792	False	NA	NA	False	ATTAAA	-26	NA	121974815	121957090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_13843.known	chr10	-	1391	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_5	37.6143589603758	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121965905	True	NA	NA	False	ATTAAA	-26	NA	121975217	121957090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
transcript_13844.nnic	chr10	-	1484	11	NNC	ENSG00000107672.15	novel	1391	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	227.482394923212	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974784	False	NA	NA	False	ATTAAA	-26	NA	121974807	121957090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974101_121974389
transcript_13851.known	chr10	+	14010	12	FSM	ENSG00000107679.15	ENST00000368990.8	3741	12	-12	-10257	0	10248	multi-exon	FALSE	canonical	3	111	junction_1	48.3161078833109	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCATGACTCGACTTTG	122370596	True	NA	NA	False	AATAAA	-17	NA	122374695	122442602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_13852.known	chr10	+	1214	6	FSM	ENSG00000166033.13	ENST00000420892.1	1214	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	4.87442304278158	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTAGTGCTTATTTT	NA	False	NA	9	True	ATTAAA	-18	NA	122506690	122514907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122506886_122507369_122507403_122508655_122508771_122510095_122510154_122511969_122512066_122514190
transcript_13857.known	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	5.55512151082224	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-122845725	True	NA	-10	True	AATAAA	-36	NA	122845857	122832157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_13858.known	chr10	-	1976	8	FSM	ENSG00000138161.14	ENST00000368900.5	1976	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	9.512612465478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	NA	False	NA	-10	True	AATAAA	-36	NA	122846175	122832157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122845761
transcript_13859.known	chr10	-	2125	8	FSM	ENSG00000138161.14	ENST00000368901.5	2125	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	7.97188938760212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	NA	False	NA	-10	True	AATAAA	-36	NA	122846175	122832157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122845761
transcript_1386.known	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	759.630823265039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-19456769	True	NA	-65	True	AAGAAA	-36	NA	19485485	19338822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_13862.nnic	chr10	-	814	5	NNC	ENSG00000213185.7	novel	704	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	7.71362431027076	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTTTGCTGCCAATA	-122879189	True	NA	NA	False	AATAAA	-18	NA	122879605	122849095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_122849440_122850423_122850551_122855644_122855787_122858605_122858686_122879484
transcript_13865.known	chr10	-	704	4	FSM	ENSG00000213185.7	ENST00000368896.1	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8193010820572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTTTGCTGCCAATA	-122879189	True	NA	NA	False	AATAAA	-18	NA	122879605	122849095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122849440_122850423_122850521_122855644_122855787_122879484
transcript_13866.known	chr10	-	728	4	FSM	ENSG00000213185.7	ENST00000368898.8	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.3387082795139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGATTGTTGATTA	-122879165	True	NA	NA	False	AATAAA	-36	NA	122879581	122849077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122849440_122850423_122850551_122855644_122855787_122879484
transcript_13867.known	chr10	-	645	3	FSM	ENSG00000213185.7	ENST00000462859.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTGCTGCCAATATT	-122879225	True	NA	NA	False	AATAAA	-20	NA	122879641	122849093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122849440_122855644_122855787_122879484
transcript_13868.known	chr10	+	1650	6	FSM	ENSG00000255624.4	ENST00000425266.3	1751	6	0	101	0	-101	multi-exon	FALSE	canonical	2	3	junction_1	5.49181208709839	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTATTCCTTGTTAGGAT	122879366	True	NA	-85	True	AAGAAA	-16	NA	122879680	122898615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122879761_122880670_122880757_122881597_122881668_122884716_122884853_122888268_122888724_122897792
transcript_13871.known	chr10	-	2991	6	FSM	ENSG00000119965.13	ENST00000368891.9	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	32.7022934975515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCACGTATTG	-122952871	True	NA	-3	True	AATAAA	-21	NA	122954311	122930902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953029_122954014
transcript_13873.nic	chr10	-	2119	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-39	5876	-39	-4174	5prime_fragment	FALSE	canonical	3	89	junction_1	7.29725975966321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGGAATTACACAGCA	-122952826	True	NA	NA	False	AATAAA	-20	NA	122954266	122936776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13874.nic	chr10	-	1711	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-114	6359	-30	-4657	5prime_fragment	FALSE	canonical	3	89	junction_1	7.29725975966321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGTAGTTTACAAGCT	-122952901	True	NA	-15	True	ATTAAA	-21	NA	122954341	122937259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13875.nic	chr10	-	1056	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	0	6900	0	-5198	5prime_fragment	FALSE	canonical	3	89	junction_1	7.29725975966321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATGTAGTCAAGTTA	-122952787	True	NA	NA	False	AATATA	-30	NA	122954227	122937800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13876.known	chr10	+	1705	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	15.1299922890485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	16	True	ATTAAA	-17	NA	122980039	122990390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_13878.known	chr10	+	1173	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	9.45304183847718	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122980086	True	NA	16	True	ATTAAA	-17	NA	122980400	122990390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_13879.nic	chr10	+	1022	6	NIC	ENSG00000179988.15	novel	1705	7	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	23.2155120555201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122980116	True	NA	16	True	ATTAAA	-17	NA	122980430	122990390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_122980696_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_13880.nic	chr10	+	729	5	NIC	ENSG00000179988.15	novel	818	5	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	22.3941956765587	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122954255	True	NA	16	True	ATTAAA	-17	NA	122954425	122990390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_13881.known	chr10	-	4532	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	7.54983443527075	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	-123007685	True	NA	-1	True	AATAAA	-21	NA	123008795	122990806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
transcript_13883.known	chr10	+	5848	11	FSM	ENSG00000196177.13	ENST00000358776.7	5848	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	14.3443368616329	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGGTACTCTTATAA	123007153	True	NA	13	True	AATAAA	-18	NA	123009005	123058290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_13886.known	chr10	+	1599	10	FSM	ENSG00000196177.13	ENST00000368869.8	1599	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.143277550394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCCAGTGATTCTCATG	123007126	True	NA	NA	False	NA	NA	NA	123008978	123054119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_123009068_123034355_123034516_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_13893.known	chr10	+	1361	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	0	0	0	0	multi-exon	TRUE	canonical	3	1276	junction_7	507.078466737221	1285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	123126546	True	NA	26	True	AATAAA	-21	NA	123154414	123165365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
transcript_13894.known	chr10	-	4809	8	FSM	ENSG00000182022.18	ENST00000435907.6	4809	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.60859057498307	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	-124093205	True	NA	2	True	NA	NA	NA	124093598	124007667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124093468
transcript_139.known	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4002_+_0_4000
transcript_1390.known	chr1	-	1462	9	FSM	ENSG00000077549.19	ENST00000433834.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	635.934892500797	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCTCCGAGCCTGC	-19484654	False	327	-27	True	AATAAA	-15	NA	19484664	19339358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19484189
transcript_13900.known	chr10	-	2039	10	FSM	ENSG00000065154.12	ENST00000368845.6	2039	10	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_4	39.3333333333333	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-124395982	True	NA	-1	True	AATAAA	-19	NA	124418923	124397302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124411972_124412201_124418872
transcript_13903.known	chr10	-	1864	9	FSM	ENSG00000065154.12	ENST00000539214.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	265.713161839981	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-124418966	False	NA	-1	True	AATAAA	-19	NA	124418976	124397302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124418872
transcript_13905.known	chr10	+	1634	7	FSM	ENSG00000107902.14	ENST00000368842.10	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	86.0697391654001	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458718	True	NA	4	True	AGTAAA	-18	NA	124461822	124614141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263
transcript_13907.known	chr10	+	840	6	FSM	ENSG00000107902.14	ENST00000392757.8	840	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	127.678659140829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACTATTTTGGGA	124458729	True	NA	4	True	AATAAA	-22	NA	124461833	124498514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124498327
transcript_13908.known	chr10	+	1522	6	FSM	ENSG00000107902.14	ENST00000368839.1	1522	6	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_5	126.900591015172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458738	True	NA	4	True	AGTAAA	-18	NA	124461842	124614141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124613263
transcript_1391.known	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1555	junction_8	173.515444197339	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-19456823	True	NA	-17	True	AATAAA	-21	NA	19485539	19338774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_13913.known	chr10	-	3599	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	119.611523971007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTGTCCTTGAATG	-124788602	True	NA	NA	False	ACTAAA	-16	NA	124791887	124757833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
transcript_13924.known	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	147.614904396541	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-124788583	True	NA	-22	True	ATTAAA	-15	NA	124791868	124760145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
transcript_13932.nnic	chr10	-	1249	6	NNC	ENSG00000203791.15	novel	4920	6	NA	NA	345	192	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	163.678954053354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGGATGGCGGTT	-124788238	False	NA	-46	True	AATATA	-14	NA	124791523	124759953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_124760504_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791330
transcript_13940.known	chr10	+	2955	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	11.2249721603218	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	124799782	True	NA	4	True	AATAAA	-18	NA	124801818	124836667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
transcript_13946.nic	chr10	+	2044	3	ISM	ENSG00000165660.8	ENST00000298492.6	2955	9	-32	18254	-32	-18254	5prime_fragment	FALSE	canonical	3	79	junction_2	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTAGACTCAGTTATT	124799750	True	NA	NA	False	NA	NA	NA	124801786	124818413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_124801902_124806830_124806922_124816575
transcript_13954.known	chr10	-	6939	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_10	202.5755414654	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTTTCTGAAAGAGC	-125160405	False	NA	-2	True	AATAAA	-22	NA	125160513	124984316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
transcript_13955.known	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	240.290261974971	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125158445	True	NA	-27	True	AATAAA	-18	NA	125161026	124989224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
transcript_13956.nnic	chr10	-	2385	11	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	-1363	253	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	256.549410445629	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTTTCACAAGCTGT	-125162425	False	NA	-11	True	AGTAAA	-33	NA	125162533	124988881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125162327
transcript_13957.known	chr10	-	2014	11	FSM	ENSG00000175029.17	ENST00000494626.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	306.463064658696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125160391	False	NA	-27	True	AATAAA	-18	NA	125160499	124989224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125133511_125133613_125160318
transcript_13961.nnic	chr10	-	2156	10	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	6862	253	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_9	248.130988903686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTTTCACAAGCTGT	-125151817	False	5260	-11	True	AGTAAA	-33	NA	125151854	124988881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125151773
transcript_13966.nnic	chr10	-	2320	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-10	253	combination_of_known_splicesites	FALSE	canonical	3	65	junction_9	238.141414569859	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTTTCACAAGCTGT	-125160963	False	373	-11	True	AGTAAA	-33	NA	125161071	124988881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_13972.known	chr10	+	4387	24	FSM	ENSG00000107938.18	ENST00000337623.7	4387	24	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	30.5933138228213	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	125714720	True	NA	15	True	AATAAA	-19	NA	125719702	125764139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_13974.known	chr10	-	718	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	-125719449	True	NA	-10	True	NA	NA	NA	125719546	125707236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125707760_125709497_125709568_125719421
transcript_13980.known	chr10	-	1336	10	FSM	ENSG00000188690.15	ENST00000368797.10	1336	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	104.462055252873	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	-125816821	True	NA	-13	True	AATAAA	-19	NA	125823258	125788585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_13982.known	chr10	-	1556	7	FSM	ENSG00000188690.15	ENST00000368778.7	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	118.365253910653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGTGGGATTAAGT	-125816759	True	NA	-1	True	AATAAA	-20	NA	125823196	125802056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125803025_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_13983.known	chr10	-	2389	8	FSM	ENSG00000089876.12	ENST00000368721.5	2389	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	14.4801059867584	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	NA	False	NA	NA	False	AATAAA	-20	NA	125854859	125836336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960
transcript_13995.known	chr10	+	1234	7	FSM	ENSG00000107949.17	ENST00000278100.11	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_6	341.857873326848	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGTTATTTTCT	125800836	True	NA	5	True	AATAAA	-27	NA	125823545	125836551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125836103
transcript_13996.known	chr10	+	2337	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_6	411.948891112586	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	125800836	True	NA	16	True	AATAAA	-20	NA	125823545	125842805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
transcript_13997.known	chr10	+	1433	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_7	509.475320345173	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	125800836	True	NA	5	True	ATTAAA	-18	NA	125823545	125853695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
transcript_14.known	ERCC-00041	+	1121	1	FSM	ERCC-00041A	EF011069	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00041_+_0_1100
transcript_140.known	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4003_+_0_4000
transcript_14000.known	chr10	+	1271	11	FSM	ENSG00000203780.12	ENST00000368693.6	1271	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.61801050302511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	125896383	True	NA	7	True	AATACA	-14	NA	125896563	126009592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_14002.nnic	chr10	+	1098	10	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	125896378	True	NA	7	True	AATACA	-14	NA	125896558	126009592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_125896656_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_14011.known	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.18241233033047	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-130110608	True	NA	-4	True	ATTAAA	-23	NA	130110830	130063895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
transcript_14014.known	chr10	+	3827	12	FSM	ENSG00000108010.12	ENST00000368644.5	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	528.628820394865	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTTGCCTTTTTTTG	130107019	True	NA	30	True	NA	NA	NA	130136398	130182881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112
transcript_14016.known	chr10	+	1318	11	FSM	ENSG00000108010.12	ENST00000331244.10	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	133.421737359397	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAATCTCTTTTTCTTA	130107011	True	NA	13	True	ATTAAA	-25	NA	130136390	130179672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341
transcript_14026.known	chr10	-	2861	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-90	-1229	-46	1229	multi-exon	FALSE	canonical	3	2425	junction_1	204.269821559622	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCGTATCTGAATG	-131981990	False	NA	NA	False	ATTAAA	-17	NA	131982013	131966454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_14029.known	chr10	+	2664	14	FSM	ENSG00000151640.13	ENST00000338492.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	10.3059700053648	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	132186527	True	NA	24	True	ATTAAA	-17	NA	132186947	132205759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_14032.nic	chr10	-	1792	12	NIC	ENSG00000165752.17	novel	1866	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	13.4453285383486	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	-132248968	True	NA	-11	True	NA	NA	NA	132249104	132207491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_14039.known	chr10	-	733	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGAGATTAATGCTGC	-132329968	True	NA	NA	False	NA	NA	NA	132331831	132324036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132324374_132331435
transcript_14040.nnic	chr10	-	975	2	NNC	ENSG00000165752.17	novel	733	2	NA	NA	-5	267	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGGTATTCTTT	-132329989	True	NA	NA	False	AGTAAA	-24	NA	132331852	132323769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_132324374_132331481
transcript_14043.nnic	chr10	-	898	2	NNC	ENSG00000165752.17	novel	830	4	NA	NA	-33	737	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTTGTGTCTAAT	-132330017	True	NA	NA	False	AATAAA	-24	NA	132331880	132329543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_132329997_132331435
transcript_14044.known	chr10	-	607	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	-132329974	True	NA	1	True	AATAAA	-25	NA	132331837	132330280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132330486_132331435
transcript_14045.nnic	chr10	-	596	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	-35	-10	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCGTATTCCCTCTTG	-132330019	True	NA	-9	True	AATAAA	-15	NA	132331882	132330290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_132330486_132331481
transcript_14046.known	chr10	+	7971	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.9778220097678	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCCTATTCTGTCCT	132331918	True	NA	NA	False	AATAAA	-17	NA	132332192	132381508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_14049.nnic	chr10	+	1154	3	NNC	ENSG00000171813.14	novel	2013	3	NA	NA	11389	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	132408553	True	NA	72	True	AATAAA	-18	NA	132408588	132417859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_132408826_132409761_132409880_132417060
transcript_14050.known	chr10	-	1578	2	FSM	ENSG00000226900.2	ENST00000654872.1	1578	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTGTGTTTTAGT	-132518227	True	NA	NA	False	AAGAAA	-25	NA	132518291	132510758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132512162_132518116
transcript_14052.known	chr10	-	1156	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.33238075793812	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTCTACCGAATTG	-132942146	True	NA	-10	True	AATAAA	-15	NA	132942543	132937114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_14054.known	chr10	+	2370	4	FSM	ENSG00000171798.19	ENST00000682765.1	2370	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.6891789161883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGATTTAGAGGAAAAATT	133159800	False	NA	-33	True	NA	NA	NA	133160422	133180799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133178834
transcript_14055.known	chr10	+	2459	3	FSM	ENSG00000151650.8	ENST00000325980.10	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	26	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCGTGGAGATTGCTTT	133236232	True	NA	17	True	GATAAA	-18	NA	133237854	133241928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133238156_133239675_133239837_133239931
transcript_14061.known	chr10	-	3929	18	FSM	ENSG00000130640.15	ENST00000252936.8	3929	18	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_17	33.7350761570476	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTGTCAGTCTCAGT	-133306312	True	NA	-3	True	AGTAAA	-16	NA	133308872	133278634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_14063.known	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	57.3955573193605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	-133308945	False	NA	NA	False	NA	NA	NA	133308977	133279286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_14068.nic	chr10	+	931	5	ISM	ENSG00000198546.15	ENST00000361518.10	1084	6	446	0	-80	0	3prime_fragment	FALSE	canonical	3	504	junction_4	32.5614803103299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133309088	True	NA	14	True	TTTAAA	-27	NA	133309359	133313161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_14069.known	chr10	+	605	4	FSM	ENSG00000198546.15	ENST00000463816.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	238.109685275972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATGTATTTTTAAACA	133309168	False	NA	-30	True	NA	NA	NA	133309439	133313117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133309464_133310163_133310289_133311715_133311842_133312787
transcript_14070.known	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	-133306288	True	NA	NA	False	NA	NA	NA	133308848	133301700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133302981_133308822
transcript_14071.known	chr10	+	744	5	FSM	ENSG00000165828.15	ENST00000433452.6	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGCCGGGTGCCTGTA	133347328	True	NA	NA	False	AATACA	-14	NA	133347372	133352683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352141_133352246
transcript_14072.known	chr10	+	587	5	FSM	ENSG00000165828.15	ENST00000463201.2	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.53553390593274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTGGCTCACCTCTGTA	133347323	True	NA	NA	False	AATAAA	-16	NA	133347367	133352548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352114_133352246
transcript_14076.known	chr10	-	762	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	79.0797066256571	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	-133355065	True	NA	-24	True	NA	NA	NA	133358025	133355159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_14079.known	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	87.5844735098636	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-133357605	False	NA	-67	True	NA	NA	NA	133357737	133355202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_14080.known	chr10	-	689	6	FSM	ENSG00000148803.12	ENST00000278025.9	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	28.6635657237546	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	-133355059	True	NA	-22	True	NA	NA	NA	133358019	133355157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_14081.known	chr10	-	867	6	FSM	ENSG00000148803.12	ENST00000465384.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	102.208414526398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGTCCAATTCCAGCTC	-133357869	False	NA	-33	True	NA	NA	NA	133358001	133355168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357463_133357922
transcript_14086.known	chr10	-	590	5	FSM	ENSG00000148803.12	ENST00000447176.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	109.609249153527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATTCCAGCTCTGTTC	-133357863	False	NA	-28	True	NA	NA	NA	133357995	133355163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357922
transcript_1410.known	chr1	+	669	5	FSM	ENSG00000173436.15	ENST00000498642.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2417.37671609123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGGTGGTCTTAA	19555494	True	NA	-29	True	NA	NA	NA	19597040	19626587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19625391_19625633_19626386
transcript_14102.known	chr10	-	1277	8	FSM	ENSG00000127884.5	ENST00000368547.4	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_2	109.924278204478	1791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTTGTAGTCATG	-133356964	True	NA	-46	True	ATTAAA	-20	NA	133373354	133362484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
transcript_1411.known	chr1	+	438	5	FSM	ENSG00000173436.15	ENST00000485362.1	438	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2335.18033297217	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAACAAAAAGAG	19555523	True	NA	-10	True	NA	NA	NA	19597069	19626606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19597833_19597854_19622099_19622148_19623473_19623584_19626386
transcript_14111.known	chr10	+	1283	11	FSM	ENSG00000148824.19	ENST00000477902.6	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	134.881281132706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	133380231	True	NA	NA	False	NA	NA	NA	133394093	133420464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394185_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14117.known	chr10	+	3424	11	FSM	ENSG00000148824.19	ENST00000317502.11	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_7	55.9396102953891	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGGAGCAAAGTGGGT	133380294	True	NA	4	True	NA	NA	NA	133394156	133422520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_1412.known	chr1	+	583	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	2292.63025802243	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCATTGCATGGC	19555454	True	NA	7	True	AATAAA	-12	NA	19597000	19626623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
transcript_14124.known	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	39.8859485143439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	133380333	True	NA	-11	True	NA	NA	NA	133394195	133421307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14127.nnic	chr10	+	1359	10	NIC	ENSG00000148824.19	novel	3424	11	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_6	140.124547774075	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	133380241	True	NA	NA	False	NA	NA	NA	133394103	133420464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14128.nnic	chr10	+	1413	10	NIC	ENSG00000148824.19	novel	3424	11	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_6	140.124547774075	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGTGCACCGTAGTGC	133380241	True	NA	NA	False	TTTAAA	-34	NA	133394103	133420518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14135.known	chr10	+	953	9	FSM	ENSG00000148824.19	ENST00000432508.3	953	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	159.336465929805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTTGAGGCTCAAGAC	133380311	True	NA	NA	False	NA	NA	NA	133394173	133420219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_1414.known	chr1	+	657	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2346.33863711102	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	19555492	True	NA	13	True	AATAAA	-18	NA	19597038	19626629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
transcript_14141.known	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_2	35.9421757827764	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	133380361	True	NA	-68	True	NA	NA	NA	133394223	133399804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
transcript_14145.known	chr11	-	2819	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	180	junction_1	6.64997911442	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATATGGTCTCTGTCGT	-207316	False	NA	-4	True	AATAAA	-33	NA	207428	202925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_205470_205610_205668_205951_206044_207302
transcript_14148.known	chr11	+	3506	10	FSM	ENSG00000177963.15	ENST00000526104.6	3506	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	35.9536738966502	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	206859	True	NA	17	True	AATAAA	-20	NA	207707	215113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_14152.known	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	32.0767309223784	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	-234797	True	NA	NA	False	TATAAA	-17	NA	236342	215029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_14153.known	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	68.8565336204359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-234798	True	NA	-42	True	GGGGCT	-22	NA	236343	216178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
transcript_14155.known	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	80.431475320438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	-236745	False	NA	NA	False	NA	NA	NA	236834	216610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
transcript_14157.nic	chr11	-	1074	4	NIC	ENSG00000142082.15	novel	1588	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	96.9065987891892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-234810	True	NA	-42	True	GGGGCT	-22	NA	236355	216178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_216719_218831_219042_224077_224240_236193
transcript_14163.known	chr11	+	1589	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_10	81.4876865272021	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	225304	True	NA	19	True	AATAAA	-19	NA	236975	252984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14168.known	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	327.660300810569	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	225354	True	NA	-12	True	NA	NA	NA	237025	252953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
transcript_1417.known	chr1	+	3723	4	FSM	ENSG00000173436.15	ENST00000322753.7	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	4584	junction_3	125.393602530414	4501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGACTCCATGGCGCT	19555432	True	NA	16	True	AATAAA	-22	NA	19596978	19629820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19626386
transcript_14172.known	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_9	80.6429740039289	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	225328	True	NA	1	True	AATAAA	-1	NA	236999	252966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14173.known	chr11	+	1489	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	322.619623531495	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225366	True	NA	16	True	AATAAA	-16	NA	237037	252981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14183.known	chr11	+	1591	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	355.170508347751	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225305	True	NA	16	True	AATAAA	-16	NA	236976	252981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14191.known	chr11	+	3699	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	58.7596649484327	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	285565	True	NA	NA	False	NA	NA	NA	289125	296107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_14194.known	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	664.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_314357_314673_314810_314921
transcript_14195.known	chr11	+	685	2	FSM	ENSG00000185201.18	ENST00000680344.1	685	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	293894	True	NA	29	True	AATAAA	-18	NA	308135	309395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_308443_309017
transcript_14196.known	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	236442	True	NA	24	True	AATAAA	-16	NA	314039	315271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_314357_314926
transcript_14198.known	chr11	+	907	2	FSM	ENSG00000185201.18	ENST00000616316.3	1006	2	99	0	99	0	multi-exon	FALSE	canonical	3	1446	junction_1	0	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	NA	False	NA	29	True	AATAAA	-18	NA	307914	309395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_308439_309012
transcript_14199.known	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	9849	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	299285	False	NA	-7	True	NA	NA	NA	313526	315240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_313692_313996_314357_314921
transcript_14200.known	chr11	+	668	2	FSM	ENSG00000185885.17	ENST00000408968.4	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	19705	junction_1	0	4600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_314357_314921
transcript_14201.known	chr11	+	634	3	FSM	ENSG00000185201.18	ENST00000527146.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGTGACTTCACC	294078	False	NA	26	True	AATAAA	-15	NA	308319	309392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_308439_308754_308890_309012
transcript_14202.known	chr11	-	725	3	FSM	ENSG00000142089.17	ENST00000531688.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	227.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGCGACTTCACC	-272974	True	NA	-24	True	AATAAA	-15	NA	320841	319678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_319991_320112_320249_320564
transcript_14204.known	chr11	-	591	2	FSM	ENSG00000142089.17	ENST00000681198.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272974	True	NA	-21	True	AATAAA	-18	NA	320841	319675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_319986_320560
transcript_14205.known	chr11	-	611	2	FSM	ENSG00000142089.17	ENST00000399808.5	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	8146	junction_1	0	5037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272993	True	NA	-21	True	AATAAA	-18	NA	320860	319675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_319991_320564
transcript_14206.known	chr11	+	1151	2	FSM	ENSG00000251661.3	ENST00000602429.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATAATAACGATTGAT	318490	False	NA	NA	False	ATTAAA	-17	NA	318652	325631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_318747_324574
transcript_14208.nic	chr11	-	1847	10	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	75.179948732079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413841	True	NA	-6	True	AATAAA	-17	NA	417398	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_14209.known	chr11	-	1598	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	69.8889772124508	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413768	True	NA	-6	True	AATAAA	-17	NA	417325	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
transcript_14210.known	chr11	-	1639	10	FSM	ENSG00000185187.13	ENST00000332725.7	1639	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	73.4499073443179	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413840	True	NA	-6	True	AATAAA	-17	NA	417397	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_14214.nnic	chr11	-	1488	9	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	69.0991135977879	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413818	True	NA	-6	True	AATAAA	-17	NA	417375	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417293
transcript_14215.nnic	chr11	-	1488	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	72.8078592941724	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413849	True	NA	-6	True	AATAAA	-17	NA	417406	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417324
transcript_1422.known	chr1	+	3678	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	2194.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGACTCCATGGCGCTT	19555430	True	NA	17	True	AATAAA	-23	NA	19596976	19629821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19623473_19623584_19626386
transcript_14220.nnic	chr11	-	1530	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	71.9024282182005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413852	True	NA	-6	True	AATAAA	-17	NA	417409	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
transcript_14221.nnic	chr11	-	1493	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	77.0115284240229	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413846	True	NA	-6	True	AATAAA	-17	NA	417403	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
transcript_14223.nnic	chr11	-	1323	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	64.4109890484852	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413852	True	NA	-6	True	AATAAA	-17	NA	417409	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
transcript_14224.nnic	chr11	-	1286	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	70.8044158659787	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413846	True	NA	-6	True	AATAAA	-17	NA	417403	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
transcript_14232.known	chr11	-	608	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	94.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-406213	True	NA	-6	True	AATAAA	-17	NA	407135	405715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_406060_406348_406539_407061
transcript_14237.nic	chr11	-	2017	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_10	133.515392371067	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-504690	False	NA	-4	True	ATTAAA	-15	NA	506871	494514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
transcript_14238.known	chr11	-	1829	11	FSM	ENSG00000023191.17	ENST00000533410.5	1829	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	145.246170345383	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATAATCATTAAAGCA	-505037	True	NA	-35	True	NA	NA	NA	507218	494545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_507112
transcript_1424.known	chr1	+	481	2	FSM	ENSG00000173436.15	ENST00000498067.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGTCAAGTGATTTG	19555444	True	NA	NA	False	AATAAA	-42	NA	19596990	19598195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19597833
transcript_14240.known	chr11	-	2014	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	142.986852542463	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-504619	False	NA	-4	True	ATTAAA	-15	NA	506800	494514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
transcript_14241.known	chr11	-	1952	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	153.820057209715	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-505061	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
transcript_14245.known	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	129.179270591753	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTATAATCATTAAAG	-504604	False	NA	-37	True	NA	NA	NA	506785	494547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
transcript_14246.known	chr11	-	1722	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	107.572657042623	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-505072	True	NA	-4	True	ATTAAA	-15	NA	507253	494514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
transcript_14247.known	chr11	-	1864	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	136.678861244565	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	-504640	False	NA	-2	True	ATTAAA	-17	NA	506821	494512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
transcript_14248.known	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	113.440145745087	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATATTTTGGACACTTT	NA	False	NA	-50	True	NA	NA	NA	507300	494560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
transcript_1425.known	chr1	+	455	1	FSM	ENSG00000226396.1	ENST00000457263.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATTCCTCAAAATATT	19608049	False	NA	-59	True	NA	NA	NA	19608113	19608568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19608100_19608600
transcript_14254.known	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	39.700881602302	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	NA	False	NA	-5	True	AGTAAA	-18	NA	535576	532241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
transcript_14255.nic	chr11	+	1576	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	185.60775845853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	557329	True	NA	12	True	AATAAA	-19	NA	560966	564025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_14257.nic	chr11	+	1489	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_4	166.607885467645	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	557329	True	NA	8	True	AATAAA	-15	NA	560966	564021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
transcript_14258.nnic	chr11	+	1517	5	NNC	ENSG00000099849.15	novel	1731	4	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	192.755674365244	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGAGTGTGTGTGGAGGC	557329	True	NA	6	True	AATAAA	-13	NA	560966	564019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_561034_561761_561893_562078_562777_563188_563348_563557
transcript_1426.known	chr1	-	2946	16	FSM	ENSG00000162542.14	ENST00000294543.11	2946	16	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_15	14.9383920003311	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACTTCTTGAGCATG	-19799721	True	NA	-28	True	AATAAA	-16	NA	19799916	19682239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19683445_19694433_19694552_19700767_19700886_19737371_19737457_19739823_19739961_19740776_19740942_19745531_19745652_19746455_19746600_19747162_19747261_19755633_19755767_19770541_19770570_19771307_19771483_19780579_19780767_19787025_19787118_19798136_19798216_19799854
transcript_14260.known	chr11	+	1679	4	FSM	ENSG00000099849.15	ENST00000414138.6	1679	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	189.996491195671	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557333	True	NA	-33	True	NA	NA	NA	560970	563980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_561034_561761_561893_562083_562777_563188
transcript_14261.known	chr11	+	2210	2	FSM	ENSG00000254815.6	ENST00000527620.5	2210	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	NA	False	NA	10	True	ATTAAA	-14	NA	557594	560106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_559477_559778
transcript_14262.known	chr11	-	1965	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	0	7	0	multi-exon	FALSE	canonical	2	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTGTTGTTA	-567821	True	NA	-2	True	TATAAA	-16	NA	568420	565659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_567556_568351
transcript_14263.known	chr11	-	367	2	FSM	ENSG00000247095.4	ENST00000534540.2	966	2	72	527	58	-382	multi-exon	FALSE	canonical	2	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGAGGGAGAGGCAGA	-567770	False	NA	NA	False	NA	NA	NA	568369	567525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_567854_568330
transcript_14264.known	chr11	-	816	2	FSM	ENSG00000247095.4	ENST00000533920.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	2	149	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCCGCCCTGCTGTGG	-567858	True	NA	-90	True	NA	NA	NA	568457	567143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_567854_568351
transcript_14265.known	chr11	-	1923	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	13.5262707351287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-615107	True	NA	-3	True	AATAAA	-16	NA	615950	612554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_14268.known	chr11	-	1807	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	22.2299986393651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-615078	False	NA	-3	True	AATAAA	-16	NA	615921	612554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_1427.known	chr1	-	813	5	FSM	ENSG00000188257.12	ENST00000649436.1	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.82623792124926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	-19979491	True	NA	1	True	AATAAA	-20	NA	19979621	19975430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19975844_19978014_19978122_19978379_19978485_19978733_19978880_19979579
transcript_14270.known	chr11	-	1596	9	FSM	ENSG00000185507.21	ENST00000469048.6	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	21.2599241532043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCTAATAAAAAGAACT	-614769	False	NA	-31	True	NA	NA	NA	615612	612582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614475_614535_614796_615008_615096_615260_615344
transcript_14271.known	chr11	+	3030	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_12	67.0004477596978	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTCTCAGTTCTCT	705211	True	NA	17	True	ATTAAA	-20	NA	706230	727727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_14272.known	chr11	-	2190	12	FSM	ENSG00000177030.19	ENST00000382409.4	2190	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	184.747180387569	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-694982	True	NA	-15	True	AATAAA	-15	NA	695222	644232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
transcript_14276.nic	chr11	+	846	6	NIC	ENSG00000177042.16	novel	1423	5	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_1	54.872215191297	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695721	True	NA	26	True	AATAAA	-23	NA	695739	704129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
transcript_14277.known	chr11	+	1597	6	FSM	ENSG00000177106.17	ENST00000527832.5	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	73.2518941734615	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	724492	True	NA	12	True	ATTAAA	-15	NA	724561	727722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_14279.known	chr11	+	1423	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	52.4928566568824	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	694454	True	NA	26	True	AATAAA	-23	NA	695815	704129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
transcript_1428.known	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.27760839478607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-19979488	True	NA	NA	False	NA	NA	NA	19979618	19975672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
transcript_14283.nnic	chr11	+	1241	5	NNC	ENSG00000177106.17	novel	750	3	NA	NA	-158	0	intron_retention	FALSE	canonical	0	0	junction_1	118.508174823512	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	725512	False	NA	14	True	ATTAAA	-17	NA	725922	727724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_725953_726097_726171_726303_726485_726618_726752_726900
transcript_14285.nic	chr11	+	1383	4	ISM	ENSG00000177106.17	ENST00000527832.5	1597	6	1364	-2	-155	0	3prime_fragment	FALSE	canonical	3	257	junction_3	13.5728487143349	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	725515	False	NA	14	True	ATTAAA	-17	NA	725925	727724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_726171_726303_726485_726618_726752_726900
transcript_14286.known	chr11	-	691	2	FSM	ENSG00000177030.19	ENST00000527658.1	691	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGCCCCACACGGCCG	NA	False	NA	-16	True	AATAAA	-14	NA	646596	644233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_644655_646326
transcript_14291.known	chr11	+	1199	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	0	0	0	0	multi-exon	FALSE	canonical	3	2011	junction_1	95.2401904531434	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	713369	True	NA	18	True	ATTAAA	-15	NA	747463	765012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
transcript_1430.known	chr1	-	510	2	FSM	ENSG00000187980.7	ENST00000442226.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCTCACCGTGTGTG	-20186446	True	NA	NA	False	TTTAAA	-38	NA	20186486	20184241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20184625_20186359
transcript_14308.known	chr11	+	1191	4	FSM	ENSG00000177156.11	ENST00000530119.5	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	2011	junction_1	51.6333225737023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCAGTTAGCTGAGATC	713369	True	NA	NA	False	NA	NA	NA	747463	760965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_747579_755878_756003_758949_759058_760121
transcript_1431.known	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	17.4547032821147	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-20505416	True	NA	-1	True	ATTAAA	-15	NA	20508151	20499447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
transcript_14315.known	chr11	-	790	8	FSM	ENSG00000177225.17	ENST00000397472.6	790	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	18.3992014023679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	-774590	False	NA	-23	True	AATAAA	-21	NA	777471	767221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_767374_770313_770399_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_14316.nic	chr11	-	760	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	14.243907079481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-23	True	AATAAA	-21	NA	777526	767221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_14321.known	chr11	-	1605	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTCTTGCATCCTCAT	-786159	False	3931	-24	True	AATAAA	-15	NA	790090	787114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_788659_790029
transcript_14327.known	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	32.3377240241444	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794350	True	NA	-3	True	AATAAA	-18	NA	798281	790474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
transcript_1433.known	chr1	+	809	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	14.1656862405839	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587400	True	NA	14	True	TATAAA	-20	NA	20589096	20618903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
transcript_14330.known	chr11	-	2796	10	FSM	ENSG00000177542.11	ENST00000320230.9	2796	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	99.3031273984415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794668	False	NA	-3	True	AATAAA	-18	NA	796263	790474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_796042
transcript_14336.known	chr11	+	637	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	7720	junction_3	816.163518474631	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	675424	True	NA	26	True	AATAAA	-16	NA	809983	812874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_810358_811596_811646_812534_812634_812759
transcript_14337.known	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	7240	junction_1	999.696078815957	14724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	675407	True	NA	28	True	AATAAA	-18	NA	809966	812876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
transcript_14338.known	chr11	+	353	4	FSM	ENSG00000177600.9	ENST00000532004.5	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4123.6359630253	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCATGAGCACTTTGT	675405	True	NA	32	True	AATAAA	-22	NA	809964	812880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_810049_811596_811646_812534_812634_812759
transcript_1434.known	chr1	+	762	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	33.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587389	True	NA	14	True	TATAAA	-20	NA	20589085	20618903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_20589284_20604927_20605040_20618451
transcript_14340.known	chr11	+	714	4	FSM	ENSG00000177685.17	ENST00000526531.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	123.060960503321	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACTCAGGATGCAGGCT	827670	True	NA	NA	False	NA	NA	NA	830484	831780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_830714_830865_831033_831223_831296_831534
transcript_14342.nic	chr11	+	816	3	ISM	ENSG00000177685.17	ENST00000450448.5	1663	8	2162	5	-63	0	3prime_fragment	FALSE	canonical	3	140	junction_1	184	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	827607	True	NA	5	True	AATAAA	-15	NA	830421	831986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_830714_831223_831296_831534
transcript_14343.nnic	chr11	+	893	3	NNC	ENSG00000177685.17	novel	1792	9	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	244.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	827626	True	NA	5	True	AATAAA	-15	NA	830440	831986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_830714_831127_831296_831534
transcript_14346.known	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_1	88.9634756515279	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	828996	True	NA	7	True	AATAAA	-16	NA	832951	838831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_14348.known	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	111.882226707647	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	828996	True	NA	10	True	AATAAA	-19	NA	832951	838834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_14351.known	chr11	+	1835	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	94.1949779847685	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	829036	True	NA	11	True	AATAAA	-20	NA	832991	838835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
transcript_14354.known	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3246	junction_1	0	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-794488	True	NA	-3	True	GGGGCT	-42	NA	842529	839720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_840481_842413
transcript_14360.known	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	168.67850337254	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	838838	True	NA	14	True	AATAAA	-14	NA	842851	867111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14362.known	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	217.460341211909	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	838927	True	NA	19	True	AATAAA	-19	NA	842940	867116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14364.nnic	chr11	+	1449	9	NNC	ENSG00000214063.12	novel	1379	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	218.402116232879	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	838898	True	NA	14	True	AATAAA	-14	NA	842911	867111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_843046_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14367.known	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	242.711763208955	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	844188	False	NA	19	True	AATAAA	-19	NA	844445	867116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14368.nic	chr11	+	1505	8	NIC	ENSG00000214063.12	novel	1379	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	238	junction_1	178.562056896938	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	842794	False	NA	14	True	AATAAA	-14	NA	842804	867111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865826_865917_866002_866561
transcript_14370.known	chr11	+	1332	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	276.127669377624	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	842805	False	NA	19	True	AATAAA	-19	NA	842823	867116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14371.known	chr11	+	1025	8	FSM	ENSG00000214063.12	ENST00000397411.6	1025	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	241.372774617459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCCCCTGGGAGGGGT	842793	True	NA	NA	False	NA	NA	NA	842811	866817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_842916_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14385.known	chr11	+	1426	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	235.108485597607	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	844015	False	NA	19	True	AATAAA	-19	NA	844080	867116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_1439.known	chr1	-	1941	11	FSM	ENSG00000244038.11	ENST00000602624.7	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	3524	junction_4	190.042863586087	1226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCACCTGGCCCCGGTCCT	-20625590	True	NA	-4	True	AATAAA	-42	NA	20661369	20651776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
transcript_14391.known	chr11	-	1431	14	FSM	ENSG00000177830.18	ENST00000528581.5	1431	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	274.488744770923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGTCTGCTGCAGTCCTC	-903334	True	NA	-13	True	AATACA	-23	NA	910810	869762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_903703_903779_904705_904860_910774
transcript_14392.known	chr11	-	1477	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	255.784163820864	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGGGTCTGCTGCAGT	-903355	True	NA	-17	True	AATACA	-19	NA	910831	869766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_14397.known	chr11	-	3260	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_12	128.784919752103	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTTTGTGCTGCCAG	-903334	True	NA	NA	False	NA	NA	NA	910810	867858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_144.known	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_17	3356.7859535151	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
transcript_14400.nic	chr11	-	1406	13	NIC	ENSG00000177830.18	novel	1477	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	292.388250257921	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-903372	True	NA	-12	True	AATACA	-24	NA	910848	869761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_14408.known	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	194.016783801542	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-903359	True	NA	-12	True	AATACA	-24	NA	910835	869761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_14418.known	chr11	-	602	5	FSM	ENSG00000177830.18	ENST00000529539.5	602	5	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	300.802260629803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCATGTGCCTGTA	NA	False	NA	-19	True	AATAGA	-14	NA	883249	868394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_868672_869857_869957_870120_870164_870418_870500_883147
transcript_14419.known	chr11	+	4587	22	FSM	ENSG00000183020.15	ENST00000448903.7	4587	22	0	0	0	0	multi-exon	FALSE	canonical	2	112	junction_17	26.4050946777949	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	918461	True	NA	9	True	AATAAA	-14	NA	925869	1012240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985434_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_14422.known	chr11	-	3627	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	15.1182009511714	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGTTCCCGAGTAT	-1306373	True	NA	-1	True	AATAAA	-21	NA	1309632	1274370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
transcript_14423.known	chr11	+	939	1	FSM	ENSG00000255153.1	ENST00000530897.1	939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGACTGGCCTGGAA	1309595	True	NA	5	True	AATAAA	-16	NA	1309768	1310707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_1309800_1310700
transcript_14424.known	chr11	-	795	5	FSM	ENSG00000182208.15	ENST00000526462.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	38.3234588731237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGGCAGTGGGG	-1501236	True	NA	NA	False	NA	NA	NA	1501247	1470244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1501076
transcript_14425.nnic	chr11	-	1367	4	NNC	ENSG00000182208.15	novel	1745	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	42.4970587217516	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTGTACGTCTCAGC	-1480787	False	NA	-7	True	AATAAA	-19	NA	1480886	1469456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_1470489_1471294_1471420_1480392_1480487_1480770
transcript_14426.known	chr11	-	1745	5	FSM	ENSG00000182208.15	ENST00000329957.7	1745	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.1687056206865	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTGTACGTCTCAGC	NA	False	NA	-7	True	AATAAA	-19	NA	1486779	1469456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1486446
transcript_14427.known	chr11	-	2035	9	FSM	ENSG00000117984.15	ENST00000433655.6	2035	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	359.301318533623	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCTCCGGCCTCCCCTC	-1755164	True	NA	-25	True	AATACA	-5	NA	1763930	1752774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1753671_1753802_1753902_1753993_1754132_1754901_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_14428.known	chr11	-	989	5	FSM	ENSG00000130600.20	ENST00000428066.7	1243	5	0	254	0	9	multi-exon	FALSE	canonical	3	33	junction_2	8.8423695919137	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGCGTGAGTGTGA	NA	False	NA	NA	False	NA	NA	NA	2001470	1995429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_2001217
transcript_14429.known	chr11	+	992	6	FSM	ENSG00000184281.15	ENST00000380992.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	116.466991031794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGCCTAGCTGGAA	2400573	False	NA	NA	False	GGGGCT	-16	NA	2400627	2403701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2401975_2402148_2402293_2402451_2402610_2402653_2402844_2403150_2403556
transcript_14432.known	chr11	+	1544	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	103.704708989836	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTATCTGGGCCC	2400463	False	NA	15	True	AATAAA	-21	NA	2400487	2403878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
transcript_14434.known	chr11	+	863	4	FSM	ENSG00000184281.15	ENST00000435795.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	138.348191973087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCATGAGTGACAACG	2397672	True	NA	NA	False	NA	NA	NA	2400762	2402971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2401838_2402148_2402293_2402451_2402610
transcript_14435.known	chr11	+	851	4	FSM	ENSG00000184281.15	ENST00000440813.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	124.980887427727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCATGGAGGCCTGC	2399009	False	NA	NA	False	NA	NA	NA	2402099	2403448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2402148_2402293_2402451_2402610_2402653_2402844
transcript_14437.known	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	62	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	2397659	True	NA	13	True	AATAAA	-19	NA	2400749	2403876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2402293_2402451_2402610
transcript_14439.known	chr11	+	1423	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2399202	False	NA	12	True	AATAAA	-18	NA	2402292	2403875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2402451_2402610
transcript_14440.known	chr11	+	1543	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_3	12.5857061780418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	2901600	True	NA	8	True	AATAAA	-21	NA	2902277	2925246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_14441.known	chr11	+	1225	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	27.8702350187436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	2901605	True	NA	-11	True	AATAAA	-2	NA	2902282	2925227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_14451.known	chr11	-	1941	16	FSM	ENSG00000205531.13	ENST00000526115.5	1941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	564.372863352668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGTAGAGTAGGG	-2977383	True	NA	NA	False	NA	NA	NA	2992377	2945111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2989128_2989272_2992253
transcript_14454.known	chr11	-	2463	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	509.580699093764	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCACTGTGCCATGTGG	-2977335	True	NA	-10	True	ATTAAA	-16	NA	2992329	2944436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14458.nic	chr11	-	2394	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	514.665043637954	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	-2977273	True	NA	-4	True	ATTAAA	-22	NA	2992267	2944430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992228
transcript_14459.known	chr11	-	2479	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	407.952678328139	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	-2977383	True	NA	-4	True	ATTAAA	-22	NA	2992377	2944430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14460.nic	chr11	-	2430	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	506.551506336156	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	-2977298	True	NA	-4	True	ATTAAA	-22	NA	2992292	2944430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972280_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14461.nic	chr11	-	1390	15	ISM	ENSG00000205531.13	ENST00000380542.9	2463	16	-34	4687	14	-3527	5prime_fragment	FALSE	canonical	0	0	junction_5	474.015741794919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACTGTGTCACAGGTT	-2977369	True	NA	NA	False	AATAAA	-22	NA	2992363	2949123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14464.nic	chr11	-	1833	12	ISM	ENSG00000205531.13	ENST00000620138.4	2479	15	-9	9448	-9	425	5prime_fragment	FALSE	canonical	0	0	junction_2	447.705943192904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGTATGTTCTAGATG	-2977392	True	NA	1	True	AATAAA	-22	NA	2992386	2953878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14469.known	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_21	152.40881978123	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049797	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_14473.known	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	94.7829600920414	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049792	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_14474.nic	chr11	-	2584	22	NIC	ENSG00000110619.18	novel	2805	23	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_20	124.572629963626	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049846	True	NA	-9	True	AATAAA	-17	NA	3057472	3000928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
transcript_14483.known	chr11	-	2685	22	FSM	ENSG00000110619.18	ENST00000397111.9	2685	22	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_1	53.3082423972409	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	NA	False	NA	-2	True	AATAAA	-24	NA	3057613	3000921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_14489.nic	chr11	-	1580	9	ISM	ENSG00000110619.18	ENST00000278224.13	2491	22	-54	25176	-31	2979	5prime_fragment	FALSE	canonical	3	522	junction_8	37.5464295905749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTCTCTGCCTG	-3049846	True	NA	NA	False	NA	NA	NA	3057472	3026104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_14490.nic	chr11	-	1386	9	ISM	ENSG00000110619.18	ENST00000278224.13	2491	22	-54	25370	-31	2785	5prime_fragment	FALSE	canonical	3	522	junction_8	37.5464295905749	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGTCACCCTACTGTGC	-3049846	True	NA	-36	True	AATATA	-19	NA	3057472	3026298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_14495.known	chr11	+	293	2	FSM	ENSG00000234791.1	ENST00000455154.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGGCTGTGAGCTC	3189475	False	NA	NA	False	AATACA	-14	NA	3189545	3189929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3189619_3189709
transcript_14498.known	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	138.743792653942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	-3372661	True	NA	-55	True	NA	NA	NA	3379146	3359116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14499.known	chr11	-	1001	6	FSM	ENSG00000005801.18	ENST00000528410.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	152.876420680234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAACATTACAGATGTGA	-3372654	True	NA	NA	False	ATTAAA	-40	NA	3379139	3360038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3360719_3360789_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14504.known	chr11	-	2389	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	168.639259960426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	-3372733	True	NA	63	True	AATATA	-43	NA	3379218	3358944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
transcript_14507.known	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	161.001552787543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	-3372631	True	NA	14	True	AATAAA	-40	NA	3379116	3358993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_14508.nic	chr11	-	2645	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	-18	-283	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	148.627050027914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTTGTTTTATAT	-3372714	True	NA	-4	True	AGTAAA	-17	NA	3379199	3358385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14509.nic	chr11	-	2832	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	-1	-283	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	186.476540079443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTTGTTTTATAT	-3372697	True	NA	-4	True	AGTAAA	-17	NA	3379182	3358385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3377616_3377901_3379037
transcript_14511.nic	chr11	-	2468	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	-18	382	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	148.627050027914	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGATGCTGTGTCTTC	-3372714	True	NA	-2	True	NA	NA	NA	3379199	3358562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14512.known	chr11	-	560	5	FSM	ENSG00000005801.18	ENST00000427810.6	560	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	199.184587757186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCCTTGATAATTTAT	-3372615	True	NA	NA	False	AAAAAG	-22	NA	3379100	3360477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3377616_3377803_3379037
transcript_14519.nic	chr11	-	698	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	-18	11	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	148.627050027914	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACTTTTCAAATTTACA	-3372714	True	NA	-17	True	AATAAA	-16	NA	3379199	3360332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14520.known	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	40.2326567189723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	-3372660	True	NA	-14	True	AATAAA	-15	NA	3379145	3357926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
transcript_14536.nnic	chr11	+	1656	13	NIC	ENSG00000223756.8	novel	1329	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_11	42.4659177066347	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	3374662	True	NA	14	True	AATGAA	-18	NA	3380957	3408978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406698_3407621_3407698_3408685
transcript_14538.nnic	chr11	+	1674	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	37.0347997009419	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	3374662	True	NA	14	True	AATGAA	-18	NA	3380957	3408978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
transcript_14550.nnic	chr11	+	1330	5	NIC	ENSG00000223756.8	novel	1244	4	NA	NA	-3	-4	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	15.7955689989313	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGACAGCGGTGTGCA	3374662	True	NA	NA	False	AATAAA	-14	NA	3380957	3398086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116
transcript_14552.known	chr11	-	1217	2	FSM	ENSG00000287906.1	ENST00000659225.1	1217	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTCCAATTAGCAG	-3477033	True	NA	NA	False	AAAAAG	-9	NA	3477065	3475279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3476374_3476942
transcript_14554.nnic	chr11	-	678	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	11.1455023315337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3641549	True	NA	-13	True	ATTAAA	-18	NA	3642014	3638511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638794_3639002_3639036_3639641_3639796_3641805
transcript_14555.known	chr11	-	1232	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	4.32049379893857	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3641527	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
transcript_14558.nic	chr11	-	1402	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-44	0	intron_retention	FALSE	canonical	2	14	junction_1	8.2192186706253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3642012	False	NA	-13	True	ATTAAA	-18	NA	3642036	3638511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638920_3639002_3639036_3639641_3640372_3641805
transcript_14560.known	chr11	-	3923	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_10	33.1723443870487	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATGGCCTTATTTT	-3782114	True	NA	NA	False	TATAAA	-22	NA	3797541	3711552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_14566.known	chr11	+	1843	7	FSM	ENSG00000148985.20	ENST00000300730.10	1843	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	82.8440636913043	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3797805	False	NA	18	True	AATAAA	-18	NA	3797818	3826352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14567.known	chr11	+	1837	7	FSM	ENSG00000148985.20	ENST00000396986.6	1837	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	79.5089093540256	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	3797805	False	NA	0	True	NA	NA	NA	3797818	3826334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_1457.known	chr1	+	2657	8	FSM	ENSG00000158828.8	ENST00000321556.5	2657	8	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_3	27.5251276665745	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTTCTCTTC	20628961	True	NA	15	True	AGTAAA	-17	NA	20633457	20651511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_20633936_20637841_20638130_20639891_20639993_20644489_20644673_20645559_20645724_20648504_20648633_20648994_20649232_20650433
transcript_14571.known	chr11	+	1798	7	FSM	ENSG00000148985.20	ENST00000396991.6	1798	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	84.5841132968965	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGGGCTCATCTTGT	3808253	False	NA	36	True	AATAAA	-36	NA	3808289	3826370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808316_3811249_3811425_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14577.known	chr11	+	863	6	FSM	ENSG00000148985.20	ENST00000464229.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	92.4705358479121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAAACATCACCTTTAC	3797457	True	NA	NA	False	NA	NA	NA	3797923	3825652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14578.known	chr11	+	1566	6	FSM	ENSG00000148985.20	ENST00000396993.8	1566	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	89.6758607430116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAATAAATTTTTT	3797435	True	NA	-13	True	NA	NA	NA	3797901	3826321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14585.known	chr11	+	798	6	FSM	ENSG00000148985.20	ENST00000469307.4	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	63.5968552681656	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAGCGATTCTGAAC	3805464	True	NA	NA	False	NA	NA	NA	3808598	3825440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14588.known	chr11	+	931	6	FSM	ENSG00000148985.20	ENST00000463452.6	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	42.7859790118212	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCTTGGCCTTACTGA	3805444	True	NA	NA	False	AAGAAA	-33	NA	3808578	3825541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14593.known	chr11	+	894	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	85.7997668994503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGGGTGTAGGCCAA	3805459	True	NA	NA	False	NA	NA	NA	3808593	3825578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14600.nic	chr11	+	1589	5	NIC	ENSG00000148985.20	novel	894	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	74.6537842309417	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805410	True	NA	18	True	AATAAA	-18	NA	3808544	3826352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14601.known	chr11	+	1530	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53.1718910703766	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3805459	True	NA	-4	True	NA	NA	NA	3808593	3826330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14604.nic	chr11	+	1735	4	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	78	junction_1	58.1626073082087	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805410	True	NA	18	True	AATAAA	-18	NA	3808544	3826352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3823882_3824377_3825019_3825129_3825327
transcript_14611.known	chr11	-	1295	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCTCCTCCCTGTGT	-3836449	True	NA	-8	True	AATAAA	-18	NA	3840959	3826977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3828207_3840893
transcript_14613.known	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_7	62.2585459451944	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	4083452	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_14618.nic	chr11	+	1803	13	ISM	ENSG00000167325.15	ENST00000300738.10	3142	19	-3	11983	-3	0	5prime_fragment	FALSE	canonical	3	695	junction_7	51.8316586010262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGTCTGTCTCATTTGGT	4083449	True	NA	8	True	AATAAA	-18	NA	4094795	4126949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683
transcript_14619.known	chr11	+	583	4	FSM	ENSG00000167325.15	ENST00000526350.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	52.550504807809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTTTTAATAATGCA	4083505	True	NA	NA	False	AATAAA	-39	NA	4094851	4107570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434
transcript_1462.known	chr1	-	3884	13	FSM	ENSG00000127483.19	ENST00000312239.10	3884	13	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_12	112.565875774539	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20781966	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_14621.known	chr11	+	462	2	FSM	ENSG00000254480.2	ENST00000525365.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCAACTTGATCTTTG	4187110	True	NA	NA	False	ATTAAA	-20	NA	4187139	4202655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_4187205_4202258
transcript_14624.known	chr11	-	1935	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	11.8988794990677	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-4392184	True	NA	-14	True	AATAAA	-23	NA	4393702	4384896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
transcript_14627.known	chr11	-	3324	7	FSM	ENSG00000167333.13	ENST00000300747.10	3324	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGACTGCTTCTTGAG	-4607415	True	NA	0	True	AATAAA	-19	NA	4608231	4598671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602413_4603244_4603341_4605078_4605562_4608026
transcript_14628.nnic	chr11	-	2233	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11091	-4104	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	25	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGAGTCATACAAGGA	-5165494	True	NA	NA	False	AATAAA	-20	NA	5165848	5150927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_14629.nnic	chr11	-	1747	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11091	-4590	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	25	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACATGCTTTTTTCTTT	-5165494	True	NA	NA	False	CATAAA	-17	NA	5165848	5151413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_14632.known	chr11	+	3217	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.5893221772681	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5592580	True	NA	15	True	AATAAA	-18	NA	5596108	5612952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14635.known	chr11	+	1767	8	FSM	ENSG00000121236.21	ENST00000507320.5	1767	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	75.6484889310488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGTCTCCCAAAGTGCT	5592584	True	NA	NA	False	NA	NA	NA	5596112	5611700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5596182_5603607_5603736_5604533_5604798_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14636.known	chr11	+	2293	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.18157963590287	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	5624900	True	NA	15	True	AATAAA	-26	NA	5625000	5644398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
transcript_14637.nic	chr11	+	2725	7	NIC	ENSG00000121236.21	novel	3217	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	87.6825080744285	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5592582	True	NA	15	True	AATAAA	-18	NA	5596110	5612952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_5596182_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14640.known	chr11	-	3364	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	19.5625631641414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGGGTAATCCATTA	-5683519	True	NA	NA	False	TTTAAA	-41	NA	5685074	5663194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_14641.known	chr11	-	2862	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	32.2262410504995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-5683542	True	NA	26	True	AATAAA	-8	NA	5685097	5663571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_14643.known	chr11	-	2290	11	FSM	ENSG00000132256.20	ENST00000380027.5	2290	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	77.4765125699395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATCTAAGTGTCTTGA	NA	False	NA	35	True	AATAAA	-17	NA	5872358	5663562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5664174_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015_5685395_5855751_5855855_5861164_5861362_5872314
transcript_14645.known	chr11	-	3170	7	FSM	ENSG00000132256.20	ENST00000396847.7	3170	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	21.0211533672367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	-5683487	True	NA	-19	True	AATAAA	-9	NA	5685042	5663616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_14646.nic	chr11	-	1281	7	ISM	ENSG00000132256.20	ENST00000684655.1	2862	8	-7	1848	-5	0	5prime_fragment	FALSE	canonical	3	80	junction_6	34.5032204616065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCTGTTAATTTTTCT	-5683549	True	NA	1	True	AATAAA	-19	NA	5685104	5665419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_14647.nic	chr11	-	1064	4	ISM	ENSG00000132256.20	ENST00000684417.1	1317	8	-30	12496	0	168	5prime_fragment	FALSE	canonical	3	119	junction_3	27.7248384425711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCTCTGCGTTGCTG	-5683519	True	NA	NA	False	ATTAAA	-16	NA	5685074	5678151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_5678435_5679073_5679170_5679760_5680239_5684867
transcript_14648.nic	chr11	-	946	4	ISM	ENSG00000132256.20	ENST00000682968.1	2669	7	-5	14486	-5	168	5prime_fragment	FALSE	canonical	3	80	junction_3	46.0506967012082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCTCTGCGTTGCTG	-5683549	True	NA	NA	False	ATTAAA	-16	NA	5685104	5678151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_5678435_5679073_5679170_5679760_5680239_5685015
transcript_14649.known	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	62.8915490250917	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	5688088	True	NA	11	True	AATAAA	-17	NA	5689789	5710863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_1465.known	chr1	-	6406	13	FSM	ENSG00000127483.19	ENST00000438032.6	6406	13	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_12	107.21664853101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGCCTAGAGTAT	-20784452	True	NA	NA	False	ATTAAA	-22	NA	20787307	20740265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20787194
transcript_14654.known	chr11	+	1002	7	FSM	ENSG00000132274.16	ENST00000454828.5	1002	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	79.2520592091391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTGCTTTTGGTGTC	5688178	True	NA	NA	False	NA	NA	NA	5689879	5709163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5689900_5696166_5696656_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_14659.known	chr11	+	1333	2	FSM	ENSG00000180988.3	ENST00000317037.3	1333	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAATATGTCAATTTTC	5808906	True	NA	NA	False	AATAAA	-44	NA	5808923	5821483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5809055_5820281
transcript_14660.known	chr11	-	3481	12	FSM	ENSG00000051009.11	ENST00000265978.8	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	36.9126733595042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232437	False	NA	-10	True	TATAAA	-14	NA	6234711	6211344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_14661.known	chr11	-	3364	12	FSM	ENSG00000051009.11	ENST00000449352.7	3364	12	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_4	31.3323955079158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232362	True	NA	-10	True	TATAAA	-14	NA	6234636	6211344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_14663.known	chr11	+	2019	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	10.1365674663566	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	6259038	True	NA	10	True	AATAAA	-21	NA	6259837	6272127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
transcript_14665.known	chr11	+	1734	4	FSM	ENSG00000110148.10	ENST00000532715.5	1734	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	42.2794933218878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCTCTCCTTCCTTA	6259006	True	NA	-55	True	NA	NA	NA	6259805	6272062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6260080_6270087_6270338_6270645_6270804_6271010
transcript_14667.known	chr11	-	1028	2	FSM	ENSG00000170955.10	ENST00000303927.4	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6317624	True	NA	-4	True	AATAAA	-17	NA	6320501	6318945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6319565_6320092
transcript_14668.known	chr11	+	2410	6	FSM	ENSG00000166311.10	ENST00000342245.9	2410	6	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	3.91918358845308	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTGTGACTGTCCC	6390149	True	NA	8	True	AATAAA	-21	NA	6390473	6394996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6390917_6391383_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_14670.known	chr11	-	2666	15	FSM	ENSG00000166313.20	ENST00000609360.6	2666	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	126.78601609622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6415674	True	NA	-32	True	AATAAA	-16	NA	6419094	6395124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_14671.known	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	TRUE	canonical	1	118	junction_5	63.2973633970464	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6415650	True	NA	-32	True	AATAAA	-16	NA	6419070	6395124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_14672.nic	chr11	-	1902	13	NIC	ENSG00000166313.20	novel	2666	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_12	108.366533374264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6415651	True	NA	-32	True	AATAAA	-16	NA	6419071	6395124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6418984
transcript_14674.known	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_11	11.1799702833769	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-6469491	False	4450	0	True	AATAAA	-15	NA	6473941	6448612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
transcript_14683.known	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_7	46.1917034692136	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	-6476862	True	NA	NA	False	NA	NA	NA	6481312	6475679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_14684.known	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_7	47.0440523035894	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-6476881	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_14686.known	chr11	-	1560	8	FSM	ENSG00000132254.13	ENST00000531037.5	1560	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	93.669632218772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAGCACTAGGAATAAA	-6476874	True	NA	NA	False	NA	NA	NA	6481324	6476553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478858_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_14700.known	chr11	+	608	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	264.373893483369	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGTGGTTGTCTT	6475831	True	NA	NA	False	AGTAAA	-12	NA	6481507	6483058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
transcript_14701.known	chr11	+	2788	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	44.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	6475824	True	NA	24	True	AATAAA	-17	NA	6481500	6484681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6481556_6481756_6481853_6482044
transcript_14702.known	chr11	-	6559	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	9.3407708461347	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGTATAATATATAATA	-6603575	False	14814	NA	False	AATAAA	-18	NA	6603616	6595071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
transcript_14703.nic	chr11	-	1801	7	Fusion	ENSG00000132275.11_ENSG00000254400.1	novel	6559	7	NA	NA	-41	0	multi-exon	FALSE	canonical	3	8	junction_6	35.7055862420559	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	-6603616	False	14814	-5	True	AATAAA	-19	NA	6603657	6599919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602265_6603403
transcript_14705.known	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	265.313598512318	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592031	True	NA	13	True	AATAAA	-15	NA	6603773	6610870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14709.known	chr11	+	1692	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	179.22539735081	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	6592015	True	NA	-24	True	NA	NA	NA	6603757	6610833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_1471.known	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_18	18.2730490336904	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-21342260	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
transcript_14714.known	chr11	-	3492	13	FSM	ENSG00000166340.18	ENST00000299427.12	3492	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	57.6793699880835	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGCCTCTCATTCGTT	-6618326	True	NA	-13	True	ATTAAA	-19	NA	6619422	6612767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_14719.known	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	185.932450188389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	6592001	True	NA	-22	True	NA	NA	NA	6603743	6610835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14720.known	chr11	+	1594	12	FSM	ENSG00000166333.14	ENST00000526711.5	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	395.824362084795	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	6591988	True	NA	17	True	AATAAA	-19	NA	6603730	6610874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14723.known	chr11	-	3640	12	FSM	ENSG00000166340.18	ENST00000643479.1	3640	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	60.1925285718067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-6618333	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_14725.known	chr11	-	3787	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	62.6932213241591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-6618333	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_14726.known	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_4	82.9559370991613	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-6597402	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
transcript_14729.known	chr11	-	464	4	FSM	ENSG00000166340.18	ENST00000528571.6	464	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	93.6174247788424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGGGCATTACAGTCT	-6618307	True	NA	NA	False	GGGGCT	-45	NA	6619403	6617207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6617429_6617625_6617777_6619195_6619268_6619383
transcript_1473.known	chr1	+	2133	14	FSM	ENSG00000142794.19	ENST00000454000.6	2133	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	26.0427504705437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGGAAGCCCAGTCATA	21438271	True	NA	NA	False	AATGAA	-11	NA	21440127	21483467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21440349_21444947_21445220_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_14730.known	chr11	-	1099	2	FSM	ENSG00000166340.18	ENST00000528657.2	1099	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGTGTGCATGGCAG	-6618333	True	NA	NA	False	NA	NA	NA	6619429	6618214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6619268_6619383
transcript_14731.known	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_5	80.3255771663512	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592073	True	NA	13	True	AATAAA	-15	NA	6603815	6610870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14732.known	chr11	-	2305	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	26.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTACATGAATCC	-6673090	True	NA	NA	False	NA	NA	NA	6683340	6680384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6682403_6682746_6682816_6683122
transcript_14734.known	chr11	-	448	2	FSM	ENSG00000158042.9	ENST00000532203.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCACACAGCTCAAACAC	-6673066	True	NA	NA	False	NA	NA	NA	6683316	6682148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6682403_6683122
transcript_14736.known	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	-6673046	True	NA	-49	True	AATAGA	-4	NA	6683296	6681950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6682403_6682746
transcript_14737.known	chr11	+	1503	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	29.357055960942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	6924688	True	NA	NA	False	NA	NA	NA	6926422	6984238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
transcript_14741.known	chr11	+	3655	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	9.14087280053473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	6924691	True	NA	9	True	ATTAAA	-16	NA	6926425	6958047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_14751.known	chr11	+	1602	6	FSM	ENSG00000149054.16	ENST00000527171.5	1602	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	32.5699247773156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCTATGAATGTTATCA	NA	False	NA	NA	False	AAAAAG	-14	NA	6926403	6956105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943545_6943642_6955689
transcript_14755.known	chr11	-	556	4	FSM	ENSG00000149050.10	ENST00000531083.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCAGAACTATGGGGAA	-7019803	True	NA	NA	False	NA	NA	NA	7020314	7001447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7001556_7002708_7002852_7019682_7019746_7020072
transcript_14757.known	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	-7019835	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7001556_7002708_7002856_7020072
transcript_14758.known	chr11	-	538	3	FSM	ENSG00000149050.10	ENST00000525017.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCTCCTCATTATTC	-7019831	True	NA	NA	False	ATTAAA	-20	NA	7020342	7015819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7016025_7019682_7019746_7020072
transcript_14759.known	chr11	+	1452	5	FSM	ENSG00000149054.16	ENST00000529755.1	1452	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	38.1182371050918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAATGTTATCAATGTG	6924728	True	NA	NA	False	AAAAAG	-19	NA	6926462	6956110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6955689
transcript_14760.known	chr11	+	3328	24	FSM	ENSG00000166387.14	ENST00000299492.9	3328	24	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_11	7.35129838203438	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	7513575	True	NA	14	True	AATAAA	-20	NA	7513998	7653756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_14763.known	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	84.0680527905815	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670234	False	3266	-7	True	AATAAA	-16	NA	7673500	7665103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_14765.nic	chr11	-	1306	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_8	60.4823062969659	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670984	True	NA	-7	True	AATAAA	-16	NA	7674250	7665103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_14766.nic	chr11	-	1451	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	-266	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_8	57.9254639601618	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	NA	False	NA	-7	True	AATAAA	-16	NA	7674509	7665103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
transcript_1477.nnic	chr1	+	1065	3	NNC	ENSG00000142794.19	novel	3767	15	NA	NA	0	1130	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	49.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTGCTTCTGTCTGTT	21438280	True	NA	NA	False	ATTAAA	-12	NA	21440136	21455436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_21440349_21444947_21445220_21454855
transcript_14777.known	chr11	+	7055	9	FSM	ENSG00000175390.15	ENST00000677121.1	7055	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	919.462886689833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	7944180	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994102_7994238_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_14778.known	chr11	+	6920	8	FSM	ENSG00000175390.15	ENST00000651655.1	6920	8	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_2	87.7282445849635	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	7944180	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_14779.known	chr11	+	4308	8	FSM	ENSG00000175390.15	ENST00000678132.1	4308	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	742.242630444371	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACGCACCTG	7944187	True	NA	NA	False	AATACA	-12	NA	7987343	7999127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7987717_7991780_7991972_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_1478.known	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_5	55.5584719161074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	21498924	True	NA	22	True	AATAAA	-23	NA	21509422	21578410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_14780.known	chr11	+	844	8	FSM	ENSG00000175390.15	ENST00000531329.6	844	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	741.465895014321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCATCTTATGTGAG	7944183	True	NA	-5	True	AATAAA	-21	NA	7987339	7996167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7987374_7991825_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_14783.known	chr11	+	1784	7	FSM	ENSG00000175390.15	ENST00000531572.2	1784	7	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_2	83.3001600638718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAACGGAGCCTACCT	7944180	True	NA	-33	True	NA	NA	NA	7987336	7996139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253
transcript_14787.known	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	14.2407864951343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
transcript_14788.nic	chr11	-	779	3	ISM	ENSG00000166405.15	ENST00000528463.5	1211	7	-40	28982	-5	-593	5prime_fragment	FALSE	canonical	3	36	junction_2	1	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAACATCTT	-8167133	True	NA	NA	False	NA	NA	NA	8169048	8139646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_8140194_8153374_8153424_8168865
transcript_14789.known	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8167110	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8140194_8168865
transcript_14790.known	chr11	-	1294	4	FSM	ENSG00000166407.14	ENST00000335790.8	1294	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACTCTGCGTTGTTCAC	NA	False	NA	NA	False	ATTAAA	-20	NA	8263878	8224308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8263337
transcript_14794.nnic	chr11	-	2556	14	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_12	21.3699451616755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-8592898	True	NA	-7	True	AATAAA	-19	NA	8594259	8391870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8477249_8477284_8594082
transcript_14798.nnic	chr11	-	2517	13	NIC	ENSG00000130413.16	novel	2558	13	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_12	17.4547032821147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-8592893	True	NA	-7	True	AATAAA	-19	NA	8594254	8391870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_148.known	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_4	3929.46167897146	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_14800.nnic	chr11	-	2345	13	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	5	144	combination_of_known_splicesites	FALSE	canonical	3	20	junction_12	17.4547032821147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTTCAGTCATTCAC	-8592893	True	NA	NA	False	AATAAA	-22	NA	8594254	8392042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_14804.known	chr11	-	1991	11	FSM	ENSG00000130413.16	ENST00000358872.7	1991	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.6375729324136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-8592867	True	NA	-7	True	AATAAA	-19	NA	8594228	8391870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8594082
transcript_14811.known	chr11	-	769	5	FSM	ENSG00000166444.19	ENST00000532162.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	10.4253297309965	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAATATGGCAAATAT	-8698101	True	NA	NA	False	NA	NA	NA	8699020	8693888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932
transcript_14817.known	chr11	+	651	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2907.68662341732	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	8497299	True	NA	26	True	ATTAAA	-14	NA	8682791	8685845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
transcript_14819.known	chr11	+	558	5	FSM	ENSG00000166441.13	ENST00000524496.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2913.94329045711	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	8497296	True	NA	28	True	ATTAAA	-16	NA	8682788	8685847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8683960_8684082_8684717_8684893_8685677
transcript_1482.known	chr1	+	2131	11	FSM	ENSG00000162551.14	ENST00000540617.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	225.08018571167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGTCCCAGGAAGC	21498929	True	NA	NA	False	NA	NA	NA	21509427	21578175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_14821.known	chr11	+	4535	5	FSM	ENSG00000166441.13	ENST00000314138.11	4535	5	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	1400.79093729221	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTAATCCCACTTA	8497299	True	NA	NA	False	NA	NA	NA	8682791	8689872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677
transcript_14823.known	chr11	+	406	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	2909.52354346893	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497299	True	NA	29	True	ATTAAA	-17	NA	8682791	8685848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
transcript_14825.known	chr11	+	867	4	FSM	ENSG00000166441.13	ENST00000531978.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	1608.78055958197	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGAGGAGGCTTATGC	8497295	True	NA	NA	False	NA	NA	NA	8682787	8685415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717
transcript_14832.known	chr11	+	577	3	FSM	ENSG00000166441.13	ENST00000530585.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	1726.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGTGGTTTATCCT	8497295	True	NA	NA	False	NA	NA	NA	8682787	8684489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005
transcript_14835.known	chr11	+	607	2	FSM	ENSG00000166441.13	ENST00000529227.5	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCCTGCCTCAGCCT	8497295	True	NA	NA	False	NA	NA	NA	8682787	8683779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201
transcript_14836.known	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3764	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	8682711	True	NA	28	True	ATTAAA	-16	NA	8683214	8685847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8683266_8684005_8684082_8685677
transcript_14838.known	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	68.6964336774479	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	8907739	True	NA	NA	False	AATAAA	-17	NA	8911188	8920079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_14843.known	chr11	+	1232	5	FSM	ENSG00000166452.12	ENST00000309357.8	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	41.5391381711272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	8911134	False	NA	NA	False	AATAAA	-22	NA	8911153	8920084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8919336
transcript_14844.known	chr11	+	1247	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	72.7233628210357	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	8911119	False	NA	NA	False	AATAAA	-22	NA	8911138	8920084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
transcript_1485.known	chr1	+	2241	10	FSM	ENSG00000162551.14	ENST00000539907.5	2241	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	319.969713072895	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCGAGGACAGAGCTGA	21498927	True	NA	11	True	AATAAA	-12	NA	21509425	21578399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21509518_21560625_21560746_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_14850.known	chr11	+	1022	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	57.0438427878066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCTCGTGATCCACC	8911411	False	NA	NA	False	NA	NA	NA	8911442	8919862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_14854.known	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	47.6188571424762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	8907888	True	NA	NA	False	NA	NA	NA	8911337	8919900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
transcript_14858.known	chr11	+	513	3	FSM	ENSG00000166452.12	ENST00000529942.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	55.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTCTCTTAATAGCT	8911433	False	NA	6	True	AATAAA	-7	NA	8911464	8919537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8914825_8914931_8919336
transcript_14860.known	chr11	+	576	4	FSM	ENSG00000166452.12	ENST00000534506.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	70.1442957211933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAGATTTTGGTTCAGT	8907749	True	NA	NA	False	NA	NA	NA	8911198	8917504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286
transcript_14861.known	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	17.9495821678389	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-8962780	True	NA	83	True	TATAAA	-17	NA	8964442	8947201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
transcript_14862.known	chr11	-	1433	5	FSM	ENSG00000175348.11	ENST00000525069.5	1433	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	70.1511760414606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCTGGATTGATAATAT	NA	False	NA	3	True	AATAAA	-23	NA	8965011	8947500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964889
transcript_14866.known	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.3136337176714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-8962779	True	NA	-9	True	AATAAA	-19	NA	8964441	8947293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
transcript_14869.nic	chr11	+	1238	2	FSM	ENSG00000254860.7	ENST00000689197.1	1246	2	8	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTTGTTTTTTGACCT	8964053	True	NA	NA	False	AATAAA	-17	NA	8964509	8966502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8965149_8965903
transcript_14870.known	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.62476052848859	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	-9003610	True	NA	-3	True	AATAAA	-19	NA	9004001	8980575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
transcript_14873.known	chr11	-	1440	8	FSM	ENSG00000166471.11	ENST00000611268.4	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	91.5561609737155	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTTGGGATTT	-9307613	True	NA	-7	True	AATAAA	-18	NA	9314567	9280656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_14877.known	chr11	-	3798	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	22.4158921799294	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-9307639	True	NA	-4	True	AATAAA	-21	NA	9314593	9280653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_1488.known	chr1	+	2256	7	FSM	ENSG00000070831.17	ENST00000344548.7	2256	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	248.737981284189	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGAGGGTTGTTAT	22009300	True	NA	16	True	ATTAAA	-21	NA	22052667	22092946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22052743_22074093_22074220_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_14880.known	chr11	-	723	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTGCTGAACTAATT	-9307679	True	NA	NA	False	ATTAAA	-40	NA	9314633	9295095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9295388_9299583_9299702_9314320
transcript_14883.known	chr11	+	6162	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	69.627269063365	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9374682	True	NA	13	True	AATAAA	-22	NA	9384651	9448127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
transcript_14890.known	chr11	+	2900	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	22.1305219097969	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456772	True	NA	20	True	AATACA	-19	NA	9461011	9528524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_14894.known	chr11	+	2022	16	FSM	ENSG00000166478.10	ENST00000530463.5	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	32.6187403530888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAGAACAATGGAGCAA	9456736	True	NA	NA	False	NA	NA	NA	9460975	9527613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_14905.known	chr11	-	1147	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGGATTACTGTTTTTTG	-9460686	False	NA	-2	True	AATAAA	-14	NA	9460702	9459555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9459600_9460700
transcript_14906.known	chr11	+	4884	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_11	44.1337186736733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	9657792	True	NA	50	True	AATAAA	-16	NA	9664076	9752993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_14911.known	chr11	+	3006	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_6	41.182520563948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACTTGGGAGGC	9657850	True	NA	NA	False	TTTAAA	-13	NA	9664134	9741953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
transcript_14914.known	chr11	+	3872	3	FSM	ENSG00000246273.8	ENST00000658574.1	3872	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGTTAAAAAAAG	9758055	True	NA	-19	True	NA	NA	NA	9758319	9811335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9758504_9780375_9780576_9807847
transcript_14915.known	chr11	+	1492	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_3	17.2819751957543	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	10301041	True	NA	34	True	AATAAA	-16	NA	10305072	10307397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
transcript_14916.known	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	20	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	10301041	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10305230_10305679_10306099_10306331
transcript_14917.known	chr11	+	1839	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	10301042	True	NA	-1	True	CATAAA	-12	NA	10305073	10307362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10305230_10305679
transcript_14918.nic	chr11	-	1212	7	NIC	ENSG00000110315.7	novel	4049	6	NA	NA	0	-2819	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	134.417777428765	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTACTAAAATTTGC	-10538501	True	NA	-47	True	AATAAA	-17	NA	10541230	10514741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10531826_10532016_10534015_10534206_10541121
transcript_14919.known	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	8.44748483277715	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	-10538458	True	NA	-12	True	ATTAAA	-16	NA	10541187	10511672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_14922.known	chr11	-	1374	5	FSM	ENSG00000110315.7	ENST00000528665.5	1374	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	8.87059749960509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGGTACTAGATAC	-10538461	True	NA	NA	False	NA	NA	NA	10541190	10518317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_14923.known	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_6	28.4696475800691	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	10746932	True	NA	17	True	AATAAA	-18	NA	10751245	10779746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
transcript_14927.known	chr11	-	4001	22	FSM	ENSG00000110321.19	ENST00000526148.6	4001	22	0	0	0	0	multi-exon	TRUE	canonical	1	31	junction_21	1397.76107658315	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTGGCTGTAAATG	-10807905	False	NA	-32	True	AATAAA	-20	NA	10807973	10797049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10807548
transcript_14928.known	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5403	junction_21	454.056356197306	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	-10736210	True	NA	-36	True	AATAAA	-16	NA	10808926	10797053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_1493.known	chr1	+	338	3	FSM	ENSG00000218510.9	ENST00000642072.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTACCCAATGAAATGAT	22024247	True	NA	NA	False	AATACA	-25	NA	22025521	22030374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025644_22027413_22027535_22030279
transcript_14931.nic	chr11	-	3664	21	NIC	ENSG00000110321.19	novel	3794	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_20	1398.23860624716	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	-10736207	True	NA	-36	True	AATAAA	-16	NA	10808923	10797053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10808704
transcript_14932.known	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_8	1237.18492857778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	-10808640	False	NA	-74	True	NA	NA	NA	10808708	10797169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_1494.known	chr1	+	771	3	FSM	ENSG00000218510.9	ENST00000420503.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGATGCAAGATCCA	22024236	True	NA	NA	False	NA	NA	NA	22025510	22030800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025640_22027413_22027535_22030279
transcript_14949.known	chr11	-	523	2	FSM	ENSG00000110321.19	ENST00000534246.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	5403	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTCCGAGTTCAGTC	-10736203	True	NA	NA	False	AATAAA	-23	NA	10808919	10807073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10807382_10808704
transcript_1495.known	chr1	+	929	2	FSM	ENSG00000218510.9	ENST00000434233.2	929	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTTTTTTTTTTTTTT	22025166	True	NA	-3	True	NA	NA	NA	22025187	22031023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025373_22030279
transcript_14950.known	chr11	+	1153	3	FSM	ENSG00000247271.8	ENST00000664276.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTTTTTTTTTGTTT	10858161	False	NA	21	True	AATAAA	-26	NA	10858178	10879278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10858367_10865260_10865328_10878380
transcript_14951.known	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857636	True	NA	15	True	AATAAA	-20	NA	10858216	10879272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10858352_10865260_10865328_10878380
transcript_14952.known	chr11	-	1512	3	FSM	ENSG00000236287.8	ENST00000526020.5	1512	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	62.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAAGTTATTTGTC	-10858761	True	NA	NA	False	AGTAAA	-19	NA	10858796	10854618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10855082_10856143_10856258_10857861
transcript_14954.known	chr11	-	2741	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	58	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATTATTGGTATTT	-10854842	True	NA	-1	True	TTTAAA	-5	NA	10858073	10852703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10855119_10856143_10856258_10857861
transcript_14957.known	chr11	+	1040	2	FSM	ENSG00000247271.8	ENST00000664153.2	1042	2	0	2	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857638	True	NA	15	True	AATAAA	-20	NA	10858218	10879272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10858367_10878380
transcript_14959.known	chr11	-	2503	11	FSM	ENSG00000110328.6	ENST00000227756.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.83438085832593	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTGCAGTCATTTGGT	-11621400	True	NA	-13	True	AATAAA	-16	NA	11622005	11270876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_11271291_11293028_11293194_11327085_11327182_11332693_11332832_11340818_11341005_11372514_11372630_11377181_11377380_11379080_11379265_11432620_11432788_11448743_11448937_11621358
transcript_1496.known	chr1	+	1077	2	FSM	ENSG00000218510.9	ENST00000416769.2	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024236	True	NA	NA	False	AATAAA	-1	NA	22025510	22031223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025644_22030279
transcript_14964.known	chr11	+	8627	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	6.94422221866655	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTTTCTCTCCCAT	12375659	True	NA	NA	False	ATTAAA	-45	NA	12377570	12535356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
transcript_14965.nnic	chr11	-	2099	3	NNC	ENSG00000254670.1	novel	670	2	NA	NA	-32	5400	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGCTTGACTCTGCAC	-13009097	True	NA	NA	False	AATAAA	-18	NA	13009191	12995689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_12997087_13001089_13001227_13008626
transcript_14969.known	chr11	-	2439	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	44.2632395447961	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCACATTGACCAG	-13460671	True	NA	-11	True	AATAAA	-30	NA	13463222	13388007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
transcript_1497.known	chr1	+	1388	2	FSM	ENSG00000218510.9	ENST00000634712.2	1388	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTGCTGTGGTGAT	22024223	True	NA	NA	False	ATTAAA	-14	NA	22025497	22031219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025946_22030279
transcript_14970.known	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	29.7822026021706	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-13460746	True	NA	NA	False	NA	NA	NA	13463297	13388701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
transcript_14972.known	chr11	+	5266	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_3	22.7396330025555	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	13660803	True	NA	19	True	ATTAAA	-22	NA	13668667	13732346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
transcript_1498.known	chr1	+	1435	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	213.251400933265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGAAGCTTTATTC	22009341	True	NA	NA	False	ATTAAA	-23	NA	22052708	22090807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
transcript_14986.nnic	chr11	-	1986	6	NNC	ENSG00000133818.14	novel	2343	6	NA	NA	1271	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_5	370.751129465576	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-14340810	False	2105	-14	True	ATTAAA	-19	NA	14340823	14277921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14340759
transcript_14987.nnic	chr11	-	1984	6	NNC	ENSG00000133818.14	novel	2343	6	NA	NA	1212	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	383.701759182832	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-14340869	False	NA	-14	True	ATTAAA	-19	NA	14340882	14277921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14340820
transcript_14988.known	chr11	-	732	6	FSM	ENSG00000133818.14	ENST00000531807.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	321.489906528961	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAGAACCAACACGGAA	-14339989	True	NA	NA	False	NA	NA	NA	14342094	14279396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
transcript_14989.known	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_5	129.593827013481	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-14348519	True	NA	-14	True	ATTAAA	-19	NA	14359183	14277921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
transcript_1499.known	chr1	+	1518	3	FSM	ENSG00000218510.9	ENST00000634934.2	1518	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024218	True	NA	NA	False	AATAAA	-1	NA	22025492	22031223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025946_22027413_22027535_22030279
transcript_14990.nnic	chr11	-	1158	6	NNC	ENSG00000133818.14	novel	2343	6	NA	NA	1271	-68	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_5	370.751129465576	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTTACTACTCCTAC	-14340810	False	2105	-37	True	ATTAAA	-15	NA	14340823	14278749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14340759
transcript_15.known	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00042_+_0_1000
transcript_1500.known	chr1	+	11035	16	FSM	ENSG00000133216.17	ENST00000374630.8	11035	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	8.15570693168628	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGGACTCAGTATTTA	22708732	True	NA	13	True	AATAAA	-19	NA	22710838	22921500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22711044_22781420_22781486_22784391_22785077_22863036_22863193_22864876_22865213_22882358_22882484_22892883_22893047_22895471_22895581_22896413_22896479_22905986_22906110_22906709_22906958_22907952_22908169_22909021_22909172_22910381_22910576_22912443_22912600_22913461
transcript_15004.known	chr11	-	1266	11	FSM	ENSG00000129084.18	ENST00000418988.2	1266	11	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_9	584.707482421766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGAGTTTTTTCCAA	-14643395	True	NA	NA	False	NA	NA	NA	14643617	14505063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14610965_14611152_14643454
transcript_1501.known	chr1	+	3085	21	FSM	ENSG00000004487.18	ENST00000400181.9	3085	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	984.647615901242	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	22987800	True	NA	17	True	AATAAA	-17	NA	23019467	23083689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23066059_23066072_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_15011.known	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	448.646634300466	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	-14505076	True	NA	-38	True	NA	NA	NA	14520363	14504912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
transcript_15012.nic	chr11	-	1285	10	NIC	ENSG00000129084.18	novel	1195	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	41	junction_9	456.311540750639	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-14505085	True	NA	-1	True	AATAAA	-20	NA	14520372	14504875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520192
transcript_15013.known	chr11	-	1195	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_9	123.648645986606	2370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-14505099	True	NA	-1	True	AATAAA	-20	NA	14520386	14504875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_1503.known	chr1	+	3033	19	FSM	ENSG00000004487.18	ENST00000356634.7	3033	19	0	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_2	315.200333121651	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	22987780	True	NA	17	True	AATAAA	-17	NA	23019447	23083689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_15036.known	chr11	-	479	2	FSM	ENSG00000129084.18	ENST00000528018.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGCTAGAAAACAAAAAGAG	-14643413	True	NA	NA	False	AAAACA	-36	NA	14643635	14610853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14611152_14643454
transcript_15038.nic	chr11	-	3486	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_21	127.302004907679	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492154	True	NA	-14	True	AATAAA	-17	NA	14499857	14457511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499602
transcript_15039.known	chr11	-	3481	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_21	128.201478336324	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	-14492149	True	NA	-8	True	AATAAA	-23	NA	14499852	14457505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
transcript_15040.known	chr11	-	3336	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_21	76.4133347814784	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492108	True	NA	-14	True	AATAAA	-17	NA	14499811	14457511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_15041.nic	chr11	-	3355	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_21	113.640819372549	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492162	True	NA	-14	True	AATAAA	-17	NA	14499865	14457511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_1505.known	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	29.6797723860694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	-23163217	True	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
transcript_15054.known	chr11	-	1668	5	FSM	ENSG00000186104.11	ENST00000534686.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	32.3612422505688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891091	True	NA	NA	False	AATAAA	-24	NA	14891662	14878008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891152
transcript_15057.nic	chr11	-	3224	5	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	-30	0	intron_retention	FALSE	canonical	3	22	junction_4	25.2438111227287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	14892261	14878008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431
transcript_15058.known	chr11	-	1882	5	FSM	ENSG00000186104.11	ENST00000530609.5	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.2001773044071	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891069	True	NA	NA	False	AATAAA	-24	NA	14891640	14878008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891152
transcript_15059.nnic	chr11	-	1438	5	NNC	ENSG00000186104.11	novel	1882	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	31.6494470725793	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891100	True	NA	NA	False	AATAAA	-24	NA	14891671	14878008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891627
transcript_15060.known	chr11	-	2214	5	FSM	ENSG00000186104.11	ENST00000334636.10	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	28.9568644711405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGCTATTGAATCTTT	-14892008	True	NA	NA	False	AATATA	-18	NA	14892231	14877439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891980
transcript_15066.known	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	6.04152298679729	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	15073209	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
transcript_15067.known	chr11	+	2097	5	FSM	ENSG00000175868.14	ENST00000533448.1	2097	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	38.1534729742916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTATTCTGTGACCTT	15073178	True	NA	NA	False	AATACA	-16	NA	15073561	15082342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15080765
transcript_15068.known	chr11	-	840	4	FSM	ENSG00000110680.13	ENST00000331587.9	840	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGAGCTGTGGTGGTCA	-14972323	True	NA	NA	False	AATAAA	-17	NA	14972351	14968500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14968998_14969934_14970076_14971106_14971202_14972244
transcript_15083.known	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2316	junction_2	137.175981862715	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	16699495	True	NA	7	True	AGTAAA	-17	NA	16738646	16758340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
transcript_15092.known	chr11	+	575	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	1219.44768918829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAATGATGTTTGTTA	16699506	True	NA	NA	False	AAAAAG	-14	NA	16738657	16755067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
transcript_15095.known	chr11	+	762	3	FSM	ENSG00000110696.10	ENST00000525256.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2316	junction_2	117.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCCTGGTGTGGTG	16699507	True	NA	NA	False	ACTAAA	-16	NA	16738658	16748591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_16738842_16744600_16744685_16748096
transcript_15097.known	chr11	-	321	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	-16968304	False	NA	-67	True	NA	NA	NA	16975013	16974692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_16974700_16975000
transcript_15098.known	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	17013762	True	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17014368_17052031
transcript_15106.known	chr11	-	491	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	6218.06489512614	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	-16938685	True	NA	31	True	AATAAA	-19	NA	17077666	17074388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
transcript_1511.nic	chr1	-	924	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8952	9624	-11	-211	internal_fragment	FALSE	canonical	3	57	junction_2	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAAAATGAGAAAT	-23163228	True	NA	18	True	AATGAA	-3	NA	23168856	23093653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_15113.known	chr11	-	561	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	6576.52207173366	34722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	-16938725	True	NA	31	True	AATAAA	-19	NA	17077706	17074388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
transcript_15126.known	chr11	-	664	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	12545	junction_1	2033.15596733256	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	-16938687	True	NA	27	True	AATAAA	-15	NA	17077668	17074392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
transcript_15128.nic	chr11	-	1808	5	ISM	ENSG00000011405.14	ENST00000533645.1	2101	6	-45	7195	-6	-7195	5prime_fragment	FALSE	canonical	3	232	junction_2	29.4310635213884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTAAGATGTCATGT	-17193651	True	NA	NA	False	AATAAA	-17	NA	17207992	17148516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
transcript_15130.known	chr11	-	584	3	FSM	ENSG00000011405.14	ENST00000532035.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTTTAGACCTACTAT	-17193609	True	NA	NA	False	NA	NA	NA	17207950	17169351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17169807_17194388_17194415_17207847
transcript_15135.nic	chr11	+	1731	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-27	1	combination_of_known_junctions	TRUE	canonical	3	23	junction_3	61.3966694569678	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275041	True	NA	NA	False	AATAAA	-14	NA	17276703	17331523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17276829_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15140.known	chr11	+	2300	14	FSM	ENSG00000070081.18	ENST00000529010.6	2300	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_7	20.0263140502158	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGGGAAGGCAAGAAA	17275076	True	NA	NA	False	NA	NA	NA	17276738	17332211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15141.nic	chr11	+	1657	14	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	49.6489451195017	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275051	True	NA	NA	False	AATAAA	-14	NA	17276713	17331523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17276849_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15142.nic	chr11	+	1625	14	NIC	ENSG00000070081.18	novel	937	8	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	54.074679896576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17276982	False	NA	NA	False	AATAAA	-14	NA	17276992	17331523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17277096_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15144.known	chr11	+	1905	13	FSM	ENSG00000070081.18	ENST00000323688.10	1905	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_7	20.8424979842202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTTTTTTCCAACA	17275078	True	NA	NA	False	AATAAA	-24	NA	17276740	17331390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901
transcript_15145.nic	chr11	+	1557	13	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	50.4419358162322	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275041	True	NA	NA	False	AATAAA	-14	NA	17276703	17331523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17330126_17330298_17330901_17330984_17331411
transcript_15152.known	chr11	-	2232	21	FSM	ENSG00000006611.17	ENST00000318024.9	2232	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2.87880183409696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATAGGAGTGAGTGTGG	-17544245	True	NA	-4	True	AATAAA	-17	NA	17544416	17493899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17517400_17517475_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_15153.known	chr11	-	2149	20	FSM	ENSG00000006611.17	ENST00000526313.5	2149	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2.77902711209349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTGAGTGTGGATTTG	-17544231	True	NA	1	True	AATAAA	-22	NA	17544402	17493894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_1516.known	chr1	-	2691	11	FSM	ENSG00000125944.21	ENST00000374616.7	2691	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	538.40635211706	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	-23319147	True	NA	-14	True	AATAAA	-26	NA	23344310	23309782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_15165.nic	chr11	-	1526	12	NIC	ENSG00000129158.11	novel	1525	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	52.4802993339579	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011038	True	NA	-10	True	AATAAA	-20	NA	18012953	17788047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
transcript_15167.nic	chr11	-	1460	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	41.0945251828026	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011041	True	NA	-10	True	AATAAA	-20	NA	18012956	17788047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_15168.known	chr11	-	1451	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	34.0360103419893	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011132	True	NA	-10	True	AATAAA	-20	NA	18013047	17788047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_1517.known	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_10	387.929323459828	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-23319159	True	NA	-17	True	AATAAA	-23	NA	23344322	23309785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_15173.nic	chr11	-	1359	11	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	57.7131700740827	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011038	True	NA	-10	True	AATAAA	-20	NA	18012953	17788047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
transcript_15178.nic	chr11	-	1293	10	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	47.3523696722798	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011041	True	NA	-10	True	AATAAA	-20	NA	18012956	17788047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_15179.known	chr11	-	1264	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	40.6988336654553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCCAGAGAATTGTT	-18011113	True	NA	-11	True	AATAAA	-19	NA	18013028	17788048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_15195.known	chr11	-	1503	12	FSM	ENSG00000166788.10	ENST00000529318.5	1503	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.209217952048	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAAACTTTATTTTT	-18100393	True	NA	-34	True	NA	NA	NA	18106087	18080372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086856_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_152.known	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2722	junction_10	3161.7140914532	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_1520.known	chr1	-	7646	10	FSM	ENSG00000125944.21	ENST00000478691.5	7646	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	495.827354461307	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTTGG	-23319173	True	NA	0	True	AATAAA	-18	NA	23344336	23304687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
transcript_15204.nic	chr11	-	1353	11	NIC	ENSG00000166788.10	novel	1518	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	171.178298858237	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAATTGACTTATTGG	-18100417	False	NA	-5	True	AATAAA	-20	NA	18106111	18080343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_15206.known	chr11	-	451	5	FSM	ENSG00000166788.10	ENST00000532452.5	451	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	257.00328305296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAGTTGAAATTGACTT	-18100325	True	NA	-10	True	AATAAA	-15	NA	18106019	18080348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18080492_18081410_18081504_18083534_18083547_18103256_18103347_18105906
transcript_15209.known	chr11	-	471	2	FSM	ENSG00000166788.10	ENST00000530237.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTTGAAATTGACTTA	-18081725	False	NA	-9	True	AATAAA	-16	NA	18081737	18080347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18080492_18081410
transcript_15210.known	chr11	-	4840	23	FSM	ENSG00000110756.18	ENST00000349215.8	4840	23	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_22	21.0403488799909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAACTCTTTTTTGCA	-18320488	True	NA	2	True	AGTAAA	-18	NA	18322140	18278675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
transcript_15213.nic	chr11	-	2088	15	NIC	ENSG00000110756.18	novel	4725	22	NA	NA	3	-3914	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	21.3600093632938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTCTTTAGGCAATGAA	-18320543	True	NA	21	True	AAAAAG	-35	NA	18322195	18291804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322076
transcript_15217.known	chr11	+	3012	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	18.61437342376	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	18319860	True	NA	33	True	AGTAAA	-30	NA	18322566	18367045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_15220.nic	chr11	+	2294	11	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-3	7492	-3	4447	5prime_fragment	FALSE	canonical	3	107	junction_9	19.4177753617658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGCTTGAAAACCTTCA	18319847	True	NA	NA	False	AATAAA	-17	NA	18322553	18353278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328
transcript_15222.nic	chr11	+	1865	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-287	12525	-25	-586	5prime_fragment	FALSE	canonical	3	112	junction_5	19.1143761342085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACAGAAAAACCGAAGT	18321989	True	NA	NA	False	AATAAA	-22	NA	18322269	18348245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_15224.nic	chr11	+	2155	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	9	11939	-1	0	5prime_fragment	FALSE	canonical	3	112	junction_5	19.1143761342085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTCTTTCATTTA	18319859	True	NA	4	True	AATAAA	-15	NA	18322565	18348831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_15225.nic	chr11	+	1210	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	10	18979	0	-167	5prime_fragment	FALSE	canonical	3	112	junction_5	18.2642638322308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCCTGTGTGAGTTG	18319860	True	NA	NA	False	ATTAAA	-16	NA	18322566	18341791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_15226.nic	chr11	+	1677	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-287	18809	-25	3	5prime_fragment	FALSE	canonical	3	112	junction_5	18.2642638322308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTGATTGCTTACTA	18321989	True	NA	NA	False	AATAAA	-17	NA	18322269	18341961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_15227.nic	chr11	+	765	4	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-4	22447	-4	2419	5prime_fragment	FALSE	canonical	3	127	junction_1	16.3571255285137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTCTTAAGACCATTA	18319846	True	NA	NA	False	AATAAA	-15	NA	18322552	18338323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108
transcript_15228.known	chr11	+	568	2	FSM	ENSG00000110768.12	ENST00000526461.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACACACTTTAAGAGTTG	18319861	True	NA	NA	False	NA	NA	NA	18322567	18333454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18322741_18333059
transcript_15232.known	chr11	+	2241	8	FSM	ENSG00000134333.14	ENST00000422447.8	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	7252	junction_1	852.383453042355	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCCTGAAAACCATAC	18286635	True	NA	NA	False	AATACA	-14	NA	18394562	18408425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15236.known	chr11	+	1922	8	FSM	ENSG00000134333.14	ENST00000379412.9	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	3154.34847246056	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGGTTAATTCATTA	18396208	False	NA	20	True	AATAAA	-14	NA	18396277	18407847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15238.known	chr11	+	1887	7	FSM	ENSG00000134333.14	ENST00000227157.8	1887	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	3156.15831880046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCTCATGCCTATA	18286658	True	NA	6	True	ATTAAA	-19	NA	18394585	18408218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18407116
transcript_15241.known	chr11	+	1310	7	FSM	ENSG00000134333.14	ENST00000430553.6	1310	7	0	0	0	0	multi-exon	FALSE	canonical	2	226	junction_3	3322.51187189585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCAGTGTATAAATCCA	18286634	True	NA	-18	True	NA	NA	NA	18394561	18407667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15242.known	chr11	+	1340	7	FSM	ENSG00000134333.14	ENST00000545215.5	1340	7	0	0	0	0	multi-exon	FALSE	canonical	1	127	junction_2	3285.18699366312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCCCAGTGAGTCACA	18286635	True	NA	-43	True	NA	NA	NA	18394562	18407642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15245.known	chr11	+	1092	7	FSM	ENSG00000166796.12	ENST00000396215.7	1092	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	18412304	True	NA	NA	False	AATAAA	-18	NA	18412322	18451243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_15251.nic	chr11	-	1576	11	NIC	ENSG00000074319.13	novel	1534	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	257.882318122046	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-18515566	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18525660_18525703_18526774
transcript_15256.known	chr11	-	1534	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_6	31.5211079582171	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-18515566	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_15258.nic	chr11	-	1441	9	NIC	ENSG00000074319.13	novel	1534	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	212.701522091404	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-18515558	True	NA	-15	True	AATAAA	-14	NA	18526934	18480310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18526774
transcript_15266.known	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	12.6810850227956	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	-18587701	True	NA	-1	True	AATAAA	-16	NA	18588734	18529608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_15270.known	chr11	-	1848	11	FSM	ENSG00000151116.17	ENST00000379387.8	1848	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	14.277604841149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTAATGTTTCTTGTG	-18587673	True	NA	NA	False	NA	NA	NA	18588706	18531873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_15271.known	chr11	-	1354	11	FSM	ENSG00000151116.17	ENST00000396196.6	1354	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	16.3033738839542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGTCATTTAATTTT	-18587684	True	NA	NA	False	NA	NA	NA	18588717	18532280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18575346_18575413_18578723_18578809_18588612
transcript_15274.known	chr11	-	2503	11	FSM	ENSG00000151116.17	ENST00000543987.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	15.2052622469986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTATTAAGGGGCACTT	-18587713	True	NA	NA	False	TATAAA	-31	NA	18588746	18531200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_15277.known	chr11	-	1799	10	FSM	ENSG00000151116.17	ENST00000320750.10	1799	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	16.6740724287147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTTACATGCACTTTA	-18587653	True	NA	-81	True	NA	NA	NA	18588686	18531778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_1528.known	chr1	-	1837	9	FSM	ENSG00000125944.21	ENST00000606561.5	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	471.869536392211	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGAAGAAATCACTATT	-23319132	True	NA	NA	False	NA	NA	NA	23344295	23310332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23337753_23337862_23338489_23338609_23344210
transcript_15280.known	chr11	-	995	7	FSM	ENSG00000151116.17	ENST00000300038.7	995	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.1797859605175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTTTTCTCATCTG	-18587648	True	NA	NA	False	AATAAA	-21	NA	18588681	18563645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18564002_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_15283.known	chr11	-	5601	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	9.17387595294377	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTGGTTTGCATT	-18632507	True	NA	-7	True	ATTAAA	-14	NA	18634342	18606402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
transcript_15288.nnic	chr11	+	398	3	NIC	ENSG00000247595.5	novel	493	4	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	18588340	True	NA	33	True	CATAAA	-15	NA	18588747	18603883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_18588996_18603157_18603196_18603771
transcript_15289.known	chr11	-	2167	4	FSM	ENSG00000179119.15	ENST00000536336.5	2167	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	11.0252236056942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCACTAAATATTTTAT	-18632554	True	NA	NA	False	AATAAA	-9	NA	18634389	18612164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18612489_18614562_18616099_18616874_18616990_18634197
transcript_15292.known	chr11	+	3607	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGGTAGCTTACTA	18698703	True	NA	NA	False	TATAAA	-18	NA	18698778	18704785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18698908_18700932_18701198_18701572
transcript_15294.nnic	chr11	+	1464	3	NNC	ENSG00000254966.1	novel	874	3	NA	NA	-36	-31461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTCTCAGTGAACT	18706384	True	NA	25	True	ATTAAA	-14	NA	18706500	18709107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_18707150_18707277_18707394_18708408
transcript_15299.known	chr11	+	2406	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	52.4782320943646	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111273	True	NA	13	True	AATAAA	-16	NA	19117167	19176415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_15309.known	chr11	+	2283	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	69.9709145923425	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111250	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_15319.known	chr11	-	3706	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.1664215665072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240128	False	817	NA	False	ATTAAA	-17	NA	19240945	19224062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
transcript_15320.known	chr11	-	3519	13	FSM	ENSG00000129173.13	ENST00000620009.4	3519	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	18.0662361572323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAGCATTTTCATTTC	-19240803	True	NA	NA	False	ATTAAA	-14	NA	19241620	19224065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241406
transcript_15321.known	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	13.6775871003949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240803	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_15323.known	chr11	+	886	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	142.343247117663	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATGGTGCTCTGCA	20359605	True	NA	-90	True	NA	NA	NA	20363722	20383334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_15325.known	chr11	+	967	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	181.361076309113	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTATACATATAGATC	20359607	True	NA	-56	True	AAGAAA	-30	NA	20363724	20383368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_15329.known	chr11	+	1477	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	110.983602392426	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	20359625	True	NA	15	True	AATAAA	-26	NA	20363742	20383782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_15334.known	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	175	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	20359567	True	NA	-25	True	AGTAAA	-36	NA	20363684	20367625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363750_20364236_20364433_20367173
transcript_15336.known	chr11	+	774	2	FSM	ENSG00000109854.14	ENST00000532081.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTCTCACTTGAGTG	20363961	True	NA	5	True	AATAAA	-17	NA	20364140	20367655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20364433_20367173
transcript_15339.known	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	24.3826896702467	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	20386621	True	NA	74	True	AATAAA	-19	NA	20387715	20509338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_15342.known	chr11	+	2530	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	98.57787246018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	20387123	False	NA	30	True	AATAAA	-43	NA	20387557	20509294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_15343.known	chr11	+	895	1	FSM	ENSG00000148935.12	ENST00000648096.1	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGAACAAAATTTTAC	22625463	False	NA	NA	False	AATAAA	-23	NA	22625508	22626403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_22625500_22626400
transcript_15346.known	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	21.4527905462721	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	-22827976	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
transcript_15351.nic	chr11	-	303	3	ISM	ENSG00000198168.9	ENST00000354193.5	4479	4	-69	8318	-69	0	5prime_fragment	FALSE	canonical	3	190	junction_1	25	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTACATCCGGGCCCCCA	-22828045	True	NA	NA	False	AATAGA	-9	NA	22829870	22827244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_22827321_22827823_22827875_22829694
transcript_15353.known	chr11	-	6285	15	FSM	ENSG00000148942.15	ENST00000396005.8	6285	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	3.99744816560949	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATGGGTAGATTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	26722060	26667019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_26671252_26673401_26673530_26678711_26678816_26681054_26681222_26683756_26683844_26686476_26686545_26692488_26692602_26697163_26697253_26698405_26698536_26703530_26703672_26703792_26703948_26709311_26709380_26711306_26711359_26712640_26712707_26721375
transcript_15354.known	chr11	-	879	5	FSM	ENSG00000254560.6	ENST00000530430.1	879	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.41130192063036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTATGCTGGTCCATC	-27219900	True	NA	NA	False	NA	NA	NA	27220086	27063019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27219686
transcript_15356.nnic	chr11	-	908	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-3	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTGTCTGGCATATTG	-27219903	True	NA	NA	False	ATTAAA	-22	NA	27220089	27217033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27217481_27218658_27218717_27219686
transcript_15359.nnic	chr11	-	682	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-46	80	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	-27219973	True	NA	NA	False	ATTAAA	-15	NA	27220159	27217040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27217481_27219686_27219816_27220046
transcript_15360.known	chr11	-	745	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTCAGCAATTAAACT	-27219916	True	NA	NA	False	NA	NA	NA	27220102	27217151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27217481_27219686
transcript_15363.known	chr11	-	1452	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	28.7012194862866	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTGTTACTAG	-27359059	True	NA	-15	True	AATAAA	-20	NA	27363215	27338511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
transcript_15367.known	chr11	-	2109	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	6	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGCAGAACTCTTG	-27359078	True	NA	NA	False	AATAAA	-19	NA	27363234	27348868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27350440_27357402_27357542_27362835
transcript_15371.known	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	26.688012290165	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	-27490310	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
transcript_15377.known	chr11	+	2615	4	FSM	ENSG00000245573.9	ENST00000652172.1	2615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGCTATAAGTGCCTA	27506758	True	NA	NA	False	AATATA	-36	NA	27506852	27515347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_27506899_27507481_27507582_27511030_27511153_27513000
transcript_15380.known	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_1	691	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587646	True	NA	-30	True	AATAAA	-16	NA	27634522	27617625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27618024_27623949_27624146_27634330
transcript_15381.known	chr11	-	3985	2	FSM	ENSG00000176697.20	ENST00000356660.9	3985	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-27699220	True	NA	NA	False	CATAAA	-2	NA	27700455	27654892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27658586_27700163
transcript_15382.known	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	24.5531948023063	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-28105164	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
transcript_15386.known	chr11	+	4208	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	42.7450451969452	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	28107890	True	NA	19	True	AATAAA	-16	NA	28108387	28333507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
transcript_15387.known	chr11	+	795	5	FSM	ENSG00000169519.21	ENST00000403099.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	64.0019530951986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCAATGTTACAGGT	NA	False	NA	NA	False	NA	NA	NA	28108319	28125587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28123861_28123923_28125509
transcript_15392.known	chr11	+	2373	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	38.8186667582606	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	30318996	True	NA	8	True	AATAAA	-16	NA	30323103	30338223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
transcript_15398.nnic	chr11	+	470	3	NIC	ENSG00000152219.5	novel	2373	4	NA	NA	0	-1414	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	125	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGAGCCTTTAAAGGTC	30318996	True	NA	19	True	AATAAA	-27	NA	30323103	30336809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_30323203_30332865_30332994_30336566
transcript_154.known	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2069	junction_14	3513.9813329888	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_15411.known	chr11	-	795	7	FSM	ENSG00000148950.11	ENST00000278200.5	795	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	106.878045765567	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGTTGTTTTTAATT	-31506845	True	NA	-6	True	AATAAA	-14	NA	31509622	31432401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31473723_31473787_31509518
transcript_15421.known	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	88.6191852817436	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506845	True	NA	-5	True	AATAAA	-15	NA	31509622	31432400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_15427.known	chr11	+	2970	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	20.994046775217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	31367412	True	NA	7	True	AATAAA	-15	NA	31369859	31432835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
transcript_15433.nnic	chr11	-	625	5	NIC	ENSG00000148950.11	novel	733	6	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	114.770150736156	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506864	True	NA	-5	True	AATAAA	-15	NA	31509641	31432400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_31432569_31433459_31433571_31460625_31460715_31463171_31463306_31509518
transcript_15435.known	chr11	-	985	5	FSM	ENSG00000148950.11	ENST00000532624.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	40.0835065831322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGCTTTATCAGAAA	-31506828	True	NA	NA	False	NA	NA	NA	31509605	31452544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31453093_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_15442.nic	chr11	-	513	4	NIC	ENSG00000148950.11	novel	733	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	131.945274851188	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506848	True	NA	-5	True	AATAAA	-15	NA	31509625	31432400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31509518
transcript_15443.known	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	124.212184050787	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506797	True	NA	-5	True	AATAAA	-15	NA	31509574	31432400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
transcript_15445.nnic	chr11	-	505	4	NNC	ENSG00000148950.11	novel	733	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	143.787652073775	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506853	True	NA	-5	True	AATAAA	-15	NA	31509630	31432400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_31432569_31433459_31433571_31488127_31488242_31509518
transcript_15446.known	chr11	+	2745	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	4	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTGAATACCGTTA	31367392	True	NA	NA	False	AATAAA	-18	NA	31369839	31417338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31369913_31370715_31370860_31414810
transcript_15447.known	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	78.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	-31506868	True	NA	-97	True	NA	NA	NA	31509645	31432492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31509518
transcript_1545.nic	chr1	+	703	3	FSM	ENSG00000249087.8	ENST00000690463.1	706	3	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	23368858	True	NA	7	True	AATAAA	-23	NA	23368963	23371783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23369325_23371138_23371210_23371512
transcript_15450.known	chr11	-	735	2	FSM	ENSG00000148950.11	ENST00000532668.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATAGACACCTATATT	-31506831	True	NA	NA	False	AATAAA	-12	NA	31509608	31477114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31477760_31509518
transcript_15453.known	chr11	-	475	5	FSM	ENSG00000148950.11	ENST00000529749.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	51.8573765244637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACATTTCAATTAT	-31506826	True	NA	NA	False	TTTAAA	-13	NA	31509603	31456259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31456387_31460625_31460715_31463171_31463306_31469757_31469798_31509518
transcript_15457.known	chr11	+	8093	10	FSM	ENSG00000109911.19	ENST00000640961.2	8093	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.9881277995156	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTGTCACTTTTTATT	31507260	True	NA	NA	False	AATAAA	-16	NA	31509766	31790324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
transcript_15458.known	chr11	+	2456	2	FSM	ENSG00000109911.19	ENST00000638764.1	2456	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTAACCCATGTTCT	31507260	True	NA	NA	False	ATTAAA	-17	NA	31509766	31512584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31510008_31510369
transcript_1546.known	chr1	+	606	3	FSM	ENSG00000249087.8	ENST00000437367.4	898	3	286	6	12	0	multi-exon	FALSE	canonical	2	4	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	23369144	False	NA	7	True	AATAAA	-23	NA	23369249	23371783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23369514_23371138_23371210_23371512
transcript_15460.known	chr11	+	1392	10	FSM	ENSG00000109911.19	ENST00000640342.1	1392	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.0867275549046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAACCATAAACAAA	31507263	True	NA	NA	False	ATTAAA	-10	NA	31509769	31719703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603764_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31719472
transcript_15461.known	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	127.426841756358	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	32075687	True	NA	13	True	AATAAA	-18	NA	32091073	32105722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
transcript_15465.known	chr11	+	5047	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	0	0	0	multi-exon	FALSE	canonical	3	2368	junction_3	231.308646617458	2817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAATTCATTTA	32548735	True	NA	7	True	AATAAA	-20	NA	32583830	32606264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_1548.known	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4523	junction_1	107.5	2644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-23490266	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23558416_23558934_23559020_23559126
transcript_15500.known	chr11	+	1207	8	FSM	ENSG00000149100.13	ENST00000524896.5	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	911.795313586087	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTCCAACGTCTC	32548738	True	NA	NA	False	NA	NA	NA	32583833	32602823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_32583930_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_15509.known	chr11	+	1741	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_3	7.37288105152931	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	33015339	True	NA	14	True	AATAAA	-16	NA	33015877	33033582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
transcript_1551.known	chr1	+	823	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4775.44131573198	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	23576129	True	NA	55	True	AATAAA	-23	NA	23691820	23696425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_15512.known	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_15	100.97999801941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151142	True	NA	-5	True	AATAAA	-15	NA	33161480	33084583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_15518.known	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.82035593498169	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	33037733	True	NA	8	True	ATTAAA	-1	NA	33039571	33073550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_15519.nnic	chr11	-	1488	10	NNC	ENSG00000176102.13	novel	2812	21	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	165.23772623962	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151133	True	NA	-5	True	AATAAA	-15	NA	33161471	33084583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_33085290_33085712_33085774_33105576_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_15523.nnic	chr11	-	972	4	NNC	ENSG00000176102.13	novel	2812	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	212.822826678802	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151141	True	NA	-5	True	AATAAA	-15	NA	33161479	33084583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_33085290_33085712_33085774_33141962_33141987_33161298
transcript_15527.nic	chr11	-	728	4	ISM	ENSG00000176102.13	ENST00000524827.6	2911	22	-2	56836	-1	34	5prime_fragment	FALSE	canonical	3	24	junction_3	241.381210720489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	-33151158	True	NA	-20	True	ATTAAA	-16	NA	33161496	33141430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_33141763_33141884_33141987_33156707_33156804_33161298
transcript_15528.known	chr11	-	1132	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	4	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAGACTGGAATTA	NA	False	NA	NA	False	TTTAAA	-45	NA	33161531	33140965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33141763_33141884_33141987_33161298
transcript_15529.known	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-33151153	True	NA	17	True	NA	NA	NA	33161491	33141464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33141987_33161298
transcript_15530.known	chr11	+	568	3	FSM	ENSG00000247151.7	ENST00000531870.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATACAGACACATGGC	33161361	True	NA	NA	False	NA	NA	NA	33161656	33190294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_33161782_33188769_33188851_33189932
transcript_15531.known	chr11	-	7724	6	FSM	ENSG00000085063.17	ENST00000651785.1	7724	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	185.771472513947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-33731391	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33733494_33733611_33736381
transcript_15532.known	chr11	-	678	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	175.074269954211	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	-33731447	True	NA	-26	True	AATAAA	-15	NA	33736479	33709995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
transcript_15534.known	chr11	-	686	5	FSM	ENSG00000085063.17	ENST00000527577.5	686	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	197.020303522251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGCAACCTGGCTAAGA	-33731393	True	NA	-35	True	AATAAA	-6	NA	33736425	33710004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33733494_33733611_33736381
transcript_15538.known	chr11	-	7563	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	58.0746645850552	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-33731391	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
transcript_15542.known	chr11	-	2403	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	30.4197304393053	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTGTATAATTG	-33772570	True	NA	-6	True	TTTAAA	-19	NA	33774520	33740943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15544.nnic	chr11	-	1654	11	NNC	ENSG00000110429.14	novel	1672	10	NA	NA	-1	-1034	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	63.1819594504634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTACTGATGGTTGAAT	-33772576	True	NA	1	True	AATAAA	-20	NA	33774526	33742772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_33743159_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15545.known	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	13.1749856513615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15546.known	chr11	+	3438	18	FSM	ENSG00000135387.21	ENST00000532820.5	3438	18	0	0	0	0	multi-exon	FALSE	canonical	2	971	junction_12	136.083045070682	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGATGGTATAAGCAAAA	34045549	False	NA	-38	True	NA	NA	NA	34052209	34100464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
transcript_15549.known	chr11	+	3973	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_13	28.0641348212502	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	34097866	True	NA	31	True	AATAAA	-17	NA	34105628	34146908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_15557.known	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	13.5820551545862	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	34437578	True	NA	9	True	AATAAA	-20	NA	34438933	34472060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
transcript_1556.known	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2732.3762112857	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	23576114	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_15562.known	chr11	+	2659	11	FSM	ENSG00000110435.13	ENST00000448838.8	2659	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.132604641256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	NA	False	NA	23	True	AATAAA	-19	NA	34916129	34996128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34916487_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_15563.known	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	46.4207927549713	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	34910616	True	NA	23	True	AATAAA	-19	NA	34916617	34996128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_15567.known	chr11	+	952	6	FSM	ENSG00000110435.13	ENST00000430469.6	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	182.999453551097	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTATTTATTTAA	34910630	True	NA	NA	False	AAGAAA	-45	NA	34916631	34995275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34984569_34984729_34992314_34992380_34994913
transcript_1557.known	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2962.72479104962	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	23576114	True	NA	42	True	AATAAA	-39	NA	23691805	23696412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
transcript_15570.nnic	chr11	-	1287	8	NNC	ENSG00000149089.13	novel	1246	7	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	116.909523712544	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	-34911707	True	NA	-13	True	AATAAA	-15	NA	34916400	34882369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34896760_34896856_34916227
transcript_15573.known	chr11	-	1246	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_5	13.6381816969859	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCCTCAATGTTAATG	-34911686	True	NA	-4	True	AATAAA	-21	NA	34916379	34882294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_15578.known	chr11	-	1042	6	FSM	ENSG00000149089.13	ENST00000527830.1	1042	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.835348276512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	-34911658	True	NA	-13	True	AATAAA	-15	NA	34916351	34882369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34916227
transcript_1558.known	chr1	+	879	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	7245	junction_4	2189.55777498562	2941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTCTGTTGTGTGT	23692283	False	NA	48	True	AATAAA	-45	NA	23692305	23696418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_15580.known	chr11	+	2292	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	7.47558007920865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	35138650	True	NA	9	True	AATAAA	-24	NA	35139187	35230027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_15584.known	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.28490254498827	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	35138633	True	NA	14	True	ATTAAA	-32	NA	35139170	35232402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_15586.known	chr11	-	2723	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	2.76405499221705	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGCTATGCTCTTAT	-35525492	True	NA	NA	False	AATAAA	-28	NA	35525616	35431826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_15587.known	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	25.7342184649155	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	35660488	True	NA	3	True	ATTAAA	-16	NA	35662774	35818007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
transcript_15589.known	chr11	+	3814	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	10.8369737473153	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	35941474	True	NA	8	True	AATAAA	-18	NA	35944061	36232136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_15590.nnic	chr11	-	1383	6	NNC	ENSG00000110442.12	novel	2949	6	NA	NA	62	0	intron_retention	FALSE	canonical	0	0	junction_5	115.149641771045	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTGTAGCTTCTT	-36286416	True	NA	-4	True	ACTAAA	-19	NA	36289362	36273959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289197
transcript_15591.known	chr11	-	2949	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_3	20.6842935581566	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTGATCATTTAAGGCA	-36286478	True	NA	NA	False	AATAAA	-17	NA	36289424	36272291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_15592.known	chr11	-	917	5	FSM	ENSG00000110442.12	ENST00000452374.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	124.407345040395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGAGGGAATCGGACA	-36286503	True	NA	NA	False	NA	NA	NA	36289449	36274222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36289361
transcript_15594.nnic	chr11	-	1196	5	NIC	ENSG00000110442.12	novel	2949	6	NA	NA	6	0	intron_retention	FALSE	canonical	2	5	junction_1	117.486169398785	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTGTAGCTTCTT	-36286497	True	NA	-4	True	ACTAAA	-19	NA	36289443	36273959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_36274773_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_15595.known	chr11	-	7885	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	14.1037819986934	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGTCCAAGTGGTTT	-36509301	True	NA	-14	True	ATTAAA	-21	NA	36510272	36483768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
transcript_15597.known	chr11	+	930	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	8.49941174435031	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	36593869	True	NA	26	True	AATAAA	-33	NA	36594501	36659287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15598.known	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9.81019877474458	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593869	True	NA	11	True	AATAAA	-18	NA	36594501	36659272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15599.known	chr11	+	857	6	FSM	ENSG00000166352.18	ENST00000677623.1	857	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.2169743366013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGCACTCATTTATC	36594064	False	NA	30	True	AATAAA	-37	NA	36594696	36659291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594762_36610080_36610240_36633285_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15600.known	chr11	+	1207	6	FSM	ENSG00000166352.18	ENST00000617650.5	1207	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.895250766614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGCACTCATTTA	36593868	True	NA	28	True	AATAAA	-35	NA	36594500	36659289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15601.known	chr11	+	2571	5	FSM	ENSG00000166352.18	ENST00000678480.1	2571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.5089269450949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCATTCTAGTACACT	36594140	False	NA	NA	False	AATATA	-9	NA	36594772	36660992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_15602.known	chr11	+	646	4	FSM	ENSG00000166352.18	ENST00000527108.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.062378404209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCCTTTGTGGAAATT	36593913	True	NA	8	True	AATAAA	-15	NA	36594545	36659269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594642_36610080_36610240_36648015_36648156_36659018
transcript_15603.known	chr11	+	633	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.6733320005331	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593880	True	NA	11	True	AATAAA	-18	NA	36594512	36659272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
transcript_15604.known	chr11	+	801	4	FSM	ENSG00000166352.18	ENST00000534635.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.7715410570772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGTGGAAATTTACAT	36593883	True	NA	13	True	AATAAA	-20	NA	36594515	36659274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594762_36610080_36610240_36648015_36648156_36659018
transcript_15605.nic	chr11	+	952	4	NIC	ENSG00000166352.18	novel	2571	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	23.0988215187606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593884	True	NA	11	True	AATAAA	-18	NA	36594516	36659272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_36594916_36610080_36610240_36648015_36648156_36659018
transcript_15606.nnic	chr11	+	513	3	NIC	ENSG00000166352.18	novel	1005	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593890	True	NA	11	True	AATAAA	-18	NA	36594522	36659272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_36594642_36648015_36648156_36659018
transcript_15607.nic	chr11	+	4666	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_19	127.838215628192	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	43358900	False	NA	7	True	AATAAA	-18	NA	43358912	43494931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_15608.known	chr11	+	3648	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_19	151.783524228247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	43352613	True	NA	NA	False	TATAAA	-16	NA	43358931	43446719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
transcript_15610.nic	chr11	+	1438	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-19	45097	-7	0	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	43358900	False	NA	20	True	TATAAA	-32	NA	43358912	43401622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_15611.nic	chr11	+	1831	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-19	44704	-7	393	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAAGAGC	43358900	False	NA	NA	False	AATAAA	-29	NA	43358912	43402015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_15615.nic	chr11	+	970	6	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-19	49746	-7	-1085	5prime_fragment	FALSE	canonical	3	742	junction_5	63.2379632815605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	43358900	False	NA	NA	False	AAGAAA	-30	NA	43358912	43396973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_15616.nic	chr11	+	1315	3	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-19	56044	-7	-1113	5prime_fragment	FALSE	canonical	3	790	junction_2	34.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAAAAATAAAATTGAA	43358900	False	NA	NA	False	AATAAA	-42	NA	43358912	43390675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651
transcript_15617.known	chr11	+	2257	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	464.027428156604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	43293756	True	NA	NA	False	AATAAA	-14	NA	43311977	43342980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_1562.known	chr1	+	2671	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	1	2166	1	-2130	multi-exon	FALSE	canonical	3	319	junction_10	36.7294160040695	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	23738841	True	NA	11	True	AATAAA	-15	NA	23743471	23759893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_15620.known	chr11	+	3726	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_13	239.973445276493	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293774	True	NA	23	True	AATAAA	-18	NA	43311995	43344529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_15621.known	chr11	+	3714	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_13	237.266758718746	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293781	True	NA	23	True	AATAAA	-18	NA	43312002	43344529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
transcript_15622.known	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1219	junction_9	132.236530505001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	43293874	True	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
transcript_15626.nnic	chr11	+	3015	7	NIC	ENSG00000166181.13	novel	3726	14	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	557.337544840547	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTGTCTTGATG	43293739	True	NA	19	True	AATAAA	-14	NA	43311960	43344525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43342427
transcript_15629.nnic	chr11	+	2316	12	NNC	ENSG00000149084.13	novel	2396	11	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_11	299.065652429044	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	43668748	True	NA	27	True	AATAAA	-43	NA	43680691	43856615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143_43855769_43855894
transcript_15633.known	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_3	39.7830365859621	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	43668794	True	NA	27	True	AATAAA	-43	NA	43680737	43856615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_15639.known	chr11	+	994	4	FSM	ENSG00000149084.13	ENST00000395700.4	994	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	489.795422146385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATGAGTCCTTGTTTT	43668837	True	NA	NA	False	AATAAA	-21	NA	43680780	43755536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43754872
transcript_15640.nic	chr11	+	1804	10	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	17.9009621094634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880000	True	NA	3	True	ATTAAA	-16	NA	43880829	43920266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881447_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_15641.known	chr11	+	1544	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	12.3867711194416	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	43880001	True	NA	11	True	ATTAAA	-24	NA	43880830	43920274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_15643.nnic	chr11	+	1326	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	19.4096464419113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880001	True	NA	3	True	ATTAAA	-16	NA	43880830	43920266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43919037_43919137_43919917
transcript_15644.nic	chr11	+	1447	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	18.3809514171601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880001	True	NA	3	True	ATTAAA	-16	NA	43880830	43920266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43901515_43901726_43919037_43919137_43919917
transcript_15647.nic	chr11	+	1237	8	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	20.1919361556609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880001	True	NA	3	True	ATTAAA	-16	NA	43880830	43920266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
transcript_1565.nic	chr1	+	1334	4	ISM	ENSG00000011007.13	ENST00000609199.2	5075	10	-29	10169	-29	910	5prime_fragment	FALSE	canonical	3	345	junction_2	6.18241233033047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAAAGAAAAAGATT	23738788	True	NA	-45	True	NA	NA	NA	23743418	23751854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844
transcript_15650.known	chr11	+	2383	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	5.57005477568054	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGGAGAATGGAATGA	44066246	True	NA	4	True	AATAAA	-21	NA	44066269	44084237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_15652.known	chr11	+	4928	12	FSM	ENSG00000151348.16	ENST00000684533.1	4928	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	60.7827726789874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	44090544	True	NA	NA	False	TATAAA	-23	NA	44095662	44247174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_15653.nnic	chr11	+	1495	6	NNC	ENSG00000151348.16	novel	3631	4	NA	NA	-5518	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	89.749874651723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	44199368	True	NA	16	True	ATTAAA	-20	NA	44199464	44244931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_44199654_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_15656.nnic	chr11	+	1834	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-25	70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.8392398878334	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGGGGAGGG	44564577	True	NA	NA	False	NA	NA	NA	44565575	44619779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615170_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_15657.nnic	chr11	+	2413	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.8392398878334	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	44564577	True	NA	5	True	ATTAAA	-15	NA	44565575	44620358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615170_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_15659.known	chr11	+	2212	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	9.7080849594679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	44564664	True	NA	5	True	ATTAAA	-15	NA	44565662	44620358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_1566.known	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	10	junction_2	4.54606056566195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-23777653	True	NA	NA	False	NA	NA	NA	23778287	23760381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
transcript_15663.known	chr11	-	3567	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	56.7707377675037	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-1	True	AAGAAA	-30	NA	44951306	44932347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_15666.nic	chr11	-	820	6	NIC	ENSG00000175274.19	novel	708	7	NA	NA	67	-116	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	79.348850023173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGGTAATATGCCTCTA	-44950920	False	NA	-8	True	TTTAAA	-6	NA	44950975	44936333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_44936690_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_15667.known	chr11	+	993	3	FSM	ENSG00000254427.3	ENST00000669834.2	1006	3	13	0	3	0	multi-exon	FALSE	canonical	2	15	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAAGCAAAAACCTGGG	45355383	True	NA	NA	False	NA	NA	NA	45355472	45357211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_45355603_45355878_45355926_45356395
transcript_15668.known	chr11	+	361	2	FSM	ENSG00000254427.3	ENST00000524488.1	361	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTGTGTGGTCTTTAGT	45355410	True	NA	4	True	AATAAA	-12	NA	45355499	45356653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_45355603_45356395
transcript_15669.known	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	45804541	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_45806337_45810775
transcript_1567.known	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-23777662	True	NA	-23	True	ATTAAA	-18	NA	23778296	23760520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
transcript_15673.known	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	14.7	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	-45916546	True	NA	-2	True	AGTAAA	-23	NA	45917877	45909662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_15674.nic	chr11	-	1217	11	NIC	ENSG00000121680.16	novel	1668	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_10	58.5649212413028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGGCCTCTCCGTGCCT	-45917997	False	NA	0	True	AATAAA	-23	NA	45918007	45910169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917773
transcript_15675.known	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	57.6919405116521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	-45918342	True	NA	-35	True	NA	NA	NA	45918812	45910204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
transcript_15676.nnic	chr11	-	1121	11	NNC	ENSG00000121680.16	novel	1668	11	NA	NA	-4579	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	59.1473583518317	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGGCCTCTCCGTGCCT	-45923299	True	NA	0	True	AATAAA	-23	NA	45923391	45910169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45923253
transcript_15681.nnic	chr11	-	1909	9	NIC	ENSG00000121680.16	novel	1668	11	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	66.2037574462356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGGCCTCTCCGTGCCT	-45918841	False	NA	0	True	AATAAA	-23	NA	45918851	45910169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_15688.nnic	chr11	+	2210	12	NNC	ENSG00000157613.11	novel	1817	4	NA	NA	-406	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9897343706531	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	46294529	True	NA	NA	False	AAGAAA	-26	NA	46294719	46321409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_46294809_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_15689.known	chr11	+	3118	31	FSM	ENSG00000149091.15	ENST00000532868.6	3118	31	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	147.541090321759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGCCTCACCTGTTCC	46345161	True	NA	NA	False	NA	NA	NA	46345266	46380120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46345586_46367290_46367400_46367654_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
transcript_15692.known	chr11	+	1166	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	3740.20871743811	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTCTTCTTTTTT	46380743	False	NA	-12	True	AATAAA	-17	NA	46380755	46383799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15694.known	chr11	+	985	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3839.67088433371	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	46380310	True	NA	14	True	AATAAA	-43	NA	46381067	46383825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15695.known	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	5885	junction_1	1301.04465238515	2235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	46297178	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15699.known	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	3745.83030682117	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	46297220	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15702.known	chr11	+	498	4	FSM	ENSG00000110492.17	ENST00000533283.5	498	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4224.06639257587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCCACCAGTGCCTT	46297202	True	NA	NA	False	NA	NA	NA	46381692	46383570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381759_46382293_46382462_46382586_46382749_46383468
transcript_15704.known	chr11	+	1026	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	8656	junction_1	224.156195542305	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	46297262	True	NA	-28	True	AATAAA	-1	NA	46381752	46383783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15705.known	chr11	-	561	4	FSM	ENSG00000110497.15	ENST00000531542.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.7097066068763	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATTGCCACTGCCAAT	-46589974	True	NA	NA	False	NA	NA	NA	46593998	46545700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46545777_46547816_46547876_46548245_46548501_46593827
transcript_15706.known	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	-46429127	True	NA	-60	True	NA	NA	NA	46429150	46428652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46428700_46429200
transcript_15711.nic	chr11	+	2924	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-223	0	combination_of_known_junctions	TRUE	canonical	3	70	junction_2	102.186612656592	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617071	True	NA	18	True	AATAAA	-20	NA	46617303	46673041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15715.nic	chr11	+	2868	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-223	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	109.179593302732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617071	True	NA	18	True	AATAAA	-20	NA	46617303	46673041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15716.known	chr11	+	4014	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	63.7075532707857	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	46613995	True	NA	14	True	AATAAA	-20	NA	46617576	46674520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15718.known	chr11	+	4348	17	FSM	ENSG00000175224.17	ENST00000359513.8	4348	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	144.071976369452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGTTATCAGCTCTT	46614014	False	NA	NA	False	AGTAAA	-17	NA	46617595	46674818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15719.nic	chr11	+	2514	16	NIC	ENSG00000175224.17	novel	2566	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	82.1141211296138	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46613960	True	NA	18	True	AATAAA	-20	NA	46617541	46673041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15720.known	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	14	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-46616812	True	NA	NA	False	NA	NA	NA	46617227	46602860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46603910_46615567_46616382_46617123
transcript_15721.nic	chr11	-	1767	3	NIC	ENSG00000180423.4	novel	1967	3	NA	NA	-17	-461	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	30	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGCTCCCTACTATCCA	-46617890	True	NA	-15	True	ATTAAA	-13	NA	46617926	46603321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_46603910_46615567_46616382_46617561
transcript_15722.known	chr11	+	4246	19	FSM	ENSG00000175224.17	ENST00000683050.1	4246	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	149.372101449227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	46613971	True	NA	12	True	AATAAA	-18	NA	46617552	46674518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46663996_46664096_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15723.known	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	20.1225412576709	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-46693144	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_15724.known	chr11	+	2229	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_2	3.64005494464026	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	46699788	True	NA	13	True	CATAAA	-17	NA	46701030	46705912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
transcript_15727.known	chr11	-	6532	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	167.848012247448	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAAGATGCTCCATAT	-46836485	True	NA	-9	True	AATAAA	-21	NA	46846308	46743535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_15729.nic	chr11	+	236	2	FSM	ENSG00000247675.8	ENST00000685514.1	392	2	-16	172	-16	0	multi-exon	FALSE	canonical	3	16	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGGAGTTGTTTCCTT	46846331	True	NA	NA	False	AGTAAA	-18	NA	46846393	46846739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46846500_46846609
transcript_15731.known	chr11	+	1540	3	FSM	ENSG00000247675.8	ENST00000502049.3	1540	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCATTTGATTGGGG	46846353	True	NA	8	True	AATAAA	-44	NA	46846415	46874421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46846500_46846609_46846718_46873073
transcript_15732.known	chr11	+	1651	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	77.1050419881865	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933786	True	NA	24	True	AATAAA	-21	NA	46936777	47162247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_15733.known	chr11	+	1650	9	FSM	ENSG00000149179.14	ENST00000278460.12	1650	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	29.9081928574764	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933769	True	NA	24	True	AATAAA	-21	NA	46936760	47162247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_15734.nnic	chr11	+	1170	9	NNC	ENSG00000149179.14	novel	1650	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	83.6671231727254	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933715	True	NA	24	True	AATAAA	-21	NA	46936706	47162247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161997
transcript_15738.known	chr11	+	1916	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	10.7760126660835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933776	True	NA	24	True	AATAAA	-21	NA	46936767	47162247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
transcript_15739.known	chr11	+	1069	8	FSM	ENSG00000149179.14	ENST00000527784.5	1069	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	91.5991711931135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCCTGCTCTCC	46933788	True	NA	NA	False	GGGGCT	-31	NA	46936779	47161816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_15740.nic	chr11	+	1608	8	NIC	ENSG00000149179.14	novel	1651	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	101.575748350978	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933726	True	NA	24	True	AATAAA	-21	NA	46936717	47162247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_15741.known	chr11	+	1527	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	77.6722575430683	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	46933787	True	NA	22	True	AATAAA	-19	NA	46936778	47162245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_15746.known	chr11	+	719	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	4.89897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAAAGAGGGGCTG	46933768	True	NA	NA	False	NA	NA	NA	46936759	47138037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
transcript_15748.known	chr11	+	825	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAATATGAAGAAAGAAA	46933753	True	NA	NA	False	ATTAAA	-28	NA	46936744	47053002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387
transcript_15749.known	chr11	+	770	2	FSM	ENSG00000149179.14	ENST00000531648.5	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAATCCCATCAAAAAAT	46933756	True	NA	NA	False	AATATA	-34	NA	46936747	46987873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207
transcript_15751.known	chr11	+	2141	1	FSM	ENSG00000149179.14	ENST00000624693.1	2141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	47160085	False	NA	22	True	AATAAA	-19	NA	47160104	47162245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47160100_47162200
transcript_15752.known	chr11	+	1166	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	86.9511357027612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	46933762	True	NA	NA	False	AATACA	-18	NA	46936753	47164385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
transcript_15754.known	chr11	-	2773	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_10	38.8286263241725	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-47169047	True	NA	-4	True	AATAAA	-39	NA	47176879	47164300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_1576.known	chr1	+	1635	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	0	0	0	0	multi-exon	TRUE	canonical	3	1879	junction_1	100.551933636428	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	23769762	True	NA	15	True	ATTAAA	-17	NA	23791144	23795539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_15761.nic	chr11	-	2396	12	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_9	120.255238197966	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-47169025	True	NA	-4	True	AATAAA	-39	NA	47176857	47164300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47175850_47175924_47176515_47176635_47176781
transcript_15763.known	chr11	-	2613	11	FSM	ENSG00000149182.15	ENST00000627920.2	2613	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	129.310053746799	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTCTGGATCCTGCC	-47177066	False	NA	-2	True	AATAAA	-41	NA	47177125	47164298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47175850_47175924_47176515_47176635_47176781
transcript_15766.known	chr11	-	451	4	FSM	ENSG00000149182.15	ENST00000530794.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	34.6538437823121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGTTAGGAGTATTCAG	-47169048	True	NA	NA	False	GGGGCT	-7	NA	47176880	47175153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47175314_47175850_47175924_47176515_47176635_47176781
transcript_1577.known	chr1	+	868	10	FSM	ENSG00000011009.11	ENST00000374503.7	868	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_8	659.006341414627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGGAGGCGGGCCCC	23769820	True	NA	NA	False	NA	NA	NA	23791202	23794955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794551_23794601_23794681
transcript_15770.known	chr11	-	1845	11	FSM	ENSG00000165912.16	ENST00000532457.5	1845	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.022606843951	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACACACACCCACACACA	-47182310	True	NA	-45	True	ATTAAA	-3	NA	47186440	47177556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47178047_47178365_47178488_47178893_47179028_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_15775.nic	chr11	-	1786	10	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	143.391547179285	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47182308	True	NA	-10	True	ATTAAA	-38	NA	47186438	47177521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47183003_47183070_47186348
transcript_15782.known	chr11	+	1815	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_6	83.0686165873033	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	47210429	True	NA	25	True	AATAAA	-15	NA	47214973	47239217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15788.known	chr11	+	1591	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	145.439796393559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	47210447	True	NA	-3	True	NA	NA	NA	47214991	47239189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15792.known	chr11	+	960	8	FSM	ENSG00000134574.12	ENST00000616278.4	960	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	202.726718636147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	47210592	False	NA	NA	False	NA	NA	NA	47215136	47238849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15794.known	chr11	+	717	6	FSM	ENSG00000134574.12	ENST00000378600.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	196.569580556097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	47210592	False	NA	NA	False	NA	NA	NA	47215136	47238849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_15797.known	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	47210513	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857
transcript_15798.known	chr11	+	3101	8	FSM	ENSG00000134574.12	ENST00000612309.4	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	78.4541982591741	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	47210550	True	NA	25	True	AATAAA	-15	NA	47215094	47239217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15799.known	chr11	+	660	3	FSM	ENSG00000134574.12	ENST00000614884.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	60	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	NA	False	NA	25	True	AATAAA	-15	NA	47237805	47239217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47238002_47238137_47238184_47238799
transcript_15803.known	chr11	-	2200	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_5	11.5585466214399	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	-47247131	False	NA	-4	True	AATGAA	-24	NA	47248906	47239304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_15804.nic	chr11	+	1635	10	NIC	ENSG00000025434.19	novel	2731	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	32.9200303016526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247893	True	NA	9	True	ATTAAA	-16	NA	47248894	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15806.known	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	29.0516780926679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	47257602	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15807.known	chr11	+	1501	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	27.3104261226368	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	47247914	True	NA	-24	True	NA	NA	NA	47248915	47268812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15808.known	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.1870396862601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	47247954	True	NA	-55	True	NA	NA	NA	47248955	47268781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_1581.nic	chr1	+	1613	10	NIC	ENSG00000011009.11	novel	717	9	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	637.72688530978	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	23770551	False	NA	15	True	ATTAAA	-17	NA	23791933	23795539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_23792018_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_15811.known	chr11	+	1704	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	28.4827194299008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	47247922	True	NA	-5	True	ATTAAA	-2	NA	47248923	47268831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15812.known	chr11	+	1352	8	FSM	ENSG00000025434.19	ENST00000405576.5	1352	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	34.2446182275554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	47247914	True	NA	7	True	ATTAAA	-14	NA	47248915	47268843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15813.nic	chr11	+	1313	8	NIC	ENSG00000025434.19	novel	1501	9	NA	NA	-46	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_2	35.8169951678968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247868	True	NA	9	True	ATTAAA	-16	NA	47248869	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259790_47259980_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15816.nic	chr11	+	1505	7	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-46	0	intron_retention	FALSE	canonical	3	14	junction_2	38.5634397958596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247868	True	NA	9	True	ATTAAA	-16	NA	47248869	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259790_47259980_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15817.nic	chr11	+	1133	7	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	42.2794933218878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247868	True	NA	9	True	ATTAAA	-16	NA	47248869	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259790_47259980_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15824.nic	chr11	+	934	6	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	43.0970996703955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247878	True	NA	9	True	ATTAAA	-16	NA	47248879	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15825.nic	chr11	+	1211	6	NIC	ENSG00000025434.19	novel	1501	9	NA	NA	-36	0	intron_retention	FALSE	canonical	3	15	junction_1	37.0264770130781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247878	True	NA	9	True	ATTAAA	-16	NA	47248879	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47261240_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15828.nic	chr11	+	1403	5	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-36	0	intron_retention	FALSE	canonical	3	15	junction_1	40.3174900012389	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247878	True	NA	9	True	ATTAAA	-16	NA	47248879	47268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47261240_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15829.known	chr11	+	1480	9	FSM	ENSG00000025434.19	ENST00000405853.7	1480	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	34.6876689185076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	47257604	True	NA	7	True	ATTAAA	-14	NA	47257997	47268843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_15831.nic	chr11	+	2309	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	162	junction_1	25.3542798393652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407535	True	NA	30	True	AATAAA	-14	NA	47408589	47416496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_15837.known	chr11	+	2330	10	FSM	ENSG00000165915.14	ENST00000362021.9	2330	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.8245740090284	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407535	True	NA	30	True	AATAAA	-14	NA	47408589	47416496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415038_47415160_47415287
transcript_15844.nic	chr11	-	1439	12	NIC	ENSG00000165916.9	novel	1540	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_11	586.403071260265	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	-47404933	True	NA	-8	True	AATAAA	-16	NA	47426250	47418774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426116
transcript_15846.known	chr11	-	1540	12	FSM	ENSG00000165916.9	ENST00000298852.8	1540	12	0	0	0	0	multi-exon	FALSE	canonical	3	1881	junction_11	122.136896503896	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	-47421964	True	NA	-8	True	AATAAA	-16	NA	47426439	47418774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
transcript_1586.known	chr1	+	842	9	FSM	ENSG00000011009.11	ENST00000495365.5	842	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	690.27005584771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCCTGGCCGGGCCTT	23769820	True	NA	NA	False	NA	NA	NA	23791202	23794875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_15874.known	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	14.2361043360417	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	47557560	True	NA	11	True	AATAAA	-21	NA	47565598	47573461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
transcript_15876.known	chr11	-	2460	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	48.6643835080875	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	-47576564	True	NA	-2	True	AATAAA	-14	NA	47578969	47572197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
transcript_15878.known	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	18.6726180988812	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576565	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
transcript_15882.known	chr11	+	928	3	FSM	ENSG00000110536.14	ENST00000326656.12	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	285	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTCCCCTGAGGGAA	47557560	True	NA	NA	False	NA	NA	NA	47565598	47572119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47565797_47565905_47565987_47571470
transcript_15884.known	chr11	-	4583	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	107.541762907397	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	-47534988	True	NA	1	True	ATTAAA	-19	NA	47553117	47465932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_15885.known	chr11	+	894	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	38.7499103941616	1248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	47566137	True	NA	29	True	AATAAA	-17	NA	47579073	47584562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
transcript_15890.known	chr11	-	2522	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_10	92.9043713838171	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTTTATCCTGTGGC	-47627796	True	NA	-11	True	AGTAAA	-18	NA	47642559	47617316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_15891.nic	chr11	-	1170	13	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_12	337.648845778503	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	-47627853	True	NA	-11	True	NA	NA	NA	47642616	47618703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642400
transcript_15903.nnic	chr11	-	1132	12	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	99	junction_2	350.732221087671	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	-47642549	False	75	-11	True	NA	NA	NA	47642624	47618703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47618920_47622700_47622777_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_15925.known	chr11	-	581	6	FSM	ENSG00000109919.10	ENST00000539759.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.067932598391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATCCTGTGGCTT	-47642377	False	NA	-9	True	AGTAAA	-20	NA	47642452	47617314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47617540_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_15926.nic	chr11	-	1419	6	ISM	ENSG00000165923.17	ENST00000528244.5	2929	16	-32	32743	-12	163	intron_retention	FALSE	canonical	1	1	junction_1	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTAGTGGTAAACTC	-47715391	False	NA	NA	False	AATAAA	-35	NA	47715401	47699357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_47699554_47704542_47704729_47705863_47705918_47710376_47710512_47714283_47714348_47714617
transcript_1593.known	chr1	+	717	9	FSM	ENSG00000011009.11	ENST00000492577.1	717	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	877.774093588436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCCTCCTGTCTAA	23790460	True	NA	NA	False	NA	NA	NA	23791970	23794712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23792018_23792656_23792761_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_15930.known	chr11	-	5376	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_21	68.4730484741766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGAGGTGTGTGTTTC	-47848422	False	NA	-3	True	NA	NA	NA	47848467	47778086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_15932.nic	chr11	-	1559	9	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-20	29364	-20	0	5prime_fragment	FALSE	canonical	3	594	junction_3	51.7528682779998	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-47839419	True	NA	NA	False	NA	NA	NA	47848354	47821375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_15939.nic	chr11	-	1021	4	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-20	47492	-20	-3	5prime_fragment	FALSE	canonical	3	632	junction_2	64.240866190369	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCACTGTGTCTTGCCT	-47839419	True	NA	-6	True	ATTAAA	-37	NA	47848354	47839503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_47840066_47840377_47840589_47847847_47847960_47848218
transcript_15940.known	chr11	-	1537	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	77	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-47848510	False	NA	-3	True	ATTAAA	-40	NA	47848555	47839500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47840589_47847847_47847960_47848218
transcript_15941.known	chr11	+	3158	9	FSM	ENSG00000149177.14	ENST00000440289.6	3158	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	12.1243556529821	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGATTCCTTGAAAC	47979273	False	NA	NA	False	AATAAA	-26	NA	47980579	48132720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48131510
transcript_15942.known	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_10	110.060335015618	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-57312421	True	NA	-23	True	AATAAA	-19	NA	57335892	57325987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_15944.nic	chr11	-	3045	16	ISM	ENSG00000149136.9	ENST00000278412.7	2831	17	275	0	-144	0	3prime_fragment	FALSE	canonical	3	893	junction_10	110.01737236556	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-57312146	False	23471	-23	True	AATAAA	-19	NA	57335617	57325987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067
transcript_15947.known	chr11	-	675	8	FSM	ENSG00000149136.9	ENST00000635721.1	675	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	521.884692871003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGTAAAGGTAAAGA	-57307456	False	NA	-19	True	AATACA	-20	NA	57330927	57326871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330732_57330742_57330854
transcript_15948.nic	chr11	-	2625	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	40.0814259983246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424633	True	NA	0	True	AATAAA	-20	NA	57427163	57406953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57426587_57426653_57427061
transcript_15949.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_12	23.2361175707844	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424591	True	NA	0	True	AATAAA	-20	NA	57427121	57406953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
transcript_1595.known	chr1	+	1072	8	FSM	ENSG00000011009.11	ENST00000374502.7	1072	8	0	0	0	0	multi-exon	FALSE	canonical	3	1879	junction_1	107.578353030786	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCAAGGCCTGGCCGG	23769838	True	NA	NA	False	NA	NA	NA	23791220	23794870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223
transcript_15950.nic	chr11	-	2698	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_12	37.7959329079029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424633	True	NA	0	True	AATAAA	-20	NA	57427163	57406953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
transcript_15952.nic	chr11	-	2510	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	45.68065479196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424583	True	NA	0	True	AATAAA	-20	NA	57427113	57406953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57427061
transcript_15953.nic	chr11	-	2561	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_12	49.8313823475395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424598	True	NA	0	True	AATAAA	-20	NA	57427128	57406953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57427061
transcript_15958.known	chr11	-	2514	15	FSM	ENSG00000149150.9	ENST00000278426.8	2514	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	19.9377858881684	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57515253	True	NA	-5	True	AATAAA	-16	NA	57515702	57484533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
transcript_15969.known	chr11	-	668	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_2	84.5	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGCAAAGCAGTGTGC	-57522259	True	NA	-8	True	TATAAA	-19	NA	57530754	57528463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57528919_57530118_57530235_57530657
transcript_15971.known	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	487.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	-57522239	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57528919_57530118_57530294_57530657
transcript_15979.nic	chr11	+	825	5	ISM	ENSG00000214872.9	ENST00000527972.6	1695	8	6231	-2	6231	2	3prime_fragment	FALSE	canonical	1	2	junction_4	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCCCTCAGTGCTCTC	57543803	False	NA	NA	False	ATTAAA	-21	NA	57543825	57550274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_57543921_57545880_57546037_57546232_57546348_57546500_57546653_57549967
transcript_15981.known	chr11	-	1219	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_3	60.0721788073869	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTGCAGCTGAGTC	-57564461	True	NA	-11	True	ATTAAA	-13	NA	57567672	57551661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
transcript_15982.known	chr11	-	1573	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	201.490005266321	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	-57568023	True	NA	-5	True	ATTAAA	-19	NA	57568284	57551655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
transcript_15983.known	chr11	+	1830	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	162.783692709819	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	57595371	True	NA	16	True	AATAAA	-17	NA	57597684	57614848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_15985.nic	chr11	+	1864	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	492	0	-7	0	3prime_fragment	FALSE	canonical	3	428	junction_2	69.184937345896	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	57593229	True	NA	16	True	AATAAA	-17	NA	57598176	57614848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_15986.known	chr11	+	1004	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	216.239126894279	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGGATCAGGTTAG	57593323	False	NA	NA	False	NA	NA	NA	57598270	57614581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_15989.nnic	chr11	+	884	3	NIC	ENSG00000149131.17	novel	1748	7	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	57593231	True	NA	16	True	AATAAA	-17	NA	57598178	57614848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_57598322_57611716_57611937_57614327
transcript_1599.known	chr1	+	907	7	FSM	ENSG00000011009.11	ENST00000374505.6	907	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	792.534331538178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCAGTACCCCAGCTC	23769804	True	NA	NA	False	NA	NA	NA	23791186	23794745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794223
transcript_15990.known	chr11	+	841	3	FSM	ENSG00000149131.17	ENST00000528996.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	315.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTTTTTTAT	57593281	True	NA	25	True	AATAAA	-26	NA	57598228	57614857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57598329_57611725_57611937_57614327
transcript_15991.known	chr11	+	1634	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	95	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	57653648	True	NA	31	True	AATAAA	-18	NA	57657762	57661864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57657861_57659454_57659891_57660764
transcript_15992.known	chr11	+	1828	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	1	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	57653647	True	NA	32	True	AATAAA	-19	NA	57657761	57661865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57657861_57659454_57660083_57660764
transcript_15994.known	chr11	+	4443	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	44.3343793244322	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	57667941	False	NA	11	True	AATAAA	-18	NA	57668113	57701182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_15996.known	chr11	-	1203	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-108	4	-102	0	multi-exon	FALSE	canonical	3	455	junction_2	23.6259920426635	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	-57712313	False	NA	-5	True	TTTAAA	-25	NA	57712323	57703713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
transcript_15998.known	chr11	+	5380	20	FSM	ENSG00000288534.1	ENST00000673810.1	5380	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	312.65030955763	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAAAGTGTGTATGTG	57705903	True	NA	8	True	AATAAA	-1	NA	57712583	57818431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_16.known	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00043_+_0_1000
transcript_160.known	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6503	junction_10	2237.21177063475	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_16005.known	chr11	+	1697	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	305.977323422798	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	57705933	True	NA	16	True	AATAAA	-18	NA	57712613	57740969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16008.known	chr11	+	1645	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	144.546016964869	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705912	True	NA	20	True	AATAAA	-22	NA	57712592	57740973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16017.known	chr11	+	1521	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	267.958744751667	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705922	True	NA	20	True	AATAAA	-22	NA	57712602	57740973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16022.known	chr11	+	829	6	FSM	ENSG00000213593.10	ENST00000528110.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	369.854349710802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	57705933	True	NA	NA	False	NA	NA	NA	57712613	57740369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16026.known	chr11	+	663	4	FSM	ENSG00000213593.10	ENST00000530114.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	429.950643162161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	57705926	True	NA	NA	False	NA	NA	NA	57712606	57740369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57739130_57739261_57740098
transcript_16028.known	chr11	+	6024	19	FSM	ENSG00000198561.16	ENST00000534579.5	6024	19	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	232.792600960014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748906	True	NA	5	True	ATTAAA	-18	NA	57761800	57819178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57762047_57789036_57789156_57791491_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_16029.known	chr11	+	5727	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	175.398998268947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_16035.known	chr11	+	1291	5	NNC	ENSG00000211450.11	novel	1192	4	NA	NA	-241	-103	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1202.91383211766	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCAAAGTGCTGGGGT	57741238	False	NA	NA	False	NA	NA	NA	57741249	57743411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_57741718_57741808_57741816_57741818_57741955_57742116_57742248_57742862
transcript_16040.known	chr11	+	469	4	FSM	ENSG00000211450.11	ENST00000528798.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	1304.13351395562	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGTAATAGAGTAAAAC	57706728	False	NA	-6	True	AATAAA	-16	NA	57741681	57743038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808_57741955_57742116_57742228_57742862
transcript_16041.known	chr11	+	1192	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	2543	junction_3	180.962856839617	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTATCTTTTTCAAC	57706537	True	NA	1	True	AGTAAA	-20	NA	57741490	57743550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
transcript_16042.known	chr11	+	833	3	FSM	ENSG00000211450.11	ENST00000388857.8	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	2735	junction_2	125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACCTTGTCTTTGTCC	57706618	True	NA	6	True	ATTAAA	-15	NA	57741571	57742657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808_57741955_57742116
transcript_16044.known	chr11	+	1454	2	FSM	ENSG00000211450.11	ENST00000533321.1	1454	2	0	0	0	0	multi-exon	FALSE	canonical	3	2985	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTAAGGGATGGAC	57706559	True	NA	13	True	AATAAA	-35	NA	57741512	57743057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808
transcript_16047.known	chr11	-	1879	9	FSM	ENSG00000110031.13	ENST00000528954.5	1879	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	3.64005494464026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCATATTTGTTTG	-58577947	True	NA	0	True	AATAAA	-21	NA	58578166	58526870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58564154_58564202_58570555_58570714_58578018
transcript_16050.known	chr11	-	1751	8	FSM	ENSG00000110031.13	ENST00000528489.1	1751	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	3.31354671564092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGCTCACTGTCTTA	-58578001	True	NA	NA	False	NA	NA	NA	58578220	58527038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58570555_58570714_58577985
transcript_16056.nic	chr11	+	1641	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	4.06885187191123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAATCTGTATGGATA	58927368	True	NA	7	True	AATAAA	-15	NA	58927639	58956403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_16058.known	chr11	+	1627	8	FSM	ENSG00000166840.14	ENST00000317391.8	1627	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	7.77226886213454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATCTGTATGGATACT	58927429	True	NA	9	True	AATAAA	-17	NA	58927700	58956405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_58927830_58942539_58942585_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_16061.known	chr11	+	3506	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	3.68178700572909	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTATTGGAGGC	59106428	True	NA	15	True	AATAAA	-25	NA	59107236	59127412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
transcript_16064.nnic	chr11	-	1102	5	NNC	ENSG00000245571.7	novel	2063	4	NA	NA	-13	773	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.9530462623758	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTTGGGTATTTCTT	-59142729	True	NA	NA	False	ATTAAA	-21	NA	59143028	59133247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_59133650_59134577_59134684_59136056_59136282_59139956_59140168_59142870
transcript_16065.known	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.0426999794995	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	59143518	True	NA	31	True	ATTAAA	-15	NA	59144778	59155036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
transcript_16068.known	chr11	-	880	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	11.0453610171873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCGGCAAGGAATGGA	-59142716	True	NA	NA	False	NA	NA	NA	59143015	59135289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
transcript_16070.nic	chr11	-	1037	3	ISM	ENSG00000245571.7	ENST00000531708.1	880	4	-75	386	-75	-386	5prime_fragment	FALSE	canonical	3	23	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTATATATATATGTT	-59142791	True	NA	NA	False	ATTAAA	-22	NA	59143090	59135675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_59136282_59139956_59140168_59142870
transcript_16071.known	chr11	-	4129	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	10.6985922692292	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-59667051	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_16077.known	chr11	-	574	4	FSM	ENSG00000166902.5	ENST00000534340.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	597.618235628361	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCGGGACTCTAGAG	-59809925	False	NA	-20	True	NA	NA	NA	59810300	59806534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810239
transcript_16079.known	chr11	-	1083	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	0	0	0	multi-exon	FALSE	canonical	3	1277	junction_1	30.825674724525	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTCATTGGTCAT	-59801363	True	NA	-5	True	AATAAA	-21	NA	59810778	59806139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
transcript_16082.known	chr11	+	1851	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	20.704266871026	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTCCAATGGGGGAA	60835644	True	NA	18	True	AATAAA	-14	NA	60842112	60851081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
transcript_16083.known	chr11	-	2337	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	13.2222035480727	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATGTCCCTGCGGTT	-60892475	True	NA	39	True	AATAAA	-20	NA	60906585	60890546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_16085.nnic	chr11	+	2107	4	NNC	ENSG00000110108.10	novel	1959	3	NA	NA	-550	0	intron_retention	FALSE	canonical	0	0	junction_1	118.104473525208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	60913588	True	NA	23	True	AATAAA	-16	NA	60913607	60923443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_60913697_60919685_60919931_60920885_60920989_60921773
transcript_16086.known	chr11	+	2129	4	FSM	ENSG00000110108.10	ENST00000227525.8	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	13.735598518691	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	60912366	True	NA	23	True	AATAAA	-16	NA	60914157	60923443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_60914269_60919685_60919931_60920885_60920989_60921773
transcript_16088.known	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	74.6705263139346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	-61161070	False	1100	NA	False	NA	NA	NA	61161136	61132443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
transcript_16089.known	chr11	-	2673	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	20.3100960115899	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	-61160326	True	NA	-5	True	AATAAA	-16	NA	61161426	61130256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
transcript_16090.known	chr11	+	1384	9	FSM	ENSG00000229183.10	ENST00000378149.9	1384	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.40725329260975	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61222346	61231694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61222457_61222942_61223106_61225338_61225457_61226325_61226445_61227119_61227320_61228670_61228788_61229918_61230064_61230165_61230265_61231381
transcript_16091.known	chr11	+	1382	9	FSM	ENSG00000256713.8	ENST00000312403.10	1382	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.98956518577535	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61241174	61251444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61241283_61241768_61241932_61244164_61244283_61245151_61245271_61245945_61246146_61248418_61248536_61249668_61249814_61249915_61250015_61251131
transcript_16092.known	chr11	-	4348	28	FSM	ENSG00000167986.15	ENST00000681803.1	4348	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_27	357.056626940671	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-61333602	True	NA	NA	False	AATAAA	-15	NA	61333807	61299454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333603
transcript_16093.known	chr11	-	4245	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	0	0	0	multi-exon	TRUE	canonical	3	1480	junction_18	155.297238380213	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	-61313039	True	NA	NA	False	AATAAA	-19	NA	61333105	61299450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_16094.nic	chr11	+	2618	20	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	65.9887508250995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	61331889	True	NA	NA	False	AAAAAG	-4	NA	61333220	61346890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61333330_61334619_61334732_61335839_61335938_61336203_61336391_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_16100.known	chr11	+	4678	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	23.474347332758	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	61331896	True	NA	NA	False	NA	NA	NA	61333227	61349242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_16105.nnic	chr11	+	2216	17	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	46.1569587792567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	61331889	True	NA	NA	False	AAAAAG	-4	NA	61333220	61346890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_16108.nic	chr11	-	1958	12	ISM	ENSG00000167986.15	ENST00000680096.1	2873	13	100	951	-1	401	3prime_fragment	FALSE	canonical	3	1480	junction_3	129.030843900542	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATGCTACCATCCAAT	-61313045	True	NA	NA	False	TATAAA	-37	NA	61333111	61315879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_1611.known	chr1	-	1488	12	FSM	ENSG00000117308.15	ENST00000374497.7	1488	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	113.975638980406	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	-23796713	False	NA	-9	True	AATAAA	-21	NA	23800402	23795599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800386
transcript_16110.known	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	65.4270118341883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-61361493	True	NA	49	True	AATATA	-17	NA	61362283	61348753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
transcript_16111.known	chr11	-	2584	7	FSM	ENSG00000162144.10	ENST00000294072.9	2584	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	37.9809893967437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-61361035	True	NA	-2	True	ATTAAA	-17	NA	61361882	61348804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_16112.known	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	29.9666481275434	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	-61361900	False	NA	-35	True	NA	NA	NA	61361913	61348837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_16113.nic	chr11	+	1067	6	FSM	ENSG00000149483.13	ENST00000688279.1	1073	6	6	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	66.6861304920296	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	61359797	True	NA	NA	False	AATAAA	-21	NA	61362366	61369211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364316_61364432_61364519_61366044_61366217_61367922_61367999_61368596
transcript_1612.known	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	86.9120387480287	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-23797065	True	NA	-8	True	AATAAA	-22	NA	23800754	23795598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_16121.known	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	23.7907545067406	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	61359804	True	NA	23	True	AATAAA	-33	NA	61362373	61369509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
transcript_16126.known	chr11	+	1134	4	FSM	ENSG00000149483.13	ENST00000692785.1	1932	4	234	564	1	-168	multi-exon	FALSE	canonical	3	193	junction_3	13.3666251038423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCCCACAGCAGCAGT	61359817	True	NA	NA	False	NA	NA	NA	61362386	61368583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922
transcript_16128.known	chr11	+	611	2	ISM	ENSG00000149483.13	ENST00000534963.5	740	4	17	1755	0	-1755	intron_retention	FALSE	canonical	3	215	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGCTTAAGCCCAGG	61359791	True	NA	NA	False	NA	NA	NA	61362360	61364802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_61362421_61364251
transcript_16133.known	chr11	+	1053	5	FSM	ENSG00000187049.11	ENST00000515837.7	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	161.185452197151	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTGCAGCCTTTCCT	61388442	True	NA	17	True	AATAAA	-17	NA	61392586	61398846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_16134.nic	chr11	+	1143	5	NIC	ENSG00000187049.11	novel	1090	5	NA	NA	-4	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	154.937084005089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	61388438	True	NA	34	True	AATAAA	-34	NA	61392582	61398863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61392680_61393230_61393333_61393883_61393977_61397727_61397976_61398260
transcript_16135.known	chr11	+	908	5	FSM	ENSG00000187049.11	ENST00000398979.7	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.846311297996	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATAGGGAGGGGCAAGGT	61392382	False	NA	NA	False	NA	NA	NA	61392392	61398493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61392680_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_16148.known	chr11	-	3650	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	0	0	0	multi-exon	TRUE	canonical	3	166	junction_5	85.7230683331181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	63	True	AATAAA	-23	NA	61430031	61402648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_16149.known	chr11	-	3487	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	68.3017994087208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-61422958	True	NA	-17	True	AATAAA	-18	NA	61429975	61402728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_16161.known	chr11	+	559	5	FSM	ENSG00000167985.7	ENST00000537782.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	263.141953135565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGTTGAGCTGTGCT	61419051	True	NA	NA	False	AAAACA	-45	NA	61430124	61446059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438294_61438343_61445940
transcript_16168.known	chr11	+	1077	5	FSM	ENSG00000167985.7	ENST00000542794.5	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	245.297141238947	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTGCCACGAGAGGG	61418968	True	NA	110	True	NA	NA	NA	61430041	61446342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003_61438114_61445940
transcript_1617.nic	chr1	-	1545	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	91.1469143745415	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	NA	False	NA	-8	True	AATAAA	-22	NA	23800909	23795598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
transcript_16173.known	chr11	+	1186	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_3	47.377913278939	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	61419050	True	NA	18	True	ATTAAA	-20	NA	61430123	61446733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
transcript_16179.known	chr11	+	438	3	FSM	ENSG00000167985.7	ENST00000543265.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	239.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTATGATGGACGTT	61419070	True	NA	NA	False	NA	NA	NA	61430143	61446115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61437624_61437849_61445940
transcript_16182.known	chr11	+	835	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAATTATTAAAGCA	61419031	True	NA	-18	True	TTTAAA	-19	NA	61430104	61446697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61445940
transcript_16186.known	chr11	-	468	4	FSM	ENSG00000134825.16	ENST00000257262.12	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	3775.35246331018	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769029	True	NA	-4	True	AATAAA	-16	NA	61792601	61789129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789715_61789922_61790492_61790603_61792555
transcript_16190.known	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5881	junction_3	1484.71164428204	4767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	-61769027	True	NA	NA	False	NA	NA	NA	61792599	61788948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
transcript_16191.known	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	3434.3198259141	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769022	True	NA	-4	True	AATAAA	-16	NA	61792594	61789129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
transcript_16192.known	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	3449.25798783835	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769008	True	NA	-4	True	AATAAA	-16	NA	61792580	61789129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
transcript_16195.known	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	2860	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769044	True	NA	-4	True	AATAAA	-16	NA	61792616	61789129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61790374_61790603_61792555
transcript_16197.known	chr11	-	553	2	FSM	ENSG00000134825.16	ENST00000540434.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	5881	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGGAGCACCAGAGTC	-61769030	True	NA	NA	False	NA	NA	NA	61792602	61790096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61790603_61792555
transcript_16199.known	chr11	+	3091	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	0	0	0	0	multi-exon	FALSE	canonical	3	2595	junction_10	148.402624110813	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61814096	True	NA	21	True	AATAAA	-20	NA	61828299	61867354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_16200.known	chr11	-	4364	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	0	0	0	multi-exon	TRUE	canonical	3	872	junction_5	37.8952449098414	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTTGTAACCCATG	-61814828	True	NA	-17	True	AATAAA	-18	NA	61817003	61799626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
transcript_16202.known	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2625	junction_7	146.460461103557	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	61814076	True	NA	57	True	AATAAA	-8	NA	61828279	61864221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
transcript_16208.nic	chr11	+	1492	3	NIC	ENSG00000168496.4	novel	768	2	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_2	454.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAACCAAAATGTCATGT	61786091	True	NA	18	True	AATAAA	-8	NA	61792903	61797232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61793029_61795340_61796397_61796921
transcript_16209.known	chr11	+	360	3	FSM	ENSG00000134824.14	ENST00000522639.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATTTCTGAGAAAATAAT	61811475	False	NA	9	True	ATTAAA	-22	NA	61816402	61826512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61816427_61826031_61826138_61826282
transcript_1621.known	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	91.0881441242492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	-23797064	True	NA	-70	True	NA	NA	NA	23800753	23795660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_16210.known	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	61786098	True	NA	24	True	AATAAA	-14	NA	61792910	61797238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61793029_61795340
transcript_16211.known	chr11	+	776	2	FSM	ENSG00000168496.4	ENST00000535723.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAAGGCTGGCAAAGT	61786138	True	NA	NA	False	NA	NA	NA	61792950	61795856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61793211_61795340
transcript_16212.known	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	750.437745530804	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61811328	True	NA	21	True	AATAAA	-20	NA	61816255	61867354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_16217.nnic	chr11	-	882	5	NNC	ENSG00000167996.16	novel	825	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	6558.81365034867	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967443_61967479
transcript_16220.known	chr11	-	825	5	FSM	ENSG00000167996.16	ENST00000620041.4	825	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	6558.81365034867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967454_61967547
transcript_16221.known	chr11	-	1203	4	FSM	ENSG00000167996.16	ENST00000273550.12	1203	4	0	0	0	0	multi-exon	FALSE	canonical	3	14373	junction_2	587.209408038469	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGGGATTTTTATCT	-61826342	True	NA	NA	False	AATAAA	-18	NA	61967634	61964284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311
transcript_16222.known	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	134	junction_2	7232.84181125695	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
transcript_16223.known	chr11	+	1697	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	61967658	True	NA	NA	False	AAAACA	-13	NA	61967793	61969490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61967800_61969500
transcript_16227.known	chr11	+	2182	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.7717193237243	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	62333128	True	NA	NA	False	AATAAA	-11	NA	62337452	62393406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_16232.known	chr11	+	2270	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	120.577314984573	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGTGGTTGGGAGTC	62333123	True	NA	NA	False	AATAAA	-17	NA	62337447	62393412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_16236.known	chr11	+	1161	6	FSM	ENSG00000162174.12	ENST00000628829.2	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	99.0042423333465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	62333168	True	NA	NA	False	NA	NA	NA	62337492	62392568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_16242.known	chr11	+	639	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	26.4196896272458	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	62333170	True	NA	12	True	ATTAAA	-16	NA	62337494	62357201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
transcript_16244.known	chr11	+	535	4	FSM	ENSG00000162174.12	ENST00000526096.2	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	184.591440754982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTCAAAAGTAAGTCT	62333178	True	NA	-57	True	AAAAAG	-42	NA	62337502	62357132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337993_62338168_62356324_62356468_62356986
transcript_16245.nic	chr11	+	770	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	-7	36211	-7	0	5prime_fragment	FALSE	canonical	3	80	junction_1	156.313786979908	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	62333116	True	NA	12	True	ATTAAA	-16	NA	62337440	62357201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
transcript_16246.nic	chr11	+	558	3	ISM	ENSG00000162174.12	ENST00000534183.5	1177	4	-15	32622	-12	3	5prime_fragment	FALSE	canonical	3	44	junction_2	156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTTATCTACAGTTC	62333111	True	NA	15	True	ATTAAA	-19	NA	62337435	62357204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_62337575_62337966_62338168_62356986
transcript_1625.known	chr1	-	1801	10	FSM	ENSG00000117308.15	ENST00000481736.5	1801	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	95.2502875793591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-23797092	True	NA	-8	True	AATAAA	-22	NA	23800781	23795598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798731_23799365_23799437_23800711
transcript_16279.known	chr11	-	1446	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	0	0	0	multi-exon	FALSE	canonical	3	6531	junction_9	1547.36527166362	21264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	-62416091	True	NA	-11	True	ATTAAA	-23	NA	62573891	62559595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
transcript_16313.known	chr11	-	2705	9	FSM	ENSG00000149016.16	ENST00000476907.6	2705	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	35.2907565801585	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-62589381	True	NA	NA	False	AATAAA	-17	NA	62591523	62575051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_16331.known	chr11	-	2496	9	FSM	ENSG00000254772.10	ENST00000525340.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	10234	junction_8	691.016099667728	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	-62416060	True	NA	-18	True	ATTAAA	-16	NA	62573860	62559602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583
transcript_16332.known	chr11	+	862	3	FSM	ENSG00000149489.9	ENST00000534093.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGGATGGAAGCAA	62611749	True	NA	-7	True	NA	NA	NA	62611785	62615100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62611921_62614257_62614505_62614620
transcript_16333.nnic	chr11	+	867	3	NNC	ENSG00000149489.9	novel	584	2	NA	NA	189	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	62611938	False	NA	9	True	AATAAA	-15	NA	62611974	62615116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62612099_62614257_62614505_62614620
transcript_16334.known	chr11	+	1358	3	FSM	ENSG00000149489.9	ENST00000278833.4	1358	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	62613246	False	NA	9	True	AATAAA	-15	NA	62613256	62615116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62613872_62614257_62614505_62614620
transcript_16338.known	chr11	-	1452	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	47.4341649025257	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-62619927	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_16339.nnic	chr11	-	1442	5	NNC	ENSG00000149541.10	novel	1452	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	88.0209492109691	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-62619927	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621875
transcript_16340.known	chr11	-	1120	5	FSM	ENSG00000149541.10	ENST00000534026.5	1120	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	76.4852927038918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGGTGTTAGCCAGGA	-62619925	True	NA	NA	False	NA	NA	NA	62621984	62616066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62616241_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_16342.known	chr11	-	3906	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	367.263784628978	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTAGTCTGGATTCT	-62629165	True	NA	72	True	AATAAA	-19	NA	62646615	62624825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_16343.known	chr11	-	3835	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	282.204748097496	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-62629163	True	NA	69	True	AATAAA	-16	NA	62646613	62624828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_1635.known	chr1	-	1570	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	31.9491783931919	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	-23824022	True	NA	-8	True	ATTAAA	-21	NA	23825429	23801884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_16355.known	chr11	-	646	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_3	175.689751803823	2239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628992	True	NA	-1	True	AATAAA	-16	NA	62665210	62662816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
transcript_16356.known	chr11	+	1368	3	FSM	ENSG00000214756.8	ENST00000398922.6	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGGCCTAACCT	62665243	False	NA	NA	False	NA	NA	NA	62665308	62667397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665333_62665646_62665947_62666353
transcript_16357.known	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	110	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	62659955	True	NA	11	True	TATAAA	-33	NA	62665311	62668108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665333_62665646_62665947_62666395
transcript_16358.known	chr11	-	405	3	FSM	ENSG00000278615.5	ENST00000525675.1	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_2	158	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGCAAAAGAAGACAAAA	-62628973	True	NA	NA	False	NA	NA	NA	62665191	62663114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663334_62664848_62664974_62665130
transcript_16359.known	chr11	+	2870	2	FSM	ENSG00000214756.8	ENST00000529868.1	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTAGCTTCTGTAAC	62659956	True	NA	NA	False	NA	NA	NA	62665312	62668496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665333_62665646
transcript_16360.known	chr11	+	1927	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	0	1101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATTTCTGTGTTGTT	62660296	True	NA	NA	False	AATAAA	-20	NA	62671672	62673686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62671866_62671952
transcript_16361.known	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	62659979	False	NA	21	True	AATAAA	-17	NA	62665335	62665711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665300_62665700
transcript_16362.known	chr11	+	149	1	FSM	ENSG00000206597.1	ENST00000383870.1	149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCTCGGAGAAGGACAA	62660065	False	NA	0	True	NA	NA	NA	62665421	62665570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665400_62665600
transcript_16363.known	chr11	-	774	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	2792	junction_2	47.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628963	True	NA	-1	True	AATAAA	-16	NA	62665181	62662816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663160_62663235_62663334_62664848
transcript_16364.known	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	2	3	junction_6	1332.83432328753	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62655747	False	NA	-1	True	AATAAA	-16	NA	62671769	62662816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
transcript_16369.known	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	292.109948858683	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-62663059	True	NA	-115	True	NA	NA	NA	62679081	62676612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
transcript_16375.known	chr11	-	1134	9	FSM	ENSG00000162191.14	ENST00000301935.10	1134	9	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_5	68.6639233877587	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	-62663051	True	NA	-2	True	AATAAA	-19	NA	62679073	62676499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_16376.known	chr11	-	1110	9	FSM	ENSG00000162191.14	ENST00000529640.5	1110	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	327.24150103555	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATGCCTGACTCCTTC	-62663043	True	NA	-6	True	AATAAA	-15	NA	62679065	62676503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677938_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_16379.known	chr11	-	1291	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_4	68.6416307308309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	-62663033	True	NA	0	True	AATAAA	-21	NA	62679055	62676497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_16386.known	chr11	-	1257	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_4	73.404387345939	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTTCTGTACAT	-62663045	True	NA	-19	True	AATAAA	-2	NA	62679067	62676516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_1639.known	chr1	-	1354	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	93.7504074065222	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	-23824021	True	NA	-10	True	ATTAAA	-19	NA	23825428	23801886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_16395.known	chr11	-	1912	6	FSM	ENSG00000162191.14	ENST00000533476.5	1912	6	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	77.5577204409722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGACTCCTTCCTG	-62663051	True	NA	-3	True	AATAAA	-18	NA	62679073	62676500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_16396.known	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	150.64050578603	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62709405	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
transcript_16403.known	chr11	-	2777	11	FSM	ENSG00000168000.16	ENST00000682555.1	2777	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_7	158.902359957302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-62707575	False	NA	NA	False	NA	NA	NA	62707587	62689288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692716_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16406.known	chr11	-	1693	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	139.100287562607	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62706222	False	NA	-57	True	NA	NA	NA	62706234	62690294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
transcript_16408.known	chr11	-	1516	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	99.7569546447765	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62706332	False	NA	-57	True	NA	NA	NA	62706344	62690294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_16409.known	chr11	-	1440	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	139.944131709765	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	-62706332	False	NA	-77	True	NA	NA	NA	62706344	62690314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
transcript_1641.known	chr1	-	2011	6	FSM	ENSG00000117305.15	ENST00000513148.1	2011	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	33.8738837454461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGCAACAGAGGGAG	-23824009	True	NA	NA	False	NA	NA	NA	23825416	23809286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_16410.known	chr11	-	1710	11	FSM	ENSG00000168000.16	ENST00000360796.10	1710	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_10	92.2520460477707	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62704339	True	NA	-37	True	AATAAA	-19	NA	62707424	62690274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16419.known	chr11	-	3133	11	FSM	ENSG00000168000.16	ENST00000683025.1	3133	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	195.55878911468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-62707575	False	NA	NA	False	NA	NA	NA	62707587	62689288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62697092_62697229_62702467_62702550_62705300_62705618_62707108
transcript_16421.known	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	151.848773455698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62707575	False	NA	-37	True	AATAAA	-19	NA	62707587	62690274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16423.known	chr11	-	1793	11	FSM	ENSG00000168000.16	ENST00000682223.1	1793	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	153.657280985966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTTTCCCACCT	-62707575	False	NA	-107	True	AAGAAA	-18	NA	62707587	62690344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690621_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16431.known	chr11	-	1364	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	152.841077795625	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-62706303	False	NA	-38	True	AATAAA	-18	NA	62706315	62690275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_16433.nic	chr11	-	1709	10	NIC	ENSG00000168000.16	novel	1710	11	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_4	148.492507189279	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62707553	False	NA	-37	True	AATAAA	-19	NA	62707565	62690274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_1644.known	chr1	-	2043	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	13.2711133285641	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	-23867362	True	NA	12	True	AATAAA	-36	NA	23868290	23845076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
transcript_16447.known	chr11	+	864	3	FSM	ENSG00000162188.6	ENST00000294117.6	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCCTGTGTTAGAA	62707224	True	NA	4	True	AATAAA	-17	NA	62707675	62709201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62707916_62708294_62708395_62708677
transcript_1645.known	chr1	+	380	3	FSM	ENSG00000189266.13	ENST00000471915.5	380	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	529.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGGTATAACATTC	NA	False	NA	NA	False	NA	NA	NA	23959108	23961465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23959257_23960928_23961135_23961439
transcript_16450.known	chr11	-	512	4	FSM	ENSG00000168000.16	ENST00000470529.5	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	35.6121078036982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	NA	False	NA	-38	True	AATAAA	-18	NA	62691178	62690275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074
transcript_16458.nnic	chr11	+	1964	5	NNC	ENSG00000162222.14	novel	858	4	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	75.1365423745331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATTTAAGTATTTA	62726311	True	NA	NA	False	ATTAAA	-20	NA	62728470	62740285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287_62739146_62739892
transcript_16461.nic	chr11	+	905	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	68.9975844987828	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62727562	True	NA	21	True	AATATA	-14	NA	62728118	62738636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
transcript_16464.known	chr11	+	858	4	FSM	ENSG00000162222.14	ENST00000532583.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	62.0232931154811	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGCTTGAGAAATATA	62726482	False	NA	-12	True	AATACA	-16	NA	62728641	62738603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287
transcript_16468.known	chr11	+	1133	3	FSM	ENSG00000162222.14	ENST00000316461.9	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	30.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62726326	True	NA	21	True	AATATA	-14	NA	62728485	62738636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62729087_62735381_62735565_62738287
transcript_16469.known	chr11	+	346	1	FSM	ENSG00000162222.14	ENST00000601045.1	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTATTTATTTAATAA	NA	False	NA	NA	False	ATTAAA	-28	NA	62739947	62740293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62739900_62740300
transcript_16475.known	chr11	+	791	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_2	75.6339196122901	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750075	True	NA	15	True	TATAAA	-17	NA	62761579	62766710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16476.known	chr11	+	919	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	439.576326635973	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGTTCTAAGTATAA	62750075	True	NA	-22	True	NA	NA	NA	62761579	62766673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16477.known	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	342.071832937015	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750112	True	NA	15	True	TATAAA	-17	NA	62761616	62766710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16478.known	chr11	+	868	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	81.6938730192717	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750132	True	NA	15	True	TATAAA	-17	NA	62761636	62766710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16479.known	chr11	+	1053	8	FSM	ENSG00000168002.12	ENST00000524819.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	397.307622553074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGGTTCTCATGGAA	62750078	True	NA	0	True	TATAAA	-2	NA	62761582	62766695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62762185_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_1648.known	chr1	+	814	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	510	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGTTTAAATTTA	23938631	True	NA	NA	False	TATAAA	-3	NA	23959827	23961880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23959999_23960932_23961135_23961439
transcript_16480.known	chr11	+	710	6	FSM	ENSG00000168002.12	ENST00000526368.1	710	6	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_1	64.6393069269775	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGTGTTATCTTCT	62751249	False	NA	12	True	TATAAA	-14	NA	62762753	62766707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16483.known	chr11	+	1043	5	FSM	ENSG00000185475.11	ENST00000333449.9	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	14.9227175809234	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGTTACTCCATTC	62783358	True	NA	39	True	AATGAA	-20	NA	62787401	62790400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789600_62789680_62789885
transcript_16485.nnic	chr11	+	829	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	149.56102433455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783315	True	NA	26	True	NA	NA	NA	62787358	62790246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62787528_62789125_62789211_62789291_62789427_62789600_62789680_62789885
transcript_16491.known	chr11	+	797	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	170.411919249277	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783371	True	NA	26	True	NA	NA	NA	62787414	62790246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
transcript_16503.known	chr11	-	1273	2	FSM	ENSG00000168569.8	ENST00000307366.8	1273	2	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	0	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGGGTGGCTTCAGAC	-62787768	True	NA	NA	False	NA	NA	NA	62792006	62789970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62790916_62791678
transcript_16504.known	chr11	-	487	1	FSM	ENSG00000267811.1	ENST00000596071.1	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTTGATTTTCTTTGTC	NA	False	NA	1	True	AATAAA	-15	NA	62771606	62771119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62771100_62771600
transcript_16506.nic	chr11	-	2343	21	NIC	ENSG00000162231.14	novel	2290	21	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	37.6628464139396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-62805520	False	NA	-12	True	TATAAA	-14	NA	62805535	62792129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_16508.known	chr11	-	2290	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_11	17.2669481959031	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-62804046	True	NA	-12	True	TATAAA	-14	NA	62805440	62792129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_16517.known	chr11	-	1785	11	FSM	ENSG00000162236.13	ENST00000377897.8	1785	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56.8542874372725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGTCATCATTTCT	-62832025	False	10760	-2	True	NA	NA	NA	62832041	62806896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807667_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_16518.known	chr11	-	1719	11	FSM	ENSG00000162236.13	ENST00000491231.5	1719	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	56.5406048782643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGTTTTCTCCCAATTA	-62832026	False	10760	-42	True	NA	NA	NA	62832042	62806936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825024_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_16519.known	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	55.3584681868998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	-62832026	False	10760	-30	True	NA	NA	NA	62832042	62806924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
transcript_16520.known	chr11	-	1794	11	FSM	ENSG00000162236.13	ENST00000294179.8	1794	11	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	12.6317061397105	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGCAGCGAGTGGAG	-62832035	False	10760	35	True	NA	NA	NA	62832051	62806859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_16525.nnic	chr11	-	1357	11	NNC	ENSG00000162236.13	novel	934	8	NA	NA	-46	384	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	55.1007259480308	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGGGAGTAATAAAGGC	-62832081	False	NA	NA	False	AATAAA	-23	NA	62832097	62823530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_62823817_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_16528.known	chr11	-	1366	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	170.866242210896	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	-62840140	False	NA	-6	True	AATAAA	-14	NA	62840156	62832911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
transcript_16534.known	chr11	-	191	1	FSM	ENSG00000222328.1	ENST00000410396.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGGGGAGAGAACAACCG	NA	False	NA	NA	False	NA	NA	NA	62841809	62841618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62841600_62841800
transcript_16535.known	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_6	27.343006418461	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828830	True	NA	-5	True	AATAAA	-15	NA	62839590	62832910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_16536.known	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	175.56476769079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828821	True	NA	-5	True	AATAAA	-15	NA	62839581	62832910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_16539.nic	chr11	-	897	12	FSM	ENSG00000255717.8	ENST00000539303.6	897	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	68.7531216421276	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846784	True	NA	-48	True	AATAAA	-16	NA	62855886	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16554.known	chr11	-	1117	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	9	0	0	multi-exon	FALSE	canonical	3	88	junction_10	48.1257727210691	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-62846784	True	NA	-47	True	AATAAA	-17	NA	62855886	62851986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16556.nnic	chr11	-	1255	11	NNC	ENSG00000255717.8	novel	897	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	70.7675066679617	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846784	True	NA	-48	True	AATAAA	-16	NA	62855886	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855606_62855864
transcript_16557.known	chr11	-	1394	11	FSM	ENSG00000255717.8	ENST00000540725.6	1394	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	70.7675066679617	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855746_62855864
transcript_16571.nic	chr11	-	1111	10	FSM	ENSG00000255717.8	ENST00000686500.1	1073	10	-46	8	0	0	multi-exon	FALSE	canonical	3	27	junction_7	76.2895718000311	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	NA	False	NA	-48	True	AATAAA	-16	NA	62855932	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855423_62855467_62855864
transcript_16575.known	chr11	-	1438	10	FSM	ENSG00000255717.8	ENST00000653690.1	1438	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	50.6866432353646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	-62846783	True	NA	-61	True	AATAAA	-3	NA	62855885	62852000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16577.nic	chr11	-	1068	10	FSM	ENSG00000255717.8	ENST00000537869.6	1069	10	0	1	0	0	multi-exon	FALSE	canonical	3	36	junction_5	73.7548491814455	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16586.known	chr11	-	1320	10	FSM	ENSG00000255717.8	ENST00000663092.1	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	47.6027802902102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGACTGGCTGTCAA	NA	False	NA	-121	True	AAAAAG	-5	NA	62855953	62852060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16597.known	chr11	-	780	9	FSM	ENSG00000255717.8	ENST00000542112.5	780	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	98.2534191517018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGTAAACTACTGACCT	NA	False	NA	NA	False	NA	NA	NA	62855914	62852257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855864
transcript_16603.nic	chr11	-	1017	9	FSM	ENSG00000255717.8	ENST00000686081.1	1018	9	0	1	0	0	multi-exon	TRUE	canonical	3	27	junction_6	93.6575377372265	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62855132_62855217_62855423_62855467_62855864
transcript_16606.known	chr11	-	1782	9	FSM	ENSG00000255717.8	ENST00000667655.1	1782	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	53.4460884911141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	NA	False	NA	-61	True	AATAAA	-3	NA	62855927	62852000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16613.known	chr11	-	1785	9	FSM	ENSG00000255717.8	ENST00000660547.1	1785	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	50.1346624103524	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	-62846784	True	NA	-50	True	AATAAA	-14	NA	62855886	62851989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16635.known	chr11	-	1158	1	FSM	ENSG00000255717.8	ENST00000668048.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62844043	False	NA	-48	True	AATAAA	-16	NA	62853145	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852000_62853100
transcript_16636.known	chr11	-	897	11	FSM	ENSG00000255717.8	ENST00000541578.6	897	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.3404294270255	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846386	False	NA	-48	True	AATAAA	-16	NA	62855488	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_16637.known	chr11	-	1513	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	28.1547750483766	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_16638.known	chr11	-	1689	9	FSM	ENSG00000255717.8	ENST00000544550.6	1689	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	28.5263036511918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTACATAGTCCTGTTT	-62846735	True	NA	-59	True	AATAAA	-5	NA	62855837	62851998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_16639.known	chr11	-	1112	8	FSM	ENSG00000255717.8	ENST00000670323.1	1112	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	20.0387379943988	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62845981	False	NA	-48	True	AATAAA	-16	NA	62855083	62851987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887
transcript_16643.nic	chr11	+	2377	13	NIC	ENSG00000168003.18	novel	2334	13	NA	NA	45	0	intron_retention	FALSE	canonical	3	195	junction_3	765.916589598516	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	62841830	True	NA	26	True	AATAAA	-21	NA	62856048	62888860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_62856382_62870744_62870838_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16644.known	chr11	+	2334	13	FSM	ENSG00000168003.18	ENST00000538084.2	2334	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	773.674332146429	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841890	True	NA	46	True	AATAAA	-41	NA	62856108	62888880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16646.known	chr11	+	2222	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	762.208166616049	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	62841892	True	NA	26	True	AATAAA	-21	NA	62856110	62888860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16648.known	chr11	+	2197	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	716.324179808634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841892	True	NA	46	True	AATAAA	-41	NA	62856110	62888880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16649.known	chr11	+	2161	12	FSM	ENSG00000168003.18	ENST00000377890.6	2161	12	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	621.516487151912	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGTGAACCCCCAA	62841883	True	NA	16	True	TTTAAA	-23	NA	62856101	62888793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16650.known	chr11	+	2084	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	573.772263184619	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	62841949	True	NA	41	True	AATAAA	-36	NA	62856167	62888875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16653.known	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	611.37903217861	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	62841925	True	NA	19	True	AATAAA	-14	NA	62856143	62888853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16655.known	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	156.857369527224	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62873419	True	NA	46	True	AATAAA	-41	NA	62880895	62888880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_1666.known	chr1	-	1808	6	FSM	ENSG00000188529.15	ENST00000453840.7	1808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	596.572543786588	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTT	-23943649	True	NA	-2	True	AATAAA	-23	NA	23980296	23966444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_16662.known	chr11	+	2265	11	FSM	ENSG00000168003.18	ENST00000680729.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	771.981191480725	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841785	True	NA	46	True	AATAAA	-41	NA	62856003	62888880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881880_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16663.known	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_1	161.620240195392	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	62881136	True	NA	11	True	AATAAA	-6	NA	62881698	62888845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16664.known	chr11	+	1929	9	FSM	ENSG00000168003.18	ENST00000680610.1	1929	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	661.599659442929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGTGAAGTCTTCCCT	62873386	True	NA	15	True	AATAAA	-10	NA	62880862	62888849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888112_62888219_62888330
transcript_16665.known	chr11	+	1917	9	FSM	ENSG00000168003.18	ENST00000681232.1	1917	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	691.858863858808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62873419	True	NA	46	True	AATAAA	-41	NA	62880895	62888880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881448_62881880_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16666.known	chr11	+	1413	9	FSM	ENSG00000168003.18	ENST00000536981.6	1413	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	691.536141047596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62881136	True	NA	46	True	AATAAA	-41	NA	62881698	62888880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881759_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16667.known	chr11	+	749	3	FSM	ENSG00000257002.1	ENST00000543624.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	62909281	True	NA	16	True	AATAAA	-16	NA	62909545	62918361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62909616_62910602_62910846_62917925
transcript_16668.nnic	chr11	+	1123	3	NNC	ENSG00000257002.1	novel	749	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	62909262	True	NA	16	True	AATAAA	-16	NA	62909526	62918361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62909971_62910602_62910846_62917925
transcript_16669.known	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63491150	False	NA	-4	True	ATTAAA	-16	NA	63491167	63461403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
transcript_16670.known	chr11	-	1166	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGACCCACAGACTCTC	-63491177	False	NA	NA	False	AATATA	-6	NA	63491194	63463336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
transcript_16674.known	chr11	-	2599	4	FSM	ENSG00000168004.10	ENST00000536887.5	2599	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.1430919496424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63490521	True	NA	-4	True	ATTAAA	-16	NA	63490939	63461403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63490242_63490334_63490886
transcript_16676.known	chr11	+	1425	9	FSM	ENSG00000133317.16	ENST00000340246.10	1425	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	3.13996417177012	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTCTCATCTAGCAA	63506331	False	NA	NA	False	AATAAA	-20	NA	63506362	63516774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63506528_63508552_63508642_63508774_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_1668.known	chr1	-	866	6	FSM	ENSG00000188529.15	ENST00000374453.7	866	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	666.250283302004	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAAGGTGCTGCAGT	-23943647	True	NA	-128	True	AAAAAG	-34	NA	23980294	23967617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967957_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_16680.known	chr11	+	758	4	FSM	ENSG00000133321.11	ENST00000255688.8	758	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	63536792	False	NA	5	True	AATAAA	-19	NA	63536807	63546458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63536878_63539515_63539625_63544620_63544890_63546148
transcript_16684.known	chr11	-	1075	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_4	316.133278855612	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCGGCTATAAGGAAATT	-63603103	True	NA	NA	False	AAAAAG	-1	NA	63614433	63574461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
transcript_16688.known	chr11	-	678	4	FSM	ENSG00000176485.13	ENST00000394613.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	614.513538409764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATAAGGCTTATTTT	-63614124	False	NA	8	True	NA	NA	NA	63614158	63574849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63575047_63590099_63590369_63598060_63598114_63613999
transcript_16690.known	chr11	-	2594	4	FSM	ENSG00000176485.13	ENST00000323646.9	2594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_3	76.1883630659346	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATACATTCAAAATATAA	-63603039	True	NA	NA	False	ATTAAA	-29	NA	63614369	63573194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999
transcript_16693.known	chr11	-	6899	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_7	18.891503087073	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTGTTTTCTTTC	-63671328	False	140	-11	True	AATAAA	-14	NA	63671376	63624086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
transcript_16695.nnic	chr11	-	963	5	NNC	ENSG00000184743.13	novel	6899	13	NA	NA	35412	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5544163797266	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTCTTTTCCTTGCTGT	NA	False	NA	-29	True	ATTAAA	-23	NA	63635964	63629121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63635846
transcript_16700.known	chr11	+	2532	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	0	0	0	0	multi-exon	FALSE	canonical	3	1800	junction_6	90.9183088760943	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	63659740	True	NA	34	True	AATAAA	-15	NA	63681499	63759885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_16706.known	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	785.458337532934	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	63659686	True	NA	31	True	AATAAA	-12	NA	63681445	63759882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
transcript_16715.known	chr11	+	992	5	FSM	ENSG00000133318.14	ENST00000536011.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	997.893625342902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTCAGCACTAGTCT	63659740	True	NA	NA	False	AATGAA	-24	NA	63681499	63758543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63753068_63753139_63753661_63753709_63758155
transcript_16717.known	chr11	+	1407	4	FSM	ENSG00000133318.14	ENST00000354497.4	1407	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	892.575424761901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAATAACCTGCA	63659813	True	NA	-24	True	AATAAA	-36	NA	63681572	63759089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63756111_63756171_63758155
transcript_1672.known	chr1	-	2917	6	FSM	ENSG00000188529.15	ENST00000343255.9	2917	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	601.9014537281	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGATTAACTGGAAT	-23943680	True	NA	NA	False	AATAAA	-14	NA	23980327	23969082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_16721.nnic	chr11	+	858	9	NNC	ENSG00000110583.13	novel	3649	8	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	71.4282857137143	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936460	True	NA	11	True	AATAAA	-15	NA	63938969	63957319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63956364_63956434_63957229
transcript_16723.known	chr11	+	3649	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	22.8749930299978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936492	True	NA	11	True	AATAAA	-15	NA	63939001	63957319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_16727.known	chr11	+	958	7	FSM	ENSG00000110583.13	ENST00000534965.5	958	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	56.1129812669641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGAAAGGGAGAGGG	63936486	True	NA	NA	False	NA	NA	NA	63938995	63954675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63939103_63945839_63945936_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_16729.known	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_8	34.035863438438	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-64162898	True	NA	-6	True	AATAAA	-16	NA	64166113	63998557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_16730.known	chr11	-	1214	10	FSM	ENSG00000133315.12	ENST00000675777.1	1214	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	101.181660369168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTACTGTC	-64162898	True	NA	-14	True	AATAAA	-8	NA	64166113	63998565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63998688_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_16734.nnic	chr11	-	503	4	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	157.117790208493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-63999300	False	NA	-6	True	AATAAA	-16	NA	63999426	63998557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_63998688_63998837_63998873_63998954_63999197_63999330
transcript_16737.known	chr11	-	431	3	FSM	ENSG00000133315.12	ENST00000542105.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	-63999096	False	NA	-8	True	AATAAA	-14	NA	63999222	63998559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63998688_63998837_63998873_63998954
transcript_16738.known	chr11	-	459	5	FSM	ENSG00000133315.12	ENST00000542359.5	459	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	140.266487444436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCATCTAAATCATGAC	-64165760	False	NA	-3	True	AATAAA	-19	NA	64165775	64009012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64009144_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_16741.known	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	739.587497640858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	63986657	True	NA	NA	False	NA	NA	NA	63986841	63997850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_16749.known	chr11	+	494	2	FSM	ENSG00000176340.4	ENST00000314133.4	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	4013	junction_1	0	2245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	63926683	True	NA	48	True	AATAAA	-17	NA	63974619	63976543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63974795_63976224
transcript_16750.known	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1801	junction_4	244.811775769785	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	63963492	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_16751.known	chr11	+	553	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	1142.0710232828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGTGGAAACAGTAT	63963523	True	NA	NA	False	AATAAA	-37	NA	63986468	63990632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
transcript_16757.known	chr11	+	2140	14	FSM	ENSG00000168439.17	ENST00000305218.9	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_8	227.157844659903	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGGCCTTGAGTG	64152245	True	NA	21	True	AATAAA	-25	NA	64186170	64204543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_16759.known	chr11	+	1900	14	FSM	ENSG00000168439.17	ENST00000538945.5	1900	14	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_2	853.988165598475	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTATTTGGGGCA	64152278	True	NA	3	True	NA	NA	NA	64186203	64204408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64186271_64193077_64193288_64194260_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_16792.known	chr11	-	968	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	130.552515041547	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATCATCCTGTAGCT	-64222968	True	NA	-19	True	TATAAA	-45	NA	64226186	64223815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_16794.nic	chr11	-	863	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	116.964498364038	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAGAACTCGTTTG	NA	False	NA	-45	True	AATAAA	-34	NA	64226248	64223841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
transcript_16799.known	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	141.008273988916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	-64222932	True	NA	-2	True	AAAAAG	-45	NA	64226150	64223798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
transcript_1680.known	chr1	-	1089	5	FSM	ENSG00000188529.15	ENST00000484146.6	1089	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	744.178741969965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATGCAGTTTACATC	-23943709	True	NA	NA	False	NA	NA	NA	23980356	23967172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967724_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_16803.nic	chr11	+	1005	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	114.300656166096	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	NA	False	NA	37	True	AATAAA	-17	NA	64226248	64230016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_16808.nic	chr11	+	906	5	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	146.547560539232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	NA	False	NA	37	True	AATAAA	-17	NA	64226248	64230016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64226298_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_16813.known	chr11	+	1071	3	FSM	ENSG00000149761.9	ENST00000535000.1	1071	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	64221323	True	NA	4	True	NA	NA	NA	64226289	64229983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64227133_64229477_64229572_64229849
transcript_16815.known	chr11	+	1110	6	FSM	ENSG00000149761.9	ENST00000279206.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	43.2222165095683	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	64221307	True	NA	37	True	AATAAA	-17	NA	64226273	64230016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64226428_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_16816.known	chr11	+	986	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	115.285244068788	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	64221323	True	NA	28	True	AATAAA	-8	NA	64226289	64230007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_16817.known	chr11	+	1288	7	FSM	ENSG00000110011.14	ENST00000321685.7	1288	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.5111575304707	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64225311	False	NA	13	True	AATAAA	-13	NA	64230277	64234281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64230320_64230431_64230941_64231870_64231965_64232429_64232615_64232703_64232866_64233893_64233981_64234072
transcript_16818.known	chr11	+	1015	5	FSM	ENSG00000110011.14	ENST00000321460.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	69.9160210538329	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64230727	False	NA	13	True	AATAAA	-13	NA	64230757	64234281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893
transcript_16819.known	chr11	+	1805	7	FSM	ENSG00000173511.10	ENST00000309422.7	1805	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	18.9186856484975	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	64232391	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237419_64237656_64238355
transcript_16821.known	chr11	+	574	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	224.085162382519	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226090	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16822.nnic	chr11	+	679	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_1	449.845484583318	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64225950	True	NA	18	True	AAAACA	-39	NA	64240954	64244132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16824.known	chr11	+	1655	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	445.521985989468	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226090	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16827.known	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	493.549187011791	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	64226151	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16831.known	chr11	+	611	6	FSM	ENSG00000173486.14	ENST00000652094.1	611	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.72243427183	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAAGGAGTAAGCCTG	64240424	False	NA	10	True	AAAACA	-31	NA	64241664	64244124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241748_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16833.known	chr11	+	705	5	FSM	ENSG00000173486.14	ENST00000541388.1	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	237.664022308805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	64226069	True	NA	-11	True	AAAACA	-10	NA	64241073	64244103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241133_64242383_64242559_64243198_64243498_64243840_64243877_64243967
transcript_16838.nnic	chr11	-	1006	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-2569	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	2608.56720996199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTTATATTGACTC	-64248694	False	818	-16	True	ATTAAA	-14	NA	64249512	64244548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64249383
transcript_16840.known	chr11	-	989	4	FSM	ENSG00000173457.11	ENST00000309318.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	5226	junction_1	72.3709579565972	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-64215871	True	NA	-5	True	AATAAA	-28	NA	64246943	64244478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415
transcript_16842.nic	chr11	-	683	3	ISM	ENSG00000257086.1	ENST00000545800.1	853	4	-78	938	-78	-938	5prime_fragment	FALSE	canonical	3	65	junction_2	24.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCGCCGTCGGCTTA	-64248754	False	818	-4	True	AATAAA	-15	NA	64249572	64247876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_64248173_64248400_64248599_64249383
transcript_16843.nnic	chr11	-	638	3	NNC	ENSG00000257086.1	novel	853	4	NA	NA	-3102	-938	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	45.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCGCCGTCGGCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	64252596	64247876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_64248173_64248400_64248599_64252452
transcript_16844.known	chr11	+	431	2	FSM	ENSG00000256940.3	ENST00000538355.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGATTAAATAGGAAAA	64246840	True	NA	-14	True	AATGAA	-39	NA	64247053	64248177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64247260_64247952
transcript_16845.nic	chr11	+	1706	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	398	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	63.4642756652456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64270204	False	NA	17	True	AATAAA	-19	NA	64270459	64289494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64270662_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_16847.nic	chr11	+	2085	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	52.1109491413097	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284187	True	NA	17	True	AATAAA	-19	NA	64284799	64289494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_16848.nic	chr11	+	1976	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	63.4681343796448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64284187	True	NA	14	True	AATAAA	-16	NA	64284799	64289491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_1685.known	chr1	-	778	4	FSM	ENSG00000188529.15	ENST00000473858.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	310.274430500198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTATGGTCCAATATA	-23943684	True	NA	NA	False	NA	NA	NA	23980331	23967300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23980190
transcript_16852.nnic	chr11	+	1886	8	NNC	ENSG00000173264.15	novel	2166	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	58.9891031099328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284887	True	NA	17	True	AATAAA	-19	NA	64285852	64289494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_64286235_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_16858.known	chr11	+	1478	7	FSM	ENSG00000173264.15	ENST00000377702.8	1478	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	71.1164928519085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284644	False	NA	17	True	AATAAA	-19	NA	64285256	64289494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288339_64288469_64288602_64288722_64289036
transcript_16862.known	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	26.8850433430105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284882	True	NA	17	True	AATAAA	-19	NA	64285847	64289494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_16863.known	chr11	+	1485	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	52.2230791891861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64285454	False	NA	14	True	AATAAA	-16	NA	64286419	64289491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_16871.known	chr11	-	631	5	FSM	ENSG00000002330.14	ENST00000394531.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	149.300870727535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGATCGGAACTTGGGC	-64281356	True	NA	NA	False	NA	NA	NA	64284653	64270255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64270338_64271612_64271804_64276903_64277044_64284181_64284377_64284630
transcript_16872.known	chr11	-	929	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	53.8784640546563	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281368	True	NA	-3	True	AATAAA	-19	NA	64284665	64269829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
transcript_16874.known	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	14.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281342	True	NA	-3	True	AATAAA	-19	NA	64284639	64269829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64270338_64271612_64271804_64284181
transcript_16875.known	chr11	+	917	4	FSM	ENSG00000219435.6	ENST00000539943.1	917	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGAGTCAGTGCAGGAC	NA	False	NA	8	True	AATAAA	-16	NA	64300445	64304770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64300988_64303481_64303562_64303772_64303840_64304542
transcript_16877.known	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	129.851196888336	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	64305916	True	NA	23	True	AATATA	-19	NA	64306226	64316743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
transcript_16883.known	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	2307.57727690513	4374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-64254771	True	NA	-11	True	ATTAAA	-12	NA	64317558	64316694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
transcript_16884.known	chr11	-	812	4	FSM	ENSG00000173113.7	ENST00000544844.6	812	4	0	0	0	0	multi-exon	TRUE	canonical	3	4956	junction_3	86.259299015623	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTATTGCTTCAAGG	-64254772	True	NA	64	True	GGGGCT	-10	NA	64317559	64316459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64316969_64317057_64317148_64317263_64317366_64317448
transcript_16885.known	chr11	-	659	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	4956	junction_2	99.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCGGTTTCTCTTTGC	-64254766	True	NA	-12	True	ATTAAA	-11	NA	64317553	64316695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64317148_64317263_64317366_64317448
transcript_16886.known	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	5155	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	-64254723	True	NA	-7	True	ATTAAA	-16	NA	64317510	64316690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64317148_64317263
transcript_16893.known	chr11	+	860	6	FSM	ENSG00000126432.14	ENST00000265462.9	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	2920	junction_3	297.362136123616	3819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	64291263	True	NA	18	True	AATAAA	-20	NA	64318120	64321811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_16898.known	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	1468.75551062796	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	64291324	True	NA	-53	True	NA	NA	NA	64318181	64321740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
transcript_16900.nnic	chr11	+	819	5	NIC	ENSG00000126432.14	novel	860	6	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	3	269	junction_1	1402.86142847396	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	64317910	False	NA	18	True	AATAAA	-20	NA	64318026	64321811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64318387_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_16905.known	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	1548.48657296945	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	64291324	True	NA	-51	True	NA	NA	NA	64318181	64321742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
transcript_16907.nic	chr11	+	1103	3	ISM	ENSG00000168071.22	ENST00000301897.5	870	4	1139	8	-489	0	3prime_fragment	FALSE	canonical	3	46	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGAGTCTTGCTCTG	NA	False	NA	4	True	AATAAA	-12	NA	64354853	64357525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_64355401_64355559_64355629_64357038
transcript_16908.known	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	64355296	False	NA	10	True	AATAAA	-18	NA	64355342	64357531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64355629_64357038
transcript_1691.known	chr1	-	790	3	FSM	ENSG00000188529.15	ENST00000485292.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	712.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGTGATTGTGGTCT	-23943684	True	NA	NA	False	NA	NA	NA	23980331	23977789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23978274_23978652_23978818_23980190
transcript_16910.known	chr11	-	2983	16	FSM	ENSG00000068831.19	ENST00000377494.5	2983	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	54.347605487475	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64743766	False	NA	-1	True	AATAAA	-24	NA	64743789	64726910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64727132_64727295_64727364_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793
transcript_16912.nic	chr11	-	701	4	ISM	ENSG00000068831.19	ENST00000421556.5	2168	17	14126	0	5270	0	3prime_fragment	FALSE	canonical	3	42	junction_3	3.68178700572909	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64729977	False	NA	-1	True	AATAAA	-24	NA	64729996	64726910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761
transcript_16913.known	chr11	-	2174	4	FSM	ENSG00000068831.19	ENST00000394430.5	2174	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	5.90668171555645	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGAGGGTCATGTTG	-64744566	False	NA	-3	True	AATAAA	-15	NA	64744589	64740867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793
transcript_16914.known	chr11	-	453	3	FSM	ENSG00000068831.19	ENST00000394429.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	85	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64741349	True	NA	-1	True	AATAAA	-17	NA	64742937	64740865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64741080_64741438_64741534_64742793
transcript_16915.known	chr11	-	667	5	FSM	ENSG00000068831.19	ENST00000377486.7	667	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	72.2058688750437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64744122	False	NA	-1	True	AATAAA	-17	NA	64744145	64740865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744002
transcript_16916.known	chr11	-	583	5	FSM	ENSG00000068831.19	ENST00000377489.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.6378000768195	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64745310	True	NA	-1	True	AATAAA	-17	NA	64745333	64740865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
transcript_16917.known	chr11	-	2866	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	5.26631484267326	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTACTCCTCTTTGT	-64759355	True	NA	-10	True	AATAAA	-17	NA	64759974	64746397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
transcript_16918.known	chr11	-	2854	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	241.094840720871	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778731	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_16919.known	chr11	-	3282	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	106.613658703856	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64762499	True	NA	-22	True	AATAAA	-22	NA	64778542	64764605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_16921.known	chr11	-	2778	12	FSM	ENSG00000168066.21	ENST00000448404.5	2778	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	303.588265107108	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778731	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64776497_64776627_64778361
transcript_16925.known	chr11	-	983	2	FSM	ENSG00000168066.21	ENST00000463343.1	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGACAAAA	-64778747	False	NA	NA	False	NA	NA	NA	64778763	64776045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64776627_64778361
transcript_16926.known	chr11	-	752	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTTTATTAAGTCT	-64935785	False	NA	1	True	AATAAA	-17	NA	64935893	64934470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
transcript_16927.known	chr11	-	2066	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGCCTAGTTACTT	-64996861	True	NA	-2	True	AATAAA	-17	NA	64996971	64987944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64989813_64994447_64994550_64996875
transcript_16929.known	chr11	+	1908	8	FSM	ENSG00000110025.13	ENST00000377244.8	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	23.4076561694446	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTAATTCATTTAGTA	65026186	True	NA	16	True	AATAAA	-17	NA	65027438	65040572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65038571_65038830_65039685
transcript_16932.known	chr11	+	830	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	1342.06944678731	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987839	True	NA	19	True	AATAAA	-17	NA	65014179	65022184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
transcript_16937.known	chr11	+	932	5	FSM	ENSG00000213465.8	ENST00000246747.9	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_4	204.878470074335	2193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987819	True	NA	19	True	AATAAA	-17	NA	65014159	65022184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720
transcript_1694.nic	chr1	-	1042	6	ISM	ENSG00000185436.12	ENST00000374421.7	1476	7	-41	1722	0	148	5prime_fragment	FALSE	canonical	3	31	junction_1	18.744599222176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCCTTAAGTTCCTTT	-24186093	True	NA	NA	False	AATAAA	-24	NA	24187289	24158851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_16941.known	chr11	+	795	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	1673.59553058677	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCGCTCCTTGCC	64987851	True	NA	-5	True	NA	NA	NA	65014191	65022160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
transcript_16943.known	chr11	+	1228	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	3669	junction_1	54	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCCCCCATATACCCTT	64987830	True	NA	-79	True	AAAAAG	-32	NA	65014170	65019585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570
transcript_16945.known	chr11	-	800	5	FSM	ENSG00000168060.16	ENST00000526516.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.8613807855649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCACCCTGAGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	65047937	65045303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646
transcript_16946.known	chr11	-	566	4	FSM	ENSG00000168060.16	ENST00000532802.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.65685424949238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGCGGCAGCCACCCT	-65047812	True	NA	NA	False	NA	NA	NA	65047886	65045312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65047646
transcript_16947.known	chr11	+	755	3	FSM	ENSG00000168061.17	ENST00000533017.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGCAGAGGAGGAAGA	65040513	True	NA	NA	False	NA	NA	NA	65040940	65044673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65041107_65043024_65043165_65044224
transcript_16948.known	chr11	-	2475	6	FSM	ENSG00000146670.10	ENST00000275517.8	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	61.0868234564542	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTGTTTCTTTTATT	-65074688	True	NA	-5	True	ATTAAA	-18	NA	65084040	65077452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_16949.known	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_4	52.0978646395416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	-65074695	True	NA	NA	False	NA	NA	NA	65084047	65079087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_16952.nic	chr11	-	391	3	ISM	ENSG00000146670.10	ENST00000525464.1	672	7	12514	-65	12488	0	3prime_fragment	FALSE	canonical	2	5	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCTTCACCAAGTGT	-65066745	True	NA	NA	False	AATAAA	-13	NA	65066901	65066299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_65066474_65066551_65066680_65066812
transcript_16956.known	chr11	+	1578	10	FSM	ENSG00000149809.17	ENST00000279263.14	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	42.2859168687649	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104001	True	NA	20	True	AATGAA	-15	NA	65111871	65116230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_16958.known	chr11	+	1382	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	22.1082679150602	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	65081995	True	NA	NA	False	AATAAA	-18	NA	65084221	65088398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_16959.nic	chr11	+	1404	8	NIC	ENSG00000162300.13	novel	1382	8	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	83.1828573391299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	65081955	True	NA	NA	False	AATAAA	-18	NA	65084181	65088398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65084361_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_1696.known	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	2.82842712474619	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	-24186052	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
transcript_16960.nnic	chr11	+	1295	8	NNC	ENSG00000162300.13	novel	802	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	85.9266417073427	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	65084436	True	NA	NA	False	AATAAA	-18	NA	65084525	65088398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_65084596_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_16963.known	chr11	+	2094	8	FSM	ENSG00000149809.17	ENST00000530650.5	2094	8	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	38.3804797324082	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104031	False	NA	20	True	AATGAA	-15	NA	65111901	65116230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_16970.known	chr11	+	478	2	FSM	ENSG00000162300.13	ENST00000525509.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGAGTCTCCTCTGTGGC	65081996	True	NA	NA	False	AATAAA	-25	NA	65084222	65085012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65084379_65084690
transcript_16971.known	chr11	+	2551	7	FSM	ENSG00000162300.13	ENST00000650243.1	2551	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	89.7063109386526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTATTAAAACACCCGA	65081983	True	NA	NA	False	AATAAA	-5	NA	65084209	65088385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65084361_65084690_65084801_65085114_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_16972.known	chr11	-	1299	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTGCTTGTTTCTGA	-65117682	False	81804	-8	True	AATAAA	-15	NA	65117701	65116402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65116400_65117700
transcript_16973.known	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	27.9248197049785	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131019	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_16974.known	chr11	-	3038	16	FSM	ENSG00000162298.19	ENST00000377190.8	3038	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	25.779061270729	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131006	True	NA	-29	True	AATAAA	-16	NA	65134519	65127278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_16979.known	chr11	-	506	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	5602	junction_4	543.190114048479	7759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-65040330	True	NA	-4	True	AATAAA	-21	NA	65122134	65120629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
transcript_16982.known	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	359.188901090591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	65122163	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
transcript_16983.known	chr11	+	2026	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_2	38.8415584994561	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAACTCTTGTAACAC	65116862	True	NA	34	True	ATTAAA	-44	NA	65122320	65127371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
transcript_16986.known	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	2877.03937330645	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	-65040349	True	NA	-12	True	AATAAA	-13	NA	65122153	65120637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
transcript_16987.known	chr11	+	752	3	FSM	ENSG00000149792.9	ENST00000528529.1	752	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTTTAGTAGAGA	65116832	True	NA	NA	False	NA	NA	NA	65122290	65126302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122341_65125487_65125613_65125725
transcript_16988.known	chr11	+	518	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	398.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTGCTTGCATAAAGGA	65116852	True	NA	-28	True	NA	NA	NA	65122310	65126004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122425_65125487_65125613_65125725
transcript_16989.known	chr11	-	1484	1	FSM	ENSG00000149806.11	ENST00000531357.1	1484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGCATTGTTTCATCT	-65040313	True	NA	-8	True	AATAAA	-17	NA	65122117	65120633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120600_65122100
transcript_16990.known	chr11	-	697	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	6652	junction_3	191.31184548329	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-65122038	False	NA	-4	True	AATAAA	-21	NA	65122057	65120629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
transcript_16991.known	chr11	-	538	5	FSM	ENSG00000149806.11	ENST00000527548.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2947.70287681781	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	-65040309	True	NA	-5	True	AATAAA	-20	NA	65122113	65120630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122035
transcript_16992.known	chr11	+	3083	22	FSM	ENSG00000014216.16	ENST00000533820.5	3083	22	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	166.65951005043	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65181166	False	NA	21	True	AATAAA	-22	NA	65181193	65212006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65181411_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_16993.known	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	172.337510969246	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65181683	False	NA	16	True	AATAAA	-17	NA	65181744	65212001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_16994.known	chr11	+	2952	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	99.291047019057	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65174003	True	NA	21	True	AATAAA	-22	NA	65181927	65212006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_16996.nic	chr11	+	3151	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	174.980167324517	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65181963	False	NA	21	True	AATAAA	-22	NA	65182023	65212006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65182309_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_16999.nic	chr11	+	1416	10	ISM	ENSG00000014216.16	ENST00000279247.11	2952	22	-4	23100	-4	217	5prime_fragment	FALSE	canonical	3	410	junction_1	114.811923500035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATGCTTGACTCACCG	65181847	False	NA	11	True	ATTAAA	-20	NA	65181923	65188906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585
transcript_17.known	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00044_+_0_1100
transcript_170.known	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4288	junction_1	3154.16350876108	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
transcript_17003.known	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	53.0319714889047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	65180070	True	NA	2	True	AATAAA	-3	NA	65182461	65211987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17006.nic	chr11	+	1908	9	NIC	ENSG00000197847.12	novel	1939	10	NA	NA	-12	90	combination_of_known_junctions	FALSE	canonical	2	12	junction_8	4.2555111326373	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATTGACTCACAG	65213466	True	NA	23	True	TATAAA	-35	NA	65213827	65242445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65214254_65214325_65214430_65217534_65217689_65222472_65222597_65223464_65223581_65233149_65233365_65236408_65236518_65236684_65236889_65241989
transcript_1701.known	chr1	+	1676	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.9444950453169	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	24414802	True	NA	-22	True	ATTAAA	-1	NA	24415813	24466310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_17011.known	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	11.4894264615439	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	65260247	True	NA	11	True	AGTAAA	-21	NA	65261961	65298685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
transcript_17014.known	chr11	+	1963	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	65312734	True	NA	6	True	AATAAA	-15	NA	65314865	65322417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65314955_65320543
transcript_17016.known	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_4	66.0950830243824	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	65324156	True	NA	4	True	AATAAA	-18	NA	65333851	65354262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_17018.known	chr11	+	366	2	FSM	ENSG00000126391.14	ENST00000531296.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGAAGTCAGAGGCTC	65384553	True	NA	NA	False	AAGAAA	-28	NA	65386620	65387261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65386762_65387036
transcript_17019.known	chr11	+	3685	11	FSM	ENSG00000126391.14	ENST00000317568.10	3685	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	12.6111062163476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGCAGCTCATGATA	65384569	True	NA	NA	False	ATTAAA	-17	NA	65386636	65413525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65386762_65387036_65387122_65389360_65389529_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_17020.known	chr11	+	844	3	FSM	ENSG00000173727.13	ENST00000619960.4	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATAGCGCCGCGTGTTT	65455145	True	NA	NA	False	AATGAA	-7	NA	65455257	65456318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65455332_65455436_65455582_65455693
transcript_17023.known	chr11	-	693	2	FSM	ENSG00000279243.3	ENST00000622944.2	693	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCACGTGTCTTTACT	-65488153	False	NA	NA	False	AGTAAA	-16	NA	65488200	65487242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65487621_65487885
transcript_17024.known	chr11	+	2636	18	FSM	ENSG00000142186.18	ENST00000270176.10	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_13	57.3256948856065	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522193	True	NA	14	True	AATAAA	-13	NA	65525082	65538704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_17025.known	chr11	+	2570	18	FSM	ENSG00000142186.18	ENST00000533862.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	113.092912777129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522222	True	NA	14	True	AATAAA	-13	NA	65525111	65538704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65538003_65538183_65538269_65538325_65538441
transcript_17026.known	chr11	+	2583	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_13	77.4220447313336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522195	True	NA	14	True	AATAAA	-13	NA	65525084	65538704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_17028.known	chr11	-	614	1	FSM	ENSG00000260233.3	ENST00000567594.1	614	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGACCTTGGTGCTTTTT	-65570071	False	NA	NA	False	NA	NA	NA	65570273	65569659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65569700_65570300
transcript_17029.known	chr11	+	769	4	FSM	ENSG00000173465.8	ENST00000309328.8	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	129.68251831128	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGAGTTGAGCTTGT	65559266	True	NA	NA	False	NA	NA	NA	65570476	65571888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65570511_65570603_65570756_65570885_65570971_65571390
transcript_1703.known	chr1	+	5372	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.0271130167092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	24414790	True	NA	4	True	ATTAAA	-15	NA	24415801	24472976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
transcript_17031.nic	chr11	-	905	3	ISM	ENSG00000173338.13	ENST00000394217.6	1372	4	2046	0	-431	0	3prime_fragment	FALSE	canonical	1	1	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGCTATTTTCAACTAT	-65593879	True	NA	NA	False	CATAAA	-12	NA	65593950	65592854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_65593211_65593309_65593384_65593475
transcript_17034.known	chr11	-	2517	11	FSM	ENSG00000173039.20	ENST00000406246.8	2517	11	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_4	7.3729234364667	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	-65660605	True	NA	-23	True	AATAAA	-17	NA	65662916	65653600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_17035.known	chr11	+	824	5	FSM	ENSG00000285533.3	ENST00000648185.2	909	5	83	2	8	-2	multi-exon	FALSE	canonical	2	10	junction_1	8.57321409974112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662831	True	NA	10	True	AATAAA	-17	NA	65663085	65671716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130_65666218_65671422
transcript_17037.known	chr11	+	1697	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.89949493661167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCCATATT	65662751	True	NA	NA	False	NA	NA	NA	65663005	65667304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
transcript_17040.nnic	chr11	+	647	4	NIC	ENSG00000285533.3	novel	909	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	9.0921211313239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662751	True	NA	10	True	AATAAA	-17	NA	65663005	65671716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65663149_65665420_65665544_65666130_65666218_65671422
transcript_17043.known	chr11	+	2237	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_5	98.7564693409317	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711985	False	NA	23	True	AATAAA	-17	NA	65711995	65719604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17046.known	chr11	+	2059	13	FSM	ENSG00000172977.13	ENST00000352980.8	2059	13	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	58.0896696687305	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711879	True	NA	23	True	AATAAA	-17	NA	65712017	65719604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17052.known	chr11	+	2080	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	97.2358244452915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65708642	True	NA	23	True	AATAAA	-17	NA	65712251	65719604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17055.known	chr11	+	1697	12	FSM	ENSG00000172977.13	ENST00000530446.5	1697	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	42.1486938907271	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTCCAAGGTCAGCTG	65708629	True	NA	NA	False	NA	NA	NA	65712238	65719364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17058.known	chr11	-	2085	5	FSM	ENSG00000172922.11	ENST00000531596.6	2085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.071332565256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714317	True	NA	-48	True	NA	NA	NA	65720798	65717708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_17059.known	chr11	-	1750	5	FSM	ENSG00000172922.11	ENST00000644142.1	1750	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	164.840074011146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCATCATTTAACCAATA	-65714322	True	NA	-54	True	NA	NA	NA	65720803	65717714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65718823_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_17060.known	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_3	60.9061208381847	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	-65714317	True	NA	-12	True	AATAAA	-21	NA	65720798	65717672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
transcript_17061.known	chr11	+	1875	11	FSM	ENSG00000172977.13	ENST00000534650.5	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	43.0854963996006	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	65712579	True	NA	22	True	AATAAA	-16	NA	65712619	65719603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17062.known	chr11	+	2988	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	65786514	True	NA	22	True	ATTAAA	-14	NA	65787062	65797214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
transcript_17064.known	chr11	+	2364	16	FSM	ENSG00000172732.12	ENST00000308110.9	2364	16	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	20.7520815555666	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	65859370	True	NA	28	True	AATAAA	-39	NA	65860432	65866439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219_65865324_65865810_65865895_65865985
transcript_17065.known	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.94669341207154	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	65833828	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
transcript_1707.known	chr1	+	1757	8	FSM	ENSG00000001461.17	ENST00000358028.8	1757	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.8545815818308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGGCTTCTTTCACT	24414801	True	NA	NA	False	AATAAA	-22	NA	24415812	24454824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24454053
transcript_1708.known	chr1	-	2544	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	17.7913072101208	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	-24412794	True	NA	-7	True	ATTAAA	-16	NA	24413725	24357004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
transcript_17081.known	chr11	-	860	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4972.17942377608	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTTTTAACAACAT	-65856928	False	208980	-144	True	NA	NA	NA	65856964	65855053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
transcript_17082.known	chr11	-	962	4	FSM	ENSG00000172757.13	ENST00000527344.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4962.75140980843	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	-65856997	False	208980	-65	True	NA	NA	NA	65857033	65854974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856930
transcript_17084.known	chr11	-	1062	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	4898.16952204256	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCATGCTGCCAACTTC	-65857832	False	NA	-99	True	NA	NA	NA	65857868	65855008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
transcript_17085.known	chr11	-	1245	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	0	0	0	multi-exon	FALSE	canonical	3	10523	junction_1	20.1714870272097	7902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTGAGACGCCTTT	-65649200	True	NA	-35	True	NA	NA	NA	65858180	65854672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
transcript_17090.known	chr11	-	758	4	FSM	ENSG00000172757.13	ENST00000534769.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	4905.24053096957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATCCCAGCAGGGGGAG	NA	False	NA	NA	False	GGGGCT	-3	NA	65861421	65855240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65861256
transcript_17112.known	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10553	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	-65649214	True	NA	-46	True	ATTAAA	-3	NA	65858194	65854831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65856243_65858096
transcript_17113.known	chr11	-	1813	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	18.4094837219595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-65872302	True	NA	0	True	TATAAA	-21	NA	65872811	65866440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_17118.known	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	244.310367269904	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	NA	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_17122.known	chr11	-	1361	10	FSM	ENSG00000172500.13	ENST00000357519.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_5	51.492777870683	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTGTCTTGGTTTAT	-65880668	True	NA	-1	True	NA	NA	NA	65888471	65883739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_17130.known	chr11	-	1010	9	FSM	ENSG00000172500.13	ENST00000533037.5	1010	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	298.690789111415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCGGCTGCCTCCTGCGC	-65880687	True	NA	-111	True	NA	NA	NA	65888490	65884008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65887599_65887727_65887933_65888133_65888333
transcript_17144.known	chr11	-	1173	10	FSM	ENSG00000172500.13	ENST00000533045.5	1173	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	384.173507611622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATAAAGTTGCTCTGA	-65880711	True	NA	-50	True	NA	NA	NA	65888514	65883947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884509_65884602_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888342
transcript_17145.known	chr11	-	1559	2	FSM	ENSG00000175573.7	ENST00000449692.3	1559	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65918216_65918909
transcript_17146.known	chr11	+	695	7	FSM	ENSG00000175550.8	ENST00000525501.5	695	7	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_3	634.460838472758	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAAGAGGACGAAGAAG	65919255	False	NA	NA	False	NA	NA	NA	65919273	65921401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65919544_65919779_65919853_65919947_65919998_65920415_65920463_65920568_65920663_65920883_65920973_65921329
transcript_17147.known	chr11	+	819	7	FSM	ENSG00000175550.8	ENST00000376991.6	819	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	711.197991654457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCATAGCCCCTTTTA	65919316	False	NA	-85	True	NA	NA	NA	65919334	65921448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920547_65920663_65920883_65920973_65921329
transcript_17149.known	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_6	206.603014391261	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	65906492	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_17152.known	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_5	223.170248913246	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	65919534	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_17153.known	chr11	+	1925	8	FSM	ENSG00000175513.9	ENST00000532620.5	1925	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.48046975980333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	14	True	ATTAAA	-12	NA	65945444	65959963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65945823_65946879_65947017_65947109_65947829_65948000_65948149_65953566_65953738_65958882_65958983_65959189_65959315_65959816
transcript_17158.known	chr11	+	722	5	FSM	ENSG00000175513.9	ENST00000534740.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.7121426428143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	14	True	ATTAAA	-12	NA	65945643	65959963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65945823_65953566_65953738_65958882_65958983_65959189_65959315_65959816
transcript_17160.known	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66000076	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
transcript_17161.known	chr11	-	889	6	FSM	ENSG00000175376.9	ENST00000527249.5	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	38.0263066836631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCCCTGGCTCTTCT	-66000086	True	NA	NA	False	NA	NA	NA	66002176	65998566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66001909
transcript_17162.known	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000066	True	NA	0	True	AATAAA	-19	NA	66002156	65996544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
transcript_17163.known	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	43.3008083065432	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000067	True	NA	0	True	AATAAA	-19	NA	66002157	65996544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
transcript_17165.nic	chr11	-	1261	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-313	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	42.9213233719558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66002478	True	NA	-9	True	ATTAAA	-16	NA	66002489	65998432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_17175.known	chr11	+	731	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	2816	junction_1	579	2550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	65969626	True	NA	29	True	AATAAA	-18	NA	66002502	66004149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002571_66003234_66003374_66003625
transcript_17179.known	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1970	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	66002519	False	NA	11	True	NA	NA	NA	66002580	66004131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66003071_66003234_66003374_66003625
transcript_1718.known	chr1	+	931	2	FSM	ENSG00000001461.17	ENST00000488155.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGGCAGAGAAACACC	24414800	True	NA	NA	False	ATTAAA	-12	NA	24415811	24420128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290
transcript_17180.known	chr11	+	670	3	FSM	ENSG00000175334.8	ENST00000527348.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	2	293	junction_1	1840.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGGAGTTTTCTCCC	66001940	True	NA	NA	False	NA	NA	NA	66002781	66003898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66003040_66003234_66003374_66003625
transcript_17183.known	chr11	+	251	2	FSM	ENSG00000175334.8	ENST00000524663.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGGAATGGCTGAAAGACA	66002209	False	NA	NA	False	AAGAAA	-15	NA	66002315	66003678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002514_66003625
transcript_17185.known	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	65969603	True	NA	26	True	AATAAA	-15	NA	66002479	66004146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002571_66003625
transcript_17186.known	chr11	+	946	3	FSM	ENSG00000175334.8	ENST00000445560.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	1596.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	NA	False	NA	26	True	AATAAA	-15	NA	66002227	66004146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002514_66003234_66003374_66003625
transcript_17187.known	chr11	+	592	3	FSM	ENSG00000175315.3	ENST00000312134.3	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTTCCAAGTGCTT	66011962	True	NA	12	True	AATAAA	-22	NA	66012007	66013505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66012285_66012825_66012952_66013316
transcript_1719.nic	chr1	+	467	2	ISM	ENSG00000001461.17	ENST00000003912.7	5481	13	48136	3706	7773	2892	3prime_fragment	FALSE	canonical	3	50	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTCTAACTGAGAAC	24463656	True	NA	24	True	NA	NA	NA	24463938	24469270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24464121_24468985
transcript_17190.known	chr11	+	3272	22	FSM	ENSG00000087365.16	ENST00000322535.11	3272	22	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_4	218.725632915603	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCCTTGGGTTCAA	66020452	True	NA	NA	False	NA	NA	NA	66052363	66069308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_17194.known	chr11	+	3254	21	FSM	ENSG00000087365.16	ENST00000528302.5	3254	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	485.236581473409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCCTTGGGTTCAA	66020419	True	NA	NA	False	NA	NA	NA	66052330	66069308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_172.known	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1144_1987
transcript_17202.known	chr11	+	1163	10	FSM	ENSG00000087365.16	ENST00000530322.5	1163	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	563.002861646566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAAGGAGAGCACACTA	66020488	False	NA	NA	False	NA	NA	NA	66052399	66059044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057268_66057376_66058053_66058151_66058313_66058406_66058829
transcript_17207.known	chr11	+	1080	9	FSM	ENSG00000087365.16	ENST00000530981.1	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	708.964462702469	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	66060614	True	NA	24	True	AATAAA	-4	NA	66060690	66068878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067948_66068046_66068147_66068334_66068673
transcript_1721.known	chr1	+	2421	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.1357583773966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	24502086	True	NA	NA	False	NA	NA	NA	24502350	24536800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_17213.known	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_3	125.100775703561	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-66275628	True	NA	-4	True	NA	NA	NA	66289143	66284579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_17219.known	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	452.561843533259	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-66275630	True	NA	-4	True	NA	NA	NA	66289145	66284579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_1722.known	chr1	+	6863	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	10.7354552767919	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	24502571	False	NA	8	True	AATAAA	-23	NA	24502835	24541040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_17221.known	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_5	66.5714653586655	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	66259224	True	NA	32	True	AATAAA	-43	NA	66268638	66277492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
transcript_17225.known	chr11	+	991	5	FSM	ENSG00000174903.16	ENST00000527397.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	427.416292974426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTACTGCCCTGGCTG	66259175	True	NA	NA	False	NA	NA	NA	66268589	66276629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66275803_66275936_66276043
transcript_17227.known	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	111.641732981936	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-66341233	True	NA	-5	True	ATTAAA	-20	NA	66345119	66337332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17229.known	chr11	-	1424	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	23.7897166289124	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	-66341218	True	NA	-11	True	ATTAAA	-14	NA	66345104	66337338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17235.known	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	25.219040425837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	-66341203	True	NA	-41	True	NA	NA	NA	66345089	66337368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17236.known	chr11	-	913	9	FSM	ENSG00000174744.14	ENST00000527375.5	913	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	157.992879586391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCAGGCTCCTGTGG	-66341193	True	NA	NA	False	NA	NA	NA	66345079	66337777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341212_66341334_66341532_66341624_66342095_66342242_66344971
transcript_1724.known	chr1	-	426	3	FSM	ENSG00000286061.1	ENST00000652351.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCCTAAGTCCCAAGT	-24502360	False	NA	-2	True	AATAAA	-21	NA	24502382	24496264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_24496597_24499652_24499712_24502347
transcript_17242.known	chr11	-	2007	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCCGTTACTCTC	-66345605	True	NA	-2	True	AATAAA	-17	NA	66347629	66345373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66346241_66346489
transcript_17244.known	chr11	-	2509	13	FSM	ENSG00000174669.12	ENST00000546034.1	2509	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	59.1227536571158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGCGTTCACCAAGTC	-66372142	False	NA	-36	True	NA	NA	NA	66372214	66362522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562_66371612_66372009
transcript_17246.known	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_9	39.0123947246098	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	-66367746	True	NA	-34	True	NA	NA	NA	66371760	66362520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_1725.nic	chr1	+	3806	18	NIC	ENSG00000133226.18	novel	3110	18	NA	NA	-18	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	391.491248847117	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGCCACTCTTAC	24615497	True	NA	4	True	AATAAA	-12	NA	24643253	24673262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_17254.known	chr11	+	286	2	FSM	ENSG00000255468.7	ENST00000581155.5	286	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTGTGCTGACT	66347923	False	NA	NA	False	NA	NA	NA	66347949	66353619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66348071_66353454
transcript_17255.known	chr11	-	2272	12	FSM	ENSG00000174669.12	ENST00000541567.5	2272	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	59.3639844066089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGCGTTCACCAAGTC	-66367633	True	NA	-36	True	NA	NA	NA	66371647	66362522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369132_66369368_66369533_66371243_66371326_66371562
transcript_17259.known	chr11	+	2974	18	FSM	ENSG00000254986.8	ENST00000531863.6	2660	18	-421	107	0	-107	multi-exon	FALSE	canonical	3	105	junction_1	68.8065338492357	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGGTGGCACGTGACAG	66479914	True	NA	-89	True	NA	NA	NA	66480012	66509550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66480466_66482192_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_17262.known	chr11	+	3078	18	FSM	ENSG00000254986.8	ENST00000532677.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	60.0295198431168	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	66479914	True	NA	18	True	AATAAA	-19	NA	66480012	66509657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_17268.known	chr11	+	2251	17	FSM	ENSG00000254986.8	ENST00000530165.5	2251	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_2	105.998157413231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGCTTGGACCTTGGT	66473526	True	NA	NA	False	GGGGCT	-15	NA	66480437	66509345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66480466_66482195_66482471_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_1727.known	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	427.34953035396	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	24615545	True	NA	23	True	AATAAA	-31	NA	24643301	24673281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_17275.known	chr11	-	922	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	790.278077641029	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66420327	True	NA	-10	True	AATAAA	-13	NA	66438834	66435837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
transcript_17284.known	chr11	-	812	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	725.091847630354	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66420319	True	NA	-10	True	AATAAA	-13	NA	66438826	66435837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
transcript_17285.known	chr11	-	1527	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_4	606.881938683299	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGACTTCTGCCAATAT	-66420341	True	NA	-15	True	AATAAA	-25	NA	66438848	66435074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
transcript_17286.nnic	chr11	-	880	5	NNC	ENSG00000174547.13	novel	922	6	NA	NA	-188	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_4	707.706992688358	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66439018	False	NA	-10	True	AATAAA	-13	NA	66439036	66435837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438781
transcript_17287.known	chr11	-	2209	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	728.260384409313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGAGACTTCTGCC	NA	False	NA	-20	True	AATAAA	-20	NA	66466738	66435079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
transcript_17295.known	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	-66479953	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66478097_66480038
transcript_17296.known	chr11	+	2882	21	FSM	ENSG00000248746.6	ENST00000513398.2	2882	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	21.6416265562457	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544779	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_173.known	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_-_2200_2400
transcript_17301.known	chr11	+	1214	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	52.6358301183224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	66589818	True	NA	-1	True	NA	NA	NA	66593200	66605998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_17303.known	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	27.0735958423837	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	66589802	True	NA	20	True	AATGAA	-21	NA	66593184	66606019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_17306.known	chr11	+	942	8	FSM	ENSG00000173992.9	ENST00000310190.8	942	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4635885845022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGGACTTTGCCTGCC	66589858	True	NA	-80	True	NA	NA	NA	66593240	66605919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593609_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_17312.nic	chr11	+	1489	7	NIC	ENSG00000173992.9	novel	1214	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	22	junction_4	54.2494239600754	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	66589769	True	NA	20	True	AATGAA	-21	NA	66593151	66606019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_17314.known	chr11	+	1196	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	15.0517625398342	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	66589770	True	NA	-87	True	NA	NA	NA	66593152	66605912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_17336.known	chr11	+	1607	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_3	60.1054628687498	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624621	True	NA	20	True	AATAAA	-16	NA	66638702	66646468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
transcript_17338.known	chr11	+	1763	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_1	184.083918061543	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	66624590	True	NA	4	True	NA	NA	NA	66638671	66646452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
transcript_17344.known	chr11	-	1806	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	52.1045956599693	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	-66675557	True	NA	-4	True	AATAAA	-18	NA	66677887	66664997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
transcript_17348.known	chr11	+	1426	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	230	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	66615290	True	NA	23	True	AATAAA	-27	NA	66616625	66627343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66617058_66624213_66624325_66626460
transcript_17349.known	chr11	+	5367	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	24.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTGGTGGCATGCA	66615294	True	NA	NA	False	AAGAAA	-13	NA	66616629	66629934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66617058_66624213_66625679_66626460
transcript_1735.nic	chr1	+	874	7	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-54	19086	-18	0	5prime_fragment	FALSE	canonical	0	0	junction_6	580.899422352001	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGAAGGAGAAGAC	24615497	True	NA	NA	False	NA	NA	NA	24643253	24652509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433
transcript_17355.known	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	197	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624616	True	NA	20	True	AATAAA	-16	NA	66638697	66646468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66646026
transcript_17357.known	chr11	+	654	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	290	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	66624636	True	NA	3	True	AATAAA	-18	NA	66638717	66649930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66649735
transcript_17358.known	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	265	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	66624585	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66665855
transcript_1736.known	chr1	+	768	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	716.702731650686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	24615518	True	NA	NA	False	AAAAAG	-5	NA	24643274	24652514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
transcript_17361.known	chr11	+	1011	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	62	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	66624638	True	NA	-9	True	NA	NA	NA	66638719	66646439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638894_66639699_66640124_66646026
transcript_17365.known	chr11	+	764	3	FSM	ENSG00000173933.21	ENST00000528039.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624634	True	NA	20	True	AATAAA	-16	NA	66638715	66646468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639838_66640124_66646026
transcript_17367.known	chr11	-	769	3	FSM	ENSG00000173914.12	ENST00000531969.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	96	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTTTCCCTAGGAGT	-66675494	True	NA	NA	False	NA	NA	NA	66677824	66665294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66665579_66676667_66677092_66677763
transcript_1737.known	chr1	+	673	6	FSM	ENSG00000133226.18	ENST00000490543.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	730.522169410347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	24615548	True	NA	85	True	AAAAAG	-44	NA	24643304	24650086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078_24647209_24648858_24649030_24649970
transcript_17371.known	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	66615334	True	NA	19	True	AATAAA	-15	NA	66616669	66646467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66617058_66646026
transcript_17372.known	chr11	+	372	2	FSM	ENSG00000239306.5	ENST00000409738.4	372	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGATTACCGCCGTTTA	66615379	False	NA	NA	False	NA	NA	NA	66616714	66626489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66617058_66626460
transcript_17373.known	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	66624616	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699
transcript_17374.known	chr11	+	757	2	FSM	ENSG00000173933.21	ENST00000532968.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTTTACCTTAGGCAAA	66624645	True	NA	NA	False	NA	NA	NA	66638726	66640289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638894_66639699
transcript_17375.known	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-66675547	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66677092_66677763
transcript_17379.known	chr11	+	1566	3	FSM	ENSG00000248643.5	ENST00000412278.2	1566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	237	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGTGCTTTGCGAGA	66615290	True	NA	21	True	AATAAA	-17	NA	66616625	66646469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66617058_66643449_66644141_66646026
transcript_1738.nic	chr1	+	1603	6	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-54	19178	-18	-92	5prime_fragment	FALSE	canonical	3	1308	junction_5	152.325441079289	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTTTCCACAGTGAC	24615497	True	NA	NA	False	NA	NA	NA	24643253	24652417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408
transcript_17380.known	chr11	+	2135	17	FSM	ENSG00000173715.18	ENST00000525908.6	2135	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	53.5465626814644	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCGCGTCTGCTTCCGC	66742808	True	NA	32	True	AATAAA	-24	NA	66744735	66843328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_17384.known	chr11	+	1462	8	FSM	ENSG00000173653.8	ENST00000309657.8	1462	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	56.6038867923396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGGGATCTTGTGTG	66838580	True	NA	36	True	ATTAAA	-45	NA	66843440	66846552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_17385.known	chr11	+	1428	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_2	128.153288315683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	66838590	True	NA	16	True	ATTAAA	-25	NA	66843450	66846532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_17386.known	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	133.477838360281	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66843705	False	NA	12	True	ATTAAA	-21	NA	66843722	66846528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_17388.known	chr11	-	1702	12	FSM	ENSG00000173599.15	ENST00000524491.6	1702	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	22.3621581181799	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCTGCAGCCCCTG	-66956385	True	NA	-12	True	AATAAA	-14	NA	66958376	66860429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66860670_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_17389.known	chr11	+	1187	2	FSM	ENSG00000173237.5	ENST00000308963.4	1187	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGATTTGCCTGGTGA	66975254	False	NA	NA	False	AATAAA	-15	NA	66975276	66977004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66975639_66976179
transcript_17390.known	chr11	+	1104	5	FSM	ENSG00000173156.7	ENST00000308831.7	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	12.9034879005639	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTCGTGCCTCTTT	67055423	True	NA	8	True	AAGAAA	-15	NA	67056846	67072017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67057035_67065895_67065984_67066737_67066848_67070424_67070560_67071434
transcript_17391.known	chr11	+	463	3	FSM	ENSG00000173120.15	ENST00000517637.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAGAAGAAG	67238157	False	NA	NA	False	NA	NA	NA	67240300	67243816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67240370_67243008_67243093_67243506
transcript_17393.known	chr11	+	2128	15	FSM	ENSG00000172932.16	ENST00000511455.7	2128	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.1553097009506	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	67288434	True	NA	7	True	AATAAA	-16	NA	67289302	67302484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_17395.known	chr11	+	2781	14	FSM	ENSG00000172830.13	ENST00000308127.9	2781	14	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_7	13.3292400028379	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300974	True	NA	9	True	AATAAA	-14	NA	67303529	67312592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_17399.known	chr11	+	2086	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_10	11.2338773359869	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	67390211	True	NA	NA	False	ATTAAA	-18	NA	67391985	67398410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_174.known	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_11100_13600
transcript_1740.nic	chr1	+	540	5	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-21	2482	-18	0	5prime_fragment	FALSE	canonical	3	1387	junction_1	125.776339189849	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAAGCAGCA	24615497	True	NA	31	True	GATAAA	-9	NA	24643253	24650032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970
transcript_17404.known	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	217.51430348881	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365157	True	NA	-12	True	AATAAA	-19	NA	67401858	67398182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_17405.known	chr11	-	1389	7	FSM	ENSG00000172531.16	ENST00000312989.11	1389	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	1164.46832169116	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365092	True	NA	-12	True	AATAAA	-19	NA	67401793	67398182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401233_67401727
transcript_17409.known	chr11	-	1054	6	FSM	ENSG00000172531.16	ENST00000358239.8	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	1208.34895622084	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATGGAGCCTTGGTG	-67365170	True	NA	-32	True	NA	NA	NA	67401871	67398430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401727
transcript_1741.nic	chr1	+	453	4	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-21	3510	-18	117	5prime_fragment	FALSE	canonical	3	1387	junction_1	144.573702849293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAGAAATAAAACAAA	24615497	True	NA	NA	False	AAGAAA	-38	NA	24643253	24649004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858
transcript_17411.known	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	3014	junction_4	124.927178788284	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-67365162	True	NA	-38	True	NA	NA	NA	67401863	67398208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_17417.known	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	107.251521615728	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	-67349128	True	NA	-5	True	AATAAA	-18	NA	67353518	67351547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
transcript_17418.known	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	92.6390846241477	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	-67349144	True	NA	NA	False	NA	NA	NA	67353534	67351808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
transcript_17419.known	chr11	-	1486	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	96.4100040913228	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTGGGCGCAGTGG	-67349189	True	NA	NA	False	AATAAA	-11	NA	67353579	67350776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
transcript_17426.known	chr11	-	1701	2	FSM	ENSG00000175482.9	ENST00000528087.1	1701	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGAGCCTGGAATCC	-67349100	True	NA	-22	True	AATAAA	-1	NA	67353490	67351564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67353078_67353302
transcript_17427.known	chr11	-	904	4	FSM	ENSG00000175482.9	ENST00000532830.5	904	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	111.493896195661	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	67356972	67351547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67356742
transcript_17428.known	chr11	+	1806	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	164.869591563218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	67422122	True	NA	-34	True	NA	NA	NA	67428503	67435344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_1743.known	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2230	junction_2	116.105813807923	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	24689218	True	NA	12	True	AATAAA	-19	NA	24745446	24844321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
transcript_17430.nic	chr11	+	1938	16	NIC	ENSG00000175634.15	novel	1806	16	NA	NA	-34	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	164.214845722168	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67428408	False	NA	23	True	ATTAAA	-14	NA	67428425	67435401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432355_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_17437.known	chr11	+	1733	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.976739611028	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422112	True	NA	23	True	ATTAAA	-14	NA	67428493	67435401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_17447.nic	chr11	+	1711	14	NIC	ENSG00000175634.15	novel	1733	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	151.03916181695	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422093	True	NA	23	True	ATTAAA	-14	NA	67428474	67435401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_67428624_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_17456.known	chr11	-	4411	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	26.2800304413827	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-67435435	True	NA	-2	True	AATAAA	-17	NA	67443476	67435509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_1746.known	chr1	+	2723	7	FSM	ENSG00000169504.15	ENST00000488683.1	2723	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	898.760751751482	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGATTCTTTTTTCCC	24689153	True	NA	13	True	AATAAA	-17	NA	24745381	24844267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772_24842588_24844128
transcript_17463.known	chr11	-	1931	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	144.944731558658	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTGCTGCTGCAA	NA	False	NA	-2	True	AATAAA	-19	NA	67443821	67438047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
transcript_17468.nic	chr11	-	887	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_5	197.189981715322	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464525	True	NA	-8	True	AATAAA	-22	NA	67469257	67464352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
transcript_1747.known	chr1	-	1757	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_6	59.2977421342687	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGATATTTTAAATTCAA	-25222161	True	NA	NA	False	ATTAAA	-15	NA	25232502	25222275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
transcript_17470.known	chr11	-	3551	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_5	68.9091592041451	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTGACTTGACTT	-67464519	True	NA	NA	False	AATAAA	-44	NA	67469251	67461709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17475.known	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	230.140114326517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464507	True	NA	-8	True	AATAAA	-22	NA	67469239	67464352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17476.nic	chr11	-	874	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	233.473767263048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	-67464525	True	NA	-13	True	AATAAA	-17	NA	67469257	67464357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_67464662_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17477.known	chr11	+	1186	6	FSM	ENSG00000110711.11	ENST00000683237.1	1186	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	92.9442843858621	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTCTGCTGAGCTGCT	67480740	True	NA	15	True	TATAAA	-19	NA	67483067	67491103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490450_67490787
transcript_17478.known	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	242.461213392988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-67464518	True	NA	-47	True	NA	NA	NA	67469250	67464391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17480.known	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	5.78791845139511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	67480854	False	NA	-91	True	NA	NA	NA	67483181	67490997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
transcript_17482.known	chr11	+	1030	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	95.1981486164516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	67480713	True	NA	13	True	TATAAA	-17	NA	67483040	67491101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
transcript_17484.known	chr11	+	1919	4	FSM	ENSG00000110711.11	ENST00000529797.2	1919	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	5.35412613473634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAAGGCCTTTATTTA	67480901	False	NA	-11	True	NA	NA	NA	67483228	67491077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483258_67487005_67487186_67489266_67490215_67490315
transcript_17486.known	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	356.133245975279	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	-67502264	True	NA	-57	True	NA	NA	NA	67508158	67506619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
transcript_17487.known	chr11	-	909	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	37.0255167268316	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGCCTTTCTGGGTC	-67502268	True	NA	-13	True	AATAAA	-25	NA	67508162	67506496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
transcript_17489.known	chr11	-	634	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTGGAGGGTTGCTG	-67502197	True	NA	NA	False	NA	NA	NA	67508091	67507052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507498_67507591_67507690_67508000
transcript_17492.known	chr11	+	741	7	FSM	ENSG00000084207.18	ENST00000398606.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	6807	junction_1	2259.32015339915	5450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	67390038	True	NA	43	True	AATAAA	-17	NA	67583811	67586653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_17496.known	chr11	+	1560	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	84.5683301782399	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTACCCTTTACCCA	67595041	True	NA	45	True	AATAAA	-41	NA	67606935	67612554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_175.known	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_2	5951.5	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_8586_10858_10992_11133
transcript_17501.known	chr11	+	1503	10	FSM	ENSG00000167792.13	ENST00000529927.5	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	324.633050202764	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	67595045	True	NA	19	True	AATAAA	-15	NA	67606939	67612528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67607050_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_17502.known	chr11	+	1512	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.148040119977	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	67595049	True	NA	26	True	AATAAA	-22	NA	67606943	67612535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_17518.known	chr11	-	287	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGAATGTCAACAAT	-67682323	False	NA	NA	False	NA	NA	NA	67683058	67682771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67682800_67683100
transcript_17520.known	chr11	-	1857	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.3781471969828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGATGATCTGTGGCTA	-67805229	True	NA	NA	False	AATAAA	-31	NA	67805334	67791766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
transcript_17525.known	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	-67805217	True	NA	NA	False	NA	NA	NA	67805322	67791647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67793294_67803001_67803065_67805217
transcript_17528.known	chr11	-	776	4	FSM	ENSG00000254610.3	ENST00000527543.2	776	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	-67955645	True	NA	NA	False	NA	NA	NA	67955802	67934562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67934709_67936774_67936992_67939682_67939775_67955481
transcript_17529.nnic	chr11	-	687	3	NIC	ENSG00000254610.3	novel	776	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	-67955648	True	NA	NA	False	NA	NA	NA	67955805	67934562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_67934709_67936774_67936992_67955481
transcript_1753.known	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	265.523633599723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-25222145	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
transcript_17536.nic	chr11	+	923	7	NIC	ENSG00000110717.13	novel	737	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1314.3322026371	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008126	True	NA	15	True	AATAAA	-16	NA	68030722	68036644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_68030962_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_17540.nnic	chr11	+	682	5	NIC	ENSG00000110717.13	novel	737	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1383.09080956386	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008030	True	NA	15	True	AATAAA	-16	NA	68030626	68036644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_68030734_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_17542.known	chr11	+	353	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	68008091	True	NA	10	True	AATAAA	-11	NA	68030687	68036639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68030734_68036252_68036382_68036461
transcript_17543.known	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1066.02857216243	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008084	True	NA	15	True	AATAAA	-16	NA	68030680	68036644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_17547.known	chr11	+	664	2	FSM	ENSG00000255031.5	ENST00000534517.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTCCCGATCTCGT	NA	False	NA	22	True	ATTAAA	-33	NA	68052822	68053762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68053086_68053361
transcript_17548.known	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	88.7380414478481	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	-68213583	False	NA	-4	True	AATAAA	-15	NA	68213595	68165718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_17549.known	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_9	28.4518219599291	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	-68213816	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_17554.known	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	114.281450813332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-68267108	True	NA	-151	True	NA	NA	NA	68271947	68261608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
transcript_17555.nic	chr11	-	1074	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	80.1888396224811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTGGGTGCATCCTGCT	-68267139	True	NA	-21	True	ATTAAA	-21	NA	68271978	68261334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_17558.nic	chr11	-	946	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	80.1888396224811	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTGTAAATGATTC	-68267139	True	NA	-5	True	ACTAAA	-21	NA	68271978	68261462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_17561.known	chr11	-	2071	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	6.94422221866655	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	-68267134	True	NA	-24	True	ATTAAA	-18	NA	68271973	68261337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
transcript_17563.known	chr11	-	687	3	FSM	ENSG00000171067.11	ENST00000532534.5	687	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGGCCGAATCCC	-68267077	True	NA	-78	True	GGGGCT	-2	NA	68271916	68267179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68267398_68268053_68268252_68271645
transcript_17564.known	chr11	-	610	3	FSM	ENSG00000171067.11	ENST00000529590.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	133.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGGGCTGCCT	-68267132	True	NA	1	True	AATAAA	-34	NA	68271971	68267100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68267398_68268053_68268252_68271856
transcript_17569.known	chr11	+	2771	23	FSM	ENSG00000110075.15	ENST00000524845.5	2771	23	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_14	121.695706749755	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGACGTCTGCTGCTGC	68446625	True	NA	NA	False	NA	NA	NA	68460748	68613117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_17571.nnic	chr11	+	736	6	NNC	ENSG00000069482.7	novel	749	6	NA	NA	-736	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	982.067736971335	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68683007	True	NA	14	True	AATAAA	-13	NA	68683042	68691175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_68683219_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_17573.nic	chr11	+	678	5	ISM	ENSG00000069482.7	ENST00000265643.4	749	6	262	0	262	0	3prime_fragment	FALSE	canonical	3	2351	junction_2	109.18562176404	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68684794	False	NA	14	True	AATAAA	-13	NA	68684805	68691175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_17574.nic	chr11	-	2300	7	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	-152	0	intron_retention	FALSE	canonical	3	66	junction_3	42.4761370915744	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-68750752	False	54	-18	True	AATAAA	-19	NA	68750763	68707439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189
transcript_17576.nic	chr11	-	891	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	697	6492	-152	-81	internal_fragment	FALSE	canonical	3	47	junction_1	71.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGTTGGTAAATGAATA	-68750752	False	54	-3	True	AATAAA	-18	NA	68750763	68744953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_68745112_68747207_68747367_68750189
transcript_17577.known	chr11	-	643	2	FSM	ENSG00000132749.11	ENST00000432435.2	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	-68750600	False	NA	-36	True	ACTAAA	-19	NA	68750611	68747145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68747367_68750189
transcript_17578.known	chr11	-	5238	19	FSM	ENSG00000110090.13	ENST00000265641.10	5238	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	3.74989711793027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTTTCTGTCTCTTTT	-68840781	True	NA	-1	True	AATAAA	-24	NA	68841916	68754882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639_68780746_68781770_68781960_68784814_68785011_68793314_68793403_68794803_68794912_68796855_68796934_68799217_68799356_68803999_68804102_68807466_68807639_68812436_68812577_68815333_68815488_68841774
transcript_17579.nic	chr11	-	847	4	ISM	ENSG00000110090.13	ENST00000265641.10	5238	19	46	52299	46	334	5prime_fragment	FALSE	canonical	3	13	junction_2	4.71404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTTTGTAGTGTTCTTG	-68840735	True	NA	-4	True	AATAAA	-15	NA	68841870	68807181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_68807639_68812436_68812577_68815333_68815488_68841774
transcript_17585.known	chr11	-	764	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	553.075165677224	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-68890206	True	NA	-12	True	AATAAA	-13	NA	68903827	68891282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_17589.known	chr11	-	662	7	FSM	ENSG00000197345.13	ENST00000450904.6	662	7	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_5	479.976185751844	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTCTGTGTTCTGGT	-68890165	True	NA	-5	True	AATAAA	-20	NA	68903786	68891275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_17590.known	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	FALSE	canonical	3	1442	junction_2	86.9725371725019	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-68890211	True	NA	-7	True	AATAAA	-18	NA	68903832	68891277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_17599.known	chr11	-	932	6	FSM	ENSG00000197345.13	ENST00000567045.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	520.54609786262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCGCGTGACCCCACCT	-68890157	True	NA	NA	False	NA	NA	NA	68903778	68892491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_176.known	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1119	junction_3	5326.59080046098	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
transcript_17603.known	chr11	-	2132	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	-69012969	True	NA	-22	True	AATAAA	-17	NA	69013246	69004397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69006262_69009853_69009958_69013082
transcript_17607.nic	chr11	-	1446	6	NIC	ENSG00000149716.13	novel	2484	5	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	25.4369809529354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-69673302	True	NA	0	True	AGTAAA	-21	NA	69675384	69665562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_69666410_69667478_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17608.known	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	614	junction_4	53.9785837161369	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	69626629	True	NA	15	True	AATAAA	-16	NA	69641155	69654474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
transcript_17611.known	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	14.6543508897528	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-69673271	True	NA	0	True	AGTAAA	-21	NA	69675353	69665562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17612.known	chr11	-	817	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.2565175405668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCGAACGTCGAGG	-69673240	True	NA	NA	False	NA	NA	NA	69675322	69667505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17613.nnic	chr11	-	998	4	NNC	ENSG00000149716.13	novel	775	3	NA	NA	-31	787	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	33.4896335536171	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTGCAACTGATACG	-69673302	True	NA	NA	False	NA	NA	NA	69675384	69670590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_69671217_69671748_69671820_69673215_69673322_69675189
transcript_17614.known	chr11	-	2274	3	FSM	ENSG00000149716.13	ENST00000536870.5	2274	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGGGACCATTTATA	-69673241	True	NA	-3	True	AGTAAA	-18	NA	69675323	69665565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69667588_69667894_69668013_69675189
transcript_17615.known	chr11	-	775	3	FSM	ENSG00000149716.13	ENST00000542341.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATCACTTGGGCTCAG	-69673334	True	NA	54	True	AATAAA	-15	NA	69675416	69671377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69671820_69673215_69673322_69675189
transcript_17617.known	chr11	-	1821	3	FSM	ENSG00000162344.4	ENST00000294312.4	1821	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-69703926	False	NA	-7	True	ATTAAA	-17	NA	69704022	69698237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69699577_69703260_69703365_69703644
transcript_17618.nic	chr11	-	1649	2	ISM	ENSG00000162344.4	ENST00000294312.4	1821	3	452	0	452	0	3prime_fragment	FALSE	canonical	3	224	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-69703474	False	NA	-7	True	ATTAAA	-17	NA	69703570	69698237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_69699577_69703260
transcript_1762.known	chr1	-	1962	2	FSM	ENSG00000117614.10	ENST00000476231.1	1962	2	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAGACTCT	-25222161	True	NA	NA	False	AATAGA	-25	NA	25232502	25230308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25232212_25232443
transcript_17623.known	chr11	+	2247	19	FSM	ENSG00000085733.16	ENST00000376561.7	2247	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_18	73.3214005443007	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATTTGCTTTGGTCTGT	70372063	True	NA	30	True	AATAAA	-19	NA	70398540	70436579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025_70435120_70435465_70435745_70436281
transcript_17624.known	chr11	+	3249	18	FSM	ENSG00000085733.16	ENST00000301843.13	3249	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	96.7934339618731	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	70372051	True	NA	26	True	AATAAA	-15	NA	70398528	70436575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70421469_70421581_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_17626.known	chr11	+	3272	17	FSM	ENSG00000085733.16	ENST00000346329.7	3272	17	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_10	31.1926974627075	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGGTCTGTGGTCA	70398389	False	NA	35	True	AATAAA	-24	NA	70398403	70436584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_17629.known	chr11	+	1087	4	FSM	ENSG00000085733.16	ENST00000482755.6	1087	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	4.98887651569859	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCACAGCCTGCACAA	70372059	True	NA	NA	False	NA	NA	NA	70398536	70408342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517
transcript_17631.nic	chr11	+	1383	2	ISM	ENSG00000085733.16	ENST00000482755.6	1087	4	-33	1806	-25	-1806	5prime_fragment	FALSE	canonical	3	366	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAATTTTATATTTTA	70398489	False	NA	NA	False	NA	NA	NA	70398503	70406536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_70398615_70405264
transcript_17632.known	chr11	-	392	2	FSM	ENSG00000246889.3	ENST00000524619.2	513	2	121	0	60	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGCTCGCGTCTGTAAT	-70397593	True	NA	NA	False	ATTAAA	-32	NA	70398302	70381090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_70381278_70398097
transcript_17635.known	chr11	-	2695	9	FSM	ENSG00000172893.18	ENST00000683287.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	304.345378435422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443956_71444216_71444854_71444959_71447609_71447735_71448289
transcript_17638.known	chr11	-	2627	9	FSM	ENSG00000172893.18	ENST00000355527.8	2627	9	0	0	0	0	multi-exon	TRUE	canonical	3	830	junction_3	56.4905965626139	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGGTTTCTGAC	-71433309	True	NA	NA	False	ATTAAA	-19	NA	71448393	71434410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_17639.known	chr11	-	2601	9	FSM	ENSG00000172893.18	ENST00000407721.6	2601	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	281.948327491049	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	-71433309	True	NA	NA	False	ATTAAA	-16	NA	71448393	71434413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448312
transcript_1764.nic	chr1	-	1521	7	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	45.9761411555554	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243917	True	NA	-24	True	AATAAA	-20	NA	25247457	25242248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25243634_25244176_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_17650.known	chr11	+	680	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	112	0	112	0	multi-exon	FALSE	canonical	3	150	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	71447048	True	NA	6	True	AATAAA	-19	NA	71448673	71452157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71448886_71451689
transcript_17651.known	chr11	+	2679	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	14.6876648926914	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTCTGGGGACCAGTC	71450881	True	NA	NA	False	NA	NA	NA	71453202	71501816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_17657.known	chr11	+	963	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGGCCTCTGCACGC	71451483	False	NA	NA	False	NA	NA	NA	71453108	71459056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109_71455171_71458427
transcript_17658.known	chr11	+	524	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	71450887	True	NA	NA	False	NA	NA	NA	71453208	71455460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109
transcript_17660.known	chr11	+	952	5	FSM	ENSG00000158483.18	ENST00000426628.7	956	5	4	0	-2	0	multi-exon	TRUE	canonical	3	11	junction_2	29.8872882677569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCTGCAGCTGCCACAT	71785883	True	NA	NA	False	NA	NA	NA	71787517	71800103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71787633_71789782_71789846_71791738_71791820_71796016_71796167_71799560
transcript_17662.known	chr11	+	2010	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	29	5	-1	1	multi-exon	FALSE	canonical	3	61	junction_2	11.4406682011537	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	71785875	True	NA	NA	False	AATAAA	-18	NA	71787509	71801234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
transcript_17666.nic	chr11	-	1222	6	NIC	ENSG00000254469.9	novel	1167	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	6.88767014308903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTTTTTGTTCCTTA	-71928561	False	NA	NA	False	AATAAA	-43	NA	71928596	71865508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_71865855_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928364
transcript_17669.known	chr11	-	541	2	FSM	ENSG00000254469.9	ENST00000531488.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTGTATTGTGTTTCA	-71928412	False	415	98	True	NA	NA	NA	71928447	71927577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71928036_71928364
transcript_17675.known	chr11	+	2282	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	19.3067345763078	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922999	True	NA	24	True	AATAAA	-29	NA	71929045	71997597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17677.known	chr11	+	2375	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	102.650423160355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	71923004	True	NA	22	True	AATAAA	-27	NA	71929050	71997595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17678.nic	chr11	+	1098	8	NIC	ENSG00000137522.18	novel	2282	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	74.9032028415232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTGATGAATATATT	71922984	True	NA	0	True	AAGAAA	-1	NA	71929030	71996522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
transcript_17680.nic	chr11	+	2117	8	NIC	ENSG00000137522.18	novel	2282	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	79.3715108505179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71923009	True	NA	24	True	AATAAA	-29	NA	71929055	71997597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_71929125_71957226_71957265_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17682.known	chr11	+	2202	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	58.5752611986476	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	71923035	True	NA	18	True	AATAAA	-23	NA	71929081	71997591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17685.known	chr11	+	812	7	FSM	ENSG00000137522.18	ENST00000525243.5	812	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	79.3923100110388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCCACTCAGGACCCC	71923029	True	NA	NA	False	NA	NA	NA	71929075	71996420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17689.known	chr11	+	786	7	FSM	ENSG00000137522.18	ENST00000530655.5	786	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	97.1552308879398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTCCAAGGCATCAACT	71922980	True	NA	NA	False	NA	NA	NA	71929026	71996275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17690.known	chr11	+	721	6	FSM	ENSG00000137522.18	ENST00000528683.5	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	7.21110255092798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCACTAGGGTGAGA	71923000	True	NA	NA	False	NA	NA	NA	71929046	71990796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596
transcript_17691.known	chr11	+	571	6	FSM	ENSG00000137522.18	ENST00000530058.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	81.7435012707432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACGGGACTTTGCAGA	71922971	True	NA	NA	False	NA	NA	NA	71929017	71990663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982806_71982916_71987003_71987112_71990596
transcript_17693.nic	chr11	+	934	6	NIC	ENSG00000137522.18	novel	2202	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	99.3245186245571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTGATGAATATATT	71922971	True	NA	0	True	AAGAAA	-1	NA	71929017	71996522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_71929125_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17694.nic	chr11	+	2009	6	NIC	ENSG00000137522.18	novel	2282	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	99.3245186245571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922971	True	NA	24	True	AATAAA	-29	NA	71929017	71997597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_71929125_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17698.nic	chr11	+	1634	4	ISM	ENSG00000137522.18	ENST00000525243.5	812	7	-33	4452	-3	1172	5prime_fragment	FALSE	canonical	3	22	junction_3	85.6387762640266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCCGGGCGTGGTGGCA	71922996	True	NA	NA	False	NA	NA	NA	71929042	71991968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_71929125_71957226_71957265_71960749_71960892_71990596
transcript_17703.known	chr11	+	2642	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-513	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.25357021462548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTGCTGACTCCAT	72080247	True	NA	7	True	GATAAA	-21	NA	72080336	72096895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_17705.known	chr11	+	814	6	FSM	ENSG00000184154.16	ENST00000538478.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.0896650077659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTAGAGATGTTCTCTA	72080600	True	NA	24	True	AATAAA	-38	NA	72080844	72095618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72080886_72088339_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_17712.known	chr11	-	867	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	270.146330717261	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-72105556	True	NA	-7	True	AATAAA	-18	NA	72112769	72109589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_17713.known	chr11	-	734	6	FSM	ENSG00000110200.9	ENST00000535503.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	407.243219710286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTTGATTGCCAGGT	-72105567	True	NA	-67	True	NA	NA	NA	72112780	72109649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112733
transcript_17714.known	chr11	-	849	6	FSM	ENSG00000110200.9	ENST00000538919.5	849	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	387.396128013691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCAGCTGATGGCCCC	-72105019	False	NA	NA	False	NA	NA	NA	72112232	72109801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72111923
transcript_17717.known	chr11	-	886	6	FSM	ENSG00000110200.9	ENST00000227618.9	801	6	-85	0	0	0	multi-exon	FALSE	canonical	3	497	junction_4	197.737199332852	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	-72105567	True	NA	-4	True	AATAAA	-21	NA	72112780	72109586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_17719.known	chr11	-	848	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	345.532863849446	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-72105561	True	NA	-6	True	AATAAA	-19	NA	72112774	72109588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
transcript_17724.known	chr11	-	883	6	FSM	ENSG00000110200.9	ENST00000543587.5	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	385.543564334823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105553	True	NA	0	True	AATAAA	-25	NA	72112766	72109582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_17725.known	chr11	-	872	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	360.887794196479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	-72105541	True	NA	-4	True	AATAAA	-21	NA	72112754	72109586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_17728.known	chr11	-	1089	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	86.1945473913518	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTTCTGGCCCCTC	-72092070	True	NA	-5	True	GATAAA	-18	NA	72103297	72097291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
transcript_1773.nic	chr1	-	1471	6	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_2	41.5095169810491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243915	True	NA	-24	True	AATAAA	-20	NA	25247455	25242248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_17730.known	chr11	-	704	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	382.162514514441	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-72105473	True	NA	-7	True	AATAAA	-18	NA	72112686	72109589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
transcript_17737.known	chr11	-	1346	4	FSM	ENSG00000149357.10	ENST00000538404.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_3	17.3781471969828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTTTTTTTGTTTTG	-72092009	True	NA	-15	True	AATGAA	-38	NA	72103236	72097347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72098416_72098780_72098859_72099110_72099257_72103182
transcript_1774.nic	chr1	-	2061	6	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	38.2695701569798	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_17742.known	chr11	-	500	2	FSM	ENSG00000110200.9	ENST00000543015.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	-72103032	False	NA	-4	True	AATAAA	-21	NA	72110245	72109586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087
transcript_17743.known	chr11	-	812	6	FSM	ENSG00000110200.9	ENST00000542531.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	413.638779613324	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-72105066	False	NA	-6	True	AATAAA	-19	NA	72112279	72109588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112215
transcript_17744.known	chr11	+	930	4	FSM	ENSG00000110195.14	ENST00000393676.5	930	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.96655480858378	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCTTGAGAATTATT	72192090	True	NA	2	True	AATAAA	-13	NA	72192139	72196299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72192342_72195270_72195460_72195611_72195748_72195896
transcript_17745.known	chr11	-	9963	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	16.4376262141331	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-72432274	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_17746.known	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	27.9800402619658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-72432277	True	NA	-9	True	AATAAA	-23	NA	72434534	72293302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
transcript_17748.known	chr11	-	612	3	FSM	ENSG00000162129.14	ENST00000542555.2	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	65	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	-72432073	False	NA	-5	True	ATTAAA	-38	NA	72434330	72428805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72429107_72430311_72430364_72434071
transcript_17749.nic	chr11	-	2586	13	ISM	ENSG00000186642.16	ENST00000376450.7	3355	21	58064	-1	106	0	3prime_fragment	FALSE	canonical	3	13	junction_6	4.78060316975449	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCCCATGGGGCTGT	-72584276	True	NA	-10	True	AATAAA	-18	NA	72584367	72576140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876_72581948_72582443_72582567_72583437_72583516_72584200
transcript_17750.nnic	chr11	+	1512	6	NNC	ENSG00000256633.1	novel	664	2	NA	NA	-49	227	intron_retention	FALSE	canonical	1	1	junction_3	1.2	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTAGGATATGAAAT	72584192	True	NA	14	True	AATAAA	-28	NA	72584522	72588206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_72585057_72585134_72585257_72585360_72585558_72585697_72585785_72586505_72586672_72587800
transcript_17752.known	chr11	+	664	2	FSM	ENSG00000256633.1	ENST00000545254.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACTCCAGAGACCAGC	72584241	True	NA	NA	False	NA	NA	NA	72584571	72587979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72585057_72587800
transcript_17754.known	chr11	-	2330	7	FSM	ENSG00000214530.10	ENST00000334805.11	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	46.2228899524419	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTCATCACTGTGCCT	-72793892	True	NA	-17	True	AATAAA	-17	NA	72794047	72754728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72792874
transcript_17756.known	chr11	+	1400	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	19.3506144861535	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	72822228	True	NA	-22	True	NA	NA	NA	72822438	72829598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_17760.known	chr11	-	7192	8	FSM	ENSG00000054965.11	ENST00000356467.5	7192	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.31354671564091	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCCTGCTGCTCATG	-73596082	True	NA	-1	True	AATAAA	-19	NA	73598112	73400486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73430689_73430771_73468404_73468493_73597922
transcript_17765.known	chr11	+	2061	8	FSM	ENSG00000021300.14	ENST00000398494.8	2061	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	32.7800337438035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	73647062	True	NA	19	True	AATAAA	-24	NA	73647608	73662819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73655802_73655908_73660752_73660853_73661465
transcript_17768.known	chr11	+	2275	7	FSM	ENSG00000021300.14	ENST00000398492.8	2275	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	25.2877880057197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	NA	False	NA	19	True	AATAAA	-24	NA	73646177	73662819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_17769.known	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	6.42910050732864	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	73647523	False	NA	19	True	AATAAA	-24	NA	73647548	73662819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_1777.nic	chr1	-	2172	6	NIC	ENSG00000117616.18	novel	2013	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	38.9840993226726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243914	True	NA	-30	True	AATAAA	-14	NA	25247454	25242254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242427_25242538_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_17772.known	chr11	-	3326	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	155.462181240064	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753628	True	NA	NA	False	AATAAA	-17	NA	73761074	73675637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
transcript_17773.known	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	113.069962087774	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753691	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_17778.known	chr11	-	758	5	FSM	ENSG00000175582.20	ENST00000541588.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	256.161570107618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCATCTTCAACCTTC	-73753628	True	NA	NA	False	NA	NA	NA	73761074	73677893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73677963_73679653_73679721_73720845_73720900_73730764_73730824_73760565
transcript_17781.known	chr11	-	1812	2	FSM	ENSG00000175582.20	ENST00000541795.1	1812	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAGTTCTGAAATCAG	-73753571	True	NA	NA	False	GATAAA	-44	NA	73761017	73729463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73730824_73760565
transcript_17784.known	chr11	+	1004	9	FSM	ENSG00000175581.14	ENST00000540162.5	1004	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	173.563208947058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTGTACTTGCCA	73784523	True	NA	-72	True	NA	NA	NA	73787876	73864515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73817822_73817948_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17786.known	chr11	+	1560	9	FSM	ENSG00000175581.14	ENST00000508278.6	1560	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	178.722375487794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	73784518	True	NA	NA	False	NA	NA	NA	73787871	73865133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73823012_73823071_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17792.known	chr11	+	1500	8	FSM	ENSG00000175581.14	ENST00000310614.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	29.2498037670027	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	73784520	True	NA	NA	False	NA	NA	NA	73787873	73865133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17794.known	chr11	+	1058	8	FSM	ENSG00000175581.14	ENST00000398483.7	1058	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	184.623721031039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTGTGTGTGAGAG	73784552	True	NA	18	True	AATAAA	-20	NA	73787905	73864605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73789334_73789491_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17798.known	chr11	+	742	7	FSM	ENSG00000175581.14	ENST00000544819.5	742	7	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_2	130.561607424745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGGGTAGTTAGAGT	73784531	True	NA	NA	False	NA	NA	NA	73787884	73864424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17799.known	chr11	+	531	6	FSM	ENSG00000175581.14	ENST00000497094.6	531	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	193.951540339333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACCTCTGCAACTCTC	73784537	True	NA	NA	False	NA	NA	NA	73787890	73844934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73843246_73843368_73844806
transcript_1780.nic	chr1	-	2126	6	NIC	ENSG00000117616.18	novel	2013	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_1	31.0199935525461	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTTGTATATTTAAT	-25243917	True	NA	-66	True	AATGAA	-30	NA	25247457	25242290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242414_25242538_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_17801.known	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	153.462699050942	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	73784555	True	NA	15	True	AATAAA	-17	NA	73787908	73864602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
transcript_17803.nic	chr11	+	882	6	NIC	ENSG00000175581.14	novel	1058	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	149.410307542686	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTGTGTGTGAGAG	73784519	True	NA	18	True	AATAAA	-20	NA	73787872	73864605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_73787993_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_1781.known	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	33.3691474269272	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
transcript_17814.known	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	273.309488289172	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	73871659	True	NA	34	True	AATAAA	-35	NA	73877027	73927745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_1782.known	chr1	-	2013	5	FSM	ENSG00000117616.18	ENST00000568254.5	2013	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	45.8005185560164	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243917	True	NA	-30	True	AATAAA	-14	NA	25247457	25242254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25244225_25245149_25245302_25246443_25247030_25247308
transcript_17823.known	chr11	+	4954	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_8	164.383144457752	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATAAGGAGGGATATGG	73871630	True	NA	NA	False	ATTAAA	-18	NA	73876998	73931114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_1783.nic	chr1	-	2354	5	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-61	0	intron_retention	FALSE	canonical	3	65	junction_2	19.421315609402	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-24	True	AATAAA	-20	NA	25247518	25242248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_17830.nnic	chr11	+	1373	11	NIC	ENSG00000175575.13	novel	4954	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	40	junction_6	238.482053832149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGCCTGAATATGAAGAA	73871627	True	NA	14	True	AATAAA	-15	NA	73876995	73927725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_17835.known	chr11	-	582	3	FSM	ENSG00000181924.7	ENST00000537289.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	4.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGAGTTGAGAGCCAT	-73862029	True	NA	NA	False	AAAACA	-16	NA	73876843	73872996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73873395_73876478_73876576_73876756
transcript_17837.known	chr11	-	818	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTTTTGTTTTT	-73862032	True	NA	-1	True	AATAAA	-22	NA	73876846	73872666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73873395_73876756
transcript_17838.known	chr11	-	922	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTCTTTTGTTT	-73876598	False	NA	-3	True	AATAAA	-20	NA	73876674	73872668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73873395_73876478
transcript_17841.known	chr11	+	2020	2	FSM	ENSG00000175575.13	ENST00000381783.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	73871605	True	NA	NA	False	NA	NA	NA	73876973	73880703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73877069_73878778
transcript_17842.known	chr11	-	1644	8	FSM	ENSG00000175567.11	ENST00000663595.2	1644	8	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	27.0856540083717	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTCCTCCCTCTCTTGT	-73980556	True	NA	-32	True	CATAAA	-16	NA	73982843	73974671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73975122_73975490_73975672_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_17843.known	chr11	-	1413	7	FSM	ENSG00000175567.11	ENST00000536983.5	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	121.494512907648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCACTTGTCATCCATA	-73980543	True	NA	-69	True	NA	NA	NA	73982830	73974708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73975122_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_17848.known	chr11	+	2487	14	FSM	ENSG00000214517.10	ENST00000328257.13	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_13	27.9378007376954	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	74166191	True	NA	20	True	AATAAA	-17	NA	74171288	74254703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246075_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_17851.nnic	chr11	+	715	4	NNC	ENSG00000214517.10	novel	590	4	NA	NA	8	-177	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	190.78143399072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCTACTTTTTTCT	74166177	True	NA	NA	False	ATTAAA	-16	NA	74171274	74205746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_74171523_74203727_74203822_74204352_74204446_74205466
transcript_17854.known	chr11	-	8477	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_7	12.934976206683	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTCTGTGTAATTT	-74396499	True	NA	-5	True	AATAAA	-17	NA	74398433	74330315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
transcript_17858.known	chr11	-	663	1	FSM	ENSG00000165434.8	ENST00000622957.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATCATTGTAAGTTAT	-74396474	True	NA	NA	False	NA	NA	NA	74398408	74397745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_74397700_74398400
transcript_17859.known	chr11	+	3788	12	FSM	ENSG00000077514.9	ENST00000263681.7	3788	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_8	29.8068160156655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGTATGTAGCATGA	74588883	True	NA	NA	False	AATAAA	-35	NA	74592581	74643076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_1786.known	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	6.37704215656966	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
transcript_17861.nic	chr11	+	1867	12	NIC	ENSG00000077514.9	novel	3788	12	NA	NA	-1	224	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	78.5273548169391	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGGGTTACTTTCTGT	74588856	True	NA	NA	False	AATAAA	-20	NA	74592554	74669341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74668776
transcript_17863.nic	chr11	+	1002	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-27	17504	-1	6802	5prime_fragment	FALSE	canonical	3	232	junction_6	23.3998081275929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGAAAATTTTGTTGCT	74588856	True	NA	NA	False	AAAAAG	-37	NA	74592554	74625572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_17864.known	chr11	+	2493	2	FSM	ENSG00000254837.2	ENST00000526036.1	2493	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCCTCAAGCTATCTC	74493031	True	NA	NA	False	TATAAA	-42	NA	74493365	74498533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74493974_74496648
transcript_17866.known	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	-74746099	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_74745700_74746100
transcript_17869.nic	chr11	-	238	2	ISM	ENSG00000166435.16	ENST00000524430.1	561	5	-2	13289	-2	-11793	5prime_fragment	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGGGGCCATTCC	-74948186	True	NA	NA	False	AAGAAA	-24	NA	74949133	74945053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_74945086_74948927
transcript_17871.known	chr11	+	839	6	FSM	ENSG00000118363.13	ENST00000532972.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1164.78712218156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGGGGGGTGGGGG	74920190	True	NA	NA	False	NA	NA	NA	74949264	74977087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74963594_74963688_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_17875.known	chr11	+	2691	5	FSM	ENSG00000118363.13	ENST00000263672.11	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1131.24378451331	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTTTAAT	74920191	True	NA	NA	False	ATTAAA	-21	NA	74949265	74979033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_17884.known	chr11	+	612	4	FSM	ENSG00000118363.13	ENST00000530257.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	1170.27356725777	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCCTGAAATTTTA	74920186	True	NA	NA	False	GATAAA	-43	NA	74949260	74977156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033_74965118_74969610_74969700_74976856
transcript_17887.known	chr11	+	772	4	FSM	ENSG00000118363.13	ENST00000526361.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	1155.79131142069	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATAGCTTTGGGCCAT	74920189	True	NA	NA	False	NA	NA	NA	74949263	74977348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033_74965118_74969639_74969700_74976856
transcript_1789.known	chr1	+	2266	7	FSM	ENSG00000183726.11	ENST00000374358.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_5	63.935948851609	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	25325911	True	NA	23	True	ATTAAA	-17	NA	25338333	25362361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_17892.known	chr11	+	265	2	FSM	ENSG00000118363.13	ENST00000527290.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	2827	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAAATCTTTTCCTT	74920196	True	NA	NA	False	NA	NA	NA	74949270	74965169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033
transcript_17894.known	chr11	+	746	2	FSM	ENSG00000162139.10	ENST00000534628.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCCAGAGACCTCCACA	74987358	True	NA	NA	False	AATAAA	-31	NA	74988943	74995043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74989155_74994508
transcript_17895.known	chr11	-	7352	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	51.4321127528534	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	-75347841	True	NA	-1	True	AATAAA	-35	NA	75351661	75260121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_17901.known	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	25.2881354773018	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	-75347885	True	NA	2	True	NA	NA	NA	75351705	75265598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_17909.known	chr11	+	903	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	8348.73916229271	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	75275786	True	NA	-90	True	NA	NA	NA	75399519	75405884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_17915.known	chr11	+	2059	7	FSM	ENSG00000149273.15	ENST00000531188.6	2059	7	0	0	0	0	multi-exon	FALSE	canonical	3	11487	junction_6	3654.23227991264	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGGATGTGCCTAGGT	75275784	True	NA	12	True	ATTAAA	-23	NA	75399517	75406907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_17916.known	chr11	+	771	7	FSM	ENSG00000149273.15	ENST00000526248.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7983.56724779093	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275823	True	NA	44	True	AATAAA	-20	NA	75399556	75405692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404053_75404208_75404671_75404869_75405613
transcript_17917.known	chr11	+	473	5	FSM	ENSG00000149273.15	ENST00000528439.5	473	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8216.37695398647	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275784	True	NA	44	True	AATAAA	-20	NA	75399517	75405692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404759_75404869_75405613
transcript_17918.known	chr11	+	796	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	7753.57908037027	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275785	True	NA	44	True	AATAAA	-20	NA	75399518	75405692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_17919.known	chr11	+	1306	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	7818.27426965539	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	75275797	True	NA	NA	False	NA	NA	NA	75399530	75422280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
transcript_17920.known	chr11	+	737	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_3	7902.9198047304	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275796	True	NA	44	True	AATAAA	-20	NA	75399529	75405692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
transcript_17921.known	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	19144	junction_1	1326.1771525705	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	75275809	True	NA	NA	False	AATAAA	-24	NA	75399542	75404994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
transcript_17922.known	chr11	+	564	6	FSM	ENSG00000149273.15	ENST00000534440.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8408.96243302347	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGACACAAGGTCTGAC	75275797	True	NA	32	True	AATAAA	-8	NA	75399530	75405680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402380_75404671_75404869_75405613
transcript_17923.known	chr11	-	3222	18	FSM	ENSG00000158555.15	ENST00000529721.5	3222	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	5.68735621895144	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	-75490698	True	NA	-4	True	ATTAAA	-14	NA	75490751	75434639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75490603
transcript_17925.known	chr11	+	2299	6	FSM	ENSG00000149257.16	ENST00000533603.5	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	943.74458409042	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	75562034	False	NA	26	True	AATAAA	-16	NA	75562055	75572783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75562320_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_17926.known	chr11	+	2058	5	FSM	ENSG00000149257.16	ENST00000358171.8	2058	5	0	0	0	0	multi-exon	FALSE	canonical	3	1821	junction_4	136.844802604995	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	75515548	True	NA	26	True	AATAAA	-16	NA	75562252	75572783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75562320_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_17928.known	chr11	+	651	2	FSM	ENSG00000255326.1	ENST00000527803.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAACACATGGCTGGTG	75583166	True	NA	NA	False	NA	NA	NA	75583195	75594665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75583282_75594100
transcript_17929.known	chr11	+	3152	9	FSM	ENSG00000198382.9	ENST00000531818.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	26.9835019039412	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCTGATTTTTTTTTA	75979000	True	NA	2	True	AATAAA	-17	NA	75979525	76142651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75980039_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_17930.known	chr11	-	683	2	FSM	ENSG00000255507.7	ENST00000531263.2	713	2	30	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGGCATATAGTAGTT	-75814764	True	NA	NA	False	ATTAAA	-31	NA	75814797	75813513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75813862_75814462
transcript_17935.nnic	chr11	+	1164	3	NNC	ENSG00000179240.13	novel	5444	2	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGATTTTATGGTAATT	76380724	True	NA	NA	False	AATAAA	-45	NA	76381322	76395102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_76382294_76394597_76394662_76394973
transcript_17936.nic	chr11	+	506	2	ISM	ENSG00000179240.13	ENST00000531207.5	4228	4	10	10506	0	13	5prime_fragment	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTATTTATTTACTT	76380724	True	NA	14	True	TATAAA	-20	NA	76381322	76404113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_76381375_76403659
transcript_17937.known	chr11	+	5444	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTTACTGGGAG	76380724	True	NA	NA	False	ATTAAA	-21	NA	76381322	76408132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76382294_76403659
transcript_17940.known	chr11	-	664	2	FSM	ENSG00000255135.5	ENST00000658868.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCCGTCTCAAAA	-76442157	True	NA	NA	False	NA	NA	NA	76444673	76435558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76435827_76444277
transcript_17941.known	chr11	-	599	2	FSM	ENSG00000255135.5	ENST00000530759.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTTCCCCTTTGCTG	-76442058	True	NA	NA	False	AATAAA	-21	NA	76444574	76441337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76441640_76444277
transcript_17942.known	chr11	-	738	2	FSM	ENSG00000255135.5	ENST00000572035.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTTAAAAAAGAAAT	-76442140	True	NA	NA	False	AATAAA	-5	NA	76444656	76441353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76441640_76444204
transcript_17943.known	chr11	+	934	4	FSM	ENSG00000158636.16	ENST00000533988.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTCTGATCATTATAA	76442856	True	NA	20	True	AATAAA	-23	NA	76445021	76453931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313
transcript_17945.known	chr11	-	573	2	FSM	ENSG00000204529.4	ENST00000526984.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTCCATTCATTTATT	NA	False	NA	NA	False	NA	NA	NA	76704479	76703273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76703528_76704160
transcript_17949.known	chr11	+	2585	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTACTCAGCCAGT	76780302	True	NA	28	True	AATAAA	-15	NA	76783355	76798144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76783405_76795608
transcript_17951.known	chr11	-	336	2	FSM	ENSG00000255100.1	ENST00000528075.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGGG	-76782882	True	NA	NA	False	NA	NA	NA	76783062	76782580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76782857_76783002
transcript_17952.known	chr11	-	296	2	FSM	ENSG00000255100.1	ENST00000526585.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTATTCCCCCTGCTG	-76782879	True	NA	NA	False	NA	NA	NA	76783059	76782629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76782857_76782990
transcript_17953.known	chr11	+	7333	11	FSM	ENSG00000078124.13	ENST00000532485.6	7333	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	7.87464284904401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTAGTGTTTCATCC	76859485	True	NA	NA	False	ATTAAA	-26	NA	76860917	77026797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_17959.nic	chr11	+	1068	2	ISM	ENSG00000078124.13	ENST00000525194.5	846	11	13	147645	0	-111619	5prime_fragment	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGGGTTCTGTAAGCT	76859504	True	NA	10	True	AATAAA	-14	NA	76860936	76869044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_76861080_76868119
transcript_17960.known	chr11	+	2564	4	FSM	ENSG00000149260.18	ENST00000527129.1	2564	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGGCCTCGCC	77119396	False	NA	-23	True	AATAAA	-43	NA	77119406	77124495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77120910_77121933_77122050_77122575_77122713_77123687
transcript_17964.nic	chr11	-	3261	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	124	junction_1	290.035553376172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTGGAGTATGCCTTT	-77412062	False	NA	-12	True	AATAAA	-15	NA	77412072	77322019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_17965.known	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	280.211221918197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-77474046	False	NA	10	True	NA	NA	NA	77474060	77322947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_17967.nic	chr11	-	2333	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_1	290.035553376172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-77412062	False	NA	10	True	NA	NA	NA	77412072	77322947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_17973.nic	chr11	-	3114	15	NIC	ENSG00000149269.10	novel	3459	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77406990	True	NA	-9	True	AATAAA	-18	NA	77411971	77322016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_17974.known	chr11	-	3459	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_14	136.808838030536	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77474080	False	NA	-9	True	AATAAA	-18	NA	77474094	77322016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_17975.nic	chr11	-	2272	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	51	47	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTGTAATCAATTGAG	-77407032	True	NA	-24	True	TATAAA	-21	NA	77412013	77322900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_17977.nic	chr11	-	2181	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	-49	-24	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACCTCCTTCATAACC	-77407012	True	NA	-14	True	AATAAA	-27	NA	77411993	77322971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_17992.known	chr11	-	3001	15	FSM	ENSG00000149269.10	ENST00000530617.5	3001	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	266.624056969925	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77412054	False	NA	-9	True	AATAAA	-18	NA	77412064	77322016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77323155_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_17998.known	chr11	-	2982	7	FSM	ENSG00000074201.9	ENST00000525428.6	2982	7	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_5	36.1789533661032	2871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGAAAATACAAAAATTAG	-77617925	True	NA	NA	False	NA	NA	NA	77637794	77614529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_18.known	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00046_+_0_500
transcript_180.known	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9209.96583551524	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_1800.known	chr1	+	1102	6	FSM	ENSG00000183726.11	ENST00000480937.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	438.863805752992	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGCTCCCTGTGT	25325900	True	NA	NA	False	NA	NA	NA	25338322	25361279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25356792_25356854_25360659
transcript_18001.known	chr11	-	953	7	FSM	ENSG00000074201.9	ENST00000528364.1	953	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	362.238142969818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATGATTTATATTTTC	-77617907	True	NA	NA	False	NA	NA	NA	77637776	77618532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77618688_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_18006.known	chr11	-	1172	6	FSM	ENSG00000074201.9	ENST00000263309.7	1172	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	402.280001988665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	-77617882	True	NA	4	True	NA	NA	NA	77637751	77616194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77629762_77629900_77637589
transcript_18007.known	chr11	-	1121	6	FSM	ENSG00000074201.9	ENST00000525064.5	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	392.652008781313	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	-77617903	True	NA	4	True	NA	NA	NA	77637772	77616194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_18010.known	chr11	-	898	5	FSM	ENSG00000074201.9	ENST00000532069.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	436.835495352656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTAGCAGATCTATGT	-77617925	True	NA	NA	False	NA	NA	NA	77637794	77616403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77629762_77629900_77637589
transcript_18011.known	chr11	+	1835	3	FSM	ENSG00000178301.4	ENST00000313578.4	1835	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGAAGGCTTCTTTTA	77589827	True	NA	NA	False	TTTAAA	-19	NA	77589952	77610356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77590612_77603555_77603673_77609297
transcript_18012.known	chr11	-	11242	16	FSM	ENSG00000048649.14	ENST00000308488.11	11242	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_10	14.0658767550725	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAGCATGATGTGTTT	-77817905	True	NA	-12	True	AATAAA	-15	NA	77820722	77660008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18015.nic	chr11	-	3161	11	ISM	ENSG00000048649.14	ENST00000308488.11	11242	16	-147	23760	0	0	5prime_fragment	FALSE	canonical	3	115	junction_5	13.8162947276033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGCAAACTTGCTTGA	-77820150	False	719	31	True	AAAAAG	-12	NA	77820869	77683768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18016.known	chr11	-	2107	6	FSM	ENSG00000048649.14	ENST00000528095.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	8.78635305459552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAAATATAAGTTG	-77819992	False	NA	NA	False	NA	NA	NA	77820711	77701118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18021.nic	chr11	-	1006	5	ISM	ENSG00000048649.14	ENST00000528095.5	2107	6	-304	24454	-146	0	5prime_fragment	FALSE	canonical	3	136	junction_1	8.07774721070176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	-77820296	True	NA	-38	True	NA	NA	NA	77821015	77725572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18022.known	chr11	-	520	2	FSM	ENSG00000048649.14	ENST00000530604.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGAGGTGAAAGTCACC	-77819980	False	NA	NA	False	NA	NA	NA	77820699	77813353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77813702_77820527
transcript_18028.known	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	16.7179445333895	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	-77991812	True	NA	-2	True	AATAAA	-17	NA	77994668	77878719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_1803.known	chr1	+	776	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	434.043315810761	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAATTACA	25325894	True	NA	-22	True	NA	NA	NA	25338316	25360967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_18031.known	chr11	-	1845	12	FSM	ENSG00000149262.17	ENST00000529807.5	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	9.52855647145737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTATATAGTGTTTT	-77991810	True	NA	NA	False	AATAAA	-17	NA	77994666	77924441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_18035.known	chr11	-	956	3	FSM	ENSG00000149262.17	ENST00000527522.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	86	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTGGTGAAGACTCT	-77991814	True	NA	-6	True	AATAAA	-44	NA	77994670	77987015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77987699_77991107_77991300_77994589
transcript_18041.known	chr11	+	579	5	FSM	ENSG00000087884.15	ENST00000526415.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	110.384555079051	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819148	True	NA	15	True	AATAAA	-15	NA	77821128	77872352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821242_77841018_77841061_77842478_77842629_77869721_77869818_77872174
transcript_18044.known	chr11	+	531	4	FSM	ENSG00000087884.15	ENST00000393427.7	522	4	0	-9	0	7	multi-exon	FALSE	canonical	3	243	junction_1	41.0717529317765	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACTCACCATTCTCCA	77819163	True	NA	24	True	AATAAA	-24	NA	77821143	77872361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77872174
transcript_18047.known	chr11	+	421	4	FSM	ENSG00000087884.15	ENST00000525409.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	45.3210767744986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819206	True	NA	15	True	AATAAA	-15	NA	77821186	77872352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821238_77841018_77841061_77842478_77842629_77872174
transcript_18049.nic	chr11	+	471	3	NIC	ENSG00000087884.15	novel	522	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	110	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819118	True	NA	15	True	AATAAA	-15	NA	77821098	77872352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_77821242_77842478_77842629_77872174
transcript_18051.known	chr11	+	726	5	FSM	ENSG00000087884.15	ENST00000526164.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.674754371515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTTATCTGAAAGTC	77819133	True	NA	NA	False	AATAAA	-34	NA	77821113	77900785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77884779_77884917_77900570
transcript_18052.known	chr11	+	606	5	FSM	ENSG00000087884.15	ENST00000533193.5	606	5	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	132.599726621136	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACTGTCACTCACCA	NA	False	NA	17	True	AATAAA	-17	NA	77841018	77872354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77841061_77842478_77842629_77855344_77855483_77869721_77869818_77872174
transcript_18053.known	chr11	+	277	2	FSM	ENSG00000254675.1	ENST00000526730.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGAATCCCGTTATT	78022922	False	NA	NA	False	AATAAA	-13	NA	78022932	78023721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_78023022_78023533
transcript_18054.known	chr11	-	1673	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGTTTTGGTTCTGCT	-78020998	True	NA	-5	True	AATAAA	-15	NA	78023276	78015714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78017271_78023159
transcript_18055.known	chr11	-	422	2	FSM	ENSG00000151366.13	ENST00000534029.5	422	2	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGACTCTTTATTG	-78041706	True	NA	-18	True	ATTAAA	-13	NA	78079819	78069855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78070037_78079578
transcript_18056.known	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3593	junction_1	228.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-78041749	True	NA	0	True	AATAAA	-19	NA	78079862	78068296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78070037_78072997_78073142_78079578
transcript_18059.known	chr11	-	1667	14	FSM	ENSG00000159063.14	ENST00000532440.6	1667	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	343.598964667692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-78133924	True	NA	-30	True	AAGAAA	-7	NA	78139626	78100963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78107716_78107765_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18063.known	chr11	-	1727	14	FSM	ENSG00000159063.14	ENST00000679986.1	1727	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	366.608395943589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133900	True	NA	-12	True	AATAAA	-14	NA	78139602	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78127357_78127437_78135229_78135348_78139493
transcript_18064.known	chr11	-	2026	14	FSM	ENSG00000159063.14	ENST00000679444.1	2026	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	337.4468882163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133909	True	NA	-12	True	AATAAA	-14	NA	78139611	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78137241_78137646_78139493
transcript_18066.known	chr11	-	1507	14	FSM	ENSG00000159063.14	ENST00000681957.1	1507	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	366.925512006111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAAGTCTGCTGTGAAT	-78133946	True	NA	NA	False	NA	NA	NA	78139648	78101138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18067.known	chr11	-	1677	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	334.172137904223	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	-78133890	True	NA	-13	True	AATAAA	-13	NA	78139592	78100946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18070.known	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	302.642895542291	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133958	True	NA	-12	True	AATAAA	-14	NA	78139660	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18074.known	chr11	-	2053	13	FSM	ENSG00000159063.14	ENST00000530910.6	2053	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	294.236535611893	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133556	False	NA	-12	True	AATAAA	-14	NA	78139258	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
transcript_18075.known	chr11	-	1636	13	FSM	ENSG00000159063.14	ENST00000680256.1	1636	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	299.144741536416	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133920	True	NA	-12	True	AATAAA	-14	NA	78139622	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127440_78139493
transcript_18076.known	chr11	-	1605	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	298.22782119268	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133917	True	NA	-2	True	AATAAA	-24	NA	78139619	78100935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
transcript_18084.known	chr11	-	1471	12	FSM	ENSG00000159063.14	ENST00000529139.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	313.814784559722	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133922	True	NA	-2	True	AATAAA	-24	NA	78139624	78100935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18085.known	chr11	-	1566	12	FSM	ENSG00000159063.14	ENST00000525783.6	1566	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	305.054635399157	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133922	True	NA	-2	True	AATAAA	-24	NA	78139624	78100935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78139493
transcript_18094.known	chr11	-	1355	11	FSM	ENSG00000159063.14	ENST00000679697.1	1355	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	325.739159451239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133922	True	NA	-12	True	AATAAA	-14	NA	78139624	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_1810.known	chr1	+	965	5	FSM	ENSG00000183726.11	ENST00000491936.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	479.654302597193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCATGGTCCAGCCAC	25325897	True	NA	NA	False	NA	NA	NA	25338319	25361265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_18104.known	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	291.220934434771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-78133924	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18111.known	chr11	-	2539	14	FSM	ENSG00000159063.14	ENST00000679497.1	2539	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	337.864420831649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133924	True	NA	-12	True	AATAAA	-14	NA	78139626	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78135229_78135348_78138709
transcript_18112.known	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	299.512509013489	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133942	True	NA	-12	True	AATAAA	-14	NA	78139644	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
transcript_18113.known	chr11	-	1398	12	FSM	ENSG00000159063.14	ENST00000530608.6	1398	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	306.768790637331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133886	True	NA	-12	True	AATAAA	-14	NA	78139588	78100945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124093_78139493
transcript_18125.known	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_13	64.1241399587066	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-78569008	True	NA	-17	True	AATAAA	-21	NA	78574864	78435967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
transcript_18126.nic	chr11	-	2097	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_13	157.228962807627	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	NA	False	NA	-17	True	AATAAA	-21	NA	78574930	78435967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_18130.nic	chr11	-	1790	14	NIC	ENSG00000137513.10	novel	2137	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_13	157.228962807627	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	-78569022	True	NA	27	True	GATAAA	-15	NA	78574878	78436222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_18141.nic	chr11	-	1655	13	NIC	ENSG00000137513.10	novel	2137	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_7	216.926959033578	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	-78569020	True	NA	27	True	GATAAA	-15	NA	78574876	78436222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_1815.known	chr1	+	1953	7	FSM	ENSG00000117640.18	ENST00000374303.7	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	33.0840680019183	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25815604	True	NA	11	True	ATTAAA	-21	NA	25819953	25832938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_18168.known	chr11	-	3489	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_7	20.1459518266077	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGACTTGAGTGCT	-82894667	True	NA	-7	True	AATAAA	-30	NA	82900430	82822935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_18169.known	chr11	-	3333	9	FSM	ENSG00000137509.12	ENST00000680566.1	3333	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	93.1061222476804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	NA	False	NA	-115	True	AATATA	-37	NA	82901740	82823043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901592
transcript_1817.known	chr1	+	1868	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	103.113206396336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25815653	True	NA	11	True	ATTAAA	-21	NA	25820002	25832938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
transcript_18172.known	chr11	-	1420	8	FSM	ENSG00000137509.12	ENST00000531283.2	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	20.2534955410826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTTCCTATGCCT	-82894667	True	NA	NA	False	AATATA	-27	NA	82900430	82838268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_18176.known	chr11	-	2120	10	FSM	ENSG00000137509.12	ENST00000393399.6	2120	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	116.658094923203	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGTGTGTTGCTTCTG	-82894667	True	NA	-7	True	AATAAA	-18	NA	82900430	82824367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82884822_82884886_82900234
transcript_18177.known	chr11	+	3524	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	22.630952255705	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTTTTTAATTGTT	82898449	True	NA	18	True	AATAAA	-18	NA	82901735	82934659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
transcript_18178.known	chr11	-	9859	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.76662979332984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	-83071261	True	NA	NA	False	AATAAA	-19	NA	83071897	82973132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
transcript_1818.known	chr1	+	1873	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_5	94.2645508956339	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	25815579	True	NA	15	True	ATTAAA	-25	NA	25819928	25832942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
transcript_18186.nic	chr11	+	463	3	FSM	ENSG00000246067.9	ENST00000689041.1	463	3	-7	7	-4	0	multi-exon	FALSE	canonical	3	14	junction_2	49	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTTCTGTGTCAT	83069856	True	NA	12	True	NA	NA	NA	83072061	83073600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072147_83072622_83072703_83073302
transcript_18187.known	chr11	+	2467	3	FSM	ENSG00000246067.9	ENST00000656330.1	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	10	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCCGGGCAATAACAGCA	83069846	True	NA	NA	False	NA	NA	NA	83072051	83075492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072147_83072622_83072805_83073302
transcript_1819.known	chr1	+	2099	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	107.287257190943	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25820112	True	NA	11	True	ATTAAA	-21	NA	25820192	25832938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_18191.known	chr11	+	563	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	6	3	0	0	multi-exon	FALSE	canonical	3	30	junction_1	51	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	83069897	True	NA	16	True	NA	NA	NA	83072102	83073604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072182_83072622_83072805_83073302
transcript_18196.known	chr11	+	597	2	FSM	ENSG00000246067.9	ENST00000534499.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAACCAAAGTTAATT	83069916	True	NA	NA	False	GATAAA	-19	NA	83072121	83073194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072147_83072622
transcript_18198.known	chr11	+	1487	1	FSM	ENSG00000246067.9	ENST00000663168.1	1487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTTCAAAAAATGATC	83069897	True	NA	1	True	NA	NA	NA	83072102	83073589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072100_83073600
transcript_18200.known	chr11	+	1887	12	FSM	ENSG00000137494.14	ENST00000531895.5	1887	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	15.6928156431508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAGTCTATACAAACTA	83193757	False	NA	NA	False	ATTAAA	-14	NA	83194397	83255995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83224854_83225056_83227746_83227873_83236403_83236510_83240758_83240935_83245497_83245625_83247942_83248088_83255848
transcript_18205.known	chr11	+	7677	16	FSM	ENSG00000165494.12	ENST00000298281.8	7677	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	34.0446765295251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCTGGTGCAATGGGT	NA	False	NA	NA	False	NA	NA	NA	83156987	83187451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
transcript_18208.known	chr11	-	1986	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	245.374076666628	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTGTGTGGGTTTT	-83280072	True	NA	-31	True	TATAAA	-16	NA	83285998	83261461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
transcript_18209.known	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_8	199.014721503209	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83285680	True	NA	-25	True	TATAAA	-22	NA	83286351	83261455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
transcript_18210.known	chr11	-	4014	9	FSM	ENSG00000137500.10	ENST00000529689.6	3990	9	-40	16	-17	-16	multi-exon	FALSE	canonical	3	507	junction_8	131.409426982998	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGTTGACCTTAATCCA	NA	False	NA	NA	False	AATAAA	-14	NA	83286407	83259096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_18211.known	chr11	-	1550	9	FSM	ENSG00000137500.10	ENST00000455220.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	285.660610471587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTGGATCACTTGAGG	NA	False	NA	30	True	NA	NA	NA	83286390	83261316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83286099
transcript_18214.known	chr11	-	773	9	FSM	ENSG00000137500.10	ENST00000529312.5	773	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	370.810261454561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGGCTTCTTAGAA	-83280053	True	NA	NA	False	NA	NA	NA	83285979	83261890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285126_83285212_83285872
transcript_18224.nic	chr11	-	1827	8	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	199	junction_6	292.388056374066	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83285692	True	NA	-25	True	TATAAA	-22	NA	83286363	83261455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_18225.known	chr11	-	1053	8	FSM	ENSG00000137500.10	ENST00000529745.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	253.751123451821	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	-83285539	False	NA	-21	True	ACTAAA	-27	NA	83286210	83261756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285872
transcript_18237.known	chr11	-	719	8	FSM	ENSG00000137500.10	ENST00000529073.5	719	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	282.795159153788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTCTGGAAGTAGTA	-83280052	True	NA	NA	False	NA	NA	NA	83285978	83261928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273739_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_18238.known	chr11	-	1039	7	FSM	ENSG00000137500.10	ENST00000529856.5	1039	7	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_6	320.394938578416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACGGACTAAAAGAGGAA	-83285684	True	NA	-60	True	NA	NA	NA	83286355	83261795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83285872
transcript_1825.known	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	35	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-25856410	True	NA	-11	True	AATAAA	-14	NA	25859457	25834005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25835847_25837412_25837555_25859279
transcript_18251.known	chr11	-	435	4	FSM	ENSG00000247137.9	ENST00000529031.5	435	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGTAAAGGTTTTA	-83193168	True	NA	-33	True	AATATA	-20	NA	83193600	83191062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83191169_83192427_83192542_83192735_83192817_83193466
transcript_18254.known	chr11	-	549	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	NA	False	NA	1	True	NA	NA	NA	83193794	83191028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83191169_83192735_83192817_83193466
transcript_18255.known	chr11	+	1720	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	83153938	True	NA	12	True	AATAAA	-15	NA	83157159	83158879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83157200_83158900
transcript_18256.known	chr11	-	452	4	FSM	ENSG00000247137.9	ENST00000529607.1	452	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACTAATATACTTATAAAA	-83193137	True	NA	NA	False	AATAAA	-6	NA	83193569	83192019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83192198_83192427_83192542_83192735_83192793_83193466
transcript_18257.known	chr11	+	2514	12	FSM	ENSG00000137494.14	ENST00000260047.10	2514	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.80841842326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGACTCAGTTGTGCACC	83193235	False	NA	NA	False	ATTAAA	-25	NA	83193875	83256099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210417_83211294_83211431_83224854_83225056_83227746_83227873_83236403_83236510_83240758_83240935_83245497_83245625_83247942_83248088_83255844
transcript_18262.known	chr11	-	566	5	FSM	ENSG00000150672.18	ENST00000530800.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.72854512504805	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAATTTGGGGGCAGTT	-83724897	False	NA	NA	False	NA	NA	NA	83724956	83486154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83724855
transcript_18278.known	chr11	+	1149	6	FSM	ENSG00000171204.13	ENST00000529197.1	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	187.764746424881	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	85623497	True	NA	20	True	AATAAA	-34	NA	85628604	85636510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_18281.known	chr11	+	675	6	FSM	ENSG00000171204.13	ENST00000530783.5	675	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	312.498703997313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCCTCTAGTCTTTCAG	85623489	True	NA	NA	False	AATGAA	-9	NA	85628596	85636128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85629131_85629204_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_18285.known	chr11	+	820	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	306.683158976818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATACATGAAGAGTAAC	85623485	True	NA	NA	False	ATTAAA	-43	NA	85628592	85636210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_18297.known	chr11	+	1388	4	FSM	ENSG00000171204.13	ENST00000528361.5	1388	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	157.599351380504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCCAGGTCTGGTTTG	85623489	True	NA	NA	False	AATAAA	-13	NA	85628596	85635087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085
transcript_18300.known	chr11	+	376	4	FSM	ENSG00000171204.13	ENST00000531274.1	376	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	299.351892520417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAATGGTCTATACC	85623522	True	NA	NA	False	AATGAA	-40	NA	85628629	85636159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85634085_85634177_85635666_85635779_85636045
transcript_18302.known	chr11	+	853	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	303.494096592778	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	85623496	True	NA	17	True	AATAAA	-31	NA	85628603	85636507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
transcript_18305.known	chr11	+	1015	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	149.935611180266	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	85623485	True	NA	46	True	AATAAA	-43	NA	85628592	85636536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_18306.known	chr11	+	1273	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	160.800773906374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	85623494	True	NA	46	True	AATAAA	-43	NA	85628601	85636536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
transcript_18307.known	chr11	+	722	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	214.915099516065	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	85644681	True	NA	17	True	AATAAA	-18	NA	85647986	85656547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
transcript_18308.known	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	25.6953303150592	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	85644661	True	NA	12	True	AATAAA	-13	NA	85647966	85656542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
transcript_18312.known	chr11	+	656	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	233.337142826045	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	85644671	True	NA	12	True	AATAAA	-13	NA	85647976	85656542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
transcript_18314.known	chr11	-	898	5	FSM	ENSG00000137504.15	ENST00000527529.6	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	106.54928437113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	-85656453	False	7736	NA	False	AATAGA	-44	NA	85664189	85660334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85660598_85661636_85661750_85662388_85662458_85663523_85663602_85663814
transcript_18315.known	chr11	-	4368	5	FSM	ENSG00000137504.15	ENST00000682836.1	4368	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	76.4215283804243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTGTTGAAAGAACAAAT	-85657328	True	NA	79	True	AATATA	-8	NA	85665064	85657741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85660598_85662388_85662458_85663178_85663294_85663523_85663602_85663814
transcript_18317.known	chr11	-	1431	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	64.3963422011599	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATTTATTTCCTGG	-85656917	False	NA	NA	False	NA	NA	NA	85664653	85660152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
transcript_18322.nic	chr11	-	2785	3	ISM	ENSG00000137504.15	ENST00000260058.9	1431	4	-476	913	0	-731	5prime_fragment	FALSE	canonical	3	222	junction_2	18	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	-85657393	True	NA	0	True	ATTAAA	-22	NA	85665129	85661065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_18323.known	chr11	-	745	3	FSM	ENSG00000137504.15	ENST00000528889.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGGAAAGATTATTTG	-85656123	False	NA	NA	False	TATAAA	-7	NA	85663859	85661952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85662458_85663523_85663602_85663697
transcript_18324.nic	chr11	-	2100	3	ISM	ENSG00000137504.15	ENST00000525639.1	2850	4	-27	1416	0	202	5prime_fragment	FALSE	canonical	3	222	junction_2	18	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	-85657393	True	NA	0	True	AATAAA	-22	NA	85665129	85661750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_18327.known	chr11	-	2850	4	FSM	ENSG00000137504.15	ENST00000525639.1	2850	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	95.4195414414096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	-85657366	True	NA	NA	False	AATAGA	-44	NA	85665102	85660334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85661750_85662388_85662458_85663523_85663602_85663814
transcript_18328.nic	chr11	-	3517	20	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	21.6541692773335	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064927	True	NA	-14	True	AATAAA	-18	NA	86069117	85957683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18329.known	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_7	19.9979223297553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064869	True	NA	-14	True	AATAAA	-18	NA	86069059	85957683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18331.known	chr11	+	1696	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	143.911696497849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTTTGTAGTTCT	86243110	True	NA	83	True	AATAAA	-23	NA	86245222	86278813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
transcript_18334.known	chr11	+	1791	12	FSM	ENSG00000074266.22	ENST00000673233.2	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_2	31.5982005973716	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTGTTTTTTGTAGT	86242518	False	NA	80	True	AATAAA	-20	NA	86245049	86278810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979_86277139_86277917_86277992_86278398
transcript_18340.known	chr11	+	1484	10	FSM	ENSG00000074266.22	ENST00000525244.5	1484	10	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_2	34.2960963117119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATCTATTGTTAGGA	86243155	False	NA	NA	False	GATAAA	-22	NA	86245267	86277535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979
transcript_18341.known	chr11	+	1745	10	FSM	ENSG00000074266.22	ENST00000528180.5	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	128.211438021364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTTTAATAAAAATT	86242221	True	NA	-23	True	NA	NA	NA	86244752	86278707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86276979_86277139_86277917_86277992_86278398
transcript_18364.known	chr11	+	1409	5	FSM	ENSG00000149196.17	ENST00000528004.5	1409	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	505.559281884924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGCAAATTTCTCTCA	86293080	True	NA	NA	False	NA	NA	NA	86302250	86345229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86306244_86306483_86326512_86326677_86337378_86337531_86344602
transcript_18368.known	chr11	+	1108	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	133.507256357098	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	86293069	True	NA	29	True	AATAAA	-30	NA	86302239	86345943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
transcript_18377.known	chr11	+	499	5	NNC	ENSG00000149196.17	novel	1108	5	NA	NA	2977	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	396.574709228917	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATTTGTCATGTT	86306285	True	NA	18	True	AATAAA	-15	NA	86306332	86345662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_86306415_86306415_86306483_86337378_86337531_86344602_86344722_86345583
transcript_18378.known	chr11	+	1694	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_2	43.7137151119519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-6	True	AAAACA	-4	NA	86302210	86345638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
transcript_18383.known	chr11	+	715	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	382.826621621619	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	86293072	True	NA	NA	False	ATTAAA	-19	NA	86302242	86345791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
transcript_18386.known	chr11	+	8980	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	13.6995828925034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	87033917	True	NA	9	True	AATAAA	-19	NA	87037933	87328824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_18391.known	chr11	+	3938	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	32.7645355971881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	NA	False	NA	35	True	AGTAAA	-20	NA	87037843	87323758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_18396.nnic	chr11	-	1992	7	Fusion	ENSG00000123892.12_ENSG00000109861.17	novel	1432	3	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_2	750.600574355111	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	-88311920	True	NA	-12	True	AATAAA	-25	NA	88337736	88113250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_-_88114141_88149674_88149956_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18397.known	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	10	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	-88174616	True	NA	-12	True	AATAAA	-25	NA	88175443	88113250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88114141_88149674_88149956_88175182
transcript_18398.known	chr11	-	928	2	FSM	ENSG00000123892.12	ENST00000531138.1	928	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATATTGTCCTTGTCCT	-88174606	True	NA	NA	False	NA	NA	NA	88175433	88113463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88114141_88175182
transcript_18399.known	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_5	761.464083867656	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311922	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
transcript_18401.known	chr11	-	1870	7	FSM	ENSG00000109861.17	ENST00000227266.10	1870	7	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_3	223.707956943869	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311920	True	NA	-6	True	AATAAA	-19	NA	88337736	88293591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18402.known	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	607.606163563208	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311924	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
transcript_18403.known	chr11	-	2774	7	FSM	ENSG00000109861.17	ENST00000679224.1	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	614.39771773303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTTTTTTTCACTA	-88311933	True	NA	NA	False	TATAAA	-18	NA	88337749	88292493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337707
transcript_18404.known	chr11	-	1867	7	FSM	ENSG00000109861.17	ENST00000678506.1	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	664.580485887317	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311956	True	NA	-6	True	AATAAA	-19	NA	88337772	88293591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312426_88312555_88334936_88335083_88337500
transcript_18405.known	chr11	-	1802	7	FSM	ENSG00000109861.17	ENST00000678395.1	1802	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	664.580485887317	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311914	True	NA	-6	True	AATAAA	-19	NA	88337730	88293591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312449_88312555_88334936_88335083_88337500
transcript_18407.known	chr11	-	1667	7	FSM	ENSG00000109861.17	ENST00000678464.1	1667	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	616.128233406001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGCTTAATCATTTGT	-88311920	True	NA	61	True	NA	NA	NA	88337736	88293761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294476_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18410.known	chr11	-	1662	6	FSM	ENSG00000109861.17	ENST00000677208.1	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	724.846632053981	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311879	True	NA	-6	True	AATAAA	-19	NA	88337695	88293591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88334936_88335083_88337500
transcript_18413.known	chr11	-	1431	6	FSM	ENSG00000109861.17	ENST00000678915.1	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	650.876823984385	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTAGACTTTCAGCAG	-88311964	True	NA	-120	True	NA	NA	NA	88337780	88293942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18414.known	chr11	-	900	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	832.809514534987	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311909	True	NA	-23	True	AATAAA	-16	NA	88337725	88326087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
transcript_18415.known	chr11	-	778	4	FSM	ENSG00000109861.17	ENST00000529974.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	908.920360769975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	-88311917	True	NA	-21	True	AATAAA	-18	NA	88337733	88326085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326400_88328111_88328197_88334936_88335083_88337500
transcript_18416.known	chr11	-	6144	4	FSM	ENSG00000109861.17	ENST00000524463.6	6144	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	899.21904388691	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTATTGTTTTATT	-88311964	True	NA	NA	False	AATAAA	-33	NA	88337780	88320810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337500
transcript_18417.known	chr11	-	764	4	FSM	ENSG00000109861.17	ENST00000677796.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	27.4752413799932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311907	True	NA	-23	True	AATAAA	-16	NA	88337723	88326087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337546
transcript_18418.known	chr11	-	669	4	FSM	ENSG00000109861.17	ENST00000528020.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	33.8755893757667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGTGTATGTTTTGTT	-88311907	True	NA	43	True	NA	NA	NA	88337723	88326021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337707
transcript_18420.known	chr11	-	1604	3	FSM	ENSG00000109861.17	ENST00000679199.1	1604	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCAGACTGCTTCCTC	-88311920	True	NA	NA	False	TATAAA	-24	NA	88337736	88315252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88316475_88334936_88335083_88337500
transcript_18422.known	chr11	-	724	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	909	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311906	True	NA	-23	True	AATAAA	-16	NA	88337722	88326087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88334936_88335083_88337500
transcript_18426.known	chr11	+	3466	19	FSM	ENSG00000077616.11	ENST00000534061.6	3466	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	4.82182538049648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACGAGTTAAGAATTA	90134078	True	NA	NA	False	AATAAA	-22	NA	90134662	90192894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_18427.known	chr11	+	3035	18	FSM	ENSG00000077616.11	ENST00000321955.8	3035	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	5.49047618333084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGCAAGGAAACCAGAAT	90134127	True	NA	7	True	AATAAA	-19	NA	90134711	90192611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_18431.known	chr11	-	1136	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	169.932655596317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGAGATGGAAGGAAG	-90213944	True	NA	NA	False	AAAAAG	-32	NA	90223030	90202406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_18432.known	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_6	52.0523774673165	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-90213963	True	NA	2	True	AATAAA	-30	NA	90223049	90200428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_1844.known	chr1	-	1712	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	1571.22730691648	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTGAAATGACTAA	-25906142	False	NA	-45	True	AATAAA	-21	NA	25906153	25900117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
transcript_18442.known	chr11	-	566	6	FSM	ENSG00000110172.12	ENST00000533772.5	566	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	230.861343667579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGACCTCATGTAAGAAT	-90213963	True	NA	NA	False	NA	NA	NA	90223049	90210570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_90210592_90211214_90211336_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_18446.known	chr11	-	6037	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	20.0489401216124	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTTAGATAACATT	-93195281	True	NA	-4	True	AATAAA	-15	NA	93197991	93144173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
transcript_1846.known	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_4	395.159777811457	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	-25847893	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_18460.known	chr11	-	374	3	FSM	ENSG00000166002.7	ENST00000526869.1	374	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	22	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACGTGGCCACGCG	-93538421	True	NA	NA	False	NA	NA	NA	93543355	93479048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93479270_93499275_93499349_93543275
transcript_18461.nic	chr11	-	988	3	NIC	ENSG00000166002.7	novel	987	3	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	198.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATGCTTATCATGTTTT	-93538443	True	NA	-10	True	AATAAA	-19	NA	93543377	93478471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93479285_93499275_93499349_93543275
transcript_18464.nic	chr11	-	1636	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.020904544594	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACTTCATGCTTGAAA	-93734016	True	NA	-33	True	AATAAA	-16	NA	93741508	93730199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18466.nic	chr11	-	1676	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	166.849788945045	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACTTCATGCTTGAAA	-93734034	True	NA	-33	True	AATAAA	-16	NA	93741526	93730199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18474.nic	chr11	-	1646	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.020904544594	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGAAAGTCAGCATGT	NA	False	NA	-20	True	ATTAAA	-15	NA	93741599	93730280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18478.nic	chr11	-	1595	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	166.849788945045	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGAAAGTCAGCATGT	-93734034	True	NA	-20	True	ATTAAA	-15	NA	93741526	93730280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18493.nic	chr11	-	1885	13	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_2	155.665952889156	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGAAAGTCAGCATGT	-93734034	True	NA	-20	True	ATTAAA	-15	NA	93741526	93730280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18508.known	chr11	+	5087	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	15.5881921830978	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTAAGTTCACTTT	93781838	True	NA	NA	False	AATAAA	-17	NA	93784281	93814963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18522.known	chr11	+	2317	11	FSM	ENSG00000042429.12	ENST00000639724.1	2317	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_10	46.862031539403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAGTATGTGGTTT	93781863	True	NA	-21	True	TTTAAA	-24	NA	93784306	93812378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93811852
transcript_18523.known	chr11	+	3235	11	FSM	ENSG00000042429.12	ENST00000639189.1	3235	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	44.7089476503306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGGAGCTTGTGGG	93781849	True	NA	22	True	AATAAA	-35	NA	93784292	93813307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18536.known	chr11	+	2108	10	FSM	ENSG00000042429.12	ENST00000639596.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	61.9762997313898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATATTACTAACT	93781819	True	NA	-89	True	NA	NA	NA	93784262	93812310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93811852
transcript_18542.known	chr11	+	4163	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	23.2647802482637	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739399	True	NA	NA	False	NA	NA	NA	93741671	93764749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_18548.known	chr11	-	1728	9	FSM	ENSG00000166012.17	ENST00000546088.5	1728	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	235.834124704208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93728683	False	NA	-11	True	ATTAAA	-24	NA	93736175	93730271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93734962
transcript_18555.known	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	69.2999985275495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739318	True	NA	NA	False	NA	NA	NA	93741590	93764749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
transcript_18559.known	chr11	+	2417	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	62.6542178979848	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739321	True	NA	24	True	AATAAA	-34	NA	93741593	93763102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
transcript_18563.known	chr11	+	2442	8	FSM	ENSG00000182919.15	ENST00000540113.5	2442	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	69.3929950002307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739321	True	NA	24	True	AATAAA	-34	NA	93741593	93763102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_18569.known	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	28.6034962897895	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-93734003	True	NA	NA	False	NA	NA	NA	93741495	93735566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18571.nic	chr11	+	525	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-61	61515	-61	-26777	5prime_fragment	FALSE	canonical	3	21	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAAGAAAAGCAGA	93659748	True	NA	NA	False	NA	NA	NA	93661620	93668843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_18575.nic	chr11	-	515	3	ISM	ENSG00000166012.17	ENST00000448108.7	1632	6	-27	2714	-27	-172	5prime_fragment	FALSE	canonical	3	255	junction_2	29	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGTACCAGCCAACAG	-93734030	True	NA	NA	False	TATAAA	-12	NA	93741522	93738280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_93738500_93739236_93739332_93741321
transcript_18578.known	chr11	+	2278	2	FSM	ENSG00000042429.12	ENST00000530819.1	2278	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	93781838	True	NA	NA	False	NA	NA	NA	93784281	93789796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000
transcript_18580.known	chr11	-	538	2	FSM	ENSG00000166012.17	ENST00000529508.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTGTGTTTGTTTTAC	-93734002	True	NA	NA	False	NA	NA	NA	93741494	93738966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93739332_93741321
transcript_18581.known	chr11	+	1862	10	FSM	ENSG00000182919.15	ENST00000528099.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.2699017845576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAAATCAGTGT	93739386	True	NA	NA	False	ATTAAA	-16	NA	93741658	93762303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93741962_93742095_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_18582.known	chr11	-	334	3	FSM	ENSG00000166012.17	ENST00000532235.1	334	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	126.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGTGAAGATTTAGAAAA	-93733984	True	NA	NA	False	AATGAA	-2	NA	93741476	93737155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93737240_93739236_93739332_93741321
transcript_18586.known	chr11	+	2852	5	FSM	ENSG00000110218.9	ENST00000227638.8	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	14.5838095160352	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTAAGCTTATTTCAT	94126114	True	NA	10	True	AATAAA	-23	NA	94128840	94181968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94129494_94153490_94153631_94178368_94178593_94179601_94180258_94180789
transcript_18587.known	chr11	+	570	2	FSM	ENSG00000250519.7	ENST00000515097.2	570	2	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATATCGCTAGAGAGA	94238082	True	NA	NA	False	NA	NA	NA	94238149	94279206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94238278_94278764
transcript_18590.nic	chr11	-	2797	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	3	149	combination_of_known_junctions	FALSE	canonical	3	122	junction_19	39.4462360709638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTTGTTACTATGT	-94490176	True	NA	9	True	AGTAAA	-27	NA	94493840	94419716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_18591.known	chr11	-	6841	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	60.246722649682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-94490180	True	NA	-24	True	AATAAA	-35	NA	94493844	94415569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_18592.known	chr11	-	2684	20	FSM	ENSG00000020922.13	ENST00000407439.7	2684	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	76.8217348630479	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	-94490179	True	NA	NA	False	AATAAA	-31	NA	94493843	94419865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492641_94492907_94493790
transcript_18593.nic	chr11	-	2648	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_19	39.4462360709638	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	-94490176	True	NA	NA	False	AATAAA	-31	NA	94493840	94419865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_18596.known	chr11	-	2588	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	63.281557783888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATAATGAAAAACTATG	-94490210	True	NA	NA	False	AATAAA	-21	NA	94493874	94419875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_18603.known	chr11	+	587	4	FSM	ENSG00000168876.9	ENST00000544514.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	37.7918274528002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGTGACTGTGGATGG	94492973	True	NA	NA	False	NA	NA	NA	94494003	94498214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603_94496952_94497901_94497965_94498070
transcript_18604.known	chr11	+	1908	3	FSM	ENSG00000168876.9	ENST00000544612.6	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	2.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	94492953	True	NA	9	True	AATAAA	-20	NA	94493983	94499578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603_94496952_94498070
transcript_18605.known	chr11	+	760	3	FSM	ENSG00000168876.9	ENST00000534911.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	31	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAATACCAGAGTGGCT	94492953	True	NA	NA	False	NA	NA	NA	94493983	94498263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603_94497119_94498070
transcript_18607.nic	chr11	+	1996	3	NIC	ENSG00000168876.9	novel	1908	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	39.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	94493000	True	NA	9	True	AATAAA	-20	NA	94494030	94499578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_94494171_94496603_94496952_94498070
transcript_18620.nnic	chr11	+	836	2	NNC	ENSG00000255666.7	novel	532	5	NA	NA	2872	4576	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTCTGTTTGAGTGTT	94645438	True	NA	29	True	AATAAA	-17	NA	94650350	94657460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_94650538_94656811
transcript_18621.nic	chr11	+	341	2	ISM	ENSG00000255666.7	ENST00000542479.1	532	5	2873	-2	2873	0	3prime_fragment	FALSE	canonical	3	540	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTGACACAATTATG	94645439	True	NA	27	True	AAGAAA	-24	NA	94650351	94651631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_94650538_94651476
transcript_18623.known	chr11	-	1522	7	FSM	ENSG00000150316.12	ENST00000279839.8	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	39.7058629871655	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTATCTTGGAGGAT	-94961182	True	NA	0	True	AATAAA	-17	NA	94973556	94962619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_18631.known	chr11	-	1113	6	FSM	ENSG00000150316.12	ENST00000621358.4	1113	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	38.1439379194126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACTGTAAAACGT	-94961212	True	NA	-40	True	ATTAAA	-21	NA	94973586	94963367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971488_94972054_94972194_94973497
transcript_18633.known	chr11	+	2951	3	FSM	ENSG00000186280.7	ENST00000335080.6	2951	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCAAATATTGTGT	94973440	True	NA	18	True	ATTAAA	-25	NA	94973708	94999519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94974069_94975653_94975749_94997023
transcript_18634.known	chr11	+	560	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAGAATAAAATTAGA	95068003	False	NA	-25	True	NA	NA	NA	95068057	95069088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95068184_95068654
transcript_18637.known	chr11	+	2211	5	FSM	ENSG00000245552.8	ENST00000543150.3	2215	5	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	3.35410196624968	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTGGCAGAATCT	95230382	False	NA	0	True	AATAAA	-12	NA	95230395	95234387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95230496_95231124_95232177_95232589_95232675_95232879_95232920_95233453
transcript_18639.known	chr11	-	2152	18	FSM	ENSG00000087053.20	ENST00000497683.6	2152	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	186.448504908725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	-95923751	False	NA	NA	False	NA	NA	NA	95923763	95835289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_18641.known	chr11	-	3536	18	FSM	ENSG00000087053.20	ENST00000675489.1	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	167.224131137232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTGTCCAAAGTT	-95918656	True	NA	-14	True	ATTAAA	-24	NA	95924093	95834091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_18643.known	chr11	-	3457	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	154.218544199457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-95918661	True	NA	-25	True	ATTAAA	-13	NA	95924098	95834102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
transcript_18644.known	chr11	-	4629	17	FSM	ENSG00000087053.20	ENST00000675196.1	4629	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	162.888849660589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923904	False	NA	-6	True	AATAAA	-16	NA	95923916	95832881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_18645.known	chr11	-	3420	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	140.234722318511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-95918659	True	NA	-10	True	ATTAAA	-28	NA	95924096	95834087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_18648.known	chr11	-	4504	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	122.425850574496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923852	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
transcript_18649.known	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_15	80.6985061131177	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-95918663	True	NA	-11	True	ATTAAA	-27	NA	95924100	95834088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
transcript_1865.known	chr1	-	1137	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	0	0	0	0	multi-exon	FALSE	canonical	2	96	junction_4	1612.29066470658	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	-25906980	False	NA	-42	True	NA	NA	NA	25906991	25900594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
transcript_18650.known	chr11	-	4632	16	FSM	ENSG00000087053.20	ENST00000676177.1	4632	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	159.034363861679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
transcript_18651.known	chr11	-	4582	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	144.309697833822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
transcript_18656.known	chr11	-	4495	15	FSM	ENSG00000087053.20	ENST00000346299.10	4495	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	78.4301326932813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95918670	True	NA	-4	True	AATAAA	-18	NA	95924107	95832879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
transcript_18657.known	chr11	-	4387	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	119.090858814022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923806	False	NA	-6	True	AATAAA	-16	NA	95923818	95832881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
transcript_18665.known	chr11	-	4601	16	FSM	ENSG00000087053.20	ENST00000393223.8	4601	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	128.47301489245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914334_95923874
transcript_18666.nic	chr11	+	2242	12	NIC	ENSG00000166037.11	novel	3141	11	NA	NA	17	187	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	152.303144858812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGAGTTTTTCTATAT	95779949	True	NA	19	True	ATTAAA	-19	NA	95790477	95831730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_18667.nic	chr11	+	2743	12	NIC	ENSG00000166037.11	novel	3141	11	NA	NA	17	-460	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	152.303144858812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCAACTTTCCTTAACA	95779949	True	NA	6	True	AATAAA	-19	NA	95790477	95832231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_18670.known	chr11	+	3141	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	49.0758596460622	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	95779969	True	NA	27	True	ATTAAA	-21	NA	95790497	95832693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_18677.known	chr11	-	3823	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	51.6898442636462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	-95789575	False	NA	-4	True	AATAAA	-16	NA	95789615	95768952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_18680.known	chr11	+	3098	10	FSM	ENSG00000166037.11	ENST00000325486.9	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	118.12799084985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	95779932	True	NA	25	True	ATTAAA	-19	NA	95790460	95832691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95827785_95828028_95829186_95829332_95831025
transcript_18683.known	chr11	-	2546	10	FSM	ENSG00000077458.13	ENST00000536839.1	2546	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	50.2912504969126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTCTCTTAATAATTT	-95789521	False	NA	NA	False	TTTAAA	-29	NA	95789561	95770114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95771651_95775921_95776024_95778821_95778955_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_18694.known	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	40.773425441361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	95780130	False	NA	14	True	AGTAAA	-18	NA	95790658	95823215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_18697.known	chr11	+	870	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	181.02927939977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	95779993	True	NA	NA	False	NA	NA	NA	95790521	95818903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
transcript_18698.known	chr11	+	1936	11	FSM	ENSG00000166037.11	ENST00000540830.5	1936	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	127.112391213445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTGTGGGTGTGATTT	95780004	True	NA	3	True	NA	NA	NA	95790532	95831543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812951_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_187.known	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9760.22235834691	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
transcript_18700.known	chr11	-	2817	11	FSM	ENSG00000149231.16	ENST00000679856.1	2817	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	52.1237949500993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96389925	False	NA	NA	False	AATAAA	-16	NA	96389936	96352778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96385936_96386021_96386253_96386294_96387529_96387614_96389843
transcript_18701.known	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	40.1149582642586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	-96389910	False	NA	NA	False	NA	NA	NA	96389921	96352804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18703.known	chr11	-	3156	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	35.6744539785358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96387752	True	NA	NA	False	AATAAA	-16	NA	96389880	96352778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
transcript_18704.known	chr11	-	2715	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	21.7124871621248	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAACCCTGTGTGTTC	-96387784	True	NA	NA	False	AATAAA	-22	NA	96389912	96352772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18706.known	chr11	-	2563	10	FSM	ENSG00000149231.16	ENST00000647080.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	44.7635764632115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGCAGAGTGAACAAATG	-96389910	False	NA	NA	False	AATAAA	-8	NA	96389921	96352786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96365126_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18718.known	chr11	-	2695	9	FSM	ENSG00000149231.16	ENST00000680763.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	46.5268739547372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAATGAACCCTGTGT	-96389925	False	NA	NA	False	AATAAA	-18	NA	96389936	96352776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96387529_96387614_96389843
transcript_18719.known	chr11	-	2594	8	FSM	ENSG00000149231.16	ENST00000679960.1	2594	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	47.6406617613696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96389910	False	NA	NA	False	AATAAA	-16	NA	96389921	96352778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96389843
transcript_18722.known	chr11	-	5328	7	FSM	ENSG00000149231.16	ENST00000679696.1	5328	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	49.468564653615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGAGCCAAATCATGA	-96387789	True	NA	NA	False	NA	NA	NA	96389917	96349240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96389843
transcript_18726.known	chr11	-	3972	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	28.7608675112556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	NA	False	NA	-7	True	AATAAA	-12	NA	96389956	96380538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18739.known	chr11	+	3140	2	FSM	ENSG00000183340.7	ENST00000332349.5	3140	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAAAGGTTTAA	96389009	True	NA	6	True	AATAAA	-20	NA	96390012	96393561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_96390074_96390482
transcript_18742.known	chr11	-	1865	2	FSM	ENSG00000248027.1	ENST00000501397.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGTCTTATTT	NA	False	NA	NA	False	TATAAA	-21	NA	100687955	100684161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_100685704_100687632
transcript_18743.known	chr11	+	2193	7	FSM	ENSG00000137691.13	ENST00000434758.7	2193	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	9.0921211313239	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAAATGTCTGTTTGC	102047329	True	NA	NA	False	CATAAA	-14	NA	102047436	102084554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_18745.known	chr11	+	845	6	FSM	ENSG00000137691.13	ENST00000526781.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	6.72309452558864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGGAGAACAATT	102047347	True	NA	NA	False	ATTAAA	-16	NA	102047454	102081435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214
transcript_18747.nnic	chr11	+	643	5	NNC	ENSG00000137691.13	novel	845	6	NA	NA	4	-8709	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	8.61321658847611	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTTTTTATCTCATTGC	102047333	True	NA	NA	False	AATAAA	-37	NA	102047440	102067402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102067224
transcript_18750.nic	chr11	+	1222	4	ISM	ENSG00000137691.13	ENST00000526781.5	845	6	-26	14039	-8	-8715	5prime_fragment	FALSE	canonical	2	30	junction_1	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGAATCTTTTTATCT	102047321	True	NA	NA	False	AATAAA	-31	NA	102047428	102067396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484
transcript_18753.known	chr11	+	1261	6	FSM	ENSG00000137691.13	ENST00000530659.1	1261	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	9.65401470891774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGGAATTTTTACAGAA	102047360	True	NA	NA	False	AATAAA	-16	NA	102047467	102083419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_18754.nic	chr11	+	1068	2	ISM	ENSG00000023445.16	ENST00000673846.1	4846	10	-28	14461	16	670	5prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCACAGTGACTTGC	NA	False	NA	NA	False	NA	NA	NA	102317465	102322798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_102317572_102321836
transcript_18758.nnic	chr11	+	2486	10	NIC	ENSG00000110330.10	novel	3764	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	93.5554235945229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344577	True	NA	25	True	AATAAA	-15	NA	102347210	102378670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_102347377_102348597_102348720_102350000_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18760.known	chr11	+	2617	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1617992842344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	102344613	True	NA	24	True	AATAAA	-14	NA	102347246	102378669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18763.nnic	chr11	+	2186	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	94.1617992842344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344577	True	NA	25	True	AATAAA	-15	NA	102347210	102378670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_102347377_102348597_102348765_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18767.known	chr11	+	3764	9	FSM	ENSG00000110330.10	ENST00000227758.7	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	26.2032321479622	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344580	True	NA	25	True	AATAAA	-15	NA	102347213	102378670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102347377_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18768.known	chr11	+	1927	9	FSM	ENSG00000110330.10	ENST00000530675.5	1927	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.0220369177592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTGAAGCCATCTAAA	102344580	True	NA	NA	False	CATAAA	-22	NA	102347213	102378236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102347377_102350000_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18772.nnic	chr11	+	1192	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11978	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	139.401099947836	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102374592	True	NA	25	True	AATAAA	-15	NA	102374719	102378670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_102374934_102377495_102377751_102377856_102377899_102377989
transcript_18774.nic	chr11	+	272	2	ISM	ENSG00000110330.10	ENST00000534646.5	562	3	-6	1532	0	-310	5prime_fragment	FALSE	canonical	3	339	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTAATTTTGTGTAT	102344577	True	NA	34	True	TATAAA	-21	NA	102347210	102348703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_102347377_102348597
transcript_18775.known	chr11	-	3304	5	FSM	ENSG00000152558.15	ENST00000398136.7	3304	5	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	23.4347498386477	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTGTGATTTTG	-102438326	True	NA	-7	True	AATAAA	-19	NA	102452765	102396331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_102398892_102401538_102401693_102401915_102402207_102448811_102448869_102452523
transcript_18778.known	chr11	+	692	2	FSM	ENSG00000255337.1	ENST00000528717.1	692	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAAAAATCATCC	102452850	True	NA	-19	True	NA	NA	NA	102452918	102462008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102453050_102461447
transcript_18782.known	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	402.000304599336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-103064939	True	NA	-29	True	NA	NA	NA	103092177	103062170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
transcript_18783.known	chr11	-	12675	8	FSM	ENSG00000137692.12	ENST00000260247.10	12675	8	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_5	68.1007656764172	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTAATCTTTTGTGT	-103064922	True	NA	NA	False	AATAAA	-42	NA	103092160	103050685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091786
transcript_18786.known	chr11	-	727	7	FSM	ENSG00000137692.12	ENST00000529294.5	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	545.867708841213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGCAAACCTTTCA	-103091850	False	NA	NA	False	AAAAAG	-31	NA	103091861	103062345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091683
transcript_18787.nic	chr11	-	1226	7	NIC	ENSG00000137692.12	novel	1535	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	421.289554687615	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	-103064977	True	NA	-31	True	AATAAA	-10	NA	103092215	103062097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091786
transcript_1879.known	chr1	-	2947	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_3	438.453595669548	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTTG	-25847891	True	NA	-15	True	AATAAA	-17	NA	25906417	25900567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
transcript_18792.known	chr11	-	1535	8	FSM	ENSG00000137692.12	ENST00000531571.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	414.101387565501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	-103064923	True	NA	-31	True	AATAAA	-10	NA	103092161	103062097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091515
transcript_18794.nic	chr11	+	1799	10	ISM	ENSG00000187240.17	ENST00000648198.1	4528	25	140	34317	28	-34317	5prime_fragment	FALSE	canonical	2	4	junction_9	2.68512132746546	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTGTTTACAAAAATGAG	103107834	True	NA	NA	False	AGTAAA	-12	NA	103109549	103121785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_103109770_103113536_103113708_103114102_103114239_103115176_103115296_103116569_103116715_103117630_103117864_103120446_103120582_103120688_103120803_103120924_103121037_103121371
transcript_18796.known	chr11	-	1002	5	FSM	ENSG00000256422.7	ENST00000666753.1	1002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTAGTTTTCAAGGC	-104609323	True	NA	NA	False	NA	NA	NA	104609373	104568233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_104568922_104569047_104569132_104572556_104572598_104595481_104595534_104609236
transcript_18798.known	chr11	-	3683	2	FSM	ENSG00000256422.7	ENST00000653654.1	3683	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTCCAGTATGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	104609481	104560270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_104563709_104609236
transcript_1880.known	chr1	-	948	5	FSM	ENSG00000117632.23	ENST00000426559.6	948	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1588.08066152195	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCTTGCCTTGATGGT	-25847940	True	NA	NA	False	NA	NA	NA	25906466	25885439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25885870_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_18800.known	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	24.1513974750945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610015	False	NA	8	True	AATAAA	-18	NA	105610028	105913110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_18801.known	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	19.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	105608937	False	NA	26	True	AATAAA	-35	NA	105610120	105614436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_105610429_105610907_105611086_105612275
transcript_18802.known	chr11	+	2778	10	FSM	ENSG00000152578.13	ENST00000428631.6	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	24.6506454476887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610665	False	NA	8	True	AATAAA	-18	NA	105610723	105913110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_18807.known	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-106017962	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106010111_106010455_106011068_106020961
transcript_18808.nic	chr11	-	3214	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	52.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-106017947	True	NA	2	True	AATAAA	-43	NA	106022225	106007898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_106010111_106010455_106011068_106021835
transcript_18810.known	chr11	-	948	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	38.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGATGAGCCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	106022403	106009983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106010111_106010455_106011068_106022194
transcript_18813.known	chr11	+	2767	6	FSM	ENSG00000149313.11	ENST00000278618.9	2767	6	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	43.0970996703955	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGAGCCTGACACTG	106071510	True	NA	21	True	AATAAA	-23	NA	106077661	106098695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_106077894_106079466_106079693_106090556_106090679_106091315_106091478_106094582_106094655_106096742
transcript_18816.known	chr11	+	1252	5	FSM	ENSG00000149313.11	ENST00000525660.1	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	242.679186375758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAACATGGAAACG	106071506	True	NA	NA	False	AATGAA	-22	NA	106077657	106097298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_106077894_106079466_106079693_106091315_106091478_106094582_106094655_106096742
transcript_18821.known	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_3	23.4141457717813	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-106076398	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
transcript_18823.known	chr11	-	3751	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	33.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077459	106051097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106054456_106058864_106059110_106077311
transcript_18826.known	chr11	-	3278	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-19	-15	-19	15	multi-exon	FALSE	canonical	3	108	junction_15	13.5825045211015	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	-107454524	True	NA	0	True	ATTAAA	-36	NA	107457844	107326344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_1883.known	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	9.37869927015468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	-25997147	True	NA	-7	True	AAAAAG	-16	NA	25998063	25959766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
transcript_18831.nnic	chr11	-	1541	7	NNC	ENSG00000152404.16	novel	2955	16	NA	NA	-19551	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	48.7704373115062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATGATTCAAATTTGT	-107373226	True	NA	-15	True	ATTAAA	-21	NA	107373281	107326359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107373103
transcript_18835.known	chr11	-	4067	12	FSM	ENSG00000137760.15	ENST00000428149.7	4067	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	5.39053348377222	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTCTGCTCATT	-107564971	True	NA	-1	True	AATAAA	-19	NA	107565735	107502726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565600
transcript_18837.known	chr11	-	2769	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_5	19.5040550467154	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	-107857336	True	NA	NA	False	ATTAAA	-25	NA	107858787	107790990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_18838.nic	chr11	-	1105	7	ISM	ENSG00000110660.15	ENST00000525815.6	2769	8	-35	11899	-14	3955	5prime_fragment	FALSE	canonical	3	219	junction_4	21.0666930379582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCATTGGTCAGGCCT	-107857371	True	NA	NA	False	AATAAA	-22	NA	107858822	107802889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_18840.known	chr11	+	1885	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTCAAAATTATTAAT	107926030	True	NA	NA	False	AGTAAA	-17	NA	107928447	107963482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_107928796_107961945
transcript_18842.known	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	14.0352290441228	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	108006634	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
transcript_18845.known	chr11	+	1498	13	FSM	ENSG00000075239.14	ENST00000673531.1	1498	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	161.044227017163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAGATAAGCTGTTTC	108116124	True	NA	8	True	NA	NA	NA	108121566	108147470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108127885_108127980_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_18850.known	chr11	+	1537	12	FSM	ENSG00000075239.14	ENST00000265838.9	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_7	24.5336672033816	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	108116124	True	NA	27	True	AATAAA	-37	NA	108121566	108147603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_18861.known	chr11	+	1222	9	FSM	ENSG00000075239.14	ENST00000672907.1	1222	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	144.977961687285	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	108116124	True	NA	27	True	AATAAA	-37	NA	108121566	108147603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108131906_108131955_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_18866.known	chr11	-	605	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGATGACTCTTAATATT	-108009178	True	NA	2	True	AGTAAA	-19	NA	108009282	108008677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_108008700_108009300
transcript_18867.known	chr11	+	1345	6	FSM	ENSG00000075239.14	ENST00000299355.10	1345	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	168.245772606625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATAATGCAAGTGATTT	108116124	True	NA	NA	False	ATTAAA	-16	NA	108121566	108136939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108136069
transcript_18868.known	chr11	+	631	7	FSM	ENSG00000075239.14	ENST00000672008.1	631	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	155.289782879192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTAGTGGTGAAAGAAGA	108116150	True	NA	NA	False	NA	NA	NA	108121592	108141612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134297_108138897_108139042_108140064_108140216_108141604
transcript_18869.known	chr11	-	6113	18	FSM	ENSG00000149308.17	ENST00000278612.9	6113	18	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_2	8.39426398322504	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGATTCATAGTTAACT	-108219713	True	NA	NA	False	AATAAA	-15	NA	108222638	108157214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_108159020_108160879_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_18872.known	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	2.94392028877595	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	108220816	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
transcript_18879.known	chr11	+	3217	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	21.8603621316288	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	108661728	True	NA	13	True	AATAAA	-21	NA	108665068	108940927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
transcript_18883.known	chr11	+	3144	4	FSM	ENSG00000137714.3	ENST00000260270.3	3144	4	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	5.18544972870135	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGTATAAAGGTGAT	110427992	True	NA	NA	False	ATTAAA	-20	NA	110429947	110464884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_110430306_110435833_110435959_110456917_110457048_110462353
transcript_18887.known	chr11	-	508	2	FSM	ENSG00000271584.2	ENST00000603154.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATAATTTTGCATTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	111097357	111091931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111092312_111097229
transcript_18891.known	chr11	+	1332	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.39081998549647	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	111299627	False	NA	6	True	AATAAA	-18	NA	111299732	111308735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_18894.known	chr11	-	5442	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	-111299671	False	NA	NA	False	AATAAA	-19	NA	111299814	111293445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111298667_111299593
transcript_18895.known	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	183.174403840226	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-111760830	True	NA	-9	True	AATAAA	-23	NA	111766382	111726907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_18899.known	chr11	-	5553	15	FSM	ENSG00000137713.16	ENST00000527614.6	5553	15	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	62.6928453425338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGTCTTTCCTGTG	-111760837	True	NA	NA	False	NA	NA	NA	111766389	111737876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_18906.known	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	157.013247094994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	-111760816	True	NA	32	True	NA	NA	NA	111766368	111741320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_18910.known	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	20.1834696962537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	-111871289	False	926	-6	True	AATAAA	-17	NA	111871301	111786283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_18912.known	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_14	10.903332199893	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	-111870607	True	NA	22	True	AATAAA	-45	NA	111871533	111786255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_18914.known	chr11	-	6158	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	16.4651766105416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCTTAATGTGA	-111871569	False	NA	-19	True	AATAAA	-15	NA	111871581	111782194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_18918.known	chr11	+	509	5	FSM	ENSG00000137720.8	ENST00000530799.5	509	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	58.0215477215146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGAACTGGATCCTCC	111877516	False	NA	NA	False	NA	NA	NA	111879560	111883805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879606_111881484_111881616_111882367_111882599_111883135_111883203_111883770
transcript_18919.known	chr11	-	2774	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	3.96074487943871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGTCTGTTTGACTC	-111878943	True	NA	NA	False	AATAAA	-20	NA	111879165	111874055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
transcript_18922.known	chr11	+	534	4	FSM	ENSG00000137720.8	ENST00000528125.5	534	4	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	51.8609251320834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGATCTTAATATTG	111878847	True	NA	NA	False	NA	NA	NA	111878934	111883900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879041_111882367_111882599_111883135_111883203_111883770
transcript_18923.known	chr11	+	2568	4	FSM	ENSG00000137720.8	ENST00000260276.8	2568	4	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_3	15.5777619273972	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCTGGGCTACTA	111877496	True	NA	NA	False	AATAAA	-14	NA	111879540	111885975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879606_111882367_111882599_111883135_111883203_111883770
transcript_18925.known	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.62635271879577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	-111879445	True	NA	NA	False	NA	NA	NA	111879457	111874758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
transcript_18927.known	chr11	+	599	3	FSM	ENSG00000137720.8	ENST00000530214.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	48	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTATCCCTTTTTTT	111877497	True	NA	NA	False	AATAAA	-22	NA	111879541	111884074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879606_111882367_111882599_111883770
transcript_18928.known	chr11	+	1104	4	FSM	ENSG00000149300.10	ENST00000278601.6	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	2.94392028877595	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCGCGTTTTCTGGG	111918590	True	NA	12	True	AATAAA	-15	NA	111918912	111926871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111919005_111924325_111924364_111925652_111925715_111925959
transcript_1893.nic	chr1	-	1418	8	NIC	ENSG00000158006.14	novel	3487	11	NA	NA	-17	-695	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	27.3637627201392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTTTCTATTTATTTC	-25997164	True	NA	-17	True	NA	NA	NA	25998080	25961464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25998024
transcript_18930.known	chr11	+	882	4	FSM	ENSG00000149300.10	ENST00000527286.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.589211407093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATTGTTGCTCCTGCTC	111918674	False	NA	NA	False	NA	NA	NA	111918996	111926478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111919260_111924325_111924364_111925652_111925715_111925959
transcript_18931.known	chr11	-	1107	4	FSM	ENSG00000109846.9	ENST00000527899.6	1107	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	5.31245915016974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGTCTTGTGTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	111913347	111908625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913104
transcript_18932.known	chr11	+	843	2	FSM	ENSG00000170276.6	ENST00000304298.4	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTACTGCTCCCTA	111912666	True	NA	NA	False	AATAAA	-16	NA	111912733	111914093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111912924_111913440
transcript_18933.known	chr11	-	941	4	FSM	ENSG00000109846.9	ENST00000616970.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.73488351136175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGTGTTTGAA	-111913121	True	NA	0	True	AATAAA	-18	NA	111913213	111908623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913138
transcript_18934.nic	chr11	+	1982	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-157	46658	-157	0	5prime_fragment	FALSE	canonical	3	30	junction_3	3.20156211871642	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	111937126	True	NA	NA	False	ATTAAA	-15	NA	111937185	111975995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_18936.known	chr11	+	3825	14	FSM	ENSG00000150768.17	ENST00000681316.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	188.15475815868	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043471_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_1894.known	chr1	+	638	3	FSM	ENSG00000142684.9	ENST00000374266.7	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	9	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166326	True	NA	19	True	AATAAA	-19	NA	26169907	26170873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26170184_26170417_26170481_26170574
transcript_18944.known	chr11	+	3723	13	FSM	ENSG00000150768.17	ENST00000681339.1	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	174.516713621743	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_1895.known	chr1	+	698	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166360	True	NA	19	True	AATAAA	-19	NA	26169941	26170873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26170184_26170417
transcript_18950.known	chr11	+	3517	12	FSM	ENSG00000150768.17	ENST00000393051.5	3517	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	197.79470114655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGTTTAATTTTTG	112016265	True	NA	4	True	ATTAAA	-15	NA	112025439	112064390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_18953.known	chr11	+	3686	6	FSM	ENSG00000150776.18	ENST00000393047.8	3686	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.3515181253156	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072971	True	NA	8	True	AATAAA	-19	NA	112074298	112085150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_18962.known	chr11	+	3739	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5201744180519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072959	True	NA	8	True	AATAAA	-19	NA	112074286	112085150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_18963.known	chr11	+	2322	6	FSM	ENSG00000150776.18	ENST00000420986.6	2322	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.7348280640733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGGTCTTGGTTCTG	NA	False	NA	4	True	AGTAAA	-16	NA	112074085	112084134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_1897.known	chr1	+	2507	21	FSM	ENSG00000142675.18	ENST00000482227.5	2507	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	24.8311799961258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTCTACATGTAACTT	26176116	True	NA	11	True	AATAAA	-16	NA	26177511	26189882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182484_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_18971.known	chr11	-	1090	6	FSM	ENSG00000150773.12	ENST00000280350.10	1090	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	2.78567765543682	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	-112073965	True	NA	NA	False	ATTAAA	-21	NA	112074017	112067797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073979
transcript_18972.known	chr11	+	355	5	FSM	ENSG00000150776.18	ENST00000526879.5	355	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	29.8705540624877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAATAAAAAGTTCTAT	112072988	True	NA	-23	True	AATGAA	-41	NA	112074315	112080512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112074886_112074917_112075566_112075644_112078214_112078316_112080408
transcript_18975.known	chr11	+	2246	4	FSM	ENSG00000150776.18	ENST00000530104.2	2246	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.6010510323911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAAAGCTTCTATTTT	112072982	True	NA	NA	False	ATTAAA	-18	NA	112074309	112082427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408
transcript_18977.known	chr11	-	1155	3	FSM	ENSG00000150779.12	ENST00000509359.6	1155	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	76	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATGTGTATTCCTTG	-112070159	True	NA	NA	False	AAGAAA	-31	NA	112086798	112084799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112085463_112085977_112086311_112086639
transcript_18979.known	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	209.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	-112070083	True	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112085463_112085966_112086311_112086639
transcript_1898.known	chr1	+	624	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAACATGGTGAA	26176107	True	NA	NA	False	NA	NA	NA	26177502	26181083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26177600_26180452_26180611_26180714
transcript_18981.known	chr11	-	805	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	-112070159	True	NA	NA	False	AAGAAA	-14	NA	112086798	112084816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112085463_112086639
transcript_18982.nnic	chr11	+	1299	6	NIC	ENSG00000255292.9	novel	566	6	NA	NA	-31	-6804	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1104.61801542434	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTGTATGAGTTGGCT	112073796	True	NA	NA	False	AATAAA	-20	NA	112086871	112172556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_112086960_112087856_112087974_112088866_112089012_112170418_112170531_112170622_112170675_112171771
transcript_18983.known	chr11	+	861	5	FSM	ENSG00000204370.13	ENST00000526592.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1128.81982065341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAGACTCACAGTATAA	112073823	True	NA	NA	False	NA	NA	NA	112086898	112095212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112093079_112093210_112094804
transcript_18986.known	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1066.40923976992	3314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	112073797	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
transcript_18987.known	chr11	+	905	3	FSM	ENSG00000204370.13	ENST00000528048.5	905	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCTAAATCCTAGGA	112073797	True	NA	NA	False	TTTAAA	-28	NA	112086872	112095505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112094804
transcript_18988.known	chr11	+	790	3	FSM	ENSG00000204370.13	ENST00000525291.5	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGACAGTGTTTAATT	112073823	True	NA	NA	False	AATAAA	-12	NA	112086898	112095388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112088866_112089012_112094804
transcript_18990.known	chr11	+	1074	4	FSM	ENSG00000204370.13	ENST00000528021.6	1074	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1066.40923976992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATAATGGCTTGGTT	112073797	True	NA	NA	False	AATAAA	-17	NA	112086872	112120016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112119291
transcript_18991.known	chr11	-	1115	6	FSM	ENSG00000150782.12	ENST00000280357.12	1115	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.979795897113271	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAACTGTCTGAATT	-112163996	True	NA	NA	False	AATAAA	-29	NA	112164094	112143259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112143818_112148602_112148737_112150071_112150207_112153591_112153604_112154974_112155062_112163905
transcript_18994.known	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	20.5387438759044	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	112224226	False	NA	NA	False	AATAAA	-18	NA	112226427	112233973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
transcript_19.known	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00051_+_0_300
transcript_19000.known	chr11	+	846	5	FSM	ENSG00000150787.8	ENST00000528679.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	185.350175343861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGCTTATGTGACTT	112224165	True	NA	NA	False	AATATA	-6	NA	112226366	112233909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112226527_112228593_112228674_112230625_112230683_112233162_112233234_112233431
transcript_19003.known	chr11	-	517	3	FSM	ENSG00000255129.7	ENST00000533504.2	556	3	38	1	38	-1	multi-exon	FALSE	canonical	2	9	junction_2	6	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTTATTAT	-113314317	True	NA	NA	False	AATAAA	-14	NA	113314437	113279382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113279650_113280490_113280633_113314329
transcript_19004.known	chr11	+	2256	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	5.01562185427032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	113314248	True	NA	7	True	AATAAA	-18	NA	113314582	113366387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_19008.known	chr11	-	2873	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	18.3985506675571	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	-113770473	True	NA	-5	True	AATAAA	-16	NA	113773692	113733186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_19009.nnic	chr11	-	2736	15	NIC	ENSG00000086827.9	novel	2873	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	64.8629638671611	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	-113770528	True	NA	-5	True	AATAAA	-16	NA	113773747	113733186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_1901.known	chr1	+	1078	4	FSM	ENSG00000236155.7	ENST00000451482.2	1083	4	5	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	16.739839372653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	NA	False	NA	NA	False	AATAAA	-44	NA	26225319	26229840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26225704_26227403_26227556_26227793_26227997_26229501
transcript_19012.known	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_7	61.8321047973742	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-113865214	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_19017.known	chr11	+	2205	9	FSM	ENSG00000166736.12	ENST00000504030.7	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	6.26498204307083	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	113974335	True	NA	5	True	AATAAA	-19	NA	113975107	113990313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113989464
transcript_1902.nnic	chr1	+	745	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	186	4	181	0	multi-exon	FALSE	canonical	3	31	junction_1	7	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	26224930	True	NA	NA	False	AATAAA	-44	NA	26225500	26229840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26225704_26227793_26227997_26229501
transcript_19025.known	chr11	+	1080	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	0	0	0	0	multi-exon	TRUE	canonical	3	756	junction_4	81.5381642068438	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426082	True	NA	32	True	AATAAA	-39	NA	114439466	114450279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_19027.known	chr11	+	791	7	FSM	ENSG00000076043.11	ENST00000539754.5	791	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	328.399993233184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGATGGCTTGGCAGAG	114426086	True	NA	NA	False	NA	NA	NA	114439470	114450039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444585_114444653_114445978_114446088_114447825_114447880_114449845
transcript_19037.known	chr11	+	664	6	FSM	ENSG00000076043.11	ENST00000539119.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	354.297389208557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTTAACTTGCATCTC	114426197	False	NA	NA	False	NA	NA	NA	114439581	114450062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_19038.known	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	257.315346413695	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	114394801	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
transcript_19039.known	chr11	+	4243	5	FSM	ENSG00000076053.12	ENST00000540163.5	4243	5	0	0	0	0	multi-exon	TRUE	canonical	3	263	junction_3	155.551438437579	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	114398702	True	NA	NA	False	AATAAA	-18	NA	114400029	114410607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405708_114405800_114407444
transcript_19044.known	chr11	+	449	5	FSM	ENSG00000076043.11	ENST00000538198.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	383.70911834357	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATGAAAAGAAGAGGAAAA	114426161	True	NA	NA	False	AAGAAA	-6	NA	114439545	114449917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114445978_114446088_114447825_114447880_114449845
transcript_19049.known	chr11	+	539	4	FSM	ENSG00000076043.11	ENST00000543131.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	440.685324869748	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCGGTTAACTTG	114426126	True	NA	NA	False	NA	NA	NA	114439510	114450056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114445978_114446088_114447825_114447880_114449845
transcript_1905.known	chr1	+	3935	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_13	50.6650446122584	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228947	True	NA	15	True	AATAAA	-15	NA	26234201	26278808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_19050.known	chr11	+	452	3	FSM	ENSG00000076043.11	ENST00000544196.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTTTTTTTCTGTT	114426081	True	NA	4	True	AATAAA	-16	NA	114439465	114441902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114441744
transcript_19051.known	chr11	+	848	3	FSM	ENSG00000076043.11	ENST00000544010.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_2	42.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGCAAAGATGGCAG	114426050	True	NA	NA	False	AAGAAA	-4	NA	114439434	114444378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114443855
transcript_19053.known	chr11	+	552	2	FSM	ENSG00000076043.11	ENST00000543243.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTATATGTCTTTGT	114426110	True	NA	NA	False	NA	NA	NA	114439494	114441026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655
transcript_19054.known	chr11	-	1980	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTCCTAAGGAACT	-114399839	True	NA	NA	False	AATAAA	-19	NA	114400511	114398531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_114398500_114400500
transcript_19055.known	chr11	+	710	3	FSM	ENSG00000076043.11	ENST00000539275.5	710	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	421.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426099	True	NA	32	True	AATAAA	-39	NA	114439483	114450279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114449845
transcript_19056.known	chr11	-	1246	10	FSM	ENSG00000182985.18	ENST00000616271.4	1246	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	52.3216547478724	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTCAATGAGGTGT	NA	False	NA	-83	True	AAGAAA	-28	NA	115240421	115176466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_115176593_115178643_115178776_115198405_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273
transcript_19059.known	chr11	-	8588	10	FSM	ENSG00000182985.18	ENST00000452722.7	8588	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	33.648509955453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-115501122	True	NA	NA	False	NA	NA	NA	115504415	115169235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_115176593_115178643_115178776_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273_115240421_115504270
transcript_19061.nic	chr11	-	1270	8	ISM	ENSG00000182985.18	ENST00000545380.5	2373	9	263967	986	0	0	3prime_fragment	FALSE	canonical	2	15	junction_2	55.7724970623642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTTCT	NA	False	NA	57	True	NA	NA	NA	115240422	115176326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_115176593_115178643_115178776_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273
transcript_19064.nic	chr11	-	1133	8	ISM	ENSG00000182985.18	ENST00000616271.4	1246	10	-1	21795	0	-7653	5prime_fragment	FALSE	canonical	3	49	junction_1	45.52505477476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATGTCGAGTCTTGT	NA	False	NA	NA	False	CATAAA	-24	NA	115240422	115198261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273
transcript_19066.known	chr11	-	1112	7	FSM	ENSG00000182985.18	ENST00000541434.5	1112	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	17.7576274691563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAAGAAGCCTGGCC	-115501101	True	NA	NA	False	NA	NA	NA	115504394	115214489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273_115240421_115504270
transcript_19070.known	chr11	-	2192	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	13.4329611197399	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	-116769194	True	NA	-10	True	AATAAA	-22	NA	116772987	116748172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_19074.known	chr11	-	6539	14	FSM	ENSG00000109917.11	ENST00000227322.8	6539	14	0	0	0	0	multi-exon	TRUE	canonical	3	585	junction_6	32.8363343275556	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGTTAGAATTCATT	-116781782	True	NA	2	True	AATAAA	-22	NA	116788023	116773798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481_116787644_116787819
transcript_19075.known	chr11	+	4175	6	FSM	ENSG00000168092.14	ENST00000527958.6	4175	6	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	56.1177333825948	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTGTCTTTCTGTC	117124582	True	NA	23	True	TATAAA	-19	NA	117144286	117171045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117167420
transcript_19080.known	chr11	+	1056	6	FSM	ENSG00000168092.14	ENST00000529887.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	268.185309068189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTCATTGGAACAAGG	117124593	True	NA	NA	False	AGTAAA	-27	NA	117144297	117176422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117175905
transcript_19081.known	chr11	-	4197	17	FSM	ENSG00000160613.15	ENST00000320934.8	4197	17	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_16	18.1482609359685	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTAGCCTGTCATGCCG	-117229945	True	NA	NA	False	NA	NA	NA	117232073	117204336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117230348_117230469_117232026
transcript_19083.known	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	35.3447308661418	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	117191970	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_19084.known	chr11	+	1477	5	FSM	ENSG00000149591.17	ENST00000278968.10	1477	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.817650377196	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTCAGGCCTGGCTG	117191994	True	NA	7	True	NA	NA	NA	117199393	117204782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_19091.known	chr11	+	3477	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	10.2720643554472	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAACTTTTTAAAAAAA	117230841	True	NA	NA	False	ATTAAA	-15	NA	117232670	117286454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_19095.known	chr11	+	2695	15	FSM	ENSG00000167257.11	ENST00000531452.5	2695	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	21.7443401033605	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTAGTTTGACTTCTT	117230906	True	NA	6	True	GATAAA	-31	NA	117232735	117285688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117232776_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_1910.known	chr1	-	2043	16	NIC	ENSG00000158062.21	novel	1944	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	34.6288255006657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	26318363	26282283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591_26306705_26318046
transcript_19103.nic	chr11	+	1115	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-30	39442	16	172	5prime_fragment	FALSE	canonical	3	68	junction_1	11.2356575241505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTAGTTTCTTTCC	117230811	True	NA	NA	False	AATAAA	-44	NA	117232640	117247012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_19106.known	chr11	+	585	5	FSM	ENSG00000110274.16	ENST00000527609.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.12414379544733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGACCCCCCCAAA	117327221	False	NA	NA	False	AAAAAG	-17	NA	117328084	117351959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_19107.known	chr11	+	492	4	FSM	ENSG00000110274.16	ENST00000533570.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.2736184954957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGACCCCCCCAAAA	117328091	True	NA	NA	False	AAAAAG	-18	NA	117328102	117351960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117328209_117338565_117338669_117344165_117344278_117351789
transcript_19109.known	chr11	-	579	9	FSM	ENSG00000137726.17	ENST00000530956.6	579	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	88.6904729945669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACAGCCCTTTCCCCA	-117874670	True	NA	NA	False	AAGAAA	-12	NA	117876689	117838207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117844109_117844207_117876591
transcript_19112.known	chr11	-	1678	8	FSM	ENSG00000137726.17	ENST00000526014.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	13.2649607490361	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCGGAGGTGCTTTCC	-117874639	True	NA	-9	True	AATAAA	-18	NA	117876658	117836980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_19114.known	chr11	-	669	7	FSM	ENSG00000137726.17	ENST00000584394.5	669	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	76.8288140391785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCCACATGGCCATCT	-117874645	True	NA	NA	False	NA	NA	NA	117876664	117837945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117838278_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_19115.known	chr11	-	991	6	FSM	ENSG00000137731.14	ENST00000534383.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.09544511501033	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACCTGCCTGCCTGTCT	NA	False	NA	-7	True	AATAAA	-25	NA	117824744	117820146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117824161
transcript_19117.known	chr11	-	3983	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.65329983228432	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGTGTGTGCATATC	-118252110	True	NA	1	True	AATAAA	-22	NA	118252365	118226689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
transcript_19118.known	chr11	-	2622	6	FSM	ENSG00000149573.9	ENST00000278937.7	2622	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.68328157299975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTATATACATATCTA	-118264230	True	NA	3	True	AATAAA	-33	NA	118264297	118253415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118255234_118257237_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_19119.known	chr11	-	1370	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.48746859276655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTATCTGCTTATTCT	NA	False	NA	NA	False	AATAAA	-37	NA	118264536	118256910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_19120.known	chr11	-	701	5	FSM	ENSG00000167286.10	ENST00000300692.9	701	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGCCTGGGCTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	118342705	118339074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118339228_118339450_118339495_118339774_118339907_118340374_118340594_118342552
transcript_19121.known	chr11	-	1819	13	FSM	ENSG00000118096.10	ENST00000264020.6	1819	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	25.648261799454	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-118564998	True	NA	NA	False	AGTAAA	-17	NA	118566035	118544542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_19122.known	chr11	-	1562	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_9	13.0371370380448	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-118564894	True	NA	NA	False	AGTAAA	-17	NA	118565931	118544542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
transcript_19125.known	chr11	+	3994	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_7	86.2950723168643	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	118554896	True	NA	17	True	ATTAAA	-30	NA	118572408	118603033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_19128.known	chr11	+	2420	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.2619823677497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	118530424	True	NA	15	True	AATAAA	-15	NA	118531191	118535829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_19129.known	chr11	+	1456	9	FSM	ENSG00000149582.16	ENST00000354284.8	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	19.2337593829184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	118530431	True	NA	NA	False	NA	NA	NA	118531198	118546484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
transcript_1913.known	chr1	-	1555	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	27.4551813370176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-26305448	True	NA	NA	False	AATAAA	-15	NA	26306632	26282283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_19139.known	chr11	+	2395	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.3614503006396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTCTGCTTCATTTC	118531044	False	NA	18	True	AATAAA	-18	NA	118531087	118535832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_1914.known	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_11	30.7649997090946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305456	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_19140.known	chr11	+	2228	8	FSM	ENSG00000149582.16	ENST00000442938.6	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	22.8410657744836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATAAGTGTTATCA	118531044	False	NA	NA	False	AATAAA	-13	NA	118531087	118547280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118546118
transcript_19153.known	chr11	+	575	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3261.66790154976	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354384	True	NA	16	True	AATAAA	-17	NA	118401618	118409199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
transcript_19154.known	chr11	+	900	4	FSM	ENSG00000167283.9	ENST00000529790.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3538.70374886373	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTAGAGTACTTGT	118354375	True	NA	NA	False	NA	NA	NA	118401609	118409577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118405656_118405710_118406936_118407098_118408999
transcript_19158.known	chr11	+	336	3	FSM	ENSG00000167283.9	ENST00000533172.5	336	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3569.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354387	True	NA	16	True	AATAAA	-17	NA	118401621	118409199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118406936_118406977_118408999
transcript_19159.known	chr11	+	1121	3	FSM	ENSG00000167283.9	ENST00000300688.8	1121	3	0	0	0	0	multi-exon	FALSE	canonical	3	7155	junction_1	213	2830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTCTGGAGCGATT	118354371	True	NA	5	True	AATAAA	-17	NA	118401605	118409847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118406936_118407098_118408999
transcript_19161.known	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3787	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354398	True	NA	16	True	AATAAA	-17	NA	118401632	118409199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401729_118406936_118407098_118408999
transcript_19164.known	chr11	+	3128	15	FSM	ENSG00000019144.20	ENST00000534140.2	3128	15	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	65.5359381078311	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118631954	False	NA	15	True	AATAAA	-15	NA	118631975	118658025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118632054_118632158_118632297_118634922_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_19165.nic	chr11	+	3006	13	NIC	ENSG00000019144.20	novel	3128	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	42.6347536901789	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118634745	True	NA	15	True	AATAAA	-15	NA	118634940	118658025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_19167.nic	chr11	+	546	2	ISM	ENSG00000019144.20	ENST00000527500.5	483	4	-83	3522	-37	-3522	5prime_fragment	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGATGTGATTGTAAT	118634745	True	NA	NA	False	ATTAAA	-16	NA	118634940	118635715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_118635164_118635392
transcript_19170.known	chr11	-	6152	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	141.016932132028	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTATGTC	-118790857	False	25289	-4	True	AATAAA	-17	NA	118790948	118747765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_19172.known	chr11	-	6128	14	FSM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	50.2005445643393	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-118765875	True	NA	-1	True	AATAAA	-20	NA	118791164	118747762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_19178.nnic	chr11	-	2051	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	-75	-545	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_13	123.137100672909	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCACTGTGTGCTG	-118790932	False	NA	-6	True	AATATA	-15	NA	118791023	118751909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_19183.nnic	chr11	-	1979	13	NNC	ENSG00000110367.14	novel	1936	13	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_12	124.361117315663	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118790932	False	NA	-38	True	AATAAA	-13	NA	118791023	118754588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_19184.nic	chr11	-	1975	13	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	-66	6826	-66	0	5prime_fragment	FALSE	canonical	3	455	junction_12	34.2039430800342	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118791139	False	NA	-38	True	AATAAA	-13	NA	118791230	118754588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_1919.known	chr1	-	2542	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	28.4608649435208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305452	True	NA	NA	False	AATAAA	-17	NA	26306636	26282281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_19192.nic	chr11	-	1422	5	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	19871	0	-7	5prime_fragment	FALSE	canonical	3	455	junction_4	44.6878059430087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGCGGCTGAGGTC	-118765875	True	NA	NA	False	NA	NA	NA	118791164	118767633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_19196.nnic	chr11	+	958	2	Antisense	novelGene_ENSG00000110367.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATTGTGCAAGTCAAG	118719852	False	NA	3	True	AATAAA	-14	NA	118719868	118754936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_+_118720348_118754457
transcript_19197.nnic	chr11	-	1349	2	NNC	ENSG00000287238.1	novel	1286	2	NA	NA	8250	4030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-118721145	False	NA	-5	True	ATTAAA	-17	NA	118721162	118717073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118717453_118720192
transcript_19198.known	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	-118729395	False	NA	NA	False	NA	NA	NA	118729412	118721103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118722076_118729098
transcript_19199.known	chr11	-	738	2	FSM	ENSG00000110367.14	ENST00000533239.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTTGTATAAATGGTT	-118765860	True	NA	NA	False	NA	NA	NA	118791149	118785832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118786519_118791097
transcript_192.known	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2387	junction_3	9022.52467352542	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_19209.known	chr11	+	1254	11	FSM	ENSG00000186166.9	ENST00000334418.6	1254	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	64.0440473424346	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTATCTACCTCCTAC	118994484	True	NA	69	True	ATTAAA	-18	NA	118998137	119015793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
transcript_1921.known	chr1	-	1312	12	FSM	ENSG00000158062.21	ENST00000374223.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	41.2244411175524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305436	True	NA	NA	False	AATAAA	-17	NA	26306620	26282281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_19216.known	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_3	7562.95641184716	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-119018657	False	NA	-10	True	AATAAA	-17	NA	119018678	119015711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
transcript_19218.known	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	7760.36555195694	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-118985601	True	NA	-10	True	AATAAA	-17	NA	119018330	119015711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
transcript_19219.known	chr11	-	483	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	4495.84980843444	4469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGAGTATGTCT	-118985614	True	NA	-15	True	AATAAA	-12	NA	119018343	119015716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
transcript_19223.known	chr11	-	1462	3	FSM	ENSG00000118181.11	ENST00000527853.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	6346.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAAATCAAATGAATG	-119016788	True	NA	-24	True	AATAAA	-3	NA	119018691	119015725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361
transcript_19227.known	chr11	-	2102	10	FSM	ENSG00000137700.18	ENST00000330775.9	2102	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	120.174358925729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	119030906	119024350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030848
transcript_19233.known	chr11	-	2040	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	89.9277487764483	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAGAAGATTAAAACTA	-119027109	True	NA	-34	True	AAGAAA	-10	NA	119030880	119024387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
transcript_19239.known	chr11	+	583	5	FSM	ENSG00000196655.12	ENST00000528230.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	349.15997408065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGAGAGTTCCTGCA	119014241	True	NA	NA	False	NA	NA	NA	119018765	119023421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019189_119020149_119020254_119021759_119021887_119023320
transcript_19240.known	chr11	+	1425	5	FSM	ENSG00000196655.12	ENST00000533632.6	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_2	58.489315263559	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCCACAACCCAATAGCT	119014241	True	NA	NA	False	AGTAAA	-39	NA	119018765	119024134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021759_119021887_119023320
transcript_19241.known	chr11	+	768	5	FSM	ENSG00000196655.12	ENST00000525079.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	350.448284344495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGCTGAACCTGTTATG	119014265	True	NA	NA	False	NA	NA	NA	119018789	119023394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019425_119020149_119020254_119021759_119021887_119023320
transcript_19246.known	chr11	+	817	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	386.855126486504	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	119014270	True	NA	17	True	AATAAA	-12	NA	119018794	119023659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
transcript_19249.known	chr11	+	654	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	119014241	True	NA	0	True	CATAAA	-7	NA	119018765	119023642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119021759_119021887_119023320
transcript_19250.known	chr11	-	4598	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_25	142.060347739966	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-119030863	True	NA	-5	True	AATAAA	-16	NA	119057205	119044187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_19253.known	chr11	+	3181	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5416652518392	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	119066919	True	NA	19	True	AATAAA	-20	NA	119067817	119081972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
transcript_19254.nnic	chr11	+	1453	15	NNC	ENSG00000256269.11	novel	1505	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	170.114967127576	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTGCGCGTGTGGA	119081894	True	NA	19	True	AATAAA	-15	NA	119084858	119093547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109_119093274_119093345
transcript_19255.known	chr11	+	1505	14	FSM	ENSG00000256269.11	ENST00000652429.1	1505	14	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_1	59.5338897071965	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCGCGTGTGGAGT	119081916	True	NA	21	True	AATAAA	-17	NA	119084880	119093549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19257.known	chr11	+	1180	14	FSM	ENSG00000256269.11	ENST00000648026.1	1180	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	234.317490577491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAGTCCAAGCAACAG	119082075	False	NA	-45	True	GGGGCT	-10	NA	119085039	119093483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091860_119091875_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19258.known	chr11	+	1448	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	174.992138454018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	119081918	True	NA	-16	True	GGGGCT	-39	NA	119084882	119093512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19261.known	chr11	+	1559	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	175.09665969597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	119081920	True	NA	-12	True	GGGGCT	-43	NA	119084884	119093516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19262.known	chr11	+	1351	13	FSM	ENSG00000256269.11	ENST00000544387.5	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	178.158227894944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	119081949	True	NA	20	True	AATAAA	-16	NA	119084913	119093548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_19273.known	chr11	+	1347	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	245.702467385533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	119081965	True	NA	5	True	AATAAA	-1	NA	119084929	119093533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19277.nic	chr11	+	991	9	ISM	ENSG00000256269.11	ENST00000652429.1	1505	14	-22	1819	-7	89	5prime_fragment	FALSE	canonical	3	550	junction_1	59.7483001850262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTGGTGTCAGATGAT	119081894	True	NA	6	True	NA	NA	NA	119084858	119091730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412
transcript_19281.known	chr11	-	1614	1	FSM	ENSG00000188486.4	ENST00000530167.2	1592	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAGTTGTAGAATT	-119082330	True	NA	-3	True	ATTAAA	-40	NA	119095467	119093853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119093900_119095500
transcript_19284.known	chr11	-	1760	9	FSM	ENSG00000172269.20	ENST00000682811.1	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	146.445755742527	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096463	True	NA	-24	True	AATAAA	-5	NA	119101831	119096522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_19286.known	chr11	-	1719	9	FSM	ENSG00000172269.20	ENST00000639704.1	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	151.629018907991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAAGTGTTCTGAT	-119096469	True	NA	-96	True	NA	NA	NA	119101837	119096594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100751_119101017_119101139_119101494
transcript_19290.nnic	chr11	-	1641	9	NNC	ENSG00000172269.20	novel	1913	9	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	145.831880945149	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119101399	False	5368	-11	True	AATAAA	-18	NA	119101410	119096509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101323
transcript_19291.known	chr11	-	1913	9	FSM	ENSG00000172269.20	ENST00000354202.9	1913	9	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_8	46.8853321946214	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119096485	True	NA	-11	True	AATAAA	-18	NA	119101853	119096509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_19298.known	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	160.141773922678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119096510	True	NA	-11	True	AATAAA	-18	NA	119101878	119096509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_19301.known	chr11	-	1689	8	FSM	ENSG00000172269.20	ENST00000682946.1	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	152.442829698647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096463	True	NA	-24	True	AATAAA	-5	NA	119101831	119096522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_1931.known	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_1	71	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	26270876	True	NA	29	True	ATTAAA	-22	NA	26280085	26281522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26280204_26280764_26280933_26281057
transcript_19314.known	chr11	-	1788	9	FSM	ENSG00000172269.20	ENST00000683143.1	1788	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	151.950187150263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096464	True	NA	-24	True	AATAAA	-5	NA	119101832	119096522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101048_119101494
transcript_19318.nnic	chr11	+	2280	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	58.2945108908206	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	119118576	True	NA	28	True	AATAAA	-19	NA	119121596	119135054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_119121640_119123567_119123685_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_1932.known	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	26270912	True	NA	-43	True	NA	NA	NA	26280121	26281450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26280204_26280764
transcript_19323.known	chr11	+	3185	10	FSM	ENSG00000172273.13	ENST00000350777.7	3185	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	23.0929415756695	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTCTATTTGTGG	119118559	True	NA	NA	False	AATAAA	-28	NA	119121579	119136059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_1933.known	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	26317752	True	NA	7	True	AATAAA	-19	NA	26317957	26320523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26318072_26320170
transcript_19332.nic	chr11	+	1989	9	NIC	ENSG00000172273.13	novel	3185	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	52.3197799593997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	119118559	True	NA	28	True	AATAAA	-19	NA	119121579	119135054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_119121640_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_19335.known	chr11	-	1173	8	FSM	ENSG00000248712.8	ENST00000415318.2	1173	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	7.74069553379661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCTGTGGGCTCTGG	NA	False	NA	-35	True	AATAAA	-20	NA	119196769	119190255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119190453_119190709_119190841_119193150_119193244_119193765_119193886_119194922_119194995_119195423_119195500_119195798_119196001_119196487
transcript_19338.known	chr11	-	1701	7	FSM	ENSG00000248712.8	ENST00000375140.7	1701	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.71902411793961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGCTCTGGCCGTTT	NA	False	NA	-29	True	AATAAA	-26	NA	119196769	119190249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119190453_119190709_119190841_119193150_119193886_119194922_119194995_119195423_119195500_119195798_119196001_119196487
transcript_19341.known	chr11	-	3327	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	5.11033810579648	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACATTGCTTTTTATTC	-119316224	True	NA	-4	True	AATAAA	-19	NA	119317130	119308528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_19342.known	chr11	+	2783	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	119324405	True	NA	14	True	AATAAA	-17	NA	119334526	119337309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119334500_119337300
transcript_19345.known	chr11	+	555	3	FSM	ENSG00000245248.8	ENST00000656105.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATGTCTCATACTTC	119381462	True	NA	3	True	TTTAAA	-7	NA	119381809	119409765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119381909_119394980_119395155_119409483
transcript_19346.known	chr11	+	1012	4	FSM	ENSG00000245248.8	ENST00000656292.1	1012	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1730755689881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTGGATCAGGGATT	119381459	True	NA	NA	False	AATAAA	-13	NA	119381806	119413108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119381909_119394980_119395155_119410677_119410776_119412470
transcript_19349.known	chr11	-	578	4	FSM	ENSG00000154096.14	ENST00000580275.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_2	1113.93636363224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCAGTGCAGAGATCC	-119366181	True	NA	NA	False	NA	NA	NA	119423198	119419374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419521_119420050_119420336_119420868_119420930_119423112
transcript_19350.known	chr11	-	897	4	FSM	ENSG00000154096.14	ENST00000528295.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1117.70598399877	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTGGGATGGTGGGGTA	-119366155	True	NA	NA	False	NA	NA	NA	119423172	119419072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419521_119420050_119420379_119420868_119420930_119423112
transcript_19351.known	chr11	-	602	4	FSM	ENSG00000154096.14	ENST00000532974.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1130.89974012828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCCTGCTCTCCCT	-119366182	True	NA	NA	False	NA	NA	NA	119423199	119419464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419521_119420050_119420449_119420868_119420930_119423112
transcript_1936.nic	chr1	-	1164	8	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17647	0	-100	0	3prime_fragment	FALSE	canonical	3	53	junction_6	16.7539212589477	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	-26336037	True	NA	-8	True	NA	NA	NA	26336483	26321864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
transcript_19365.known	chr11	+	523	4	FSM	ENSG00000254854.1	ENST00000533253.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTAGTGGGAGCCTCC	119729476	True	NA	NA	False	NA	NA	NA	119729582	119739623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119729807_119733656_119733751_119736806_119736919_119739530
transcript_19370.nic	chr11	+	572	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-1	-184	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	10.2089285540757	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	120324212	True	NA	5	True	AATAAA	-13	NA	120325297	120330634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_120325369_120327440_120327641_120329976_120330050_120330406
transcript_19371.known	chr11	+	3930	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.4742552876052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	120324221	True	NA	NA	False	AGTAAA	-16	NA	120325306	120333682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
transcript_19375.known	chr11	+	3980	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTCTTTATATTTAT	120324213	True	NA	NA	False	AGTAAA	-20	NA	120325298	120333686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120327440_120327641_120329976
transcript_19376.known	chr11	+	1434	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATGTTCAGGCAGTT	120324210	True	NA	NA	False	NA	NA	NA	120325295	120330818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120327121_120327641_120329976
transcript_19379.known	chr11	+	3776	2	FSM	ENSG00000181264.9	ENST00000531346.1	3776	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	120324210	True	NA	NA	False	AGTAAA	-13	NA	120325295	120333679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120329976
transcript_19380.nnic	chr11	-	935	3	Antisense	novelGene_ENSG00000109927.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGTACTTTCTTCA	-121198597	True	NA	-10	True	AATAAA	-18	NA	121198695	121187473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_-_121187985_121193670_121193929_121198529
transcript_19383.known	chr11	+	6854	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	94.2745326161843	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	121292492	False	NA	20	True	AATAAA	-25	NA	121292770	121313410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_19386.known	chr11	+	2258	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	292.566659071057	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCAGTTGAGTATTAT	121289797	False	NA	NA	False	AATAAA	-18	NA	121292851	121308633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_19390.known	chr11	+	6865	14	FSM	ENSG00000154127.10	ENST00000284273.6	6865	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.46965810296344	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGCAATGTCATTTTA	122655095	True	NA	NA	False	AATAAA	-19	NA	122655721	122814473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_122656211_122776218_122776273_122777023_122777211_122779496_122779696_122783052_122783223_122789099_122789309_122794701_122794835_122796155_122796277_122796910_122797034_122798941_122799035_122801187_122801333_122806409_122806517_122808066_122808177_122809748
transcript_19391.known	chr11	-	5032	7	FSM	ENSG00000166250.12	ENST00000448775.4	5032	7	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_5	3.13138237134266	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTAGGAGAAGCTGAAG	-123194162	True	NA	-27	True	AATAAA	-14	NA	123195248	123069871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123073775_123074701_123074844_123083084_123083208_123083679_123083848_123084511_123084714_123097794_123097953_123194912
transcript_1940.nnic	chr1	-	1054	7	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_6	18.8738502225228	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	-26336040	True	NA	-8	True	NA	NA	NA	26336486	26321864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336337
transcript_19443.known	chr11	-	2264	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	1844.61188329686	8185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123007290	True	NA	NA	False	AATAAA	-26	NA	123062136	123057488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_19453.known	chr11	-	2004	8	FSM	ENSG00000109971.14	ENST00000453788.6	2004	8	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	2734.02110975234	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123062324	False	NA	NA	False	AATAAA	-26	NA	123062335	123057488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057829_123058766_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_19489.known	chr11	-	2186	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	1931.47485151653	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	-123061321	False	NA	NA	False	AATAAA	-18	NA	123061332	123057496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
transcript_19491.known	chr11	-	3384	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	46.5259784063341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-123737801	True	NA	-1	True	AGTAAA	-14	NA	123741671	123724779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
transcript_19492.nnic	chr11	-	765	5	NIC	ENSG00000166261.11	novel	640	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	42.7280645477887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATTGGCATTGACTA	-123737810	True	NA	-16	True	ATTAAA	-17	NA	123741680	123738623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_123738911_123739433_123739544_123740116_123740233_123740416_123740537_123741548
transcript_19504.known	chr11	+	3419	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	44.2911880915443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	124113102	True	NA	NA	False	ATTAAA	-27	NA	124115403	124146909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_19507.known	chr11	+	1978	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	58.1498925192472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113102	True	NA	18	True	AATAAA	-20	NA	124115403	124124841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_19508.known	chr11	+	1863	10	FSM	ENSG00000110002.16	ENST00000361352.9	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	29.3917767957277	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113102	True	NA	18	True	AATAAA	-20	NA	124115403	124124841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_19512.known	chr11	+	5144	9	FSM	ENSG00000154144.13	ENST00000441174.8	5144	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	44.1580966528223	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATCATCTGCATTT	124620260	True	NA	NA	False	AATAAA	-23	NA	124622863	124635926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124626610_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_19516.known	chr11	+	1634	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	59.2607520598066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	NA	False	NA	8	True	AATAAA	-11	NA	124622835	124632434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_19517.known	chr11	+	4468	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	41.6065144035922	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	124620271	True	NA	21	True	AATAAA	-22	NA	124622874	124635398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_19519.known	chr11	+	3604	5	FSM	ENSG00000064199.7	ENST00000227135.7	3604	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.83298021964857	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACTTCCACTGACATC	124673361	True	NA	NA	False	NA	NA	NA	124673903	124697518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124673953_124675237_124675419_124681388_124681460_124691695_124691783_124694302
transcript_1952.nnic	chr1	+	1276	5	NNC	ENSG00000131914.11	novel	3458	5	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	692.718016223052	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273853	True	NA	76	True	AATAAA	-18	NA	26410816	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26426408_26429095
transcript_19525.known	chr11	-	1163	7	FSM	ENSG00000019102.12	ENST00000326621.10	1163	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.59861050777091	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCTCCTTCTTCTTTC	-124752222	True	NA	-5	True	ATTAAA	-15	NA	124752255	124747473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124747668_124748389_124748535_124748643_124748764_124749707_124749867_124750713_124750922_124751422_124751581_124752076
transcript_19527.known	chr11	-	1829	7	FSM	ENSG00000149564.12	ENST00000278927.10	1829	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTGCCTTTTCAAACTA	-124762254	True	NA	NA	False	AATAAA	-30	NA	124762290	124753125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124753962_124754213_124754341_124754640_124754764_124756206_124756363_124756540_124756743_124758348_124758528_124762084
transcript_19528.nic	chr11	+	1705	12	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	39.6655438876215	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124875962	True	NA	14	True	AATAAA	-16	NA	124876825	124881466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_19529.nic	chr11	+	1510	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	38.0958002934707	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124875962	True	NA	14	True	AATAAA	-16	NA	124876825	124881466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_19531.nic	chr11	+	1681	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	36.3594554414667	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124875962	True	NA	14	True	AATAAA	-16	NA	124876825	124881466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_124876933_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_19539.known	chr11	-	2052	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGCCTAGTTATAA	-124953735	True	NA	NA	False	AATAAA	-4	NA	124953966	124949204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124950560_124951338_124951551_124953481
transcript_19542.known	chr11	-	848	7	FSM	ENSG00000150433.10	ENST00000529583.5	848	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	40.7079708274545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCATCACTAAGACAAAT	-125110337	True	NA	NA	False	NA	NA	NA	125111604	125097485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110490_125110550_125110643_125110747_125111538
transcript_19545.known	chr11	-	1103	6	FSM	ENSG00000150433.10	ENST00000532407.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	43.9017083950044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	-125110312	True	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125110643_125110747_125111538
transcript_1955.nnic	chr1	+	2126	5	NNC	ENSG00000131914.11	novel	3458	5	NA	NA	-60	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	692.718016223052	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26427236_26429133
transcript_19551.known	chr11	-	954	5	FSM	ENSG00000150433.10	ENST00000532156.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	42.6204176422522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGATAATATATAAAATTA	-125110312	True	NA	NA	False	AAAAAG	-21	NA	125111579	125097242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101257_125102131_125102318_125102636_125102810_125111538
transcript_19556.known	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	30.8625987240219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	-125110441	True	NA	NA	False	NA	NA	NA	125111708	125096544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
transcript_19557.nic	chr11	-	1329	5	NIC	ENSG00000150433.10	novel	1828	5	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	38.1010170467929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110478	True	NA	-21	True	AATAAA	-17	NA	125111745	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111584
transcript_19558.nic	chr11	-	1328	5	NIC	ENSG00000150433.10	novel	1828	5	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	39.4112927978771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110479	True	NA	-21	True	AATAAA	-17	NA	125111746	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111586
transcript_19559.known	chr11	-	3805	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	28.9179874818425	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGTATGAATAACAAAC	-125110359	True	NA	NA	False	ATTAAA	-16	NA	125111626	125094388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
transcript_19561.nic	chr11	-	1232	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	37.043049280533	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110478	True	NA	-21	True	AATAAA	-17	NA	125111745	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111584
transcript_19562.nic	chr11	-	1231	5	NIC	ENSG00000150433.10	novel	706	6	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	38.4382621875651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110479	True	NA	-21	True	AATAAA	-17	NA	125111746	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111586
transcript_19564.known	chr11	-	1034	5	FSM	ENSG00000150433.10	ENST00000279968.8	1034	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	37.1786228900426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	-125110312	True	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102352_125102636_125102810_125111538
transcript_19567.nic	chr11	-	1183	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	35.7246413557925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110349	True	NA	-21	True	AATAAA	-17	NA	125111616	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102352_125102733_125102810_125111538
transcript_19579.nnic	chr11	-	1049	4	NIC	ENSG00000150433.10	novel	1828	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	47.1616605117146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110338	True	NA	-21	True	AATAAA	-17	NA	125111605	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102636_125102810_125111538
transcript_19583.known	chr11	-	857	4	FSM	ENSG00000150433.10	ENST00000531262.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	42.4996732013579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGTTGGTCATTG	-125110350	True	NA	-128	True	NA	NA	NA	125111617	125097141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125111538
transcript_19589.nnic	chr11	-	988	3	NIC	ENSG00000150433.10	novel	4547	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	58.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111763	125097034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125111584
transcript_19590.nic	chr11	-	1729	10	NIC	ENSG00000149557.14	novel	4583	10	NA	NA	115	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	71.6701980180787	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGTGCTTTGG	-125492505	False	3045	-9	True	AATAAA	-16	NA	125495550	125445752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125495387
transcript_19592.known	chr11	-	4583	10	FSM	ENSG00000149557.14	ENST00000278919.8	4583	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	53.641010660607	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTTACT	-125493220	True	NA	NA	False	AATACA	-27	NA	125496265	125442880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
transcript_19596.known	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-125493232	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125489823_125496120
transcript_19597.known	chr11	-	569	2	FSM	ENSG00000149557.14	ENST00000527534.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGAGAACCTAGCTCC	-125493077	False	NA	NA	False	AATGAA	-43	NA	125496122	125489540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125489823_125495835
transcript_19598.known	chr11	-	750	2	FSM	ENSG00000149557.14	ENST00000524435.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCGGAGCAGTGCCC	-125492620	False	NA	NA	False	NA	NA	NA	125495665	125489350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125489823_125495387
transcript_1960.nnic	chr1	+	2392	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	692.718016223052	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273853	True	NA	76	True	AATAAA	-18	NA	26410816	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26427413_26428984
transcript_19603.nic	chr11	+	2263	12	NIC	ENSG00000149547.15	novel	2191	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	500.771058361565	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	125554733	True	NA	17	True	ATTAAA	-22	NA	125569491	125584684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_125569574_125570103_125570191_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19605.known	chr11	+	1747	11	FSM	ENSG00000149547.15	ENST00000618552.4	1747	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	409.934250825666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTCTTGCTCCACTGC	125554699	True	NA	NA	False	NA	NA	NA	125569457	125584209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575250_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19608.known	chr11	+	2191	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_9	95.5403579645796	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	125554718	True	NA	17	True	ATTAAA	-22	NA	125569476	125584684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_1961.nnic	chr1	+	3382	5	NNC	ENSG00000131914.11	novel	3458	5	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	692.718016223052	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428496_26429137
transcript_19610.known	chr11	+	1625	10	FSM	ENSG00000149547.15	ENST00000527235.6	1625	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	433.536391170494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	125554730	True	NA	NA	False	NA	NA	NA	125569488	125584242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125582345_125582421_125583520
transcript_19612.nnic	chr11	+	1635	10	NIC	ENSG00000149547.15	novel	2191	11	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_6	415.11081370439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	125554712	True	NA	NA	False	NA	NA	NA	125569470	125584242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19613.known	chr11	+	1407	10	FSM	ENSG00000149547.15	ENST00000615917.4	1407	10	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_2	432.27488967891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTGGATGAATGGA	125554699	True	NA	NA	False	NA	NA	NA	125569457	125584027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19616.known	chr11	+	1718	11	FSM	ENSG00000149547.15	ENST00000620753.4	1718	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	417.45447656002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCTGAAGA	125554699	True	NA	NA	False	NA	NA	NA	125569457	125584251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569515_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19620.known	chr11	+	2402	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	376.734687401304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	125564615	True	NA	24	True	NA	NA	NA	125592835	125620888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_19623.known	chr11	+	4173	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	371.674887801452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	125564637	True	NA	-32	True	AATGAA	-11	NA	125592857	125622721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_19627.known	chr11	+	4501	18	FSM	ENSG00000134910.14	ENST00000392708.9	4501	18	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_9	104.121269461745	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGGGACCCAAAAAAGC	125564631	True	NA	NA	False	NA	NA	NA	125592851	125623091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_1963.nnic	chr1	+	3403	5	NNC	ENSG00000131914.11	novel	3458	5	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	692.718016223052	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428517_26429137
transcript_19636.known	chr11	+	2160	17	FSM	ENSG00000134910.14	ENST00000531491.5	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	292.602165651162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	125564646	True	NA	24	True	NA	NA	NA	125592866	125620888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_1964.nnic	chr1	+	3466	5	NNC	ENSG00000131914.11	novel	3458	5	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	692.718016223052	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428575_26429132
transcript_19644.nic	chr11	+	2038	15	NIC	ENSG00000149554.14	novel	1845	14	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_14	80.1589301427648	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	125625876	False	NA	21	True	AATAAA	-16	NA	125625910	125676255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125656205_125656336_125675927
transcript_19649.known	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	82.1032687873152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	125620755	True	NA	21	True	AATAAA	-16	NA	125625973	125676255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
transcript_1965.nnic	chr1	+	3463	5	NNC	ENSG00000131914.11	novel	3458	5	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_4	605.958074044731	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428577_26429137
transcript_1966.known	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	692.718016223052	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	26273853	True	NA	78	True	AATAAA	-20	NA	26410816	26429719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
transcript_19660.known	chr11	+	4128	13	FSM	ENSG00000149554.14	ENST00000438015.7	4128	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	48.6743002004138	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	NA	False	NA	23	True	AATAAA	-25	NA	125625162	125657147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_19667.known	chr11	+	3390	13	FSM	ENSG00000149554.14	ENST00000532449.6	3390	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.498947804738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAATTTGTATAGAAT	125621010	False	NA	NA	False	NA	NA	NA	125626228	125656845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_1967.nnic	chr1	+	3514	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	691.854392195352	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428599_26429108
transcript_19670.known	chr11	+	3513	13	FSM	ENSG00000149554.14	ENST00000534070.5	3513	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	78.5687950496605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	125626280	True	NA	23	True	AATAAA	-25	NA	125626340	125657147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_19675.known	chr11	+	1653	12	FSM	ENSG00000149554.14	ENST00000544373.5	1653	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	87.5080161617322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAGATGAACCAATAAAG	125620758	True	NA	-31	True	AAAAAG	-24	NA	125625976	125655710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626013_125626748_125626834_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_19689.known	chr11	+	668	7	FSM	ENSG00000149554.14	ENST00000527013.6	668	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.911615068382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACCAACCCAGTGACA	125620783	True	NA	NA	False	TTTAAA	-34	NA	125626001	125635435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626030_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428
transcript_1969.nnic	chr1	+	996	4	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	768.937072992467	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273853	True	NA	76	True	AATAAA	-18	NA	26410816	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425339_26429060
transcript_19693.known	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	25.8499946271217	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-125901555	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
transcript_19694.nnic	chr11	-	1405	4	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.6931365951495	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-125901577	True	NA	-4	True	ATTAAA	-18	NA	125903228	125893484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
transcript_19697.nnic	chr11	-	2125	4	Fusion	ENSG00000255027.2_ENSG00000110060.9	novel	1829	4	NA	NA	-958	-230	multi-exon	FALSE	canonical	3	12	junction_1	35.6931365951495	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTGCAAGTACTAGGA	-125904142	False	NA	NA	False	NA	NA	NA	125904179	125893715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
transcript_19698.known	chr11	+	1451	3	FSM	ENSG00000198331.11	ENST00000425380.7	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	125886757	True	NA	10	True	ATTAAA	-17	NA	125887667	125900646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125887766_125891422_125891473_125899343
transcript_19699.known	chr11	-	1419	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	42.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTGTTGTGTTTTT	-125901570	True	NA	-5	True	ATTAAA	-17	NA	125903221	125893485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125894287_125895223_125895790_125903169
transcript_1970.nnic	chr1	+	1055	4	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-60	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	768.937072992467	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273793	True	NA	76	True	AATAAA	-18	NA	26410756	26429717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26410923_26411385_26411583_26425302_26425351_26429073
transcript_19701.known	chr11	-	605	3	FSM	ENSG00000110060.9	ENST00000534158.5	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	25.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATCCGTATATTGGC	-125901570	True	NA	NA	False	NA	NA	NA	125903221	125895660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125895790_125895906_125896331_125903169
transcript_19706.known	chr11	+	1646	12	FSM	ENSG00000109832.14	ENST00000525943.1	1646	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	30.6588803146619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAAGATTATTTCTT	125903329	False	NA	-1	True	AATAAA	-2	NA	125903375	125923083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125903431_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_19707.known	chr11	+	7424	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	9.23521825396385	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTCTATCTCAGTCT	125903423	True	NA	17	True	AATAAA	-33	NA	125904507	125928843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_1971.known	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	1527	junction_3	59.4885609919158	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	26273853	True	NA	87	True	AATAAA	-29	NA	26410816	26429728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
transcript_19710.nic	chr11	+	1643	11	NIC	ENSG00000109832.14	novel	1646	12	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	32.0405992453325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAATCTTTGTACAGGTA	125903286	True	NA	20	True	AATAAA	-23	NA	125903332	125923104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_125903431_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_19716.known	chr11	-	1791	7	FSM	ENSG00000165526.9	ENST00000526942.5	1791	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.6431681574013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTTAGCTCCAGCT	-126208291	True	NA	NA	False	NA	NA	NA	126211629	126202781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209490_126209723_126210889_126211056_126211449
transcript_19717.known	chr11	-	2468	7	FSM	ENSG00000165526.9	ENST00000298317.9	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	19.6588967702214	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGATGACTATATTTGT	-126208312	True	NA	-3	True	AATAAA	-19	NA	126211650	126202095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
transcript_19729.known	chr11	-	1030	3	FSM	ENSG00000165526.9	ENST00000532800.1	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	-126208292	True	NA	NA	False	NA	NA	NA	126211630	126209039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126209723_126210889_126211056_126211449
transcript_19732.known	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	2	178	junction_10	60.3331971186362	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	-126260905	True	NA	-27	True	AATAAA	-14	NA	126268895	126262937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
transcript_19738.known	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	14.871449156017	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	126266131	True	NA	10	True	AATACA	-17	NA	126269153	126278126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_19741.known	chr11	+	1825	11	FSM	ENSG00000110074.12	ENST00000687699.1	1827	11	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_1	92.319282926158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATCCATCTGGAGGCC	126266186	True	NA	NA	False	NA	NA	NA	126269208	126277931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269416_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_19749.known	chr11	+	1760	10	FSM	ENSG00000110074.12	ENST00000527004.5	1760	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	129.599382714579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	126266167	True	NA	-47	True	NA	NA	NA	126269189	126278069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273338_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_1975.known	chr1	+	3245	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	55.3634299425171	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	26428061	True	NA	10	True	AATAGA	-15	NA	26432354	26471294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
transcript_19751.known	chr11	+	1427	10	FSM	ENSG00000110074.12	ENST00000525770.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	96.3605626005336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCACAGGCAGTGAG	126266148	True	NA	NA	False	NA	NA	NA	126269170	126277840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269292_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_19756.known	chr11	+	2016	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	58.7663541067506	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	126208702	True	NA	-16	True	TATAAA	-1	NA	126211781	126262968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19760.nic	chr11	+	1670	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	-1	-65	combination_of_known_junctions	TRUE	canonical	3	168	junction_7	92.5053207929144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGCTCTAGTTTTCTA	126208643	True	NA	12	True	TTTAAA	-7	NA	126211722	126262566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19761.nic	chr11	+	1735	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_7	92.5053207929144	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208643	True	NA	-11	True	NA	NA	NA	126211722	126262631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19762.nic	chr11	+	2025	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_7	92.5053207929144	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	126208643	True	NA	-2	True	TATAAA	-9	NA	126211722	126262921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19776.nic	chr11	+	1659	8	NIC	ENSG00000197798.9	novel	1616	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	139.143150483704	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208653	True	NA	-11	True	NA	NA	NA	126211732	126262631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19777.nic	chr11	+	1949	8	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	139.143150483704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	126208653	True	NA	-2	True	TATAAA	-9	NA	126211732	126262921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19779.known	chr11	+	1616	8	FSM	ENSG00000197798.9	ENST00000360194.8	1616	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	153.869809798241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208693	True	NA	-11	True	NA	NA	NA	126211772	126262631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_1978.nic	chr1	+	1204	9	NIC	ENSG00000117682.17	novel	3288	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	64.6601693471336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGTGTTCCCTTTGCT	26428070	True	NA	12	True	NA	NA	NA	26432363	26469226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_26432416_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_19789.known	chr11	+	5427	6	FSM	ENSG00000110063.10	ENST00000263579.5	5427	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	12.1885191881541	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTTGGTTTTTTTGC	126300388	True	NA	11	True	AATAAA	-24	NA	126304059	126350005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346
transcript_19793.known	chr11	-	416	2	FSM	ENSG00000255062.2	ENST00000524964.2	423	2	5	2	3	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTTTGAAGTGAATCG	-126303784	True	NA	-1	True	AATAAA	-38	NA	126304318	126294297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126294603_126304207
transcript_19794.known	chr11	-	1572	2	FSM	ENSG00000280832.2	ENST00000629441.2	1579	2	0	7	0	-7	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACAGGTGATCCTTT	-126355044	True	NA	NA	False	AATAAA	-15	NA	126355579	126340888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126342323_126355441
transcript_19797.known	chr11	-	5139	10	FSM	ENSG00000134954.14	ENST00000392668.8	5139	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	11.5705031528398	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	-128583489	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
transcript_1980.nic	chr1	+	1296	9	NIC	ENSG00000117682.17	novel	3288	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	57.6319139019346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGTGTTCCCTTTGCT	26428081	True	NA	12	True	NA	NA	NA	26432374	26469226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_19800.known	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	52.6645569197687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	-128583473	True	NA	NA	False	AATAAA	-15	NA	128587542	128536411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
transcript_19801.nnic	chr11	+	949	2	Antisense	novelGene_ENSG00000134954.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCTTTATTTCTTTGG	128582883	True	NA	NA	False	AATAAA	-20	NA	128583053	128587134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_+_128583208_128586339
transcript_19804.known	chr11	-	609	4	FSM	ENSG00000174370.12	ENST00000524878.2	3609	4	9	2991	9	-2991	multi-exon	FALSE	canonical	1	2	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTCCTTGCCAATAG	-128905965	True	NA	NA	False	NA	NA	NA	128906035	128902556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_128902714_128903366_128903512_128904430_128904612_128905909
transcript_19805.known	chr11	+	2205	6	FSM	ENSG00000151715.8	ENST00000281441.8	2205	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.5298221281347	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGGAGAGGAGGGGA	129815816	True	NA	NA	False	NA	NA	NA	129815847	129860003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_129815899_129852474_129852661_129854609_129854817_129855707_129855893_129857312_129857459_129858573
transcript_19810.nic	chr11	-	1226	11	NIC	ENSG00000170322.15	novel	4114	27	NA	NA	-2	2156	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	51.4688255160345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-129892379	True	NA	-2	True	AAAAAG	-13	NA	129895586	129882587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
transcript_19811.known	chr11	-	5173	27	FSM	ENSG00000170322.15	ENST00000682444.1	5173	27	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_25	28.4252367244362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129892371	True	NA	-4	True	AGTAAA	-18	NA	129895578	129863635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_19820.nic	chr11	-	1970	4	ISM	ENSG00000170325.16	ENST00000531431.1	528	5	-249	6211	-199	-6211	5prime_fragment	FALSE	canonical	3	22	junction_3	4.54606056566195	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATTAAATTAAAAT	-130002948	True	NA	NA	False	NA	NA	NA	130003034	129954266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_129955572_129957745_129957911_129960895_129961083_130002721
transcript_19821.known	chr11	+	3727	18	FSM	ENSG00000084234.18	ENST00000263574.9	3727	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_14	703.158593007591	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCGTTTCACTGACTGC	130029741	True	NA	32	True	AATAAA	-21	NA	130069905	130144811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_19824.known	chr11	+	3697	17	FSM	ENSG00000084234.18	ENST00000338167.10	3697	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_7	497.655880101903	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	130029729	True	NA	26	True	AATAAA	-15	NA	130069893	130144805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_19827.nic	chr11	+	2589	17	NIC	ENSG00000084234.18	novel	3727	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	304	junction_13	620.121633104143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	130029706	True	NA	17	True	AATAAA	-28	NA	130069870	130143806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_19829.known	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_6	257.563368686017	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	130029729	True	NA	17	True	AATAAA	-28	NA	130069893	130143806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_1983.known	chr1	+	1235	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	62.9940068415971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	26428045	True	NA	2	True	ACTAAA	-18	NA	26432338	26469373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
transcript_19836.nic	chr11	+	776	5	ISM	ENSG00000084234.18	ENST00000528499.5	2530	16	-23	22040	-20	0	5prime_fragment	FALSE	canonical	3	1754	junction_3	208.347516183899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGGAAGATGAAGA	130029706	True	NA	NA	False	NA	NA	NA	130069870	130121766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613
transcript_19843.nnic	chr11	+	1044	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	27	-13	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGCACACTATTTACAG	131250193	True	NA	13	True	AGTAAA	-27	NA	131253386	131301110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_19847.nnic	chr11	+	1106	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	-36	-19	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	1.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATGGATGCACACTAT	131250216	True	NA	7	True	AGTAAA	-21	NA	131253409	131301104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_131253592_131254341_131254519_131300357
transcript_19851.known	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	135	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	131250228	True	NA	10	True	NA	NA	NA	131253421	131300771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_131253592_131300357
transcript_19854.nnic	chr11	-	309	2	Antisense	novelGene_ENSG00000182667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATTTATTTAAACTTA	NA	False	NA	2	True	AATAAA	-19	NA	131911622	131903392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_-_131903579_131911499
transcript_19856.nnic	chr11	+	1114	3	Antisense	novelGene_ENSG00000279189.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTCTGACTGTGAGA	133302290	True	NA	NA	False	AATAAA	-15	NA	133302332	133305456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_+_133302385_133304083_133304153_133304463
transcript_19859.known	chr11	+	3765	9	FSM	ENSG00000166086.13	ENST00000299106.9	3765	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	17.8518206354422	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAACGCACATCATCA	134068049	True	NA	NA	False	NA	NA	NA	134069071	134152001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144240_134144394_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_1986.known	chr1	+	868	7	FSM	ENSG00000117682.17	ENST00000427245.6	868	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	78.0101489123904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTCCCTCTCATGTT	26428022	True	NA	-86	True	ATTAAA	-29	NA	26432315	26448565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26448355
transcript_19861.nic	chr11	-	538	4	ISM	ENSG00000151503.14	ENST00000687155.1	4954	31	-2	53153	-2	-1216	5prime_fragment	FALSE	canonical	3	217	junction_2	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAGAAAGAACAGC	-134219868	True	NA	2	True	NA	NA	NA	134223988	134210360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_134210455_134216935_134217099_134220571_134220727_134223862
transcript_19862.nic	chr11	-	781	3	NIC	ENSG00000151503.14	novel	1060	2	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	6	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCATTCTCTCCAGTTT	-134224397	True	NA	-15	True	AATAAA	-30	NA	134224539	134223092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_134223483_134223862_134224001_134224286
transcript_19871.known	chr11	-	893	8	FSM	ENSG00000151500.15	ENST00000392595.6	893	8	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	254.493173798835	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238753	False	NA	-18	True	AATAAA	-18	NA	134253248	134248278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_19872.known	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_7	510.554160712072	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238875	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_19877.known	chr11	-	1304	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	248.124296808407	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTTCTTCTAAAACCA	-134238857	True	NA	-21	True	AATAAA	-15	NA	134253352	134248281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_19886.known	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	502.289314594244	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238855	True	NA	23	True	AATAAA	-9	NA	134253350	134248287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_19887.nic	chr11	-	806	7	NIC	ENSG00000151500.15	novel	835	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	277	junction_6	668.535380930251	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238898	False	NA	23	True	AATAAA	-9	NA	134253393	134248287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_19889.known	chr11	-	926	6	FSM	ENSG00000151500.15	ENST00000531135.5	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_5	203.72236008843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGTGGCCCCTTAAA	-134238858	True	NA	NA	False	NA	NA	NA	134253353	134248881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_19892.nic	chr11	-	1161	6	ISM	ENSG00000151500.15	ENST00000352327.5	835	7	-16	0	4	0	intron_retention	FALSE	canonical	3	401	junction_1	543.328777077011	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238871	True	NA	23	True	AATAAA	-9	NA	134253366	134248287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_19898.nic	chr11	+	1625	11	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-38	150	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	133.070244607876	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTGGTAGTCACAGAC	134249991	True	NA	13	True	AATAAA	-23	NA	134253509	134263108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_199.known	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	10205	junction_3	6778.77356916727	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
transcript_1990.known	chr1	+	516	4	FSM	ENSG00000117682.17	ENST00000528557.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	107.251521615728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAGAGCATGTTCTTCCA	26428077	True	NA	NA	False	AAGAAA	-18	NA	26432370	26442889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432493_26432890_26433009_26438167_26438285_26442730
transcript_19900.known	chr11	+	2176	11	FSM	ENSG00000151498.12	ENST00000281182.9	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_3	42.9745273388783	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134250049	True	NA	39	True	AATAAA	-28	NA	134253567	134265855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_19906.nic	chr11	+	2064	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	131.734113058121	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134249991	True	NA	39	True	AATAAA	-28	NA	134253509	134265855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_19909.known	chr11	+	1797	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	160.313086534711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	134250042	True	NA	34	True	AATAAA	-23	NA	134253560	134265850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_19910.nic	chr11	+	881	7	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	0	24	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	162.805610058949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGGGTATTTCAG	134250042	True	NA	10	True	AATAAA	-16	NA	134253560	134260164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134260028
transcript_19916.nnic	chr11	-	1755	2	Genic_Genomic	ENSG00000289399.1	novel	922	1	NA	NA	-68	3251	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCTTTACAGTTCAATA	-134276257	False	4127	-2	True	AATAAA	-22	NA	134276269	134272028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr11_-_134272699_134275184
transcript_19919.nnic	chr11	+	3115	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	27.0850716822614	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	134331512	True	NA	29	True	AGTAAA	-20	NA	134331983	134376324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375745_134375884
transcript_19922.known	chr11	+	864	3	FSM	ENSG00000255545.8	ENST00000657630.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGAGTGAAACGCGCA	134412187	True	NA	NA	False	ATTAAA	-16	NA	134412283	134439007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134412339_134436482_134436785_134438500
transcript_19934.known	chr12	-	1101	2	FSM	ENSG00000010379.16	ENST00000436453.1	1101	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGACGTTGATAACCAA	NA	False	NA	NA	False	AATAAA	-15	NA	262836	259004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_260058_262788
transcript_19938.known	chr12	+	2300	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	34.5265598247687	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398831	True	NA	15	True	AATAAA	-16	NA	401643	442642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_1994.known	chr1	+	1148	7	FSM	ENSG00000198830.11	ENST00000619352.4	1148	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3867.6033779188	7001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTT	26371367	True	NA	NA	False	AATAAA	-22	NA	26472514	26475970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26472563_26472607_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_19941.known	chr12	+	2338	12	FSM	ENSG00000120647.10	ENST00000422000.5	2338	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.570643788368	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTTCTTTGAGTTT	389245	True	NA	11	True	AATAAA	-12	NA	389349	442638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_389487_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_19944.known	chr12	+	2253	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	27.0860276261024	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398824	True	NA	15	True	AATAAA	-16	NA	401636	442642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_19945.nnic	chr12	+	2283	12	NIC	ENSG00000120647.10	novel	2300	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.7243400911826	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398794	True	NA	15	True	AATAAA	-16	NA	401606	442642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_401685_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_19946.known	chr12	+	1652	11	FSM	ENSG00000120647.10	ENST00000540180.5	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.3806642320656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTGACTAGAGT	389243	True	NA	NA	False	NA	NA	NA	389347	442004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_389487_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_19948.nnic	chr12	+	2229	11	NIC	ENSG00000120647.10	novel	2253	12	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	48.5835363060368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398794	True	NA	15	True	AATAAA	-16	NA	401606	442642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_401685_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_19956.known	chr12	-	670	4	FSM	ENSG00000171840.13	ENST00000542920.1	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCCTACCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	643665	564580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_564682_565216_565402_565949_566179_643510
transcript_19958.known	chr12	-	501	3	FSM	ENSG00000250132.6	ENST00000539259.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAACTGCTTGTAC	-991083	True	NA	-23	True	NA	NA	NA	991190	976978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_977107_989808_990042_991050
transcript_19962.known	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	23.5687160235767	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-2000712	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_19964.known	chr12	-	2231	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTTGTATTTTTT	-2000790	True	NA	NA	False	AATAAA	-18	NA	2004535	1991455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_1993392_1997934_1997976_2004281
transcript_19970.nnic	chr12	-	959	3	Fusion	ENSG00000246627.6_ENSG00000256271.1	novel	609	2	NA	NA	-12	0	intron_retention	FALSE	canonical	3	9	junction_2	1.5	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-2691037	True	NA	NA	False	ATTAAA	-20	NA	2691130	2668499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_2669017_2672128_2672247_2690806
transcript_19975.known	chr12	+	2320	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	18.9688740261034	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	2810900	True	NA	18	True	AATAAA	-24	NA	2812667	2825076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_19983.known	chr12	+	3080	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.7477270848675	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	2887371	True	NA	101	True	AATAAA	-19	NA	2890890	2941138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_19986.known	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1768	junction_3	72.1194140058224	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	2767575	True	NA	18	True	ATTAAA	-29	NA	2794969	2805423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
transcript_19993.known	chr12	+	1419	9	FSM	ENSG00000111203.13	ENST00000537851.5	1419	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	40.9687380816153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACAGAGACTTGTT	2810917	True	NA	NA	False	NA	NA	NA	2812684	2824502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_19998.known	chr12	+	587	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAATTGCTGCCCTCCT	2810993	True	NA	NA	False	AATAAA	-4	NA	2812760	2818458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
transcript_2.known	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00003_+_0_1000
transcript_20.known	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00053_+_0_1000
transcript_20002.known	chr12	+	1926	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	32.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGGACCTACTGTGT	2871401	True	NA	6	True	ATTAAA	-20	NA	2877222	2889524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2885282_2885535_2887910
transcript_20006.known	chr12	+	1605	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	2871386	True	NA	-9	True	NA	NA	NA	2877207	2889440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2887910
transcript_20010.known	chr12	-	442	2	FSM	ENSG00000258325.2	ENST00000547794.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGCAAGGATTCAG	-2812700	False	NA	-14	True	ATTAAA	-18	NA	2812816	2805130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_2805318_2812561
transcript_20011.known	chr12	+	1008	1	FSM	ENSG00000171792.11	ENST00000623153.1	1008	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTAATGGTCTTTGTTT	2887987	False	NA	11	True	AATACA	-15	NA	2888000	2889008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2888000_2889000
transcript_20012.known	chr12	+	1951	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	35.2968521060312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	2887387	True	NA	93	True	AATAAA	-11	NA	2890906	2941130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
transcript_20013.known	chr12	-	347	2	FSM	ENSG00000258325.2	ENST00000552469.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATGGTTGCAAGGATT	-2812265	False	NA	-17	True	ATTAAA	-15	NA	2812381	2805133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_2805318_2812218
transcript_20014.known	chr12	+	1710	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	41.047651847849	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGCTGTGTGAGC	2953886	True	NA	25	True	AATAAA	-28	NA	2959396	3040676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20017.known	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	92.1415547714628	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953819	True	NA	14	True	AATAAA	-17	NA	2959329	3040665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20021.nnic	chr12	+	1659	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	89.6765537781234	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953833	True	NA	14	True	AATAAA	-17	NA	2959343	3040665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20025.known	chr12	+	1396	11	FSM	ENSG00000197905.10	ENST00000397122.6	1396	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	94.8261567290376	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGTCTGGCTGTG	2959230	True	NA	20	True	AATAAA	-23	NA	2959916	3040671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20026.known	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5.1234753829798	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	3073724	True	NA	13	True	AATAAA	-23	NA	3077378	3286559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_20027.known	chr12	+	4284	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.3101002359368	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	3073700	True	NA	18	True	AATAAA	-28	NA	3077354	3286564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_20029.known	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	-3211907	False	NA	NA	False	NA	NA	NA	3211917	3211662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3211700_3211900
transcript_20030.nic	chr12	-	708	2	FSM	ENSG00000250770.4	ENST00000686448.1	680	2	-34	6	3	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTAGATTCTATTAGTTC	-3366047	True	NA	-1	True	AATAAA	-15	NA	3366146	3331772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3332393_3366058
transcript_20033.known	chr12	+	2399	10	FSM	ENSG00000111218.12	ENST00000382622.4	2399	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	2.55796987404919	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGGATGGCTGGTTCC	3491096	True	NA	NA	False	AATAAA	-17	NA	3491202	3593973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_3491701_3540605_3540792_3549935_3550092_3553650_3553715_3568705_3568849_3569476_3569565_3576870_3576987_3583057_3583209_3592230_3592353_3593098
transcript_20042.nic	chr12	-	1498	9	NIC	ENSG00000111224.14	novel	1197	9	NA	NA	4	156	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	17.5695048308141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTTTTGTTGTTTTG	-3872055	True	NA	NA	False	TATAAA	-19	NA	3873432	3811966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3863835_3863958_3873211
transcript_20044.known	chr12	-	4449	8	FSM	ENSG00000111224.14	ENST00000228820.9	4449	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	21.263171188221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3872022	True	NA	-22	True	ATTAAA	-18	NA	3873399	3808860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
transcript_20045.known	chr12	-	4406	8	FSM	ENSG00000111224.14	ENST00000427057.6	4406	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	19.5301964001536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3871978	True	NA	-22	True	ATTAAA	-18	NA	3873355	3808860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
transcript_20046.known	chr12	-	4299	7	FSM	ENSG00000111224.14	ENST00000458162.6	4299	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	23.7814119756493	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3871993	True	NA	-22	True	ATTAAA	-18	NA	3873370	3808860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3873211
transcript_20051.nnic	chr12	+	977	3	NNC	ENSG00000256969.2	novel	1003	5	NA	NA	-2090	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	6	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCACGCCTAGATTGT	4017665	True	NA	37	True	AATAAA	-18	NA	4018886	4026657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_4019140_4020793_4021082_4026221
transcript_20052.nic	chr12	+	791	3	ISM	ENSG00000256969.2	ENST00000654858.1	1003	5	5984	0	-2090	0	3prime_fragment	FALSE	canonical	2	12	junction_1	16	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCACGCCTAGATTGT	4017665	True	NA	37	True	AATAAA	-18	NA	4018886	4026657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4019140_4020979_4021082_4026221
transcript_20053.nic	chr12	+	859	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5816	0	-2259	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	NA	False	NA	38	True	AATAAA	-19	NA	4018717	4026658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4019140_4026221
transcript_20054.known	chr12	+	6532	6	FSM	ENSG00000118971.9	ENST00000675880.1	6532	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	503.21049273639	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	4259055	True	NA	13	True	AATAAA	-14	NA	4273761	4305350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4285274_4285317_4288841_4288991_4299859
transcript_20055.known	chr12	+	6493	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	47.7827113085894	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGGCCGTTTTTGACT	4259055	True	NA	16	True	AATAAA	-17	NA	4273761	4305353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_20057.nnic	chr12	+	1174	4	NIC	ENSG00000118971.9	novel	6493	5	NA	NA	35	2250	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	463.232123238447	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAGGGAATCCCTTGTA	4259090	True	NA	31	True	AATAAA	-28	NA	4273796	4300218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4274236_4276004_4276221_4278759_4278920_4299859
transcript_20058.known	chr12	-	1374	2	FSM	ENSG00000255920.4	ENST00000656828.1	1374	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACATATGTCCACAGT	-4275431	False	25	NA	False	NA	NA	NA	4275456	4247980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_4249194_4275295
transcript_20060.known	chr12	+	8209	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	12.0266371026983	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	4318341	True	NA	NA	False	ATTAAA	-19	NA	4321212	4360028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
transcript_20061.nnic	chr12	+	1310	5	NIC	ENSG00000078237.7	novel	8209	6	NA	NA	-31	820	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	105.869022853713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAACATGTTTTACG	4318310	True	NA	16	True	AATAAA	-30	NA	4321181	4353176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4321304_4331279_4331318_4337038_4337161_4351266_4351378_4352259
transcript_20062.known	chr12	-	3002	3	FSM	ENSG00000118972.3	ENST00000237837.2	3002	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTAACCCTAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	4379712	4368226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_4370784_4372593_4372698_4379371
transcript_20063.known	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	20.0056205120213	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-4537574	True	NA	-63	True	ATTAAA	-14	NA	4538508	4489414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
transcript_2007.known	chr1	+	1940	6	FSM	ENSG00000198830.11	ENST00000361427.6	1940	6	0	0	0	0	multi-exon	FALSE	canonical	3	9773	junction_2	355.842886678939	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTCCATTCCCTTA	26371292	True	NA	6	True	AATAAA	-17	NA	26472439	26476642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_20070.known	chr12	+	2235	11	FSM	ENSG00000111247.15	ENST00000442992.6	2235	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	178.237510081352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGATTAAAGTGAGC	4532873	True	NA	-10	True	NA	NA	NA	4538889	4560018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4545218_4545313_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20072.known	chr12	+	2163	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	151.242263346666	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532873	True	NA	19	True	ATTAAA	-16	NA	4538889	4560047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20077.known	chr12	+	2112	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_7	50.6802168010359	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532873	True	NA	19	True	ATTAAA	-16	NA	4538889	4560047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20079.nic	chr12	+	2206	9	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	134.083870674291	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532827	True	NA	19	True	ATTAAA	-16	NA	4538843	4560047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556551_4558856
transcript_20083.known	chr12	+	787	8	FSM	ENSG00000111247.15	ENST00000544927.5	787	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	145.875541025176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGCCACTAGCACC	4532913	True	NA	NA	False	NA	NA	NA	4538929	4558970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553090_4558856
transcript_20084.nic	chr12	+	2008	8	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	144.189076548532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532827	True	NA	19	True	ATTAAA	-16	NA	4538843	4560047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4558856
transcript_20093.nnic	chr12	+	1949	15	NIC	ENSG00000255639.3	novel	3317	15	NA	NA	3	76928	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	506.960233718019	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGTGCATTATGCCAT	4634951	True	NA	27	True	AATAAA	-18	NA	4649103	4851112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4850737
transcript_20104.known	chr12	+	8356	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_1	39.8968670449197	1079	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTGAGAGCTGCAATT	4634961	True	NA	NA	False	AATAAA	-28	NA	4649113	4694317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
transcript_20121.known	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.483844059096	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	4604106	True	NA	19	True	CATAAA	-20	NA	4604896	4613873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
transcript_20122.known	chr12	-	3334	6	FSM	ENSG00000111254.8	ENST00000228850.6	3334	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.12409987036266	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCACATGTTTTGTTT	-4648893	True	NA	NA	False	ATTAAA	-15	NA	4649051	4615517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_4615895_4626495_4628806_4638100_4638197_4641898_4642005_4645054_4645193_4648744
transcript_20123.known	chr12	-	1249	4	FSM	ENSG00000255474.1	ENST00000527518.1	1249	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAACTGTTGATTCTCC	-4719999	True	NA	NA	False	AATAAA	-38	NA	4720102	4700416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_4701180_4703312_4703441_4704177_4704298_4719864
transcript_20126.known	chr12	+	1341	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	5431994	True	NA	20	True	AGTAAA	-14	NA	5432107	5495299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_5432343_5494193
transcript_20130.known	chr12	+	1566	9	FSM	ENSG00000010278.15	ENST00000382518.6	1566	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	940.073725499761	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTAATTATT	NA	False	NA	20	True	AATAAA	-27	NA	6199714	6238271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200073_6200421_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20131.known	chr12	+	1432	9	FSM	ENSG00000010278.15	ENST00000538834.6	1432	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	939.094477408956	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGACTGGTTTTTGTTT	6199532	True	NA	8	True	AATAAA	-15	NA	6199874	6238259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200073_6200383_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20134.known	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1000.91582552976	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	6199498	True	NA	-4	True	AATAAA	-3	NA	6199840	6238247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20136.known	chr12	+	1225	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	161.502637875721	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	6189024	True	NA	15	True	AATAAA	-22	NA	6200399	6238266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20142.known	chr12	+	1360	9	FSM	ENSG00000010278.15	ENST00000610354.5	1360	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1243.52462153952	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	6188951	True	NA	-4	True	AATAAA	-3	NA	6200326	6238247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200566_6200892_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20143.known	chr12	+	1195	8	FSM	ENSG00000010278.15	ENST00000382515.7	1195	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1007.17872276565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATTTGATACATAATAAA	6200767	False	NA	-26	True	NA	NA	NA	6200796	6238225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20145.known	chr12	-	1339	6	FSM	ENSG00000067182.8	ENST00000366159.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.6703481069937	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGGCTTGGGGGTTA	-6341836	False	NA	NA	False	NA	NA	NA	6341848	6331239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6331994_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_20147.known	chr12	+	1781	7	FSM	ENSG00000139192.12	ENST00000266556.8	1781	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5723301886761	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTTGTTATTACT	6452005	True	NA	23	True	AATACA	-37	NA	6452041	6462316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6452313_6453066_6453298_6453446_6453717_6457405_6457745_6458644_6458948_6460854_6460939_6462033
transcript_20150.nnic	chr12	-	1139	6	Fusion	ENSG00000215039.8_ENSG00000139190.17	novel	3139	4	NA	NA	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13.5292276202302	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6469891	True	NA	NA	False	ATTAAA	-28	NA	6470677	6447615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_6448151_6448639_6448758_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20153.known	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	18.8148877222268	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469867	True	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20154.known	chr12	-	747	5	FSM	ENSG00000139190.17	ENST00000535180.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.2142525225417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCCCAGCCCTATC	-6469859	True	NA	NA	False	NA	NA	NA	6470645	6462676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6462970_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20157.nnic	chr12	-	770	4	NIC	ENSG00000215039.8	novel	865	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	17.6823829464998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6451127	True	NA	NA	False	ATTAAA	-28	NA	6451517	6447615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6448151_6448639_6448738_6450892_6450981_6451468
transcript_20158.known	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	8.48528137423857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20159.nnic	chr12	-	698	3	NNC	ENSG00000215039.8	novel	700	3	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	20.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6450784	False	NA	NA	False	ATTAAA	-28	NA	6451174	6447615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_6448151_6448639_6448738_6451109
transcript_20160.nnic	chr12	-	691	3	NIC	ENSG00000215039.8	novel	700	3	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	17.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6451136	True	NA	NA	False	ATTAAA	-28	NA	6451526	6447615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6448151_6448639_6448738_6451468
transcript_20162.known	chr12	-	700	3	FSM	ENSG00000215039.8	ENST00000504270.2	700	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	21.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6451125	True	NA	NA	False	ATTAAA	-28	NA	6451515	6447615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6448151_6448639_6448758_6451468
transcript_20163.known	chr12	-	2736	5	FSM	ENSG00000139190.17	ENST00000396308.4	2736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.017180121086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6464487_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20165.known	chr12	-	343	3	FSM	ENSG00000111639.8	ENST00000540949.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1400.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCGATAGAAGAGAAAGC	-6480910	True	NA	-161	True	AATAAA	-42	NA	6493295	6492280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493250
transcript_20166.known	chr12	-	814	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	1313	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCACATACTTTTGTT	-6490613	True	NA	-27	True	AATAAA	-21	NA	6493840	6492146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493458
transcript_20168.known	chr12	-	472	3	FSM	ENSG00000111639.8	ENST00000543959.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	1370	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGATAGCCACATACTT	-6493695	False	NA	-32	True	AATAAA	-16	NA	6493718	6492151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493673
transcript_20169.known	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1426	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-6490614	True	NA	17	True	NA	NA	NA	6493841	6492102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493716
transcript_20170.known	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	175.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-6480877	True	NA	0	True	AATATA	-20	NA	6493262	6491885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493057
transcript_20173.known	chr12	+	1348	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	8558.92833537003	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	5989553	False	NA	19	True	AATAAA	-7	NA	6534533	6538359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20176.known	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	8918.08294353417	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	6535167	False	NA	-25	True	NA	NA	NA	6535301	6538315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_2018.known	chr1	+	4377	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	31.1697859401626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	26787539	True	NA	NA	False	AATAAA	-16	NA	26787966	26800659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
transcript_20184.known	chr12	+	1285	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	21253	junction_1	1792.38254496634	30752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	5989536	True	NA	31	True	AATAAA	-19	NA	6534516	6538371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20185.known	chr12	+	1266	9	FSM	ENSG00000111640.15	ENST00000396856.5	1266	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	8629.17694148753	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCAATAAAGTACCCT	5989551	False	NA	0	True	NA	NA	NA	6534531	6538340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536818_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20186.known	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	24885	junction_4	849.448392445693	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	6534251	False	NA	-1	True	NA	NA	NA	6534753	6538339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20189.known	chr12	-	2736	17	FSM	ENSG00000111641.12	ENST00000382421.7	2736	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	164.994696884476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558490	True	NA	-2	True	AATACA	-17	NA	6568278	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6564149_6564249_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20190.known	chr12	-	2701	16	FSM	ENSG00000111641.12	ENST00000399466.6	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	135.092495062539	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558498	True	NA	-2	True	AATACA	-17	NA	6568286	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_20191.known	chr12	-	3038	16	FSM	ENSG00000111641.12	ENST00000541778.5	3038	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	121.132874701021	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568663	False	NA	-2	True	AATACA	-17	NA	6568691	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20192.nic	chr12	-	2737	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	4	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	111.47368398964	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558522	True	NA	-2	True	AATACA	-17	NA	6568310	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_20193.known	chr12	-	2650	16	FSM	ENSG00000111641.12	ENST00000322166.10	2650	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	112.270625425056	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558503	True	NA	-2	True	AATACA	-17	NA	6568291	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20196.nic	chr12	-	2824	15	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-13	0	intron_retention	FALSE	non_canonical	1	93	junction_8	95.1634737422604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558557	True	NA	-2	True	AATACA	-17	NA	6568345	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6557643_6560097_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20202.nic	chr12	-	1359	8	ISM	ENSG00000111642.16	ENST00000644801.1	5326	34	-158	21670	43	0	5prime_fragment	FALSE	canonical	3	155	junction_5	45.345386552908	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTCTCTTCTGTAT	-6607526	False	291	NA	False	AAAAAG	-10	NA	6607539	6600534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
transcript_20203.known	chr12	-	1267	8	FSM	ENSG00000111642.16	ENST00000545942.6	1267	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	100.018161616085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTCTCTTCTGTAT	-6606696	False	NA	NA	False	AAAAAG	-10	NA	6606709	6600534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6606582
transcript_20204.known	chr12	-	1002	6	FSM	ENSG00000111641.12	ENST00000542015.1	1002	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	167.767696533033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCCTGAAACCTAAGGA	-6558493	True	NA	NA	False	NA	NA	NA	6568281	6557220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560744_6567815_6567923_6568206
transcript_20206.known	chr12	-	508	2	FSM	ENSG00000111641.12	ENST00000546053.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAAGAGGAAGTAGTG	-6558503	True	NA	NA	False	NA	NA	NA	6568291	6567499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6567923_6568206
transcript_20207.known	chr12	-	2751	17	FSM	ENSG00000111641.12	ENST00000545200.5	2751	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	165.014002720224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558494	True	NA	-2	True	AATACA	-17	NA	6568282	6556870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6558015_6558138_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20208.known	chr12	-	1150	9	FSM	ENSG00000111653.20	ENST00000488381.5	1150	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	64.1248781675256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGCACAGTGCTGTCA	-6659861	True	NA	NA	False	NA	NA	NA	6663129	6651095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6655637_6655914_6656726_6656799_6663064
transcript_20212.known	chr12	-	1348	8	FSM	ENSG00000111653.20	ENST00000446105.6	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.5879974377449	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGGGTAGGTAAATAA	-6659874	True	NA	-59	True	NA	NA	NA	6663142	6650625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20214.known	chr12	-	741	8	FSM	ENSG00000111653.20	ENST00000412586.6	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.5879974377449	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	-6659833	True	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_2022.known	chr1	+	4673	4	FSM	ENSG00000060642.12	ENST00000674202.1	4673	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	33.0252428706689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	26787522	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26788269_26790758_26790894_26794112_26795235_26797562
transcript_20220.known	chr12	-	776	7	FSM	ENSG00000111653.20	ENST00000469749.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	54.5967540752704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGCAGCCACTAACGGTA	-6659846	True	NA	NA	False	NA	NA	NA	6663114	6651011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6656726_6656799_6663064
transcript_20221.known	chr12	-	678	7	FSM	ENSG00000111653.20	ENST00000444704.5	678	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	58.4249280891489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	-6659833	True	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6663064
transcript_20223.known	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	58.4306331378404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-6659874	True	NA	28	True	AGTAAA	-15	NA	6663142	6650538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
transcript_20227.known	chr12	-	602	7	FSM	ENSG00000111653.20	ENST00000423703.6	602	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	59.9518325176322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	-6659833	True	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20228.known	chr12	-	942	6	FSM	ENSG00000111653.20	ENST00000472002.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	56.6462708393059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCGCAGCCACTAACGG	-6659846	True	NA	NA	False	NA	NA	NA	6663114	6651013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6653051_6656726_6656799_6663064
transcript_20234.nnic	chr12	-	865	4	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	76.6913003903021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-6663139	False	NA	-24	True	AATAAA	-15	NA	6663151	6650590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6651235_6651323_6651386_6656726_6656799_6663064
transcript_20235.known	chr12	-	401	2	FSM	ENSG00000111653.20	ENST00000493267.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAGGCCTAGGCGGGC	-6659836	True	NA	NA	False	NA	NA	NA	6663104	6656437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6656799_6663064
transcript_20236.known	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	84.5917253636548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-6689499	False	NA	77	True	NA	NA	NA	6689510	6666647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_20238.known	chr12	-	3266	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	69.8872107200039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6689499	False	NA	-2	True	AATAAA	-15	NA	6689510	6666476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_20239.nic	chr12	-	2735	10	NIC	ENSG00000126746.18	novel	3008	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_9	65.3051715570732	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6689499	False	NA	-13	True	TATAAA	-18	NA	6689510	6666737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_20240.nic	chr12	-	2753	9	NIC	ENSG00000126746.18	novel	2514	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	93.2962351866355	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6689565	True	NA	-13	True	TATAAA	-18	NA	6689576	6666737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_20243.nnic	chr12	-	1168	6	NNC	ENSG00000139200.14	novel	2711	5	NA	NA	141	1596	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	20.9914268214431	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTGGAAATCCTCACCT	-6700646	False	NA	-16	True	AATAAA	-18	NA	6700659	6692194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_6692447_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_20244.known	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.10478253872366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-6700802	False	NA	-6	True	AATAAA	-15	NA	6700815	6693790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_20246.known	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	125.749670344843	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	6721861	True	NA	11	True	ATTAAA	-18	NA	6724070	6731807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20249.known	chr12	+	1831	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	71.7831200668417	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6721836	True	NA	40	True	AATAAA	-24	NA	6724045	6731865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20251.known	chr12	+	1832	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	128.51204978046	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	6721869	True	NA	3	True	ATTAAA	-39	NA	6724078	6731828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20253.known	chr12	+	1707	8	FSM	ENSG00000111652.10	ENST00000534877.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	144.077076877735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAGAAATCTATCTAC	6723557	False	NA	17	True	AATAAA	-1	NA	6724297	6731842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724331_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20254.nic	chr12	+	1797	8	NIC	ENSG00000111652.10	novel	1707	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	143.038171015107	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6724149	False	NA	40	True	AATAAA	-24	NA	6724278	6731865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_6724379_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20256.known	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	178.476655803124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	6723988	True	NA	48	True	AATAAA	-32	NA	6724013	6731873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20258.known	chr12	+	898	7	FSM	ENSG00000111652.10	ENST00000538375.5	898	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	152.254629559243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCAGAGAGCCTTCT	6721925	True	NA	NA	False	NA	NA	NA	6724134	6731097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_2026.known	chr1	+	2181	4	FSM	ENSG00000060642.12	ENST00000374145.6	2181	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2946871503895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAAGTGGGACCATT	26787749	False	NA	-23	True	NA	NA	NA	26788176	26798268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26788395_26790758_26790894_26794112_26795235_26797562
transcript_20261.known	chr12	+	1728	7	FSM	ENSG00000111652.10	ENST00000543939.5	1728	7	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	197.455480214317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGACGCAGAAATAAATC	6721909	True	NA	-1	True	ATTAAA	-35	NA	6724118	6731824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724267_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20268.nic	chr12	+	1955	6	ISM	ENSG00000111652.10	ENST00000543939.5	1728	7	161	-41	-7	0	3prime_fragment	FALSE	canonical	3	54	junction_1	159.604009974687	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6724150	False	NA	40	True	AATAAA	-24	NA	6724279	6731865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20272.known	chr12	+	2034	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	22.2617010431219	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	6723546	True	NA	50	True	AATAAA	-34	NA	6724286	6731875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_2028.known	chr1	+	4972	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	47.4856703531591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	26787830	True	NA	NA	False	AATAAA	-9	NA	26788194	26800652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
transcript_20280.known	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_5	303.317387401382	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-6732693	True	NA	-10	True	AATAAA	-18	NA	6753141	6747995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_20291.known	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_2	173.207065387068	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	6745327	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_20295.known	chr12	-	570	2	FSM	ENSG00000089693.11	ENST00000536249.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	3779	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAGTTGGGGAAAGGGT	-6752933	False	20448	NA	False	NA	NA	NA	6752967	6751821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6752363_6752938
transcript_20296.nnic	chr12	+	1682	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4484	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	6818264	True	NA	4	True	AATAAA	-17	NA	6818537	6820799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_6818651_6818846_6818915_6819298
transcript_20297.nnic	chr12	+	2150	15	NNC	ENSG00000110811.20	novel	2129	14	NA	NA	-825	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	30.4580675281775	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCAGTCAAGTGT	6827424	False	NA	24	True	AATAAA	-19	NA	6827581	6839847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_6827633_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_20298.known	chr12	+	1610	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.74536878161602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821430	False	NA	11	True	ATTAAA	-23	NA	6821703	6827421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
transcript_20300.known	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.1478150704935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821663	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
transcript_20304.nic	chr12	-	1160	6	NIC	ENSG00000111665.12	novel	1144	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	134.580236290475	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-6844023	True	NA	-14	True	ATTAAA	-34	NA	6851318	6848827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6849199_6849322_6849414_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20307.known	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	141.433235132341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843957	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
transcript_20308.known	chr12	-	1144	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_5	20.1395134002786	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-6843991	True	NA	-14	True	ATTAAA	-34	NA	6851286	6848827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20313.known	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	149.244765402342	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	-6843954	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20316.known	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	17.6546736021938	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	-6843963	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
transcript_20317.known	chr12	+	3083	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_1	53.4620791385555	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	6837458	True	NA	4	True	AATAAA	-4	NA	6852147	6866620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_20318.known	chr12	+	3162	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	161.86592037018	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	6837460	True	NA	16	True	AATAAA	-16	NA	6852149	6866632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_20322.known	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	274	junction_1	64.1246204054945	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	6908869	True	NA	22	True	ATTAAA	-16	NA	6914579	6923697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_20327.known	chr12	+	1911	10	FSM	ENSG00000111674.9	ENST00000545045.6	1911	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	179.05368530757	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTCTAAGGAGTCTT	6908899	True	NA	23	True	ATTAAA	-17	NA	6914609	6923698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_20328.known	chr12	+	1615	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.89481191400338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	NA	False	NA	23	True	AATAAA	-15	NA	6904732	6914229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_2033.known	chr1	+	5045	8	FSM	ENSG00000204160.12	ENST00000374142.9	5045	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8.9511143987546	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTCTGGTGGCGCCT	26824212	True	NA	NA	False	AATAAA	-25	NA	26826687	26857604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26827140_26832446_26832608_26848607_26848758_26850300_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725
transcript_20330.known	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	5031.48849469242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	6867503	True	NA	NA	False	NA	NA	NA	6868099	6870383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_20331.known	chr12	+	1587	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	0	0	0	0	multi-exon	FALSE	canonical	2	192	junction_1	4963.81021886301	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAACATCTCTTACTAT	6867517	True	NA	17	True	TATAAA	-45	NA	6868113	6870939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_20336.known	chr12	+	1208	7	FSM	ENSG00000010626.15	ENST00000323702.9	1208	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	5.14511634681104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	6904662	True	NA	22	True	AATAAA	-14	NA	6904840	6914228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6913890
transcript_2034.known	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	26862761	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26863100_26864500
transcript_20340.known	chr12	+	1061	5	FSM	ENSG00000010626.15	ENST00000622489.4	1061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.96419413859206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGTTTGTGAGACATTG	NA	False	NA	35	True	AATAAA	-27	NA	6904732	6914241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6913890
transcript_20342.known	chr12	+	845	4	FSM	ENSG00000240370.6	ENST00000421824.1	845	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	5.90668171555645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCACTACCCGCCGGCT	6873060	True	NA	NA	False	NA	NA	NA	6873655	6884741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6873782_6882195_6882328_6883703_6883920_6884370
transcript_20347.known	chr12	+	1438	3	FSM	ENSG00000240370.6	ENST00000412023.5	1438	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTAGGCTCGAGCCGCTG	6873376	False	NA	NA	False	NA	NA	NA	6873388	6884616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6873782_6882195_6882328_6883703
transcript_20349.known	chr12	+	587	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	6873466	False	NA	NA	False	NA	NA	NA	6873478	6884438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6873782_6883703_6883920_6884370
transcript_2035.known	chr1	-	4665	5	FSM	ENSG00000142751.15	ENST00000374135.9	4665	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	10.5593560409714	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTATTCTCTTTT	-26887587	True	NA	0	True	AATAAA	-18	NA	26890283	26876131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685
transcript_20350.known	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	43	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6871997	True	NA	-5	True	AGTAAA	-27	NA	6873285	6870934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6871320_6872237_6872987_6873214
transcript_20352.known	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	51	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6872015	True	NA	-5	True	AGTAAA	-27	NA	6873303	6870934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6871320_6872237_6872998_6873245
transcript_20357.nic	chr12	+	1979	5	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	9727	0	-12	0	3prime_fragment	FALSE	canonical	3	78	junction_1	17.5783958312469	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6937513	True	NA	28	True	AAAACA	-21	NA	6937685	6942321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_20358.known	chr12	+	662	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	442.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6942550	False	NA	15	True	AATAAA	-16	NA	6943833	6946002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6944174_6944475_6944566_6945770
transcript_20359.known	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	60	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6927076	True	NA	15	True	AATAAA	-16	NA	6944021	6946002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6944174_6944475_6944653_6945770
transcript_20362.known	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	439	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	6943988	False	NA	9	True	AATAAA	-10	NA	6944121	6945996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6944174_6944379_6944653_6945770
transcript_20364.known	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	25.4816709725943	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945113	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_20366.known	chr12	+	2161	16	FSM	ENSG00000111679.17	ENST00000318974.14	2161	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34.694860330218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6951338	False	NA	10	True	AATAAA	-18	NA	6951355	6961316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_20367.nic	chr12	+	2039	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	0	0	intron_retention	TRUE	canonical	2	6	junction_1	35.3839725045688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945110	True	NA	10	True	AATAAA	-18	NA	6946573	6961316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_6946740_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_20368.nnic	chr12	+	1794	14	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	14	0	intron_retention	FALSE	canonical	2	6	junction_1	36.5046807406438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945160	True	NA	10	True	AATAAA	-18	NA	6946623	6961316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_6946740_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_2037.nnic	chr1	+	1560	10	NNC	ENSG00000090273.14	novel	1792	9	NA	NA	-73	211	at_least_one_novel_splicesite	TRUE	canonical	3	111	junction_2	1247.58894385912	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTGTGTCCTCTCTTG	NA	False	NA	14	True	ATTAAA	-15	NA	26921669	26946395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26921930_26924088_26924167_26934248_26934420_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_20370.known	chr12	+	350	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACCTGTCTTTTGTCTA	6962757	False	NA	28	True	AATAAA	-42	NA	6963245	6964447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6963349_6964200
transcript_20376.known	chr12	-	1379	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	647.666237776492	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	-6940497	True	NA	22	True	NA	NA	NA	6970664	6965326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20377.known	chr12	-	1354	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	742.497306392421	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	-6970737	False	NA	22	True	NA	NA	NA	6970753	6965326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20379.known	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	669.670243011439	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970700	False	NA	-3	True	AATAAA	-21	NA	6970716	6965351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20387.known	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_4	52.9897133623331	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	-7008809	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_20388.known	chr12	+	2972	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	6.81999975764038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	6	True	AATAAA	-18	NA	7060514	7071032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_20389.known	chr12	+	2682	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.23618302029536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	7060530	True	NA	6	True	AATAAA	-18	NA	7060717	7071032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_20395.known	chr12	-	2902	11	FSM	ENSG00000111684.11	ENST00000535479.5	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_6	50.0795367390714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTAGCATTCCTGACTG	-7008810	True	NA	-9	True	GATAAA	-26	NA	7018477	6976185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6976892_6977133_6977263_6977366_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_20404.known	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_4	41.2960046493604	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	6957764	True	NA	4	True	AATAAA	-16	NA	6970912	6979936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
transcript_20409.known	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	281.964980095047	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	6957912	False	NA	NA	False	NA	NA	NA	6971060	6975977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
transcript_20411.known	chr12	-	2488	11	FSM	ENSG00000159403.18	ENST00000647956.2	2488	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	12.9011627382961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGCAAAATGAGTCAAAA	-7091979	True	NA	-12	True	AATAAA	-19	NA	7092445	7080218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7091451_7091681_7092386
transcript_20413.known	chr12	-	1881	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	12.5560471880148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGCTGGACACCCA	-7090326	False	466	NA	False	AAAACA	-1	NA	7090792	7080740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
transcript_20417.known	chr12	-	957	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-7128812	False	77	-14	True	TTTAAA	-16	NA	7128889	7123685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
transcript_20418.nnic	chr12	-	1090	4	Fusion	ENSG00000256967.1_ENSG00000139194.8	novel	957	4	NA	NA	220	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-7129955	False	77	-14	True	TTTAAA	-16	NA	7130032	7123685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_7124175_7124628_7124731_7128239_7128419_7129712
transcript_20419.known	chr12	-	813	3	FSM	ENSG00000139178.12	ENST00000545337.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTCAGATTTGTTTT	-7108476	True	NA	0	True	AGTAAA	-17	NA	7109210	7101604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7102088_7108250_7108480_7109109
transcript_20420.known	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	-7108394	False	NA	NA	False	NA	NA	NA	7109128	7108144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7108480_7109109
transcript_20423.known	chr12	+	4013	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_4	12.2389700360468	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	7129150	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
transcript_20425.known	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	25.4235236652112	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187069	True	NA	16	True	AATAAA	-25	NA	7189685	7211459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20427.known	chr12	+	2253	16	FSM	ENSG00000139197.11	ENST00000434354.6	2253	16	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	31.4461797715115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAATTCAAGGGCTGT	7187070	True	NA	NA	False	NA	NA	NA	7189686	7210431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20429.known	chr12	+	3252	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	21.4966774841403	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	NA	False	NA	40	True	AATAAA	-21	NA	7189583	7211483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20431.nic	chr12	+	3165	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	29.5356063221381	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187075	True	NA	16	True	AATAAA	-25	NA	7189691	7211459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20433.known	chr12	-	1236	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTGTTTATAATTT	-7689619	True	NA	15	True	AATAAA	-42	NA	7695775	7689783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7690705_7695460
transcript_20434.known	chr12	+	1100	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	2.49443825784929	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	7710735	True	NA	NA	False	AATAAA	-27	NA	7711432	7717559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
transcript_20438.nnic	chr12	+	2225	5	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	389.626423641929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7789163	False	NA	31	True	AATAAA	-19	NA	7789322	7799146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678_7795307_7798342
transcript_20449.nnic	chr12	+	1656	4	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	-79	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	442.177440501988	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7789163	False	NA	31	True	AATAAA	-19	NA	7789322	7799146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7789766_7792949_7793161_7796883_7797082_7798342
transcript_20450.known	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_3	122.158367157828	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7786224	True	NA	31	True	AATAAA	-19	NA	7789401	7799146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
transcript_20452.known	chr12	+	870	4	FSM	ENSG00000111704.11	ENST00000526286.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	404.626576817028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGTGAAACTGATATT	7789567	False	NA	NA	False	NA	NA	NA	7789614	7795095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794726
transcript_20466.known	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	2864	junction_5	185.662444263444	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-7899769	True	NA	-12	True	AATAAA	-19	NA	7936187	7919229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_2048.known	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	FALSE	canonical	3	2986	junction_5	88.0943209009525	3732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	26862550	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_20492.known	chr12	-	1784	5	FSM	ENSG00000059804.16	ENST00000495813.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_2	184.80936123476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGAGACTGTGTCT	-7899751	True	NA	NA	False	NA	NA	NA	7936169	7929503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_20495.known	chr12	-	763	3	FSM	ENSG00000059804.16	ENST00000476634.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	3286	junction_1	70	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATTATTTTACCCA	-7899769	True	NA	NA	False	TATAAA	-1	NA	7936187	7932645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7933148_7933809_7933903_7936019
transcript_20499.known	chr12	+	2634	8	FSM	ENSG00000089818.18	ENST00000339754.11	2634	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	27.2598980338578	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTTTTAAGAAGTTGA	8080055	True	NA	130	True	AATAAA	-30	NA	8082273	8097881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_20501.known	chr12	+	2446	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.5051379334713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	8080049	True	NA	18	True	ATTAAA	-14	NA	8082267	8097769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_20504.known	chr12	+	2067	6	FSM	ENSG00000089818.18	ENST00000638787.1	2067	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	98.2718677954174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTATTCTTGCAGAGCCA	8080061	True	NA	NA	False	NA	NA	NA	8082279	8097511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092871_8093056_8095600_8095704_8096041
transcript_20505.known	chr12	+	5166	6	FSM	ENSG00000089818.18	ENST00000640648.1	5166	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	27.938503896952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGGTAATTAAAAATA	NA	False	NA	-11	True	TATAAA	-20	NA	8081894	8097740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8092785_8092871_8093056_8095600_8095704_8096041
transcript_20506.known	chr12	-	1783	1	FSM	ENSG00000279865.1	ENST00000624929.1	1783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTCCTTATTTCTG	-8082074	True	NA	NA	False	AATAAA	-21	NA	8082163	8080380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8080400_8082200
transcript_20507.known	chr12	+	2517	8	FSM	ENSG00000089818.18	ENST00000638237.1	2517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	88.6695309240199	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTTTATCTTTTAA	8080047	True	NA	17	True	ATTAAA	-13	NA	8082265	8097768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093044_8095600_8095704_8096041
transcript_20511.nic	chr12	-	986	4	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-8395916	True	NA	NA	False	AATAAA	-19	NA	8396793	8384116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_8384422_8390269_8390512_8390901_8390970_8396422
transcript_20515.known	chr12	-	662	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8389875	False	NA	0	True	TATAAA	-23	NA	8390752	8356962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8357142_8390269
transcript_20516.known	chr12	-	456	2	FSM	ENSG00000226091.7	ENST00000536539.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-8389543	False	NA	NA	False	AATAAA	-19	NA	8390420	8384116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8384422_8390269
transcript_20520.known	chr12	+	620	2	FSM	ENSG00000256552.2	ENST00000537764.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATTTCTTTTTCTTCT	8320284	True	NA	NA	False	NA	NA	NA	8320380	8369555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8320427_8368981
transcript_20524.known	chr12	+	1589	9	FSM	ENSG00000166532.16	ENST00000544257.5	1589	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	401.279516048352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8681253	False	NA	35	True	AATAAA	-26	NA	8681690	8783095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_20525.nic	chr12	+	1841	9	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_6	385.836408825036	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8687006	True	NA	35	True	AATAAA	-26	NA	8697917	8783095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_20527.known	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	36.6464186517591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8687079	True	NA	10	True	AATATA	-21	NA	8697990	8777191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_20530.known	chr12	+	650	3	FSM	ENSG00000166532.16	ENST00000510357.2	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8779797	False	NA	35	True	AATAAA	-26	NA	8779811	8783095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8780113_8780574_8780740_8782911
transcript_20531.known	chr12	+	1893	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8779016	False	NA	35	True	AATAAA	-26	NA	8779030	8783095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8780740_8782911
transcript_20532.known	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2546	junction_5	486.967820459695	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	8913946	False	NA	18	True	ATTAAA	-21	NA	8914508	8941467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_20543.known	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_1	40.0444197804832	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	-8936371	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_20552.known	chr12	-	2305	5	FSM	ENSG00000003056.8	ENST00000536844.5	2305	5	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	357.563543303844	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGCCTTGTCATTTGT	-8949656	False	NA	NA	False	ATTAAA	-14	NA	8949761	8940363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8941941_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_20559.known	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-8936336	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8945585_8946228_8946406_8949487
transcript_20562.known	chr12	+	701	2	FSM	ENSG00000249790.3	ENST00000654855.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGCTTGACCTTTTC	8788259	False	NA	NA	False	NA	NA	NA	8788269	8790183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8788787_8789999
transcript_20564.known	chr12	+	723	2	FSM	ENSG00000249790.3	ENST00000422780.3	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTCCCAACAGCAGTT	8788246	False	NA	NA	False	NA	NA	NA	8788256	8794497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8788787_8794304
transcript_20566.known	chr12	+	1972	2	FSM	ENSG00000249790.3	ENST00000514568.2	1972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCATGCTGCT	8788263	False	NA	NA	False	AATAAA	-16	NA	8788273	8795789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8788761_8794304
transcript_20568.known	chr12	+	592	5	FSM	ENSG00000139187.10	ENST00000539240.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	11.0989864402116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCGGTGCCATCAAC	8949284	True	NA	NA	False	NA	NA	NA	8950043	9009448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8950237_8992205_8992311_8995118_8995289_9008974_9009076_9009425
transcript_20575.known	chr12	+	427	4	FSM	ENSG00000139187.10	ENST00000544226.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	8.9938250421547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAAGGTCAGACTTTG	8949347	True	NA	NA	False	NA	NA	NA	8950106	9009516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8950237_8992205_8992311_9008974_9009076_9009425
transcript_20581.known	chr12	+	851	3	FSM	ENSG00000139187.10	ENST00000538029.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTAGCTATTTGGGAA	8949365	False	NA	NA	False	AATAAA	-28	NA	8950124	9010063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8950237_9008974_9009076_9009425
transcript_20586.nnic	chr12	-	995	9	NNC	ENSG00000256673.1	novel	400	4	NA	NA	7330	1291	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	13.2234403617213	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGAGTCTATGACTTTT	-9407340	True	NA	-7	True	ATTAAA	-14	NA	9407521	9397063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_9397215_9397614_9397690_9398381_9398443_9399794_9399864_9400235_9400327_9401746_9401860_9402426_9402557_9406307_9406399_9407307
transcript_20596.nnic	chr12	+	603	4	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-130	130	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	6.34209919681348	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	9647399	True	NA	4	True	AATAAA	-18	NA	9647916	9657217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656920
transcript_20598.nnic	chr12	+	960	4	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-130	487	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	6.34209919681348	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGCCTAGAAAACAAAGAT	9647399	True	NA	NA	False	ATTAAA	-23	NA	9647916	9657574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656920
transcript_20600.known	chr12	+	2612	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.39266853573691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	9647529	False	NA	NA	False	GATAAA	-16	NA	9648046	9658412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
transcript_20606.nnic	chr12	-	693	3	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21314	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	8	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAGTTAATTGCCTCA	-9910703	True	NA	-17	True	AATAAA	-16	NA	9911033	9898674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_9898977_9900827_9900876_9910690
transcript_20607.known	chr12	-	425	3	FSM	ENSG00000172243.18	ENST00000310002.4	425	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTATTTTTATGATTC	-10130174	True	NA	NA	False	AATAAA	-16	NA	10130189	10127326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10127443_10127746_10127846_10129979
transcript_20609.known	chr12	+	792	6	FSM	ENSG00000139112.11	ENST00000535576.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	155.23324386226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGAAGCCCAGCAGA	10213425	False	NA	NA	False	NA	NA	NA	10213439	10221852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10213715_10213835_10213975_10214073_10214188_10218062_10218142_10220439_10220559_10221786
transcript_20611.known	chr12	+	531	5	FSM	ENSG00000139112.11	ENST00000544284.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138.998875894735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGAAGGTGAAGACATC	10206227	True	NA	NA	False	NA	NA	NA	10212853	10221950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10212945_10213141_10213220_10218062_10218142_10220439_10220559_10221786
transcript_20612.known	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	10.3708994574027	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	10206250	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
transcript_20613.known	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	144.529120479807	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	10213414	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
transcript_20614.known	chr12	-	649	3	FSM	ENSG00000256288.1	ENST00000539009.1	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	-10337942	True	NA	-6	True	AATAAA	-20	NA	10338292	10332860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10333064_10336111_10336310_10338044
transcript_20618.known	chr12	+	769	3	FSM	ENSG00000245648.2	ENST00000666750.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTGTTATTGTTT	10363665	True	NA	NA	False	AGTAAA	-12	NA	10363707	10380042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10364034_10374034_10374137_10379701
transcript_20619.known	chr12	+	868	2	FSM	ENSG00000256039.3	ENST00000544591.2	1616	2	1	747	1	-747	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGGTGATTCTTATGC	NA	False	NA	NA	False	NA	NA	NA	10553362	10558049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10553517_10557335
transcript_20627.known	chr12	-	1057	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	349.563155953255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	-10607543	True	NA	-10	True	AATAAA	-16	NA	10613594	10606012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
transcript_20628.known	chr12	-	705	6	FSM	ENSG00000111196.10	ENST00000540074.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	360.339284563868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGTATATTTAATTA	-10607540	True	NA	9	True	ATTAAA	-25	NA	10613591	10606259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613540
transcript_20629.known	chr12	-	868	6	FSM	ENSG00000111196.10	ENST00000545236.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	353.587669468266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCAGGCTGTTTGTA	-10607558	True	NA	-1	True	ATTAAA	-15	NA	10613609	10606269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10612639_10612979_10613438
transcript_20640.known	chr12	-	2606	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_2	10.4522724801834	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	-10607558	True	NA	NA	False	AATAAA	-18	NA	10613609	10604192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
transcript_20641.known	chr12	-	666	5	FSM	ENSG00000111196.10	ENST00000539554.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	332.284046412102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	-10607540	True	NA	-10	True	AATAAA	-16	NA	10613591	10606012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613540
transcript_20645.known	chr12	-	559	3	FSM	ENSG00000111196.10	ENST00000544176.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCCAGCCAACGTTAGG	-10607549	True	NA	NA	False	NA	NA	NA	10613600	10609603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10609942_10610621_10610681_10613438
transcript_20646.known	chr12	-	2671	4	FSM	ENSG00000111196.10	ENST00000537852.5	2671	4	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	10.6562449087639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	-10607549	True	NA	-10	True	AATAAA	-16	NA	10613600	10606012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10609942_10610621_10610681_10613438
transcript_20648.known	chr12	-	1931	10	FSM	ENSG00000060138.13	ENST00000228251.9	1931	10	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_3	474.501713951815	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723309	False	NA	-30	True	AATAAA	-20	NA	10723323	10699088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
transcript_20649.nic	chr12	-	1492	9	NIC	ENSG00000060138.13	novel	1931	10	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	1311.81471991093	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10718446	False	548	-30	True	AATAAA	-20	NA	10718460	10699088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10718361
transcript_20655.nic	chr12	-	806	3	ISM	ENSG00000231887.8	ENST00000541977.5	507	5	-76	90697	-12	0	5prime_fragment	FALSE	canonical	3	28	junction_1	28.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATTAAAAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	11171620	10973283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_10973722_11047019_11047189_11171421
transcript_20665.nic	chr12	-	918	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	24.2239550858236	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171642	10845848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_20666.known	chr12	-	680	5	FSM	ENSG00000275778.2	ENST00000535024.6	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	25.9277843249283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGCAGGAAGCATCAT	NA	False	NA	NA	False	NA	NA	NA	11171600	10847138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_20667.nnic	chr12	-	1625	4	NIC	ENSG00000212127.6	novel	1662	5	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	34.3155293643498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTTTGCTGTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	11171642	10937409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_10938578_10973654_10973722_11047019_11047189_11171421
transcript_20670.nnic	chr12	-	831	5	Fusion	ENSG00000111215.12_ENSG00000231887.8	novel	563	4	NA	NA	-14	0	multi-exon	FALSE	canonical	0	0	junction_3	31.2359968625943	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171622	10845848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_10845951_10847044_10847368_10848371_10848408_11047019_11047189_11171421
transcript_20671.known	chr12	-	994	3	FSM	ENSG00000111215.12	ENST00000539285.2	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAGTATACCAATAAAAT	NA	False	NA	-33	True	NA	NA	NA	10848975	10845883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10845951_10847044_10847368_10848371
transcript_20672.known	chr12	-	1662	5	FSM	ENSG00000212127.6	ENST00000381852.4	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	34.5714839137692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTGCTGTTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	11171573	10937407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10938578_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_20674.nic	chr12	+	985	4	ISM	ENSG00000121380.12	ENST00000396367.5	1886	6	15696	322	7865	-311	3prime_fragment	FALSE	canonical	2	5	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTTTCTAGTACTATT	12087063	True	NA	18	True	GATAAA	-18	NA	12087163	12099373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_12087387_12090778_12090850_12094663_12094931_12098949
transcript_20675.known	chr12	-	5532	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAGTATTCTATGATTTA	-12350056	True	NA	NA	False	AATAAA	-25	NA	12350242	12326055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
transcript_20677.known	chr12	-	1540	2	FSM	ENSG00000205791.4	ENST00000381800.4	1543	2	0	3	0	-3	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGTCTGTCGCATCAAC	NA	False	NA	-2	True	AATAAA	-17	NA	12357067	12355405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12356806_12356927
transcript_20678.known	chr12	+	580	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	37.1154355431208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGCCTGGGGCTGGG	12355246	True	NA	NA	False	NA	NA	NA	12357078	12465783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
transcript_20680.known	chr12	+	6422	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_2	2.86744175568088	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	12355245	True	NA	NA	False	AATAAA	-27	NA	12357077	12471233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
transcript_20683.known	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	6.97614984548545	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	12609362	True	NA	7	True	ATTAAA	-18	NA	12611875	12645108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
transcript_20691.known	chr12	-	553	4	FSM	ENSG00000183150.8	ENST00000540796.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	53.7649204097492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCCGGGGAAGTGGCC	-12695940	True	NA	NA	False	NA	NA	NA	12696207	12662270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
transcript_20692.known	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	7.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	12715731	True	NA	13	True	AATAAA	-18	NA	12717367	12722369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12718315_12718824_12718955_12721035
transcript_20693.known	chr12	+	4335	2	FSM	ENSG00000111276.12	ENST00000614874.2	4335	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGGTAGAATAGGTT	12715731	True	NA	NA	False	AATATA	-38	NA	12717367	12722212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12718315_12718824
transcript_20695.known	chr12	-	1751	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGATTAATGATTCA	-12683390	True	NA	NA	False	CATAAA	-17	NA	12684521	12660890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12662471_12684350
transcript_20698.known	chr12	+	1698	11	FSM	ENSG00000213782.7	ENST00000352940.8	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	205.716528261586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	NA	False	NA	15	True	AATAAA	-21	NA	12813315	12829979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_20699.known	chr12	+	2357	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	42.1160302022876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	12809403	True	NA	15	True	AATAAA	-21	NA	12813353	12829979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_20701.known	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	2.35702260395516	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-12995043	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
transcript_20704.known	chr12	+	2298	8	FSM	ENSG00000171681.13	ENST00000539659.5	2298	8	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	153.868616099607	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTCCCTCACAGCAACGT	14356344	True	NA	NA	False	NA	NA	NA	14365675	14460567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14460494
transcript_20708.known	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_9	42.4807015007992	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	-14567868	False	NA	-9	True	AATAAA	-23	NA	14567883	14503660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
transcript_20715.nnic	chr12	-	1037	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	62	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-14709810	True	NA	-7	True	AATAAA	-18	NA	14710307	14705460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_14705913_14708056_14708345_14710010
transcript_20719.known	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	608	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	14757675	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14774400_14775000
transcript_2072.known	chr1	-	2125	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	7.55902698029904	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTACTTTTCTAATT	-26899254	True	NA	-16	True	AATAAA	-17	NA	26900467	26890487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
transcript_20721.known	chr12	-	4581	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	64.8949564442479	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAAGGGTTATTTATA	-14789369	True	NA	-1	True	ATTAAA	-18	NA	14803478	14784581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_20728.known	chr12	+	1586	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	14803335	True	NA	NA	False	AAGAAA	-26	NA	14803669	14824415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14803752_14822911
transcript_20730.known	chr12	-	2264	5	FSM	ENSG00000134533.6	ENST00000256953.6	2264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTAATCTTTCTTG	-15221334	True	NA	-1	True	AATAAA	-25	NA	15221417	15107782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15109518_15111343_15111418_15121062_15121120_15217428_15217604_15221194
transcript_20731.known	chr12	-	1383	4	FSM	ENSG00000134533.6	ENST00000546331.5	1383	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTAAAATTTTATTT	-15221334	True	NA	NA	False	NA	NA	NA	15221417	15108606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15109518_15111343_15111418_15217428_15217604_15221194
transcript_20732.known	chr12	+	2095	9	FSM	ENSG00000151490.15	ENST00000543886.6	2095	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.61535599791501	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTGTTAGTTCATTT	15322507	False	NA	NA	False	TATAAA	-22	NA	15322521	15517067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762
transcript_20733.known	chr12	-	3873	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	5.9268457040824	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTCTGTCTCATT	-15788709	True	NA	-23	True	AATAAA	-21	NA	15789388	15620161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_20738.known	chr12	+	1874	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_5	124.763282031253	3141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	15855058	True	NA	88	True	AATAAA	-18	NA	15882386	15903478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_20745.known	chr12	+	1698	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	774.393220124634	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	15855062	True	NA	52	True	NA	NA	NA	15882390	15903442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_20757.known	chr12	+	1644	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	17.9230124421092	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGAATCTCTCTAGTT	15908597	True	NA	NA	False	ATTAAA	-25	NA	15911331	16037381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_20759.known	chr12	+	854	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	95.1415701328654	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	15908628	True	NA	NA	False	NA	NA	NA	15911362	16036751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
transcript_20760.nic	chr12	+	1443	8	NIC	ENSG00000023697.13	novel	1644	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	91.1840480141395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTTCCTATAGTTTA	15908549	True	NA	NA	False	ATTAAA	-12	NA	15911283	16037280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_15911415_15956935_15957034_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_20774.known	chr12	+	365	4	FSM	ENSG00000008394.13	ENST00000540126.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1688.77891454809	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTATTCCATTTCTT	16347760	False	NA	1	True	NA	NA	NA	16347796	16363814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
transcript_20776.known	chr12	+	546	3	FSM	ENSG00000008394.13	ENST00000540056.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	78.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAAGAATTCTGTACT	16347741	True	NA	NA	False	AGTAAA	-43	NA	16347777	16364071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347899_16354230_16354379_16363794
transcript_20777.known	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3342	junction_1	189.536862436367	5914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	16277342	True	NA	21	True	AATAAA	-16	NA	16347644	16364410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
transcript_20790.known	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	51.3243363327769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	-16606381	False	NA	67	True	AAGAAA	-37	NA	16606440	16549374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
transcript_20791.known	chr12	-	587	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.4498759303938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATCTATCAACATCAC	-16606689	True	NA	NA	False	AATGAA	-23	NA	16607185	16551227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
transcript_20797.known	chr12	-	3759	4	FSM	ENSG00000048540.16	ENST00000320122.10	3759	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	57.4340201158396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	-16605320	False	NA	-11	True	AATAAA	-20	NA	16605379	16548423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16604864
transcript_20798.known	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	33.5062183283442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-16606103	False	NA	-4	True	AATAAA	-16	NA	16606162	16548371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
transcript_20809.known	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	35.5696499842211	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	19129646	False	NA	12	True	AATAAA	-17	NA	19129793	19376400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
transcript_2081.nnic	chr1	-	1895	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	62	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_4	101.625230627045	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-26959273	True	NA	-17	True	NA	NA	NA	26960406	26949561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
transcript_20814.nic	chr12	+	1056	11	ISM	ENSG00000052126.15	ENST00000429027.7	4797	32	-42	101783	-42	8800	5prime_fragment	FALSE	canonical	1	1	junction_9	117.659508753012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAAATGAGCAAAATTG	19129352	False	NA	-9	True	ATTAAA	-27	NA	19129690	19274617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19270187_19270206_19274515
transcript_20816.nic	chr12	+	1055	10	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-105	99034	-42	8817	5prime_fragment	FALSE	canonical	3	250	junction_5	24.6891789161883	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGAAAAAAAGGCATTA	19129352	False	NA	8	True	ATTAAA	-44	NA	19129690	19274634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515
transcript_20817.nic	chr12	+	1309	8	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-105	107329	-42	522	5prime_fragment	FALSE	canonical	3	250	junction_5	26.4111911963123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTAGCCGGGCATGGTG	19129352	False	NA	NA	False	AAAACA	-32	NA	19129690	19266339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749
transcript_20819.known	chr12	+	1954	4	FSM	ENSG00000052126.15	ENST00000540972.5	1954	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	149.217961385351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGGTTCATTACT	19124398	True	NA	NA	False	AATAAA	-27	NA	19129751	19202003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19200324
transcript_2082.known	chr1	-	1855	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	50.7302232949507	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-26959335	True	NA	-17	True	NA	NA	NA	26960468	26949561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
transcript_20820.nic	chr12	+	887	4	NIC	ENSG00000052126.15	novel	1954	4	NA	NA	-42	83	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	144.058630039609	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTGCTTTTTATC	19129352	False	NA	NA	False	ATTAAA	-25	NA	19129690	19207816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19207265
transcript_20821.known	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	15.9808558939138	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	19431121	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
transcript_20822.nnic	chr12	-	1357	2	Antisense	novelGene_ENSG00000139154.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCATCAACAAGTGGGCG	-19437855	True	NA	NA	False	AAGAAA	-10	NA	19438046	19429823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_19431009_19437874
transcript_2083.nnic	chr1	-	2391	4	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	-595	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	106.145602305931	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-26961047	False	NA	-17	True	NA	NA	NA	26961063	26949561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26960408
transcript_20831.nnic	chr12	-	1541	10	NIC	ENSG00000084453.17	novel	7682	16	NA	NA	-42	8929	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	7.24185366080014	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTTCTAATGAATGT	-21395035	True	NA	NA	False	AATAAA	-19	NA	21395479	21295593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21295793_21297403_21297569_21300347_21300570_21301170_21301270_21304426_21304574_21306881_21306989_21314548_21314682_21318781_21318924_21334587_21334705_21395269
transcript_20834.known	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	58.3092902832244	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	-21496066	True	NA	NA	False	NA	NA	NA	21501551	21469801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
transcript_20835.nic	chr12	-	3504	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	74.4469982978196	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496156	True	NA	-1	True	AATAAA	-23	NA	21501641	21468909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_20837.nic	chr12	-	3656	16	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	77.3892326705294	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496151	True	NA	-1	True	AATAAA	-23	NA	21501636	21468909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501373_21501462
transcript_20839.nic	chr12	-	2266	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-6	-346	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	74.4469982978196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATTATTTTTGTAGT	-21496156	True	NA	-10	True	ATTAAA	-18	NA	21501641	21470147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_20843.known	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_14	33.0316020606612	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496150	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_20844.nic	chr12	-	3530	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	76.9029337833726	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496178	True	NA	-1	True	AATAAA	-23	NA	21501663	21468909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_20845.nic	chr12	-	3458	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	79.3344766395636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496156	True	NA	-1	True	AATAAA	-23	NA	21501641	21468909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501462
transcript_20847.nic	chr12	-	2292	15	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	0	-346	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	76.9029337833726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATTATTTTTGTAGT	-21496178	True	NA	-10	True	ATTAAA	-18	NA	21501663	21470147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_20848.nic	chr12	-	2220	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-6	-346	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	79.3344766395636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATTATTTTTGTAGT	-21496156	True	NA	-10	True	ATTAAA	-18	NA	21501641	21470147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501462
transcript_2085.known	chr1	+	994	8	FSM	ENSG00000186501.15	ENST00000486082.5	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	129.297000296659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCTCAGAAGCACCCT	27319414	True	NA	NA	False	NA	NA	NA	27322253	27335648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_20850.known	chr12	+	4075	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	3.82466981235684	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTTACTTTTTTTT	21437183	True	NA	NA	False	AATAAA	-36	NA	21437654	21471250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_20852.known	chr12	+	1471	11	FSM	ENSG00000121350.16	ENST00000544970.5	1471	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	8.76356092008266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATCATATAAAGTTCCAA	21437233	True	NA	NA	False	ACTAAA	-16	NA	21437704	21468770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_20853.nic	chr12	+	1105	8	NIC	ENSG00000121350.16	novel	4075	12	NA	NA	9	1050	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	7.79586494265272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTGATATTTTGA	21437152	True	NA	NA	False	AGTAAA	-16	NA	21437623	21457112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21456864
transcript_20856.known	chr12	+	562	6	FSM	ENSG00000111711.10	ENST00000542194.1	562	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	227.415918528145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAAAGTCATTTGAAG	21499105	True	NA	NA	False	TTTAAA	-11	NA	21501852	21515746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21507116_21507152_21508382_21508562_21512294_21512377_21515668
transcript_20858.known	chr12	+	1210	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	221.069581806272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAAACTTTTGTGG	21499081	True	NA	-6	True	NA	NA	NA	21501828	21516239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
transcript_2086.known	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	118.384495981902	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319407	True	NA	8	True	AATAAA	-15	NA	27322246	27336400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_20861.known	chr12	+	3253	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	69.3289261419792	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	21499041	True	NA	23	True	AATAAA	-37	NA	21501788	21518408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
transcript_20864.known	chr12	+	700	4	FSM	ENSG00000111711.10	ENST00000545093.5	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	225.531963736111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCATCCATAGGCATTTG	21499069	True	NA	37	True	NA	NA	NA	21501816	21516062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21512294_21512377_21515668
transcript_20866.known	chr12	+	555	2	FSM	ENSG00000111711.10	ENST00000545113.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAAACATCCAAGACTT	21499067	True	NA	NA	False	GATAAA	-17	NA	21501814	21507305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884
transcript_20868.known	chr12	+	1826	3	FSM	ENSG00000134548.11	ENST00000535139.5	1826	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGCACCTGTCATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	21527434	21532523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21527790_21529000_21529085_21531136
transcript_2087.known	chr1	+	986	7	FSM	ENSG00000186501.15	ENST00000478104.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	120.792866787185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTCAAGGTGGCCC	27319445	True	NA	NA	False	NA	NA	NA	27322284	27335824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_2088.known	chr1	+	1511	6	FSM	ENSG00000186501.15	ENST00000608611.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.4195984289604	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319408	True	NA	8	True	AATAAA	-15	NA	27322247	27336400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_20882.known	chr12	-	1538	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_7	3998.15496223456	4031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507589	True	NA	-25	True	AATAAA	-19	NA	21657794	21635341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
transcript_20883.nnic	chr12	-	1341	8	NNC	ENSG00000111716.14	novel	1303	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4067.07381144664	3972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507637	True	NA	-25	True	AATAAA	-19	NA	21657842	21635341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657712
transcript_20884.known	chr12	-	1303	8	FSM	ENSG00000111716.14	ENST00000350669.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	10475	junction_2	988.915629590806	21222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507637	True	NA	-25	True	AATAAA	-19	NA	21657842	21635341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
transcript_20899.nnic	chr12	-	1169	7	NIC	ENSG00000111716.14	novel	1303	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	622	junction_6	4011.88434529212	2505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507638	True	NA	-25	True	AATAAA	-19	NA	21657843	21635341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21657750
transcript_20908.known	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	1273	junction_3	116.186865673802	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	22032953	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
transcript_2091.nnic	chr1	+	1661	13	NIC	ENSG00000142765.18	novel	1936	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	19.7882891854978	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	27341334	True	NA	NA	False	AATAAA	-18	NA	27342021	27353932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
transcript_20913.known	chr12	+	1575	7	FSM	ENSG00000111726.13	ENST00000534981.5	1575	7	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_5	510.032596997486	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTGCTCTAGAAG	22032960	True	NA	26	True	AATAAA	-27	NA	22046224	22065674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22062280_22062435_22065120
transcript_20915.known	chr12	-	4585	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	52.0481826158173	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-22542435	True	NA	-13	True	AATAAA	-18	NA	22544542	22448582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_20918.known	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_24	28.3592712157574	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-22542439	True	NA	-13	True	AATAAA	-18	NA	22544546	22448582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_20922.known	chr12	+	7063	8	FSM	ENSG00000139163.16	ENST00000266517.9	7063	8	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_3	21.6823072798905	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTCATAAATTTTATT	22621036	True	NA	NA	False	AATAAA	-37	NA	22625170	22690665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881
transcript_20925.known	chr12	+	910	3	FSM	ENSG00000139163.16	ENST00000672951.1	910	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	57.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTCTTTACGTTGT	22621007	True	NA	22	True	ATTAAA	-23	NA	22625141	22644415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22625587_22643762_22644023_22644210
transcript_20926.known	chr12	+	1231	3	FSM	ENSG00000139163.16	ENST00000673496.1	1231	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	63	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTAGGGAAGGTCATTC	22625341	False	NA	NA	False	CATAAA	-41	NA	22625381	22657197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22625587_22643762_22644023_22656431
transcript_20939.known	chr12	-	4694	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	245.094287979137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAGGCAGAGGCAGG	-24902260	False	NA	25	True	AAGAAA	-30	NA	24902296	24814802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
transcript_20940.known	chr12	-	1811	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_10	219.4749188404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATATCTGTTTTCTTC	-24901883	True	NA	NA	False	NA	NA	NA	24903075	24817480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
transcript_20941.known	chr12	-	9314	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_7	66.7769421282526	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	-24933113	True	NA	-7	True	AATAAA	-16	NA	24949101	24810023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_20949.known	chr12	-	1360	10	FSM	ENSG00000060982.15	ENST00000539780.5	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	250.785777453267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAACTTACCTTAC	-24933055	True	NA	5	True	AATGAA	-32	NA	24949043	24817808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
transcript_20961.nic	chr12	-	1375	8	ISM	ENSG00000060982.15	ENST00000261192.12	9314	11	-239	26423	-239	0	5prime_fragment	FALSE	canonical	3	720	junction_4	44.7842902484925	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAGTGTTGAAATAATAT	-24949330	False	NA	NA	False	AATAAA	-21	NA	24949340	24836446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_20968.known	chr12	-	521	2	FSM	ENSG00000060982.15	ENST00000355164.3	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAATGTTCCTACTGT	-24933073	True	NA	NA	False	NA	NA	NA	24949061	24945430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24945817_24948926
transcript_20970.known	chr12	-	5306	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	61.8885086264001	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-25239383	True	NA	-5	True	AATAAA	-16	NA	25250929	25205245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_20973.known	chr12	+	1242	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	6.5	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	25194076	True	NA	NA	False	AATAAA	-22	NA	25195236	25205143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_25195338_25203919_25204008_25204090
transcript_20974.known	chr12	-	1696	3	FSM	ENSG00000133703.14	ENST00000686969.1	2957	3	0	1261	0	-1228	multi-exon	FALSE	canonical	1	12	junction_1	37.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTCATTCACTTATTTA	-25239383	True	NA	NA	False	AATAAA	-43	NA	25250929	25233818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_25235227_25245273_25245396_25250763
transcript_20975.known	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	13.2748718344933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	-25958097	True	NA	NA	False	NA	NA	NA	25958541	25952448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
transcript_20976.known	chr12	-	2999	4	FSM	ENSG00000246695.9	ENST00000663256.1	2999	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	22.6617641757114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCGCACCTG	-25959343	True	NA	NA	False	AATACA	-12	NA	25959379	25952540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25959325
transcript_20977.known	chr12	+	4348	3	FSM	ENSG00000123096.12	ENST00000422622.3	4348	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGACGTGCTTTAAA	26195281	True	NA	11	True	AATAAA	-23	NA	26195339	26234779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26195532_26224292_26224380_26230710
transcript_2098.nnic	chr1	+	423	2	NIC	ENSG00000142765.18	novel	1900	15	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	27350745	True	NA	NA	False	AATAAA	-18	NA	27351352	27353932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_27351556_27353712
transcript_20980.nnic	chr12	-	2882	17	NIC	ENSG00000064102.15	novel	2634	17	NA	NA	29	0	intron_retention	FALSE	canonical	3	12	junction_6	112.446654018695	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26937814	True	NA	-17	True	AATAAA	-27	NA	26938275	26905180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914533_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_20984.known	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_6	39.9483553322286	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26933633	True	NA	-17	True	AATAAA	-27	NA	26937981	26905180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_20995.nic	chr12	-	2502	16	NIC	ENSG00000064102.15	novel	2634	17	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	108.047397007054	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26933672	True	NA	-17	True	AATAAA	-27	NA	26938020	26905180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_21.known	ERCC-00054	+	256	1	FSM	ERCC-00054A	DQ516731	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00054_+_0_300
transcript_2100.known	chr1	-	1457	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.34477204006491	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27383281	False	NA	-4	True	AATAAA	-17	NA	27383303	27379175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_21004.known	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	56.2240063397201	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	26933186	True	NA	13	True	ATTAAA	-20	NA	26938469	26966648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
transcript_21007.known	chr12	+	2790	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	50.6620173305406	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	26933216	True	NA	15	True	ATTAAA	-22	NA	26938499	26966650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
transcript_2101.known	chr1	+	2137	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	27391690	True	NA	NA	False	AATAAA	-19	NA	27392621	27395814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27392738_27393793
transcript_21010.known	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	45.8659732263472	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	26933213	True	NA	109	True	NA	NA	NA	26938496	26960846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
transcript_21011.known	chr12	+	865	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	12.3558353285671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGTACGTTGAAAAAT	26933200	True	NA	NA	False	TATAAA	-24	NA	26938483	26957971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
transcript_21012.nic	chr12	-	2079	12	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	-14	448	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	182.453616883989	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGCAGAGCACTGGT	-27014390	False	NA	-14	True	ATTAAA	-29	NA	27014448	26973647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014308
transcript_21014.nnic	chr12	-	1940	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	-30	448	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	193.448210123537	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGCAGAGCACTGGT	-27014406	False	NA	-14	True	ATTAAA	-29	NA	27014464	26973647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27014308
transcript_21019.known	chr12	+	2669	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_3	31.8573208052543	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	27017999	True	NA	20	True	ATTAAA	-22	NA	27022557	27030673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
transcript_2102.known	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	50.2792203599061	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-27477723	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_21024.known	chr12	+	1374	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	27017991	True	NA	NA	False	GGGGCT	-9	NA	27022549	27029485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27022622_27027346_27027448_27028284
transcript_21026.known	chr12	+	1861	1	FSM	ENSG00000275764.1	ENST00000620519.1	1861	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTTTGGGAGGCT	27037081	False	NA	23	True	AATAAA	-26	NA	27037099	27038960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27037100_27039000
transcript_21028.known	chr12	+	4957	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_7	88.1182637276	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	27237937	True	NA	15	True	AATAAA	-17	NA	27244285	27325959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
transcript_21036.nic	chr12	+	800	7	ISM	ENSG00000211455.8	ENST00000389032.8	4957	14	-45	11276	8	-423	5prime_fragment	FALSE	canonical	3	423	junction_6	24.0901086202062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTGATTATTTTTT	27237892	True	NA	NA	False	AATAAA	-13	NA	27244240	27314683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503
transcript_21037.known	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	30.0854749417245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	27521827	True	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
transcript_21038.known	chr12	+	2805	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	27521843	True	NA	NA	False	GATAAA	-20	NA	27524157	27637319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
transcript_21039.known	chr12	+	875	6	FSM	ENSG00000110841.14	ENST00000535047.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	8.82269800004511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTAGTAGAGTCTCA	27521905	True	NA	NA	False	ATTAAA	-10	NA	27524219	27647977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728
transcript_21042.known	chr12	+	1829	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_4	34.5903136140505	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	27702320	True	NA	NA	False	AATAAA	-17	NA	27710831	27756295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
transcript_21045.known	chr12	+	1715	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	227.640554871539	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	27702323	True	NA	NA	False	AATAAA	-16	NA	27710834	27756294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
transcript_21048.known	chr12	+	466	2	FSM	ENSG00000061794.13	ENST00000542791.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTTTTTTTCCTCA	27702335	True	NA	11	True	TATAAA	-15	NA	27710846	27755537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27710956_27755180
transcript_21049.known	chr12	+	6490	3	FSM	ENSG00000087448.11	ENST00000381271.7	6490	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	18	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTATCTAAGTTCT	27780217	False	NA	18	True	AATAAA	-15	NA	27780232	27803040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27781203_27791707_27791902_27797714
transcript_21051.known	chr12	+	2738	16	FSM	ENSG00000123106.11	ENST00000545336.5	2738	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	54.0441794584147	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187484	True	NA	17	True	AATAAA	-18	NA	28190445	28550166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_2106.known	chr1	-	828	5	FSM	ENSG00000126709.16	ENST00000362020.4	828	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	9.65336728815391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTCCTGCTGTCAAT	-27671400	True	NA	-5	True	AATAAA	-15	NA	27672198	27666065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669232_27669347_27672122
transcript_21064.nnic	chr12	+	1353	13	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	48.4165949511804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAATTTAGAAAAAG	28187464	True	NA	19	True	AAAAAG	-41	NA	28190425	28452527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_28190642_28225794_28225862_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_21066.nic	chr12	+	2522	13	NIC	ENSG00000123106.11	novel	2519	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	47.5587356153771	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187464	True	NA	17	True	AATAAA	-18	NA	28190425	28550166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305780_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_21067.nic	chr12	+	1623	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-30	926	-1	0	multi-exon	FALSE	canonical	3	44	junction_1	34.3713381888004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAAGATGTGTTTGTT	28187464	True	NA	NA	False	GATAAA	-32	NA	28190425	28549240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_21068.nic	chr12	+	2549	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-30	0	-1	0	multi-exon	FALSE	canonical	3	44	junction_1	34.3713381888004	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187464	True	NA	17	True	AATAAA	-18	NA	28190425	28550166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_2107.known	chr1	-	812	5	FSM	ENSG00000126709.16	ENST00000361157.11	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.80409338312195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCTGCTGTCAATCA	-27671394	True	NA	-3	True	AATAAA	-17	NA	27672192	27666063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669244_27669347_27672122
transcript_21072.known	chr12	+	2440	12	FSM	ENSG00000123106.11	ENST00000539107.5	2440	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	49.5668844396927	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187465	True	NA	17	True	AATAAA	-18	NA	28190426	28550166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_21077.known	chr12	+	1301	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-18	97530	-6	-4	5prime_fragment	FALSE	canonical	3	44	junction_1	33.9565899347976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	28187476	True	NA	NA	False	AAAAAG	-33	NA	28190437	28452636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_2108.known	chr1	+	3579	9	FSM	ENSG00000009780.16	ENST00000373954.11	3579	9	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	6.85565460040104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAATTGTTGGATTTTGT	27725543	True	NA	8	True	AATAAA	-18	NA	27725960	27763116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525_27759628_27760494
transcript_21081.nic	chr12	+	2409	11	NIC	ENSG00000123106.11	novel	2519	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	46.0677761564415	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187481	True	NA	17	True	AATAAA	-18	NA	28190442	28550166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_28190642_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_21089.nic	chr12	+	1064	9	NIC	ENSG00000123106.11	novel	2519	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	48.2478950318042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAATTTAGAAAAAG	28187481	True	NA	19	True	AAAAAG	-41	NA	28190442	28452527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_28190642_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_2109.known	chr1	+	2273	8	FSM	ENSG00000009780.16	ENST00000373949.5	2273	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	9.72268544409918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	27725610	True	NA	NA	False	NA	NA	NA	27726027	27761964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_21092.known	chr12	+	3538	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	19.4000937204859	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	29148551	True	NA	NA	False	AATAAA	-18	NA	29149277	29335616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
transcript_21098.known	chr12	-	5033	14	FSM	ENSG00000087502.19	ENST00000360150.9	5033	14	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_4	29.5956977522711	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTCTTTTTAATA	-29376278	True	NA	NA	False	AATAAA	-16	NA	29381172	29337351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349178_29350012_29350069_29356381_29356478_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
transcript_2110.known	chr1	+	1661	7	FSM	ENSG00000009780.16	ENST00000419687.6	1661	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0053407832663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAAAGCAAGGTTGTC	27725578	True	NA	NA	False	NA	NA	NA	27725995	27761473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_21106.nic	chr12	-	1607	13	NIC	ENSG00000087502.19	novel	5033	14	NA	NA	-17	141	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	119.433704297498	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAAAACTAGTCTAGACTT	-29376312	True	NA	-9	True	AATAAA	-15	NA	29381206	29340715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349178_29350012_29350069_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
transcript_21113.known	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	21.8237494868931	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	-30690046	True	NA	-5	True	AATAAA	-21	NA	30695869	30628987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_21114.nic	chr12	-	1430	11	ISM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	37200	0	3080	5prime_fragment	FALSE	canonical	3	168	junction_3	21.0864885649555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGAGGTATTTC	-30690046	True	NA	NA	False	NA	NA	NA	30695869	30666187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_21118.known	chr12	+	16489	5	FSM	ENSG00000285517.1	ENST00000648050.1	16489	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.40254569624358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGCATGCCTAATCTT	30795795	False	NA	NA	False	AATAAA	-25	NA	30795810	30817435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_30796217_30798144_30798316_30799912_30800022_30800533_30800602_30801700
transcript_21119.known	chr12	+	2391	4	FSM	ENSG00000285517.1	ENST00000650193.1	2391	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATTCCCACTTTACC	30795439	False	NA	NA	False	TTTAAA	-27	NA	30795457	30803155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_30796217_30799912_30800022_30800533_30800602_30801700
transcript_21122.nnic	chr12	-	1409	3	FSM	ENSG00000245614.5	ENST00000685910.1	1384	3	-32	7	-13	-6	multi-exon	FALSE	canonical	1	1	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTATTTGATTGTTTAT	-31073612	False	NA	-6	True	AATAAA	-17	NA	31073825	31020768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31021436_31060659_31060771_31073194
transcript_21123.known	chr12	-	494	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	305	11	279	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGGCCACCTATCTTC	-31073294	False	NA	NA	False	ATTAAA	-13	NA	31073507	31060589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31060771_31073194
transcript_21124.known	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	95.1996656053	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	31067649	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_21126.nic	chr12	-	742	7	FSM	ENSG00000177359.21	ENST00000688821.1	750	7	2	6	0	0	multi-exon	FALSE	canonical	2	20	junction_6	23.7726500182224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31119114	31111656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_21127.nnic	chr12	-	782	7	NIC	ENSG00000177359.21	novel	781	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_6	23.1426734266664	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31119084	31111656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31118896
transcript_21128.nnic	chr12	-	766	7	FSM	ENSG00000177359.21	ENST00000542925.6	749	7	-20	3	-18	0	multi-exon	FALSE	canonical	3	27	junction_6	21.5998971190965	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31119134	31111656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31118962
transcript_21129.nnic	chr12	-	827	7	NNC	ENSG00000177359.21	novel	749	7	NA	NA	-2255	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	25.0516133878306	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121371	31111656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31121138
transcript_2113.known	chr1	+	3034	9	FSM	ENSG00000117758.14	ENST00000373943.9	3034	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	8.09224165481976	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTATCTGTGCCTTG	27771571	True	NA	12	True	AATAAA	-14	NA	27773218	27824443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850_27817924_27819649_27819733_27822230
transcript_21132.nnic	chr12	-	1942	6	NIC	ENSG00000177359.21	novel	1209	7	NA	NA	-18	0	intron_retention	TRUE	canonical	3	27	junction_5	22.5955747879978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGACTTTTTTTTCTT	NA	False	NA	1	True	ATTAAA	-21	NA	31119134	31111651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31118962
transcript_21134.nnic	chr12	-	738	6	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-2231	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	26.6563313304738	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121347	31111656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31121138
transcript_21144.nnic	chr12	-	3168	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	439	junction_5	1124.21311987047	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	NA	False	NA	-26	True	AATAAA	-24	NA	31326235	31280583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_21146.nnic	chr12	-	1064	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	439	junction_5	1124.21311987047	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATATCTGA	NA	False	NA	7	True	NA	NA	NA	31326235	31282687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_21148.known	chr12	-	1555	6	FSM	ENSG00000139146.14	ENST00000454658.6	1555	6	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_5	1120.88625649528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCCTCATGATAATAAA	-31305407	False	NA	-49	True	NA	NA	NA	31324162	31282061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31323943
transcript_21150.known	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2602	junction_5	179.216740289516	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	-31307395	True	NA	-26	True	AATAAA	-24	NA	31326150	31280583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
transcript_21155.known	chr12	-	868	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	-31369276	False	NA	-5	True	AATAAA	-17	NA	31369301	31363480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31363796_31368748
transcript_21156.known	chr12	-	1025	9	FSM	ENSG00000151743.11	ENST00000536761.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	48.5540935452409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCTTATCAAAACTAC	-31728110	True	NA	NA	False	NA	NA	NA	31729021	31672277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_21157.known	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	12.5797456254091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	-31728110	True	NA	-3	True	AATAAA	-25	NA	31729021	31671141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
transcript_21162.known	chr12	-	880	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	29.9399398796992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-31728199	True	NA	-76	True	NA	NA	NA	31729110	31672169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
transcript_21169.known	chr12	-	560	5	FSM	ENSG00000151743.11	ENST00000509386.2	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.20156211871642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCCTGAGTAGTTGGG	-31728189	True	NA	NA	False	NA	NA	NA	31729100	31709079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31709168_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_2117.nic	chr1	+	1239	7	ISM	ENSG00000117758.14	ENST00000373943.9	3034	9	-24	6043	-24	326	5prime_fragment	FALSE	canonical	3	76	junction_4	7.49814791946799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTAGTCATATCAGCT	27771547	True	NA	NA	False	ATTAAA	-14	NA	27773194	27818400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850
transcript_21171.known	chr12	+	2055	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	31658993	True	NA	NA	False	TTTAAA	-40	NA	31659186	31668967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
transcript_21173.known	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	36.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	-31728146	True	NA	NA	False	NA	NA	NA	31729057	31708957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31709168_31709292_31709426_31728970
transcript_21174.known	chr12	+	2088	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTTATGTAATTT	NA	False	NA	13	True	AATAAA	-21	NA	31729116	31731204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31729100_31731200
transcript_21175.known	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	92.9122569955116	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	31950925	True	NA	-39	True	NA	NA	NA	31959437	31992941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
transcript_21176.nic	chr12	+	702	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-181	12049	-136	-2	5prime_fragment	FALSE	canonical	3	98	junction_1	15.5848929700813	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCAGAGTTCTTTCAGC	31959137	False	NA	3	True	AATAAA	-15	NA	31959233	31981058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_21177.nnic	chr12	+	1101	4	NIC	ENSG00000174718.12	novel	6234	6	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	53.8970211504206	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	31950871	True	NA	6	True	AATAAA	-23	NA	31959383	31993107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_31959492_31960776_31960872_31970188_31970357_31992377
transcript_21178.known	chr12	+	814	4	FSM	ENSG00000174718.12	ENST00000397578.7	814	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	108.962786715873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTGTTTTATAACTAA	31950936	True	NA	-11	True	AATATA	-3	NA	31959448	31992969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31987238_31987323_31992377
transcript_21179.known	chr12	+	674	3	FSM	ENSG00000174718.12	ENST00000541981.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	47	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGGAGGACCGTTCCT	31950857	True	NA	NA	False	TTTAAA	-39	NA	31959369	31992834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31992377
transcript_2118.known	chr1	+	703	4	FSM	ENSG00000117758.14	ENST00000468761.1	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCATTTTGATATAT	27771607	True	NA	NA	False	AATGAA	-38	NA	27773254	27802039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677
transcript_21181.nic	chr12	+	1565	2	ISM	ENSG00000174718.12	ENST00000540924.5	362	3	-22	18825	16	-8011	5prime_fragment	FALSE	canonical	3	98	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTTGTGAAGGTGAA	31950873	True	NA	NA	False	TTTAAA	-13	NA	31959385	31962235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776
transcript_21182.known	chr12	+	6234	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	64.4409807498303	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	31950902	True	NA	6	True	AATAAA	-23	NA	31959414	31993107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
transcript_21183.known	chr12	+	362	3	FSM	ENSG00000174718.12	ENST00000540924.5	362	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGTTCTTTCAGCTA	31950895	True	NA	5	True	AATAAA	-17	NA	31959407	31981060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31980877
transcript_21184.known	chr12	+	1357	1	FSM	ENSG00000274964.1	ENST00000622688.1	1357	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCTTGTTTTTATTTG	NA	False	NA	11	True	NA	NA	NA	32339367	32340724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32339400_32340700
transcript_21185.known	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_15	68.5729488025652	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	32671579	True	NA	NA	False	NA	NA	NA	32679300	32745650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_21186.known	chr12	+	2393	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	97.485120738665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	32671598	True	NA	-46	True	TATAAA	-40	NA	32679319	32743581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_21188.known	chr12	+	4439	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_14	61.2944975678793	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	32671478	True	NA	NA	False	AATAAA	-26	NA	32679199	32745552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_21189.known	chr12	+	3101	18	FSM	ENSG00000087470.19	ENST00000266481.10	3101	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	94.3955822671649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCATAGCTTCATACCA	32671581	True	NA	NA	False	NA	NA	NA	32679302	32744350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_2119.known	chr1	+	2340	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	6.20259802197613	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	27828415	True	NA	17	True	AATAAA	-24	NA	27830781	27851676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_21197.known	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	23.2486558751253	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-32754276	True	NA	NA	False	NA	NA	NA	32755897	32746543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
transcript_212.known	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_2	11481.5370399612	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
transcript_21200.nnic	chr12	-	1923	4	NIC	ENSG00000139131.13	novel	2117	5	NA	NA	-457	180	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	131.212296171764	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGTTTTATTTTCTGA	NA	False	NA	-11	True	AATAAA	-15	NA	32756354	32747023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_32747364_32750718_32750875_32753917_32754086_32755095
transcript_21204.known	chr12	-	1563	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAATTCCAGGAAGAAA	-32896551	False	NA	NA	False	NA	NA	NA	32896601	32893308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_32894779_32896508
transcript_21205.known	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	10.8282039138539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	-32895234	True	NA	-24	True	AATAAA	-26	NA	32896777	32790754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
transcript_21206.known	chr12	+	2913	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACATATTTTGTGAT	34021417	True	NA	9	True	AATAAA	-24	NA	34022495	34028302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_34022771_34023961_34024160_34025862
transcript_21212.known	chr12	-	3431	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	3.16227766016838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTTGTCAAACATC	-38904846	True	NA	-13	True	AATAAA	-15	NA	38905591	38652202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_21213.nic	chr12	-	925	12	ISM	ENSG00000139117.14	ENST00000331366.10	3431	20	-34	72661	-34	1495	5prime_fragment	FALSE	canonical	3	13	junction_11	2.90624861148105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTAATTCTGGAACAGT	-38904880	True	NA	NA	False	AAAAAG	-19	NA	38905625	38724863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_21214.known	chr12	+	526	2	FSM	ENSG00000257718.1	ENST00000551152.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCTTGCAGTAATTTGT	38906382	False	NA	7	True	AATAAA	-20	NA	38906450	38909592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_38906694_38909309
transcript_21216.known	chr12	-	4096	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATTC	-42238085	True	NA	NA	False	AATAAA	-18	NA	42238248	42157103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
transcript_21225.known	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	156.860890100035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	42320989	True	NA	18	True	AATAAA	-15	NA	42326177	42448618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
transcript_2123.known	chr1	+	2651	7	FSM	ENSG00000117751.18	ENST00000373931.8	2651	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.66826908263056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCTAATGAGAGAATG	27828455	True	NA	13	True	AATAAA	-20	NA	27830821	27851672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27831247_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_21232.known	chr12	+	1693	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	146.49505111095	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	42320956	True	NA	15	True	AATAAA	-15	NA	42326144	42441950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21234.known	chr12	+	1859	10	FSM	ENSG00000134283.18	ENST00000358314.12	1859	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	123.890632772978	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320978	True	NA	NA	False	AATAAA	-34	NA	42326166	42442181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21239.known	chr12	+	1863	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	126.929649028386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320960	True	NA	NA	False	AATAAA	-34	NA	42326148	42442181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21242.known	chr12	+	1095	10	FSM	ENSG00000134283.18	ENST00000552761.5	1095	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	157.029446008003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAAAATTTTTTTTC	42320982	True	NA	50	True	AAAACA	-1	NA	42326170	42441543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21244.known	chr12	+	1583	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	51.7107338953916	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	42320979	True	NA	28	True	AATAAA	-28	NA	42326167	42441963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21249.nic	chr12	+	1485	9	ISM	ENSG00000134283.18	ENST00000337898.10	1465	11	13	3483	0	0	5prime_fragment	FALSE	canonical	3	92	junction_4	143.144813039104	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	42320969	True	NA	28	True	AATAAA	-28	NA	42326157	42441963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_2125.known	chr1	+	2713	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	14.1336477952438	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	27870608	True	NA	18	True	AATAAA	-22	NA	27872543	27886675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
transcript_21251.nic	chr12	+	1498	9	ISM	ENSG00000134283.18	ENST00000317560.13	1359	10	-43	17752	-14	0	5prime_fragment	FALSE	canonical	3	87	junction_2	146.356585092711	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	42320942	True	NA	28	True	AATAAA	-28	NA	42326130	42441963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21255.nic	chr12	+	1658	8	NIC	ENSG00000134283.18	novel	1583	9	NA	NA	-217	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_2	96.2479790405375	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	NA	False	NA	28	True	AATAAA	-28	NA	42325927	42441963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_2126.known	chr1	+	1650	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	30.4661697625415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	27870608	True	NA	28	True	AATAAA	-32	NA	27872543	27886685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
transcript_21264.known	chr12	+	770	5	FSM	ENSG00000134283.18	ENST00000550535.5	770	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	133.754439178668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGATTTAATGCATT	42320992	True	NA	NA	False	NA	NA	NA	42326180	42359658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42359256
transcript_21268.known	chr12	+	847	4	FSM	ENSG00000134283.18	ENST00000549774.5	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	5.90668171555645	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	42320969	True	NA	-59	True	NA	NA	NA	42326157	42355678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160
transcript_2127.known	chr1	+	1082	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	32.1489588564786	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	27870613	True	NA	NA	False	NA	NA	NA	27872548	27886533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
transcript_21272.known	chr12	-	1808	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	21.8108753999991	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATCTTGTGTTTCC	-42321225	True	NA	NA	False	ATTAAA	-19	NA	42326094	42312085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_21273.known	chr12	-	1199	8	FSM	ENSG00000139168.9	ENST00000552235.2	1199	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	195.462820724849	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTTTAAATATGG	-42321278	True	NA	-15	True	AATAAA	-12	NA	42326147	42312780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42313232_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_21274.known	chr12	-	13567	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	7.44878345771979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-43756903	True	NA	42	True	AATAAA	-15	NA	43758790	43718991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
transcript_21279.known	chr12	-	1873	8	FSM	ENSG00000129317.15	ENST00000431332.7	1873	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	16.4142794976987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTTGACCATTTGTAA	-43756906	True	NA	NA	False	AATACA	-37	NA	43758793	43729762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43758729
transcript_21280.known	chr12	-	3313	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	15.039531242695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAAGCTATATG	-43756886	True	NA	NA	False	AATAAA	-9	NA	43758773	43729257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
transcript_21282.known	chr12	+	1684	13	FSM	ENSG00000198001.15	ENST00000551736.5	1684	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.69346817380089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTAGTATCACCCCCA	43758486	True	NA	NA	False	TATAAA	-31	NA	43758960	43786903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_43759017_43760924_43760973_43768102_43768273_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_21285.known	chr12	+	1348	11	FSM	ENSG00000198001.15	ENST00000550615.5	1348	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.93632883186233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATCTCAACCATTTTT	43758475	True	NA	NA	False	NA	NA	NA	43758949	43786750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_43759017_43768102_43768273_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_21288.known	chr12	-	1170	10	FSM	ENSG00000151239.14	ENST00000548315.5	1170	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.56133652658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAATTGTACTTTTT	-43804282	True	NA	NA	False	TATAAA	-5	NA	43806249	43795492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43798564_43798586_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_21291.known	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	27.4806750280993	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	-43804350	True	NA	-1	True	AATAAA	-17	NA	43806317	43793722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_21293.known	chr12	-	455	2	FSM	ENSG00000151239.14	ENST00000547961.1	455	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTGTGAATTATTCAA	-43804288	True	NA	NA	False	ACTAAA	-27	NA	43806255	43804152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43804573_43806220
transcript_21294.known	chr12	-	3196	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_20	38.3685743806048	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACATGTGAGTCTGAG	-44873391	True	NA	-12	True	AATAAA	-16	NA	44876355	44508281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
transcript_21295.known	chr12	-	3553	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	26.1662064524226	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGAGTCTGAGTATC	-44873351	True	NA	-8	True	AATAAA	-20	NA	44876315	44508277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_21300.known	chr12	+	3761	20	FSM	ENSG00000177119.17	ENST00000681156.1	3761	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	83.0811771369414	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGAGCATTTTAATAAA	45210908	True	NA	-19	True	NA	NA	NA	45216149	45432312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45431249
transcript_21301.known	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	11	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	-45215073	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45174643_45176240_45176434_45215939
transcript_21302.nic	chr12	+	3706	3	ISM	ENSG00000189079.17	ENST00000427628.5	323	4	-185	21418	-18	-21418	5prime_fragment	FALSE	canonical	3	68	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGGCTTAGGGAACAT	45727553	True	NA	NA	False	ATTAAA	-19	NA	45729687	45734587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_45729929_45730043_45730138_45731216
transcript_21303.nic	chr12	-	3324	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-96	7585	-86	0	5prime_fragment	FALSE	canonical	3	226	junction_2	29.6877078940089	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	-45990539	False	NA	NA	False	AATGAA	-4	NA	45990670	45926715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_21307.known	chr12	-	1931	4	FSM	ENSG00000139218.18	ENST00000395454.6	1931	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	140.98778512891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGCACGGTGATACATG	-45985357	True	NA	NA	False	AAAAAG	-25	NA	45990584	45954733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45956193_45961699_45961858_45964106_45964189_45990352
transcript_21308.known	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	112.241802472262	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-45985353	True	NA	-8	True	AATAAA	-20	NA	45990580	45960454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
transcript_2131.known	chr1	-	1584	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_5	48.6441157798145	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-27909354	True	NA	0	True	AATAAA	-29	NA	27914575	27891523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_21310.nic	chr12	-	1910	2	ISM	ENSG00000139218.18	ENST00000266589.10	2084	6	-53	25561	-34	-12684	5prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGACTTGCTTTAT	-45990487	False	NA	NA	False	TATAAA	-24	NA	45990618	45974090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_45975735_45990352
transcript_21311.known	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_2	65.9545297913646	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-45985347	True	NA	NA	False	AATAAA	-18	NA	45990574	45919130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_21316.nnic	chr12	-	2915	17	NNC	ENSG00000111371.16	novel	3436	18	NA	NA	278	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_16	144.779951564434	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	-46268511	False	NA	6	True	NA	NA	NA	46268528	46187800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268454
transcript_21317.known	chr12	-	8097	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_16	103.632444696388	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGTGTTTGT	-46269026	False	NA	-11	True	ATTAAA	-19	NA	46269043	46183062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
transcript_2132.known	chr1	-	1162	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	235.011036974862	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-27914094	False	NA	NA	False	NA	NA	NA	27914746	27891923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
transcript_21328.known	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	587	junction_14	74.2872502893703	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	-46346607	True	NA	-16	True	AATAAA	-18	NA	46372773	46358187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
transcript_21335.nnic	chr12	+	568	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	-3	157374	combination_of_known_splicesites	FALSE	canonical	2	25	junction_3	12.684198393627	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	46382040	True	NA	7	True	AATAAA	-18	NA	46383669	46652577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_46383714_46387746_46387973_46470152_46470263_46652389
transcript_21338.nnic	chr12	+	588	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	-3	157347	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	22.1560124771785	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAATAAAGCTGATATTT	46382040	True	NA	-20	True	NA	NA	NA	46383669	46652550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_46383714_46387746_46387973_46571255_46571413_46652389
transcript_21339.nnic	chr12	-	3842	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	6.15142259969188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46831954	True	NA	-26	True	AATAAA	-18	NA	46832472	46764760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
transcript_21342.known	chr12	-	3791	16	FSM	ENSG00000139209.16	ENST00000447411.5	3791	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0246879560243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46825479	False	NA	-26	True	AATAAA	-18	NA	46825997	46764760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46825902
transcript_21344.known	chr12	+	476	3	FSM	ENSG00000179715.13	ENST00000551777.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTGGTGGACGGAGGC	47223509	True	NA	NA	False	NA	NA	NA	47223544	47235238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47223673_47223923_47224040_47235006
transcript_21345.known	chr12	+	732	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGAAGTCACCGGGG	47223482	False	NA	NA	False	NA	NA	NA	47223500	47235566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47223673_47235006
transcript_21349.known	chr12	-	4339	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	34.5316317852198	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGTATACAACCTATTG	-47700747	True	NA	NA	False	AATAAA	-21	NA	47706030	47661248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_21352.known	chr12	-	2149	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	84.4401168481743	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATTTGTAAGGATCAG	-47700703	True	NA	-21	True	AATAAA	-15	NA	47705986	47663292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_21357.nic	chr12	-	1042	4	Fusion	ENSG00000005175.10_ENSG00000276390.1	novel	420	3	NA	NA	-27	-128	multi-exon	FALSE	canonical	3	34	junction_1	156.312365331587	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGCTGGGACTTTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	47706057	47699528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_21358.nic	chr12	-	891	4	Fusion	ENSG00000005175.10_ENSG00000276390.1	novel	420	3	NA	NA	-27	-279	multi-exon	FALSE	canonical	3	34	junction_1	156.312365331587	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTGTCTTTTGGTG	NA	False	NA	-3	True	AATAAA	-16	NA	47706057	47699679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_21359.known	chr12	-	621	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTTATCCAGTGTG	-47700716	True	NA	NA	False	NA	NA	NA	47705999	47701190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_47701605_47702687_47702847_47705951
transcript_21362.known	chr12	+	579	4	FSM	ENSG00000257433.7	ENST00000692059.1	1311	4	70	662	4	-1	multi-exon	FALSE	canonical	1	2	junction_2	5.65685424949238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTGATTTCTTTC	47706037	True	NA	NA	False	NA	NA	NA	47706127	47729203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47706164_47719146_47719273_47719599_47719700_47728886
transcript_21363.known	chr12	+	457	1	FSM	ENSG00000257433.7	ENST00000621159.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCTCTGAGTCTTTCTT	47706003	True	NA	NA	False	AGTAAA	-18	NA	47706093	47706550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47706100_47706600
transcript_21364.known	chr12	+	848	4	FSM	ENSG00000257433.7	ENST00000667854.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTTTATCATTTTAC	47705994	True	NA	NA	False	ACTAAA	-2	NA	47706084	47720447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47706168_47719151_47719273_47719604_47719700_47719898
transcript_21365.known	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	118.573321843749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	47957741	True	NA	-12	True	NA	NA	NA	47963634	47968849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_21367.known	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	104.251657844206	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	47957702	True	NA	17	True	AATAAA	-17	NA	47963595	47968878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_21380.nic	chr12	+	1061	3	NIC	ENSG00000134291.12	novel	1539	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	70	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	47957711	True	NA	17	True	AATAAA	-17	NA	47963604	47968878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_47963705_47964208_47964424_47968132
transcript_21381.known	chr12	-	747	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCTTCCAAGACAC	-48003346	True	NA	NA	False	NA	NA	NA	48004554	47999696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48000126_48004236
transcript_21382.known	chr12	+	3090	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.734017393535	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48114607	True	NA	21	True	AATAAA	-15	NA	48119363	48146404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_21384.nic	chr12	+	2761	22	NIC	ENSG00000152556.17	novel	3063	22	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	146.144711310368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114543	True	NA	19	True	AATAAA	-19	NA	48119299	48146104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_21385.known	chr12	+	3063	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.937166914643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114586	True	NA	19	True	AATAAA	-19	NA	48119342	48146104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_21389.known	chr12	-	4456	18	FSM	ENSG00000079387.14	ENST00000549518.6	4456	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	28.2243851475106	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTCTCCTGTGTCCAC	-48105947	False	NA	NA	False	ACTAAA	-23	NA	48106079	48042896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48106027
transcript_21390.nic	chr12	+	1138	9	ISM	ENSG00000152556.17	ENST00000546964.5	3063	22	-43	10886	-27	389	5prime_fragment	FALSE	canonical	0	0	junction_1	146.766821863799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTCTCTGCTTGTTTT	48114543	True	NA	3	True	NA	NA	NA	48119299	48135218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942
transcript_21394.known	chr12	-	2610	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.3431330181157	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-48156828	False	NA	1	True	AATAAA	-16	NA	48157595	48147788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
transcript_21395.known	chr12	+	2283	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	48183592	True	NA	5	True	AATAAA	-19	NA	48183643	48185926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48183600_48185900
transcript_21400.nic	chr12	-	2353	12	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	103.687865990766	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678587	True	NA	0	True	AAGAAA	-40	NA	48682265	48653401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559_48662655_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_21405.nic	chr12	-	2238	11	NIC	ENSG00000139620.13	novel	1881	9	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.640766434502	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678587	True	NA	0	True	AAGAAA	-40	NA	48682265	48653401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559_48662655_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48682186
transcript_21411.nic	chr12	-	2411	11	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	95.179251940746	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678581	True	NA	0	True	AAGAAA	-40	NA	48682259	48653401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857_48682066_48682186
transcript_2142.known	chr1	+	1866	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	17.0281879151444	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	27930049	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_21421.known	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	77.0648276084556	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	-48678560	True	NA	65	True	ATTAAA	-17	NA	48682238	48653210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_21426.nic	chr12	-	2107	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	92.4483172265709	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678587	True	NA	0	True	AAGAAA	-40	NA	48682265	48653401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_21429.nic	chr12	-	2094	9	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	92.4830220905437	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678587	True	NA	0	True	AAGAAA	-40	NA	48682265	48653401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48682186
transcript_21435.known	chr12	-	468	2	FSM	ENSG00000139620.13	ENST00000548254.1	468	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTTGAGTTGGATTAC	-48678558	True	NA	NA	False	NA	NA	NA	48682236	48681223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48681642_48682186
transcript_21436.known	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_3	6.05056815514047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	-48713336	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_21438.known	chr12	-	2017	8	FSM	ENSG00000129315.11	ENST00000417344.2	2017	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.586238884201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAGAGGAG	-48716664	False	NA	NA	False	NA	NA	NA	48716675	48693032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_2144.known	chr1	+	1548	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	16.2420920929404	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCTTCCCACAGTCT	27930088	True	NA	26	True	GATAAA	-23	NA	27935038	27956480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
transcript_21440.known	chr12	-	6915	8	FSM	ENSG00000129315.11	ENST00000618666.4	6915	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.586238884201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	NA	False	NA	0	True	AATAAA	-21	NA	48716998	48688457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_21441.known	chr12	+	473	3	FSM	ENSG00000257660.5	ENST00000549864.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	48789562	False	NA	NA	False	AATAAA	-23	NA	48789575	48790535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48789691_48789984_48790120_48790312
transcript_21442.nic	chr12	+	839	2	ISM	ENSG00000257660.5	ENST00000547774.5	439	3	357	0	-72	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	48789490	True	NA	NA	False	AATAAA	-23	NA	48789503	48790535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_48790120_48790312
transcript_21445.known	chr12	-	3256	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	24.0083806982062	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAGTTCTAGTTAAACT	-48847414	True	NA	-5	True	AATAAA	-23	NA	48852163	48829755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_21446.known	chr12	-	1653	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	5.7662812973354	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCGTATTTTTTTC	-48864607	True	NA	-11	True	TATAAA	-4	NA	48865870	48857144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
transcript_21454.known	chr12	-	959	6	FSM	ENSG00000134285.11	ENST00000453172.2	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	162.593234791611	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCTGGAGTGCAATAG	-48920994	True	NA	53	True	NA	NA	NA	48925520	48923125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48923605_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_21455.known	chr12	-	691	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	64.1417180936089	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGCATTCTTCATCT	-48920966	True	NA	-16	True	AATAAA	-18	NA	48925492	48921962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_21456.known	chr12	-	1052	6	FSM	ENSG00000134285.11	ENST00000552878.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	202.287913628076	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGACTCTATCCGTGTG	-48920985	True	NA	-8	True	TTTAAA	-32	NA	48925511	48922564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48923146_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_21467.known	chr12	-	939	5	FSM	ENSG00000272822.2	ENST00000398092.4	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	422.082041788086	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCAAAGCCATCGTGGAAAA	-48923580	True	NA	NA	False	NA	NA	NA	48957365	48903502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48903909_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_21473.known	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	206.246212086428	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48924957	False	4526	-12	True	AATAAA	-22	NA	48924967	48921958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
transcript_21477.known	chr12	-	4041	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	55.312747174589	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGTGTAATGACCTTA	-48923702	True	NA	-36	True	AATAAA	-18	NA	48957487	48935722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_21479.known	chr12	-	2661	4	FSM	ENSG00000134285.11	ENST00000551694.5	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	38.4736562107401	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATTCTTCATCTGA	-48920984	True	NA	-14	True	AATAAA	-20	NA	48925510	48921960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48924257_48924560_48924649_48925045_48925112_48925299
transcript_21485.known	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	417.172492967704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-48923692	True	NA	-57	True	NA	NA	NA	48957477	48938553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
transcript_21492.known	chr12	-	1497	12	FSM	ENSG00000181929.13	ENST00000552212.5	1497	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	102.316313944422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGACAAATTCTGAT	-49015350	True	NA	NA	False	NA	NA	NA	49018748	49002613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018523
transcript_21493.known	chr12	-	1657	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_11	36.4974809500941	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	-49015378	True	NA	-2	True	ATTAAA	-21	NA	49018776	49002273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_21496.known	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	103.774549022356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-49015389	True	NA	-2	True	NA	NA	NA	49018787	49002311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
transcript_21498.known	chr12	-	1683	12	FSM	ENSG00000181929.13	ENST00000316299.9	1683	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	104.87166498012	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-49015381	True	NA	-6	True	ATTAAA	-17	NA	49018779	49002277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005392_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_215.known	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	17716	junction_3	6509.94062099562	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
transcript_21500.known	chr12	-	1531	11	FSM	ENSG00000181929.13	ENST00000547306.5	1531	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	104.723254342099	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-49015366	True	NA	-6	True	ATTAAA	-17	NA	49018764	49002277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49013061_49013111_49018731
transcript_21510.known	chr12	-	553	2	FSM	ENSG00000181929.13	ENST00000552657.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAGCTCAGGAGTTTG	-49015388	True	NA	NA	False	NA	NA	NA	49018786	49012612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49013111_49018731
transcript_21513.nic	chr12	-	1236	8	NIC	ENSG00000167550.11	novel	1173	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	26.4505699950157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	-49069414	True	NA	-13	True	AATAAA	-13	NA	49070040	49064685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066955_49067036_49069034_49069107_49069733
transcript_21514.known	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	8.0609919883805	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-49069353	True	NA	-3	True	AATAAA	-23	NA	49069979	49064675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
transcript_21515.known	chr12	-	1261	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	25.7206341369758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	-49069399	True	NA	-29	True	AATAGA	-36	NA	49070025	49064701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
transcript_21516.known	chr12	-	1063	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	23.7024377555465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	-49069321	True	NA	-13	True	AATAAA	-13	NA	49069947	49064685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
transcript_21524.known	chr12	-	2235	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	21.1917399887315	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACCTGTCTCTGTGTA	-49108669	True	NA	-8	True	AATAAA	-30	NA	49110850	49097141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_21527.known	chr12	-	2295	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.159744035135	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	-49108666	True	NA	-5	True	AATAAA	-33	NA	49110847	49097138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_2153.known	chr1	+	2178	3	FSM	ENSG00000158156.9	ENST00000373884.6	2178	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	17.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	27959115	True	NA	14	True	AATAAA	-17	NA	27959972	27968093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27960363_27963496_27963694_27966502
transcript_2154.known	chr1	+	1878	3	FSM	ENSG00000158156.9	ENST00000675759.1	1878	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	NA	False	NA	14	True	AATAAA	-17	NA	27959650	27968093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27959741_27963496_27963694_27966502
transcript_21545.known	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_3	913.41350013136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	-49188865	False	NA	NA	False	NA	NA	NA	49188899	49184958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
transcript_21546.known	chr12	-	1672	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_1	403.893000131911	4963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTGTGTTTTCTAT	-49164136	True	NA	NA	False	AATAAA	-22	NA	49189080	49184794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
transcript_21548.known	chr12	-	984	3	FSM	ENSG00000167552.15	ENST00000546918.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_1	489.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGACCTGACAGAATTC	-49164122	True	NA	NA	False	NA	NA	NA	49189066	49185620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186834_49188976
transcript_21549.known	chr12	+	319	2	FSM	ENSG00000258017.3	ENST00000551496.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTTTTTTCCTATTTT	49131635	False	NA	NA	False	AATGAA	-20	NA	49131709	49147865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49131826_49147662
transcript_2155.nic	chr1	-	1761	16	ISM	ENSG00000158161.16	ENST00000373871.8	5999	18	-10	18135	-10	0	5prime_fragment	FALSE	canonical	3	24	junction_9	20.9522207786085	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	-28086152	True	NA	-17	True	AATAAA	-14	NA	28088620	27988478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_21550.known	chr12	-	1627	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	8627	junction_1	801.186342591757	27058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTCCTGCGTTTTT	-48914974	True	NA	-8	True	AGTAAA	-17	NA	49131395	49127781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
transcript_21551.known	chr12	-	3198	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	8627	junction_1	432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTGTTTCCTGCGT	-48914974	True	NA	-12	True	AGTAAA	-13	NA	49131395	49127785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49128939_49129241_49129391_49129499
transcript_21552.known	chr12	-	1802	4	FSM	ENSG00000167552.15	ENST00000679733.1	1802	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1314.51917698703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATTTAAAGTATCTTA	-49164134	True	NA	NA	False	AATAAA	-45	NA	49189078	49184685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186587_49186834_49188976
transcript_21553.known	chr12	+	2823	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	115.276479243021	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	49223101	True	NA	7	True	AATAAA	-16	NA	49265081	49274600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
transcript_21554.known	chr12	-	1777	5	FSM	ENSG00000167552.15	ENST00000550767.6	1777	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1255.59614824991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-49164122	True	NA	NA	False	AATGAA	-25	NA	49189066	49184770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49186989_49187085_49188976
transcript_21556.known	chr12	+	2551	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	85.4582186969582	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	49317693	True	NA	13	True	AATAAA	-13	NA	49323254	49331731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
transcript_21563.nnic	chr12	+	544	4	NIC	ENSG00000135451.13	novel	623	4	NA	NA	-37	7	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	185.293161113829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTTCTTCTGAAGCCT	49317637	True	NA	7	True	AATAAA	-20	NA	49323198	49324372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_49323350_49323603_49323753_49323844_49323947_49324230
transcript_21564.known	chr12	+	675	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	173.155678188412	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	49317693	True	NA	27	True	AATAAA	-40	NA	49323254	49324392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
transcript_21565.nnic	chr12	+	659	4	NIC	ENSG00000135451.13	novel	675	4	NA	NA	-37	-3	combination_of_known_splicesites	FALSE	canonical	3	64	junction_3	159.63917647829	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGAAGCCTTTTCC	49317637	True	NA	12	True	AATAAA	-25	NA	49323198	49324377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49324211
transcript_21566.known	chr12	+	623	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	145.222434752884	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	49317693	True	NA	51	True	AATAAA	-45	NA	49323254	49324416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
transcript_21567.known	chr12	+	778	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	30.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	49317695	True	NA	15	True	AATAAA	-28	NA	49323256	49324380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844
transcript_21568.known	chr12	+	348	3	FSM	ENSG00000135451.13	ENST00000549275.5	348	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	210	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTGGAGACCAGCCTG	49317674	True	NA	-69	True	NA	NA	NA	49323235	49324296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49324211
transcript_2157.nic	chr1	-	1623	15	ISM	ENSG00000158161.16	ENST00000373863.3	1729	17	-56	11206	-10	0	5prime_fragment	FALSE	canonical	3	58	junction_13	12.050277327658	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	-28086152	True	NA	-17	True	AATAAA	-14	NA	28088620	27988478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_21571.known	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	44.7993554476034	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	49363621	True	NA	17	True	AATAAA	-27	NA	49367461	49527425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_21573.known	chr12	+	3158	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	27.7503753728366	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	49363634	True	NA	11	True	AATAAA	-21	NA	49367474	49527419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_21581.known	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	69.9336420166595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	49366756	True	NA	10	True	AAAAAG	-18	NA	49366904	49526365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_21582.known	chr12	+	1061	5	FSM	ENSG00000123352.18	ENST00000549375.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	35.4356811702555	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGACCTTGAAACATA	49363621	True	NA	NA	False	NA	NA	NA	49367461	49491159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_21587.known	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	223.112487822224	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	-49561984	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
transcript_2159.known	chr1	-	681	1	FSM	ENSG00000228589.3	ENST00000436160.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTCTAAAAGTAGCCCT	-28096394	False	NA	NA	False	AATAAA	-5	NA	28096422	28095741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28095700_28096400
transcript_21590.nic	chr12	-	2076	15	ISM	ENSG00000187778.14	ENST00000550165.5	1936	16	219	-61	-9	0	3prime_fragment	FALSE	canonical	3	70	junction_14	168.765142933568	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49561765	False	NA	-9	True	AATAAA	-18	NA	49567882	49558301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
transcript_21593.known	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_5	59.1494561535887	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-49562025	True	NA	-6	True	AATAAA	-21	NA	49568142	49558298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
transcript_21596.nic	chr12	-	1815	14	NIC	ENSG00000187778.14	novel	1938	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_13	186.268464395888	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49562025	True	NA	-9	True	AATAAA	-18	NA	49568142	49558301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
transcript_2160.known	chr1	-	1539	2	FSM	ENSG00000169403.12	ENST00000305392.3	1539	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTCTCCCCGATGGGG	-28193781	True	NA	NA	False	TTTAAA	-4	NA	28193873	28149672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28151060_28193721
transcript_21600.known	chr12	-	1666	13	FSM	ENSG00000187778.14	ENST00000548602.5	1666	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	197.128183762072	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-49562014	True	NA	-8	True	AATAAA	-19	NA	49568131	49558300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
transcript_21604.known	chr12	+	3182	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_2	31.9087699543558	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	49623230	True	NA	13	True	TTTAAA	-20	NA	49623560	49644665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_21609.known	chr12	+	2771	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1216.56955822509	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACACCTA	49706666	True	NA	64	True	ATTAAA	-14	NA	49741573	49764726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_2162.known	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	1019.781797043	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	-28209836	True	NA	23	True	AATAAA	-12	NA	28233025	28200558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
transcript_21622.known	chr12	+	2837	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	2671	junction_1	220.325012450042	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	49706649	True	NA	19	True	AATAAA	-19	NA	49741556	49764934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_21623.known	chr12	+	1994	2	FSM	ENSG00000258057.6	ENST00000653240.1	1994	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAATAAAACTCCATGT	49828423	True	NA	NA	False	AAAAAG	-32	NA	49828550	49830730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49828749_49828934
transcript_21624.known	chr12	-	3226	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGATTTC	-49842697	True	NA	-4	True	AATAAA	-17	NA	49843106	49836042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49839016_49842853
transcript_21626.known	chr12	-	4667	12	FSM	ENSG00000135472.9	ENST00000320634.8	4667	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.574959574576069	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTCCCTCGTCTGCCG	-49903885	True	NA	NA	False	AATAAA	-19	NA	49903900	49866895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49889480_49889569_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897584_49897986_49898091_49901129_49901326_49903777
transcript_21634.known	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_16	55.4199873691794	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-50017553	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_21635.nnic	chr12	-	3089	17	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	66.9302050179887	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-50017605	True	NA	NA	False	AGTAAA	-19	NA	50025452	49989161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025372
transcript_21636.known	chr12	-	3106	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_16	39.8245664602893	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-50017647	True	NA	NA	False	AGTAAA	-19	NA	50025494	49989161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_21639.nic	chr12	-	1994	16	NIC	ENSG00000161800.13	novel	932	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	84.3085339030925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCACTGAATCTCAAATC	-50017619	True	NA	NA	False	ATTAAA	-27	NA	50025466	49976922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49977060_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_2165.known	chr1	-	1763	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	0	0	0	multi-exon	FALSE	canonical	3	2188	junction_2	233.390465475777	2267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-28209840	True	NA	NA	False	ATTAAA	-18	NA	28233029	28200277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_21650.known	chr12	+	3283	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_4	41.9367082637634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	50064656	True	NA	21	True	NA	NA	NA	50085341	50100707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_21654.known	chr12	+	3237	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	114.054286045239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50064514	True	NA	13	True	AATAAA	-14	NA	50085199	50100642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
transcript_21655.known	chr12	+	2887	8	FSM	ENSG00000167588.13	ENST00000301149.8	2887	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	2.24971653543195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGAGTTGGGAGAGGG	50103993	True	NA	NA	False	AATAAA	-19	NA	50104007	50111313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50104092_50104573_50104752_50105547_50105689_50106287_50106427_50106804_50106918_50107566_50107801_50108023_50108131_50109422
transcript_21662.known	chr12	-	2132	11	FSM	ENSG00000139624.14	ENST00000547787.5	2132	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	173.862589420496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	-50161992	True	NA	-6	True	ATTAAA	-14	NA	50167303	50129798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
transcript_21665.known	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_9	58.2103465411815	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-50162058	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_21672.known	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	50107251	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112302_50120035
transcript_21673.known	chr12	+	677	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	50107252	True	NA	13	True	ATTAAA	-13	NA	50112236	50120451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112498_50120035
transcript_21674.known	chr12	+	698	2	FSM	ENSG00000272368.2	ENST00000548468.2	698	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACACAAGATTTTGAAA	50107212	True	NA	NA	False	AATAAA	-21	NA	50112196	50165618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112302_50165025
transcript_21675.known	chr12	-	3669	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	68.5026276868267	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	-50282728	True	NA	-6	True	AATAAA	-21	NA	50283506	50175787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_21677.known	chr12	-	2162	8	FSM	ENSG00000050405.14	ENST00000552909.5	2162	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.1682190390415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATACTAGAGATAAC	-50218838	False	NA	NA	False	AAAACA	-25	NA	50222356	50176884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50178070_50181903_50182035_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_21682.known	chr12	+	2853	16	FSM	ENSG00000161813.23	ENST00000518444.5	2853	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	74.6599401732058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	50390457	True	NA	22	True	AGTAAA	-22	NA	50400928	50476463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427764_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_21688.known	chr12	+	1949	15	NNC	ENSG00000161813.23	novel	6296	15	NA	NA	-1	-494	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	122.197982547894	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAGAAAGTACGTCC	50390435	True	NA	NA	False	NA	NA	NA	50400906	50475962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441596_50441597_50441644_50454313_50454418_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_21689.known	chr12	+	6296	15	FSM	ENSG00000161813.23	ENST00000293618.12	6296	15	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_10	85.0247562988185	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCAGGACTGGTTTCC	NA	False	NA	4	True	AATAAA	-7	NA	50400808	50479996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_21690.known	chr12	+	3621	15	FSM	ENSG00000161813.23	ENST00000347328.9	3621	15	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	77.2069839285731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGTAAATGGTGGTT	50390513	False	NA	NA	False	AGTAAA	-20	NA	50400984	50477497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_21697.known	chr12	+	1578	12	FSM	ENSG00000161813.23	ENST00000518561.5	1578	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	101.899642737758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50390484	True	NA	NA	False	AATAAA	-17	NA	50400955	50461487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_217.known	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12415.5112751035	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
transcript_21702.nnic	chr12	+	1887	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	0	1156	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	99.6094373039021	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	50390385	True	NA	9	True	AATAAA	-17	NA	50400856	50456118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_21704.known	chr12	+	1577	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	54.0281408156897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50390436	True	NA	NA	False	AATAAA	-17	NA	50400907	50461487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_21706.nnic	chr12	+	1788	11	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	214	1156	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	116.30030094544	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	50400049	True	NA	9	True	AATAAA	-17	NA	50401406	50456118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_21708.nnic	chr12	+	1529	11	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	214	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	85.006117426924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50400049	True	NA	NA	False	AATAAA	-17	NA	50401406	50461487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_21720.known	chr12	+	2412	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_3	9.20899318902754	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	50762527	True	NA	44	True	AATATA	-23	NA	50764100	50821162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_21734.nnic	chr12	+	2060	3	NNC	ENSG00000185432.12	novel	4076	3	NA	NA	-272	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGGTTTATATCTTT	50921924	True	NA	26	True	AATAAA	-22	NA	50924710	50932504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50925537_50929913_50930221_50931577
transcript_21736.nnic	chr12	+	2305	3	NNC	ENSG00000185432.12	novel	4076	3	NA	NA	-337	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATATGGTTTATATCT	50924481	False	NA	24	True	AATAAA	-20	NA	50924645	50932502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50925537_50929913_50930407_50931581
transcript_21739.known	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	83.0405745658197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	-51022634	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_21740.known	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	67.5233466569156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-51022650	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_21741.known	chr12	-	2486	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	68.088063381183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAAGAGCTTTAATAT	-51022604	True	NA	-15	True	ATTAAA	-15	NA	51026338	50981008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_21746.known	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_8	57.0908048638307	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-51022650	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_21747.nic	chr12	-	4137	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-56	4983	-1	0	5prime_fragment	FALSE	canonical	1	86	junction_8	57.8594465541761	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-51022660	True	NA	0	True	ATTAAA	-20	NA	51026394	50985991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_21750.known	chr12	+	2106	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8714282798358	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	51045118	True	NA	21	True	AGTAAA	-30	NA	51048326	51060424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_21751.known	chr12	+	1389	9	FSM	ENSG00000050426.16	ENST00000550929.5	1389	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	28.4953395312286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTACTTACATCTGTG	51045109	True	NA	NA	False	NA	NA	NA	51048317	51059805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048372_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_21753.known	chr12	+	2001	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.2808522220107	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	51045092	True	NA	6	True	AGTAAA	-15	NA	51048300	51060409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_21754.nic	chr12	+	1990	8	NIC	ENSG00000050426.16	novel	2001	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	26.3516254387714	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045081	True	NA	18	True	AGTAAA	-27	NA	51048289	51060421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048479_51049033_51049186_51053811_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_21761.known	chr12	+	1665	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	34.5056517109879	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	51045132	True	NA	-34	True	NA	NA	NA	51048340	51060369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
transcript_21769.known	chr12	+	1713	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	31.7704265001274	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	51045137	True	NA	-2	True	AGTAAA	-7	NA	51048345	51060401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_21771.known	chr12	+	1566	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.2315048275574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	51045135	True	NA	-40	True	NA	NA	NA	51048343	51060363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
transcript_21772.known	chr12	+	1480	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	33.0340733183179	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	51045135	True	NA	NA	False	NA	NA	NA	51048343	51060303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_21775.nic	chr12	+	1511	5	NIC	ENSG00000050426.16	novel	850	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	40.8564560381833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045115	True	NA	18	True	AGTAAA	-27	NA	51048323	51060421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048372_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_21778.nic	chr12	+	1555	4	NIC	ENSG00000050426.16	novel	1566	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	30.9443945740671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045081	True	NA	18	True	AGTAAA	-27	NA	51048289	51060421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048479_51049033_51049186_51056349_51056503_51059360
transcript_21781.nnic	chr12	+	1356	4	NIC	ENSG00000050426.16	novel	601	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	42.7629122799964	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045118	True	NA	18	True	AGTAAA	-27	NA	51048326	51060421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048372_51056349_51056503_51058031_51058129_51059360
transcript_21783.known	chr12	+	563	4	FSM	ENSG00000050426.16	ENST00000549686.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	40.9254063985795	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGCAGAGAGAGGAGC	51045129	True	NA	NA	False	NA	NA	NA	51048337	51059532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51056349_51056503_51058031_51058129_51059360
transcript_21788.known	chr12	-	3807	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_14	31.52517620401	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTAGTGAATGATTA	-51170666	True	NA	96	True	TTTAAA	-35	NA	51173135	51093655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_21793.known	chr12	-	1862	14	FSM	ENSG00000135457.11	ENST00000548115.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	84.4018284106053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTGCTCCTTCCTTC	-51170443	False	NA	NA	False	NA	NA	NA	51172912	51095221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_21799.known	chr12	+	872	4	FSM	ENSG00000183283.16	ENST00000549555.5	872	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	172.929658146504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAGTTGCCAAATTAT	51234823	True	NA	NA	False	AATAAA	-41	NA	51238823	51242816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241040_51242329
transcript_21800.known	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	2	251	junction_1	71.0226880807973	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	51234825	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
transcript_21801.known	chr12	+	1117	4	FSM	ENSG00000183283.16	ENST00000425012.6	1117	4	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_3	149.127089721784	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTGGAGTTGGCT	51234825	True	NA	NA	False	NA	NA	NA	51238825	51246717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51246060
transcript_21804.known	chr12	+	601	4	FSM	ENSG00000183283.16	ENST00000549732.6	601	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.592106351271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGCACTTTTCAAATT	51234853	True	NA	NA	False	NA	NA	NA	51238853	51242594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240966_51241117_51242329
transcript_21806.known	chr12	+	587	4	FSM	ENSG00000183283.16	ENST00000551313.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	1	63	junction_1	149.046599722667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAATGTAACTGCTTTA	51239222	True	NA	NA	False	NA	NA	NA	51239294	51242510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51239336_51240342_51240462_51240870_51241117_51242329
transcript_21807.known	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	-51269938	False	556	NA	False	NA	NA	NA	51269958	51246084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
transcript_21808.known	chr12	-	1875	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGCCTCTGTTGTCCA	-51269859	True	NA	NA	False	ATTAAA	-25	NA	51270415	51244557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
transcript_21810.known	chr12	+	1811	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.592106351271	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	51234902	False	NA	NA	False	AATAAA	-44	NA	51238902	51243785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
transcript_21811.known	chr12	+	1045	4	FSM	ENSG00000183283.16	ENST00000604900.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	171.204231515722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTGGAACCCTTGTGA	51234885	True	NA	18	True	AATAAA	-31	NA	51238885	51271362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51270717
transcript_21812.known	chr12	+	598	2	FSM	ENSG00000183283.16	ENST00000549041.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	2	251	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCTTCTAGCTCTAT	51234836	True	NA	NA	False	CATAAA	-20	NA	51238836	51240856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342
transcript_21813.known	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	18.1913020256318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	51391298	False	NA	1	True	AATAAA	-15	NA	51391316	51474575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_21814.nic	chr12	+	2317	15	ISM	ENSG00000050438.17	ENST00000319957.10	3834	22	-164	23287	-22	0	5prime_fragment	FALSE	canonical	3	59	junction_12	7.29446253492808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	51423889	True	NA	1	True	AATAAA	-15	NA	51424808	51474575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_21820.known	chr12	+	2485	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	36.83936602181	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	52051175	True	NA	15	True	AATAAA	-21	NA	52051441	52059503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_21823.known	chr12	+	846	4	FSM	ENSG00000123395.15	ENST00000553049.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	181.846699783698	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCCTTCCAGATCACT	52065020	True	NA	NA	False	NA	NA	NA	52070002	52077104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52070072_52070353_52070484_52073574_52073903_52076785
transcript_21824.known	chr12	+	1433	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	58.1262992686328	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	52064995	True	NA	16	True	AATAAA	-25	NA	52069977	52077495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
transcript_21825.known	chr12	+	658	4	FSM	ENSG00000123395.15	ENST00000548915.1	658	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.424608550826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGTGGGTGAGAAACT	52065037	True	NA	NA	False	NA	NA	NA	52070019	52076956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52070049_52070353_52070484_52073574_52073903_52076785
transcript_2183.known	chr1	+	503	3	FSM	ENSG00000130770.18	ENST00000335514.10	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	3943	junction_2	212	4872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGATGCCTTCTTC	28179949	True	NA	13	True	AATAAA	-15	NA	28236123	28238100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28236271_28236360_28236453_28237836
transcript_21830.nnic	chr12	+	1378	9	NIC	ENSG00000135480.17	novel	586	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	10.711413305442	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGGTATCCTGGCTT	52232626	True	NA	10	True	AATAAA	-31	NA	52232660	52248921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_52232792_52235154_52235367_52237508_52237570_52238679_52238776_52241471_52241637_52243011_52243138_52245411_52245633_52248176_52248212_52248590
transcript_2184.known	chr1	+	539	3	FSM	ENSG00000130770.18	ENST00000468425.2	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	130	junction_2	2118.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGATTGATTGATTGA	28179967	True	NA	NA	False	AATAAA	-34	NA	28236141	28246906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28236271_28236360_28236453_28246588
transcript_21844.known	chr12	-	2437	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	10	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTACTGCCTTTTACT	-52948598	True	NA	NA	False	AATAAA	-18	NA	52949874	52946613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_52948829_52949455_52949518_52949714
transcript_21845.known	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	24.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	-52948644	True	NA	-12	True	AATACA	-14	NA	52949920	52948650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_52948829_52949455_52949579_52949714
transcript_21846.known	chr12	+	1420	8	FSM	ENSG00000111057.11	ENST00000388837.6	1420	8	0	0	0	0	multi-exon	FALSE	canonical	1	708	junction_1	2707.31093334251	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATGTCACTTTGTCTT	52948718	False	NA	17	True	AATAAA	-14	NA	52948870	52952900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_21847.known	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2195	junction_3	1957.13334156533	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	52895917	True	NA	23	True	AATAAA	-20	NA	52949117	52952906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_21857.known	chr12	+	3856	15	FSM	ENSG00000063046.18	ENST00000262056.14	3856	15	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	241.585082405384	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGTTCTTTGACAAA	52977002	True	NA	5	True	AATAAA	-25	NA	53006455	53042215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034710_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_2186.known	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4367	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	28179979	True	NA	11	True	AATAAA	-13	NA	28236153	28238098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28236271_28236360
transcript_21860.known	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	401.663454414569	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	52977002	True	NA	-82	True	NA	NA	NA	53006455	53040280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_21870.known	chr12	-	2902	11	FSM	ENSG00000167778.9	ENST00000301463.9	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	6.84178339323893	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATCCTACTCTGA	-53078597	True	NA	0	True	AATAGA	-18	NA	53079390	53064315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53074785_53075094_53075220_53075735_53075812_53077114_53077262_53079310
transcript_2188.known	chr1	+	3462	10	FSM	ENSG00000130766.5	ENST00000253063.4	3462	10	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_3	18.8882352828094	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	28257584	True	NA	25	True	AATAAA	-25	NA	28259517	28282491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28259938_28269182_28269249_28271673_28271872_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_21880.known	chr12	-	1645	5	FSM	ENSG00000257337.8	ENST00000657514.2	1750	5	92	13	31	0	multi-exon	FALSE	canonical	2	3	junction_1	8.13557004763649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	-53053947	False	NA	-28	True	AAAAAG	-44	NA	53054353	53038985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53053395_53053575_53054320
transcript_21882.known	chr12	-	1563	4	FSM	ENSG00000257337.8	ENST00000662901.2	1591	4	0	28	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6770782520313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	-53054044	True	NA	-28	True	AAAAAG	-44	NA	53054450	53038985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53054320
transcript_21883.known	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-53054032	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
transcript_21885.known	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.9691092959247	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53097138	True	NA	10	True	AATAAA	-16	NA	53097666	53102340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
transcript_21886.nnic	chr12	+	772	4	NNC	ENSG00000167779.9	novel	1177	4	NA	NA	445	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	33.4099120355355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53098062	True	NA	10	True	AATAAA	-16	NA	53098111	53102340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_53098322_53100711_53100858_53101040_53101161_53102044
transcript_21888.known	chr12	-	2917	10	FSM	ENSG00000172819.17	ENST00000425354.7	2917	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	118.37677867046	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53231824	True	NA	-3	True	AATAAA	-15	NA	53232209	53210568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
transcript_21890.known	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	58.8325191209968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-53220125	False	331	NA	False	NA	NA	NA	53220259	53211330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
transcript_21891.nnic	chr12	-	2018	4	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	143.204593346567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53214698	False	417	-3	True	AATAAA	-15	NA	53214832	53210568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_53211864_53213084_53213244_53214058_53214236_53214445
transcript_21895.known	chr12	+	1763	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	53249830	True	NA	21	True	AATAAA	-17	NA	53252094	53254406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53252269_53252817
transcript_21896.nic	chr12	+	488	2	ISM	ENSG00000135476.12	ENST00000549154.1	4078	10	5593	-3	4968	0	3prime_fragment	FALSE	canonical	3	202	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	NA	False	NA	8	True	AATAAA	-16	NA	53292848	53293638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_53292971_53293272
transcript_21900.known	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	22.2311093340441	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	53294049	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_21904.known	chr12	+	640	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1280.64193278215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53274170	True	NA	31	True	AATAAA	-21	NA	53295524	53299452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
transcript_21907.known	chr12	+	596	6	FSM	ENSG00000123349.15	ENST00000334478.9	596	6	0	0	0	0	multi-exon	FALSE	canonical	3	2765	junction_2	207.425552909954	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_21908.known	chr12	+	635	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1541.46807946191	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	53274151	True	NA	26	True	AATAAA	-16	NA	53295505	53299447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
transcript_21914.known	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	172.518288885556	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53294104	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
transcript_21919.known	chr12	+	564	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1358.27666548461	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
transcript_21921.known	chr12	+	946	5	FSM	ENSG00000123349.15	ENST00000550069.2	946	5	0	0	0	0	multi-exon	TRUE	canonical	2	126	junction_3	1319.18402810222	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAATGTTGGTCT	NA	False	NA	18	True	AATAAA	-8	NA	53295478	53299439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298048_53298151_53299268
transcript_21923.known	chr12	+	1848	10	FSM	ENSG00000288663.1	ENST00000676527.1	1848	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1409.85434848803	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53295471	False	NA	13	True	AATAAA	-14	NA	53295491	53307171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296218_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_21924.known	chr12	+	528	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1406.06089839665	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53274154	True	NA	31	True	AATAAA	-21	NA	53295508	53299452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_21926.known	chr12	+	595	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1606.33766297749	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	53274170	True	NA	24	True	AATAAA	-14	NA	53295524	53299445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
transcript_21927.known	chr12	+	559	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1606.84852661973	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
transcript_21929.known	chr12	+	840	5	FSM	ENSG00000139637.14	ENST00000549488.5	840	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	190.589873812855	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	53299935	False	NA	19	True	AATAAA	-20	NA	53300092	53307177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_21933.known	chr12	+	478	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	1306.6769557418	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274170	True	NA	29	True	AATAAA	-19	NA	53295524	53299450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
transcript_21936.known	chr12	+	392	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1583	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274181	True	NA	29	True	AATAAA	-19	NA	53295535	53299450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53298044_53298151_53299268
transcript_21937.known	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	-53300302	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53299130_53300142
transcript_2194.nnic	chr1	+	1321	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326155	True	NA	8	True	AATAAA	-14	NA	28328999	28335965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28329181_28330596_28330736_28334416_28335161_28335708
transcript_21946.known	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	54.8826627148015	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316768	True	NA	-7	True	AATAAA	-23	NA	53321610	53307459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_21948.nic	chr12	-	1699	16	NIC	ENSG00000094914.14	novel	1815	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	117.361814725044	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316780	True	NA	-7	True	AATAAA	-23	NA	53321622	53307459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321470
transcript_21960.known	chr12	-	1937	15	FSM	ENSG00000094914.14	ENST00000548880.2	1937	15	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_14	56.2935092499435	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTTGGGCGGGCCCAGG	-53316773	True	NA	NA	False	NA	NA	NA	53321615	53307642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315783_53320564_53320693_53321342
transcript_21963.known	chr12	-	1703	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	118.364212220983	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACCAGTCTGTCTTT	-53316754	True	NA	-6	True	AATAAA	-24	NA	53321596	53307458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_2198.known	chr1	+	1106	4	FSM	ENSG00000130772.14	ENST00000398997.2	1106	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.24345659257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTGTGTAATTCTGA	28326210	True	NA	7	True	AATAAA	-13	NA	28329054	28335964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28329181_28330596_28330736_28334416_28335087_28335793
transcript_21980.known	chr12	-	1606	16	FSM	ENSG00000094914.14	ENST00000549450.6	1606	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	117.361814725044	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTACCAGTCTGTCTTTT	-53321246	False	321	-5	True	AATAAA	-25	NA	53321257	53307457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321200
transcript_21986.known	chr12	+	1814	15	FSM	ENSG00000197111.16	ENST00000359462.9	1814	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	255.582577813185	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTGGGTTTTATTCC	53452114	False	NA	50	True	AATAGA	-18	NA	53452128	53479832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_21989.known	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	233.654954484389	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53446962	True	NA	32	True	ATTAAA	-16	NA	53452367	53479614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_21996.known	chr12	+	3077	14	FSM	ENSG00000197111.16	ENST00000447282.5	3077	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	262.917405529146	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	53452087	True	NA	9	True	TATAAA	-14	NA	53452101	53481161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_22.known	ERCC-00058	+	1120	1	FSM	ERCC-00058A	DQ459418	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00058_+_0_1100
transcript_22004.known	chr12	+	1730	14	FSM	ENSG00000197111.16	ENST00000359282.9	1730	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	224.250045351694	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGATTCATGTGGGTTT	53452087	True	NA	44	True	ATTAAA	-44	NA	53452101	53479826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_22014.known	chr12	+	1619	13	FSM	ENSG00000197111.16	ENST00000549863.5	1619	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	286.69218636409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAATTAAAAGATGG	53452111	False	NA	-13	True	AATACA	-33	NA	53452125	53479769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_22018.known	chr12	+	3026	13	FSM	ENSG00000197111.16	ENST00000437231.5	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	227.216291351557	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	53452087	True	NA	9	True	TATAAA	-14	NA	53452101	53481161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_2202.known	chr1	+	6048	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	13.2173456053805	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	28363505	True	NA	12	True	ATTAAA	-25	NA	28369739	28500364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_22042.known	chr12	+	1105	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	295.398412694148	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433770	True	NA	27	True	AATAAA	-20	NA	53441733	53446638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
transcript_22043.known	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	866.227452809018	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	53433768	True	NA	25	True	AATAAA	-18	NA	53441731	53446636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
transcript_22044.known	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	857.603378931984	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433798	True	NA	27	True	AATAAA	-20	NA	53441761	53446638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
transcript_22045.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549068.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	876.22156000764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCAGGCCTTTTGTTG	53433781	True	NA	-49	True	AATACA	-3	NA	53441744	53446475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443566_53443774_53446014
transcript_22047.known	chr12	+	810	4	FSM	ENSG00000205352.11	ENST00000546581.5	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	864.411296136792	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATCACCTTGGCTGG	53433784	True	NA	34	True	AATAAA	-27	NA	53441747	53446645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443678_53443774_53446014
transcript_22049.known	chr12	+	688	4	FSM	ENSG00000205352.11	ENST00000547368.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_1	988.217362504604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGAGGATTGCCATGG	53433792	True	NA	NA	False	NA	NA	NA	53441755	53446218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441818_53442694_53442734_53443390_53443774_53446014
transcript_22051.known	chr12	+	1418	12	FSM	ENSG00000197111.16	ENST00000552819.5	1418	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	266.608450945769	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGATTCATGTGGGT	53454472	True	NA	42	True	ATTAAA	-42	NA	53454733	53479824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_22053.known	chr12	+	1510	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	50.9386886364382	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493782	True	NA	27	True	AATAAA	-24	NA	53501282	53506431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22054.known	chr12	+	1855	9	FSM	ENSG00000139546.11	ENST00000550147.5	1855	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	130.652150288466	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53500883	True	NA	27	True	AATAAA	-24	NA	53500920	53506431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22057.known	chr12	+	1514	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	156.83903970313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCCTTCTCTTC	53501018	True	NA	19	True	AATAAA	-16	NA	53501603	53506423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22059.known	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	112.281384810662	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	53501033	False	NA	8	True	AATAAA	-5	NA	53501618	53506412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22061.nic	chr12	+	1461	9	NIC	ENSG00000139546.11	novel	1402	9	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	157.313381503291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53494061	False	NA	27	True	AATAAA	-24	NA	53501561	53506431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53501709_53502014_53502185_53503026_53503130_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_2207.known	chr1	+	2686	14	FSM	ENSG00000180198.17	ENST00000649185.1	2686	14	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_3	291.949902486934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAGTTTTATAAAAT	28462191	True	NA	83	True	NA	NA	NA	28505979	28538968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_22071.nic	chr12	+	1345	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	137.262447857514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493777	True	NA	27	True	AATAAA	-24	NA	53501277	53506431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_2208.known	chr1	+	2844	13	FSM	ENSG00000180198.17	ENST00000373833.10	2844	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	255.961083739089	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTGAGACAGA	28462268	True	NA	132	True	AATAGA	-37	NA	28506056	28539300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829_28508902_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_22097.known	chr12	-	440	3	FSM	ENSG00000139574.9	ENST00000267017.4	440	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-53507462	True	NA	-2	True	AATAAA	-18	NA	53507484	53506687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53506894_53507020_53507143_53507372
transcript_22098.known	chr12	-	670	2	FSM	ENSG00000139574.9	ENST00000448979.4	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-53507462	True	NA	-2	True	AATAAA	-18	NA	53507484	53506687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53506894_53507020
transcript_22099.known	chr12	-	5218	12	FSM	ENSG00000170653.19	ENST00000456903.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_8	44.2194004018692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGACTCCCTCCACCCC	-53625983	False	2630	NA	False	NA	NA	NA	53626000	53513441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53625950
transcript_221.known	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	3029	junction_1	14741	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1382_1468_1535_1640
transcript_22100.known	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_8	47.4101150416708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-53623752	True	NA	0	True	ATTAAA	-18	NA	53626382	53512053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
transcript_22101.known	chr12	-	774	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.3583716388164	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53625979	False	2630	-2	True	AATAAA	-21	NA	53625996	53542886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
transcript_22102.known	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1.69967317119759	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53623780	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
transcript_2211.known	chr1	+	2715	12	FSM	ENSG00000180198.17	ENST00000398958.6	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	205.472525359684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	28505926	True	NA	28	True	NA	NA	NA	28505942	28539196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_22114.known	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	4034	junction_4	804.124368490347	6743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	-53590281	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
transcript_22115.known	chr12	-	5576	15	FSM	ENSG00000012822.16	ENST00000550804.6	5576	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	12.6491106406735	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGCCATGTGTTGCTT	-53726492	True	NA	NA	False	AATAAA	-20	NA	53727452	53708516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_22118.nnic	chr12	-	587	3	NNC	ENSG00000260492.3	novel	1390	3	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACAGCATCTCAAATCC	-53755941	True	NA	-4	True	AATAAA	-22	NA	53756057	53746339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_53746548_53746707_53746849_53755819
transcript_22119.nnic	chr12	-	750	2	NIC	ENSG00000260492.3	novel	1390	3	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCATCTCAAATCCCTG	-53755941	True	NA	-1	True	AATAAA	-25	NA	53756057	53746336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_53746849_53755819
transcript_22121.known	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	88.6476170012483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	-54187243	True	NA	-1	True	AATAAA	-29	NA	54188957	54180357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
transcript_22125.nic	chr12	-	746	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	86.6469128128637	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187279	True	NA	-16	True	AATAAA	-34	NA	54188993	54181452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187903_54188950
transcript_22126.known	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	85.9051075315083	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187226	True	NA	-16	True	AATAAA	-34	NA	54188940	54181452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
transcript_22128.nnic	chr12	-	789	5	NNC	ENSG00000123415.16	novel	926	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	85.9051075315083	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187238	True	NA	-16	True	AATAAA	-34	NA	54188952	54181452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188869
transcript_22129.nic	chr12	-	751	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	69.3072867741914	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187281	True	NA	-16	True	AATAAA	-34	NA	54188995	54181452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188950
transcript_2213.nic	chr1	+	2419	11	NIC	ENSG00000180198.17	novel	1577	11	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_2	198.825149314668	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTTGTTTTCTACACA	28518187	False	NA	-92	True	AATAAA	-20	NA	28518197	28538989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28518309_28529857_28529940_28530522_28530574_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_22130.nic	chr12	-	741	5	NIC	ENSG00000123415.16	novel	712	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	101.858664334459	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187276	True	NA	-16	True	AATAAA	-34	NA	54188990	54181452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54188514_54188597_54188950
transcript_22134.known	chr12	-	627	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	66.1362230551458	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	-54187262	True	NA	-34	True	AATAAA	-16	NA	54188976	54181470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
transcript_22137.known	chr12	-	2681	4	FSM	ENSG00000123415.16	ENST00000682136.1	2681	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	97.9977324000691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGAAGGAGACTCT	-54187271	True	NA	-9	True	AATAAA	-21	NA	54188985	54180365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54187818_54187903_54188950
transcript_2214.known	chr1	+	1577	11	FSM	ENSG00000180198.17	ENST00000373831.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_3	215.879804520942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTCCTCTTTGGAAT	28513260	True	NA	24	True	NA	NA	NA	28518256	28538164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28518309_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_22141.known	chr12	-	1571	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	79.1243746684084	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	-54187260	True	NA	-31	True	AATAAA	-19	NA	54188974	54181467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
transcript_22142.known	chr12	-	465	4	FSM	ENSG00000123415.16	ENST00000507904.5	465	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	111.251466906683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTGGGGCCTGTGCT	-54187276	True	NA	NA	False	NA	NA	NA	54188990	54182584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54188514_54188597_54188950
transcript_22145.known	chr12	-	1697	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	81	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGAGAGTCTGGGCTT	-54187280	True	NA	NA	False	NA	NA	NA	54188994	54181274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54188950
transcript_22146.known	chr12	+	1369	2	FSM	ENSG00000250742.5	ENST00000508564.1	1369	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTCGGAGTCAGCTG	54126033	False	NA	NA	False	AATAAA	-16	NA	54126097	54132843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54126613_54131989
transcript_22165.known	chr12	+	3744	11	FSM	ENSG00000135486.19	ENST00000340913.11	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_7	5175.37763742898	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54066798	True	NA	39	True	AATAAA	-15	NA	54280725	54287087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
transcript_22173.known	chr12	+	1234	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_9	5569.26139088479	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	54066820	True	NA	40	True	AATAAA	-16	NA	54280747	54287088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
transcript_2220.known	chr1	+	2424	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	74.2978656456979	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	28518125	False	NA	98	True	AATAAA	-14	NA	28518135	28538983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_22205.known	chr12	+	1811	10	FSM	ENSG00000135486.19	ENST00000677375.1	1811	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	4638.04587948922	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTCTCTTGAATGA	54280641	False	NA	-2	True	AATAAA	-2	NA	54280662	54285229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284239_54284318_54284548
transcript_22206.known	chr12	+	2278	10	FSM	ENSG00000135486.19	ENST00000677249.1	2278	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	4724.11971811798	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	54280669	False	NA	42	True	NA	NA	NA	54280690	54285745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282663_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_22215.known	chr12	+	1294	10	FSM	ENSG00000135486.19	ENST00000330752.12	1294	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	4723.82208977037	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGTGTAAAGTTAGTC	54066847	True	NA	23	True	AATAAA	-15	NA	54280774	54284881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282670_54282842_54282875_54283811_54283968_54284257_54284318_54284548
transcript_22229.known	chr12	+	797	10	FSM	ENSG00000111481.10	ENST00000552218.5	797	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	588.633403699295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTCTTTTTCATTCTTC	54315380	True	NA	NA	False	NA	NA	NA	54325130	54350690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54346611_54346675_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22246.known	chr12	+	2596	9	FSM	ENSG00000135486.19	ENST00000550482.2	2596	9	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_7	1566.82042186557	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	54066776	True	NA	139	True	NA	NA	NA	54280703	54285842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257
transcript_22255.known	chr12	+	2515	9	FSM	ENSG00000135486.19	ENST00000679228.1	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_6	1180.93373411678	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	54066821	True	NA	42	True	NA	NA	NA	54280748	54285745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_22264.known	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	227.003166277477	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	54315380	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22267.known	chr12	+	1232	9	FSM	ENSG00000111481.10	ENST00000549043.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	466.429104339556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGACAACATGGAAG	54315378	True	NA	NA	False	NA	NA	NA	54325128	54351102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54340462_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22293.known	chr12	+	1026	8	FSM	ENSG00000111481.10	ENST00000550171.5	1026	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	510.827020524521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGGAATAGTTCATA	54315388	True	NA	NA	False	NA	NA	NA	54325138	54351082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22295.known	chr12	+	880	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	422.387577120969	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	54315388	True	NA	50	True	NA	NA	NA	54325138	54350913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22334.known	chr12	-	894	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	189.577161071686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGATGGTCTCTGTC	-54251981	True	NA	NA	False	AAGAAA	-15	NA	54259545	54241754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
transcript_22335.known	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	171.844951918874	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-54252028	True	NA	NA	False	NA	NA	NA	54259592	54240624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
transcript_22336.known	chr12	-	11546	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	41.3702791868752	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGGTGGTTTAA	-54239718	True	NA	-7	True	AATAAA	-20	NA	54280122	54230941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
transcript_22352.known	chr12	-	1656	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCACTGTGTCTTC	-54300759	True	NA	-5	True	TATAAA	-15	NA	54301015	54292110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54293382_54295134_54295305_54300800
transcript_22353.known	chr12	-	2627	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATTAAACATTTTT	-54239729	True	NA	NA	False	AATAAA	-29	NA	54280133	54271840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54274342_54280007
transcript_22357.known	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	54285779	False	NA	3	True	NA	NA	NA	54285906	54287051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54286733_54286952
transcript_22358.known	chr12	+	372	3	FSM	ENSG00000135486.19	ENST00000551803.1	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	237.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54285819	False	NA	39	True	AATAAA	-15	NA	54285946	54287087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54286113_54286661_54286733_54286952
transcript_22360.known	chr12	-	2331	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	17.8142341619142	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCCCCTAGACTCAGAC	-54390179	True	NA	-12	True	AATAAA	-19	NA	54391298	54369139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
transcript_22363.known	chr12	-	807	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.28787565221539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATAGTTTGGTCAAGTA	-54473530	True	NA	-5	True	AATAAA	-17	NA	54473602	54455956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
transcript_22364.known	chr12	-	671	8	FSM	ENSG00000170627.11	ENST00000552395.5	671	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3.68117106477861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTAATAGTTTGGTCAA	-54473498	False	NA	-8	True	AATAAA	-14	NA	54473570	54455959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54471232_54471278_54473545
transcript_22372.known	chr12	+	571	4	FSM	ENSG00000135441.8	ENST00000548925.6	562	4	-9	0	-1	0	multi-exon	FALSE	canonical	3	867	junction_1	143.327906874024	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55716022	False	NA	8	True	AATAAA	-16	NA	55716036	55719703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55719498
transcript_22374.known	chr12	+	837	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	404.320280086083	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55716180	False	NA	8	True	AATAAA	-16	NA	55716291	55719703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
transcript_22376.known	chr12	+	1229	3	FSM	ENSG00000135441.8	ENST00000549147.1	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGGGGGCACTTCA	55716023	False	NA	NA	False	NA	NA	NA	55716037	55720087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716197_55716932_55717006_55719090
transcript_22377.known	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	567.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	55708393	True	NA	-25	True	NA	NA	NA	55716080	55719670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716197_55719090_55719224_55719498
transcript_22378.known	chr12	+	531	3	FSM	ENSG00000135441.8	ENST00000551926.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAGTGTCAGAAAAGGTA	55714109	True	NA	NA	False	NA	NA	NA	55716512	55719343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716718_55716932_55717006_55719090
transcript_22379.known	chr12	+	525	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	537.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55714127	True	NA	8	True	AATAAA	-16	NA	55716530	55719703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716718_55719090_55719224_55719498
transcript_22380.known	chr12	+	1316	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGACTGATGGCAGCA	55681529	True	NA	7	True	AATAAA	-18	NA	55681735	55684611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55682253_55683812
transcript_2239.nnic	chr1	+	987	4	NNC	ENSG00000242125.3	novel	2201	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	463.983476717293	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTGGTTCATTTTTG	28462254	True	NA	14	True	AATAAA	-10	NA	28506042	28509633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28506085_28506219_28506328_28508127_28508161_28508829
transcript_22394.known	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	1010.90714969582	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	-55728611	False	NA	-2	True	NA	NA	NA	55728650	55725442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
transcript_22396.known	chr12	-	1023	8	FSM	ENSG00000135404.12	ENST00000257857.9	1023	8	0	0	0	0	multi-exon	FALSE	canonical	3	2649	junction_7	164.624619380342	6804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGCAGTGGGAGAAG	-55691958	True	NA	NA	False	NA	NA	NA	55729009	55725322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728952
transcript_22398.known	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	990.426129687291	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
transcript_224.known	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_-_1500_1800
transcript_22413.known	chr12	+	1443	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	10	5	10	-5	multi-exon	FALSE	canonical	3	16	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	55728655	True	NA	19	True	NA	NA	NA	55729103	55730852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55729356_55729661
transcript_22414.known	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	2791	junction_3	136.235906508608	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	-55728443	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
transcript_22415.known	chr12	-	829	8	FSM	ENSG00000135404.12	ENST00000550050.5	829	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1036.50992099764	5643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATTAAACGGATTA	-55691949	True	NA	-66	True	NA	NA	NA	55729000	55725506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727150_55727340_55728275_55728353_55728952
transcript_2242.known	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	131	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	28462191	True	NA	25	True	AGTAAA	-17	NA	28505979	28510892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829
transcript_22423.known	chr12	-	3236	9	FSM	ENSG00000123342.16	ENST00000322569.9	3236	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGGCGTCTG	-55842907	True	NA	NA	False	AATAAA	-17	NA	55842936	55835432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55837375_55837554_55837683_55837842_55838008_55838605_55838735_55839495_55839742_55840666_55840883_55841105_55841237_55842352_55842439_55842743
transcript_22427.known	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_6	35.5933826558939	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	-55825692	True	NA	-29	True	TATAAA	-15	NA	55829587	55820984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
transcript_22433.known	chr12	+	884	5	FSM	ENSG00000182796.15	ENST00000636428.1	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	14.0890028036054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAATTGACTCCCGAA	55829925	True	NA	NA	False	AATAGA	-15	NA	55830827	55835234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55831256_55831350_55832958_55833015_55833446_55833542_55834850
transcript_22435.known	chr12	+	2019	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	46.5403051128804	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	55813072	True	NA	NA	False	AATAAA	-15	NA	55818040	55821879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
transcript_22436.known	chr12	+	760	4	FSM	ENSG00000123353.10	ENST00000552672.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	186.456429226777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTTGCTGTGTATT	55813072	True	NA	20	True	NA	NA	NA	55818040	55820712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55818113_55819090_55819174_55819341_55819494_55820259
transcript_22437.known	chr12	+	593	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	16.9771087709958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	55829936	True	NA	NA	False	NA	NA	NA	55830838	55835047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
transcript_22438.known	chr12	+	575	4	FSM	ENSG00000182796.15	ENST00000637951.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	21.4165045389453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	55829938	True	NA	NA	False	NA	NA	NA	55830840	55835007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55832958_55833039_55833446_55833542_55834850
transcript_22441.known	chr12	+	2313	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	10.9848380355227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	55829938	True	NA	10	True	AATAAA	-17	NA	55830840	55836244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
transcript_22443.known	chr12	+	2924	5	FSM	ENSG00000182796.15	ENST00000478241.6	2924	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	24.701973605362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	55829569	False	NA	10	True	AATAAA	-17	NA	55829607	55836244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55829826_55829959_55831084_55831256_55831350_55833446_55833542_55834850
transcript_22446.known	chr12	+	2230	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	55829930	True	NA	12	True	AATAAA	-19	NA	55830832	55836246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55832958_55833542_55834850
transcript_22450.known	chr12	+	8801	3	FSM	ENSG00000135414.10	ENST00000257868.10	8801	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCTTTTCTATTT	55743061	True	NA	8	True	AATAAA	-24	NA	55743121	55757264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55743762_55748585_55748984_55749501
transcript_22451.known	chr12	-	997	11	FSM	ENSG00000205323.9	ENST00000552884.5	997	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	1020.60535467927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATGTTCAGAGGGG	-55777622	True	NA	NA	False	AATAAA	-16	NA	55817722	55752579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55803628_55803729_55817665
transcript_22452.known	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_1	157.957715860923	3167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-55777624	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_22453.known	chr12	+	2727	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.796449742028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	55930888	True	NA	26	True	AATAAA	-33	NA	55931161	55954023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_22454.nic	chr12	+	2623	24	NIC	ENSG00000065357.20	novel	2770	24	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	11.1912401606213	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	55931774	True	NA	26	True	AATAAA	-33	NA	55932044	55954023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_55932124_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_22458.known	chr12	-	1073	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	353.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	-55927100	False	10249	-3	True	AATAAA	-16	NA	55927112	55901413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55902356_55903386_55903481_55927075
transcript_22459.known	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	29.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	-55917645	True	NA	-2	True	AATAAA	-17	NA	55927894	55901412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55902356_55903386_55903481_55927724
transcript_2246.known	chr1	+	185	2	FSM	ENSG00000242125.3	ENST00000447507.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTTAATCATTCTCAG	28462254	True	NA	NA	False	NA	NA	NA	28506042	28508270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127
transcript_22462.known	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	-55927744	False	NA	NA	False	ATTAAA	-1	NA	55927756	55913745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55914367_55927724
transcript_22464.nic	chr12	-	2008	12	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_6	124.916765676619	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963160	True	NA	-8	True	AATAAA	-15	NA	55966050	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22466.nic	chr12	-	2029	12	NIC	ENSG00000185664.15	novel	2127	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	192.578373012304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963160	True	NA	-8	True	AATAAA	-15	NA	55966050	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22468.nic	chr12	-	1561	11	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_7	204.627197605792	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963160	True	NA	-8	True	AATAAA	-15	NA	55966050	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957387_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22470.nic	chr12	-	1846	11	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	205.789795665383	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963160	True	NA	-8	True	AATAAA	-15	NA	55966050	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22472.known	chr12	-	2126	11	FSM	ENSG00000185664.15	ENST00000548747.6	2126	11	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_8	56.5887798066012	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963152	True	NA	-8	True	AATAAA	-15	NA	55966042	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22474.known	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	174.733511382333	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55965975	False	NA	-8	True	AATAAA	-15	NA	55966022	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22475.nic	chr12	-	1744	10	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	208.675777815523	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963154	True	NA	-8	True	AATAAA	-15	NA	55966044	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55965935
transcript_22481.nic	chr12	-	1972	10	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	16	junction_6	187.305454627817	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55963160	True	NA	-8	True	AATAAA	-15	NA	55966050	55954104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22485.known	chr12	-	1867	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	193.079606315633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	-55963152	True	NA	-9	True	AATAAA	-14	NA	55966042	55954105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
transcript_22492.known	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_3	29.2498812913071	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	55959775	True	NA	23	True	ATTAAA	-26	NA	55966829	55972789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
transcript_22495.known	chr12	-	461	3	FSM	ENSG00000185664.15	ENST00000549413.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_2	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTCGCTCTGTCGCCC	-55965974	False	NA	NA	False	NA	NA	NA	55966021	55961199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55961464_55961621_55961733_55965935
transcript_22496.known	chr12	+	5273	6	FSM	ENSG00000111540.16	ENST00000360299.10	5273	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	70.0097136117553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTGTTTCATTTTTG	55971181	True	NA	13	True	AATAAA	-14	NA	55974077	55996683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_22499.known	chr12	+	3322	6	FSM	ENSG00000111540.16	ENST00000553116.5	3322	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	182.761702771669	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	55973898	False	NA	NA	False	AGTAAA	-19	NA	55973912	55994706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55974001_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_225.known	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_-_2400_2500
transcript_22500.known	chr12	+	2394	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	55.7544617048717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	55995587	True	NA	-20	True	NA	NA	NA	55997287	56005486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_22503.known	chr12	+	2319	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	49.1750699033565	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55995575	True	NA	19	True	AATAAA	-21	NA	55997275	56005525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
transcript_22504.known	chr12	+	543	5	FSM	ENSG00000139531.13	ENST00000552258.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	69.372184627558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAAGCTGATGCTAGC	55995595	True	NA	NA	False	NA	NA	NA	55997295	56003752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_22505.known	chr12	+	2306	4	FSM	ENSG00000139531.13	ENST00000356124.8	2306	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	63.8974873440958	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55997169	False	NA	19	True	AATAAA	-21	NA	55997179	56005525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_56002211_56002272_56002542_56002721_56003617
transcript_22506.known	chr12	+	623	5	FSM	ENSG00000197728.11	ENST00000552361.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7265.68000946918	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	56041754	False	NA	17	True	AATAAA	-18	NA	56041892	56044223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56042065_56042132_56042170_56042424_56042603_56043362_56043494_56044118
transcript_22508.known	chr12	+	1140	4	FSM	ENSG00000197728.11	ENST00000646449.2	1140	4	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	2794.30866027518	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTGAAATGGAGAT	56040100	True	NA	24	True	ATTAAA	-39	NA	56041917	56044697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56042170_56042424_56042603_56043362_56043494_56044118
transcript_22510.nnic	chr12	+	448	3	NNC	ENSG00000197728.11	novel	623	5	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	2	226	junction_1	7309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	55782183	False	NA	17	True	AATAAA	-18	NA	56042168	56044223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_56042381_56043362_56043494_56044118
transcript_22512.known	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	925	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	55782154	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56042170_56042424_56043494_56044118
transcript_22518.known	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1583	junction_4	102.848965586545	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	56073534	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
transcript_22526.nic	chr12	+	1459	12	ISM	ENSG00000170515.14	ENST00000303305.11	2386	13	-181	2401	-159	0	5prime_fragment	FALSE	canonical	3	1583	junction_4	107.420545305444	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAAAAGAAG	56104324	False	NA	NA	False	NA	NA	NA	56104377	56111509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475
transcript_2253.known	chr1	+	1132	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	84.5897872013249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	28549324	True	NA	19	True	NA	NA	NA	28553098	28577744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_22547.known	chr12	+	1027	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	3.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	56080011	False	NA	10	True	AATAAA	-23	NA	56080136	56085623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56080383_56083750_56083903_56084994
transcript_22549.known	chr12	+	469	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	5168	junction_1	7443.74423406811	31226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56088164	True	NA	7	True	AATAAA	-38	NA	56116589	56117832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
transcript_22550.known	chr12	+	335	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	9942.56822399972	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGTCCTCTGCCCTG	56088206	True	NA	NA	False	CATAAA	-10	NA	56116631	56117710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
transcript_22553.nnic	chr12	+	533	4	NNC	ENSG00000229117.9	novel	469	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10016.2713066734	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56088164	True	NA	7	True	AATAAA	-38	NA	56116589	56117832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_56116660_56116774_56116864_56117188_56117212_56117481
transcript_22554.known	chr12	+	551	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_2	9900.04488205315	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	56088207	True	NA	1	True	AATAAA	-32	NA	56116632	56117826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
transcript_22559.known	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_18	51.1742665365665	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	56120091	True	NA	19	True	ATTAAA	-17	NA	56128266	56144674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_22561.known	chr12	+	7121	3	FSM	ENSG00000135482.7	ENST00000257940.7	7121	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	14	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTTTTTCCCCCTT	56116035	True	NA	NA	False	AATAAA	-18	NA	56118265	56127514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56118319_56119087_56119152_56120510
transcript_22562.known	chr12	+	743	3	FSM	ENSG00000135482.7	ENST00000546903.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	39.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATTGCCGTTTCATCC	56118396	False	NA	NA	False	NA	NA	NA	56118406	56120828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56118768_56119087_56119152_56120510
transcript_22572.known	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	220.967630836625	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
transcript_2258.known	chr1	+	1799	9	FSM	ENSG00000180098.9	ENST00000373830.4	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	28.5689954321114	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTCTTCTT	28549310	True	NA	14	True	AATATA	-7	NA	28553084	28578545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_22580.known	chr12	+	573	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	5218.45728853099	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099321	True	NA	27	True	AATAAA	-15	NA	56158381	56161575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_22589.known	chr12	+	708	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	4951.44192522632	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	56099298	True	NA	31	True	AATAAA	-19	NA	56158358	56161579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_22598.known	chr12	+	502	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	4304.06126350451	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099296	True	NA	26	True	AATAAA	-14	NA	56158356	56161574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
transcript_226.known	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1006	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_9000_11000
transcript_22607.known	chr12	+	655	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	9526	junction_1	742.875601968459	11250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099301	True	NA	26	True	AATAAA	-14	NA	56158361	56161574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
transcript_22613.known	chr12	+	1564	6	FSM	ENSG00000092841.19	ENST00000550184.5	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	5189.70176407084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAAACTTGCTCTC	56099288	True	NA	2	True	NA	NA	NA	56158348	56161550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_2262.nic	chr1	+	1166	9	NIC	ENSG00000180098.9	novel	1799	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	73.3041608641692	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTACAACACTGCTGC	28549332	True	NA	39	True	NA	NA	NA	28553106	28577764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28553308_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_22620.known	chr12	+	454	5	FSM	ENSG00000092841.19	ENST00000552297.5	454	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	5323.3404162706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTGAACTGCGCTT	56099295	True	NA	76	True	NA	NA	NA	56158355	56160320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159497_56159623_56159974_56160149_56160242
transcript_22625.known	chr12	+	1438	5	FSM	ENSG00000092841.19	ENST00000551589.5	1438	5	0	0	0	0	multi-exon	FALSE	canonical	3	9526	junction_1	794.642175762148	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTGCAGTCTGGTAG	56099308	True	NA	NA	False	NA	NA	NA	56158368	56161298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242
transcript_22628.known	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_2	4410.98024819881	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099285	True	NA	27	True	AATAAA	-15	NA	56158345	56161575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
transcript_22636.known	chr12	+	582	4	FSM	ENSG00000092841.19	ENST00000548725.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	9526	junction_1	513.89514710904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAAAGCAGCCATATGG	56099303	True	NA	99	True	NA	NA	NA	56158363	56160343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974
transcript_22646.known	chr12	+	703	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.630404016932	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56145647	True	NA	18	True	AATAAA	-14	NA	56152606	56157976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
transcript_22647.known	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	69.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56157333	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56157546_56157697_56157736_56157881
transcript_22649.known	chr12	-	2452	8	FSM	ENSG00000181852.18	ENST00000394013.6	2452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.4158211725668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	-56217744	True	NA	-4	True	AAAAAG	-22	NA	56221909	56205449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212995_56213139_56213957_56214071_56216428_56216614_56221759
transcript_22653.known	chr12	-	5216	7	FSM	ENSG00000181852.18	ENST00000615206.4	5216	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	55.5960130465006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTGTGGCTGCTTTC	-56217536	False	NA	-1	True	AATACA	-21	NA	56221701	56202503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221590
transcript_22654.known	chr12	-	5593	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	28.7909129182572	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTGATACACTGTCT	-56217757	True	NA	NA	False	AGTAAA	-25	NA	56221922	56202178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
transcript_22657.known	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	37.6917320730511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	-56217768	True	NA	NA	False	NA	NA	NA	56221933	56206446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
transcript_22666.nic	chr12	-	1024	4	ISM	ENSG00000181852.18	ENST00000345093.9	5593	7	-31	7858	-20	0	5prime_fragment	FALSE	canonical	3	78	junction_3	38.7843038125248	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-56217788	True	NA	-12	True	ATTAAA	-16	NA	56221953	56210036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221759
transcript_22667.nic	chr12	-	900	4	ISM	ENSG00000181852.18	ENST00000552656.5	1193	7	-39	3590	-39	0	5prime_fragment	FALSE	canonical	3	51	junction_3	51.4220013439989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-56217807	True	NA	-12	True	ATTAAA	-16	NA	56221972	56210036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221902
transcript_22668.known	chr12	-	1001	5	FSM	ENSG00000181852.18	ENST00000548225.1	1001	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.5467347705608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-56217695	True	NA	-12	True	ATTAAA	-16	NA	56221860	56210036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56210569_56212991_56213062_56213957_56214071_56216428_56216614_56221759
transcript_22669.known	chr12	+	663	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	90.1437124201621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACTGAGTGCCCCAC	56221809	True	NA	NA	False	NA	NA	NA	56222014	56229032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22670.known	chr12	+	1400	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	43.9042518821735	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220158	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22671.known	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	88.3014093256098	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	56220217	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22674.known	chr12	+	1775	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	14.661514246489	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220175	True	NA	14	True	AATAAA	-14	NA	56224358	56229854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22676.known	chr12	+	1410	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	30.8139578762612	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56266989	True	NA	NA	False	AATAAA	-16	NA	56267282	56270966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_22681.known	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	366.741267141828	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-56282663	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
transcript_22686.known	chr12	-	2915	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_3	63.3719180710194	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-56282602	True	NA	0	True	AATAAA	-18	NA	56300330	56271698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
transcript_227.known	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	14712	junction_1	4112.8940608233	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
transcript_22700.known	chr12	-	1450	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	129.74035609632	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTCAATCTGGACTA	-56294704	True	NA	-21	True	AATAAA	-16	NA	56315988	56309843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
transcript_22702.nic	chr12	-	1128	6	Fusion	ENSG00000257727.6_ENSG00000135473.16	novel	1450	6	NA	NA	-222	0	multi-exon	FALSE	canonical	3	104	junction_5	552.75723423579	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACTGTGTTGTCTTTTC	-56316166	True	NA	-8	True	NA	NA	NA	56316341	56310432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315906
transcript_22711.known	chr12	-	674	5	FSM	ENSG00000257727.6	ENST00000551475.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	592.25010552975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGCCCCCACTTTAT	-56315875	False	NA	NA	False	NA	NA	NA	56316050	56310957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315906
transcript_22720.known	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_2	36	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-56315872	False	NA	-14	True	AATAAA	-29	NA	56316047	56314489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56314967_56315129_56315243_56315820
transcript_22722.known	chr12	-	666	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	772.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAATAAGAATAAAAGG	-56294716	True	NA	-32	True	AATAAA	-11	NA	56316000	56314507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56314967_56315129_56315243_56315906
transcript_22726.known	chr12	-	670	2	FSM	ENSG00000257727.6	ENST00000546388.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAATTTGTTAGCAAA	-56315722	False	NA	NA	False	NA	NA	NA	56315897	56314649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56315243_56315820
transcript_22728.known	chr12	-	595	2	FSM	ENSG00000135473.16	ENST00000549964.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGCCAGTACCGAGGAG	-56332707	True	NA	NA	False	NA	NA	NA	56333981	56332733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56333209_56333861
transcript_22730.known	chr12	+	1037	4	FSM	ENSG00000110944.9	ENST00000228534.6	1037	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.02768199119819	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	56338663	True	NA	8	True	AATAAA	-19	NA	56338883	56340410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56339207_56339425_56339525_56339690_56339838_56339942
transcript_22731.known	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_23	109.831039068458	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	-56438781	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_22734.known	chr12	-	2784	13	FSM	ENSG00000111602.12	ENST00000557589.1	2784	13	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_10	174.608530401263	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCTCAGTCTGACTTGG	-56424760	False	NA	-14	True	ATTAAA	-19	NA	56424789	56417126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423624_56423708_56423796_56423895_56424761
transcript_22736.known	chr12	-	2387	18	FSM	ENSG00000135423.13	ENST00000311966.9	2387	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	13.0253944145265	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	-56487411	True	NA	-11	True	AATAAA	-18	NA	56488161	56470951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_22744.known	chr12	-	859	3	FSM	ENSG00000135423.13	ENST00000471282.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCCCAGAAGTAAATAT	-56488264	False	NA	NA	False	AATATA	-44	NA	56488362	56479568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56479902_56480287_56480388_56487936
transcript_22745.known	chr12	+	10769	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCTCTGAGAGTCTAT	56467220	True	NA	NA	False	AATAAA	-39	NA	56468577	56479708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56468677_56469038
transcript_22748.known	chr12	+	8488	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	6.4450338663549	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	NA	False	NA	6	True	TATAAA	-33	NA	56521819	56596193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_2275.known	chr1	-	524	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	26.2404268257969	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	-28578172	False	NA	98	True	AATAAA	-27	NA	28581623	28578538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
transcript_22751.known	chr12	-	8938	29	FSM	ENSG00000076108.12	ENST00000549884.6	8938	29	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_28	38.0368376762339	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTTTTATTTAAAAA	-56625785	True	NA	NA	False	NA	NA	NA	56630326	56595595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56630124
transcript_2276.known	chr1	-	1871	6	FSM	ENSG00000197989.15	ENST00000648127.1	1871	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	13.3356664625357	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	NA	False	NA	99	True	AATAAA	-28	NA	28582986	28578537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581110_28581230_28581589
transcript_22762.known	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3887	junction_7	546.434503547009	10767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	-56550394	True	NA	-4	True	AATAAA	-18	NA	56645984	56638174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
transcript_22764.known	chr12	-	2077	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	1435.19658387797	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCATTTTGGCAGT	-56688398	False	NA	-10	True	AATAAA	-30	NA	56688408	56663342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
transcript_22774.known	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_5	88.4044508991233	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	-56635420	True	NA	-16	True	AATAAA	-24	NA	56688284	56663348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_2278.known	chr1	-	682	6	FSM	ENSG00000197989.15	ENST00000483436.5	682	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.1666504065002	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATATTTGTGTTTG	-28578367	False	NA	91	True	AATAAA	-20	NA	28581818	28578545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581093_28581230_28581589
transcript_22782.known	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	1215.61901241028	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	-56635423	True	NA	13	True	TTTAAA	-22	NA	56688287	56663612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_22783.known	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	1228.30109636576	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	-56635420	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_2279.known	chr1	-	550	6	FSM	ENSG00000197989.15	ENST00000531126.7	728	6	178	0	-72	0	multi-exon	FALSE	canonical	3	12	junction_2	29.1231866388278	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578244	False	NA	99	True	AATAAA	-28	NA	28581695	28578537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581110_28581230_28581589
transcript_228.known	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_2	8524.62155562736	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
transcript_22810.known	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	125.560377046358	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-56744978	True	NA	NA	False	NA	NA	NA	56752374	56731295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_22814.known	chr12	-	1459	13	FSM	ENSG00000198056.15	ENST00000552590.6	1459	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	104.976452386026	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTTGAGAAATAATTTA	-56744977	True	NA	16	True	AATAAA	-42	NA	56752373	56731595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_22825.known	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_7	3427.68182506451	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56633101	True	NA	-12	True	AATAAA	-20	NA	56725267	56712434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
transcript_22826.known	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_7	3739.08155261996	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	-56725501	False	NA	-27	True	NA	NA	NA	56725516	56712503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
transcript_22834.known	chr12	-	1107	7	FSM	ENSG00000196531.14	ENST00000678416.1	1107	7	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_6	4066.13426842854	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGCCACAGATTTCCC	-56633103	True	NA	NA	False	NA	NA	NA	56725269	56712316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724961
transcript_22835.known	chr12	-	712	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	4094.68373829612	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	-56633120	True	NA	-5	True	AATAAA	-27	NA	56725286	56712427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
transcript_22838.known	chr12	+	1751	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.33757453113766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCAGCAGTCTTT	56752303	True	NA	18	True	AATAAA	-23	NA	56752448	56787790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_22840.known	chr12	+	1547	6	FSM	ENSG00000025423.11	ENST00000554150.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.82304288624318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCATTTGTTCTTGC	56752307	True	NA	NA	False	NA	NA	NA	56752452	56787576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56752582_56763203_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_22845.known	chr12	-	827	8	FSM	ENSG00000196531.14	ENST00000548563.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	4881.73633379078	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGAATTCAGTCGGTG	-56633133	True	NA	-17	True	AATAAA	-15	NA	56725299	56712439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714704_56724451_56724550_56725262
transcript_22846.known	chr12	+	1722	6	FSM	ENSG00000025423.11	ENST00000555805.5	1722	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.63944442658207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	56752097	True	NA	-36	True	AAGAAA	-27	NA	56752160	56787736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56752319_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_22847.known	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.4926291781761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015871	True	NA	2	True	AATAAA	-18	NA	57016538	57009999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_22848.known	chr12	-	804	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	6.96219952473514	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015862	True	NA	2	True	AATAAA	-18	NA	57016529	57009999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_22849.known	chr12	-	731	6	FSM	ENSG00000166863.13	ENST00000441881.5	731	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7402989370935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGAATGATGTGGTG	-57015853	True	NA	-8	True	AATAAA	-8	NA	57016520	57010009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57010289_57012377_57012453_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_22850.known	chr12	-	5617	9	FSM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	25.298221281347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-57073256	True	NA	-3	True	AATAAA	-14	NA	57078791	57055642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_22852.known	chr12	-	5370	8	FSM	ENSG00000166881.10	ENST00000379391.7	5370	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	56.8330889535313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-57073228	True	NA	-3	True	AATAAA	-14	NA	57078763	57055642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57070819_57070894_57072787_57072913_57078618
transcript_22854.nic	chr12	-	1524	5	NIC	ENSG00000166881.10	novel	5617	9	NA	NA	2	-4215	intron_retention	FALSE	canonical	3	124	junction_1	27.7522521608607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTAAGTTGACTTTATTA	-57073254	True	NA	NA	False	AATAAA	-15	NA	57078789	57063804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_22857.known	chr12	-	3963	22	FSM	ENSG00000166888.12	ENST00000300134.8	3963	22	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_21	14.0084198846408	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACGCTCTAACTGCTC	-57108746	True	NA	NA	False	AATAAA	-26	NA	57111362	57095407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
transcript_2286.known	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.3204280323463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	NA	False	NA	99	True	AATAAA	-28	NA	28581878	28578537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
transcript_22860.known	chr12	+	2491	7	FSM	ENSG00000166886.13	ENST00000300131.8	2491	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	4.87909372276815	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGACCCCTGCCTTGAG	57088857	True	NA	20	True	AATAAA	-21	NA	57089113	57095476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57093406_57093599_57094611
transcript_22863.known	chr12	+	2157	12	FSM	ENSG00000182199.11	ENST00000328923.8	2157	12	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	58.8085561886341	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	57205518	True	NA	28	True	AATGAA	-16	NA	57229710	57234935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_22866.known	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	325.806716519052	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205893	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_22869.known	chr12	-	1177	4	FSM	ENSG00000185633.11	ENST00000554503.6	943	4	-234	0	-234	0	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	-57237252	False	NA	NA	False	AATACA	-21	NA	57237338	57234902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57235620_57235748_57235810_57236592_57236682_57237028
transcript_2287.known	chr1	-	1082	5	FSM	ENSG00000197989.15	ENST00000461832.2	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	14.4460202131937	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578422	True	NA	99	True	AATAAA	-28	NA	28581873	28578537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581110_28581230_28581589
transcript_22870.known	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	340.277548359211	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205518	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_22871.known	chr12	+	1904	12	FSM	ENSG00000182199.11	ENST00000557433.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_4	334.793781353624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205566	True	NA	34	True	AATAAA	-13	NA	57229758	57234726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231918_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_22872.nic	chr12	-	1231	10	ISM	ENSG00000185482.8	ENST00000332782.7	1645	12	2031	0	-792	0	3prime_fragment	TRUE	canonical	1	2	junction_2	1.85259244450367	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTGTTATTTAACTG	-57249027	True	NA	-5	True	ATTAAA	-17	NA	57249156	57243457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_57243911_57244087_57244226_57244314_57244367_57244536_57244623_57244915_57244966_57245144_57245212_57246803_57246902_57248125_57248199_57248705_57248804_57249040
transcript_22878.known	chr12	+	2797	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_2	78.9716879647384	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	57468934	True	NA	12	True	AATAAA	-22	NA	57488067	57516652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_22895.known	chr12	-	1439	16	FSM	ENSG00000175203.17	ENST00000549394.5	1439	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	213.663494516234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTACTATAACTCTAG	-57539579	True	NA	NA	False	NA	NA	NA	57547120	57530616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538252_57538348_57541363_57541373_57546027_57546097_57547027
transcript_22897.known	chr12	-	1705	15	FSM	ENSG00000175203.17	ENST00000543672.6	1705	15	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	184.105407363304	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	-57539636	True	NA	-3	True	ATTAAA	-17	NA	57547177	57530309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57546027_57546097_57547027
transcript_229.known	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14712	junction_1	3667.11217274574	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
transcript_22900.known	chr12	-	1973	14	FSM	ENSG00000175203.17	ENST00000548249.6	1973	14	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_10	33.5684410821592	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGTCTTGTCTTTACA	-57539651	True	NA	99	True	ATTAAA	-5	NA	57547192	57530050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_22905.known	chr12	-	1527	13	FSM	ENSG00000175203.17	ENST00000550201.5	1527	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.817188374044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTACAACTGTTTCTGA	-57539611	True	NA	-47	True	NA	NA	NA	57547152	57530353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_22906.known	chr12	-	1677	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	146.740417063602	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	-57539683	True	NA	-3	True	ATTAAA	-17	NA	57547224	57530309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
transcript_2291.known	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	16.539514973407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578406	True	NA	99	True	AATAAA	-28	NA	28581857	28578537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
transcript_22912.known	chr12	-	1673	11	FSM	ENSG00000123329.20	ENST00000552953.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.88302643203309	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGCAGTTCCTTTATT	-57476617	False	NA	-8	True	CATAAA	-17	NA	57476641	57472263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476455_57476589
transcript_22918.known	chr12	-	872	4	FSM	ENSG00000175197.13	ENST00000547303.5	872	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.7480157480236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTTACTTTTTCTTCT	-57519988	True	NA	-4	True	ATTAAA	-20	NA	57520492	57516587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517425_57517705_57517754_57520417
transcript_22919.known	chr12	-	903	4	FSM	ENSG00000175197.13	ENST00000346473.8	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.5758369027902	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTCTTTTACTTTTT	-57520010	True	NA	-9	True	ATTAAA	-15	NA	57520514	57516592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517439_57517705_57517754_57520417
transcript_22921.known	chr12	-	644	4	FSM	ENSG00000175197.13	ENST00000547526.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.8859335970941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAACAGGAGAATGAAAG	-57520007	True	NA	NA	False	NA	NA	NA	57520511	57516952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517543_57517705_57517754_57520417
transcript_22923.known	chr12	-	951	3	FSM	ENSG00000175197.13	ENST00000552740.5	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGGAGCATCAGTCC	-57520007	True	NA	NA	False	NA	NA	NA	57520511	57516808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517754_57520417
transcript_22924.known	chr12	+	2460	2	FSM	ENSG00000139269.3	ENST00000266646.3	2460	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTTACAGTCTT	57455006	True	NA	33	True	NA	NA	NA	57455306	57458025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57455835_57456093
transcript_22925.known	chr12	-	1902	14	FSM	ENSG00000175203.17	ENST00000678521.1	1902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.624508713807	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGAGTTTCAAAATAT	-57539681	True	NA	-3	True	AATAAA	-18	NA	57547222	57530152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532808_57532979_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_22927.known	chr12	+	3176	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	18.2452429112053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	57587766	True	NA	10	True	AATAAA	-15	NA	57591191	57603418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_22929.known	chr12	+	1558	9	FSM	ENSG00000166908.18	ENST00000422156.7	1558	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	58.4502994004308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGGGGAAGGGGGTTGT	57587748	True	NA	NA	False	NA	NA	NA	57591173	57601926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_22932.nic	chr12	+	2621	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	40.7171817404998	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604427	True	NA	17	True	AATAAA	-23	NA	57604455	57609800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_22934.known	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.0828891232752	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	57603058	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_22935.nic	chr12	+	2007	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	49.5143076965302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57603058	True	NA	17	True	AATAAA	-23	NA	57604823	57609800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_22936.nic	chr12	+	2121	7	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.429080720771	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604546	True	NA	17	True	AATAAA	-23	NA	57604608	57609800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_2294.known	chr1	-	1800	4	FSM	ENSG00000197989.15	ENST00000481368.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	14.4299072146089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578422	True	NA	99	True	AATAAA	-28	NA	28581873	28578537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579911_28581230_28581589
transcript_22941.known	chr12	+	2067	6	FSM	ENSG00000178498.16	ENST00000548804.5	2067	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	38.4634891813002	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604559	False	NA	17	True	AATAAA	-23	NA	57604621	57609800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_22942.known	chr12	+	1840	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	52.3121400823939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	57603068	True	NA	21	True	AATAAA	-27	NA	57604833	57609804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_22948.nnic	chr12	+	1128	4	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	-31	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	61.2662676809642	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTATGCCACACCCGTT	57604578	False	NA	14	True	AATAAA	-20	NA	57604590	57609797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57606189_57606253_57606442_57606519_57609076
transcript_2295.known	chr1	-	1903	3	FSM	ENSG00000197989.15	ENST00000474814.1	1903	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	-28578420	True	NA	98	True	AATAAA	-27	NA	28581871	28578538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579982_28580559
transcript_22950.known	chr12	+	2091	15	FSM	ENSG00000135506.16	ENST00000389146.10	2091	15	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	126.500060498493	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACCTCTCGGGCAAC	57687156	True	NA	NA	False	NA	NA	NA	57694144	57721024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_22951.known	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	170.349296015749	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687143	True	NA	19	True	AATAAA	-16	NA	57694131	57721557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_22952.known	chr12	+	2457	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	110.777563789123	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687158	True	NA	19	True	AATAAA	-16	NA	57694146	57721557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
transcript_22953.known	chr12	+	2505	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	186.994098568399	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	57687156	True	NA	17	True	AATAAA	-14	NA	57694144	57721555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_2296.known	chr1	-	1359	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	154.175743876915	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACAGGGTACCTTTG	-28639248	True	NA	-8	True	AATAAA	-13	NA	28643005	28603100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
transcript_22979.known	chr12	-	1865	8	FSM	ENSG00000135446.17	ENST00000257904.11	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_5	44.5114064720769	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	-57730187	True	NA	NA	False	AATATA	-15	NA	57752310	57747726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57751499_57751737_57752174
transcript_22987.known	chr12	-	1650	7	FSM	ENSG00000135446.17	ENST00000312990.10	1650	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	493.320270097316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	NA	False	NA	NA	False	AATATA	-15	NA	57752447	57747726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750672_57751296_57751343_57751499_57751737_57752174
transcript_22988.known	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	460.520870560958	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-57730199	True	NA	NA	False	NA	NA	NA	57752322	57748590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
transcript_22992.known	chr12	+	1100	6	FSM	ENSG00000135452.10	ENST00000549052.5	1100	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	70.2839953332194	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCAAGAACTCTTTCCT	57743196	True	NA	NA	False	NA	NA	NA	57745049	57747656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746592_57746721_57747017_57747132_57747215
transcript_23.known	ERCC-00059	+	509	1	FSM	ERCC-00059A	DQ668356	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00059_+_0_500
transcript_230.known	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3392	junction_3	8671.0982291749	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
transcript_23008.known	chr12	+	475	4	FSM	ENSG00000135452.10	ENST00000547472.5	475	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	83.973540806349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGATCCTTCTGACTTT	57743212	True	NA	NA	False	NA	NA	NA	57745065	57747292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57745218_57746588_57746721_57747017_57747132_57747215
transcript_2301.known	chr1	+	1912	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	16.4451951780587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	28666470	True	NA	-10	True	NA	NA	NA	28668779	28714873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_23010.nnic	chr12	-	518	3	NNC	ENSG00000135446.17	novel	1650	7	NA	NA	-10	167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	680.5	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTCTTTTTTTTTTTT	-57730251	True	NA	-20	True	AAGAAA	-1	NA	57752374	57748243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_57748429_57751603_57751737_57752174
transcript_23011.known	chr12	+	1500	2	FSM	ENSG00000255737.2	ENST00000542466.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCACATTTTGCGCTTG	57726158	True	NA	16	True	TATAAA	-28	NA	57726270	57728356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57726379_57726964
transcript_23017.known	chr12	+	2534	7	FSM	ENSG00000123297.20	ENST00000651066.1	2534	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	214.19046560376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAAGCATTGTTTTTT	57777746	True	NA	0	True	ATTAAA	-16	NA	57782789	57797571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57783614_57784171_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23019.known	chr12	+	1218	7	FSM	ENSG00000123297.20	ENST00000323833.12	1218	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	214.433685682907	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	57777732	True	NA	20	True	AATAAA	-22	NA	57782775	57796734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57791964_57792028_57792985_57793074_57796176
transcript_23025.known	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	27.2132320755915	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	57777743	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23026.known	chr12	+	651	6	FSM	ENSG00000123297.20	ENST00000543727.5	651	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	186.642974686968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTAAGCACCTTAAAA	57777755	True	NA	NA	False	NA	NA	NA	57782798	57802631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802554
transcript_23028.known	chr12	+	689	6	FSM	ENSG00000123297.20	ENST00000457189.1	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	184.536825593159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCAGAGTCCCTCAC	57777774	True	NA	NA	False	NA	NA	NA	57782817	57796261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782908_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_2303.known	chr1	+	6358	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	9.87452139799728	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	28666474	True	NA	11	True	AATAAA	-22	NA	28668783	28719353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_23032.known	chr12	-	1378	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_4	23.004347415217	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	-57768289	True	NA	88	True	NA	NA	NA	57772105	57768470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
transcript_23037.known	chr12	+	1935	5	FSM	ENSG00000123297.20	ENST00000540550.6	1935	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	197.614523757744	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	57777717	True	NA	16	True	ATTAAA	-32	NA	57782760	57797587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_23039.known	chr12	+	1085	5	FSM	ENSG00000123297.20	ENST00000651899.1	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	235.990465909113	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATACTGGATTTAGCTT	57777732	True	NA	19	True	AATAAA	-21	NA	57782775	57796733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782878_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_23040.known	chr12	-	1096	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	110.907619215273	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	-57768303	True	NA	-23	True	NA	NA	NA	57772119	57768581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
transcript_23051.known	chr12	-	4785	8	FSM	ENSG00000175215.11	ENST00000398073.7	4785	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	21.7827866885384	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	-57841223	True	NA	-4	True	AATAAA	-28	NA	57846729	57819926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_23052.known	chr12	+	3134	6	FSM	ENSG00000166896.9	ENST00000300145.4	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.19444229944198	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGTCTTCAAATT	NA	False	NA	NA	False	AATAGA	-34	NA	57941566	57959148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57941889_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_23054.nnic	chr12	+	1027	6	NNC	ENSG00000166896.9	novel	3134	6	NA	NA	-9	201	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	26.4272586546543	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTGTTTTTATTACAT	NA	False	NA	14	True	AATAAA	-23	NA	57941557	57957141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_57941780_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_23056.known	chr12	+	519	4	FSM	ENSG00000166896.9	ENST00000549257.5	519	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.3553390593274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAATGACATTTTTATAT	NA	False	NA	NA	False	AATATA	-4	NA	57941795	57956890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57941889_57951757_57951896_57953605_57953690_57956686
transcript_23057.known	chr12	-	2214	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	7.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATATATGTTGATACAA	NA	False	NA	NA	False	AAAACA	-42	NA	57936345	57930114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57931738_57935469_57935554_57935838
transcript_23058.known	chr12	-	451	2	FSM	ENSG00000257698.3	ENST00000551421.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57936079	57931527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57931738_57935838
transcript_23059.known	chr12	-	672	3	FSM	ENSG00000257698.3	ENST00000664635.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACATTTCTTTTTTTCTC	NA	False	NA	71	True	ATTAAA	-1	NA	57936122	57931452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57931738_57935469_57935573_57935838
transcript_23066.nnic	chr12	-	1259	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_2	51.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-59328600	False	NA	-1	True	AGTAAA	-20	NA	59328610	59320075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59326402_59326505_59328356
transcript_23068.nnic	chr12	-	1315	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_2	46	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-59297187	True	NA	-1	True	AGTAAA	-20	NA	59328609	59320075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59326402_59326562_59328356
transcript_23070.nnic	chr12	-	2025	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_2	32	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-59297187	True	NA	-1	True	AGTAAA	-20	NA	59328609	59320075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59326402_59327272_59328356
transcript_23076.nnic	chr12	-	672	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-59297187	True	NA	-9	True	AATAAA	-13	NA	59328609	59321923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59322184_59326402_59326562_59328356
transcript_23079.nnic	chr12	-	1733	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTGCTTTCTTTCT	-59328656	False	NA	0	True	AATATA	-26	NA	59328666	59319555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23082.nnic	chr12	-	1356	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	NA	False	NA	-1	True	AGTAAA	-20	NA	59328809	59320075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23085.nnic	chr12	-	1085	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTTAATGTCAT	-59297187	True	NA	-16	True	ATTAAA	-24	NA	59328609	59320146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23087.nnic	chr12	-	609	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	105	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTTTCTAAAAAAATT	-59328621	False	NA	-18	True	AATAAA	-14	NA	59328631	59321849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59322184_59328356
transcript_23089.nnic	chr12	-	535	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	105	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-59328621	False	NA	-9	True	AATAAA	-13	NA	59328631	59321923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59322184_59328356
transcript_23091.known	chr12	+	11936	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.93907194296653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAAATGAAATCTATA	59595826	True	NA	NA	False	AATAAA	-16	NA	59596028	59789841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
transcript_23092.known	chr12	+	2250	6	FSM	ENSG00000118596.12	ENST00000552432.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.00665927567458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTTATTTTTAAGGT	59595864	True	NA	NA	False	AATAAA	-22	NA	59596066	59780213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_59596237_59655151_59655251_59704791_59705019_59771218_59771363_59774656_59775476_59779422
transcript_23093.known	chr12	-	343	3	FSM	ENSG00000198673.11	ENST00000548541.5	343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCTGCATCTTATG	-62260041	True	NA	NA	False	AATAAA	-15	NA	62260137	62242430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_62242571_62258762_62258843_62260014
transcript_23094.known	chr12	+	14971	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	32.2262410504995	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	62256255	True	NA	NA	False	ATTAAA	-15	NA	62260403	62416389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_23097.known	chr12	+	14950	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	30.9845122601599	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	62256189	True	NA	NA	False	ATTAAA	-15	NA	62260337	62416389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_23098.known	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	58.6138493304555	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	62256248	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
transcript_231.known	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	21619	junction_1	2534.81482996731	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
transcript_23100.known	chr12	+	579	4	FSM	ENSG00000135655.16	ENST00000537297.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	84.1704619606348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAATAATATGGAAAT	62256259	True	NA	NA	False	ATTAAA	-21	NA	62260407	62304896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62304672
transcript_23101.known	chr12	+	648	4	FSM	ENSG00000135655.16	ENST00000548524.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	4.08248290463863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTATGCTTTTG	62256250	True	NA	NA	False	NA	NA	NA	62260398	62315073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789
transcript_23103.known	chr12	+	1022	3	FSM	ENSG00000135655.16	ENST00000551206.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCCCCCGACCCTCC	62256258	True	NA	NA	False	NA	NA	NA	62260406	62303586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789
transcript_23104.known	chr12	+	491	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGAATGGTTTTGTTT	62603750	False	NA	2	True	AATAAA	-15	NA	62603908	62604399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62603900_62604400
transcript_23105.known	chr12	+	645	1	FSM	ENSG00000139239.7	ENST00000484568.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGGCAATCATAAAAAG	62964822	True	NA	NA	False	AAGAAA	-4	NA	62965324	62965969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62965300_62966000
transcript_23108.nic	chr12	+	1684	7	NIC	ENSG00000118600.13	novel	2161	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	43.1534728871527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTAACATGTGATTTT	63779892	True	NA	7	True	AATAAA	-15	NA	63780113	63809100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_63780463_63781018_63781175_63782540_63782705_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_23109.known	chr12	+	1854	6	FSM	ENSG00000118600.13	ENST00000261234.11	1854	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	8.26075057122535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAGGTTTAATTGGCT	63778373	True	NA	90	True	AATAAA	-26	NA	63779908	63809562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_63780130_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_23110.known	chr12	+	1966	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4014084157811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGAGAGGTTTAATT	63779904	True	NA	86	True	AATAAA	-22	NA	63780125	63809558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_23113.known	chr12	-	4159	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCAGACTGCTTTCT	-64221207	True	NA	-8	True	ATTAAA	-17	NA	64222296	64191079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64194659_64215677_64215964_64222002
transcript_23116.known	chr12	-	574	1	FSM	ENSG00000174206.13	ENST00000615991.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCTTCATTGTTTTAA	-64221183	True	NA	NA	False	CATAAA	-17	NA	64222272	64221698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64221700_64222300
transcript_23117.known	chr12	-	2698	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	21.6384431561566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTAAGTGTTTTT	-64221176	True	NA	NA	False	ATTAAA	-15	NA	64222265	64186315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
transcript_23119.known	chr12	-	935	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	6.40312423743285	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293199	True	NA	NA	False	AATAAA	-16	NA	64293383	64266982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_2312.known	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	84.4463587136829	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28727221	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_23121.known	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	1	334	junction_6	176.34010206763	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	64391505	True	NA	15	True	AATAAA	-20	NA	64404391	64451125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
transcript_23127.known	chr12	+	3046	22	FSM	ENSG00000183735.11	ENST00000651014.1	3046	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.2312429048591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTCTTTAATTCTGC	64448481	True	NA	-50	True	ATTAAA	-31	NA	64452141	64502049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64457907_64458019_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23129.known	chr12	+	3092	22	FSM	ENSG00000183735.11	ENST00000652537.1	3092	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	58.2159168142317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTTCTTTAATTCTG	64448431	True	NA	-51	True	ATTAAA	-30	NA	64452091	64502048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23131.known	chr12	+	3022	21	FSM	ENSG00000183735.11	ENST00000331710.10	3022	21	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	14.2302494707577	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	64448459	True	NA	15	True	AATAAA	-21	NA	64452119	64502114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23134.known	chr12	+	2956	21	FSM	ENSG00000183735.11	ENST00000676912.1	2956	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	44.2295150323853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATGTAAAGAGTTC	64448453	True	NA	1	True	AATAAA	-7	NA	64452113	64502100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460246_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23136.known	chr12	+	2869	20	FSM	ENSG00000183735.11	ENST00000678180.1	2869	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	46.8811191758479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	64448462	True	NA	-33	True	NA	NA	NA	64452122	64502066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23137.known	chr12	+	3204	20	FSM	ENSG00000183735.11	ENST00000676654.1	3204	20	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	14.3685174471415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTAATTCTGCTTAC	64448429	True	NA	-46	True	ATTAAA	-35	NA	64452089	64502053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64498040_64501329
transcript_23140.known	chr12	+	1261	4	FSM	ENSG00000183735.11	ENST00000678430.1	1261	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	13.8804418757713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGCAAGAATATGGAG	64448459	True	NA	NA	False	AAAACA	-2	NA	64452119	64465267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333
transcript_23142.known	chr12	+	1075	2	FSM	ENSG00000183735.11	ENST00000679065.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTGTTTAGATTCAAT	64448468	True	NA	NA	False	ATTAAA	-14	NA	64452128	64456855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839
transcript_23145.known	chr12	-	1977	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.31476308670584	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTGGAGGTGATCT	-65121185	False	NA	NA	False	AATAAA	-22	NA	65121305	65050625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_2315.nnic	chr1	+	638	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	-116	12	combination_of_known_splicesites	FALSE	canonical	3	74	junction_3	464.271711632555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAACTAAACA	28736191	True	NA	NA	False	AATGAA	-9	NA	28736823	28769137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_23151.known	chr12	-	1303	8	FSM	ENSG00000155957.19	ENST00000545407.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	283.029240574906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAATACTGTTACAAT	-66164660	True	NA	-25	True	AATAAA	-12	NA	66169980	66137841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914_66169354_66169854
transcript_23153.known	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	239.275817137183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-66164679	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_23154.known	chr12	-	876	7	FSM	ENSG00000155957.19	ENST00000633367.1	876	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	233.643365457319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATACTGTTACAATCTT	-66164707	True	NA	-22	True	AATAAA	-15	NA	66170027	66137838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153411_66169854
transcript_23155.known	chr12	-	2876	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	49.421374143403	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCACATCTTGCA	-66164676	True	NA	NA	False	NA	NA	NA	66169996	66135845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_23158.known	chr12	-	2240	7	FSM	ENSG00000155957.19	ENST00000544599.5	2240	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	236.193952787393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTATGGTTTCATTTG	-66164191	False	NA	-2	True	ATTAAA	-15	NA	66169511	66136936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914
transcript_2316.nnic	chr1	+	1300	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	-140	0	intron_retention	FALSE	canonical	3	74	junction_3	464.271711632555	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28733140	True	NA	22	True	AATAAA	-23	NA	28736799	28769775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_23163.known	chr12	-	1177	3	FSM	ENSG00000139233.7	ENST00000446587.2	1177	3	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_2	351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAATTAGCCGGGCA	-66121684	True	NA	NA	False	AATACA	-23	NA	66130702	66123306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66124019_66128895_66129114_66130455
transcript_23164.known	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_2	65	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-66121732	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66124019_66128895_66129114_66130704
transcript_23169.known	chr12	-	220	2	FSM	ENSG00000155957.19	ENST00000542072.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCCGCCCTGTCTGGGA	-66164669	True	NA	NA	False	NA	NA	NA	66169989	66161087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66161173_66169854
transcript_23170.known	chr12	-	851	9	NNC	ENSG00000155957.19	novel	989	8	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	312.903913965613	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTACAATCTTTATTT	-66164643	True	NA	-17	True	AATAAA	-20	NA	66169963	66137833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_66138055_66138055_66138166_66138723_66138743_66138744_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_23171.known	chr12	-	844	6	FSM	ENSG00000155957.19	ENST00000398033.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	261.687294303717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTACAATCTTTATTT	-66164678	True	NA	-17	True	AATAAA	-20	NA	66169998	66137833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_23172.known	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_6	102.473316586538	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	67256614	True	NA	4	True	AATAAA	-16	NA	67269357	67319953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
transcript_23174.known	chr12	-	2472	14	FSM	ENSG00000111554.15	ENST00000411698.6	2472	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.2647519739991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATTTGTTGTTCCT	-68330980	True	NA	NA	False	NA	NA	NA	68332286	68294862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68326656_68327022_68331106_68331222_68332227
transcript_23175.known	chr12	-	2918	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	9.65928440144139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTCTCCAGAAAG	-68331026	True	NA	-3	True	AATAAA	-14	NA	68332332	68294567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_2318.nic	chr1	+	1924	4	NIC	ENSG00000198492.16	novel	358	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	514.372973197033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAAGA	28737710	False	NA	NA	False	NA	NA	NA	28737734	28769125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737798_28738258_28738339_28742402_28743987_28768928
transcript_23181.known	chr12	-	2170	3	FSM	ENSG00000111554.15	ENST00000430606.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTATTCTAAAATGT	-68331075	True	NA	-13	True	ATTAAA	-12	NA	68332381	68325120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68327022_68331106_68331222_68332227
transcript_23183.known	chr12	-	2718	3	FSM	ENSG00000111554.15	ENST00000393543.7	2718	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATACGTAATTTTGT	-68331018	True	NA	NA	False	AATAAA	-22	NA	68332324	68325004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68327511_68331106_68331222_68332227
transcript_23184.known	chr12	+	1072	9	FSM	ENSG00000127314.18	ENST00000537460.5	1072	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	292.861928858976	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCACATTCTAATCAC	68602551	True	NA	NA	False	NA	NA	NA	68610907	68659401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611044_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23185.known	chr12	+	13378	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	64.7598389026245	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATGACTGTATTATT	68602542	True	NA	NA	False	AATAAA	-23	NA	68610898	68671901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23188.known	chr12	+	2049	8	FSM	ENSG00000127314.18	ENST00000393436.9	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	186.805475600384	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGCCACTTGAATGTG	68602501	True	NA	30	True	AATAAA	-33	NA	68610857	68660522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611053_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23189.known	chr12	+	1060	7	FSM	ENSG00000127314.18	ENST00000542145.5	1060	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	247.632400052084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCGCTTTGATTAA	68602572	True	NA	NA	False	AAGAAA	-23	NA	68610928	68659754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68656305_68656450_68657100_68657218_68659279
transcript_2319.nic	chr1	+	2574	4	NIC	ENSG00000198492.16	novel	358	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	514.372973197033	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28737710	False	NA	22	True	AATAAA	-23	NA	28737734	28769775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737798_28738258_28738339_28742402_28743987_28768928
transcript_23190.known	chr12	+	977	6	FSM	ENSG00000127314.18	ENST00000539091.5	977	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	308.844556371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCCAAAGAGCTCCTAT	68602572	True	NA	NA	False	AATAAA	-3	NA	68610928	68659647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611053_68648698_68648782_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_232.known	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	22297	junction_2	2503	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_10819_11031_11109_11205
transcript_2320.nic	chr1	+	2569	4	NIC	ENSG00000198492.16	novel	657	3	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	523.271970924829	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28737335	True	NA	22	True	AATAAA	-23	NA	28737771	28769775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737830_28738258_28738339_28742402_28743987_28768928
transcript_23202.known	chr12	+	6213	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_9	64.5184972572997	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	68676200	True	NA	NA	False	AATAAA	-14	NA	68686977	68745809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_23209.known	chr12	+	2859	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	175.167412494448	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	68676173	True	NA	29	True	AATAAA	-40	NA	68686950	68742692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_23213.nic	chr12	+	1654	11	ISM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	28314	0	0	5prime_fragment	TRUE	canonical	3	715	junction_9	61.3820820761238	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTCTTAACAGCTTA	68676173	True	NA	NA	False	AAAAAG	-19	NA	68686950	68714378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729
transcript_23224.known	chr12	+	573	3	FSM	ENSG00000111581.10	ENST00000540453.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCATGCCTATAATCTC	68676193	True	NA	NA	False	AATATA	-32	NA	68686970	68689910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68687074_68688961_68689054_68689532
transcript_23226.known	chr12	-	1733	3	FSM	ENSG00000247363.3	ENST00000500695.2	1733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTATTTCTGTCATAAAA	-68686706	True	NA	NA	False	AATAAA	-16	NA	68686859	68674370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68675822_68685858_68686018_68686736
transcript_23227.known	chr12	+	3728	5	FSM	ENSG00000175782.11	ENST00000319429.7	3728	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	54.2102388852881	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTGGGAAGATCCT	68742934	True	NA	NA	False	AATAAA	-18	NA	68746134	68762769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68760039
transcript_23229.known	chr12	+	17722	5	FSM	ENSG00000175782.11	ENST00000398004.4	17722	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	14.4913767461894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTCTTTCATTAAT	68742975	True	NA	NA	False	AATAAA	-17	NA	68746175	68781468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68764703
transcript_2323.known	chr1	-	2300	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	61.8721261958889	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	-29168801	True	NA	-5	True	AATAAA	-22	NA	29181900	29147742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_23233.nic	chr12	+	1232	5	NIC	ENSG00000175782.11	novel	3522	5	NA	NA	-13	-2578	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	66.015149776396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATGAAGTTATATGTT	68742911	True	NA	NA	False	AAAAAG	-7	NA	68746111	68760191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68760039
transcript_23234.known	chr12	+	3522	5	FSM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	72.1023577977863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTTCTGCTTTTCAT	68742924	True	NA	NA	False	AATACA	-35	NA	68746124	68767158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68764703
transcript_23235.nic	chr12	+	1501	4	ISM	ENSG00000175782.11	ENST00000319429.7	3728	5	-24	3051	-14	-3051	5prime_fragment	FALSE	canonical	3	126	junction_1	16.6799946709291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATGAACTGAGGAAGT	68742910	True	NA	NA	False	NA	NA	NA	68746110	68759718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156
transcript_23236.nic	chr12	+	1960	4	ISM	ENSG00000175782.11	ENST00000319429.7	3728	5	-10	2578	0	-2578	intron_retention	FALSE	canonical	3	126	junction_1	16.6799946709291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATGAAGTTATATGTT	68742924	True	NA	NA	False	AAAAAG	-7	NA	68746124	68760191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156
transcript_23237.nic	chr12	+	1559	4	ISM	ENSG00000175782.11	ENST00000674096.1	3522	5	-13	7440	-13	-3051	5prime_fragment	FALSE	canonical	3	6	junction_1	73.5572339519824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATGAACTGAGGAAGT	68742911	True	NA	NA	False	NA	NA	NA	68746111	68759718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156
transcript_23241.known	chr12	+	7490	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	9.47048045243746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGAGGAGTGGTACT	68798453	True	NA	NA	False	AATGAA	-19	NA	68808176	68845544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_23242.known	chr12	+	406	2	FSM	ENSG00000135679.27	ENST00000400501.2	406	2	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGATCTTAAATTTTT	68843665	False	NA	32	True	AATAAA	-28	NA	68843688	68844195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68843833_68843933
transcript_23243.known	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	420.407944739392	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222276	True	NA	17	True	AATAAA	-14	NA	69239615	69269939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_2325.known	chr1	-	1264	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	263.705801983953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGTGTCAAAGGAGCG	-29168783	True	NA	NA	False	NA	NA	NA	29181882	29148670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_23262.known	chr12	+	6584	10	FSM	ENSG00000111605.18	ENST00000435070.7	6584	10	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_5	82.4034039809905	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTCTTTTTT	69222229	True	NA	15	True	AATAAA	-18	NA	69239568	69274358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_23272.known	chr12	+	234	4	FSM	ENSG00000111605.18	ENST00000551516.1	234	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	564.053385968227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTTTGCTTCTTGTG	69222302	True	NA	-87	True	AAAACA	-29	NA	69239641	69269573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251142_69262468_69262563_69269511
transcript_23275.nic	chr12	+	1578	8	NIC	ENSG00000127337.7	novel	1468	7	NA	NA	-28	-74	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	133.558822934591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCCTCCTGATGTGTT	69354375	True	NA	9	True	AATAAA	-19	NA	69359681	69390796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_69360024_69362787_69362908_69364176_69364300_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_23276.known	chr12	+	1468	7	FSM	ENSG00000127337.7	ENST00000247843.7	1468	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	22.544400635191	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATTGTGACATCACATC	69354436	True	NA	83	True	AATACA	-16	NA	69359742	69390870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69360024_69362787_69362908_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_23278.known	chr12	+	1100	5	FSM	ENSG00000127337.7	ENST00000548020.5	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	129.615537263092	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATAAAGTATTACTTGT	69354403	True	NA	NA	False	NA	NA	NA	69359709	69390631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69360024_69362787_69362908_69370705_69370799_69370887_69370976_69390146
transcript_23279.known	chr12	+	6768	9	FSM	ENSG00000166225.9	ENST00000549921.6	6768	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	19.8049078513383	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTGTATTTATATTT	69468149	True	NA	30	True	AATAAA	-38	NA	69470387	69579793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69470531_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
transcript_23285.known	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	2057	junction_8	191.891172861657	4813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	69555145	True	NA	30	True	AATAAA	-15	NA	69585458	69601570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_23286.known	chr12	+	1728	15	FSM	ENSG00000166226.13	ENST00000544368.6	1728	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	650.051116514411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTCTCATACTGTGC	69555146	True	NA	-15	True	TTTAAA	-4	NA	69585459	69601525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69601294
transcript_23287.nic	chr12	+	1975	16	ISM	ENSG00000166268.11	ENST00000552032.7	3590	25	71788	374	-29560	0	3prime_fragment	FALSE	canonical	1	2	junction_6	6.0977227078822	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGATGTTTGATT	69896888	True	NA	NA	False	AATAAA	-18	NA	69897014	69958723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_69897247_69903643_69903845_69909968_69910078_69910820_69910931_69926570_69926735_69927684_69927749_69932512_69932599_69936112_69936188_69936282_69936336_69936452_69936633_69952112_69952176_69952798_69952887_69955362_69955438_69957821_69957943_69958248_69958324_69958444
transcript_23298.known	chr12	+	9333	11	FSM	ENSG00000127328.22	ENST00000247833.12	9333	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	26.431799030713	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTATCTACATCCT	69734891	True	NA	14	True	AATAAA	-19	NA	69738859	69823199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_233.known	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6001_+_0_6000
transcript_23303.known	chr12	+	1755	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	60.0754669427967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734893	True	NA	14	True	AATAAA	-15	NA	69738861	69815723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
transcript_23305.known	chr12	+	1613	9	FSM	ENSG00000127328.22	ENST00000417413.7	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	64.9591217613046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734893	True	NA	14	True	AATAAA	-15	NA	69738861	69815723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69812777_69812878_69812963_69813034_69815363
transcript_23306.known	chr12	+	2840	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	49.1221373211712	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	69778566	True	NA	NA	False	AAAAAG	-15	NA	69778949	69817181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_23307.known	chr12	+	2674	9	FSM	ENSG00000127328.22	ENST00000553099.5	2674	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	62.6313619522999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATACTGTACGGTTTG	69778583	True	NA	NA	False	AATAAA	-16	NA	69778966	69817117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69779097_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_23317.nic	chr12	+	1033	4	ISM	ENSG00000127328.22	ENST00000378815.10	2386	6	-31	11631	-29	0	5prime_fragment	FALSE	canonical	3	128	junction_3	18.263503375737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATCAGATTATTTAAA	69734862	True	NA	NA	False	AATAAA	-17	NA	69738830	69785016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719
transcript_23319.nic	chr12	-	776	3	FSM	ENSG00000257815.8	ENST00000686072.1	834	3	38	20	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-70242645	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_70242894_70243065_70243205_70243311
transcript_23321.known	chr12	-	452	2	FSM	ENSG00000257815.8	ENST00000553135.2	683	2	28	203	2	0	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-70242643	True	NA	NA	False	ATTAAA	-20	NA	70243358	70242488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_70242894_70243311
transcript_23322.known	chr12	-	883	2	FSM	ENSG00000257815.8	ENST00000549651.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-70242645	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_70242894_70243065
transcript_2333.nic	chr1	-	1463	11	NIC	ENSG00000116353.16	novel	2515	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	146.035920238823	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	-29227292	True	NA	-2	True	AATAAA	-24	NA	29230958	29193816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29220837_29220922_29230730
transcript_23339.known	chr12	+	2844	16	FSM	ENSG00000111596.14	ENST00000229195.8	2844	16	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	47.8230999506399	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	70234257	True	NA	11	True	AATAAA	-19	NA	70243432	70354993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_23353.nic	chr12	+	1825	13	NIC	ENSG00000111596.14	novel	2844	16	NA	NA	-31	0	intron_retention	FALSE	canonical	3	40	junction_4	150.435732863646	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTT	70242951	False	NA	NA	False	NA	NA	NA	70242970	70353923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_23362.known	chr12	+	4717	3	FSM	ENSG00000135643.5	ENST00000258111.5	4717	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	9	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTGTGTGGCATT	70365809	True	NA	15	True	AATAAA	-15	NA	70366289	70434292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_70367071_70400208_70400337_70430484
transcript_23365.nnic	chr12	-	1660	5	NNC	ENSG00000153233.13	novel	1927	5	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGTAAAGCATATTCT	-70664701	True	NA	NA	False	AATAAA	-15	NA	70664727	70638078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_70639278_70656703_70656818_70660939_70661098_70662494_70662606_70664649
transcript_23368.nnic	chr12	-	645	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-265	-62814	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	61.8079462708657	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	-71117117	True	NA	-6	True	AATAAA	-17	NA	71118512	71110215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110454_71115849_71115959_71118069_71118187_71118331
transcript_23373.known	chr12	-	565	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	79.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	-71116852	False	NA	-3	True	AATAAA	-20	NA	71118247	71047401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_71047680_71115849_71115959_71118069
transcript_23375.nnic	chr12	-	814	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-343	-62812	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	76.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTCCGTGTGACCTC	NA	False	NA	-4	True	AATAAA	-19	NA	71118590	71110213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110454_71115905_71115959_71118069
transcript_23376.nnic	chr12	-	868	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-343	-62814	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	33	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118590	71110215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110454_71115849_71115959_71118069
transcript_23378.nnic	chr12	-	1085	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-343	-62814	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	76.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118590	71110215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110671_71115849_71115959_71118069
transcript_23383.nic	chr12	+	1371	8	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	43.6755196924795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	71685227	True	NA	NA	False	AATAAA	-19	NA	71686091	71704056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_71686321_71686659_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_23385.nnic	chr12	+	2538	7	NNC	ENSG00000139291.14	novel	5662	6	NA	NA	-15	-2011	intron_retention	FALSE	canonical	0	0	junction_6	40.6478781734053	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGATTTCTGTACC	NA	False	NA	23	True	ACTAAA	-17	NA	71686066	71702045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71701015
transcript_23386.nic	chr12	+	1588	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_6	40.6478781734053	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71686066	71704056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_23387.nic	chr12	+	1735	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	17	junction_6	34.4270565431061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71686066	71704056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_2339.known	chr1	-	2515	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_9	38.6353640855718	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTCTCCCTTATCA	-29227268	True	NA	NA	False	NA	NA	NA	29230934	29192656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
transcript_23390.known	chr12	+	5662	6	FSM	ENSG00000139291.14	ENST00000266673.10	5662	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	7.7614431647729	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTACCTGAATTTCT	71685217	True	NA	NA	False	AATACA	-14	NA	71686081	71705047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831
transcript_23391.known	chr12	+	4432	3	FSM	ENSG00000173451.7	ENST00000308086.3	4432	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCATGCCTGTTATT	71663565	True	NA	8	True	ATTAAA	-19	NA	71664300	71680644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71664581_71674202_71674399_71676688
transcript_23395.known	chr12	+	672	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	71664469	False	NA	NA	False	ATTAAA	-21	NA	71664480	71665440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71664581_71664868
transcript_23396.known	chr12	-	7037	35	FSM	ENSG00000133858.17	ENST00000378743.9	7037	35	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_24	13.2282661079014	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTGTCTTTATTCAC	-71662877	True	NA	-2	True	AATATA	-18	NA	71663848	71609598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_71610566_71610694_71610758_71611057_71611098_71611785_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_234.known	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1868.58798026745	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
transcript_2340.known	chr1	-	2416	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	106.842678853964	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTAATGCTGTAAAGA	-29227258	True	NA	-4	True	ATTAAA	-22	NA	29230924	29192872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
transcript_23401.known	chr12	+	3157	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	19.1978799285234	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	71837690	True	NA	4	True	AATAAA	-13	NA	71839758	71924313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_23407.known	chr12	+	1995	16	FSM	ENSG00000121749.16	ENST00000462788.6	1995	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	33.8037473267881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATTTTTGTAGTTAC	71837690	True	NA	8	True	ATTAAA	-19	NA	71839758	71923362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_23411.known	chr12	-	3088	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTAAGTGTGTGTCTG	-72272217	False	NA	NA	False	AATAAA	-3	NA	72272236	72259576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_72262111_72264481_72264622_72271822
transcript_23412.known	chr12	-	1209	2	FSM	ENSG00000180881.20	ENST00000548958.2	1209	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTTGGGTATTTCT	-75390376	True	NA	NA	False	ATTAAA	-20	NA	75390910	75359883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_75361020_75390837
transcript_23414.nnic	chr12	+	468	4	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-38	-147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.6220236220354	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTATCATCACTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	75366898	75370237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_75367014_75369476_75369650_75369959_75369987_75370084
transcript_23415.nnic	chr12	+	615	4	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.6220236220354	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCCATATGTGTATC	NA	False	NA	NA	False	AATAAA	-22	NA	75366898	75370384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_75367014_75369476_75369650_75369959_75369987_75370084
transcript_23416.nnic	chr12	+	594	3	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-38	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATATGTGTATCAAAAGT	NA	False	NA	NA	False	AATAAA	-28	NA	75366898	75370390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_75367014_75369476_75369650_75370084
transcript_23417.known	chr12	+	484	2	FSM	ENSG00000173401.10	ENST00000548623.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATATGTGTATCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	75366832	75370387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_75367014_75370084
transcript_23418.known	chr12	+	404	3	FSM	ENSG00000173401.10	ENST00000547144.1	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCCATATGTGTATC	75366439	True	NA	NA	False	AATAAA	-22	NA	75366936	75370384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_75367014_75369959_75369987_75370084
transcript_23419.nnic	chr12	-	1459	11	NNC	ENSG00000111615.14	novel	10104	10	NA	NA	-1	780	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	65.3287073192176	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATGTGAATGAGGTTG	-75505914	True	NA	NA	False	AATAGA	-33	NA	75511637	75499028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_75499036_75499542_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_23421.known	chr12	-	10104	10	FSM	ENSG00000111615.14	ENST00000229214.9	10104	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_9	14.8099065943487	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTCTTCCACTTTGT	-75505886	True	NA	NA	False	AATAAA	-14	NA	75511609	75490862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_23434.known	chr12	-	975	9	FSM	ENSG00000111615.14	ENST00000438169.6	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	72.8173013438427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACCCAAAACTCCTTGAC	-75505874	True	NA	31	True	AAAAAG	-16	NA	75511597	75499808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_23436.known	chr12	-	5913	2	FSM	ENSG00000139289.14	ENST00000619060.1	5913	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACCTTTTGAAGGC	-76031753	False	NA	-15	True	AATAAA	-22	NA	76031776	76025446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76030093_76030509
transcript_23441.known	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	464.707774365305	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	-76046209	True	NA	51	True	NA	NA	NA	76084666	76047154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23444.nic	chr12	-	1710	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	-45	168	combination_of_known_junctions	FALSE	canonical	3	501	junction_1	551.520661444338	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAAAATCTTAAGTGA	-76084763	False	NA	NA	False	AAAAAG	-1	NA	76084780	76047426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23457.nic	chr12	-	1531	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	501	junction_1	551.520661444338	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTCTTACAAGATAA	-76084753	False	NA	-18	True	AATAAA	-15	NA	76084770	76047595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23460.known	chr12	-	13159	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_9	366.031698192428	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTACATGTCTTTAA	-76046228	True	NA	NA	False	ATTAAA	-19	NA	76084685	76036584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_2350.known	chr1	-	571	4	FSM	ENSG00000116353.16	ENST00000483435.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	38.5082963644055	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	NA	False	NA	-2	True	AATAAA	-24	NA	29200589	29193816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515
transcript_23501.known	chr12	-	1686	14	FSM	ENSG00000187109.15	ENST00000535020.6	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	671.479405280591	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCGTGCTTTTTATA	-76046155	True	NA	NA	False	AAAACA	-13	NA	76084612	76048994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23508.known	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	690.088883164094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	-76046272	True	NA	6	True	NA	NA	NA	76084729	76047631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
transcript_2352.known	chr1	-	2177	8	FSM	ENSG00000162511.8	ENST00000294507.4	2177	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.59078981795143	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGATGTGTTTCT	-30757760	True	NA	-7	True	AATAAA	-16	NA	30757774	30732468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30733918_30735172_30735266_30737603_30737700_30738939_30739063_30739808_30739938_30741639_30741717_30742455_30742550_30757658
transcript_23525.known	chr12	-	1838	13	FSM	ENSG00000187109.15	ENST00000549596.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_7	391.066170871376	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTTGAATATCAAG	-76046228	True	NA	NA	False	ATTAAA	-24	NA	76084685	76049145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23528.known	chr12	-	1597	12	FSM	ENSG00000187109.15	ENST00000544816.5	1597	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	739.542856340075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGGCAAGAC	-76046274	True	NA	12	True	NA	NA	NA	76084731	76047966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76084566
transcript_23536.known	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	739.088560881878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	-76046209	True	NA	-32	True	AAAACA	-44	NA	76084666	76049588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_23553.known	chr12	-	1074	10	FSM	ENSG00000187109.15	ENST00000551992.5	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_9	752.157555073617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAATGTCACTTTGAA	-76084077	False	NA	11	True	AATAGA	-45	NA	76084094	76053328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76083832
transcript_23562.known	chr12	-	3568	2	FSM	ENSG00000179941.9	ENST00000650064.2	3568	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCATTTTTTTT	-76346293	True	NA	NA	False	AATGAA	-17	NA	76348415	76344473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76347788_76348161
transcript_23565.nnic	chr12	+	616	4	NNC	ENSG00000257526.2	novel	386	3	NA	NA	-2427	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTAGTTCTT	76559713	True	NA	NA	False	ATTAAA	-21	NA	76559866	76615431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_76560234_76562294_76562359_76570710_76570767_76615302
transcript_23568.known	chr12	-	910	7	FSM	ENSG00000175183.10	ENST00000552330.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	736.274273321807	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	-76853654	True	NA	NA	False	NA	NA	NA	76878991	76858828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76862809_76862960_76863175_76863345_76866148_76866262_76878937
transcript_23580.known	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	1484	junction_5	67.5988165576884	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-76853682	True	NA	-15	True	AATAAA	-19	NA	76879019	76858708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_23581.known	chr12	-	754	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	607.896043744323	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCTGTACTTGGATA	-76853686	True	NA	NA	False	ACTAAA	-35	NA	76879023	76858841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
transcript_23588.known	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	12.8471786786049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	78855903	True	NA	13	True	AATAAA	-21	NA	78864773	79452008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_23589.nic	chr12	+	1023	6	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	724	158209	-57	-4054	internal_fragment	FALSE	canonical	3	104	junction_2	11.9264412127005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGAAACTGGGAAA	78855846	True	NA	29	True	AAAAAG	-12	NA	78864716	79292070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007
transcript_2359.known	chr1	-	5385	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_5	72.2747968416612	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052355	True	NA	-2	True	AATACA	-16	NA	31065717	30931505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_23591.nic	chr12	+	1001	4	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	724	232368	-57	394	internal_fragment	FALSE	canonical	3	104	junction_2	14.8174071805952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCAGCTTGTATTTAAT	78855846	True	NA	NA	False	CATAAA	-29	NA	78864716	79217911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502
transcript_23603.known	chr12	+	567	3	FSM	ENSG00000257474.5	ENST00000552167.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	79545435	True	NA	29	True	AATAGA	-34	NA	79545529	79550535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_79545559_79546065_79546177_79550108
transcript_23605.known	chr12	-	8991	7	FSM	ENSG00000177425.11	ENST00000328827.9	8991	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	267.416497870519	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTTTTGTATGTG	-79685214	True	NA	-5	True	AATAAA	-19	NA	79690964	79584878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
transcript_23607.known	chr12	-	2925	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_12	77.6252448559191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGCAAGT	-79934917	False	NA	NA	False	NA	NA	NA	79934931	79775928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23610.nic	chr12	-	2425	16	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	261	22924	-69	0	internal_fragment	FALSE	canonical	3	243	junction_4	74.7161740633624	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAACAAGAAAATGAAGA	-79935185	False	NA	NA	False	AAAACA	-28	NA	79935199	79797329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23611.nic	chr12	-	2257	15	ISM	ENSG00000058272.19	ENST00000550107.5	2925	24	-268	21401	-69	0	5prime_fragment	FALSE	canonical	3	169	junction_3	83.3314013381486	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAACAAGAAAATGAAGA	-79935185	False	NA	NA	False	AAAACA	-28	NA	79935199	79797329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23612.nic	chr12	-	1300	8	ISM	ENSG00000058272.19	ENST00000547330.5	2275	15	-69	23622	-69	256	5prime_fragment	FALSE	canonical	3	388	junction_1	39.3643369105611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGGAAAGAAGGA	-79935185	False	NA	-40	True	AAGAAA	-12	NA	79935199	79820855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23615.nic	chr12	-	2880	5	ISM	ENSG00000058272.19	ENST00000550510.5	631	6	-327	5231	55	1785	5prime_fragment	FALSE	canonical	3	439	junction_1	27.3895509273153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCCGAAACAATTGTG	-79935028	False	NA	NA	False	NA	NA	NA	79935042	79826342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23616.nnic	chr12	+	1444	2	NIC	ENSG00000257557.2	novel	3234	3	NA	NA	363	-1302	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTATAACAGTAATT	79935044	True	NA	NA	False	NA	NA	NA	79935263	79941410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_79935659_79940361
transcript_23618.nic	chr12	+	774	2	ISM	ENSG00000111046.4	ENST00000228641.4	1329	3	840	0	840	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGGTCCTAATTTGA	80708448	True	NA	NA	False	ATTAAA	-19	NA	80708473	80709474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_80708615_80708841
transcript_23619.known	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.08949936646267	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	-80937800	True	NA	3	True	AGTAAA	-17	NA	80937934	80792519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
transcript_23626.known	chr12	+	8391	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	10.4656050417015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	81076544	True	NA	NA	False	AATAAA	-21	NA	81078078	81261210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
transcript_23630.nic	chr12	+	1608	8	ISM	ENSG00000111058.8	ENST00000548058.6	8391	16	-70	86025	-48	-24637	5prime_fragment	FALSE	canonical	3	66	junction_7	4.65547735337152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTGTTATATTTTCC	81077996	False	NA	NA	False	TTTAAA	-2	NA	81078008	81175185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787
transcript_23634.known	chr12	-	1585	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	53.0471488394994	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTGAAATTGCATTA	-82348783	True	NA	NA	False	AATAAA	-21	NA	82358387	82352302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
transcript_23635.known	chr12	-	984	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	122.335603975294	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAATCAGAGCTATCA	-82357903	True	NA	NA	False	AATAAA	-11	NA	82358786	82352846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
transcript_23638.nic	chr12	-	527	3	ISM	ENSG00000133773.12	ENST00000256151.8	1585	4	-22	2262	0	-1718	5prime_fragment	FALSE	canonical	3	435	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACATCAAATCAAAAAG	-82348805	True	NA	NA	False	AATAAA	-3	NA	82358409	82354564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_82354595_82356959_82357270_82358222
transcript_2364.known	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_3	116.998364449896	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-31286230	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
transcript_23640.known	chr12	-	600	2	FSM	ENSG00000133773.12	ENST00000552606.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAGTCACGGTTTAAT	-82348805	True	NA	74	True	NA	NA	NA	82358409	82356856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82357270_82358222
transcript_23641.known	chr12	-	553	2	FSM	ENSG00000133773.12	ENST00000547758.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATTAGGGAAACATTT	-82357922	False	NA	87	True	NA	NA	NA	82358805	82356843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82357270_82358678
transcript_23643.known	chr12	+	2064	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.28837802627236	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGACCTACATTCCTGA	82357851	True	NA	79	True	AATAAA	-28	NA	82358528	82479239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_23647.nnic	chr12	+	1855	10	NIC	ENSG00000127720.8	novel	2064	12	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	11.7136619612831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATAATCCATTTTT	82357819	True	NA	6	True	AATAAA	-17	NA	82358496	82479166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82476643_82476719_82477280_82477353_82478931
transcript_23650.known	chr12	+	743	4	FSM	ENSG00000127720.8	ENST00000548200.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAAAAGAAAG	82357862	True	NA	NA	False	NA	NA	NA	82358539	82398980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794
transcript_23651.nic	chr12	+	1417	2	ISM	ENSG00000179104.9	ENST00000548305.5	2682	6	-181	108395	-60	-108395	5prime_fragment	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAAGTGATTGTTGGC	NA	False	NA	7	True	AATAAA	-22	NA	82686819	82857576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_82687670_82857009
transcript_23652.nnic	chr12	-	1608	2	Antisense	novelGene_ENSG00000257296.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTATATGCTATATCT	-84689314	True	NA	0	True	AATAAA	-18	NA	84689797	84665196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_84666620_84689612
transcript_23654.nnic	chr12	-	770	2	Antisense	novelGene_ENSG00000257296.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGCTCATGTTTTCA	-84689314	True	NA	NA	False	AATAAA	-26	NA	84689797	84666034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_84666620_84689612
transcript_23656.known	chr12	-	4821	13	FSM	ENSG00000072041.18	ENST00000681721.1	4821	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	72.9274753893666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTAAGGTGTACAATAT	NA	False	NA	NA	False	AATAAA	-5	NA	84913629	84859504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522_84912706_84913499
transcript_23657.known	chr12	-	4799	12	FSM	ENSG00000072041.18	ENST00000266682.10	4799	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	70.380077947533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	-84910087	True	NA	NA	False	AATAAA	-19	NA	84912799	84859490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_23660.known	chr12	-	4312	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	24.8130510014387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	-84912864	False	NA	-1	True	AATAAA	-22	NA	84912876	84880844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_23662.known	chr12	-	4098	4	FSM	ENSG00000072041.18	ENST00000681281.1	4098	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	27.2559881290128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCGAATTGTTCAATTG	-84910058	True	NA	-15	True	ACTAAA	-2	NA	84912770	84882346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84885562_84885910_84886069_84891831_84892309_84912522
transcript_23664.known	chr12	-	1831	2	FSM	ENSG00000072041.18	ENST00000681628.1	1831	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTAATCTACAAACCCT	-84910127	True	NA	NA	False	NA	NA	NA	84912839	84890794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84892309_84912522
transcript_23665.known	chr12	-	3307	2	FSM	ENSG00000072041.18	ENST00000680067.1	3307	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCAAGGAATATCATAC	-84910051	True	NA	NA	False	AATATA	-9	NA	84912763	84908937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84912004_84912522
transcript_23666.known	chr12	+	1332	4	FSM	ENSG00000180318.4	ENST00000316824.4	1332	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGTTATAGATTGAT	85280166	True	NA	NA	False	AATAAA	-14	NA	85280219	85301784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_85280488_85283571_85283877_85286852_85286982_85301154
transcript_23668.known	chr12	-	5515	2	FSM	ENSG00000198774.5	ENST00000361228.5	5515	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATATTGTTTTGGGT	-85836364	True	NA	NA	False	AATAAA	-19	NA	85836409	85800702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_85805963_85836154
transcript_23669.known	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	9.41629792788369	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	85867913	True	NA	10	True	AATAAA	-24	NA	85874294	85882992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
transcript_23670.known	chr12	-	1937	6	FSM	ENSG00000182050.14	ENST00000552808.7	1894	6	0	-43	0	43	multi-exon	FALSE	canonical	0	0	junction_5	7.98999374217527	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAATATGAAAGATTTTA	NA	False	NA	NA	False	TTTAAA	-37	NA	86256305	85979012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_85980431_85983522_85983671_85989399_85989553_86028103_86028205_86049673_86049724_86256238
transcript_23673.known	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	23.3339285638364	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	88032070	True	NA	10	True	AATAAA	-18	NA	88035535	88050160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_23676.known	chr12	-	1169	7	FSM	ENSG00000198707.17	ENST00000676331.1	1169	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	4.2328083664001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGATAATTAGTATTCT	-88141001	True	NA	NA	False	NA	NA	NA	88142099	88130717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23677.known	chr12	+	2740	6	FSM	ENSG00000133641.18	ENST00000550333.5	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	83.0339689524715	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGTCTGAATTTTT	88032039	True	NA	8	True	AATAAA	-16	NA	88035504	88050158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_23679.known	chr12	-	1458	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	-88141001	True	NA	NA	False	AGTAAA	-21	NA	88142099	88135852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23681.known	chr12	+	1578	5	FSM	ENSG00000133641.18	ENST00000552121.5	1578	5	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	119.827740945075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTTCAGAAGCAGCAA	88032070	True	NA	NA	False	AGTAAA	-35	NA	88035535	88049225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88046806_88046977_88048233
transcript_23683.known	chr12	+	7192	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	8.32547953378396	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	88138560	True	NA	8	True	AATAAA	-19	NA	88142306	88199887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
transcript_23685.known	chr12	-	5737	9	FSM	ENSG00000049130.16	ENST00000347404.10	5737	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	4.52769256906871	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	88580851	88492792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_23686.nnic	chr12	+	596	4	NNC	ENSG00000281333.2	novel	493	3	NA	NA	-5	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.39934634239519	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	88580395	True	NA	8	True	AATAAA	-21	NA	88580525	88600599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_88580611_88581996_88582139_88597947_88598002_88600284
transcript_23687.nnic	chr12	+	542	3	NNC	ENSG00000281333.2	novel	493	3	NA	NA	-5	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	88580395	True	NA	8	True	AATAAA	-21	NA	88580525	88600599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_88580611_88581996_88582139_88600284
transcript_23688.nnic	chr12	+	624	3	Antisense	novelGene_ENSG00000246363.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTTGGTGTTGCTAC	89087892	True	NA	NA	False	AATAAA	-20	NA	89088112	89165138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_+_89088363_89127328_89127421_89164856
transcript_23690.known	chr12	-	3627	3	FSM	ENSG00000139318.8	ENST00000279488.8	3627	3	0	0	0	0	multi-exon	TRUE	canonical	3	410	junction_2	47.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGAACGTACTTATAT	-89342847	True	NA	NA	False	AATAAA	-23	NA	89352501	89347234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89349562_89350587_89351026_89351639
transcript_23691.known	chr12	-	1959	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAATAAAAA	-89352355	False	NA	-48	True	NA	NA	NA	89352405	89348368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89349562_89351639
transcript_23695.known	chr12	-	1392	12	FSM	ENSG00000139323.14	ENST00000547496.5	1392	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.7588580272199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATTCATTTTCAT	-89524700	True	NA	NA	False	NA	NA	NA	89526000	89421153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89460015_89460039_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_23696.known	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	23.8490431569934	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524747	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_237.known	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_2	1949.6738188733	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
transcript_23702.nic	chr12	-	2780	10	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	32.3377240241444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524756	True	NA	NA	False	AATAAA	-25	NA	89526056	89419717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_23706.nic	chr12	-	2503	8	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	39.4932182243266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524756	True	NA	NA	False	AATAAA	-25	NA	89526056	89419717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89491935_89492116_89525119_89525205_89525880
transcript_23709.nic	chr12	-	1419	6	ISM	ENSG00000070961.16	ENST00000428670.8	7062	21	-38	42467	-38	11307	5prime_fragment	FALSE	canonical	3	55	junction_5	59.454184041159	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAGTAAGAATA	-89708861	False	NA	NA	False	AAGAAA	-15	NA	89708876	89630515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_23710.nic	chr12	-	1293	6	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-73	11307	combination_of_known_junctions	FALSE	canonical	3	158	junction_5	19.2520128817742	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAGTAAGAATA	-89705925	True	NA	NA	False	AAGAAA	-15	NA	89709373	89630515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_23712.nic	chr12	+	353	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	65	52	-9	0	multi-exon	FALSE	canonical	2	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	NA	False	NA	NA	False	AATAAA	-30	NA	92146147	92146918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_92146244_92146661
transcript_23713.known	chr12	+	472	1	FSM	ENSG00000245904.5	ENST00000618125.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	92146256	False	NA	NA	False	AATAAA	-30	NA	92146446	92146918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_92146400_92146900
transcript_23714.known	chr12	+	9753	5	FSM	ENSG00000173598.14	ENST00000337179.9	9753	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	226.48220128743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366893	True	NA	NA	False	AGTAAA	-27	NA	93377882	93408146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_23715.known	chr12	+	9708	5	FSM	ENSG00000173598.14	ENST00000415493.7	9708	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	139.221047259385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366935	True	NA	NA	False	AGTAAA	-27	NA	93377924	93408146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_23717.known	chr12	+	725	7	FSM	ENSG00000198015.14	ENST00000551396.5	725	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1054.04149454479	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAGAAACCTATTT	93451155	True	NA	25	True	TATAAA	-22	NA	93467539	93501385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93467555_93469188_93469356_93470485_93470506_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_23719.known	chr12	+	2105	7	FSM	ENSG00000198015.14	ENST00000358678.7	2105	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1009.02240917743	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGATGGTGTATTCTT	93451133	True	NA	19	True	GATAAA	-19	NA	93467517	93502661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93467555_93469191_93469356_93470485_93470591_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_23728.known	chr12	+	1983	6	FSM	ENSG00000198015.14	ENST00000393128.8	1983	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	931.808263539233	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGCTTTGTCGATGG	93451132	True	NA	10	True	ATTAAA	-37	NA	93467516	93502652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93467555_93469191_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501184
transcript_23735.known	chr12	-	2097	5	FSM	ENSG00000246985.8	ENST00000500986.6	2097	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.29980158417708	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTAAATAAATGTGGCAA	-93571580	True	NA	NA	False	NA	NA	NA	93571768	93542021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93571566
transcript_2374.known	chr1	+	1705	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	246.86927208545	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_23743.known	chr12	+	2761	3	FSM	ENSG00000120833.14	ENST00000340600.6	2761	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	173.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	93569813	93576745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93570199_93572684_93573037_93574721
transcript_23744.known	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	168.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	93570254	True	NA	-15	True	NA	NA	NA	93570398	93576174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93570666_93572684_93573037_93574721
transcript_23745.known	chr12	+	1065	3	FSM	ENSG00000120833.14	ENST00000536696.6	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	135.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTCACATAGAGTAT	93570114	True	NA	NA	False	TATAAA	-31	NA	93570979	93575197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93571217_93572684_93573037_93574721
transcript_23746.known	chr12	+	2391	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	122	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571346	False	NA	17	True	AATAAA	-20	NA	93571360	93576206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93571915_93572684_93573037_93574721
transcript_23749.nic	chr12	+	2091	3	NIC	ENSG00000120833.14	novel	2881	3	NA	NA	-13	0	intron_retention	FALSE	canonical	3	45	junction_1	152.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571996	True	NA	17	True	AATAAA	-20	NA	93572121	93576206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_93572376_93572684_93573037_93574721
transcript_23750.known	chr12	+	2386	2	FSM	ENSG00000120833.14	ENST00000551556.2	2386	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	93572211	True	NA	NA	False	AATAAA	-15	NA	93572674	93576745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93573037_93574721
transcript_23751.known	chr12	+	839	3	FSM	ENSG00000169372.13	ENST00000552983.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTATTCTTTTTTG	93676836	True	NA	NA	False	AATAAA	-24	NA	93677374	93738636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93677473_93678768_93679073_93738199
transcript_23752.known	chr12	+	1189	3	FSM	ENSG00000169372.13	ENST00000332896.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	8	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTTGGGTTTTTTT	93676836	True	NA	39	True	AATAAA	-41	NA	93677374	93850756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93677473_93678768_93679073_93849969
transcript_23758.known	chr12	-	3686	17	FSM	ENSG00000173588.16	ENST00000397809.10	3686	17	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_3	30.2932928839042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAAAAGACAG	-94457484	True	NA	NA	False	AATAAA	-22	NA	94459867	94307697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
transcript_23761.known	chr12	-	3130	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_3	24.8554934683574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGTTTAATTTTACAT	-94457563	True	NA	0	True	ATTAAA	-20	NA	94459946	94308279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_23762.nnic	chr12	-	2976	16	NIC	ENSG00000173588.16	novel	3130	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	19	junction_14	32.6677550839084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGTTTAATTTTACAT	-94457608	True	NA	0	True	ATTAAA	-20	NA	94459991	94308279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412516_94412592_94459556
transcript_23768.nic	chr12	-	3108	8	ISM	ENSG00000173588.16	ENST00000339839.9	3130	16	-45	60118	-3	0	5prime_fragment	FALSE	canonical	3	85	junction_6	20.3389643145307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTGAGTTTTAGCCT	-94457608	True	NA	-5	True	AATAAA	-15	NA	94459991	94368397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_23774.known	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1909.83603681049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-94991560	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
transcript_23775.known	chr12	-	546	5	FSM	ENSG00000184752.14	ENST00000551991.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1889.16099102221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-94991455	True	NA	NA	False	ATTAAA	-15	NA	95003608	94971332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94994169_94994258_94996903_94996977_95002738_95002822_95003594
transcript_23778.known	chr12	-	562	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	2966	junction_1	623.193032338741	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-94991544	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
transcript_23779.known	chr12	-	276	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	1694.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-94991547	True	NA	NA	False	ATTAAA	-16	NA	95003700	94971331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971486_95002805_95002822_95003594
transcript_23780.known	chr12	-	487	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	2031	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGTCTTTCGTGCCT	-94991560	True	NA	NA	False	ATTAAA	-12	NA	95003713	94971335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_95002738_95002822_95003594
transcript_23781.known	chr12	-	708	5	FSM	ENSG00000184752.14	ENST00000684558.1	708	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1912.99882383654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-94991544	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94991826_94991973_94994169_94994258_95002738_95002822_95003594
transcript_23782.nic	chr12	-	2376	14	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	36.5671951797456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069407	True	NA	-3	True	AATAAA	-20	NA	95073615	95021892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95022404_95025149_95025256_95028386_95028510_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23784.known	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	18.0128159503599	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-95069410	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23794.nnic	chr12	-	2233	13	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	43.7799897213327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069387	True	NA	-3	True	AATAAA	-20	NA	95073595	95021892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95022404_95025149_95025256_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_238.known	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	2237	junction_2	1447.67371582826	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
transcript_23800.known	chr12	-	1822	12	FSM	ENSG00000120798.17	ENST00000393101.7	1822	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.3282684049941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069372	True	NA	0	True	AATAAA	-26	NA	95073580	95030408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95030630_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23801.nic	chr12	-	1718	11	NIC	ENSG00000120798.17	novel	1822	12	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.6903871921863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069390	True	NA	0	True	AATAAA	-26	NA	95073598	95030408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95030630_95031348_95031489_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23803.nic	chr12	-	2454	10	NIC	ENSG00000120798.17	novel	1822	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_1	43.0334351778925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069407	True	NA	0	True	AATAAA	-26	NA	95073615	95030408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95031489_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23804.nic	chr12	-	930	5	ISM	ENSG00000120798.17	ENST00000393101.7	1822	12	-38	27761	0	183	5prime_fragment	FALSE	canonical	3	146	junction_4	12.871965661856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTACTTTTTTATTTA	-95069410	True	NA	NA	False	AATATA	-15	NA	95073618	95058169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23805.known	chr12	-	2499	11	FSM	ENSG00000120798.17	ENST00000552861.5	2499	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	48.3517321302971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069361	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95022404_95025149_95025256_95028386_95028510_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23806.known	chr12	-	2014	12	FSM	ENSG00000120798.17	ENST00000330677.7	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	45.5074237881547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTATTCTGCTTCAG	-95069329	True	NA	-9	True	AATAAA	-17	NA	95073537	95030417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95030874_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_23809.known	chr12	+	2712	13	FSM	ENSG00000028203.19	ENST00000552660.5	2712	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.1241042489004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTTGGAAATTCTT	95214234	True	NA	8	True	AATAAA	-26	NA	95217811	95300921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_23810.known	chr12	+	3002	13	FSM	ENSG00000028203.19	ENST00000547997.5	3002	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	88.7716718453709	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214183	True	NA	14	True	AATAAA	-18	NA	95217760	95301172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_23814.known	chr12	+	2362	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.9803142765995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	95214240	True	NA	NA	False	AATAAA	-3	NA	95217817	95300654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_23816.known	chr12	+	4510	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.1009551313308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	95214229	True	NA	103	True	AATAAA	-23	NA	95217806	95302799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_23821.nic	chr12	+	2844	11	NIC	ENSG00000028203.19	novel	3002	13	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	94.0627450162922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214178	True	NA	14	True	AATAAA	-18	NA	95217755	95301172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_23828.nic	chr12	+	285	2	ISM	ENSG00000028203.19	ENST00000549589.5	571	6	44	14830	-9	-10089	5prime_fragment	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACCTGAGACTATTA	95214212	True	NA	NA	False	AATAAA	-10	NA	95217789	95242351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_95217887_95242163
transcript_2383.known	chr1	+	1568	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	66.7006715995929	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288442	True	NA	31	True	ACTAAA	-23	NA	31297031	31364936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_23832.known	chr12	+	1874	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_1	188.79872880928	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	95464216	True	NA	27	True	AATAAA	-1	NA	95474161	95514326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_23835.known	chr12	+	1862	11	FSM	ENSG00000111142.14	ENST00000546753.5	1862	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	248.128515088452	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCCATTTTCTAAA	95474070	False	NA	0	True	NA	NA	NA	95474080	95514299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485947_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_23843.known	chr12	+	2431	10	FSM	ENSG00000111142.14	ENST00000535095.5	2431	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	248.909076562229	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	NA	False	NA	43	True	AATAAA	-17	NA	95473519	95514342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95512800_95512917_95513651
transcript_23857.known	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_5	278.039277800817	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-95542272	True	NA	NA	False	AATAGA	-7	NA	95548844	95517275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
transcript_23858.known	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_5	253.02442569839	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	-95545579	True	NA	-2	True	ATTAAA	-21	NA	95551476	95516559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
transcript_2387.known	chr1	+	1730	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	210.135621901278	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288418	True	NA	31	True	ACTAAA	-23	NA	31297007	31364936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_23877.known	chr12	-	396	2	FSM	ENSG00000258343.2	ENST00000551893.1	396	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCTCACTAGTTTTT	-95858771	True	NA	NA	False	ATTAAA	-22	NA	95858798	95858236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95858588_95858753
transcript_23878.known	chr12	+	1389	4	FSM	ENSG00000139343.11	ENST00000266735.10	452	4	-24	-913	-24	602	multi-exon	FALSE	canonical	3	5074	junction_3	182.93411078552	2726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTCTTACTGCTTTT	95779309	True	NA	NA	False	AATACA	-19	NA	95858927	95867053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95859077_95861167_95861294_95865323_95865389_95866004
transcript_23883.known	chr12	+	552	3	FSM	ENSG00000139343.11	ENST00000553192.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2727.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTATTAAAAAAGGGATGG	95779346	True	NA	NA	False	NA	NA	NA	95858964	95880001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95859077_95861167_95861294_95879687
transcript_23896.known	chr12	-	2140	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	0	0	0	multi-exon	TRUE	canonical	3	1035	junction_13	124.224023540905	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTTCTCTCAGTAT	-96011596	True	NA	-4	True	ATTAAA	-20	NA	96035587	96000752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_2390.known	chr1	+	1458	7	FSM	ENSG00000121766.16	ENST00000616859.4	1458	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	272.598249362602	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31364031
transcript_2391.known	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	229.40460375115	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
transcript_23913.nic	chr12	-	2032	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_2	281.787251953174	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGCATATTCTTTGTAA	NA	False	NA	-7	True	AATAAA	-20	NA	96035639	96000829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_2392.known	chr1	+	1534	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	225.216500776968	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_23930.known	chr12	+	4201	5	FSM	ENSG00000111145.8	ENST00000228741.8	4201	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	6.94172168845741	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGTAACTGGATTGG	96193154	True	NA	17	True	AATAAA	-20	NA	96194374	96269824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96194706_96223564_96223774_96246939_96247735_96259730_96259854_96267081
transcript_23933.known	chr12	+	4015	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	51.4230385030765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	96903455	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_23938.known	chr12	+	3366	15	FSM	ENSG00000139350.12	ENST00000429527.6	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.0998208942831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTTTATAGCAT	96903422	True	NA	19	True	AATAAA	-20	NA	96907223	96953351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96907301_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_23941.known	chr12	+	2490	14	FSM	ENSG00000139350.12	ENST00000411739.6	2490	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	60.2003558148678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATTTTAAAATGGCA	96903436	True	NA	NA	False	TTTAAA	-31	NA	96907237	96952475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96907301_96907603_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_23950.known	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	9.24662100445346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	97462728	True	NA	18	True	AATAAA	-15	NA	97465169	97565035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_23951.known	chr12	+	1736	9	FSM	ENSG00000255794.10	ENST00000663509.1	1736	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	10.9971587239614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCAGAAAATGAGAAAGTA	97462765	True	NA	NA	False	AAGAAA	-16	NA	97465206	97560964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796
transcript_23958.known	chr12	+	687	1	FSM	ENSG00000255794.10	ENST00000547946.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	97564337	False	NA	18	True	AATAAA	-15	NA	97564348	97565035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97564300_97565000
transcript_23960.known	chr12	-	1825	4	FSM	ENSG00000245017.3	ENST00000501499.2	1828	4	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATAGCTCATCTTTTC	-98503780	True	NA	NA	False	AATAAA	-15	NA	98503855	98485543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98487189_98493430_98493485_98502582_98502613_98503759
transcript_23961.known	chr12	-	309	2	FSM	ENSG00000245017.3	ENST00000549004.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAGTTTGGGTTCTGAT	-98491052	True	NA	NA	False	ATTAAA	-23	NA	98491086	98486972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98487189_98490993
transcript_23963.nnic	chr12	+	3521	10	NNC	ENSG00000120802.14	novel	4136	9	NA	NA	0	-39	intron_retention	FALSE	non_canonical	0	0	junction_9	217.110826793855	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTCGTTGCAATAAAT	98483670	True	NA	14	True	AATAAA	-17	NA	98515578	98550312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572_98548839_98549425
transcript_23966.known	chr12	+	4136	9	FSM	ENSG00000120802.14	ENST00000556029.6	4136	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_6	184.817097085199	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTCTGGATAACAT	98483681	True	NA	53	True	AATAAA	-21	NA	98515589	98550351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572
transcript_23969.known	chr12	+	2465	8	FSM	ENSG00000120802.14	ENST00000343315.9	2465	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	235.250279229486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAAAAGGGCCAGGCGC	98483709	True	NA	NA	False	NA	NA	NA	98515617	98548828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544441_98544538_98544950_98545062_98546358_98546448_98547572
transcript_23972.known	chr12	+	3615	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	184.028983224563	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	98483721	True	NA	30	True	AATAAA	-21	NA	98515629	98535634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
transcript_23973.nic	chr12	+	850	3	ISM	ENSG00000120802.14	ENST00000266732.8	3615	4	-51	3800	0	55	5prime_fragment	FALSE	canonical	3	718	junction_1	10	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTAAAATTTTAAATGA	98483670	True	NA	NA	False	AATGAA	-1	NA	98515578	98531834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_98516147_98527885_98528013_98531679
transcript_23977.known	chr12	+	1285	8	FSM	ENSG00000075415.15	ENST00000549338.5	1285	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1034.70060739268	6486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTGTTGAAATAAAC	98549623	True	NA	-18	True	NA	NA	NA	98593695	98601674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98593745_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_23978.known	chr12	+	1417	8	FSM	ENSG00000075415.15	ENST00000551123.5	1417	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1439.62235694374	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	98549623	True	NA	15	True	AATAAA	-15	NA	98593695	98601707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98593741_98593978_98594136_98595432_98595662_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_23979.nnic	chr12	-	1561	4	NNC	ENSG00000166130.15	novel	2902	3	NA	NA	-30	-1320	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_3	56.9619756211691	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATGACCCCAATTTGCC	-98644803	True	NA	NA	False	AATAAA	-18	NA	98644984	98625568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_98626767_98634295_98634414_98644522_98644713_98644929
transcript_23980.known	chr12	-	1645	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	56.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	NA	False	NA	-14	True	AATAAA	-45	NA	98645113	98613404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98614341_98634295_98634414_98644522
transcript_23981.known	chr12	-	2902	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAACTTTGTTGTTTTA	-98642507	True	NA	NA	False	AATAAA	-17	NA	98644788	98624248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98626767_98634295_98634414_98644522
transcript_23985.known	chr12	-	1368	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	-98644940	False	NA	-14	True	AATAAA	-45	NA	98644954	98613404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98614341_98644522
transcript_23991.known	chr12	-	2023	13	FSM	ENSG00000111647.13	ENST00000356828.7	2023	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.2293168753136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTTATTCTA	-100139363	True	NA	NA	False	AATAAA	-21	NA	100142847	100069907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100070170_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_23992.known	chr12	-	5198	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	15.9620644028271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACCCTACTGAACTTA	-100139390	True	NA	-19	True	AATAAA	-26	NA	100142874	100037071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_23997.known	chr12	+	1737	11	FSM	ENSG00000075089.10	ENST00000188312.7	1737	11	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	26.7477101823689	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	100198240	True	NA	9	True	AATAAA	-17	NA	100200814	100224424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_23998.known	chr12	+	1659	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	93.2448389992712	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	100198255	True	NA	6	True	AATAAA	-14	NA	100200829	100224421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_24.known	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00060_+_0_500
transcript_24001.known	chr12	+	1747	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	98.1396963516802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	100198242	True	NA	8	True	AATAAA	-16	NA	100200816	100224423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_24003.known	chr12	+	1877	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	95.7843411002028	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	100198241	True	NA	9	True	AATAAA	-17	NA	100200815	100224424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_24004.known	chr12	+	1715	11	FSM	ENSG00000075089.10	ENST00000551617.1	1715	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	123.104021055366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTGTACCTAGAGTA	100198276	True	NA	-58	True	NA	NA	NA	100200850	100224357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_24012.known	chr12	-	3324	10	FSM	ENSG00000166153.17	ENST00000550587.6	3324	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.54521404218424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCAGTTTTATCTTTT	-100266479	True	NA	NA	False	AATAAA	-15	NA	100267079	100240061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100241846_100242485_100242570_100248899_100248979_100252175_100252302_100252393_100252537_100253488_100253716_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_24035.known	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.80752262296652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	-100266479	True	NA	NA	False	AATAAA	-28	NA	100267079	100252262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_24040.known	chr12	-	1033	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.98887651569859	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTGGAAATCAGAGTG	-100266455	True	NA	NA	False	AATAAA	-22	NA	100267055	100255872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
transcript_24045.known	chr12	+	3948	19	FSM	ENSG00000136021.19	ENST00000635101.1	3948	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	34.5092580170726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGTTGTATCTTCTG	100265135	True	NA	7	True	AATAAA	-18	NA	100267245	100340139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317680_100317693_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_24047.known	chr12	+	2218	9	FSM	ENSG00000139354.11	ENST00000266754.9	2218	9	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_3	7.33037345569787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATACTCATTATAAAAA	100572567	True	NA	NA	False	AAGAAA	-13	NA	100573682	100624890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100573786_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_24048.known	chr12	+	5736	10	FSM	ENSG00000139354.11	ENST00000547754.6	5736	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.3388376105793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCAGTTTGCTTT	100572568	True	NA	11	True	ATTAAA	-16	NA	100573683	100628288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100573786_100591735_100591857_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_24050.known	chr12	+	9031	62	FSM	ENSG00000120800.5	ENST00000261637.5	9031	62	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_10	30.3649042808639	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTCTTCACTGTTTAA	101275841	True	NA	17	True	AATAAA	-18	NA	101280104	101386618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732_101290889_101291741_101291889_101291969_101292105_101293167_101293246_101295479_101295659_101299681_101299838_101299972_101300062_101302447_101302554_101305914_101306066_101306698_101306762_101308184_101308344_101309762_101309840_101311718_101311799_101312035_101312277_101317477_101317664_101319544_101319636_101320851_101320938_101321503_101321630_101327080_101327248_101329240_101329450_101333300_101333445_101334424_101334505_101338050_101338278_101338812_101338958_101340522_101340611_101342445_101342590_101342786_101342838_101342940_101343094_101344594_101344751_101345553_101345695_101346450_101346589_101352054_101352195_101353046_101353130_101354831_101355119_101356553_101356694_101356925_101357083_101361961_101362061_101363575_101363744_101365458_101365626_101366557_101366700_101367859_101367977_101369720_101369892_101370431_101370564_101371057_101371169_101372883_101372964_101373400_101373471_101373584_101373768_101374807_101374940_101375623_101375757_101379370_101379559_101381139_101381212_101383040_101383314_101383542_101383670_101385582_101385729_101385967
transcript_24053.known	chr12	-	3197	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_5	32.5392071200268	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTCCTTTCTGATC	-101397810	True	NA	-15	True	AATAAA	-42	NA	101407772	101393115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_24058.known	chr12	-	1231	5	FSM	ENSG00000120805.14	ENST00000539055.5	1231	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	237.49157879807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCTGCTAGCTTGTAA	-101397784	True	NA	NA	False	NA	NA	NA	101407746	101394917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101407641
transcript_24060.known	chr12	-	879	5	FSM	ENSG00000120805.14	ENST00000551671.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	35.1167694983465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTCCTTATCCTTCAGG	-101397791	True	NA	NA	False	NA	NA	NA	101407753	101396142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_24067.known	chr12	+	1572	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_8	16.6508258053467	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	101696163	True	NA	10	True	AATAAA	-22	NA	101697639	101729074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
transcript_24068.known	chr12	+	3279	7	FSM	ENSG00000136048.14	ENST00000258534.13	3279	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	6.86577664134866	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGGTAATGTTGACTG	101877001	True	NA	4	True	AATAAA	-14	NA	101877579	101923612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_101877921_101897862_101897931_101901290_101901434_101908185_101908364_101914173_101914233_101920108_101920202_101921215
transcript_24072.known	chr12	-	945	8	FSM	ENSG00000120860.11	ENST00000544341.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	59.9183117388387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	-102060723	True	NA	0	True	AATAAA	-18	NA	102062073	102012941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102017719_102017806_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_24073.known	chr12	-	921	8	FSM	ENSG00000120860.11	ENST00000535501.5	921	8	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	60.7094115690576	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGTCTTGTTGCTAAA	-102060684	True	NA	-2	True	AATAAA	-16	NA	102062034	102012943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102050188_102050292_102061247_102061347_102061911
transcript_24074.known	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	41.0365690573664	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	-102060729	True	NA	0	True	AATAAA	-18	NA	102062079	102012941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_24077.known	chr12	-	2362	10	FSM	ENSG00000075188.9	ENST00000552283.6	2362	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_9	44.1540513080462	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTATGTGTCTGTCACG	-102117251	True	NA	NA	False	AATAAA	-15	NA	102120114	102073102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_24078.known	chr12	-	1203	9	FSM	ENSG00000075188.9	ENST00000251074.5	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_6	33.7999630177312	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTTTCTACTCT	-102115720	False	NA	-15	True	AATAAA	-15	NA	102118583	102074196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362
transcript_2408.known	chr1	-	693	5	FSM	ENSG00000121769.8	ENST00000498148.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	143.479092553584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTAACT	-31368136	True	NA	-10	True	NA	NA	NA	31373073	31365720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31365940_31367392_31367495_31369069_31369137_31369384_31369558_31372941
transcript_24081.known	chr12	+	1916	11	FSM	ENSG00000185480.12	ENST00000392911.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	72.7646205239882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTTTAAAAATACTAGT	102117175	True	NA	NA	False	NA	NA	NA	102120246	102196429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_102120287_102123885_102124042_102148234_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_24082.nic	chr12	+	2948	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	100	junction_9	60.7581727470104	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	102117099	True	NA	5	True	AATAAA	-19	NA	102120170	102197516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
transcript_24085.nic	chr12	+	2725	9	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	41	junction_6	85.6277371825275	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	102117099	True	NA	9	True	AATAAA	-23	NA	102120170	102197520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195311_102195448_102195950
transcript_24088.nic	chr12	+	2585	8	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	41	junction_6	84.4627680322725	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	102117099	True	NA	5	True	AATAAA	-19	NA	102120170	102197516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
transcript_24095.nic	chr12	+	2510	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	51	junction_6	78.6949101841338	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	102117099	True	NA	9	True	AATAAA	-23	NA	102120170	102197520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
transcript_2410.known	chr1	-	1097	4	FSM	ENSG00000121769.8	ENST00000373713.7	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	17.1464281994822	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAATGACCACTG	-31368139	True	NA	NA	False	NA	NA	NA	31373076	31365252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31365940_31367392_31367495_31369384_31369558_31372941
transcript_24100.nnic	chr12	+	2339	6	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	24	junction_4	112.297105928871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	102117099	True	NA	9	True	AATAAA	-23	NA	102120170	102197520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102165728_102165884_102195950
transcript_24108.nic	chr12	+	1052	5	ISM	ENSG00000185480.12	ENST00000327680.7	3076	11	-12	32645	-12	9595	5prime_fragment	FALSE	canonical	3	200	junction_3	42.8631543402956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTCTGTTAAATGTTCTT	102117099	True	NA	NA	False	AATAAA	-18	NA	102120170	102164875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437
transcript_24111.known	chr12	+	992	5	FSM	ENSG00000185480.12	ENST00000543784.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	121.688896371033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAATTATGATGATTT	102117123	True	NA	NA	False	TATAAA	-39	NA	102120194	102196368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_102120287_102123885_102124042_102164437_102164609_102165728_102165884_102195950
transcript_24112.nic	chr12	+	1886	4	ISM	ENSG00000185480.12	ENST00000541394.5	2452	12	-14	43718	-12	937	5prime_fragment	FALSE	canonical	2	12	junction_3	129.184622407881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAGGAGTTAAACAG	102117099	True	NA	NA	False	AGTAAA	-19	NA	102120170	102152949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102151569
transcript_24115.known	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	102117173	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_102120287_102123885_102124042_102148229
transcript_24119.known	chr12	-	652	4	FSM	ENSG00000171759.10	ENST00000550978.6	652	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTCTATATACTAG	-102916797	False	NA	NA	False	TATAAA	-15	NA	102917114	102877234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102877551_102894734_102894919_102912790_102912899_102917070
transcript_2412.known	chr1	+	1900	10	FSM	ENSG00000168528.12	ENST00000373709.8	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	22.5492602052145	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGCCCCTCACCCT	31409890	True	NA	29	True	AATAAA	-20	NA	31413212	31434678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_24122.known	chr12	+	2646	18	FSM	ENSG00000166598.16	ENST00000680316.1	2646	18	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_1	1347.6492489776	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103736183	False	NA	8	True	AATAAA	-11	NA	103930599	103947922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24126.known	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.7492689995981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	-103955039	True	NA	64	True	NA	NA	NA	103957134	103951409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
transcript_24130.known	chr12	-	1243	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	17.326921891156	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-103955086	True	NA	0	True	ATTAAA	-25	NA	103957181	103950739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
transcript_24138.known	chr12	-	685	3	FSM	ENSG00000204954.10	ENST00000552940.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGGACTGAAAGAAAGAA	-103955052	True	NA	-110	True	NA	NA	NA	103957147	103951583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103953413_103953535_103956630
transcript_24139.known	chr12	-	1702	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	7.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-103955120	True	NA	NA	False	ATTAAA	-31	NA	103957215	103950193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630_103956749_103957068
transcript_24140.known	chr12	-	463	3	FSM	ENSG00000204954.10	ENST00000547945.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	53.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGTGCTCAGTGGAT	-103957242	False	NA	54	True	NA	NA	NA	103957273	103951419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630_103956749_103957139
transcript_24141.known	chr12	-	660	3	FSM	ENSG00000204954.10	ENST00000553183.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	52.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACGCGAAATAGAATATTT	-103965390	True	NA	-32	True	NA	NA	NA	103965708	103951281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630_103956749_103965515
transcript_24150.known	chr12	-	1446	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCATCTTTATTTC	-103955095	True	NA	-5	True	ATTAAA	-20	NA	103957190	103950744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630
transcript_24155.known	chr12	+	2775	18	FSM	ENSG00000166598.16	ENST00000679538.1	2775	18	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	1333.4480190008	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735994	True	NA	8	True	AATAAA	-11	NA	103930410	103947922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932278_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24156.known	chr12	+	2570	18	FSM	ENSG00000166598.16	ENST00000681698.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1362.97453816845	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735996	True	NA	8	True	AATAAA	-11	NA	103930412	103947922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103934160_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24157.known	chr12	+	3248	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	688.245221105821	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735941	True	NA	8	True	AATAAA	-11	NA	103930357	103947922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24158.known	chr12	+	2816	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1704.0851750868	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735993	True	NA	8	True	AATAAA	-11	NA	103930409	103947922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24159.known	chr12	+	1602	11	FSM	ENSG00000139372.15	ENST00000266775.13	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	117.640809245772	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGGTGTAATTGTAATG	103957473	True	NA	NA	False	NA	NA	NA	103965844	103987192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_24165.known	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_6	41.2579958580421	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	103957500	True	NA	11	True	AATAAA	-26	NA	103965871	103988874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_2417.known	chr1	-	1614	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_4	36.0234298755685	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTTTTCCACCATG	-31640074	True	NA	-4	True	AATAAA	-17	NA	31644876	31629865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
transcript_24171.known	chr12	+	1387	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	123.142638330515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGTAATTGTAATGTA	103957473	True	NA	NA	False	NA	NA	NA	103965844	103987194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_24175.nic	chr12	+	599	4	ISM	ENSG00000139372.15	ENST00000266775.13	1602	11	-50	7246	-27	-527	5prime_fragment	FALSE	canonical	3	63	junction_1	151.447093805798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAAAAATTACAGACAC	NA	False	NA	NA	False	AAGAAA	-3	NA	103965794	103979946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830
transcript_24176.known	chr12	+	1139	3	FSM	ENSG00000139372.15	ENST00000544060.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	53.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATAACAGCAAA	103957531	True	NA	NA	False	CATAAA	-14	NA	103965902	103980668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103976917_103977061_103979830
transcript_24177.nic	chr12	+	391	2	ISM	ENSG00000139372.15	ENST00000544060.1	1139	3	-90	3608	-9	-3413	5prime_fragment	FALSE	canonical	3	297	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCACCATGAGAGCT	103957441	True	NA	NA	False	NA	NA	NA	103965812	103977060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_103966061_103976917
transcript_24179.known	chr12	-	1927	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	11.1575086824972	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-104050176	False	NA	-16	True	AATAAA	-17	NA	104050187	103988986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_2418.known	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	112.221012094686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	-31640094	True	NA	NA	False	NA	NA	NA	31644896	31630448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
transcript_24181.nic	chr12	-	1771	10	ISM	ENSG00000120820.13	ENST00000548660.5	1835	11	14017	-293	21	0	3prime_fragment	FALSE	canonical	3	22	junction_9	19.5049851177704	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-104049493	True	NA	-16	True	AATAAA	-17	NA	104050166	103988986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
transcript_24183.known	chr12	-	1835	11	FSM	ENSG00000120820.13	ENST00000548660.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.6904315603784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAAATTATACCT	-104064145	False	NA	-28	True	TATAAA	-12	NA	104064183	103989279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894_104050289_104063948
transcript_24194.known	chr12	+	5660	15	FSM	ENSG00000111727.12	ENST00000229330.9	5660	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	3.41141541035987	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGTTATTTATTTT	104064269	True	NA	NA	False	AATAAA	-23	NA	104064530	104106524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104064724_104066166_104066316_104067946_104068108_104079444_104079654_104080745_104080831_104082499_104082607_104082712_104082902_104086846_104087015_104087985_104088039_104093385_104093564_104095359_104095564_104096359_104096434_104098342_104098481_104101967_104102154_104102958
transcript_24195.known	chr12	-	3508	9	FSM	ENSG00000120837.8	ENST00000551446.6	3508	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	231.478096965998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAACCTATCATAAAAA	-104133610	True	NA	-38	True	NA	NA	NA	104138241	104117117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104131753_104131839_104135447_104135533_104138140
transcript_2420.nic	chr1	-	1467	7	NIC	ENSG00000184007.22	novel	3910	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	89	junction_6	591.577951095392	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAGAAAAGGAATTAA	-31925244	True	NA	-18	True	AATAAA	-15	NA	31938360	31908652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938060_31938262
transcript_24200.known	chr12	-	3424	8	FSM	ENSG00000120837.8	ENST00000240055.8	3424	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	68.0009003541835	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAACATTGCTTTCT	-104133579	True	NA	-6	True	CATAAA	-15	NA	104138210	104117085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104138140
transcript_24209.known	chr12	+	3930	15	FSM	ENSG00000198431.17	ENST00000503506.6	3930	15	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	75.2896786703577	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATATCCACGTGTGCCT	NA	False	NA	4	True	ATTAAA	-14	NA	104286681	104350277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104287110_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_24211.nic	chr12	+	3536	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	107.119741659763	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	104282429	True	NA	10	True	ATTAAA	-20	NA	104286971	104350283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_24216.known	chr12	+	3858	15	FSM	ENSG00000198431.17	ENST00000527688.5	3858	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	163.301977067902	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	104288703	False	NA	10	True	ATTAAA	-20	NA	104288717	104350283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104346018_104346156_104348352
transcript_24217.known	chr12	+	528	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1529	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCAGGGCCCTCGTCC	104265212	False	NA	NA	False	NA	NA	NA	104265308	104265836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104265300_104265800
transcript_24218.known	chr12	+	1467	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGATATTTGATAATT	104303563	True	NA	11	True	AATAAA	-21	NA	104303738	104305205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104303700_104305200
transcript_24221.known	chr12	+	2897	25	FSM	ENSG00000136051.15	ENST00000311317.8	2897	25	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_24	49.7234015999174	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	105101439	True	NA	NA	False	NA	NA	NA	105107713	105147905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105147609
transcript_24225.known	chr12	+	23524	4	FSM	ENSG00000151131.11	ENST00000552951.7	23524	4	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_3	55.659680200303	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTCCTTCTCTTTA	104974643	True	NA	5	True	AATAAA	-16	NA	104986315	105017625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104986468_104988166_104988254_104991711_104991849_104994477
transcript_24226.known	chr12	+	459	3	FSM	ENSG00000151131.11	ENST00000280749.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	594.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGACATATGTCTGCAA	104974666	True	NA	16	True	AATAAA	-16	NA	104986338	104994720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104986468_104988166_104988254_104994477
transcript_24227.known	chr12	+	2277	10	FSM	ENSG00000166046.11	ENST00000299045.8	2277	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.21051007144365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTTGAAATGTACAAT	106302216	True	NA	NA	False	AATAAA	-20	NA	106302732	106347003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106335638_106335827_106336031_106336214_106340825_106340999_106346285
transcript_24228.known	chr12	+	1788	7	FSM	ENSG00000166046.11	ENST00000547153.5	1788	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.57347424467075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCAGTAGAGAATTAC	106302286	True	NA	NA	False	AATAAA	-23	NA	106302802	106330171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106329329
transcript_24229.known	chr12	+	4183	28	FSM	ENSG00000013503.10	ENST00000228347.9	4183	28	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_15	9.92938027233284	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGCTGCTTTGTCAT	106356040	True	NA	8	True	NA	NA	NA	106357747	106510198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106357952_106363869_106363903_106366515_106366573_106366657_106366723_106369274_106369351_106369582_106369684_106376358_106376451_106378266_106378385_106380030_106380140_106393030_106393154_106405856_106405977_106410825_106410961_106427196_106427359_106430272_106430474_106432317_106432481_106433718_106433873_106437056_106437132_106437680_106437780_106444462_106444591_106454501_106454712_106457137_106457297_106459250_106459369_106463477_106463621_106496054_106496159_106496751_106496919_106501322_106501437_106504080_106504255_106509419
transcript_2423.known	chr1	+	2713	9	FSM	ENSG00000121774.18	ENST00000327300.12	2713	9	0	0	0	0	multi-exon	FALSE	canonical	3	1557	junction_1	186.944510483726	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	32001078	True	NA	NA	False	AATAAA	-23	NA	32013867	32043877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_24232.nnic	chr12	-	790	3	NIC	ENSG00000257711.2	novel	627	3	NA	NA	-90193	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGTCCTGATGACCCT	-106774843	True	NA	NA	False	AATAAA	-19	NA	106774900	106680757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_106681158_106681990_106682170_106774689
transcript_24233.known	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	51.7987558838155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	106771665	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
transcript_24234.known	chr12	+	2134	9	FSM	ENSG00000111785.21	ENST00000470628.2	2134	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	40.2692112537606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCTTCCCCTCTTGCT	106771729	False	NA	NA	False	NA	NA	NA	106774745	106871505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822
transcript_24235.known	chr12	+	2440	9	FSM	ENSG00000111785.21	ENST00000392839.6	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	29.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAACACACACATCCTC	106771623	True	NA	NA	False	NA	NA	NA	106774639	106886786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_24239.nic	chr12	+	1166	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-166	55942	-41	597	5prime_fragment	FALSE	canonical	3	169	junction_2	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTCTCTTTTTAAGAG	106771563	True	NA	NA	False	AATATA	-16	NA	106774579	106815563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_106774830_106783996_106784045_106814695
transcript_2424.known	chr1	+	1778	9	FSM	ENSG00000121775.18	ENST00000336294.10	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	42.1453956559907	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	32069447	True	NA	80	True	AAAAAG	-21	NA	32072938	32102863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_24240.known	chr12	-	1469	1	FSM	ENSG00000260329.1	ENST00000570282.1	1469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGAATCTGTTTCATA	-106955433	True	NA	NA	False	ATTAAA	-18	NA	106955497	106954028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106954000_106955500
transcript_24243.known	chr12	-	1763	3	FSM	ENSG00000120832.10	ENST00000392830.6	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	25.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAAGTGAATCACTT	-106986207	True	NA	NA	False	ATTAAA	-18	NA	106987149	106977290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978772_106985114_106985216_106986968
transcript_24244.known	chr12	-	418	3	FSM	ENSG00000120832.10	ENST00000550496.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	25.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATACAACTGATAAACAG	-106986180	True	NA	NA	False	AATACA	-22	NA	106987122	106978614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978768_106985114_106985226_106986968
transcript_24246.known	chr12	-	715	2	FSM	ENSG00000120832.10	ENST00000548101.1	715	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGTTGAGAAGAATAAGC	-106986148	True	NA	NA	False	NA	NA	NA	106987090	106978178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978772_106986968
transcript_24247.known	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	-106986184	True	NA	-1	True	ATTAAA	-22	NA	106987126	106977548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978772_106985114
transcript_24249.known	chr12	-	2987	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_11	22.0031563392366	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTACGTGTTTTTTT	-107089862	True	NA	0	True	ATTAAA	-19	NA	107093549	106991363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_24258.known	chr12	+	2549	15	FSM	ENSG00000136045.12	ENST00000412830.8	2549	15	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_11	59.6970668954377	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATTCTGTTTCTTTGTT	107677430	True	NA	9	True	ATTAAA	-15	NA	107685798	107713162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466_107697598_107699372_107699435_107702934_107703032_107703684_107703747_107704635_107704748_107708925_107709017_107709110_107709233_107710404_107710511_107712110
transcript_24272.nic	chr12	+	881	7	ISM	ENSG00000136045.12	ENST00000412830.8	2549	15	-55	15584	-55	0	5prime_fragment	FALSE	canonical	3	730	junction_5	65.3018631689275	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGGAAAGAAGG	107677375	True	NA	NA	False	AGTAAA	-15	NA	107685743	107697578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466
transcript_24274.known	chr12	-	4154	19	FSM	ENSG00000075856.12	ENST00000546815.6	4154	19	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_10	30.3415231109343	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTCCAGCATTCCTC	-108560544	True	NA	-3	True	AATAAA	-18	NA	108561173	108522213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24277.known	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	70.6739383051175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	-108560530	True	NA	-35	True	NA	NA	NA	108561159	108522703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24280.nic	chr12	-	1867	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-14	8009	-14	0	5prime_fragment	FALSE	canonical	3	279	junction_6	25.2393642987315	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAGATCAGA	-108560558	True	NA	NA	False	AAGAAA	-8	NA	108561187	108530222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24284.known	chr12	+	3255	3	FSM	ENSG00000198855.7	ENST00000552695.6	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGACTGTCTTATTT	108514723	True	NA	NA	False	AATAAA	-19	NA	108515276	108521210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108515362_108516914_108517274_108518399
transcript_24287.known	chr12	-	3637	19	FSM	ENSG00000075856.12	ENST00000546728.5	3637	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	80.1782735880211	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGACGTTCTCTTCA	-108560532	True	NA	-39	True	NA	NA	NA	108561161	108522707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538944_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24288.known	chr12	+	1069	6	FSM	ENSG00000136003.16	ENST00000392807.8	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	630.740200082411	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552078	True	NA	14	True	AATAAA	-15	NA	108562605	108569368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_24291.known	chr12	+	1330	5	FSM	ENSG00000136003.16	ENST00000535729.5	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	611.512213696505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCAGTTCTATAGAAGA	108552073	True	NA	NA	False	AAGAAA	-9	NA	108562600	108568547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657
transcript_24292.known	chr12	+	983	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	75.5360013503495	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552068	True	NA	14	True	AATAAA	-15	NA	108562595	108569368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_24295.known	chr12	+	1169	7	FSM	ENSG00000136003.16	ENST00000539580.5	1169	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	637.830546113586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552078	True	NA	14	True	AATAAA	-15	NA	108562605	108569368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108567657_108567758_108568830
transcript_24297.known	chr12	-	3814	11	FSM	ENSG00000110880.11	ENST00000261401.8	3814	11	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	55.1243140546892	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGTGTTTATTTCA	-108726943	True	NA	NA	False	GATAAA	-18	NA	108731518	108645108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_243.known	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3729	junction_1	1870.01983612474	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
transcript_2430.known	chr1	+	1538	7	FSM	ENSG00000121775.18	ENST00000441402.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	29.3806436658937	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	32069451	True	NA	83	True	AAAAAG	-24	NA	32072942	32102866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_24302.nic	chr12	-	1345	8	ISM	ENSG00000110880.11	ENST00000261401.8	3814	11	-22	6936	-14	0	5prime_fragment	FALSE	canonical	3	482	junction_7	54.9771752268009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCACTTTTTTTTTTTT	-108726965	True	NA	NA	False	AAAAAG	-11	NA	108731540	108652044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_24303.known	chr12	-	1030	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	29.2232783924049	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091823	True	NA	-3	True	AATAAA	-17	NA	109093472	109088188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
transcript_24304.nic	chr12	-	946	4	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	47.5184174820669	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091842	True	NA	-3	True	AATAAA	-17	NA	109093491	109088188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109090008_109090208_109092506_109092788_109093349
transcript_24305.known	chr12	-	1180	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	26.8865931067677	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091823	True	NA	-3	True	AATAAA	-17	NA	109093472	109088188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
transcript_24306.nic	chr12	-	1079	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	48.4584587272668	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091825	True	NA	-3	True	AATAAA	-17	NA	109093474	109088188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
transcript_24307.nic	chr12	-	859	3	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	2	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109093471	False	132	-2	True	AATAAA	-18	NA	109093499	109088187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109092506_109092788_109093246
transcript_24309.nic	chr12	-	1022	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109093484	False	NA	-2	True	AATAAA	-18	NA	109093512	109088187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109092506_109092938_109093246
transcript_24310.known	chr12	-	895	3	FSM	ENSG00000189046.11	ENST00000619381.4	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	22.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109091839	True	NA	-2	True	AATAAA	-18	NA	109093488	109088187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109088513_109092506_109092938_109093349
transcript_24311.known	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	96.6639367430619	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109089479	True	NA	23	True	AATAAA	-16	NA	109097596	109110992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_24315.known	chr12	+	2130	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_5	46.189176221275	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	109090000	False	NA	6	True	NA	NA	NA	109098117	109110975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_24316.known	chr12	+	2016	5	FSM	ENSG00000076248.11	ENST00000446767.2	2016	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	397.830051655226	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109095645	True	NA	23	True	AATAAA	-16	NA	109098150	109110992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109098639_109099188_109099285_109102838_109102928_109103432_109103612_109109828
transcript_24318.known	chr12	+	678	5	FSM	ENSG00000076555.16	ENST00000544726.2	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	4.54835134966506	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTTCCGGAGCTGCTG	109153525	True	NA	NA	False	NA	NA	NA	109154681	109172311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109154941_109166860_109166994_109167895_109168035_109171804_109171915_109172274
transcript_2432.nic	chr1	+	1556	7	NIC	ENSG00000121775.18	novel	1778	9	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	46.0377260757112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	NA	False	NA	80	True	AAAAAG	-21	NA	32072857	32102863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32073052_32074950_32075078_32075666_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_24320.known	chr12	-	3920	7	FSM	ENSG00000110906.13	ENST00000228495.11	3920	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	31.196954979613	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	-109471716	True	NA	NA	False	AATAAA	-15	NA	109477300	109448654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109460635_109460806_109469514_109469729_109477259
transcript_24321.known	chr12	-	708	2	FSM	ENSG00000110906.13	ENST00000538377.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCATGTGTGTATATGT	-109471716	True	NA	NA	False	NA	NA	NA	109477300	109469061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109469729_109477259
transcript_24324.known	chr12	+	1448	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	53.2762552644234	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475781	True	NA	11	True	ATTAAA	-17	NA	109477651	109490722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24326.known	chr12	+	1120	9	FSM	ENSG00000151148.14	ENST00000536398.5	1120	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	52.0576603392815	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475764	True	NA	11	True	ATTAAA	-17	NA	109477634	109490722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24328.known	chr12	+	1541	9	FSM	ENSG00000151148.14	ENST00000540230.5	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	73.6206492772238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGCATGTTCTTGAA	109475782	True	NA	NA	False	AAGAAA	-11	NA	109477652	109491149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109477777_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24331.nic	chr12	+	1015	8	NIC	ENSG00000151148.14	novel	1120	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	74.0322599290612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475763	True	NA	11	True	ATTAAA	-17	NA	109477633	109490722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_109477765_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24334.nic	chr12	+	1527	7	ISM	ENSG00000151148.14	ENST00000340074.9	1448	9	-23	1679	1	-1679	5prime_fragment	FALSE	canonical	3	82	junction_1	50.7137938719722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTGGTAAGTGTC	109475758	True	NA	NA	False	TATAAA	-5	NA	109477628	109489043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571
transcript_24336.known	chr12	+	2833	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	23.1622537763491	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTAGGCGTGTTTA	109571717	True	NA	NA	False	CATAAA	-31	NA	109573793	109598125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24338.known	chr12	+	1770	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	44.2537576000998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	109571760	True	NA	8	True	AATAAA	-16	NA	109573836	109597261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24340.known	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	83.383984606691	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	-109570687	True	NA	-8	True	AATAAA	-11	NA	109573503	109556702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_24341.known	chr12	+	1644	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	48.9029651452752	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	109571716	True	NA	-17	True	NA	NA	NA	109573792	109597236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24342.known	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	22.0850628253578	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	-109570688	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_2435.nic	chr1	+	2229	14	NIC	ENSG00000025800.14	novel	7355	14	NA	NA	-16	-1734	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	55.1018422355503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTATTTAATTTTTTT	32099186	True	NA	28	True	AAAACA	-44	NA	32108039	32171439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32108135_32154587_32154722_32156852_32156928_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_24351.known	chr12	-	945	7	FSM	ENSG00000139428.12	ENST00000540016.5	945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.3313052824359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	-109570681	True	NA	-2	True	AATAAA	-17	NA	109573497	109556696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109573346
transcript_24353.known	chr12	-	650	4	FSM	ENSG00000139428.12	ENST00000536760.1	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	23.4568161143456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTTAGCTACTCAGGA	-109570667	True	NA	NA	False	NA	NA	NA	109573483	109564819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109565177_109568769_109568864_109571648_109571711_109573346
transcript_24354.known	chr12	-	1342	3	FSM	ENSG00000139428.12	ENST00000537236.2	1342	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	22	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTTAAAAAAT	-109570764	True	NA	NA	False	NA	NA	NA	109573580	109567817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109568864_109571648_109571711_109573346
transcript_24355.known	chr12	+	1591	8	FSM	ENSG00000110921.14	ENST00000629016.2	1591	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	51.2942690835568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGACTCCAGGCCACC	109572730	False	NA	9	True	AATAAA	-17	NA	109574806	109597262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24356.known	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	11.5542200082913	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-109877130	True	NA	-1	True	AATAAA	-22	NA	109880541	109850944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_24357.known	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	30.2415446101578	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	-109994214	True	NA	NA	False	NA	NA	NA	109996296	109947321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_2436.known	chr1	+	7355	14	FSM	ENSG00000025800.14	ENST00000373625.8	7355	14	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	22.9029338447768	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGCT	32099202	True	NA	15	True	AATAAA	-17	NA	32108055	32176563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32108135_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_24360.known	chr12	+	3096	13	FSM	ENSG00000139437.18	ENST00000405876.9	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	11.6904519445001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTGGCTTTGTTAC	109899356	True	NA	17	True	AATAAA	-18	NA	109900273	109918069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571_109906641_109907525_109907700_109908585_109908699_109908870_109908938_109911062_109911236_109912990_109913073_109914441_109914628_109915402_109915547_109916590
transcript_24364.nic	chr12	+	678	5	ISM	ENSG00000139437.18	ENST00000405876.9	3096	13	-3	11432	-3	0	5prime_fragment	FALSE	canonical	3	48	junction_1	8.21583836257749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	109899353	True	NA	NA	False	AAGAAA	-6	NA	109900270	109906637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_24365.known	chr12	+	973	5	FSM	ENSG00000139437.18	ENST00000536408.2	973	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.206387117734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	109900592	False	NA	NA	False	AAGAAA	-6	NA	109900608	109906637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109901060_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_24366.known	chr12	-	1709	1	FSM	ENSG00000280426.1	ENST00000624844.1	1709	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTGTTATTTTTGT	-109999115	True	NA	NA	False	ATTAAA	-29	NA	109999127	109997418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109997400_109999100
transcript_24369.known	chr12	-	496	3	FSM	ENSG00000174456.16	ENST00000551185.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGACCTTTGGTCTG	-110046288	True	NA	NA	False	NA	NA	NA	110048565	110042280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110042460_110044419_110044534_110048362
transcript_24370.known	chr12	-	1755	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGCTGAATTCAACA	-110046278	True	NA	6	True	GATAAA	-24	NA	110048555	110027027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110028590_110048362
transcript_24376.known	chr12	-	724	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	1	718	1	87	multi-exon	FALSE	canonical	3	79	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTGCAAAGTGGTGT	-110046244	True	NA	NA	False	NA	NA	NA	110048521	110041894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110042460_110048362
transcript_24377.known	chr12	-	461	2	FSM	ENSG00000174456.16	ENST00000546627.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGAAGTTGGAACCAAA	-110046245	True	NA	NA	False	NA	NA	NA	110048522	110042311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110042613_110048362
transcript_2438.known	chr1	+	4865	11	FSM	ENSG00000084652.16	ENST00000373610.8	4865	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	28.9117623122493	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32168226	True	NA	9	True	AATAAA	-16	NA	32179674	32198285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_24382.known	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_1	18.0797274097227	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	110122807	True	NA	2	True	AATAAA	-16	NA	110124334	110218775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_24383.known	chr12	+	3124	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_1	19.1740726432439	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	110122829	True	NA	20	True	AATAAA	-34	NA	110124356	110218793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_24389.known	chr12	+	3048	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	34.7624762073434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAATGAGCCTCCCTG	110122807	True	NA	NA	False	AGTAAA	-16	NA	110124334	110169182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
transcript_2439.known	chr1	+	880	6	FSM	ENSG00000160050.16	ENST00000373602.10	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	15.2	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197182	True	NA	NA	False	ATTAAA	-16	NA	32200594	32205387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597_32204621_32205193
transcript_24390.known	chr12	+	4453	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_20	115.813762135594	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	110281076	False	NA	NA	False	AATAAA	-14	NA	110281115	110351090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
transcript_24399.known	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_10	34.9972856090297	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-110399157	True	NA	-6	True	AAAAAG	-3	NA	110403708	110372899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_2441.known	chr1	+	1415	5	FSM	ENSG00000160050.16	ENST00000421922.6	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	12.49749974995	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197220	True	NA	NA	False	ATTAAA	-16	NA	32200632	32205387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597
transcript_24411.known	chr12	-	2200	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_9	27.5886897562957	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACAGAAGTGGTTTCTT	-110399179	True	NA	-24	True	AATAAA	-20	NA	110403730	110375476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_2442.known	chr1	+	633	5	FSM	ENSG00000160050.16	ENST00000681230.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	171.42345230452	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197235	True	NA	NA	False	ATTAAA	-16	NA	32200647	32205387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204597_32204621_32205193
transcript_24422.known	chr12	-	946	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_3	108.877096867166	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGTGTACAATTCA	-110423356	True	NA	57	True	GATAAA	-20	NA	110450337	110434822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
transcript_2443.known	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.18465843842649	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	32204898	True	NA	7	True	AATAAA	-14	NA	32205670	32208682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_24433.known	chr12	-	555	3	FSM	ENSG00000111229.16	ENST00000471641.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATATATATTTT	-110423304	True	NA	NA	False	AATAAA	-24	NA	110450285	110442643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110443068_110445451_110445552_110450254
transcript_24435.known	chr12	-	1491	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	234.470658710036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTGCAGTGTCTAATT	-110461770	True	NA	-16	True	TATAAA	-42	NA	110468264	110452488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
transcript_24436.known	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_4	59.0772583062179	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-110461763	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
transcript_24438.known	chr12	-	1604	8	FSM	ENSG00000111231.9	ENST00000543199.5	1604	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	232.098940900959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCAGTGTCTAATTTG	-110468702	False	NA	-14	True	TATAAA	-44	NA	110468721	110452486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468471
transcript_24453.known	chr12	+	1101	7	FSM	ENSG00000204856.12	ENST00000377673.10	1101	7	0	0	0	0	multi-exon	FALSE	canonical	2	160	junction_4	39.0071218568553	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	110466502	True	NA	17	True	ATTAAA	-18	NA	110468844	110490385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486455_110486533_110486718_110487860_110487944_110490018
transcript_2446.known	chr1	+	1443	11	FSM	ENSG00000084623.12	ENST00000676554.1	1443	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	541.42334637509	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207676	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226148_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24475.known	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	754.103606940054	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-110485701	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
transcript_24478.known	chr12	-	996	5	FSM	ENSG00000111237.19	ENST00000447578.6	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	773.351916982172	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGATAACCTGTATT	-110485680	True	NA	-10	True	AATAAA	-17	NA	110502078	110491624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110502048
transcript_24479.known	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	763.751595743014	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-110485713	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
transcript_2448.known	chr1	+	1416	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	521.012667792253	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24486.known	chr12	-	1531	4	FSM	ENSG00000111237.19	ENST00000549578.6	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_3	98.3881203307707	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAACAAA	-110485713	True	NA	NA	False	AAAACA	-4	NA	110502111	110491082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110502048
transcript_2449.known	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	525.025561282496	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207674	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
transcript_24504.known	chr12	+	2309	15	FSM	ENSG00000204852.17	ENST00000551590.5	2309	15	0	0	0	0	multi-exon	TRUE	non_canonical	1	11	junction_10	10.1055652479014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	NA	False	NA	NA	False	NA	NA	NA	110614026	110649430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24506.known	chr12	+	1988	15	FSM	ENSG00000204852.17	ENST00000495659.6	1988	15	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_1	13.2764944967581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613246	True	NA	10	True	ATTAAA	-18	NA	110614106	110649128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614464_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24509.known	chr12	+	1531	12	FSM	ENSG00000204852.17	ENST00000549123.6	1531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.9926870721715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613252	True	NA	10	True	ATTAAA	-18	NA	110614112	110649128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110647210_110647337_110647748_110647894_110649042
transcript_2451.known	chr1	+	1256	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	564.102521108519	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207676	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24513.nic	chr12	-	1742	8	NIC	ENSG00000122986.14	novel	1685	8	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	26.2919247321768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTTTCCCTGGACC	-110689919	True	NA	-19	True	AATAAA	-22	NA	110689929	110648796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689725
transcript_24514.known	chr12	-	1215	7	FSM	ENSG00000122986.14	ENST00000439744.6	1215	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	37.3426327703634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTAGTTGTATATAAA	-110689665	True	NA	NA	False	NA	NA	NA	110689778	110649132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110688624_110688709_110689725
transcript_24516.known	chr12	+	2149	4	FSM	ENSG00000204852.17	ENST00000550703.6	2149	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATTTTGTCTCTT	NA	False	NA	NA	False	AATAGA	-27	NA	110614026	110630287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766
transcript_24518.known	chr12	+	926	3	FSM	ENSG00000204852.17	ENST00000546643.1	926	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTATCATCAGAGTGA	110613263	True	NA	NA	False	ATTAAA	-24	NA	110614123	110629282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110626361_110626493_110628766
transcript_2452.known	chr1	+	1400	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	219.738115733645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	32207693	True	NA	-66	True	AAAAAG	-2	NA	32222423	32231505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
transcript_24525.known	chr12	+	1044	3	FSM	ENSG00000185847.9	ENST00000654512.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGTGTAAGGAAGAAAA	110927267	True	NA	NA	False	AATATA	-34	NA	110936573	110943763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289_110938513_110943067
transcript_24527.known	chr12	+	717	3	FSM	ENSG00000185847.9	ENST00000548368.6	717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCTAAAATTTTCTGA	110927276	True	NA	NA	False	NA	NA	NA	110936582	110943701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289_110938513_110943323
transcript_24528.known	chr12	+	1416	3	FSM	ENSG00000185847.9	ENST00000553177.6	1416	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTTGACAATATGTTAA	110927271	True	NA	NA	False	ACTAAA	-24	NA	110936577	110959093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289_110938513_110958021
transcript_24529.known	chr12	+	364	2	FSM	ENSG00000185847.9	ENST00000331096.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	110927295	True	NA	20	True	AATAAA	-21	NA	110936601	110937451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110937184
transcript_2453.known	chr1	+	1200	10	FSM	ENSG00000084623.12	ENST00000677580.1	1200	10	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_5	548.986743414123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACAGAAGGTTTTGAA	32207702	True	NA	-34	True	AAAAAG	-34	NA	32222432	32231537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24530.known	chr12	+	1319	2	FSM	ENSG00000185847.9	ENST00000666099.2	1323	2	4	0	-2	0	multi-exon	FALSE	canonical	2	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTATCATGTTACACGTT	110927280	True	NA	NA	False	AATAAA	-16	NA	110936586	110939496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289
transcript_24531.known	chr12	+	1607	2	FSM	ENSG00000185847.9	ENST00000657482.1	1607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGACTCCTTT	110927276	True	NA	NA	False	AATAAA	-20	NA	110936582	110957964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110956473
transcript_24532.nnic	chr12	+	428	4	NNC	ENSG00000257595.3	novel	335	3	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTGGGGTCTCAGCG	NA	False	NA	10	True	AATAAA	-13	NA	111369207	111403307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_111369321_111371968_111372071_111396830_111396874_111403137
transcript_24533.known	chr12	+	335	3	FSM	ENSG00000257595.3	ENST00000552663.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGGGTCTCAGCGAGC	111369203	True	NA	13	True	AATAAA	-16	NA	111369260	111403310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111369321_111371968_111372071_111403137
transcript_24534.known	chr12	-	3996	12	FSM	ENSG00000089234.16	ENST00000419234.9	3996	12	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	21.0076727423479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCGTGTGAAATGT	-111679423	True	NA	-3	True	ATTAAA	-21	NA	111685956	111642145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685710
transcript_24536.known	chr12	+	4006	21	FSM	ENSG00000111271.15	ENST00000313698.9	4006	21	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	20.1702751592535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	111683168	True	NA	18	True	AGTAAA	-15	NA	111686052	111757099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_2454.known	chr1	+	1250	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	562.343311509971	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207697	True	NA	33	True	AATAAA	-34	NA	32222427	32231604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24542.known	chr12	+	9561	13	FSM	ENSG00000111275.13	ENST00000261733.7	9561	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_5	48.0597862620669	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTGATATTCTTTA	111764993	True	NA	NA	False	ATTAAA	-16	NA	111766932	111817532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111767097_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_24545.nic	chr12	+	1116	4	ISM	ENSG00000111271.15	ENST00000509936.5	1183	5	-5	3665	-1	-3665	5prime_fragment	FALSE	canonical	3	106	junction_3	16.8588914885357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCCTGATTTACTTCCA	111683178	True	NA	NA	False	AATAAA	-15	NA	111686062	111706327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737
transcript_24546.known	chr12	+	2951	18	FSM	ENSG00000111271.15	ENST00000413681.7	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	30.8623464607885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGCTATTGCTCACAG	111683183	True	NA	NA	False	AATAAA	-18	NA	111686067	111749132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010
transcript_24547.known	chr12	+	501	4	FSM	ENSG00000111271.15	ENST00000514615.5	501	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67.8822509939086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGAGGGTTTTTTACG	111683179	True	NA	NA	False	NA	NA	NA	111686063	111702262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111686240_111686350_111686375_111692696_111692897_111702161
transcript_24550.known	chr12	-	543	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	220	9	0	-4	multi-exon	FALSE	canonical	3	35	junction_3	59.606114526019	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTTTACTTACTTTGAG	-111837424	False	NA	-14	True	AATAAA	-13	NA	111841710	111839776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
transcript_24552.known	chr12	-	1957	3	FSM	ENSG00000234608.9	ENST00000456429.6	1961	3	0	4	0	0	multi-exon	FALSE	canonical	3	57	junction_1	57	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	NA	False	NA	-5	True	AATAAA	-22	NA	111842902	111839767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332_111840478_111841326
transcript_24553.known	chr12	-	662	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	5	-7	0	multi-exon	FALSE	canonical	3	23	junction_2	17	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-111837678	True	NA	-5	True	AATAAA	-22	NA	111841964	111839767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332_111840478_111841683
transcript_24557.nnic	chr12	-	666	3	FSM	ENSG00000234608.9	ENST00000688987.1	627	3	-44	5	9	0	multi-exon	FALSE	canonical	3	35	junction_2	10.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-111837688	True	NA	-10	True	AATAAA	-17	NA	111841974	111839772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111841326_111841471_111841683
transcript_24559.known	chr12	-	852	3	FSM	ENSG00000234608.9	ENST00000656227.2	1067	3	210	5	20	0	multi-exon	FALSE	canonical	3	35	junction_2	68	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-111837400	False	NA	-10	True	AATAAA	-17	NA	111841686	111839772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840478_111841326_111841471_111841683
transcript_24560.nic	chr12	-	1224	3	NIC	ENSG00000234608.9	novel	1961	3	NA	NA	-2	0	intron_retention	FALSE	canonical	2	3	junction_1	84	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGACCGTTTACTTAC	NA	False	NA	-20	True	AATAAA	-7	NA	111841985	111839782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_111840004_111840133_111840478_111841326
transcript_24561.known	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837616	True	NA	-4	True	AATAAA	-23	NA	111841902	111839766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840478_111841683
transcript_24563.nnic	chr12	-	873	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	-11	15	-11	0	multi-exon	FALSE	canonical	3	56	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-111837682	True	NA	-10	True	AATAAA	-17	NA	111841968	111839772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111841326
transcript_24564.known	chr12	-	2290	2	FSM	ENSG00000234608.9	ENST00000428207.4	2290	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTCTTTTGTTCTAG	NA	False	NA	-1	True	AATAAA	-26	NA	111842902	111839763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840478_111841326
transcript_2457.known	chr1	+	858	9	FSM	ENSG00000084623.12	ENST00000355082.10	858	9	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	220.442736328508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTTTGT	32207702	True	NA	NA	False	ATTAAA	-16	NA	32222432	32229254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134
transcript_24570.known	chr12	-	1534	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	9.86356933366416	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012335	True	NA	-5	True	AATAAA	-18	NA	112013165	111931297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_24573.known	chr12	-	1446	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_4	6.9602043392737	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	-112012295	True	NA	11	True	AATAAA	-34	NA	112013125	111931281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_24576.known	chr12	-	1403	10	FSM	ENSG00000198270.13	ENST00000355445.7	1403	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	12.3178080461472	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012309	True	NA	-5	True	AATAAA	-18	NA	112013139	111931297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_24579.nic	chr12	-	1395	10	NIC	ENSG00000198270.13	novel	1716	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	10.8775451115737	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTCATTTCAAAGCT	-112012336	True	NA	-6	True	AATAAA	-17	NA	112013166	111931298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_24583.known	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.13076718397471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	-112012305	True	NA	-77	True	NA	NA	NA	112013135	111931369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_24599.known	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	-112012355	True	NA	-5	True	AATAAA	-21	NA	112013185	112010424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112010400_112013200
transcript_2460.known	chr1	+	1141	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	555.607761262386	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24605.known	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1928	junction_2	99	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	111997694	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112013610_112019755_112019895_112022149
transcript_24608.known	chr12	+	1333	2	FSM	ENSG00000089248.7	ENST00000455836.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAATATATTGAACCAA	112013310	False	NA	-17	True	NA	NA	NA	112013347	112023220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112013610_112022149
transcript_24609.known	chr12	+	916	2	FSM	ENSG00000089248.7	ENST00000553161.1	916	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAAAAATTAGCTG	111997697	True	NA	NA	False	NA	NA	NA	112013428	112015325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112013610_112014590
transcript_2461.known	chr1	+	688	8	FSM	ENSG00000084623.12	ENST00000474371.2	688	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	568.190073112575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGTCTCTGCCTTTCCC	32207676	True	NA	NA	False	NA	NA	NA	32222406	32231054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926
transcript_24610.known	chr12	-	5771	24	FSM	ENSG00000111300.10	ENST00000261745.9	5771	24	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_18	14.678018749291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGTTCCTTTTT	-112105688	True	NA	0	True	TATAAA	-22	NA	112108783	112026688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112029654_112033232_112033380_112039228_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_24614.nic	chr12	-	2641	22	ISM	ENSG00000111300.10	ENST00000261745.9	5771	24	-15	12573	-2	0	5prime_fragment	FALSE	canonical	3	136	junction_16	14.5994129040471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	-112105703	True	NA	NA	False	AAAAAG	-1	NA	112108798	112039261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_24617.known	chr12	+	2633	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	21.5326006920201	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	112121761	True	NA	15	True	AATAAA	-19	NA	112125559	112153604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_24625.known	chr12	-	1074	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	1588	junction_6	3626.88660867999	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGACTACATTTTGTG	-112279264	True	NA	-33	True	NA	NA	NA	112409596	112405202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
transcript_24630.known	chr12	-	921	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_6	1778.01750553812	21167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	-112279273	True	NA	-19	True	ATTAAA	-14	NA	112409605	112405188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_24633.known	chr12	-	4380	20	FSM	ENSG00000123064.13	ENST00000314045.11	4380	20	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	65.8698035895868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAGGGTGAACTTA	-113176711	True	NA	-2	True	AATAAA	-25	NA	113185479	113157173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_24635.known	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	59.5755531858171	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-113176710	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_24640.known	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	14.3527000944073	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	113183222	True	NA	13	True	AATAGA	-18	NA	113185720	113192368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
transcript_24642.nic	chr12	+	1211	3	ISM	ENSG00000139405.16	ENST00000548278.2	1858	4	-161	5069	18	-5	5prime_fragment	FALSE	canonical	3	222	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGATGGTGAACTCC	113185438	True	NA	3	True	AATAAA	-13	NA	113185559	113187299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_113186022_113186184_113186317_113186682
transcript_24643.known	chr12	+	1898	3	FSM	ENSG00000139405.16	ENST00000552495.1	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	104.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATGAATGTCACTTT	113185417	False	NA	6	True	AATAGA	-11	NA	113185541	113192361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113186022_113186682_113187049_113191309
transcript_24645.known	chr12	-	1670	5	FSM	ENSG00000166578.10	ENST00000416617.3	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.27760839478607	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	-113220882	True	NA	-8	True	AATAAA	-23	NA	113221094	113195445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113195890_113197540_113197613_113200579_113200814_113207437_113208260_113220996
transcript_24650.known	chr12	+	1306	8	FSM	ENSG00000139410.15	ENST00000403593.9	1306	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	3.35638289270592	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	113422315	True	NA	3	True	AATAAA	-16	NA	113422379	113438276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113422478_113427961_113428157_113428419_113428460_113429159_113429300_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_24653.known	chr12	-	1605	8	FSM	ENSG00000135094.11	ENST00000257549.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.451753951452626	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGTGCATTTTCCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	113403887	113392444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113393150_113393891_113394017_113397164_113397393_113398514_113398607_113398706_113398847_113399111_113399152_113399555_113399711_113403767
transcript_24654.known	chr12	+	522	2	FSM	ENSG00000257935.3	ENST00000551357.3	545	2	11	12	0	-3	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACGAATCTGCCCT	113471918	True	NA	NA	False	AATAAA	-40	NA	113472002	113480624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113472083_113480182
transcript_24655.known	chr12	-	3402	3	FSM	ENSG00000249550.8	ENST00000655514.1	3402	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCCACAAGATTCAGA	NA	False	NA	NA	False	AATAAA	-9	NA	113773726	113743439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113746596_113767074_113767209_113773614
transcript_24657.known	chr12	-	3574	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	63.3544783780559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTCTTCATT	-113957338	True	NA	-1	True	AGTAAA	-25	NA	113966310	113822053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_24658.known	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_14	29.5597821090833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	-113957353	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_24659.known	chr12	-	4422	25	FSM	ENSG00000122965.11	ENST00000545145.6	4422	25	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	60.8791921896691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTTGCATAATAATAAT	-113957334	True	NA	NA	False	AATAAA	-11	NA	113966306	113816741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113818187_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_2466.known	chr1	+	987	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	645.557381906003	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24661.known	chr12	+	1597	2	FSM	ENSG00000196668.4	ENST00000480237.1	1597	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	116532804	True	NA	NA	False	NA	NA	NA	116533421	116535521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_116533463_116533965
transcript_24663.known	chr12	+	543	2	FSM	ENSG00000196668.4	ENST00000489452.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTCTGTCGGGAAT	116532850	True	NA	NA	False	NA	NA	NA	116533467	116534359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_116533617_116533965
transcript_24665.known	chr12	+	2415	11	FSM	ENSG00000135119.15	ENST00000407967.7	2415	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	14.3892320851392	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTGTGGTCTTGAT	116734416	True	NA	25	True	AATAAA	-19	NA	116738290	116853631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116852649
transcript_24667.known	chr12	-	5789	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-116881425	False	NA	-7	True	ATTAAA	-21	NA	116881441	116856143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_116861467_116880975
transcript_24669.known	chr12	+	4648	11	FSM	ENSG00000174989.13	ENST00000455858.2	4648	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	16.6324983090334	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	116908911	True	NA	17	True	ATTAAA	-14	NA	116910964	117031148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_116911158_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_2467.known	chr1	-	969	7	FSM	ENSG00000160055.20	ENST00000483001.5	969	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16.996731711976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCCAGGGACAAGG	-32221841	True	NA	NA	False	GGGGCT	-30	NA	32222335	32215846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_24673.known	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	44.9763941758102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	-117179417	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_24674.known	chr12	-	2906	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	97.6294224720776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTGAAGGGAAAAAAAG	-117179403	True	NA	44	True	AATGAA	-20	NA	117190456	117145067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_24681.known	chr12	-	2554	11	FSM	ENSG00000135108.16	ENST00000550180.5	2554	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	144.100659262892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTCACACCTCTTGTT	-117179233	False	NA	63	True	AAAAAG	-19	NA	117190286	117145048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_24683.known	chr12	-	4138	13	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	138.117175494819	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAAATGGCCTGCCCAAT	-117179418	True	NA	-6	True	AATAAA	-22	NA	117190471	117143780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217_117190278_117190326
transcript_2469.known	chr1	-	721	6	FSM	ENSG00000160055.20	ENST00000344461.7	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	14.9452333538155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-32221844	True	NA	-3	True	AATAAA	-16	NA	32222338	32216199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_24692.known	chr12	+	2449	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	140.052764555021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011062	True	NA	NA	False	AATAAA	-24	NA	118016721	118032234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_24696.known	chr12	+	2104	11	FSM	ENSG00000111445.14	ENST00000454402.7	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	40.5344298097309	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011043	True	NA	NA	False	AATAAA	-24	NA	118016702	118032234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_24704.known	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	32.5921769754645	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	-118058226	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
transcript_24706.known	chr12	-	5009	9	FSM	ENSG00000176834.14	ENST00000359236.10	5009	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	11.4864050076601	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTGATCTTGATT	-118099454	True	NA	-17	True	AATAAA	-16	NA	118104011	118063592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
transcript_24712.known	chr12	-	1865	2	FSM	ENSG00000176834.14	ENST00000612851.1	1865	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTACTCTGTAAATAATA	-118099328	True	NA	-5	True	AATAAA	-18	NA	118103885	118101604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118103177_118103592
transcript_24716.known	chr12	+	1431	4	FSM	ENSG00000089220.5	ENST00000261313.3	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	5497	junction_2	227.453047657948	5641	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTCCCCGGATGT	118083316	True	NA	15	True	AATAAA	-19	NA	118136123	118145584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118136345_118138038_118138149_118139450_118139552_118144585
transcript_24717.known	chr12	-	4346	21	FSM	ENSG00000135090.14	ENST00000392533.8	4346	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.38137816829667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTTGCTGTGTTATTGT	-118371993	True	NA	-3	True	AATAAA	-14	NA	118372907	118149800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_24718.nic	chr12	-	1402	12	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-27	51560	-27	61	5prime_fragment	FALSE	canonical	3	30	junction_5	4.09998992137443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAATACTTTTCCAA	-118372020	True	NA	NA	False	NA	NA	NA	118372934	118201360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_24719.known	chr12	-	2147	8	FSM	ENSG00000135090.14	ENST00000537952.1	2147	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	12.6135657455109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAGAAAAAAATTCAG	NA	False	NA	NA	False	ATTAAA	-34	NA	118190545	118150956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806
transcript_2472.known	chr1	-	972	5	FSM	ENSG00000160055.20	ENST00000487174.1	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	20.8686367547092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGCTACCTCATGGA	-32221825	True	NA	NA	False	NA	NA	NA	32222319	32216729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866
transcript_24720.known	chr12	+	879	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTTTTTATACAAGAAA	118244889	False	NA	NA	False	NA	NA	NA	118246083	118246962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118246100_118247000
transcript_24721.known	chr12	+	590	1	FSM	ENSG00000275759.1	ENST00000619032.1	590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGTCCCTTACTTTGTG	NA	False	NA	9	True	AATAAA	-17	NA	118428280	118428870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118428300_118428900
transcript_24722.known	chr12	-	530	3	FSM	ENSG00000255618.2	ENST00000668907.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	-118774490	True	NA	0	True	AATAAA	-22	NA	118774578	118773030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118773303_118773610_118773776_118774485
transcript_24723.known	chr12	+	1861	3	FSM	ENSG00000152137.8	ENST00000281938.7	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTGGTTCTTTTAA	119178876	True	NA	NA	False	AATAAA	-17	NA	119178930	119194746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_119179680_119187024_119187089_119193698
transcript_24726.known	chr12	+	2303	8	FSM	ENSG00000111725.11	ENST00000541640.5	2303	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	74.0510028318872	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGGAGGAGCTCT	119664588	True	NA	NA	False	AATAAA	-21	NA	119667863	119681624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_119668046_119668235_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_24727.nic	chr12	+	2574	8	NIC	ENSG00000111725.11	novel	2219	7	NA	NA	88	0	intron_retention	FALSE	canonical	3	12	junction_1	103.02902305582	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119664676	True	NA	NA	False	AATAAA	-16	NA	119667951	119681619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_119668404_119671494_119671669_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_24729.known	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	17.763883459299	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119668061	False	NA	NA	False	AATAAA	-16	NA	119668132	119681619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_2473.known	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	11.1887220003001	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-32221859	True	NA	-3	True	AATAAA	-16	NA	32222353	32216199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_24733.nic	chr12	-	1096	7	ISM	ENSG00000122966.17	ENST00000612548.4	1799	13	-32	144753	0	-50357	5prime_fragment	FALSE	canonical	3	31	junction_2	6.31576510716547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTCTTCATTTTCCTT	-119874764	True	NA	NA	False	AATAAA	-18	NA	119877320	119832512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
transcript_24734.known	chr12	-	2855	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	13.0169120762184	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCAGGGTCTGTTT	-120110905	True	NA	-13	True	AATAAA	-17	NA	120116753	120095098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_24740.known	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_51	120.115590168549	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	-120194702	False	363403	16	True	ATTAAA	-32	NA	120194715	120127201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_24746.known	chr12	-	1257	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_7	7723.53932297036	4230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-120201182	False	29	-27	True	AATAAA	-14	NA	120201211	120196706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
transcript_2476.known	chr1	-	1411	4	FSM	ENSG00000160055.20	ENST00000373593.5	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	12.8322510366134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTAGTAAGTATTCTTT	-32221849	True	NA	0	True	AATAAA	-19	NA	32222343	32216196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32217352_32221130_32221198_32221866_32222019_32222306
transcript_24774.known	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_5	950.899574087611	4626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	-119837696	True	NA	-19	True	AATAAA	-22	NA	120201099	120196698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
transcript_24775.known	chr12	-	1105	8	FSM	ENSG00000089157.16	ENST00000392514.9	1105	8	0	0	0	0	multi-exon	FALSE	canonical	3	12712	junction_7	3706.12973769849	34660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	-119837708	True	NA	-19	True	AATAAA	-22	NA	120201111	120196698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_24776.known	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	8232.53952933363	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-119837707	True	NA	-28	True	AATAAA	-13	NA	120201110	120196707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
transcript_24777.known	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	8306.22807148408	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837707	True	NA	-22	True	AATAAA	-19	NA	120201110	120196701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_24778.known	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	8441.68654982851	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837704	True	NA	-22	True	AATAAA	-19	NA	120201107	120196701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_24779.known	chr12	-	2591	6	FSM	ENSG00000089157.16	ENST00000552461.5	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_5	1031.85685053693	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-119837707	True	NA	-27	True	AATAAA	-14	NA	120201110	120196706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309
transcript_24780.known	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	TRUE	canonical	3	520	junction_5	101.323491846659	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	-120256502	True	NA	-6	True	AATAAA	-19	NA	120265771	120210446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_24781.known	chr12	+	1170	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	29	0	-1	0	multi-exon	FALSE	canonical	3	17	junction_4	87.7624635023425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	120199265	True	NA	NA	False	NA	NA	NA	120201370	120213138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
transcript_24782.known	chr12	+	707	4	FSM	ENSG00000255857.7	ENST00000542314.6	780	4	36	37	2	-37	multi-exon	FALSE	canonical	3	26	junction_3	82.174610839764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAAATAAAATCAAA	120199221	True	NA	-29	True	CATAAA	-42	NA	120201326	120210519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210085
transcript_24784.known	chr12	+	2525	4	FSM	ENSG00000255857.7	ENST00000667017.1	2525	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	79.3767388260986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTGAAAATACAAAAAA	120199250	True	NA	NA	False	NA	NA	NA	120201355	120213210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929
transcript_24786.known	chr12	+	1166	4	FSM	ENSG00000255857.7	ENST00000542265.7	1183	4	17	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	29.1471363182656	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCATGGGGGCGTG	120199185	True	NA	NA	False	AATACA	-7	NA	120201290	120213231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120212374
transcript_24787.known	chr12	+	716	4	FSM	ENSG00000255857.7	ENST00000667721.2	748	4	26	6	-6	-4	multi-exon	FALSE	canonical	2	5	junction_2	86.3288287113098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGGTCTCACTA	120199260	True	NA	10	True	AATAAA	-10	NA	120201365	120212765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206713_120209838_120209935_120212374
transcript_24789.nic	chr12	+	947	3	FSM	ENSG00000255857.7	ENST00000693683.1	914	3	-33	0	1	0	multi-exon	FALSE	canonical	3	184	junction_2	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGACTCAGAGAATGGA	120199169	True	NA	8	True	AATAAA	-24	NA	120201274	120210556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838
transcript_2479.known	chr1	-	1169	4	FSM	ENSG00000220785.8	ENST00000403496.7	1172	4	0	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.93310961716756	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	-32240240	False	NA	-3	True	AATAAA	-18	NA	32240422	32231659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32231970_32232041_32232185_32234951_32235114_32239868
transcript_24790.nnic	chr12	+	606	3	NIC	ENSG00000255857.7	novel	1183	4	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	68.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGGTCTCACTA	120199202	True	NA	10	True	AATAAA	-10	NA	120201307	120212765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_120201427_120209838_120209935_120212374
transcript_24791.nnic	chr12	+	936	4	NNC	ENSG00000089163.4	novel	1217	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	5.79271573232759	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATGCTTCATGAAT	120302168	True	NA	13	True	AATAAA	-16	NA	120302320	120313241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_120302379_120303560_120303786_120312455_120312751_120312883
transcript_24792.known	chr12	+	1217	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.78423336480244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	120302168	True	NA	21	True	AATAAA	-24	NA	120302320	120313249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
transcript_24800.known	chr12	+	4238	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	36.6090456338624	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	120442224	True	NA	NA	False	AATAAA	-18	NA	120446443	120463749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
transcript_24806.known	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3862	junction_2	305.375179083042	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120437366	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
transcript_24807.known	chr12	+	537	3	FSM	ENSG00000111775.3	ENST00000229379.3	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	9924	junction_2	426	1707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTCATGAGCTGAGAG	120396065	True	NA	17	True	AATAAA	-14	NA	120438112	120440730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120438230_120438378_120438522_120440453
transcript_24809.known	chr12	-	1153	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTTGGAATAGCTGTG	-120443565	True	NA	NA	False	NA	NA	NA	120446370	120444207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120444956_120445965
transcript_24810.known	chr12	-	1151	2	FSM	ENSG00000170855.4	ENST00000546954.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	0	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCCTCTGGAACTCA	-120443579	True	NA	-14	True	AATAAA	-23	NA	120446384	120443963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120444956_120446225
transcript_24811.known	chr12	+	662	5	FSM	ENSG00000088986.11	ENST00000548342.5	662	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1657.89271365791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCATCCAAAAACAAGGA	120469648	False	NA	NA	False	NA	NA	NA	120469882	120498237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120470105_120488116_120488178_120488577_120488654_120496415_120496554_120498072
transcript_24814.known	chr12	+	814	3	FSM	ENSG00000088986.11	ENST00000392509.6	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1901.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120469615	True	NA	13	True	AATAAA	-16	NA	120469849	120498493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120470105_120496415_120496554_120498072
transcript_24816.known	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_1	38	3453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120444868	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496217_120496415_120496554_120498072
transcript_24817.known	chr12	+	697	3	FSM	ENSG00000088986.11	ENST00000392508.2	697	3	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	1761	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTGTGTGAATTACAA	120444846	True	NA	11	True	AATAAA	-14	NA	120496090	120498491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496217_120496401_120496554_120498072
transcript_24820.known	chr12	+	616	2	FSM	ENSG00000088986.11	ENST00000548214.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCCGGGCCGGGAGGA	120444837	True	NA	NA	False	NA	NA	NA	120496081	120496896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496217_120496415
transcript_24822.known	chr12	-	1214	2	FSM	ENSG00000248008.4	ENST00000668253.2	1218	2	0	4	0	-4	multi-exon	FALSE	canonical	3	76	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGTTCCTCAT	NA	False	NA	-3	True	ATTAAA	-18	NA	120495946	120491020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120492111_120495822
transcript_24823.known	chr12	+	670	1	FSM	ENSG00000088986.11	ENST00000552316.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120497802	False	NA	13	True	AATAAA	-16	NA	120497823	120498493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120497800_120498500
transcript_24824.known	chr12	+	719	2	FSM	ENSG00000088986.11	ENST00000549989.1	719	2	0	0	0	0	multi-exon	FALSE	canonical	3	3839	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTGTACTAGTTTG	120444868	True	NA	-18	True	NA	NA	NA	120496112	120498350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496554_120498072
transcript_24826.nic	chr12	-	1596	8	NIC	ENSG00000110871.15	novel	1506	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_7	162.3676855354	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	-120522407	True	NA	-5	True	AGTAAA	-17	NA	120529158	120503278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120526456_120526547_120528939
transcript_24827.known	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	23.0849879070072	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	-120522407	True	NA	-5	True	AGTAAA	-17	NA	120529158	120503278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
transcript_2483.known	chr1	+	1482	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	0	0	0	0	multi-exon	FALSE	canonical	3	1560	junction_6	107.150983818784	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207706	True	NA	31	True	AATAAA	-32	NA	32222436	32231602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24832.known	chr12	-	701	2	FSM	ENSG00000110871.15	ENST00000547448.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAAAAATTAGCCGGG	-120522403	True	NA	NA	False	ACTAAA	-2	NA	120529154	120526892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120527379_120528939
transcript_24838.known	chr12	-	794	5	FSM	ENSG00000167272.11	ENST00000543355.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	413.762839679931	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTACCTAGCATTCCC	-120575012	True	NA	-155	True	NA	NA	NA	120581381	120579153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120580995_120581258_120581342
transcript_24839.known	chr12	-	1086	5	FSM	ENSG00000167272.11	ENST00000357500.5	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	157.939861972841	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-120575033	True	NA	NA	False	NA	NA	NA	120581402	120578763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114_120581258_120581342
transcript_2484.known	chr1	+	1300	9	FSM	ENSG00000084623.12	ENST00000676957.1	1300	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	578.317765160297	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTGGTCAGATATTT	32207708	True	NA	16	True	AATAAA	-17	NA	32222438	32231587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_24841.nnic	chr12	-	858	5	NNC	ENSG00000167272.11	novel	1086	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	411.933247019466	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	-120575035	True	NA	-49	True	AATAAA	-18	NA	120581404	120579047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_120579413_120579513_120579652_120579773_120579924_120581114_120581258_120581342
transcript_24847.known	chr12	-	913	4	FSM	ENSG00000167272.11	ENST00000341039.6	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	382.967361533591	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-120575010	True	NA	NA	False	NA	NA	NA	120581379	120578763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120581114_120581258_120581342
transcript_2485.known	chr1	+	2099	13	FSM	ENSG00000182866.17	ENST00000619559.4	2099	13	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	15.5802135914613	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	32270743	True	NA	14	True	AATAAA	-21	NA	32274110	32286164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_24851.known	chr12	-	718	2	FSM	ENSG00000167272.11	ENST00000539716.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTAAATGCAGATAGA	-120575029	True	NA	NA	False	NA	NA	NA	120581398	120580595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120581258_120581342
transcript_24854.known	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_3	147.443397802532	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	-120574967	True	NA	-49	True	AATAAA	-18	NA	120581336	120579047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
transcript_24855.nnic	chr12	+	1779	7	NNC	ENSG00000157782.10	novel	1857	6	NA	NA	-978	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.6351920885484	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCCGTGATGGTCTTTC	120649056	True	NA	16	True	AATAAA	-18	NA	120649106	120667324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_120649823_120656092_120656273_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_24856.known	chr12	+	1369	7	FSM	ENSG00000157782.10	ENST00000288616.7	1369	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.8893457540545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGCCCACCCCGGACCCC	120650012	False	NA	NA	False	NA	NA	NA	120650084	120667032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120650683_120656092_120656273_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_24857.known	chr12	+	770	6	FSM	ENSG00000157782.10	ENST00000351200.6	770	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.4243721341182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCACCCCGGACCCCCAC	120650494	False	NA	NA	False	NA	NA	NA	120650506	120667035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120650683_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_24858.known	chr12	-	496	2	FSM	ENSG00000256008.3	ENST00000544339.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGAGACCACAATC	-120639949	False	NA	NA	False	ATTAAA	-25	NA	120640153	120630104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120630497_120640049
transcript_24859.known	chr12	+	6341	5	FSM	ENSG00000110917.8	ENST00000228506.8	6341	5	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_2	51.0899941280091	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	120651873	True	NA	45	True	AATAAA	-16	NA	120687148	120701859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315
transcript_24860.known	chr12	+	1859	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_4	11.4611528517579	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	120725368	True	NA	10	True	AATAAA	-16	NA	120725825	120740008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_24863.known	chr12	-	4469	6	FSM	ENSG00000157895.11	ENST00000288757.7	4469	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	35.9444015112229	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACTGATGGCAATGGT	-121012232	True	NA	2	True	AATAAA	-27	NA	121016487	121000485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121004490_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_24866.known	chr12	+	1836	13	FSM	ENSG00000135124.16	ENST00000359949.11	1836	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	33.8472877626685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGAGGACCAGACATTAA	121210054	False	NA	-32	True	NA	NA	NA	121210064	121234070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121216954_121217003_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_24869.known	chr12	+	1084	12	FSM	ENSG00000135124.16	ENST00000542067.5	1084	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	30.338585202117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTACCCCACACCTGG	121208357	False	NA	NA	False	NA	NA	NA	121210164	121233547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121222963_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_24872.known	chr12	+	1760	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	9.85682630431258	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_24878.known	chr12	+	1612	11	FSM	ENSG00000135124.16	ENST00000543984.5	1612	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	28.1424945589406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_24883.nic	chr12	+	1515	10	NIC	ENSG00000135124.16	novel	1612	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	37.6917320730511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_121210299_121221912_121221985_121222093_121222167_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_24891.known	chr12	-	2006	16	FSM	ENSG00000110931.19	ENST00000412367.6	2006	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	16.8673254153309	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	-121295392	True	NA	19	True	TTTAAA	-20	NA	121296686	121240524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_24896.known	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_8	175.936323264271	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	-121341331	True	NA	-26	True	AATAAA	-15	NA	121352388	121308356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_24899.known	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_8	135.416025639508	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	-121341354	True	NA	86	True	AATAAA	-19	NA	121352411	121308244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_2491.known	chr1	+	2091	13	FSM	ENSG00000182866.17	ENST00000336890.10	2091	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	57.0233870150368	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTTGCTGTCCACTC	32251212	False	NA	15	True	AATAAA	-22	NA	32251264	32286165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32251372_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_24914.nic	chr12	-	1497	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	118.508112969139	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-121573971	True	NA	29	True	NA	NA	NA	121579670	121516346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_24915.nic	chr12	-	1674	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	115.089766360818	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-121580146	False	NA	29	True	NA	NA	NA	121580255	121516346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_24917.nic	chr12	-	1120	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-26	-34	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	119.811889597355	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCATTTGTTTTCACCCA	-121573971	True	NA	-5	True	AATAAA	-29	NA	121579670	121516380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121516521_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_24934.known	chr12	+	2051	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	183.558044104734	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	121392482	True	NA	24	True	AATAAA	-16	NA	121400118	121424348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_24939.known	chr12	+	2066	6	FSM	ENSG00000170633.17	ENST00000361234.10	1986	6	-77	-3	-42	-1	multi-exon	FALSE	canonical	3	433	junction_1	16.2308348522188	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATTGTCTTGGTCA	121392404	True	NA	27	True	AATAAA	-19	NA	121400040	121424351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_2494.known	chr1	+	2118	14	FSM	ENSG00000116478.12	ENST00000373548.8	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_6	56.1193782519427	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	32282665	True	NA	16	True	AATAAA	-17	NA	32292082	32333626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_24951.known	chr12	+	1449	5	FSM	ENSG00000170633.17	ENST00000613529.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	190.469649813297	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACATTGTCTTGGTCAG	121392446	True	NA	28	True	AATAAA	-20	NA	121400082	121424352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121417860_121417912_121420241_121420335_121420576_121420779_121423385
transcript_24957.known	chr12	+	593	2	FSM	ENSG00000170633.17	ENST00000555076.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTATTTTTAACTTAA	121392510	True	NA	NA	False	NA	NA	NA	121400146	121423906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121423385
transcript_24959.nic	chr12	-	945	6	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	9.57078889120432	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121802577	True	NA	0	True	AATAAA	-19	NA	121802945	121795266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
transcript_24961.known	chr12	-	2435	5	FSM	ENSG00000139725.8	ENST00000267205.7	2435	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26.1569780364629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTCCTTTCTGCATT	-121792359	True	NA	-5	True	AATAAA	-21	NA	121793688	121777753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121779663_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_24963.nic	chr12	-	1043	5	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	25	junction_1	10.6858551365813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121802863	False	NA	0	True	AATAAA	-19	NA	121802949	121795266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630
transcript_24965.known	chr12	-	1024	5	FSM	ENSG00000212694.8	ENST00000428029.6	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	9.44391338376205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGCTCAGGGCCCGGC	-121802847	False	NA	NA	False	NA	NA	NA	121802933	121795639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
transcript_24966.known	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	19.7709101684492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	-121794106	False	NA	-73	True	NA	NA	NA	121794262	121780486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
transcript_24967.known	chr12	-	875	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	10.8730042868667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTGTGCAAGCTTGT	-121802575	True	NA	NA	False	NA	NA	NA	121802943	121795892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
transcript_24968.known	chr12	-	1220	4	FSM	ENSG00000212694.8	ENST00000542933.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	20.0055547841649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121802824	False	NA	0	True	AATAAA	-19	NA	121802910	121795266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802878
transcript_24971.known	chr12	-	1419	14	FSM	ENSG00000158104.11	ENST00000289004.8	1419	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.72160242458822	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTCTGTGTTTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	121858859	121839526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121839839_121839931_121840049_121843709_121843833_121846861_121846934_121847051_121847215_121848998_121849077_121849686_121849791_121854702_121854793_121856323_121856407_121856582_121856626_121857327_121857433_121857756_121857820_121858686_121858714_121858820
transcript_24973.known	chr12	+	3420	18	FSM	ENSG00000158023.10	ENST00000397454.2	3420	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_16	4.56024645725042	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTCTCAGTTATGT	121918247	True	NA	6	True	AATAAA	-18	NA	121918591	121972069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121918709_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121971557
transcript_24977.known	chr12	+	2725	6	FSM	ENSG00000110801.14	ENST00000541212.6	2725	6	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	11.1642285895623	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGAGTTCATACTTCTC	121883582	True	NA	NA	False	NA	NA	NA	121888789	121918297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915855_121915945_121916283
transcript_24978.known	chr12	+	1001	6	FSM	ENSG00000110801.14	ENST00000543699.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	179.209821159444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGGTGTGATTATT	121883637	True	NA	9	True	NA	NA	NA	121888844	121916584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121894738_121894842_121899633_121899890_121903005_121903108_121915855_121915945_121916283
transcript_24979.known	chr12	+	793	5	FSM	ENSG00000110801.14	ENST00000540962.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	192.321833133942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTGTGGGCAAGTGGG	121883554	True	NA	-26	True	NA	NA	NA	121888761	121916549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121894738_121894842_121903005_121903108_121915855_121915945_121916283
transcript_24980.known	chr12	+	516	4	FSM	ENSG00000110801.14	ENST00000542602.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	212.870852866239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGATCTGGAAGAGGC	121883578	True	NA	NA	False	NA	NA	NA	121888785	121916399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121903005_121903108_121915855_121915945_121916283
transcript_24982.nic	chr12	+	719	4	ISM	ENSG00000256546.3	ENST00000540968.2	1055	5	933	10	5	0	3prime_fragment	FALSE	canonical	1	11	junction_1	16.6799946709291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCACAAAATTCACTCAAA	122063286	True	NA	5	True	ATTAAA	-17	NA	122064281	122068558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_122064434_122064549_122064683_122068027_122068192_122068288
transcript_24984.nnic	chr12	+	978	4	NNC	ENSG00000256546.3	novel	850	3	NA	NA	5	6114	intron_retention	FALSE	non_canonical	0	0	junction_3	20.3141986469235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTATTGCTGCTTT	122063286	True	NA	14	True	AATAAA	-31	NA	122064281	122074730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_122064683_122068027_122068192_122068288_122068634_122074662
transcript_24986.known	chr12	+	850	3	FSM	ENSG00000256546.3	ENST00000653475.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	16	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACTCAAAATAGATCATA	122063281	True	NA	15	True	ATTAAA	-27	NA	122064276	122068568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122064683_122068027_122068192_122068288
transcript_24990.known	chr12	-	2495	14	FSM	ENSG00000139719.11	ENST00000544349.6	2495	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	154.186009234907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCATCCTCTAATCCC	-122262390	False	NA	-18	True	AATAAA	-6	NA	122266336	122231562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122264711_122264805_122266306
transcript_24992.known	chr12	-	4559	13	FSM	ENSG00000139719.11	ENST00000267199.9	4559	13	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	52.4711560976335	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCTTGCTATA	-122262548	True	NA	-34	True	AATAAA	-17	NA	122266494	122229563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25.known	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00062_+_0_1000
transcript_25007.known	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	258.274832085685	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-122216471	True	NA	39	True	NA	NA	NA	122226039	122207793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_25010.known	chr12	-	1471	6	FSM	ENSG00000184047.20	ENST00000464942.7	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_4	66.7311021938046	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGCAGCCTCCTTCC	-122216484	True	NA	-5	True	NA	NA	NA	122226052	122207667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_25011.known	chr12	-	1336	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	247.787489595419	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCCTCTTGTTCCTTC	-122216484	True	NA	-25	True	NA	NA	NA	122226052	122207773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
transcript_25014.known	chr12	-	732	6	FSM	ENSG00000184047.20	ENST00000541656.6	732	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	232.810652677235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCCCGGAAAGCAGAA	-122216405	True	NA	NA	False	NA	NA	NA	122225973	122208505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225786
transcript_2502.nnic	chr1	+	2039	13	NIC	ENSG00000116478.12	novel	2118	14	NA	NA	-14	0	combination_of_known_splicesites	TRUE	canonical	3	46	junction_6	317.679870309719	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	32282651	True	NA	16	True	AATAAA	-17	NA	32292068	32333626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_25022.known	chr12	-	2573	6	FSM	ENSG00000139719.11	ENST00000542790.2	2573	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	40.8685698306168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTAAAAATACACACACAC	-122262485	True	NA	NA	False	NA	NA	NA	122266431	122248095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25024.known	chr12	-	1859	5	FSM	ENSG00000184047.20	ENST00000443649.9	1859	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	264.581154846675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCCTTCCTTGAG	-122226536	False	NA	0	True	NA	NA	NA	122226568	122207662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122225964
transcript_25025.known	chr12	-	1338	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	240.992090119157	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATGCAGCCTCCTTC	-122216484	True	NA	-6	True	NA	NA	NA	122226052	122207668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
transcript_25026.known	chr12	-	555	5	FSM	ENSG00000184047.20	ENST00000541273.6	555	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	271.366334500063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAGGCCTACCTGCGT	-122216471	True	NA	NA	False	AAAACA	-32	NA	122226039	122208409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224644_122224749_122225964
transcript_25031.nic	chr12	-	855	5	ISM	ENSG00000139719.11	ENST00000542790.2	2573	6	-69	2724	-6	2042	5prime_fragment	FALSE	canonical	3	440	junction_2	30.1610261761764	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTACTCATGGTGCTTT	-122262554	True	NA	-1	True	ATTAAA	-21	NA	122266500	122250819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25032.known	chr12	-	1173	5	FSM	ENSG00000139719.11	ENST00000451053.3	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	212.017098367089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGTTTCAGGTA	-122262470	True	NA	1	True	AATAAA	-20	NA	122266416	122252861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122253544_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25033.nic	chr12	-	811	4	ISM	ENSG00000139719.11	ENST00000451053.3	1173	5	-84	8163	-6	-8163	5prime_fragment	FALSE	canonical	3	440	junction_1	34.7786652353933	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGACTTGTCTTTTAA	-122262554	True	NA	NA	False	TATAAA	-20	NA	122266500	122261024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25034.known	chr12	+	2891	3	FSM	ENSG00000176383.9	ENST00000324189.5	2891	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	122203494	True	NA	NA	False	AATAAA	-21	NA	122203708	122208952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122203802_122204521_122204685_122206317
transcript_25035.known	chr12	+	2749	2	FSM	ENSG00000176383.9	ENST00000546192.1	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCATCACCTTGACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	122203680	122208945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122203802_122206317
transcript_25036.known	chr12	+	663	3	FSM	ENSG00000176383.9	ENST00000545141.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	122203514	True	NA	NA	False	AATAAA	-21	NA	122203728	122208952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122203802_122207695_122207813_122208479
transcript_25038.known	chr12	-	4255	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	0	0	0	0	multi-exon	TRUE	non_canonical	3	77	junction_8	25.0830572959839	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	-122501054	False	NA	-4	True	AATAAA	-19	NA	122501073	122471598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_25044.nnic	chr12	-	2666	11	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	64	0	combination_of_known_splicesites	FALSE	non_canonical	1	1	junction_6	42.6595827452637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGACTTTGAATACAAA	-122499223	True	NA	-3	True	AATAAA	-20	NA	122501009	122472892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_25045.known	chr12	+	455	1	FSM	ENSG00000275265.1	ENST00000619123.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCTTTGCTACAGAGA	122501166	False	NA	NA	False	AATAAA	-26	NA	122501186	122501641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122501200_122501600
transcript_25067.known	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	273.596710506541	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518819	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25068.known	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	264.913646307622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518883	True	NA	-40	True	AATAAA	-13	NA	122527000	122505058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25079.nic	chr12	-	2039	11	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_7	276.625812244628	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518899	True	NA	-40	True	AATAAA	-13	NA	122527016	122505058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25081.known	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	132.875881934985	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	-122518819	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_25082.nic	chr12	-	2272	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-16	333	combination_of_known_junctions	FALSE	canonical	3	378	junction_3	142.767703924769	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCATGCTTTTTGC	-122518899	True	NA	NA	False	AATAAA	-15	NA	122527016	122504725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_25088.nic	chr12	-	1939	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	378	junction_3	142.767703924769	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518899	True	NA	-40	True	AATAAA	-13	NA	122527016	122505058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_25105.known	chr12	-	1041	8	FSM	ENSG00000111011.18	ENST00000527399.3	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	340.791395886404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	-122518878	True	NA	NA	False	AAGAAA	-8	NA	122526995	122511110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122511189_122515104_122515228_122517230_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25107.known	chr12	-	1146	9	FSM	ENSG00000111011.18	ENST00000525335.6	1146	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	339.162732880545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGCTTTGGCAGGGC	-122518832	True	NA	NA	False	AATGAA	-24	NA	122526949	122508249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122508448_122511108_122511189_122514711_122514729_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522330_122526847
transcript_25111.known	chr12	+	331	2	FSM	ENSG00000184445.12	ENST00000535410.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTATTGGACTCCACTG	122523813	True	NA	NA	False	AATAAA	-19	NA	122527245	122527680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122527352_122527455
transcript_25122.known	chr12	+	2719	8	FSM	ENSG00000139726.11	ENST00000280557.11	2719	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	476.037127689401	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	122720352	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
transcript_25134.known	chr12	+	4509	32	FSM	ENSG00000130787.14	ENST00000253083.9	4509	32	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_21	18.1551298782163	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	122833064	True	NA	4	True	AATAAA	-25	NA	122835456	122862961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860078_122860147_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_25135.known	chr12	-	2706	4	FSM	ENSG00000139722.7	ENST00000267202.7	2706	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	21.6999743983464	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGTCACTTATTTAC	-122892958	True	NA	-1	True	AATAAA	-18	NA	122896124	122865329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122867608_122868479_122868563_122870889_122871062_122895951
transcript_25140.known	chr12	+	2308	8	FSM	ENSG00000111325.16	ENST00000397389.6	2308	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	69.2923413620046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTGTGTTTGCGGCTG	NA	False	NA	7	True	TATAAA	-14	NA	122974579	122980042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976252_122976402_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25141.known	chr12	+	1949	8	FSM	ENSG00000111325.16	ENST00000538755.5	1949	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	68.9486647249019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	122974691	False	NA	NA	False	NA	NA	NA	122974702	122979762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122977980_122978092_122978359_122978570_122978752_122979011_122979082
transcript_25147.known	chr12	+	1465	7	FSM	ENSG00000111325.16	ENST00000545612.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	57.6155843114999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	122974232	True	NA	8	True	AATAAA	-20	NA	122974751	122979438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_25149.known	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	46.0241482509152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	122974451	False	NA	NA	False	NA	NA	NA	122974970	122979762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25157.known	chr12	+	1780	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	30.1298117411237	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	122973465	True	NA	6	True	TATAAA	-13	NA	122975219	122980041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25163.known	chr12	+	2274	6	FSM	ENSG00000111325.16	ENST00000406539.6	2274	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	49.829308644612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCGAGGGAGTCAGGG	122974222	True	NA	103	True	NA	NA	NA	122974741	122979533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25166.known	chr12	+	1956	6	FSM	ENSG00000111325.16	ENST00000536150.5	1956	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	61.2385499501744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTTGCGGCTGT	122974207	True	NA	8	True	TATAAA	-15	NA	122974726	122980043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25176.known	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	680.954212851349	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	122979132	True	NA	-97	True	NA	NA	NA	122980262	122982795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25181.nic	chr12	+	1258	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	675.953667051226	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980044	False	NA	17	True	ATTAAA	-17	NA	122980061	122982909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25187.nic	chr12	+	995	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	639.087912575414	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980609	False	NA	17	True	ATTAAA	-17	NA	122980675	122982909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_2519.known	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	13448	junction_1	0	930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-32269764	True	NA	-10	True	AATAAA	-14	NA	32336233	32333838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32335098_32335946
transcript_25191.known	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	489.940241253972	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	122980042	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25194.known	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	586.542888457443	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122968646	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25198.nic	chr12	+	860	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	242	junction_3	593.552895705176	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980609	False	NA	17	True	ATTAAA	-17	NA	122980675	122982909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980746_122981128_122981300_122981594_122981810_122982030_122982075_122982468_122982539_122982619
transcript_25199.known	chr12	+	1491	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	481.090677523479	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980164	False	NA	17	True	ATTAAA	-17	NA	122980188	122982909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_2520.known	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_10	20.630317496345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-32390784	True	NA	NA	False	NA	NA	NA	32394441	32364632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_25203.known	chr12	+	796	6	FSM	ENSG00000182196.14	ENST00000439686.6	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	598.060398287664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCGGCCCAGCCTGGG	122968713	True	NA	NA	False	NA	NA	NA	122980747	122982706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980813_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25204.known	chr12	+	1318	6	FSM	ENSG00000182196.14	ENST00000454885.6	1318	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	777.574330852041	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980442	False	NA	17	True	ATTAAA	-17	NA	122980494	122982909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980888_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25216.known	chr12	+	1339	5	FSM	ENSG00000182196.14	ENST00000392435.7	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	506.393127915457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCCAGCCTGGGCAGGT	122980166	False	NA	NA	False	NA	NA	NA	122980190	122982711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468
transcript_25225.known	chr12	+	1684	4	FSM	ENSG00000182196.14	ENST00000539576.5	1684	4	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_1	390.048714906228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCTCTGTTCTGTGGC	122968647	True	NA	14	True	ATTAAA	-14	NA	122980681	122982906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981880_122981956_122982539_122982619
transcript_25226.known	chr12	+	1341	6	FSM	ENSG00000111325.16	ENST00000545396.5	1341	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	62.036763294034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTCAACGGTGTGC	122973484	True	NA	9	True	AATAAA	-21	NA	122975238	122979439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976964_122978324_122978570_122978752
transcript_25234.known	chr12	+	1682	4	FSM	ENSG00000130921.9	ENST00000536130.2	1682	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.2052921501374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGTCAATTTTTAT	123231243	True	NA	7	True	AATAAA	-14	NA	123233461	123257929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123233739_123233925_123253646_123253957_123256812
transcript_25235.known	chr12	-	1161	4	FSM	ENSG00000111328.7	ENST00000538446.5	1161	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1017.84620099939	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123269208	False	NA	-33	True	AATAAA	-19	NA	123269239	123261002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123269104
transcript_25236.nnic	chr12	-	1300	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	691	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	1001.34842420941	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123270419	False	NA	-33	True	AATAAA	-19	NA	123270450	123261002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123270176
transcript_25237.known	chr12	-	1281	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	969.295735171791	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123271110	False	11301	-33	True	AATAAA	-19	NA	123271141	123261002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
transcript_25238.nnic	chr12	-	1093	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	-310	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	1011.24708487425	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123271420	False	NA	-33	True	AATAAA	-19	NA	123271451	123261002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123271384
transcript_25239.known	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1005.11934062025	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	-123272303	False	31	NA	False	NA	NA	NA	123272334	123261275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
transcript_2524.known	chr1	-	1505	11	FSM	ENSG00000160058.19	ENST00000446293.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	56.8190989016897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTCTTGGGCCTCTGCT	-32390773	True	NA	NA	False	NA	NA	NA	32394430	32366476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_25242.known	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	7	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	123231217	True	NA	38	True	AATAAA	-45	NA	123233435	123257960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123253646_123253957_123256812
transcript_25243.known	chr12	+	2648	3	FSM	ENSG00000130921.9	ENST00000425637.3	2648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTAAAGTCAATTTT	123233228	False	NA	4	True	AATAAA	-11	NA	123233384	123257926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123253646_123255034_123256812
transcript_25248.nic	chr12	-	2536	18	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-24	31709	-20	-31709	5prime_fragment	FALSE	canonical	3	29	junction_15	11.0853873702631	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	-123359413	True	NA	NA	False	AAGAAA	-18	NA	123364867	123320817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_25249.nic	chr12	-	2539	18	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-20	31709	-20	-31709	5prime_fragment	FALSE	canonical	3	27	junction_15	11.4423483446423	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	-123359413	True	NA	NA	False	AAGAAA	-18	NA	123364867	123320817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_25250.nnic	chr12	-	2431	17	NIC	ENSG00000139697.14	novel	11121	32	NA	NA	-20	-31709	combination_of_known_splicesites	FALSE	canonical	2	2	junction_15	16.8438369663803	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	-123359413	True	NA	NA	False	AAGAAA	-18	NA	123364867	123320817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123350309_123350442_123364700
transcript_25256.known	chr12	+	752	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	0	5	0	multi-exon	FALSE	canonical	3	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCTCACACACATAGAA	123364740	True	NA	NA	False	TTTAAA	-41	NA	123364952	123366113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123365116_123365524
transcript_25257.known	chr12	+	1774	7	FSM	ENSG00000183955.14	ENST00000437519.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5989449652539	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAGAAAACAACT	123382846	True	NA	NA	False	AATAAA	-24	NA	123384165	123408507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123384209_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_25258.known	chr12	-	1752	4	FSM	ENSG00000150977.11	ENST00000280571.10	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	2.62466929133727	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCGCCTGCTCTGTG	-123436571	True	NA	NA	False	AGTAAA	-19	NA	123436684	123415038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123415922_123423043_123423158_123430507_123430660_123436081
transcript_25259.nnic	chr12	-	1078	3	NIC	ENSG00000150977.11	novel	1752	4	NA	NA	172	-350	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	-123436496	False	NA	-4	True	ATTAAA	-23	NA	123436512	123415388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_123415922_123423043_123423158_123436081
transcript_2526.nic	chr1	-	1937	9	ISM	ENSG00000160058.19	ENST00000444377.5	2925	12	-13	10395	0	1122	5prime_fragment	FALSE	canonical	3	159	junction_8	22.5883681349495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCAGCCTTTTTGCC	-32390784	True	NA	NA	False	ATTAAA	-19	NA	32394441	32375507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_25266.known	chr12	+	1477	2	FSM	ENSG00000184209.15	ENST00000526639.3	1477	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCATTTGTAAGGAGC	123455590	True	NA	NA	False	NA	NA	NA	123458138	123466936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123458217_123465537
transcript_25267.known	chr12	+	2544	4	FSM	ENSG00000086598.11	ENST00000262225.8	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	3498	junction_2	283.027678269576	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGTAATGTCTCGAT	123529812	True	NA	17	True	AATAAA	-20	NA	123584551	123598582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123584817_123586746_123586940_123590341_123590450_123596604
transcript_25270.known	chr12	+	2656	14	FSM	ENSG00000111364.16	ENST00000238146.9	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_11	40.6003760148152	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	123596823	True	NA	37	True	AATAAA	-21	NA	123602098	123620943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963
transcript_2528.known	chr1	+	12831	4	FSM	ENSG00000273274.2	ENST00000609129.2	12831	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.675435561221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTCTCCTTTCAGTT	32464036	True	NA	10	True	AATAAA	-20	NA	32465071	32496686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32465106_32470583_32471616_32480890_32481070_32485100
transcript_25280.nic	chr12	+	1652	13	ISM	ENSG00000111364.16	ENST00000238146.9	2656	14	-18	1261	4	-34	5prime_fragment	FALSE	canonical	3	265	junction_11	39.7627512741371	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAGAAAAAAATGAA	123596805	True	NA	NA	False	AATAAA	-28	NA	123602080	123619682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431
transcript_25286.known	chr12	+	3327	13	FSM	ENSG00000111358.14	ENST00000543341.7	3327	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	11.4624992426996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGAATTATTTCC	123630732	True	NA	19	True	AATAAA	-16	NA	123633828	123662604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_25298.known	chr12	+	790	11	FSM	ENSG00000111358.14	ENST00000536375.5	790	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	30.696742498187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGAAAGTGTCTGCC	123630748	True	NA	NA	False	AAGAAA	-2	NA	123633844	123660212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_2530.nnic	chr1	+	611	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-47	-11235	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	27.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTAGTGCTCGTTCTGT	32463989	True	NA	12	True	AATAAA	-27	NA	32465024	32485451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_25304.nnic	chr12	-	1634	10	NNC	ENSG00000111361.13	novel	2397	9	NA	NA	25	-622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	315.772577953904	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTGGTGTTGCATCA	-123624405	True	NA	-5	True	AATAAA	-35	NA	123633741	123621027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_123621512_123621707_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_25306.known	chr12	-	2397	9	FSM	ENSG00000111361.13	ENST00000424014.7	2397	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	256.635411381594	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCTCCTGCCT	-123624350	True	NA	NA	False	NA	NA	NA	123633686	123620405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_25316.known	chr12	+	2513	18	FSM	ENSG00000168778.13	ENST00000426174.6	2513	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	5.02381869948145	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	123670110	True	NA	NA	False	NA	NA	NA	123671112	123708007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673617_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_25318.known	chr12	+	567	4	FSM	ENSG00000179195.16	ENST00000541448.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	13.4742552876052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTACAAGAGGAAGATTC	123967945	True	NA	NA	False	NA	NA	NA	123973214	124011778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973353_123973885_123974021_124011380_124011442_124011545
transcript_25319.known	chr12	+	802	2	FSM	ENSG00000179195.16	ENST00000542820.5	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	123967949	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973353_123973885
transcript_25320.known	chr12	+	753	2	FSM	ENSG00000179195.16	ENST00000540009.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	123967949	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973304_123973885
transcript_25322.known	chr12	-	3329	12	FSM	ENSG00000073060.17	ENST00000339570.9	3329	12	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	40.6122564246414	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTATTTCTTG	-124859182	True	NA	NA	False	CATAAA	-19	NA	124863917	124776855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_25328.known	chr12	-	624	2	FSM	ENSG00000150991.16	ENST00000536661.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTCCACCCTGCACC	NA	False	NA	NA	False	AAAACA	-40	NA	124915031	124913586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124913766_124914586
transcript_25329.known	chr12	-	627	2	FSM	ENSG00000150991.16	ENST00000540700.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACATCCAGAAAGAGTC	-124889477	True	NA	NA	False	NA	NA	NA	124914591	124913369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124913775_124914369
transcript_25330.known	chr12	-	2193	2	FSM	ENSG00000150991.16	ENST00000339647.6	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	1693	junction_1	0	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	-124889536	True	NA	-5	True	AATAAA	-17	NA	124914650	124911645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124913775_124914586
transcript_25331.known	chr12	-	3745	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTGAAGGGGGTCA	NA	False	NA	37	True	NA	NA	NA	124915348	124911603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124911600_124915300
transcript_25332.known	chr12	+	1911	3	FSM	ENSG00000184992.13	ENST00000672415.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAAATCTGTTGTGTCC	124991936	True	NA	NA	False	NA	NA	NA	124993704	125026499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_124994004_125012533_125012637_125024990
transcript_25341.known	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	11113	junction_1	1334.10244484197	18975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	130716725	True	NA	36	True	AATATA	-21	NA	130872065	130877678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_25348.known	chr12	+	1475	6	FSM	ENSG00000132341.12	ENST00000541630.5	1475	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7085.33763768531	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATTCTTGCTGTTAAAA	130716725	True	NA	110	True	NA	NA	NA	130872065	130876733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872127_130872835_130872913_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_25354.known	chr12	+	1530	6	FSM	ENSG00000132341.12	ENST00000392369.6	1530	6	0	0	0	0	multi-exon	FALSE	canonical	3	14136	junction_4	310.582034251822	1359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAACTCATCCCTTG	130716729	True	NA	23	True	AATAAA	-21	NA	130872069	130876281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_25355.known	chr12	+	657	6	FSM	ENSG00000132341.12	ENST00000535090.5	657	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	5651.41136354451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCCACTTTGCTGTT	130716735	True	NA	NA	False	NA	NA	NA	130872075	130875784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872127_130872583_130872618_130872835_130872921_130873002_130873129_130874545_130874734_130875611
transcript_25358.known	chr12	+	3246	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	36.6293508345501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	131707422	True	NA	17	True	AATAAA	-29	NA	131711089	131799738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_25361.nnic	chr12	+	696	4	NNC	ENSG00000061936.10	novel	1576	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	87.1869001373231	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCGTGGTTTCTTCC	NA	False	NA	16	True	AATAAA	-28	NA	131796069	131799737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_131796195_131797177_131797361_131799036_131799110_131799422
transcript_25362.nnic	chr12	+	724	3	NNC	ENSG00000061936.10	novel	3246	18	NA	NA	-2	44	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	52.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCGTAACAGTCTTTAA	131707411	True	NA	NA	False	AATAAA	-16	NA	131711078	131714539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_131711448_131714070_131714241_131714354
transcript_25363.known	chr12	+	778	2	FSM	ENSG00000061936.10	ENST00000535399.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTTAACAGTATCGT	131707427	True	NA	NA	False	AAAACA	-21	NA	131711094	131714495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_131711448_131714070
transcript_25364.nic	chr12	+	1118	3	ISM	ENSG00000177192.14	ENST00000542167.2	2151	5	9895	0	-1756	0	3prime_fragment	FALSE	canonical	3	148	junction_1	50.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	131939159	False	NA	15	True	ATTAAA	-25	NA	131939170	131943859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_131939276_131941291_131941984_131943538
transcript_25365.known	chr12	+	4041	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	43.2989607265579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTCATTCTCTAAT	131917842	True	NA	5	True	AATAAA	-19	NA	131929275	131945896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_25367.nic	chr12	+	570	3	FSM	ENSG00000185684.16	ENST00000685528.1	554	3	0	-16	0	0	multi-exon	FALSE	canonical	2	12	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACTGTATTGTACGC	132082816	True	NA	19	True	AATAAA	-33	NA	132084282	132085797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132084400_132085256_132085317_132085404
transcript_25369.known	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	TRUE	canonical	3	312	junction_5	34.7269230378027	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	132135725	True	NA	7	True	AATAAA	-14	NA	132144456	132152468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_25379.known	chr12	-	1484	2	FSM	ENSG00000256576.3	ENST00000538731.3	1517	2	33	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCGGCTGGTATTTCC	-132189501	True	NA	2	True	ATTAAA	-28	NA	132189695	132186734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132187702_132189178
transcript_25380.known	chr12	+	1793	1	FSM	ENSG00000277011.1	ENST00000613430.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATGTGGCTGAGGTG	132282726	True	NA	4	True	AATAAA	-15	NA	132282813	132284606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132282800_132284600
transcript_25381.nic	chr12	-	1042	8	ISM	ENSG00000177084.18	ENST00000537064.5	8011	49	-64	52955	-35	3313	5prime_fragment	FALSE	canonical	3	101	junction_2	8.44912747578357	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCATCAGTTTCTGACA	-132680811	True	NA	-9	True	ATTAAA	-19	NA	132687411	132677217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
transcript_25382.known	chr12	+	970	5	FSM	ENSG00000176894.10	ENST00000317479.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	25.2487623459052	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	132686418	True	NA	9	True	AATAAA	-21	NA	132687586	132704985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132687793_132690262_132690377_132695883_132696047_132701249_132701370_132704618
transcript_25383.known	chr12	-	3302	3	FSM	ENSG00000176915.15	ENST00000542282.5	3302	3	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_2	34.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCGCCCTGTCTTTTC	-132732197	False	NA	NA	False	NA	NA	NA	132732210	132726805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132727444_132728031_132728164_132729678
transcript_25386.nic	chr12	-	3242	18	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	182	junction_7	53.6698867839764	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-132881474	True	NA	-6	True	AATAAA	-20	NA	132887618	132840351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_25387.known	chr12	-	11228	18	FSM	ENSG00000072609.18	ENST00000450056.7	11228	18	0	0	0	0	multi-exon	FALSE	canonical	2	140	junction_7	59.0464013183743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTACACCTTAGGATAG	-132881461	True	NA	62	True	ATTAAA	-21	NA	132887605	132832355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_25388.known	chr12	-	2648	18	FSM	ENSG00000072609.18	ENST00000432561.6	2648	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_13	78.1674185880519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGTATGGTATTT	-132881464	True	NA	-82	True	AATATA	-27	NA	132887608	132840974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_25392.known	chr12	-	2990	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_12	86.4181050989252	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-132881459	True	NA	-6	True	AATAAA	-20	NA	132887603	132840351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_25398.nic	chr12	-	1128	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	-3	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	13.1993265821489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGCTTTATTACT	-132826628	True	NA	-4	True	AATAAA	-20	NA	132828869	132812947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
transcript_254.known	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1581.10551197572	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
transcript_25400.nnic	chr12	-	1004	4	FSM	ENSG00000090615.16	ENST00000687165.1	1001	4	-7	4	0	2	multi-exon	FALSE	canonical	3	14	junction_3	13.735598518691	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAAATGCTTTAT	-132826628	True	NA	-8	True	AATAAA	-16	NA	132828869	132812951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132813420_132816659_132816813_132821995_132822312_132828802
transcript_25406.known	chr12	-	6156	5	FSM	ENSG00000196458.11	ENST00000392321.3	6156	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	8.04285397107271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATTCTCCCATGCCC	-132955483	True	NA	-12	True	AATAAA	-13	NA	132956306	132921461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132927163_132932712_132932806_132933034_132933156_132945620_132945798_132956242
transcript_25409.nnic	chr12	-	1267	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	0	2678	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.05480466765633	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	-132955483	True	NA	56	True	NA	NA	NA	132956306	132942119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
transcript_25410.nnic	chr12	-	1432	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	190	2596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.29983164553722	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	-132955249	False	NA	-26	True	AATAAA	-25	NA	132956072	132942201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132955761
transcript_25412.nnic	chr12	-	1385	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	196	2678	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	-132955243	False	NA	56	True	NA	NA	NA	132956066	132942119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_25413.nnic	chr12	-	1159	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-15	2678	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	5.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	NA	False	NA	56	True	NA	NA	NA	132956321	132942119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_25414.nnic	chr12	-	1252	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	247	2596	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	-132955192	False	823	-26	True	AATAAA	-25	NA	132956015	132942201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_25415.nnic	chr12	-	1077	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-15	2596	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	5.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	NA	False	NA	-26	True	AATAAA	-25	NA	132956321	132942201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_25419.nnic	chr12	+	3227	5	NIC	ENSG00000198393.8	novel	834	5	NA	NA	-12	440	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	14.972892172189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTGGGTTTTTTTTT	132985436	True	NA	7	True	AATAAA	-17	NA	132986405	133012567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_132986874_132987664_132987769_133007041_133007169_133007436_133007533_133010135
transcript_25420.known	chr12	+	17697	4	FSM	ENSG00000198393.8	ENST00000328654.10	17697	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.6707311029399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACTGCTCTCTCATTAT	132985397	True	NA	NA	False	ATTAAA	-16	NA	132986366	133027102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132986874_133007041_133007169_133007436_133007533_133010135
transcript_25424.nnic	chr12	+	3278	6	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	4	-4	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	79.3942063377423	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTCTTAGTGGTATTT	133037148	False	NA	12	True	AATAAA	-21	NA	133037482	133059602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_133037546_133038874_133039013_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_25427.known	chr12	+	6811	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	41.2575750620416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	133036504	True	NA	16	True	AATAAA	-18	NA	133037508	133063299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_25430.known	chr12	+	637	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	89.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	133036520	True	NA	NA	False	NA	NA	NA	133037524	133048356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133037555_133041277_133041483_133047954
transcript_25431.known	chr12	+	558	4	FSM	ENSG00000198040.11	ENST00000536123.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	88.2131257554994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCTTCAAATTGGAGCA	133036525	False	NA	NA	False	NA	NA	NA	133037529	133048775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133037555_133041099_133041483_133047954_133048082_133048752
transcript_25434.known	chr12	+	2328	6	FSM	ENSG00000196387.10	ENST00000536790.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	31.5556651015313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079568	False	NA	63	True	AATAAA	-20	NA	133081010	133107428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_25438.known	chr12	+	529	5	FSM	ENSG00000196387.10	ENST00000440984.3	529	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	52.5802957389933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTGCCTGAATTC	133079473	True	NA	NA	False	NA	NA	NA	133080915	133084206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133084114
transcript_25439.nnic	chr12	+	1028	5	NNC	ENSG00000196387.10	novel	529	5	NA	NA	-8	1380	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	52.1488254901297	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTTCCTTGGTTTTCTT	133080721	False	NA	NA	False	AATAAA	-30	NA	133080866	133085586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133085044
transcript_25440.known	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	30.6308667849932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079480	True	NA	63	True	AATAAA	-20	NA	133080922	133107428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_25445.known	chr12	+	553	4	FSM	ENSG00000196387.10	ENST00000412146.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	44.3946943776944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAGGATCATACTGAG	133079432	True	NA	NA	False	TTTAAA	-11	NA	133080874	133105641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133083102_133083230_133083465_133083562_133105509
transcript_25448.known	chr12	-	17294	2	FSM	ENSG00000214029.6	ENST00000537226.3	17294	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGACAAATATAAGC	-133129294	True	NA	-4	True	AATAAA	-17	NA	133130274	133104778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_133122025_133130226
transcript_2545.known	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	276.755457639652	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638448	True	NA	-6	True	AATAAA	-17	NA	32650525	32621829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_25454.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	23.0753596336487	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	133179279	True	NA	57	True	NA	NA	NA	133181558	133205173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_25462.known	chr12	+	13390	6	FSM	ENSG00000090612.22	ENST00000536435.7	13390	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	31.237157361066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCACCAGGGTCAGCC	133179215	True	NA	NA	False	AATAAA	-19	NA	133181494	133214832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_25465.known	chr12	+	2169	5	FSM	ENSG00000256223.6	ENST00000426665.6	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.17960354715414	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	133129690	True	NA	-16	True	NA	NA	NA	133130626	133156968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_25467.known	chr13	+	4239	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	15.0301472196312	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	19628809	True	NA	7	True	AATAAA	-14	NA	19633658	19673441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
transcript_2547.known	chr1	-	1567	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_3	168.835883495054	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-32638473	True	NA	-3	True	AATAAA	-19	NA	32650550	32620819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_25474.nic	chr13	+	553	3	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	-11	26916	-11	-3887	5prime_fragment	FALSE	canonical	3	123	junction_2	5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAGAAAAAATTGA	19628798	True	NA	NA	False	NA	NA	NA	19633647	19646525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19633962_19642114_19642271_19646442
transcript_25475.nic	chr13	+	1266	3	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	-408	26600	-408	-3571	5prime_fragment	FALSE	canonical	3	123	junction_2	5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATCCCAGGTGGA	NA	False	NA	89	True	AATAGA	-19	NA	19633250	19646841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19633962_19642114_19642271_19646442
transcript_25476.known	chr13	-	2435	9	FSM	ENSG00000121390.19	ENST00000338910.9	2435	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	69.8720929627845	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAAGGCAAATCTCT	-19776121	True	NA	NA	False	AATAAA	-22	NA	19782945	19702499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_25477.known	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	25.7705733149185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-19862204	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_25487.known	chr13	-	1382	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5530485744167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_25492.nnic	chr13	-	1362	5	NIC	ENSG00000132950.19	novel	3200	6	NA	NA	-33	-1617	intron_retention	FALSE	canonical	2	15	junction_2	34.8882143423822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGACTTCACAGCTAC	-19862112	True	NA	NA	False	AATACA	-36	NA	19863557	19825098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_19825236_19835476_19835690_19851354_19852191_19862398_19862467_19863449
transcript_25498.nnic	chr13	-	1284	5	NIC	ENSG00000132950.19	novel	1382	6	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	38.5064929589803	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862075	True	NA	-13	True	AATAAA	-17	NA	19863520	19837464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_19837822_19838699_19838986_19851688_19852191_19862398_19862467_19863449
transcript_25499.known	chr13	-	1092	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	30.6349473640808	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTCTATGGAATTG	-19862063	True	NA	-1	True	AATAAA	-29	NA	19863508	19837452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_255.known	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	5708	junction_1	1622	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_56098_78841_78964_114680
transcript_25503.nnic	chr13	-	1151	4	NIC	ENSG00000132950.19	novel	1382	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	38.9044413345772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862202	True	NA	-13	True	AATAAA	-17	NA	19863647	19837464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_19837822_19851354_19851449_19851688_19852191_19863449
transcript_25504.known	chr13	-	1336	4	FSM	ENSG00000132950.19	ENST00000495534.1	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	33.5095342982992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19837822_19851354_19852191_19862398_19862467_19863449
transcript_25505.nic	chr13	-	1226	3	ISM	ENSG00000132950.19	ENST00000467542.5	1622	5	-166	13809	-41	-13809	5prime_fragment	FALSE	canonical	3	98	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACATTCTGTGGCTTTGC	-19863637	False	NA	NA	False	AGTAAA	-45	NA	19863690	19851273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_19852191_19862398_19862467_19863449
transcript_2551.known	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	320.050733825471	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-32638473	True	NA	-17	True	AATAAA	-6	NA	32650550	32621840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
transcript_25516.known	chr13	+	1912	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	41.9299707724629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	19950990	True	NA	NA	False	TATAAA	-42	NA	19958676	20019963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_25518.nic	chr13	+	2155	7	ISM	ENSG00000121741.17	ENST00000610343.5	7429	25	-32	69152	-13	0	5prime_fragment	FALSE	canonical	3	265	junction_1	24.8556946303167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	19951008	True	NA	NA	False	TATAAA	-42	NA	19958694	20019963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_25520.nic	chr13	+	808	3	ISM	ENSG00000121741.17	ENST00000382871.3	5051	26	-88	116130	-13	-32476	5prime_fragment	FALSE	canonical	3	94	junction_2	85.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGCATCCTCTCAG	19951008	True	NA	NA	False	NA	NA	NA	19958694	19970616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19958842_19959957_19960027_19970024
transcript_25521.known	chr13	-	1483	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	5.69281681290608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTCTCTTTTGGTTT	-20525728	True	NA	-1	True	AATAAA	-21	NA	20525857	20403668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
transcript_25522.known	chr13	-	1331	7	FSM	ENSG00000165475.15	ENST00000644593.1	1331	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.1469484893415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-20525736	True	NA	1	True	AATAAA	-23	NA	20525865	20403666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20489369_20489497_20512442_20512551_20525753
transcript_25526.known	chr13	+	2850	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_25	12.3783035994437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTATGTAGTCA	20566336	True	NA	94	True	AATAAA	-21	NA	20567156	20691444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_25527.nic	chr13	+	2195	18	ISM	ENSG00000032742.18	ENST00000351808.10	2850	26	-19	49658	0	-1110	5prime_fragment	TRUE	canonical	3	34	junction_6	9.84024643121246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGATTGAATTTGGATA	20566317	True	NA	8	True	AATAAA	-21	NA	20567137	20641786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289
transcript_25529.known	chr13	+	575	4	FSM	ENSG00000032742.18	ENST00000389373.3	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	19.9387952383176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTAAGTGAAAAAAATTT	20566345	True	NA	NA	False	NA	NA	NA	20567165	20583016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_20567257_20567669_20567998_20574379_20574476_20582956
transcript_25531.known	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.6833214455479	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-20773446	True	NA	NA	False	NA	NA	NA	20773961	20728730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
transcript_25532.nnic	chr13	-	781	4	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	31.8433666561813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	-20773456	True	NA	-16	True	AATAAA	-15	NA	20773971	20728930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_20729217_20731840_20732122_20757454_20757618_20773920
transcript_25533.nnic	chr13	-	500	3	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	24	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	-20773456	True	NA	-16	True	AATAAA	-15	NA	20773971	20728930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_20729217_20757454_20757618_20773920
transcript_25534.known	chr13	-	9921	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	0	-63	0	multi-exon	TRUE	non_canonical	0	0	junction_3	35.1825522591962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAAAACAGATTTCAT	-20902033	False	NA	0	True	AATAAA	-22	NA	20902810	20777328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
transcript_25537.nic	chr13	-	1436	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	274	6155	-27	-6155	5prime_fragment	FALSE	canonical	3	22	junction_2	60.4777277644883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGAGAAAT	-20901997	False	NA	NA	False	NA	NA	NA	20902774	20861788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_25539.nic	chr13	-	739	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	274	6852	-27	5927	5prime_fragment	FALSE	canonical	3	22	junction_2	60.4777277644883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-20901997	False	NA	NA	False	AAAAAG	-9	NA	20902774	20862485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_25540.nnic	chr13	-	755	4	NNC	ENSG00000132953.18	novel	914	5	NA	NA	-27	5927	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	63.8035178410163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-20901997	False	NA	NA	False	AAAAAG	-9	NA	20902774	20862485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_20862859_20862968_20863140_20868595_20868702_20902669
transcript_25541.nic	chr13	-	1281	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	-28	84460	-27	-6155	5prime_fragment	FALSE	canonical	3	126	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGAGAAAT	-20901997	False	NA	NA	False	NA	NA	NA	20902774	20861788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_25543.nic	chr13	-	583	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	-28	85158	-27	5926	5prime_fragment	FALSE	canonical	3	126	junction_1	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAAAGCTCTAGATGT	-20901997	False	NA	NA	False	AAAAAG	-8	NA	20902774	20862486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_25550.known	chr13	+	2234	4	FSM	ENSG00000150459.12	ENST00000607003.5	2234	4	0	0	0	0	multi-exon	FALSE	canonical	3	3072	junction_1	119.349160961534	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTGCTCAGTGCTTTA	21123018	True	NA	8	True	AATAAA	-19	NA	21140577	21149082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_21140682_21140885_21140996_21146804_21146928_21147185
transcript_25554.known	chr13	+	670	3	FSM	ENSG00000150459.12	ENST00000467636.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1575	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTGTGAAAGTTAATG	21140868	False	NA	18	True	AATATA	-14	NA	21140885	21147603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_21140996_21146804_21146928_21147166
transcript_25558.known	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_5	81.0169735302424	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165577	True	NA	-2	True	AATAAA	-19	NA	21176552	21153594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25567.known	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	158.035903954688	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165573	True	NA	-2	True	AATAAA	-19	NA	21176548	21153594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
transcript_25570.known	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	187.57996934097	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165572	True	NA	-2	True	AATAAA	-19	NA	21176547	21153594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25589.nic	chr13	-	959	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-31	14283	-31	344	5prime_fragment	FALSE	canonical	3	552	junction_3	39.3022476032436	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAGATATTTATTTAT	-21165608	True	NA	1	True	AATAAA	-28	NA	21176583	21167877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25591.nic	chr13	-	729	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-39	14521	-39	106	5prime_fragment	FALSE	canonical	3	552	junction_3	39.3022476032436	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCACTAAAAATGGATGA	-21165616	True	NA	-13	True	AGTAAA	-20	NA	21176591	21168115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25592.known	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	209.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	-21165576	True	NA	NA	False	NA	NA	NA	21176551	21154696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21155692_21155812_21176374
transcript_25599.known	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1757	junction_1	0	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	21154216	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_21176718_21176911
transcript_2560.known	chr1	-	766	6	FSM	ENSG00000176261.16	ENST00000373506.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	313.148527060243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGTGTGCCTCATGCC	-32638477	True	NA	NA	False	NA	NA	NA	32650554	32621603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650428
transcript_25603.nnic	chr13	+	1476	3	NIC	ENSG00000233325.4	novel	1310	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGATTTTATTTC	21297790	True	NA	NA	False	AATAAA	-15	NA	21298138	21305518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_21298363_21301418_21301619_21304466
transcript_25605.known	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_5	22.3092464986795	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-21596643	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_25610.known	chr13	-	2381	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	34.9320769494171	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	-23886150	True	NA	-12	True	AATAAA	-17	NA	23889400	23730188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
transcript_25616.known	chr13	+	852	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	23888697	True	NA	8	True	AATAAA	-20	NA	23888841	23892104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
transcript_2562.known	chr1	-	548	6	FSM	ENSG00000176261.16	ENST00000465588.2	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	318.795608501748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAATAAAAGACTCCT	-32638448	True	NA	-34	True	AATGAA	-41	NA	32650525	32621857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650401
transcript_25620.nic	chr13	-	567	4	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	-1	79294	-1	-43828	5prime_fragment	FALSE	canonical	3	231	junction_1	11.7284080571728	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATTTTAATTTA	-24507367	True	NA	NA	False	ATTAAA	-15	NA	24512779	24500224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_24500383_24501632_24501835_24503644_24503778_24512705
transcript_25621.known	chr13	-	5020	16	FSM	ENSG00000151849.16	ENST00000616936.4	5020	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	51.4932573795401	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATATAAGTACAGATGT	-24917565	True	NA	NA	False	AATAAA	-9	NA	24922889	24882283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_25626.known	chr13	-	514	6	FSM	ENSG00000253771.7	ENST00000434100.5	514	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTTAGTCTAATTTTTC	-24967985	False	NA	NA	False	ATTAAA	-14	NA	24968277	24924676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24924876_24925847_24925895_24933494_24933537_24951396_24951489_24967391_24967454_24968205
transcript_25631.nic	chr13	-	779	4	FSM	ENSG00000253771.7	ENST00000687945.1	768	4	-17	6	0	-6	multi-exon	FALSE	canonical	3	9	junction_2	3.68178700572909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATATGTTCTAGATCT	-24968209	True	NA	-4	True	AGTAAA	-14	NA	24968501	24941807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24942109_24942931_24943022_24951396_24951489_24968205
transcript_25632.known	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	10.9997310349043	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-25285554	True	NA	1	True	AATAAA	-20	NA	25287488	25246221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
transcript_25635.known	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	24.8080632053371	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	25296302	True	NA	14	True	AATAAA	-29	NA	25301624	25342421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_25637.nic	chr13	+	474	2	ISM	ENSG00000139496.16	ENST00000490231.5	563	5	-80	9717	-11	-4710	5prime_fragment	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCATAGTCTGCAAGGT	25296222	True	NA	NA	False	AAAAAG	-10	NA	25301544	25303239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_25301881_25303101
transcript_25639.known	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	23.636571240347	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-26220672	True	NA	-21	True	AATAAA	-13	NA	26222314	26212774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_25641.known	chr13	+	681	6	FSM	ENSG00000122026.11	ENST00000461690.5	681	6	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_4	7880.56471072981	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGACATGAGGTAGCT	27251342	False	NA	76	True	NA	NA	NA	27251560	27256691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255350_27256183_27256335_27256435
transcript_25642.known	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	8097.27432164676	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244316	True	NA	0	True	AATAAA	-21	NA	27251582	27256568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25643.known	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	8057.76806317978	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244330	True	NA	0	True	AATAAA	-21	NA	27251596	27256568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25645.known	chr13	+	616	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	7965.98944011351	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244312	True	NA	0	True	AATAAA	-21	NA	27251578	27256568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25668.known	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	90.0387937224839	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	27414172	True	NA	5	True	ATTAAA	-17	NA	27424618	27435823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_25681.known	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	249.78090399388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	-27450121	False	NA	-47	True	NA	NA	NA	27450131	27435683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
transcript_25682.nic	chr13	-	1033	5	NIC	ENSG00000122033.15	novel	1104	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	235.548694541065	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27450611	False	NA	-6	True	AATAAA	-23	NA	27450621	27435642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450508
transcript_25683.nic	chr13	-	1071	5	NIC	ENSG00000122033.15	novel	995	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_4	230.806195757393	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27450185	False	NA	-6	True	AATAAA	-23	NA	27450195	27435642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450063
transcript_25684.nic	chr13	-	1252	5	NIC	ENSG00000122033.15	novel	995	5	NA	NA	110	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	240.292009854677	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27450444	False	NA	-6	True	AATAAA	-23	NA	27450454	27435642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450141
transcript_25687.known	chr13	-	760	4	FSM	ENSG00000122033.15	ENST00000493719.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	241.836032606117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAGACGTGTCAGAA	-27450154	False	3478	NA	False	CATAAA	-9	NA	27450164	27437144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27450063
transcript_25690.known	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_4	47.91137651957	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
transcript_25691.known	chr13	-	1104	7	FSM	ENSG00000122033.15	ENST00000381116.5	1104	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	273.628346890855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27449851_27449919_27450508
transcript_25692.known	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-27447109	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27440450_27445087_27445138_27450508
transcript_25693.known	chr13	+	1606	3	FSM	ENSG00000186184.20	ENST00000621089.2	1606	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	127.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTTTCTACATGCT	27620913	False	NA	NA	False	NA	NA	NA	27620946	27667022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27621141_27648378_27648454_27665685
transcript_25695.known	chr13	+	1723	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	135.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCAACCTGTATCTA	27607277	True	NA	NA	False	AATGAA	-10	NA	27621869	27651549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27648378_27648454_27650041
transcript_25697.known	chr13	+	2036	3	FSM	ENSG00000186184.20	ENST00000399697.7	2036	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	14.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCATTCTGTATTTAT	27621767	False	NA	13	True	AATAAA	-19	NA	27621778	27667415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27648378_27648454_27665685
transcript_25700.known	chr13	+	693	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	27607299	True	NA	19	True	AATAAA	-19	NA	27621891	27623449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27622874
transcript_25701.known	chr13	+	668	2	FSM	ENSG00000186184.20	ENST00000399696.3	668	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGACTGGTTTCTGTTCC	27607361	False	NA	22	True	AATAAA	-22	NA	27621953	27623452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27622840
transcript_25702.known	chr13	+	1943	4	FSM	ENSG00000186184.20	ENST00000637071.1	1943	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	122.567895016961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTATGCATTCTGTAT	27607300	True	NA	9	True	AATAAA	-15	NA	27621892	27667411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27646193_27646219_27648378_27648454_27665685
transcript_25703.known	chr13	-	1351	1	FSM	ENSG00000261485.1	ENST00000563843.1	1351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCTCTCAGTTAA	-28138180	False	NA	NA	False	ATTAAA	-18	NA	28138193	28136842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_28136800_28138200
transcript_25709.known	chr13	+	1428	7	FSM	ENSG00000132963.8	ENST00000460403.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4079.66185962622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTGATTAGATAAATT	28598574	True	NA	NA	False	ATTAAA	-31	NA	28659103	28678925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_28659188_28659821_28659920_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_2571.nic	chr1	-	587	6	NIC	ENSG00000176261.16	novel	598	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_4	320.350183393111	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638490	True	NA	-6	True	AATAAA	-17	NA	32650567	32621829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_25712.known	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_1	629.289249868453	5016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	28598600	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_25716.nnic	chr13	-	2320	11	NNC	ENSG00000102781.14	novel	7618	11	NA	NA	15	440	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	6.15223536610881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTACTGTTAGAGTCTG	-30306716	False	295	-8	True	ATTAAA	-14	NA	30307011	30208039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306678
transcript_25718.known	chr13	-	1634	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	6.34350061086148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	-30306731	False	NA	-28	True	GATAAA	-19	NA	30307026	30208479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
transcript_25719.known	chr13	-	7618	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	5.22398315464359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTCTTTGTGGTTCAT	-30307256	True	NA	-4	True	AATAAA	-22	NA	30307551	30202629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
transcript_2573.known	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	215.140326298907	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638483	True	NA	-6	True	AATAAA	-17	NA	32650560	32621829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_25731.known	chr13	-	821	5	FSM	ENSG00000189403.15	ENST00000326004.4	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5000.93553747696	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAAGGGAGTTGTCA	-30387006	True	NA	NA	False	NA	NA	NA	30465938	30461495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30461689_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_25732.known	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	5491.0238742424	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-30385378	False	NA	-31	True	AATAAA	-24	NA	30464310	30459849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
transcript_25733.known	chr13	-	5456	5	FSM	ENSG00000189403.15	ENST00000341423.10	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	3990.78609894091	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTTTTACTGGTTTT	-30387004	True	NA	-20	True	NA	NA	NA	30465936	30456703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_25751.known	chr13	+	4894	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17.900768139943	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	30615712	True	NA	NA	False	AATAAA	-28	NA	30617919	30660766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_25756.nnic	chr13	+	796	5	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	63.3615616916124	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863330	30883395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_30863579_30875273_30875367_30881951_30882005_30882559_30882660_30883093
transcript_25758.nnic	chr13	+	707	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.2008114810186	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863326	30883395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_30863579_30881951_30882005_30882559_30882660_30883093
transcript_25759.nnic	chr13	+	743	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	65.2805909559308	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863330	30883395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_30863579_30875273_30875367_30882559_30882660_30883093
transcript_25762.nnic	chr13	+	641	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	-29	29	-29	0	multi-exon	FALSE	canonical	3	73	junction_1	49.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863339	30883395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_30863579_30882559_30882660_30883093
transcript_25767.known	chr13	-	5244	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	0	0	0	0	multi-exon	TRUE	canonical	3	768	junction_12	92.9664894792202	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTGAGTCTACTT	-31145409	True	NA	NA	False	NA	NA	NA	31161904	31134972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_25768.known	chr13	-	3570	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_17	226.783511847036	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	NA	False	NA	-5	True	AATAAA	-27	NA	31162388	31136624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
transcript_2577.nic	chr1	-	965	6	NIC	ENSG00000176261.16	novel	620	7	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_4	313.09385174417	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32650913	False	NA	-6	True	AATAAA	-17	NA	32650973	32621829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634111_32634767_32634793_32650432
transcript_25776.known	chr13	-	3480	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	233.381854144126	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	-31145432	True	NA	-8	True	AATAAA	-24	NA	31161927	31136627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_25781.nic	chr13	-	2320	14	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-111	5304	24	-1738	5prime_fragment	FALSE	canonical	3	768	junction_8	96.9751386428135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAATGATGCTAAAAA	-31145520	True	NA	NA	False	GATAAA	-10	NA	31162015	31140276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_25792.known	chr13	+	2011	10	FSM	ENSG00000139618.17	ENST00000530893.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.94425019187532	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	32313230	True	NA	NA	False	TATAAA	-11	NA	32315504	32333291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_32315668_32316421_32316524_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_25795.known	chr13	-	5649	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	91.6333272705224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32514019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
transcript_25799.known	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	16.8237926758505	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	-32532809	True	NA	-6	True	AATAAA	-16	NA	32538782	32510291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_2580.known	chr1	+	7077	5	FSM	ENSG00000160062.15	ENST00000373510.9	7077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.54950975679639	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTAGTTATGTCAC	32538571	True	NA	12	True	AATAAA	-15	NA	32539426	32605941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600086
transcript_25800.known	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	77.6468930479514	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-32532829	True	NA	-11	True	AATAAA	-17	NA	32538802	32517620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
transcript_25805.known	chr13	-	2701	6	FSM	ENSG00000244754.9	ENST00000674465.1	2701	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	100.536560514074	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-32532852	True	NA	-7	True	ATTAAA	-10	NA	32538825	32516900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538777
transcript_25813.known	chr13	-	1566	5	FSM	ENSG00000244754.9	ENST00000674180.1	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	107.894624518555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGGAATTCATTTCAG	-32532822	True	NA	-13	True	ATTAAA	-4	NA	32538795	32516906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538617
transcript_25816.known	chr13	-	1498	5	FSM	ENSG00000244754.9	ENST00000674297.1	1498	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	110.903956196341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGGAATTCATTTCAG	-32532819	True	NA	-13	True	ATTAAA	-4	NA	32538792	32516906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538682
transcript_25822.known	chr13	-	2600	4	FSM	ENSG00000244754.9	ENST00000674327.1	2600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.946210649045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTAGTACTAATTTTT	-32532852	True	NA	-102	True	NA	NA	NA	32538825	32516995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32527407_32527533_32535768_32537028_32538617
transcript_25824.nic	chr13	-	2089	4	ISM	ENSG00000244754.9	ENST00000674196.1	2607	7	-7	9813	0	0	5prime_fragment	FALSE	canonical	3	19	junction_3	116.06415850248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-32532853	True	NA	NA	False	AAAAAG	-30	NA	32538826	32526818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_32527533_32535768_32537028_32538617_32538685_32538777
transcript_25826.known	chr13	-	2454	3	FSM	ENSG00000244754.9	ENST00000674377.1	2454	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGATGTGTTTCTTCA	-32532842	True	NA	-48	True	NA	NA	NA	32538815	32516941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32535768_32537028_32538682
transcript_25827.known	chr13	-	2181	3	FSM	ENSG00000244754.9	ENST00000674433.1	2181	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	19	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-32532852	True	NA	NA	False	AAAAAG	-30	NA	32538825	32526818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32527533_32535768_32537028_32538617
transcript_25828.known	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	103.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	-32532842	True	NA	NA	False	NA	NA	NA	32538815	32526869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32527533_32535768_32537028_32538682
transcript_25829.known	chr13	-	1919	3	FSM	ENSG00000244754.9	ENST00000512755.2	1919	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTTATCATTAATA	-32532853	True	NA	NA	False	AATACA	-22	NA	32538826	32526921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32527533_32535768_32537028_32538777
transcript_25830.known	chr13	-	3626	2	FSM	ENSG00000244754.9	ENST00000674276.1	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32533544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32537028_32538682
transcript_25832.known	chr13	-	2999	5	FSM	ENSG00000139597.18	ENST00000380130.7	2999	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2.58602010819715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-32428088	False	NA	NA	False	AATAAA	-22	NA	32428130	32400722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
transcript_25835.known	chr13	-	1145	2	FSM	ENSG00000139597.18	ENST00000464470.1	1145	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTTGTCTCCCAAA	-32427972	False	NA	-1	True	AATAAA	-18	NA	32428014	32424921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32425956_32427903
transcript_25836.known	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	TRUE	canonical	2	117	junction_3	23.6819504071456	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	32580108	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
transcript_25843.known	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_8	34.069552022297	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	33810592	True	NA	14	True	AATAAA	-18	NA	33818148	33837500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
transcript_25844.known	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	151.01567592472	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	33810512	True	NA	16	True	AATAAA	-27	NA	33818068	33966558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
transcript_25850.known	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.506611674983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	-35854704	True	NA	-4	True	AATAAA	-14	NA	35855642	35771338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_25854.known	chr13	-	5247	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	-35855761	False	NA	0	True	AATAAA	-15	NA	35855784	35845899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_35850777_35854498_35854594_35855509
transcript_25855.nnic	chr13	-	2671	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-36	577	combination_of_known_splicesites	FALSE	canonical	3	60	junction_5	76.9665439583257	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-36293950	True	NA	-12	True	AATAAA	-21	NA	36297878	36168216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_25856.nnic	chr13	-	2630	15	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-36	577	combination_of_known_splicesites	FALSE	canonical	3	60	junction_5	71.2341998234682	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-36293950	True	NA	-12	True	AATAAA	-21	NA	36297878	36168216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_25862.known	chr13	-	837	8	FSM	ENSG00000242715.8	ENST00000503173.5	837	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	60.5774929578736	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_25863.known	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	63.5259869691779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	-36293886	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_25869.known	chr13	-	753	7	FSM	ENSG00000242715.8	ENST00000491049.6	753	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	88.3240561166033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_25871.known	chr13	-	624	7	FSM	ENSG00000242715.8	ENST00000379862.6	624	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	90.2016260016045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCCATTTATAAT	-36293823	True	NA	-95	True	NA	NA	NA	36297751	36231161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_25873.known	chr13	-	716	6	FSM	ENSG00000242715.8	ENST00000239860.10	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	86.4097216752837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_25878.known	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	66.3720573735665	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293904	True	NA	-2	True	AATAAA	-17	NA	36297832	36280056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_25882.nic	chr13	-	1598	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	86.7422747120585	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293950	True	NA	-2	True	AATAAA	-17	NA	36297878	36280056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36281261_36283468_36283510_36283591_36283703_36297636
transcript_25883.nnic	chr13	-	1642	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	77.2801541291309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293955	True	NA	-2	True	AATAAA	-17	NA	36297883	36280056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36281261_36283591_36283703_36295777_36295858_36297636
transcript_25884.nic	chr13	-	1913	4	NIC	ENSG00000242715.8	novel	887	3	NA	NA	-43	896	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	52.1557496564111	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTCTCTTTTATTGT	-36293955	True	NA	NA	False	ATTAAA	-22	NA	36297883	36281931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36283407_36283591_36283703_36295777_36295858_36297636
transcript_25885.nic	chr13	-	2016	4	ISM	ENSG00000242715.8	ENST00000477250.1	1632	5	-51	1875	-43	896	5prime_fragment	FALSE	canonical	3	175	junction_2	38.3869190682914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTCTCTTTTATTGT	-36293955	True	NA	NA	False	ATTAAA	-22	NA	36297883	36281931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_36283510_36283591_36283703_36295777_36295858_36297636
transcript_25887.nnic	chr13	-	1557	3	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	119.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293950	True	NA	-2	True	AATAAA	-17	NA	36297878	36280056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36281261_36283591_36283703_36297636
transcript_25888.known	chr13	-	887	3	FSM	ENSG00000242715.8	ENST00000485600.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	38	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAGGGCATATCTAAG	-36293909	True	NA	NA	False	AGTAAA	-2	NA	36297837	36282827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36283407_36283591_36283699_36297636
transcript_25892.nnic	chr13	-	3072	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	36346815	36303601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_25893.nnic	chr13	-	2955	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-18	-117	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGAGACTGTATT	NA	False	NA	-10	True	AATAAA	-21	NA	36346815	36303718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_25896.known	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	307.883805192803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-36335708	False	10686	1	True	TATAAA	-21	NA	36346394	36301637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_25897.known	chr13	-	4944	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_8	78.4624711247358	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTTTTCTTGACCT	NA	False	NA	-1	True	TATAAA	-19	NA	36346797	36301639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_25913.nic	chr13	-	1578	5	ISM	ENSG00000133104.14	ENST00000451493.5	4944	9	7	24856	7	-573	5prime_fragment	FALSE	canonical	3	785	junction_4	97.6037909099846	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAGAAAGATAATATTT	-36336104	True	NA	NA	False	AATAAA	-20	NA	36346790	36326495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_25915.known	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.49826355386165	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432126	False	NA	NA	False	AATAAA	-16	NA	36432522	36442870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_25916.known	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.91607978309962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432098	True	NA	NA	False	AATAAA	-16	NA	36432494	36442870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_25918.known	chr13	+	3099	2	FSM	ENSG00000180440.4	ENST00000315190.4	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCTTTGATTCTTT	36673840	True	NA	11	True	AATAAA	-20	NA	36674019	36697839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36674185_36694905
transcript_25919.known	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	36817166	True	NA	21	True	ATTAAA	-21	NA	36819221	36829104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36819958_36825427_36825536_36827642
transcript_25922.known	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	108.254987875848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	-37053954	True	NA	0	True	AATACA	-25	NA	37059688	37009311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_25931.known	chr13	-	2681	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_24	121.178128756343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGGTTTGCCTAAG	-37053916	True	NA	-44	True	AATAAA	-23	NA	37059650	37009493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
transcript_25932.known	chr13	-	2843	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_20	92.4143372113993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	-37053979	True	NA	-4	True	AATACA	-21	NA	37059713	37009315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_25933.known	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	94.7504031067356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	-37053915	True	NA	-43	True	AATAAA	-24	NA	37059649	37009492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_25967.known	chr13	+	1166	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	590.984949046928	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	36986997	True	NA	11	True	ATTAAA	-24	NA	37000785	37009614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_25978.known	chr13	-	1064	11	FSM	ENSG00000120697.10	ENST00000681581.1	1064	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	168.995266205891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGTAAAGACCTACTT	-36995724	True	NA	NA	False	TTTAAA	-40	NA	36999336	36950024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36967671_36967808_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_2599.known	chr1	-	817	4	FSM	ENSG00000176261.16	ENST00000492007.6	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	342.639103949849	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTACCTCAGCCTCCCG	-32638472	True	NA	NA	False	NA	NA	NA	32650549	32621310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32634767_32634793_32650432
transcript_25995.known	chr13	-	1219	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_7	29.1653438853482	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995728	True	NA	9	True	TATAAA	-33	NA	36999340	36949737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_25996.known	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	135.540982823246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	-37000721	False	20	-12	True	AATAAA	-15	NA	37000741	36949838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
transcript_25998.known	chr13	-	3669	23	FSM	ENSG00000102710.21	ENST00000495071.6	3669	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	154.627498276149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	-37053952	True	NA	-4	True	AATACA	-21	NA	37059686	37009315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37023045_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37051487_37051584_37059558
transcript_25999.known	chr13	+	694	9	FSM	ENSG00000120699.14	ENST00000239893.9	694	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	816.347965024719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGTTCCCGCCACTTC	36986994	True	NA	NA	False	NA	NA	NA	37000782	37008833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_37000823_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008061_37008178_37008728
transcript_26.known	ERCC-00067	+	628	1	FSM	ERCC-00067A	DQ883653	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00067_+_0_600
transcript_26003.known	chr13	-	1417	9	FSM	ENSG00000120697.10	ENST00000681553.1	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_7	30.9311230801599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTTCATTTGAAA	-36995700	True	NA	-74	True	NA	NA	NA	36999312	36949900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995597_36999234
transcript_26004.known	chr13	-	1064	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	139.983871838866	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-36995730	True	NA	-21	True	AATAAA	-6	NA	36999342	36949847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_26007.known	chr13	-	901	9	FSM	ENSG00000120697.10	ENST00000679837.1	901	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	143.743206361205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGCAGTCTTCAGTT	-36995728	True	NA	-115	True	AATGAA	-5	NA	36999340	36949941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26008.known	chr13	-	1044	9	FSM	ENSG00000120697.10	ENST00000680671.1	1044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	144.89284833973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTCATTGTCTGCCT	-36995728	True	NA	-26	True	AATAAA	-1	NA	36999340	36949852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26009.known	chr13	-	919	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	142.287506039708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGCCTTTTGATA	-36995688	True	NA	-19	True	AATAAA	-8	NA	36999300	36949845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26011.known	chr13	-	734	9	FSM	ENSG00000102710.21	ENST00000497318.1	734	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	139.186700154864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTTGTTTTTTA	-37053895	True	NA	NA	False	NA	NA	NA	37059629	37040404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_26013.known	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	152.634417174248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995688	True	NA	9	True	TATAAA	-33	NA	36999300	36949737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
transcript_26017.known	chr13	-	1110	10	FSM	ENSG00000120697.10	ENST00000680795.1	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	178.828906437907	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTCTGCCTTTTG	-36995712	True	NA	-22	True	AATAAA	-5	NA	36999324	36949848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995617_36999234
transcript_26018.known	chr13	+	2423	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	777.533628346631	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	36986998	True	NA	26	True	AATAAA	-24	NA	37000786	37009401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_26019.known	chr13	-	1384	11	FSM	ENSG00000120697.10	ENST00000681016.1	1384	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	172.343871373484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTGATAATTTT	-37000232	False	NA	-14	True	AATAAA	-13	NA	37000252	36949840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999591_36999645_36999931
transcript_26020.known	chr13	-	7979	11	FSM	ENSG00000133107.15	ENST00000379705.8	7979	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.79743547584717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAATCTCCTAATGGAC	-37869293	True	NA	NA	False	ATTAAA	-20	NA	37869772	37632062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26021.known	chr13	-	2912	10	FSM	ENSG00000133107.15	ENST00000338947.9	2912	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	9.25095924288829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACCCACAGAAACATTT	-37869323	True	NA	0	True	AATAAA	-31	NA	37869802	37636640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37782955_37783361_37869594
transcript_26023.nnic	chr13	-	2252	5	NNC	ENSG00000133107.15	novel	2784	11	NA	NA	-605	-10694	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	12.369316876853	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTATTCATCAGCTCAT	-37870198	True	NA	NA	False	AATAAA	-23	NA	37870407	37674121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_37674368_37692066_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26024.nic	chr13	-	2125	4	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-605	55083	-605	-28520	5prime_fragment	FALSE	canonical	3	29	junction_1	2.82842712474619	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGTTGCTCAGAAAATAT	-37870198	True	NA	NA	False	AATAAA	-21	NA	37870407	37691947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26025.nic	chr13	-	911	2	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-22	145815	-22	-119252	5prime_fragment	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAACATTTCTATGTAA	-37869345	True	NA	NA	False	AATAAA	-26	NA	37869824	37782679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_37783361_37869594
transcript_26030.nnic	chr13	+	406	6	NNC	ENSG00000120686.12	novel	3168	6	NA	NA	-34	370	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	383.855493643116	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGAGGCACTTTATTGTA	38340565	True	NA	10	True	ATTAAA	-16	NA	38349814	38360151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360040
transcript_26033.known	chr13	+	3168	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_5	81.2034482026472	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAATTCTGATTTAT	38340601	True	NA	NA	False	ATTAAA	-22	NA	38349850	38363619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_26036.known	chr13	+	846	6	FSM	ENSG00000120686.12	ENST00000379649.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	383.40547726917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCATCTGAGATAAAAA	38340601	True	NA	NA	False	ATTAAA	-17	NA	38349850	38361125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_38349922_38349998_38350228_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_26037.nic	chr13	+	1791	5	ISM	ENSG00000120686.12	ENST00000239878.9	3168	6	-21	2775	-19	-281	intron_retention	FALSE	canonical	3	971	junction_1	38.5964700458475	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATCAGGCATTTAACA	38340580	True	NA	25	True	AATAAA	-27	NA	38349829	38360844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300
transcript_2604.known	chr1	-	538	2	FSM	ENSG00000176261.16	ENST00000466361.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGTGAGGCTGAGGCA	-32638458	True	NA	NA	False	AATACA	-41	NA	32650535	32634357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32634793_32650432
transcript_26042.known	chr13	+	777	3	FSM	ENSG00000120686.12	ENST00000494372.1	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_1	52	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGAGACTTAGGGTTC	38340599	True	NA	NA	False	AAAAAG	-35	NA	38349848	38354885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_38349922_38349998_38350056_38354238
transcript_26044.known	chr13	+	3411	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	28.008431270284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036955	True	NA	35	True	ATTAAA	-23	NA	39038455	39050109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_26046.known	chr13	+	3298	7	FSM	ENSG00000188811.14	ENST00000470258.5	3298	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	38.9429782573901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036810	True	NA	35	True	ATTAAA	-23	NA	39038310	39050109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39038466_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_26047.known	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.6680208118446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036890	True	NA	35	True	ATTAAA	-23	NA	39038390	39050109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
transcript_26049.nic	chr13	+	1044	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-153	5899	-3	-254	5prime_fragment	FALSE	canonical	3	66	junction_3	29.2446576317795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCTGAATATGTTT	NA	False	NA	3	True	AATACA	-19	NA	39038302	39044210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_26050.nic	chr13	+	2115	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-153	4828	-3	817	5prime_fragment	FALSE	canonical	3	66	junction_3	29.2446576317795	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAGCTTGGGTGAC	NA	False	NA	7	True	ATTAAA	-14	NA	39038302	39045281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_26053.nic	chr13	+	1835	5	ISM	ENSG00000188811.14	ENST00000470258.5	3298	7	14	4828	14	817	5prime_fragment	FALSE	canonical	2	7	junction_1	47.6044903344212	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAGCTTGGGTGAC	39036824	True	NA	7	True	ATTAAA	-14	NA	39038324	39045281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038466_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_26055.nic	chr13	+	1047	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-88	10073	-3	-1781	5prime_fragment	FALSE	canonical	3	112	junction_1	14.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCCAGGCGTGGTGGC	NA	False	NA	NA	False	AATACA	-16	NA	39038302	39040036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_2606.known	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1658	junction_9	108.727424749058	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	32623217	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_26060.nnic	chr13	-	1365	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180249	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	15.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39422855	True	NA	-2	True	AATAAA	-19	NA	39422944	39342891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_39344055_39378427_39378527_39422841
transcript_26061.nnic	chr13	-	1322	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180256	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	15.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39422848	True	NA	-2	True	AATAAA	-19	NA	39422937	39342891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_39344055_39378427_39378527_39422877
transcript_26062.known	chr13	-	2132	4	FSM	ENSG00000183722.9	ENST00000379589.4	2132	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	11.0252236056942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39602938	True	NA	-2	True	AATAAA	-19	NA	39603193	39342891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_39344055_39378427_39378527_39600831_39601391_39602882
transcript_26064.known	chr13	+	3574	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	17.6211853415003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	39653425	True	NA	13	True	AATAAA	-14	NA	39655661	39752628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_26068.known	chr13	+	5257	19	FSM	ENSG00000133103.17	ENST00000416691.5	5257	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	42.4879067761901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTTGTGGTGTCATT	NA	False	NA	NA	False	AATAAA	-43	NA	39655626	39791665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39788334
transcript_26077.known	chr13	-	1486	7	FSM	ENSG00000102738.8	ENST00000323563.8	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_3	24.592794789441	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTTTCACTCGGT	-40765179	True	NA	NA	False	AATACA	-21	NA	40771190	40729127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
transcript_2608.known	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	520.603384831025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	32623243	True	NA	26	True	AATAAA	-21	NA	32651233	32680657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
transcript_26083.nnic	chr13	+	2583	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.8377569248198	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	40789527	False	NA	9	True	ATTAAA	-15	NA	40789591	40812460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810195_40811451
transcript_26085.known	chr13	-	572	3	FSM	ENSG00000239827.8	ENST00000633814.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGACTTACAGAAAATTTG	-40921579	True	NA	NA	False	NA	NA	NA	40921740	40882576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_40882973_40908158_40908213_40921618
transcript_26088.known	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	23.7133082393478	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	41057355	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
transcript_26096.nic	chr13	+	535	5	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-23	15361	-23	-15361	5prime_fragment	FALSE	canonical	3	272	junction_4	15.4979837398289	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAGAAAAAAAGATC	41057332	True	NA	NA	False	AAGAAA	-11	NA	41061485	41068645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560
transcript_26101.known	chr13	+	613	4	FSM	ENSG00000278390.6	ENST00000620300.4	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.98887651569859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATCTTACCAGGAGA	41132644	True	NA	NA	False	ATTAAA	-35	NA	41132951	41175659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41175372
transcript_26102.known	chr13	+	605	4	FSM	ENSG00000278390.6	ENST00000616251.2	664	4	59	0	52	0	multi-exon	FALSE	canonical	2	2	junction_3	5.35412613473634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAACCATTGCTATTT	41132703	True	NA	NA	False	AATAAA	-42	NA	41133010	41187568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41187230
transcript_26103.known	chr13	-	4736	1	FSM	ENSG00000120696.9	ENST00000379483.4	4736	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCTGACTTTCTAATT	-41191607	True	NA	-16	True	AATAAA	-18	NA	41194569	41189833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41189800_41194600
transcript_26111.nic	chr13	-	1840	12	NIC	ENSG00000120662.16	novel	1948	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	27.482225660829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGAAGTCACATTTCCTG	-41263534	False	NA	-12	True	CATAAA	-17	NA	41263586	41216974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41261690_41261826_41262214_41262332_41263484
transcript_26125.known	chr13	-	2184	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	25.5623179458638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTTTGACTTCTATT	-41262100	True	NA	-17	True	TATAAA	-25	NA	41263576	41216368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_2613.known	chr1	+	501	3	FSM	ENSG00000162521.19	ENST00000525506.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	118.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAGCCTGAGTTTGCA	32623227	True	NA	NA	False	AGTAAA	-31	NA	32651217	32657674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426
transcript_2614.known	chr1	+	690	2	FSM	ENSG00000162521.19	ENST00000465780.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACAATGAGTCTAGT	32623235	True	NA	NA	False	AAAAAG	-6	NA	32651225	32652506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913
transcript_26144.known	chr13	-	820	6	FSM	ENSG00000120662.16	ENST00000452359.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.295030175465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACCAGCAGATTATGG	-41262071	True	NA	NA	False	TATAAA	-25	NA	41263547	41252663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262410_41262482_41263484
transcript_26147.known	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	10.7654417857376	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	41308639	True	NA	14	True	AATAAA	-18	NA	41311266	41377030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
transcript_26151.known	chr13	+	1751	11	FSM	ENSG00000172766.19	ENST00000403412.7	1751	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	8.0876448982383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTGTCTGTGTAA	41308652	True	NA	8	True	AATAAA	-22	NA	41311279	41358718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303
transcript_26154.nic	chr13	+	486	3	ISM	ENSG00000172766.19	ENST00000403412.7	1751	11	-51	39866	-38	-17835	5prime_fragment	FALSE	canonical	3	113	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCTTATGAGTTTGT	41308601	True	NA	NA	False	NA	NA	NA	41311228	41318852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_41311583_41316845_41316931_41318805
transcript_26155.known	chr13	-	7174	45	FSM	ENSG00000102763.18	ENST00000379310.8	7174	45	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_41	11.8121269454407	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTACTACCTGGTGAGT	-41959013	True	NA	-10	True	AATAAA	-26	NA	41961109	41566834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41568306_41570467_41570707_41575739_41575839_41587511_41587671_41590639_41590766_41605167_41605277_41611575_41611733_41614975_41615085_41670945_41671148_41675214_41675297_41685046_41685243_41689353_41689509_41690165_41690276_41691319_41691446_41691873_41691939_41692861_41692973_41699070_41699271_41701391_41701531_41703302_41703412_41719590_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_26157.known	chr13	+	824	4	FSM	ENSG00000283554.1	ENST00000637043.1	824	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCGAGGCGGACAGAT	42424853	True	NA	NA	False	NA	NA	NA	42424891	42485956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_42424979_42435199_42435294_42437317_42437473_42485468
transcript_26159.known	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	7.11951543294907	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	42573791	True	NA	13	True	AATAAA	-18	NA	42574151	42608013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_26160.nnic	chr13	+	2002	5	NNC	ENSG00000120659.15	novel	1520	7	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.6597829569371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	42574621	True	NA	13	True	AATAAA	-18	NA	42574669	42608013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_42574842_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_2617.known	chr1	-	2443	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_4	71.7431278164598	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGTGAGCTGGAC	-32797092	True	NA	-12	True	AATAAA	-16	NA	32817358	32775238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
transcript_26170.known	chr13	+	7459	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	61.5922072993005	476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTCAATTTTTCTGT	43016870	True	NA	NA	False	AATAAA	-22	NA	43023585	43114213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_26174.known	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.21825270205921	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	43879453	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
transcript_26176.known	chr13	-	2059	7	FSM	ENSG00000151773.13	ENST00000444614.8	2059	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	8.80814017448254	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCGTATTCTGTGACTA	-43879103	True	NA	NA	False	AATAAA	-24	NA	43879740	43836351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_43837430_43858780_43858898_43859671_43860071_43868693_43868804_43869330_43869490_43874841_43874928_43879630
transcript_26177.known	chr13	+	499	4	FSM	ENSG00000227258.7	ENST00000444663.6	706	4	203	4	125	-4	multi-exon	FALSE	canonical	3	12	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	44142293	False	NA	4	True	NA	NA	NA	44142545	44148030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44147937
transcript_26178.known	chr13	-	3135	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	163	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-44431647	True	NA	1	True	ATTAAA	-16	NA	44436845	44432142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44434884_44436043_44436096_44436503
transcript_26179.known	chr13	-	2872	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	350	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	NA	False	NA	1	True	ATTAAA	-16	NA	44437254	44432142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44434884_44436043_44436096_44437175
transcript_26180.known	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	21.5687244996826	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-44986360	True	NA	-4	True	ATTAAA	-15	NA	44989471	44939248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_26183.nic	chr13	-	545	2	ISM	ENSG00000083635.8	ENST00000379161.5	3480	10	-16	42824	-16	-42824	5prime_fragment	FALSE	canonical	3	140	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGAAAGATGTTCTT	-44986376	True	NA	18	True	AAAACA	-10	NA	44989487	44982072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_44982155_44989024
transcript_26184.nnic	chr13	+	2080	10	NNC	ENSG00000133114.18	novel	4294	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	39.3938642837927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAAGTTGTAGTATTT	44986883	True	NA	3	True	AATAAA	-13	NA	44989535	45033603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45029582_45033008
transcript_26186.nic	chr13	+	1323	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-84	4183	-2	-886	5prime_fragment	FALSE	canonical	3	35	junction_8	27.0647372054487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATATTCTATGTGCCTT	44986883	True	NA	NA	False	CATAAA	-22	NA	44989535	45029419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_26188.nic	chr13	+	1622	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-84	3884	-2	-587	5prime_fragment	FALSE	canonical	3	35	junction_8	27.0647372054487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTATGGGGTTTTGCCT	44986883	True	NA	NA	False	AATACA	-17	NA	44989535	45029718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_26189.nic	chr13	+	2191	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-84	3315	-2	-18	5prime_fragment	FALSE	canonical	3	35	junction_8	27.0647372054487	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAATTCTATAAGTTATA	44986883	True	NA	8	True	AATAAA	-1	NA	44989535	45030287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_26190.nic	chr13	+	1515	9	NIC	ENSG00000133114.18	novel	4294	10	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	34.6365053087057	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTAGTATTTATTTT	44986883	True	NA	8	True	AATAAA	-18	NA	44989535	45033608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45033235
transcript_26193.known	chr13	+	3410	8	FSM	ENSG00000133114.18	ENST00000361121.6	3410	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.4570290677991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	44986911	True	NA	26	True	AATAAA	-19	NA	44989563	45030305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44989743_45004310_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_26195.known	chr13	+	899	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTCATGCCTTTCTTT	44986876	True	NA	4	True	AATAAA	-21	NA	44989528	44990427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44989500_44990400
transcript_26199.known	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_3	50.6045089545449	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	45116031	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
transcript_26208.known	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	1720.98945014198	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	-45181111	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
transcript_26209.known	chr13	-	764	6	FSM	ENSG00000133112.17	ENST00000379060.8	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1587.42054919294	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGCATTTAAACTC	-45181021	True	NA	7	True	AAGAAA	-25	NA	45341122	45337197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341037
transcript_2621.known	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_11	328.569476407116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-32797114	True	NA	-82	True	AATGAA	-39	NA	32817380	32775308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
transcript_26210.known	chr13	-	3663	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.33820475420074	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGGTTATTTCAGA	-45417617	True	NA	NA	False	AATAAA	-26	NA	45418373	45393315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_26212.known	chr13	+	255	2	FSM	ENSG00000136152.15	ENST00000476702.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTCCAGTCTGTTT	45462546	False	NA	NA	False	AATAAA	-14	NA	45465063	45466624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45465211_45466516
transcript_26213.known	chr13	+	531	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCCATGGGGGTCTT	45462380	True	NA	NA	False	NA	NA	NA	45464897	45465658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45465211_45465440
transcript_26217.nic	chr13	-	2350	12	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-26	13322	-26	-13322	5prime_fragment	FALSE	canonical	3	41	junction_11	46.9221264481185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAGAGAGAGAGAG	-46046280	False	NA	2	True	AAAAAG	-12	NA	46052785	45975497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_26221.nic	chr13	-	1497	9	NIC	ENSG00000123200.17	novel	795	4	NA	NA	-26	158	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	73.6154492956472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAAATGTGTGTGTTCT	-46046280	False	NA	-5	True	TATAAA	-14	NA	46052785	46001004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_46001461_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_26227.nic	chr13	-	1041	7	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-26	47974	-26	0	5prime_fragment	FALSE	canonical	3	41	junction_6	61.4129917489415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCTTCAGAGCTTTTT	-46046280	False	NA	NA	False	AATAAA	-23	NA	46052785	46010149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_26228.known	chr13	-	8024	19	FSM	ENSG00000123200.17	ENST00000679008.1	8024	19	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_18	49.0032752747642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-46046241	True	NA	-8	True	AATAAA	-18	NA	46052746	45954464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_26231.known	chr13	-	3206	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	5.46897816984327	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
transcript_26232.known	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_9	7.61253028131584	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	46551923	True	NA	5	True	ATTAAA	-18	NA	46553167	46753040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
transcript_26235.known	chr13	-	1079	11	FSM	ENSG00000139684.15	ENST00000378697.5	1079	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.262820319459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACATTGGATTTTAT	-46792901	True	NA	-97	True	TATAAA	-44	NA	46797133	46771334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46790596_46790662_46791345_46791421_46793396_46793445_46797104
transcript_26242.known	chr13	-	1121	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.410056061932	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATTTTAAAAGTTAT	-46792929	True	NA	-18	True	AATAAA	-14	NA	46797161	46771255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_26246.nic	chr13	-	1227	10	NIC	ENSG00000139684.15	novel	3090	9	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	185.410056061932	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATGATTTACTCAACT	-46792966	True	NA	-16	True	AATAAA	-37	NA	46797198	46775382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_46775693_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_26249.known	chr13	-	2316	13	FSM	ENSG00000136143.16	ENST00000647361.1	2316	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	341.694429766324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATATATACCAAGGACT	-47991427	True	NA	-33	True	AAGAAA	-25	NA	48001278	47942728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47991502_47991679_47994799_47994897_47996842_47997024_48001179
transcript_26256.known	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	63.9061812346818	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	-47991422	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_2626.known	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	348.299885156455	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-32797091	True	NA	-56	True	NA	NA	NA	32817357	32775282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
transcript_26263.known	chr13	-	1118	6	FSM	ENSG00000136143.16	ENST00000646602.1	1118	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	309.263382895551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACTCATCTTTTCGT	-47991442	True	NA	NA	False	ATTAAA	-23	NA	48001293	47971452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47971884_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26264.known	chr13	-	1079	6	FSM	ENSG00000136143.16	ENST00000644338.1	1079	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	310.055736924831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGTCCTTCTTT	-47991428	True	NA	-73	True	AATAGA	-34	NA	48001279	47971680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47972087_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26266.known	chr13	-	1445	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_2	53.1057644914582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGCAACTTTTAAT	-47991422	True	NA	NA	False	ATTAAA	-22	NA	48001273	47987633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26268.known	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	4.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	48030987	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_48037905_48040919_48041117_48045659
transcript_26269.nic	chr13	+	771	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-9	5719	-9	-5719	5prime_fragment	FALSE	canonical	3	506	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTAGTCTGAAGTATT	48030978	True	NA	8	True	AATAAA	-17	NA	48037716	48041502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_48037905_48040919
transcript_26277.known	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_6	54.9173621604923	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	-48082294	True	NA	NA	False	NA	NA	NA	48095104	48075723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_26278.known	chr13	-	931	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_6	275.662686388032	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAGTTTTAGTTTTA	-48082321	True	NA	NA	False	ATTAAA	-35	NA	48095131	48076967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
transcript_26288.known	chr13	-	534	2	FSM	ENSG00000139679.16	ENST00000482024.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTTTGTACATT	-48412246	False	NA	NA	False	AATAAA	-16	NA	48412489	48411740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48412206_48412420
transcript_26290.known	chr13	-	3075	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	15.3750725898403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	-48532085	True	NA	NA	False	AATAAA	-24	NA	48533080	48488962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
transcript_26291.nnic	chr13	-	3102	14	NIC	ENSG00000136161.13	novel	3075	15	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	17.3287051930789	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	-48532208	True	NA	NA	False	AATAAA	-24	NA	48533203	48488962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48524658_48524758_48533027
transcript_26292.known	chr13	-	2984	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	9.34021784657551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_26299.known	chr13	+	688	6	FSM	ENSG00000102543.14	ENST00000496061.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.5177317930167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATAAGTTTGCTTACG	49247160	True	NA	NA	False	NA	NA	NA	49247940	49267525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49265878_49266004_49267489
transcript_26300.nic	chr13	+	1203	5	NIC	ENSG00000102543.14	novel	677	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	14.3592304807744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	49247130	True	NA	11	True	AATAAA	-17	NA	49247910	49267785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_49248470_49248870_49248966_49255838_49255914_49259345_49259524_49267489
transcript_26301.known	chr13	+	3386	10	FSM	ENSG00000102543.14	ENST00000251108.10	3386	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	14.8656535113996	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGCCTCAGAAGGTG	49247144	True	NA	3	True	AATAAA	-18	NA	49247924	49293485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489_49268060_49274290_49274341_49278349_49278520_49280508_49280699_49286221_49286283_49291683
transcript_26302.known	chr13	+	677	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	13.8631706330118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	49247166	True	NA	11	True	AATAAA	-17	NA	49247946	49267785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
transcript_26303.known	chr13	-	3502	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_2	2.65518360947035	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTGGTTTCATTC	-49443384	True	NA	-21	True	AATAAA	-13	NA	49444064	49308649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
transcript_26309.nic	chr13	+	3097	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-40	3146	-40	-3145	multi-exon	FALSE	canonical	3	24	junction_2	12.0167535908791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGCCTGTTTGTGAAAT	49443486	True	NA	17	True	AATAAA	-30	NA	49444233	49491857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_26316.nnic	chr13	+	2740	13	NIC	ENSG00000136169.17	novel	6203	14	NA	NA	-40	-3145	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.6021307425397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGCCTGTTTGTGAAAT	49443486	True	NA	17	True	AATAAA	-30	NA	49444233	49491857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_49444858_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_26323.known	chr13	-	4008	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	9.9173669220548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	-49583382	True	NA	NA	False	AATAAA	-21	NA	49585558	49531945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
transcript_26324.nnic	chr13	-	3922	12	NIC	ENSG00000136144.12	novel	4008	13	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_11	44.9876015977809	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	-49583376	True	NA	NA	False	AATAAA	-21	NA	49585552	49531945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49585443
transcript_26326.known	chr13	+	3552	2	FSM	ENSG00000152213.4	ENST00000282026.2	3552	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCATTTCCTTGC	49628454	True	NA	NA	False	NA	NA	NA	49628506	49633872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49628616_49630429
transcript_26329.known	chr13	-	977	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	0	0	0	multi-exon	TRUE	canonical	3	943	junction_3	48.5615302705982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCAGTGTTATATTAAT	-49672617	True	NA	-2	True	AGTAAA	-17	NA	49691486	49660673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
transcript_26330.known	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	466.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672569	True	NA	-10	True	AATAAA	-19	NA	49691438	49660722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49661209_49663056_49663196_49691253
transcript_26331.known	chr13	-	4222	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_1	23.9686481418957	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	-49792492	False	NA	-48	True	AATAAA	-27	NA	49792682	49699319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_26341.known	chr13	-	3057	5	FSM	ENSG00000123178.15	ENST00000361840.8	3057	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	16.6358047596141	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTACCTCTTTT	-49934840	True	NA	-7	True	ATTAAA	-24	NA	49936340	49912701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49931017_49931135_49936129
transcript_26347.known	chr13	-	3086	4	FSM	ENSG00000123178.15	ENST00000378195.6	3086	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	62.2735899077611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGATGTTATCTACCTC	NA	False	NA	-11	True	ATTAAA	-20	NA	49936490	49912705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49936129
transcript_26352.known	chr13	-	705	6	FSM	ENSG00000231607.14	ENST00000443587.6	1734	6	19	1010	16	209	multi-exon	FALSE	canonical	1	5	junction_4	17.895250766614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACCCTTTTAATGAAG	-50081035	True	NA	NA	False	NA	NA	NA	50081972	50044514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50070581_50070642_50075558_50075654_50081822
transcript_26355.known	chr13	-	1737	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	12	57	0	13	multi-exon	FALSE	canonical	3	34	junction_1	5.59016994374947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACTGTTTAGGTA	-50081104	True	NA	17	True	ATTAAA	-37	NA	50082041	50043491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_26363.known	chr13	-	1208	4	FSM	ENSG00000231607.14	ENST00000433070.7	1208	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	18.263503375737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCCAGAGTTTGCCTGT	-50081086	True	NA	-9	True	ATTAAA	-33	NA	50082023	50043907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50081822
transcript_26365.known	chr13	-	855	4	FSM	ENSG00000231607.14	ENST00000449579.2	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	4.08248290463863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCACATAATGGTTTG	-50081104	True	NA	NA	False	AATAAA	-15	NA	50082041	50049188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50049663_50068096_50068164_50075558_50075654_50081822
transcript_26368.known	chr13	+	2607	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	65	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	49993520	True	NA	NA	False	NA	NA	NA	49997018	50014331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49997132_49997666_49997764_50011934
transcript_26369.known	chr13	+	478	3	FSM	ENSG00000204977.10	ENST00000478111.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTTTCTTGTTTCA	49993520	True	NA	NA	False	GATAAA	-35	NA	49997018	50020481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49997132_49997666_49997764_50020213
transcript_26370.known	chr13	+	1489	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	71	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	49993560	True	NA	9	True	TATAAA	-14	NA	49997058	50013168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49997217_49997666_49997764_50011934
transcript_26374.known	chr13	+	2957	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	4.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	50080659	True	NA	15	True	AATAAA	-21	NA	50082168	50107218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50082558_50083141_50083195_50104703
transcript_26375.known	chr13	+	2888	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	50080659	True	NA	-1	True	AATAAA	-5	NA	50082168	50107202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50082558_50104703
transcript_26376.known	chr13	+	1093	1	FSM	ENSG00000232150.3	ENST00000495613.1	1093	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACGCCCTTCTGATAAA	NA	False	NA	NA	False	AGTAAA	-26	NA	50172088	50173181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50172100_50173200
transcript_26379.known	chr13	-	1121	2	FSM	ENSG00000186047.11	ENST00000504404.2	1121	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAATGAATGAGATATT	-50843449	True	NA	NA	False	ATTAAA	-22	NA	50843692	50822904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50823521_50843187
transcript_26382.known	chr13	+	1513	11	FSM	ENSG00000136104.21	ENST00000336617.8	1513	11	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_10	28.0864736127553	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTATGACTGCTTT	50909063	True	NA	7	True	AATAAA	-17	NA	50909790	50956762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_26384.known	chr13	+	1567	10	FSM	ENSG00000136104.21	ENST00000646731.1	1567	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	173.700963415169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTGTCCAGTATGTG	50909652	False	NA	3	True	ATTAAA	-17	NA	50909767	50970457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
transcript_26388.known	chr13	+	3410	10	FSM	ENSG00000136104.21	ENST00000616907.2	3410	10	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_4	28.1034245090488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTTTACATGTTTCA	50908336	True	NA	18	True	AATAAA	-15	NA	50910006	50956503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904
transcript_26395.nnic	chr13	-	2850	5	NNC	ENSG00000226792.8	novel	800	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	18.6597829569371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	-51171565	True	NA	-4	True	AATAAA	-20	NA	51172387	51082118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_51084326_51085318_51085560_51087927_51088076_51113103_51113223_51172252
transcript_26396.known	chr13	-	800	5	FSM	ENSG00000226792.8	ENST00000433280.6	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	19.2921616207205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGGTAGAGTTGAAA	-51171566	True	NA	NA	False	NA	NA	NA	51172388	51084080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51113192_51113223_51172252
transcript_26410.nnic	chr13	-	2721	4	NIC	ENSG00000226792.8	novel	3075	4	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	16.3095064303001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	-51171555	True	NA	-4	True	AATAAA	-20	NA	51172377	51082118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_51084326_51085318_51085560_51087927_51088076_51172252
transcript_26411.nnic	chr13	+	2121	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	9	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169628	True	NA	14	True	ATTAAA	-21	NA	51170032	51176077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51172259_51172419_51174545
transcript_26416.nnic	chr13	+	2035	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	38.5	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169657	False	NA	14	True	ATTAAA	-21	NA	51170061	51176077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51172316_51172419_51174545
transcript_26422.nnic	chr13	+	2374	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	0	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169057	True	NA	14	True	ATTAAA	-21	NA	51169620	51176077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51174545
transcript_26424.nnic	chr13	+	549	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169638	False	NA	14	True	ATTAAA	-21	NA	51170042	51176077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51175948
transcript_2643.known	chr1	+	3583	7	FSM	ENSG00000116497.18	ENST00000356689.7	3583	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	117.999646892127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGAAGACATTCAGT	32812585	True	NA	NA	False	AAAACA	-34	NA	32817591	32837178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32834033_32834062_32834864
transcript_26430.known	chr13	-	15428	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTCGTGTAACGGAG	-51448375	True	NA	NA	False	AATAAA	-14	NA	51453015	51436425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51451175_51451977_51452056_51452414
transcript_26431.known	chr13	+	9369	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	21.6996781786701	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTCCCTTGGTTATGCT	51579324	True	NA	NA	False	ATTAAA	-18	NA	51584461	51767709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
transcript_26436.known	chr13	-	1199	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	26.6791637383517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	-51803099	True	NA	-9	True	AATAAA	-32	NA	51804162	51767994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_26439.known	chr13	-	1119	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	26.6739573366983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-51803100	True	NA	-7	True	AATAAA	-34	NA	51804163	51767992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_26446.nnic	chr13	-	1049	8	NIC	ENSG00000102796.12	novel	1119	9	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	37.5722433371732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-51803121	True	NA	-7	True	AATAAA	-34	NA	51804184	51767992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_51768297_51769155_51769294_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_26448.known	chr13	-	1970	8	FSM	ENSG00000102796.12	ENST00000218981.5	1970	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	26.7421550579391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	-51803094	True	NA	-9	True	AATAAA	-32	NA	51804157	51767994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_26449.known	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.3625371685793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	-51803035	False	NA	-10	True	ATTAAA	-17	NA	51804098	51770783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_26451.nic	chr13	-	958	8	NIC	ENSG00000102796.12	novel	561	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.698996260533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	-51803121	True	NA	NA	False	AATAAA	-20	NA	51804184	51772765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_26452.nic	chr13	-	875	7	NIC	ENSG00000102796.12	novel	487	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	38.3869190682914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	-51803121	True	NA	NA	False	AATAAA	-20	NA	51804184	51772765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_26453.nnic	chr13	-	938	6	NNC	ENSG00000102796.12	novel	561	5	NA	NA	-21	664	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	45.5148327471386	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTATGCTTTTAGTCTC	-51803121	True	NA	NA	False	ACTAAA	-14	NA	51804184	51789358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_51789774_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_26455.nic	chr13	-	488	4	ISM	ENSG00000102796.12	ENST00000682342.1	1199	10	-22	23123	-21	-1095	5prime_fragment	FALSE	canonical	3	55	junction_1	41.4835978296108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTCTGTGGATGTGG	-51803121	True	NA	NA	False	AATAAA	-17	NA	51804184	51791117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_51791258_51797825_51797909_51799533_51799668_51804053
transcript_26457.known	chr13	+	1793	1	FSM	ENSG00000231856.3	ENST00000618844.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGTTTCATACAAAGTG	51803728	True	NA	6	True	ATTAAA	-18	NA	51803837	51805630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_51803800_51805600
transcript_26459.known	chr13	-	2128	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	38.7013637428393	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156477	True	NA	-12	True	ATTAAA	-16	NA	52159597	52132646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_2646.known	chr1	+	4220	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	46.2409150236262	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	32812646	True	NA	20	True	AATAAA	-17	NA	32817652	32858875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_26462.nnic	chr13	-	1949	15	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_14	51.9348591202165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156472	True	NA	-12	True	ATTAAA	-16	NA	52159592	52132646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_26466.known	chr13	-	2345	15	FSM	ENSG00000136098.17	ENST00000611833.4	2345	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	52.1268077061377	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	NA	False	NA	-8	True	ATTAAA	-20	NA	52159861	52132642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143915_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_26468.nic	chr13	-	1993	15	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	52.4591677947171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156477	True	NA	-12	True	ATTAAA	-16	NA	52159597	52132646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_2647.known	chr1	+	1688	7	FSM	ENSG00000116497.18	ENST00000531123.5	1688	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	120.52477845747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTATCTTATTGTCAG	32817512	False	NA	NA	False	AATAGA	-19	NA	32817574	32843187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32834033_32834062_32842782
transcript_26470.nnic	chr13	-	2079	14	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	89	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_13	57.6321737887901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	NA	False	NA	-12	True	ATTAAA	-16	NA	52159772	52132646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_26471.nic	chr13	-	1984	14	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	59.7157963302923	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156477	True	NA	-12	True	ATTAAA	-16	NA	52159597	52132646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52156074_52156249_52159542
transcript_26476.nic	chr13	-	1964	14	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	58.2335635951818	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156498	True	NA	-12	True	ATTAAA	-16	NA	52159618	52132646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_2648.nic	chr1	+	1622	7	NIC	ENSG00000116497.18	novel	4220	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	69.8651478842555	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCATTGCCGACTTGAA	32817495	True	NA	18	True	TTTAAA	-21	NA	32817557	32856185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32817690_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32853078_32853167_32855923
transcript_26482.known	chr13	+	6504	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	66.8183170994301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004717	True	NA	-29	True	NA	NA	NA	52012410	52033540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
transcript_26488.known	chr13	+	6510	4	FSM	ENSG00000253710.5	ENST00000521508.2	6510	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.9652400197707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCTGTCAGGTTTAA	52004704	True	NA	31	True	AATAAA	-27	NA	52012397	52033600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028318
transcript_26490.known	chr13	+	1004	4	FSM	ENSG00000253710.5	ENST00000650049.2	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	66.6049714527543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTAGAAAACAGACAAAA	52004719	True	NA	68	True	NA	NA	NA	52012412	52028689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52024585_52024938_52028318
transcript_26491.known	chr13	+	6556	4	FSM	ENSG00000253710.5	ENST00000680950.1	6556	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	73.1619208787376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004710	True	NA	-29	True	NA	NA	NA	52012403	52033540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012575_52018912_52019144_52024005_52024938_52028318
transcript_26493.nic	chr13	+	1196	3	ISM	ENSG00000253710.5	ENST00000649340.2	5097	4	-10	7295	-3	-3794	5prime_fragment	FALSE	canonical	3	136	junction_1	19.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGGTCTGCATACCATG	52004694	True	NA	25	True	AATAAA	-42	NA	52012387	52024895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_52012463_52018912_52019144_52024005
transcript_26494.known	chr13	+	5510	3	FSM	ENSG00000253710.5	ENST00000679544.1	5510	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	58.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGCTCCATATGCCAA	52004704	True	NA	-37	True	NA	NA	NA	52012397	52033532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52028318
transcript_26495.known	chr13	+	6219	3	FSM	ENSG00000253710.5	ENST00000681053.1	6219	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004704	True	NA	-29	True	NA	NA	NA	52012397	52033540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52024005_52024938_52028318
transcript_26496.known	chr13	+	1983	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	52004717	True	NA	9	True	ATTAAA	-14	NA	52012410	52017713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52015782
transcript_26498.known	chr13	+	1404	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGCCAGAATGATG	52004704	True	NA	NA	False	AAGAAA	-10	NA	52012397	52029657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52028318
transcript_26501.known	chr13	-	4425	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_8	20.2121880156182	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-52447173	True	NA	-2	True	AATAAA	-24	NA	52450634	52412605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_26507.nic	chr13	-	574	6	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	-35	21085	-35	1147	5prime_fragment	FALSE	canonical	3	168	junction_1	19.4278151113294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACTGACAAAAAC	-52447208	True	NA	NA	False	AAGAAA	-4	NA	52450669	52433690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_26509.known	chr13	-	557	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGTGTTTGTGTGGTT	-52455224	True	NA	-1	True	GATAAA	-18	NA	52455331	52454774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52454800_52455300
transcript_26512.known	chr13	+	3614	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	62.6039136156838	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	52448065	True	NA	21	True	AATAAA	-18	NA	52455477	52476627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_26516.known	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	196.390196738534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	52448559	False	NA	10	True	ATTAAA	-15	NA	52455971	52476349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_26518.known	chr13	+	1972	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	48.2012447972041	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	52448026	True	NA	9	True	ATTAAA	-19	NA	52455438	52465843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
transcript_26525.nnic	chr13	+	732	5	NIC	ENSG00000244471.6	novel	865	4	NA	NA	115	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	6.41774882649672	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	52570170	True	NA	NA	False	ATTAAA	-16	NA	52570267	52587095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52586809
transcript_26529.nic	chr13	+	2321	7	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	34.0930100362718	18088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615529	True	NA	-18	True	NA	NA	NA	52617502	52643773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52629218_52629360_52632421_52632495_52637304_52637447_52642405
transcript_26531.nnic	chr13	+	2377	7	NNC	ENSG00000273784.5	novel	2158	6	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	34.1504026330584	18086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615470	True	NA	-18	True	NA	NA	NA	52617443	52643773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52629768_52629907_52632421_52632495_52637304_52637447_52642405
transcript_26532.nic	chr13	+	2299	6	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-81	23	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	31.2409987036266	18265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGGTGGAATCCGTA	52615470	True	NA	5	True	AATAAA	-20	NA	52617443	52643796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642368
transcript_26533.known	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	21.1660104885167	18102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615551	True	NA	-18	True	NA	NA	NA	52617524	52643773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_26537.nnic	chr13	+	2011	4	NNC	ENSG00000273784.5	novel	2158	6	NA	NA	-9	-10519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.089285329914	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGACTCTTTTTAA	52615542	True	NA	NA	False	ATTAAA	-28	NA	52617515	52631982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52630555
transcript_26538.nnic	chr13	+	1143	4	NNC	ENSG00000273784.5	novel	2158	6	NA	NA	-14	-10519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.089285329914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGACTCTTTTTAA	52615537	True	NA	NA	False	ATTAAA	-28	NA	52617510	52631982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52631428
transcript_26539.known	chr13	-	975	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTCTTGGTCATAA	-52651973	True	NA	NA	False	AATAAA	-16	NA	52652279	52651304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52651300_52652300
transcript_26543.known	chr13	+	1217	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	146.118295271392	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	52648439	True	NA	26	True	AATAAA	-33	NA	52652838	52687872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_26545.known	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_5	52.1111925490953	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	52648436	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_26555.known	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	329.912109507972	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52730507	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_26556.nnic	chr13	-	1654	7	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	-187	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_2	347.625277178362	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52739976	False	NA	-10	True	AATAAA	-27	NA	52740007	52703263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_52703811_52708535_52708715_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_26562.nnic	chr13	-	1663	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-322	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_3	374.713437175664	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52740111	True	NA	-10	True	AATAAA	-27	NA	52740142	52703263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52703811_52708535_52708703_52712715_52712870_52733218_52733360_52739030_52739172_52739629
transcript_26567.nnic	chr13	-	1443	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-155	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	411.738072079811	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52739944	False	NA	-10	True	AATAAA	-27	NA	52739975	52703263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52703811_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_26581.nnic	chr13	-	2193	5	NNC	ENSG00000234787.8	novel	1020	3	NA	NA	-48	6879	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_1	1784.09323957578	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTATGGCATAGTTCAC	-54118143	True	NA	-18	True	AATAAA	-15	NA	54132914	54108903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_54110330_54110894_54111012_54127279_54127430_54130873_54131072_54132612
transcript_26585.nnic	chr13	-	1165	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-31	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	1684.58576139655	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118126	True	NA	-3	True	CATAAA	-23	NA	54132897	54115782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_26594.nnic	chr13	-	971	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-35	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	359.511705882669	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118130	True	NA	-3	True	CATAAA	-23	NA	54132901	54115782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54132612
transcript_26597.nic	chr13	-	1080	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-56	-5	combination_of_known_junctions	FALSE	canonical	3	1104	junction_1	1248.13220453604	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCGTGGCCTCTGC	-54132904	False	NA	-8	True	CATAAA	-18	NA	54132922	54115787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
transcript_26603.known	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	1612.78826880654	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	-54118091	True	NA	0	True	ATTAAA	-18	NA	54132862	54124323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
transcript_26605.known	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	1410.41042096106	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	-54118048	True	NA	NA	False	NA	NA	NA	54132819	54124994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
transcript_26606.nic	chr13	-	861	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-35	-5	combination_of_known_junctions	FALSE	canonical	3	587	junction_2	258.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCGTGGCCTCTGC	-54118130	True	NA	-8	True	CATAAA	-18	NA	54132901	54115787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54127279_54127430_54132612
transcript_26608.known	chr13	-	849	3	FSM	ENSG00000234787.8	ENST00000607494.5	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_2	85.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTCTAAACCTTATTC	-54118080	True	NA	NA	False	ACTAAA	-19	NA	54132851	54124812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54125273_54127279_54127430_54132612
transcript_26609.known	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	163.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	-54118095	True	NA	NA	False	AATAAA	-26	NA	54132866	54126861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54127430_54130873_54131072_54132612
transcript_26618.nnic	chr13	+	1215	5	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_3	16.6939360247965	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54268952	True	NA	10	True	AATAAA	-25	NA	54269149	54353580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54341965_54342163_54342319_54342491_54353104
transcript_26621.nnic	chr13	+	1449	5	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_3	24.5407823836161	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTTTTTTTTTTGT	54268482	True	NA	18	True	ATTAAA	-15	NA	54269288	54353965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335042_54335144_54341965_54342163_54342319_54342491_54353104
transcript_26625.nnic	chr13	+	1548	4	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_3	9.7410927974683	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267494	False	NA	10	True	AATAAA	-25	NA	54268645	54353580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54341965_54342163_54353104
transcript_26635.nnic	chr13	+	781	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGGGTGACTGTTAT	54268991	False	NA	10	True	CATAAA	-20	NA	54269051	54342277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54341965
transcript_26637.nnic	chr13	+	1511	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	20.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267334	True	NA	10	True	AATAAA	-25	NA	54268485	54353580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_26639.nnic	chr13	+	1281	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	20.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATTTTTTTTTTTGTTT	54269079	False	NA	20	True	ATTAAA	-17	NA	54269102	54353967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_26642.nnic	chr13	+	1131	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_2	14	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGGGTGACTGTTAT	54268670	False	NA	10	True	CATAAA	-20	NA	54268689	54342277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335042_54335144_54341965
transcript_26644.nnic	chr13	+	1363	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267470	False	NA	10	True	AATAAA	-25	NA	54268621	54353580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335042_54335144_54353104
transcript_26646.nnic	chr13	+	1886	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATTTTTTTTTTTGTTT	54267334	True	NA	20	True	ATTAAA	-17	NA	54268485	54353967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335042_54335144_54353104
transcript_26649.nnic	chr13	+	978	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	7	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54269079	False	NA	10	True	AATAAA	-25	NA	54269102	54353580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54341965_54342163_54353104
transcript_26652.nnic	chr13	+	1364	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267368	True	NA	10	True	AATAAA	-25	NA	54268519	54353580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54353104
transcript_26654.nnic	chr13	+	1224	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTGTTTTTTGT	54268991	False	NA	25	True	ATTAAA	-22	NA	54269051	54353972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54353104
transcript_26657.nnic	chr13	+	1287	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-87088	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTAGCCAGCGTG	55037528	True	NA	NA	False	AATACA	-15	NA	55039741	55074402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039846_55062871_55063003_55073350
transcript_26665.nnic	chr13	+	1213	4	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	30	junction_2	20.5318181259127	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCAGCTTCTTACTCT	NA	False	NA	22	True	AATAAA	-22	NA	55581089	55672522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_55581235_55657964_55658323_55670879_55670978_55671910
transcript_26668.nnic	chr13	+	982	4	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	8	junction_1	24.0970260959038	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCAGCTTCTTACTCT	55581429	True	NA	22	True	AATAAA	-22	NA	55581537	55672522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_55581594_55660856_55661073_55670879_55670978_55671910
transcript_2667.known	chr1	-	1030	6	FSM	ENSG00000121900.19	ENST00000373463.8	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	18.8637217960826	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTGCATGCAGGGG	-32900376	True	NA	-1	True	ATTAAA	-17	NA	32901389	32894594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
transcript_2668.nnic	chr1	+	1037	3	NNC	ENSG00000121905.10	novel	503	2	NA	NA	-432	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGGGTGGTGGGGGA	32892987	True	NA	20	True	AATAAA	-17	NA	32893091	32894646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_32893141_32893523_32893630_32893764
transcript_26682.known	chr13	-	809	3	FSM	ENSG00000274090.1	ENST00000617598.1	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATTATTTCAACTAATA	-55583475	False	NA	NA	False	NA	NA	NA	55583524	55535696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_55536347_55554860_55554985_55583489
transcript_26696.nnic	chr13	-	1214	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-232	-18443	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	76	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	-55583707	False	NA	2	True	ATTAAA	-22	NA	55583756	55554139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55554985_55581427_55581530_55583489
transcript_26704.nnic	chr13	-	727	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-232	-42571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-55583707	False	NA	NA	False	ATTAAA	-17	NA	55583756	55578267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55578626_55581427_55581530_55583489
transcript_26705.nnic	chr13	-	761	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-209	-42571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-55583684	False	NA	NA	False	ATTAAA	-17	NA	55583733	55578267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55578626_55581427_55581587_55583489
transcript_26706.nic	chr13	-	1093	2	ISM	ENSG00000274090.1	ENST00000617598.1	809	3	-213	18443	-213	-18443	5prime_fragment	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	-55583688	False	NA	2	True	ATTAAA	-22	NA	55583737	55554139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_55554985_55583489
transcript_26708.nnic	chr13	-	2542	2	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-232	-43558	at_least_one_novel_splicesite	FALSE	canonical	3	228	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTGTCATCCCTAC	-55583707	False	NA	NA	False	NA	NA	NA	55583756	55579254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55581530_55583489
transcript_2671.known	chr1	-	880	8	FSM	ENSG00000004455.17	ENST00000467905.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	585.48657594538	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGGTGGTCAGGG	-33016816	True	NA	NA	False	NA	NA	NA	33036886	33010754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33012073_33012123_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_26710.known	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.3484809374068	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-60159077	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_26715.known	chr13	+	3019	14	FSM	ENSG00000083544.16	ENST00000196169.7	3019	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	16.2880869087787	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTTTTATTTGCCT	60396422	True	NA	27	True	AATAAA	-23	NA	60396456	60573878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_26716.known	chr13	+	2484	14	FSM	ENSG00000083544.16	ENST00000377894.6	2484	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	15.9800171071736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTTTTATTTGCC	60396656	True	NA	26	True	AATAAA	-22	NA	60396987	60573877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_26717.nic	chr13	+	2897	14	NIC	ENSG00000083544.16	novel	2645	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	7.88827307279647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTACTGTGTGTTTT	60396638	True	NA	19	True	AATAAA	-15	NA	60396969	60573870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_26718.known	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	7.94209815331711	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	60396636	True	NA	20	True	AATAAA	-16	NA	60397219	60573871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_26725.known	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	22.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-72719985	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_72710346_72718951_72719098_72727523
transcript_26728.nic	chr13	-	392	2	ISM	ENSG00000204899.6	ENST00000377818.4	2231	3	-87	10532	-87	-10532	5prime_fragment	FALSE	canonical	3	693	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAATGATGAAGTTATG	-72720072	True	NA	-5	True	AATAAA	-21	NA	72727716	72718898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_72719098_72727523
transcript_26729.known	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	2	127	junction_16	33.1995481896968	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	-72776307	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_26735.known	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	14.2411346933934	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	72726149	True	NA	NA	False	AATAAA	-16	NA	72727922	72756196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_26742.known	chr13	+	1673	11	FSM	ENSG00000136122.18	ENST00000651376.1	1673	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	32.552112066654	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTCTGTCAGAATCAA	72726149	True	NA	NA	False	AAAACA	-31	NA	72727922	72755216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_26748.nnic	chr13	+	1879	10	NIC	ENSG00000136122.18	novel	2285	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	6	junction_2	39.7159668734296	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGTGATGTGTTTAAC	72726130	True	NA	8	True	AATAAA	-15	NA	72727903	72755449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_72728008_72728925_72729094_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_26755.known	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	TRUE	canonical	1	20	junction_8	16.5169515523088	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	72779525	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
transcript_26765.known	chr13	+	2882	16	FSM	ENSG00000083535.16	ENST00000617689.4	2882	16	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_8	17.0606760319357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGATTTTTGACA	72779532	True	NA	NA	False	AATAAA	-20	NA	72782139	72974251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590
transcript_26767.known	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1095.24883017513	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
transcript_26776.known	chr13	-	1669	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_2	49.4660377318508	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTTGAATTTAAAAAGC	-75511805	True	NA	NA	False	AATAAA	-17	NA	75537841	75525213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
transcript_26777.known	chr13	-	392	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1034.28762386915	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
transcript_26780.known	chr13	-	594	3	FSM	ENSG00000188243.14	ENST00000377619.9	594	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1113.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511582	False	NA	-21	True	AATAAA	-18	NA	75537618	75526435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75530113_75530267_75537381
transcript_26781.nnic	chr13	+	826	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_7	612.555236992834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	75540936	True	NA	6	True	ATTAAA	-17	NA	75549749	75605933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75605728
transcript_2679.known	chr1	-	3597	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	286.414278430544	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	-33016813	True	NA	-6	True	ATTAAA	-16	NA	33036883	33007985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_26791.nic	chr13	+	993	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	547.947519727026	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	NA	False	NA	6	True	ATTAAA	-17	NA	75549449	75605933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_26795.known	chr13	+	931	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	0	0	0	0	multi-exon	FALSE	canonical	3	1415	junction_1	137.923665482034	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAAACTAGCAATAG	75540977	True	NA	93	True	NA	NA	NA	75549790	75606020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_26801.known	chr13	+	696	7	FSM	ENSG00000118939.18	ENST00000471792.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	620.024103474122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTATTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	75549482	75594990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914
transcript_26806.known	chr13	+	604	4	FSM	ENSG00000102805.16	ENST00000635989.1	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	50.2195181179589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGTTCAAGTAGCAAC	76990615	True	NA	NA	False	NA	NA	NA	76992088	76996099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_76992272_76995062_76995229_76995456_76995514_76995901
transcript_26807.known	chr13	+	5243	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	16.4991582276861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAACCTTGTATCTTCA	76990607	True	NA	NA	False	AATAGA	-8	NA	76992080	77005117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
transcript_26809.known	chr13	+	2341	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	76990585	True	NA	NA	False	ATTAAA	-45	NA	76992058	76997863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_76992272_76995062_76995229_76995901
transcript_2681.known	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	616.846122536965	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	-33016832	True	NA	NA	False	NA	NA	NA	33036902	33013206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
transcript_26812.known	chr13	-	2555	8	FSM	ENSG00000136160.17	ENST00000475537.2	2555	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	460.511029361149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATCTACAATTTTTT	-77919359	False	NA	-59	True	NA	NA	NA	77919390	77897349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919065
transcript_26813.known	chr13	-	4471	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_7	418.471611696562	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGTGTGTTTCATTG	NA	False	NA	0	True	ATTAAA	-24	NA	77919768	77895480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
transcript_26814.known	chr13	-	4445	8	FSM	ENSG00000136160.17	ENST00000646605.1	4445	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	459.750464704407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGAAGTTATTCAATTA	-77919366	False	NA	-45	True	AATATA	-14	NA	77919397	77895525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919006
transcript_26817.known	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	342.568930614296	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-77913091	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_2682.known	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	530.08889820482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	-33016770	True	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_26825.known	chr13	-	1571	7	FSM	ENSG00000136160.17	ENST00000626030.1	1571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	424.509291875795	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAACTTGTTCTTTAAT	-77913059	True	NA	NA	False	TATAAA	-5	NA	77918799	77896407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77896559_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_26827.known	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	20.0259831219344	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-78655358	True	NA	-13	True	AATAAA	-20	NA	78659155	78614288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_2683.known	chr1	-	3576	6	FSM	ENSG00000004455.17	ENST00000629371.2	3576	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	544.216354035782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTAAGTATTGCTATTA	-33016841	True	NA	40	True	NA	NA	NA	33036911	33007939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_2684.known	chr1	-	5970	6	FSM	ENSG00000004455.17	ENST00000672715.1	5970	6	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_3	40.1865649191368	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	-33016813	True	NA	-6	True	ATTAAA	-16	NA	33036883	33007985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_26840.known	chr13	+	2324	8	FSM	ENSG00000102471.15	ENST00000620924.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	15.7519030272406	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTTTGTCTCATT	79481248	False	NA	77	True	AATAAA	-27	NA	79481473	79554096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
transcript_26846.known	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	-80337730	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_80337757_80340621
transcript_26847.known	chr13	+	792	5	FSM	ENSG00000183098.11	ENST00000617456.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	4.94974746830583	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTTGGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	94286347	94403217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
transcript_26853.nic	chr13	-	1994	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	45.4792660051109	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593436	True	NA	NA	False	AATAAA	-17	NA	94596273	94574053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
transcript_26854.known	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_11	20.3571418214959	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593315	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_26855.nnic	chr13	-	1827	12	NNC	ENSG00000088451.11	novel	1797	12	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	46.0154483581689	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593456	True	NA	NA	False	AATAAA	-17	NA	94596293	94574053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596161
transcript_26861.nnic	chr13	-	1732	11	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	47.8493469129935	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593341	True	NA	NA	False	AATAAA	-17	NA	94596178	94574053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94592240_94592310_94593840_94593908_94596050
transcript_26863.known	chr13	+	8884	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	16.8999815088656	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	94599707	True	NA	27	True	AATAAA	-38	NA	94601856	94634661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
transcript_26868.nnic	chr13	+	1090	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	-55	-1521	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	321.88917347435	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAAATGTTTTCTACA	95547261	True	NA	21	True	AATAAA	-17	NA	95552664	95578238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_26869.known	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	43.2695042726399	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	95547316	True	NA	9	True	AATAAA	-19	NA	95552719	95579759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_26878.known	chr13	-	2909	2	FSM	ENSG00000247400.5	ENST00000671463.2	2927	2	18	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATCTAGTAAAATATCTA	-95676635	True	NA	NA	False	TTTAAA	-44	NA	95676955	95672863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95674669_95675851
transcript_26880.known	chr13	+	5590	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	7.92944090449328	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	95673114	True	NA	21	True	AATAAA	-23	NA	95677138	95794988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
transcript_26886.nnic	chr13	-	1578	11	NNC	ENSG00000102595.21	novel	1547	10	NA	NA	-17	0	intron_retention	FALSE	canonical	3	12	junction_1	59.6071304459458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTCTTGTAATTAGT	-96048582	True	NA	NA	False	AATAAA	-17	NA	96053418	95983522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_95983865_95985238_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_26890.known	chr13	-	1547	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	34.5814479628872	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTTTTAATTGTAAT	-96048564	True	NA	NA	False	AATAAA	-16	NA	96053400	95984909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_26892.nnic	chr13	-	2154	10	NNC	ENSG00000102595.21	novel	1547	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	60.7398825594299	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGTAATTTCTCA	-96048582	True	NA	NA	False	AATAAA	-22	NA	96053418	95984903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_95985921_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_26894.known	chr13	-	1233	10	FSM	ENSG00000102595.21	ENST00000376714.7	1233	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	84.0041151255383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTTTCTTGTAATTAG	-96053372	False	NA	NA	False	AATAAA	-16	NA	96053482	95983523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95983596_95983803_95983865_95986332_95986433_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_26896.known	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	65.4800172041916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	-96048557	True	NA	NA	False	NA	NA	NA	96053393	95990144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_2690.known	chr1	-	5059	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	562.366595291719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	NA	False	NA	-15	True	AATAAA	-6	NA	33037004	33008891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_26902.known	chr13	+	3419	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_14	157.561599382591	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	97946334	True	NA	10	True	AATAAA	-19	NA	97976631	98021882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_26909.nic	chr13	+	1732	10	ISM	ENSG00000065150.21	ENST00000490680.5	3419	26	43	20635	0	325	5prime_fragment	FALSE	canonical	3	1041	junction_6	57.0635340088593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTATGTGTTTTATTT	97946377	True	NA	NA	False	AATATA	-21	NA	97976674	98001247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538
transcript_2691.known	chr1	-	811	5	FSM	ENSG00000004455.17	ENST00000480134.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	573.299823390868	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCGTGTGTGCTACT	-33016807	True	NA	-7	True	ATTAAA	-20	NA	33036877	33013043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_26910.nic	chr13	+	1877	10	ISM	ENSG00000065150.21	ENST00000490680.5	3419	26	-12	20545	-12	415	5prime_fragment	FALSE	canonical	3	1041	junction_6	57.0635340088593	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTTGTTTGTTTTTTGG	97946322	True	NA	NA	False	ATTAAA	-20	NA	97976619	98001337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538
transcript_26912.known	chr13	-	9605	11	FSM	ENSG00000102572.15	ENST00000539966.6	9605	11	0	0	0	0	multi-exon	TRUE	canonical	3	593	junction_10	75.8725246713196	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCATTCCATCTCT	-98562294	True	NA	NA	False	AATAAA	-17	NA	98577107	98445184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_98453210_98457167_98457305_98460371_98460441_98461773_98461898_98463690_98463837_98466375_98466562_98474820_98474979_98475249_98475359_98482264_98482322_98519242_98519474_98576744
transcript_26914.known	chr13	-	753	4	FSM	ENSG00000228889.8	ENST00000668596.1	753	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGCCTGAGACCAGAG	-99200195	True	NA	NA	False	AATAAA	-23	NA	99200705	99181563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_99181876_99182584_99182703_99197547_99197803_99200637
transcript_26915.known	chr13	-	1771	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	-9	3	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	-99200200	True	NA	-15	True	AATAAA	-16	NA	99200710	99196376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_99197803_99200365
transcript_26919.nic	chr13	+	2368	10	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	205.286129735373	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTATTTTTCTAT	99194602	True	NA	16	True	AATAAA	-17	NA	99200806	99386427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_99200940_99201428_99201568_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_26922.known	chr13	+	2259	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	16.8962828752362	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCACTGCTCGTCTT	99194649	True	NA	25	True	AATAAA	-40	NA	99200853	99386504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_26925.nnic	chr13	+	2063	8	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	172.557828224722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCAGTATTTTTCTATC	99194649	True	NA	17	True	AATAAA	-18	NA	99200853	99386428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99385227
transcript_2693.known	chr1	-	3040	5	FSM	ENSG00000004455.17	ENST00000673291.1	3040	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	588.823403067507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTAGCCCCTCCCAAAG	-33016793	True	NA	NA	False	NA	NA	NA	33036863	33017459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33020040_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_26931.known	chr13	+	1855	6	FSM	ENSG00000134882.16	ENST00000494576.5	1855	6	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_5	15.9949992185058	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTCTATCAGACTT	99244491	False	NA	23	True	AATAAA	-24	NA	99244514	99386434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_26932.known	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	TRUE	canonical	3	1312	junction_3	160.328958706779	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	99491788	True	NA	NA	False	NA	NA	NA	99501471	99564048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_26934.known	chr13	+	1169	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	6	6	6	-6	multi-exon	FALSE	canonical	3	50	junction_8	24.6056395974581	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	99605424	True	NA	5	True	ATTAAA	-16	NA	99606695	99892564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_26936.known	chr13	+	6771	8	FSM	ENSG00000125246.16	ENST00000376355.7	6771	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	22.1147286777341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTTGAAACCAGCCAC	99605397	True	NA	NA	False	ATTAAA	-24	NA	99606668	99897134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317
transcript_2694.known	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	586.664459039407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	-33016774	True	NA	NA	False	NA	NA	NA	33036844	33019682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_26941.nic	chr13	+	1016	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	-49	27332	-28	0	5prime_fragment	FALSE	canonical	3	89	junction_3	14.6692706021806	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	99605369	True	NA	8	True	AATAAA	-22	NA	99606640	99865238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
transcript_26944.known	chr13	+	218	2	FSM	ENSG00000043355.12	ENST00000481565.1	218	2	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAAATATAAAACAAATA	99985482	False	NA	-32	True	NA	NA	NA	99985493	99985904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99985673_99985865
transcript_26945.known	chr13	-	913	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	119	6	102	-6	multi-exon	FALSE	canonical	3	205	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGATTTGAGGATTGC	-100086818	True	NA	-7	True	AATAAA	-19	NA	100088848	100086030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100086728_100088632
transcript_26955.nic	chr13	+	2565	25	NIC	ENSG00000175198.17	novel	2484	24	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_22	90.8799479013691	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	100083243	True	NA	16	True	AATAAA	-19	NA	100089059	100530435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527296_100527345_100527674_100527753_100530097
transcript_26959.known	chr13	+	2484	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_10	29.9982986285042	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	100083276	True	NA	16	True	AATAAA	-19	NA	100089092	100530435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_26962.known	chr13	+	2418	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_21	61.3643265954447	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100089014	100530432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
transcript_26966.known	chr13	+	2481	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	70.0828464882872	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100089014	100530432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_26967.nic	chr13	+	2128	22	NIC	ENSG00000175198.17	novel	2418	23	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_21	72.7558898037388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTTCTCTATTTTTT	100083243	True	NA	6	True	AATAAA	-17	NA	100089059	100491817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100491649
transcript_26989.known	chr13	-	2644	3	FSM	ENSG00000134864.11	ENST00000683975.1	2644	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAATCCTTCATTCC	-100588588	True	NA	NA	False	ATTAAA	-18	NA	100588789	100530179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100532602_100583824_100583998_100588740
transcript_26991.known	chr13	-	348	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	-100540236	False	NA	NA	False	NA	NA	NA	100540248	100539900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100539900_100540200
transcript_26992.known	chr13	-	3911	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	29.0688837074973	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTTTTTTTG	-100672978	True	NA	-2	True	AATAAA	-16	NA	100674795	100603624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_27.known	ERCC-00069	+	1121	1	FSM	ERCC-00069A	DQ459421	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00069_+_0_1100
transcript_27004.known	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	102394119	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102394600_102395700
transcript_27005.known	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_24	70.5195767255149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	102590661	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_27007.known	chr13	+	3931	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	43.1062255790677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGACGTGTGGCTTAA	102590678	True	NA	10	True	ATTAAA	-23	NA	102597002	102678461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_2701.known	chr1	-	2840	8	FSM	ENSG00000004455.17	ENST00000672308.1	2840	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	615.188174297847	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAGGGACTCTTTTAA	-33016793	True	NA	-53	True	NA	NA	NA	33036863	33010118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33011447_33011711_33012073_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_27010.nnic	chr13	+	2113	14	NNC	ENSG00000134900.12	novel	4341	27	NA	NA	-39	5505	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	68.0128773048894	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAATACTCATCTTT	102590622	True	NA	NA	False	TTTAAA	-10	NA	102596946	102637037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102636694
transcript_27012.nic	chr13	+	2415	13	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-56	41424	-39	5505	5prime_fragment	FALSE	canonical	3	243	junction_8	17.4801474695025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAATACTCATCTTT	102590622	True	NA	NA	False	TTTAAA	-10	NA	102596946	102637037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223
transcript_27015.known	chr13	+	691	3	FSM	ENSG00000134900.12	ENST00000490010.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTGTCTTTTCTCAG	102590708	True	NA	NA	False	AATAAA	-14	NA	102597032	102608022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102607631
transcript_27018.known	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	26.0353605698097	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	-102772290	True	NA	1	True	AATAAA	-15	NA	102773786	102765887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_2702.known	chr1	+	2048	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.48660687473185	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	33081034	True	NA	9	True	AATAAA	-26	NA	33081166	33120529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_27021.known	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	60.0187470712277	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772263	True	NA	0	True	ATTAAA	-23	NA	102773759	102766109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
transcript_27022.known	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	65.9640053362438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772315	True	NA	0	True	ATTAAA	-23	NA	102773811	102766109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_27027.known	chr13	-	828	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	80.6597793203031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772259	True	NA	0	True	ATTAAA	-23	NA	102773755	102766109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
transcript_2703.known	chr1	+	2136	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.41039614232874	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	34166867	False	NA	8	True	GATAAA	-19	NA	34166882	34219131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_27032.known	chr13	-	2029	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	10.9217192152739	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTGTGCTAATTATTA	-102797630	True	NA	-2	True	AATAAA	-21	NA	102798976	102784280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
transcript_27036.known	chr13	+	3888	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	0	0	0	0	multi-exon	TRUE	non_canonical	3	73	junction_8	12.0781891466074	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTAGTGTGTGGTT	102845201	True	NA	23	True	AATAAA	-20	NA	102846031	102875995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_27037.nic	chr13	-	1799	5	NIC	ENSG00000134884.15	novel	821	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_3	619.702146196058	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106547854	True	NA	-7	True	AATAAA	-35	NA	106568169	106543326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_106544161_106557047_106557132_106557558_106557617_106559431_106559658_106567572
transcript_27039.known	chr13	-	3363	4	FSM	ENSG00000134884.15	ENST00000400198.8	3363	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	251.142721707532	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	-106547822	True	NA	NA	False	TATAAA	-17	NA	106568137	106541672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_106544161_106557047_106557132_106559431_106559658_106567572
transcript_27041.known	chr13	-	4009	3	FSM	ENSG00000134884.15	ENST00000472226.2	4009	3	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_2	41	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106547822	True	NA	-7	True	AATAAA	-35	NA	106568137	106543326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_106544161_106557047_106559658_106567572
transcript_27043.known	chr13	+	5313	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTCTTCAGATAGTTT	108216695	True	NA	12	True	AATAAA	-21	NA	108218391	108234243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_108218660_108229198
transcript_27046.known	chr13	-	1507	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGACTGAACTGAC	-110559605	True	NA	-1	True	ATTAAA	-22	NA	110561722	110523065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110524198_110561347
transcript_27048.known	chr13	+	1191	10	FSM	ENSG00000213995.12	ENST00000679389.1	1191	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	46.5951833466841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCTTGGACGGGGGAG	110613611	True	NA	NA	False	AGTAAA	-2	NA	110615559	110638551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_27049.known	chr13	+	2515	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	9.54521404218424	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613596	True	NA	10	True	ATTAAA	-23	NA	110615544	110639996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_2705.known	chr1	-	897	2	FSM	ENSG00000163866.9	ENST00000423898.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGGGATACCTGCA	-34851496	True	NA	-87	True	NA	NA	NA	34859717	34855348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34855983_34859454
transcript_27050.known	chr13	+	2559	10	FSM	ENSG00000213995.12	ENST00000680505.1	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	38.2925709198837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613679	True	NA	10	True	ATTAAA	-23	NA	110615627	110639996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27052.nic	chr13	+	2622	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	127	junction_3	9.77800465330223	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613565	True	NA	10	True	ATTAAA	-23	NA	110615513	110639996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27054.known	chr13	+	2377	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	42.5776863509515	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613642	True	NA	7	True	ATTAAA	-20	NA	110615590	110639993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_2706.known	chr1	-	5694	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAATCAGATCCT	-34851528	True	NA	0	True	ATTAAA	-15	NA	34859749	34850361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34855983_34859676
transcript_27063.known	chr13	+	2216	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	51.9326486903951	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613606	True	NA	7	True	ATTAAA	-20	NA	110615554	110639993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27066.nnic	chr13	+	2113	6	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	48.8696224663134	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613603	True	NA	10	True	ATTAAA	-23	NA	110615551	110639996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_110615648_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_2707.known	chr1	+	1355	2	FSM	ENSG00000189280.3	ENST00000338513.1	1355	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTCTGGTTGT	34754975	True	NA	2	True	AATAAA	-20	NA	34755046	34758512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34755196_34757306
transcript_27074.known	chr13	-	1838	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	36.5971589172756	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-110701149	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_27077.known	chr13	+	4697	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	110711864	True	NA	NA	False	AATAAA	-19	NA	110713699	110723339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110714286_110719228
transcript_2708.known	chr1	+	1621	2	FSM	ENSG00000187513.9	ENST00000342280.5	1621	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGTGTATTGATGCTA	34792860	True	NA	6	True	AATAAA	-17	NA	34792998	34795747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34793069_34794196
transcript_27084.nic	chr13	-	2676	7	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	296.358313532791	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897643	True	NA	-1	True	AATAAA	-16	NA	110915085	110878539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_110880113_110883697_110883794_110893027_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
transcript_27089.known	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	286.883530374262	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897627	True	NA	-1	True	AATAAA	-16	NA	110915069	110878539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_27090.nnic	chr13	-	2526	6	NNC	ENSG00000088448.14	novel	2495	6	NA	NA	-16	-3	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	294.972134277121	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTGTCCCTGGGGTTT	-110897643	True	NA	-4	True	AATAAA	-13	NA	110915085	110878542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_110880131_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_27099.nnic	chr13	-	2275	5	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	288.623781937664	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897643	True	NA	-1	True	AATAAA	-16	NA	110915085	110878539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_110880113_110883697_110883794_110906032_110906125_110910617_110910771_110914724
transcript_2710.known	chr1	-	5122	16	FSM	ENSG00000163867.17	ENST00000357182.9	5122	16	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_15	19.553232185214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	-35031135	True	NA	1	True	AATAAA	-22	NA	35031945	34986164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031814
transcript_27101.known	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	137.812372448921	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	-110897564	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_27103.known	chr13	-	997	5	FSM	ENSG00000088448.14	ENST00000465753.1	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	152.736701548776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCACCTTCGAGATGAG	-110897595	True	NA	31	True	NA	NA	NA	110915037	110892956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110893264_110900529_110900662_110906032_110906125_110910617_110910771_110914724
transcript_27104.nic	chr13	-	1337	5	NIC	ENSG00000088448.14	novel	997	5	NA	NA	-16	-6	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	144.65886595712	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897643	True	NA	-6	True	ATTAAA	-18	NA	110915085	110892697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
transcript_27105.nnic	chr13	-	1236	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	154.548333863552	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897643	True	NA	-6	True	ATTAAA	-18	NA	110915085	110892697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
transcript_27107.nic	chr13	-	1170	4	ISM	ENSG00000088448.14	ENST00000267339.6	2495	6	-16	14160	-16	-8	5prime_fragment	FALSE	canonical	3	147	junction_1	107.908397366573	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAATTTTTTTTTTTT	-110897643	True	NA	-8	True	ATTAAA	-16	NA	110915085	110892699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_110893264_110906032_110906125_110910617_110910771_110914724
transcript_27108.known	chr13	-	535	4	FSM	ENSG00000088448.14	ENST00000460846.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	174.997777763668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTTTCCATTTC	-110914793	False	NA	NA	False	AATAAA	-18	NA	110914803	110905022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110905234_110906032_110906125_110910617_110910771_110914724
transcript_27110.nic	chr13	+	2074	15	ISM	ENSG00000102606.19	ENST00000466143.5	1681	16	-49	2117	-7	0	5prime_fragment	FALSE	canonical	3	88	junction_3	23.5537812727574	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTTGATTTTAAGAAAT	111149384	True	NA	NA	False	ATTAAA	-14	NA	111153639	111281109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537
transcript_27114.known	chr13	+	1536	8	FSM	ENSG00000126218.12	ENST00000375559.8	1536	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	3.53986048381825	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTTTGTCTCTCGAT	113122670	True	NA	17	True	ATTAAA	-17	NA	113122798	113149529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147497_113148915
transcript_27117.known	chr13	-	1671	15	FSM	ENSG00000126226.22	ENST00000375479.6	1671	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	246.403445924089	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	-113200476	True	NA	-19	True	AATAAA	-21	NA	113208715	113177610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27120.known	chr13	-	1654	15	FSM	ENSG00000126226.22	ENST00000375477.5	1654	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	249.586688960214	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	-113200427	True	NA	-19	True	AATAAA	-21	NA	113208666	113177610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27126.known	chr13	-	1897	14	FSM	ENSG00000126226.22	ENST00000337344.9	1897	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	220.585047801544	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCTCACTCTAGCC	-113200430	True	NA	56	True	AATACA	-22	NA	113208669	113177535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27147.known	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	519.11231925278	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	113196461	True	NA	35	True	CATAAA	-17	NA	113209599	113230212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
transcript_2715.known	chr1	-	2702	4	FSM	ENSG00000163867.17	ENST00000317538.9	2702	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	32.5678778348646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTTACCATTGAATA	-35031095	False	NA	0	True	ATTAAA	-25	NA	35031905	35017243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031814
transcript_27153.known	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	27.5206786817121	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358056	True	NA	-1	True	NA	NA	NA	113364130	113324162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_27160.nnic	chr13	-	1286	7	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	138	junction_5	146.125136631435	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358086	True	NA	-1	True	NA	NA	NA	113364160	113324162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
transcript_27164.known	chr13	-	1834	7	FSM	ENSG00000139835.14	ENST00000375430.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_5	16.8267313786394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	-113358074	True	NA	NA	False	NA	NA	NA	113364148	113324844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_2717.known	chr1	-	922	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	18.5	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTCTCTTTTGCCTC	-34983192	True	NA	-9	True	TATAAA	-12	NA	34985353	34981534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34982120_34983766_34983948_34985197
transcript_27172.nic	chr13	-	1898	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	-12	940	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	235.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	-113358086	True	NA	-3	True	ATTAAA	-25	NA	113364160	113358676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113360285_113363761_113363911_113364019
transcript_27173.known	chr13	-	877	3	FSM	ENSG00000139835.14	ENST00000476439.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTTTCTCTTAAATACA	-113358057	True	NA	NA	False	NA	NA	NA	113364131	113359616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113360285_113363761_113363911_113364071
transcript_27177.known	chr13	+	2843	9	FSM	ENSG00000150403.18	ENST00000474393.5	2843	9	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_8	42.6079511359089	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTTCTGCTTACCGAG	113489045	True	NA	4	True	AATAAA	-15	NA	113491095	113535286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044
transcript_27183.nnic	chr13	+	1474	10	NNC	ENSG00000184497.13	novel	6117	9	NA	NA	-21	285	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	11.6999525165228	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCCCCGGCCTCCCTG	113758796	True	NA	20	True	NA	NA	NA	113759204	113812238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113799970_113800064_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_27184.known	chr13	+	6117	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	7.45716936913733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCGTATTACGTGAAGT	113758817	True	NA	NA	False	TTTAAA	-16	NA	113759225	113816995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_27188.known	chr13	+	694	5	FSM	ENSG00000184497.13	ENST00000488362.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	7.98044484975618	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	113758831	True	NA	9	True	ATTAAA	-17	NA	113759239	113799660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338
transcript_27189.known	chr13	+	2211	19	FSM	ENSG00000130177.16	ENST00000360383.7	2211	19	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_18	56.6237310107719	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230576	True	NA	11	True	AATAAA	-15	NA	114234886	114272675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_27190.known	chr13	+	2331	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	36.9713252769435	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	114230586	True	NA	8	True	AATAAA	-18	NA	114234896	114272723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_27197.known	chr13	+	2370	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	107.021054810909	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGAATCTGTGTCA	114277726	True	NA	8	True	AATAAA	-25	NA	114281600	114305817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27199.known	chr13	+	2235	9	FSM	ENSG00000169062.15	ENST00000351487.5	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_3	122.491772682903	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114277753	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27206.nic	chr13	+	2228	9	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	307	9	-17	0	3prime_fragment	FALSE	canonical	3	283	junction_2	84.6153059440194	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114278033	False	NA	-1	True	AATAAA	-16	NA	114281907	114305808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27214.nic	chr13	+	2129	8	ISM	ENSG00000169062.15	ENST00000351487.5	2235	9	280	0	-17	0	3prime_fragment	FALSE	canonical	3	215	junction_2	101.954972053994	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114278033	False	NA	-1	True	AATAAA	-16	NA	114281907	114305808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27219.nic	chr13	+	855	7	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-18	14073	-18	0	5prime_fragment	FALSE	canonical	3	220	junction_1	121.621909575902	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114281570	False	NA	-13	True	AAAAAG	-35	NA	114281582	114291744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_2722.known	chr1	+	4161	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	21.5807413000974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	35074307	True	NA	9	True	ATTAAA	-21	NA	35079384	35115859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_27223.nnic	chr13	+	2030	7	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	162.67699762276	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114278025	False	NA	-1	True	AATAAA	-16	NA	114281899	114305808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_114282128_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27232.known	chr13	+	699	6	FSM	ENSG00000169062.15	ENST00000484246.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	172.886552397808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAATTGCAGAGAAA	114277770	False	NA	0	True	GATAAA	-2	NA	114281644	114291757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_27244.nic	chr13	+	605	5	ISM	ENSG00000169062.15	ENST00000480362.5	965	8	188	13205	-17	0	internal_fragment	FALSE	canonical	3	215	junction_2	130.635705302953	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114278033	False	NA	-13	True	AAAAAG	-35	NA	114281907	114291744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633
transcript_27255.known	chr13	+	494	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	114277728	True	NA	NA	False	AATAAA	-16	NA	114281602	114282270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282020
transcript_27258.known	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	14.8656535113996	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-20303605	True	NA	0	True	TATAAA	-34	NA	20305951	20286226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
transcript_27259.known	chr14	-	1755	10	FSM	ENSG00000136319.12	ENST00000383029.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.5509866876061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	-20303595	True	NA	NA	False	ATTAAA	-23	NA	20305941	20289130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300674_20300819_20301832_20301966_20305886
transcript_27263.nnic	chr14	-	1613	8	NIC	ENSG00000136319.12	novel	4737	10	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	72.7124613860398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	-20303628	True	NA	NA	False	ATTAAA	-23	NA	20305974	20289130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20300606_20300819_20301832_20301966_20305886
transcript_27267.known	chr14	-	1294	8	FSM	ENSG00000100814.18	ENST00000556854.5	1294	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.321291901069	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAGATGGAGATTTTC	-20326791	True	NA	NA	False	AATACA	-18	NA	20333303	20311703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20315484_20315619_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_2727.known	chr1	+	3980	9	FSM	ENSG00000197056.11	ENST00000373329.5	3980	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.9890607904814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTTTTGATCTTTCC	35074313	True	NA	4	True	ATTAAA	-16	NA	35079390	35115854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_27272.known	chr14	-	1686	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	198.004122818342	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326800	True	NA	-8	True	AATAAA	-22	NA	20333312	20311367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_27280.known	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	160.309769578221	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20332986	False	NA	-8	True	AATAAA	-22	NA	20333010	20311367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
transcript_27281.known	chr14	-	1470	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	102.256893274841	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	-20326767	True	NA	-10	True	AATAAA	-20	NA	20333279	20311369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_27289.known	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	172.350805045988	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326800	True	NA	-8	True	AATAAA	-22	NA	20333312	20311367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
transcript_27293.known	chr14	+	1827	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	31.7851118187955	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336364	True	NA	14	True	AATAAA	-16	NA	20343634	20357904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_27295.nic	chr14	+	1817	16	NIC	ENSG00000129484.14	novel	1827	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	84.5442684830458	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336348	True	NA	14	True	AATAAA	-16	NA	20343618	20357904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354834_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_27297.known	chr14	+	1886	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	87.3574012637484	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336344	True	NA	14	True	AATAAA	-16	NA	20343614	20357904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_273.known	chr1	-	1187	3	FSM	ENSG00000237613.2	ENST00000417324.1	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	36081	34553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35175_35276_35482_35720
transcript_27315.nnic	chr14	+	1623	14	NIC	ENSG00000129484.14	novel	1886	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	89.0436366663516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336341	True	NA	14	True	AATAAA	-16	NA	20343611	20357904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_20343688_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_27339.known	chr14	-	1976	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_8	12.6984250992003	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTACTCCGTATACT	-20454778	False	3755	NA	False	NA	NA	NA	20454812	20446400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
transcript_27367.known	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	78.622869163848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	-20457710	True	NA	-16	True	AATAAA	-17	NA	20461465	20457857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
transcript_27368.known	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	80.3258986877831	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-20457679	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
transcript_27373.known	chr14	+	899	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	983.469750424486	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	20392809	True	NA	-32	True	NA	NA	NA	20455200	20457342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27376.known	chr14	+	1437	5	FSM	ENSG00000100823.12	ENST00000555414.5	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_1	819.552126164041	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCGTGTCTTACCC	20392799	True	NA	20	True	AATAAA	-20	NA	20455190	20457772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455339_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27381.known	chr14	+	1387	5	FSM	ENSG00000100823.12	ENST00000398030.8	1387	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1017.92887153278	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455329_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27385.known	chr14	+	640	5	FSM	ENSG00000100823.12	ENST00000557592.5	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1125.73006866655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCGCAAGTTCCTG	20392856	True	NA	NA	False	NA	NA	NA	20455247	20457119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455339_20455734_20455774_20455913_20456102_20456667_20456861_20456990
transcript_27386.known	chr14	+	773	5	FSM	ENSG00000100823.12	ENST00000556054.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	981.344071923808	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGAGGTCTGGTACGA	20392855	True	NA	NA	False	NA	NA	NA	20455246	20457074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455429_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_2739.nic	chr1	+	1315	4	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-25	17554	-22	711	5prime_fragment	FALSE	canonical	3	66	junction_1	30.4010233745876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTAAAAATTTATGTGA	35074282	True	NA	NA	False	GATAAA	-20	NA	35079359	35098305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316
transcript_27396.known	chr14	+	654	4	FSM	ENSG00000100823.12	ENST00000554813.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1088.30459380124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTGGCTTCCCGAAA	20392823	True	NA	NA	False	NA	NA	NA	20455214	20457139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455339_20455913_20456102_20456667_20456861_20456990
transcript_27397.known	chr14	+	831	4	FSM	ENSG00000100823.12	ENST00000557365.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	1073.96461766671	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTAGGCACCTCTAC	20392865	True	NA	-72	True	NA	NA	NA	20455256	20457302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455395_20455913_20456102_20456667_20456861_20456990
transcript_27404.known	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_2	215.388021951083	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	20392834	True	NA	-18	True	TTTAAA	-39	NA	20455225	20457734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27405.known	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_1	411.084845257034	2631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27406.known	chr14	+	1803	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_1	255	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	20392848	True	NA	-14	True	TTTAAA	-43	NA	20455239	20457738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20456102_20456667_20456861_20456990
transcript_2741.nnic	chr1	+	464	3	NNC	ENSG00000197056.11	novel	508	4	NA	NA	-11	-10899	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTGTGAATCTTATTC	35074293	True	NA	NA	False	AGTAAA	-36	NA	35079370	35086579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_35079443_35080746_35080909_35086349
transcript_27410.known	chr14	+	1477	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	31.6417445789577	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	20465415	True	NA	51	True	AATAAA	-17	NA	20469405	20477089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
transcript_27416.known	chr14	+	1635	5	FSM	ENSG00000198805.12	ENST00000554056.5	1635	5	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_3	18.4458667456967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGTCAGAATAAAGAGAA	20465423	True	NA	20	True	NA	NA	NA	20469413	20477058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20469536_20472307_20472478_20474471_20474949_20475061_20475253_20476383
transcript_27418.known	chr14	+	1222	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	NA	False	NA	15	True	AATAAA	-27	NA	20684176	20694186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20684759_20693546
transcript_27419.known	chr14	+	2061	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	20684199	True	NA	NA	False	ATTAAA	-22	NA	20684559	20701216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20684759_20699354
transcript_27421.known	chr14	-	878	3	FSM	ENSG00000129538.14	ENST00000340900.3	878	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCTAGGTACTGTT	-20802739	True	NA	11	True	AATAAA	-31	NA	20802855	20801345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20802094_20802248_20802320_20802796
transcript_27422.known	chr14	-	914	2	FSM	ENSG00000129538.14	ENST00000397967.5	914	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGTGGCTTGAGAAAAT	-20802728	True	NA	NA	False	ATTAAA	-22	NA	20802844	20801227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20802094_20802796
transcript_27427.known	chr14	+	1529	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	165.864812708044	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	20979702	True	NA	-3	True	AATAAA	-5	NA	20990002	20997016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_27431.known	chr14	+	1539	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	0	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	103.749356595995	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	20979679	True	NA	16	True	AATAAA	-24	NA	20989979	20997035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_27432.known	chr14	+	1500	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_13	182.973564876971	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	20979686	True	NA	11	True	AATAAA	-19	NA	20989986	20997030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
transcript_27437.known	chr14	+	1605	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	168.139244543193	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	20979693	True	NA	-9	True	NA	NA	NA	20989993	20997010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_27440.known	chr14	+	1586	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	0	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	96.4515926370437	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	20979679	True	NA	-10	True	NA	NA	NA	20989979	20997009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_2745.nnic	chr1	-	2498	11	NNC	ENSG00000116560.11	novel	3740	10	NA	NA	0	-664	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	690.832367510382	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTCATGTATTCAAGT	-35104552	True	NA	-12	True	ATTAAA	-16	NA	35193145	35183599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221_35192247_35192824
transcript_27460.known	chr14	-	2079	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	35.2878785845792	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024383	True	NA	-14	True	AATAAA	-17	NA	21025094	21016771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
transcript_27462.nic	chr14	-	2233	17	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	37.4023207000582	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21025035	False	NA	-14	True	AATAAA	-17	NA	21025613	21016771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
transcript_27463.known	chr14	-	2122	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	34.5377963251855	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	NA	False	NA	-5	True	AATAAA	-26	NA	21025776	21016762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
transcript_27468.known	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	36.8395922284104	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
transcript_27469.known	chr14	-	2054	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	38.5247972090704	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGTCTAGGTGT	NA	False	NA	-6	True	AATAAA	-25	NA	21025776	21016763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_27471.known	chr14	-	2162	16	FSM	ENSG00000165795.25	ENST00000553503.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	44.7032685854426	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024461	False	NA	-14	True	AATAAA	-17	NA	21025039	21016771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21024848
transcript_27472.nic	chr14	-	2021	16	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	40.9664361262838	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024367	True	NA	-14	True	AATAAA	-17	NA	21025078	21016771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025028
transcript_27474.nic	chr14	-	2098	16	NIC	ENSG00000165795.25	novel	2162	16	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	42.884651489004	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024942	False	578	-14	True	AATAAA	-17	NA	21025520	21016771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025393
transcript_27475.known	chr14	-	2127	16	FSM	ENSG00000165795.25	ENST00000350792.7	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	40.2925965077126	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	NA	False	NA	-5	True	AATAAA	-26	NA	21025823	21016762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025676
transcript_27478.known	chr14	-	1980	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	42.857202380911	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
transcript_27479.known	chr14	-	2047	15	FSM	ENSG00000165795.25	ENST00000360463.7	2047	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	44.3888775368289	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	NA	False	NA	-14	True	AATAAA	-17	NA	21025819	21016771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025676
transcript_27484.known	chr14	+	478	2	FSM	ENSG00000258604.1	ENST00000533984.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTTCATTAACTGCTG	21024149	False	NA	NA	False	AAAACA	-21	NA	21024171	21029245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21024345_21028940
transcript_27485.known	chr14	+	1611	7	FSM	ENSG00000232070.9	ENST00000673682.1	1611	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.22015325445528	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGGCGCTGTTGGATGTG	21098753	True	NA	4	True	AATAAA	-18	NA	21098810	21103722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21099199_21101076_21101185_21101307_21101452_21102063_21102193_21102404_21102516_21102632_21102780_21103138
transcript_27504.known	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	3068.17418663057	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	-21168426	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
transcript_2751.known	chr1	-	693	4	FSM	ENSG00000116560.11	ENST00000485365.1	693	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	190.482428469283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35181364	False	NA	-8	True	AATAAA	-17	NA	35181606	35176379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35181134
transcript_2752.known	chr1	-	434	4	FSM	ENSG00000116560.11	ENST00000490668.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	173.076733143296	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35181323	False	NA	-8	True	AATAAA	-17	NA	35181344	35176379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176475_35177318_35177400_35177988_35178037_35181134
transcript_27528.known	chr14	-	1714	9	FSM	ENSG00000092199.19	ENST00000555309.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2805.80899374405	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168422	True	NA	-92	True	NA	NA	NA	21269421	21210612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_2753.known	chr1	-	1431	3	FSM	ENSG00000116560.11	ENST00000466213.5	1431	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35179192	False	NA	-8	True	AATAAA	-17	NA	35179246	35176379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176472_35177318_35177400_35177988
transcript_27533.known	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2381.63415208445	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168405	True	NA	-92	True	NA	NA	NA	21269404	21210612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_2754.known	chr1	-	2835	3	FSM	ENSG00000116560.11	ENST00000468598.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	130	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35180604	False	NA	-6	True	AATAAA	-19	NA	35180645	35176377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176475_35177318_35177400_35177988
transcript_27545.known	chr14	-	748	9	FSM	ENSG00000092199.19	ENST00000554539.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2528.31747104176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACAGCGCCAATGGCGA	-21168446	True	NA	29	True	AAAAAG	-24	NA	21269445	21211255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231028_21234218_21234230_21263310_21263337_21269297
transcript_2755.known	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1936	junction_9	195.766868153594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-35104552	True	NA	-14	True	CATAAA	-14	NA	35193145	35182935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_27556.nic	chr14	-	2040	8	NIC	ENSG00000092199.19	novel	3165	9	NA	NA	-252	0	combination_of_known_junctions	FALSE	canonical	3	2080	junction_7	2011.2125695709	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	NA	False	NA	-29	True	AATAAA	-36	NA	21269746	21210549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_27559.known	chr14	-	1156	8	FSM	ENSG00000092199.19	ENST00000556628.5	1156	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2699.2800476257	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGTTATGCAG	-21168411	True	NA	5	True	AATAAA	-33	NA	21269410	21210922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21234077_21234230_21263310_21263337_21269297
transcript_2756.known	chr1	-	3213	21	FSM	ENSG00000142687.18	ENST00000426982.6	3213	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	57.8863325837801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAATGGCTCTGTACCC	-35557047	True	NA	NA	False	NA	NA	NA	35557655	35434964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557549
transcript_27562.known	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	5281	junction_7	997.361867066087	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	-21168404	True	NA	-61	True	AATAAA	-4	NA	21269403	21210581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_27564.known	chr14	-	1308	8	FSM	ENSG00000092199.19	ENST00000557442.5	1308	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2637.68262545991	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTACAGTTCTTTTCAT	-21168425	True	NA	5	True	NA	NA	NA	21269424	21210903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213045_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_27570.known	chr14	-	1371	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_5	2716.54956719372	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	-21168426	True	NA	-9	True	AATAAA	-19	NA	21269425	21210936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
transcript_27586.known	chr14	-	3301	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_6	2035.65572291147	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	-21269483	False	NA	3	True	ATTAAA	-31	NA	21269494	21209135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_2759.known	chr1	-	4777	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_20	32.5743764330186	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTGCTGGGTGTG	-35552014	True	NA	-7	True	ATTAAA	-18	NA	35557403	35433491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_2760.known	chr1	+	3433	8	FSM	ENSG00000020129.16	ENST00000356090.8	3433	8	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	30.5774359918672	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	35553098	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_2761.known	chr1	+	1379	5	FSM	ENSG00000116819.9	ENST00000650429.1	1379	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATAGTCCTGTTGCTGTC	35577626	False	NA	-62	True	GATAAA	-37	NA	35577735	35595261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35577763_35588329_35588553_35589929_35590049_35590633_35590776_35594393
transcript_27613.known	chr14	-	929	2	FSM	ENSG00000092199.19	ENST00000555127.1	929	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACTGAAAAGAATTTTA	-21168390	True	NA	NA	False	NA	NA	NA	21269389	21262992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21263830_21269297
transcript_27614.known	chr14	-	1039	9	FSM	ENSG00000092199.19	ENST00000554383.5	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	3108.87539956171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATGACCAGGTGAAAAC	-21168443	True	NA	NA	False	AATGAA	-7	NA	21269442	21211417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21268622_21268669_21269297
transcript_27615.known	chr14	-	1599	8	NNC	ENSG00000092199.19	novel	4501	8	NA	NA	-2823	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2711.20781880229	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCTGGTTTT	NA	False	NA	-35	True	AATAAA	-30	NA	21234245	21210555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_21211236_21211237_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952
transcript_27616.known	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1308	junction_10	133.961391452911	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-21347440	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_2762.known	chr1	-	852	3	FSM	ENSG00000239636.2	ENST00000444348.2	902	3	42	8	42	-2	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAATGGATGGTGTTA	-35577702	False	NA	NA	False	ATTAAA	-17	NA	35577729	35569814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35569920_35574359_35574699_35577321
transcript_27621.nic	chr14	-	1498	12	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-23	11769	-23	6104	5prime_fragment	FALSE	canonical	3	1526	junction_7	85.5918625930571	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAACAAGAGTAAGTTT	-21347463	True	NA	28	True	NA	NA	NA	21384042	21363244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_27623.nic	chr14	-	1414	11	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-23	11962	-23	5911	5prime_fragment	FALSE	canonical	3	1526	junction_6	89.3913306758547	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGGAAGAAGATAGATAAG	-21347463	True	NA	0	True	AAGAAA	-28	NA	21384042	21363437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_27624.nic	chr14	-	1215	9	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-23	13614	-23	4259	5prime_fragment	FALSE	canonical	3	1526	junction_4	80.1810451416044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATACAAACTGAAGAAAG	-21347463	True	NA	NA	False	NA	NA	NA	21384042	21365089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_27626.nic	chr14	-	1537	3	ISM	ENSG00000092201.10	ENST00000556217.5	1027	5	-32	1346	-23	-962	5prime_fragment	FALSE	canonical	3	1619	junction_1	91.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCAGGCATGGTGGTA	-21347463	True	NA	NA	False	NA	NA	NA	21384042	21370781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21372045_21373337_21373431_21383861
transcript_27627.nic	chr14	-	439	3	ISM	ENSG00000092201.10	ENST00000556217.5	1027	5	-32	2444	-23	195	5prime_fragment	FALSE	canonical	3	1619	junction_1	91.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTCAGGATTAATAA	-21347463	True	NA	-1	True	NA	NA	NA	21384042	21371879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21372045_21373337_21373431_21383861
transcript_27628.known	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-21347402	True	NA	NA	False	AATAAA	-23	NA	21383981	21382974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21383770_21383861
transcript_27640.known	chr14	-	1980	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	74.5601099784597	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-21502021	True	NA	-11	True	AATAAA	-21	NA	21511340	21498137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_27661.known	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	143.148545828589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-21502021	True	NA	-35	True	TTTAAA	-1	NA	21511340	21498161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
transcript_27662.known	chr14	+	2000	9	FSM	ENSG00000092203.15	ENST00000455393.5	2000	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	151.561662368819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCTATGGAGCAGGGC	21470843	True	NA	NA	False	NA	NA	NA	21477202	21496755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21477285_21477495_21477565_21487450_21487603_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_27664.known	chr14	+	4514	9	FSM	ENSG00000092203.15	ENST00000448790.7	4514	9	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	35.134562755213	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATTGCAATTCTAGC	21470835	True	NA	17	True	AATAAA	-22	NA	21477194	21499170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_27673.known	chr14	-	2124	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	147.543002206136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTAAATAAACATTT	-21501991	True	NA	-46	True	NA	NA	NA	21511310	21498172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
transcript_27674.nic	chr14	-	2277	9	NIC	ENSG00000165819.12	novel	2030	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	357	junction_6	62.6766254276664	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGGATTCTGAAGTCCA	-21502038	True	NA	-19	True	AATAAA	-13	NA	21511357	21498145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_27700.nnic	chr14	+	1574	6	NNC	ENSG00000092203.15	novel	3766	6	NA	NA	4	212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.757856981043	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTGAGCCTAGGAGAAAA	21470839	True	NA	16	True	ATTAAA	-19	NA	21477198	21496967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_21477285_21477495_21477565_21487450_21487640_21492613_21493258_21495228_21495393_21496545
transcript_27705.nic	chr14	+	718	5	ISM	ENSG00000092203.15	ENST00000448790.7	4514	9	4	9939	4	381	5prime_fragment	FALSE	canonical	3	427	junction_4	39.0928382187838	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAAAAGAAAGATC	21470839	True	NA	16	True	AAAAAG	-15	NA	21477198	21489231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172
transcript_27711.known	chr14	-	1592	4	FSM	ENSG00000165819.12	ENST00000536201.5	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	70.0587055420111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTTTTTATTTTCCC	-21502021	True	NA	-56	True	NA	NA	NA	21511340	21501151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21501904_21503172_21503578_21503663_21503882_21511123
transcript_27712.known	chr14	+	3633	7	FSM	ENSG00000092203.15	ENST00000613005.4	3633	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_4	29.209967857261	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	21477122	False	NA	NA	False	NA	NA	NA	21477181	21496227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21477285_21477495_21477565_21487450_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
transcript_27714.known	chr14	-	1553	3	FSM	ENSG00000165819.12	ENST00000538267.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	68.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCTCTTATCTGAAG	-21501940	True	NA	NA	False	NA	NA	NA	21511259	21502378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21503578_21503663_21503882_21511123
transcript_27715.known	chr14	-	802	2	FSM	ENSG00000165819.12	ENST00000367606.7	802	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTTGCCCAGGCTGG	-21502021	True	NA	NA	False	AATAAA	-13	NA	21511340	21507650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21508236_21511123
transcript_27717.known	chr14	-	2914	8	FSM	ENSG00000129472.15	ENST00000397762.6	2914	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.03391773769796	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-21474003	True	NA	-9	True	ATTAAA	-22	NA	21476959	21459019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_27721.known	chr14	-	1466	3	FSM	ENSG00000165821.12	ENST00000611430.4	1466	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGTGTGCAGAGGTG	-21526485	False	NA	NA	False	NA	NA	NA	21526500	21521536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21522245_21525336_21525655_21526060
transcript_27722.known	chr14	-	1566	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTATGTGTTTCTCC	-21536895	False	10041	-7	True	ATTAAA	-13	NA	21536934	21521082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21522245_21525336_21525655_21536848
transcript_27723.known	chr14	-	4942	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTGTTTCTCCTT	-21527175	True	NA	-5	True	ATTAAA	-15	NA	21537216	21521080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21525655_21536848
transcript_27727.known	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	117.5	2154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568737	True	NA	-6	True	ATTAAA	-20	NA	22589224	22564906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22575058_22575234_22588946
transcript_27728.known	chr14	-	501	3	FSM	ENSG00000129562.11	ENST00000543337.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAACTTTCTAACAAAC	-22568735	True	NA	-103	True	NA	NA	NA	22589222	22565003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22575058_22575234_22589030
transcript_27729.known	chr14	-	591	3	FSM	ENSG00000129562.11	ENST00000535847.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1026.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568733	True	NA	-6	True	ATTAAA	-20	NA	22589220	22564906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22575058_22575234_22589035
transcript_27730.known	chr14	-	441	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGCCTCTGGCTCTGT	-22568670	True	NA	-7	True	ATTAAA	-45	NA	22589157	22564907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22588946
transcript_27732.nnic	chr14	+	2366	7	NNC	ENSG00000100439.11	novel	3051	7	NA	NA	-65	1	intron_retention	FALSE	canonical	0	0	junction_3	89.151088981945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGGGGATGATGTTTAA	22592915	True	NA	18	True	AATAAA	-18	NA	22598224	22612359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_22598330_22601666_22601756_22603389_22603607_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_27733.known	chr14	+	3366	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-63	-252	-53	252	multi-exon	FALSE	canonical	3	176	junction_1	27.6792140222386	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTCTTCTCTGA	22592927	True	NA	NA	False	AATATA	-25	NA	22598236	22613215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_27735.known	chr14	+	1003	6	FSM	ENSG00000100439.11	ENST00000418446.6	1003	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	89.8140300843916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAACAGGACGACAGTG	22592994	True	NA	NA	False	NA	NA	NA	22598303	22611074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22606421_22606534_22609723_22609911_22610858
transcript_2774.known	chr1	-	4426	6	FSM	ENSG00000126067.12	ENST00000373237.4	4426	6	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_4	70.4602015324963	2518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATGGCCTCGTCATTC	-35603959	True	NA	NA	False	CATAAA	-19	NA	35641526	35599540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35603375_35605232_35605283_35609245_35609409_35631273_35631345_35636309_35636433_35641341
transcript_27743.known	chr14	+	2806	10	FSM	ENSG00000155463.14	ENST00000612549.6	2806	10	0	0	0	0	multi-exon	FALSE	canonical	3	812	junction_1	34.0993465054503	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAAGTGTTCTGTTGTCT	22756149	True	NA	NA	False	NA	NA	NA	22766687	22773042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_27750.known	chr14	+	1679	9	FSM	ENSG00000155463.14	ENST00000495424.5	1679	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	290.16536233672	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGTTAGTAAACCT	22756164	True	NA	-16	True	NA	NA	NA	22766702	22771754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769796_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_27757.known	chr14	-	380	2	FSM	ENSG00000258458.8	ENST00000554730.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAGCCACTAAGTTGT	-22766447	True	NA	NA	False	AATAAA	-14	NA	22766530	22764384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22764658_22766423
transcript_27759.known	chr14	-	2272	11	FSM	ENSG00000155465.20	ENST00000555702.5	2272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.3851648071345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	-22819785	True	NA	-3	True	AATAAA	-17	NA	22819811	22773221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22819637
transcript_27760.known	chr14	-	2447	10	FSM	ENSG00000155465.20	ENST00000397532.9	2447	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.15739709641549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGAGTGGCTTCATT	-22815779	False	NA	-6	True	AATAAA	-14	NA	22815803	22773224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
transcript_27762.nic	chr14	+	535	6	NIC	ENSG00000172590.18	novel	586	5	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	57	junction_4	791.78567807204	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22829816	False	NA	18	True	AATAAA	-26	NA	22829849	22834347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_22829941_22830049_22830111_22830186_22830255_22830963_22831038_22833417_22833483_22834171
transcript_27767.known	chr14	+	1042	5	FSM	ENSG00000172590.18	ENST00000311892.10	1042	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	803.978972050886	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGCACAGTTTAGGCC	22807243	True	NA	-43	True	NA	NA	NA	22829915	22834977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22830963_22831038_22834171
transcript_27768.known	chr14	+	398	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	674.943886556505	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807248	True	NA	18	True	AATAAA	-26	NA	22829920	22834347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
transcript_27774.known	chr14	+	333	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	775.654992033615	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807240	True	NA	18	True	AATAAA	-26	NA	22829912	22834347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
transcript_27779.known	chr14	+	362	4	FSM	ENSG00000172590.18	ENST00000556654.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_1	760.65950916878	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807214	True	NA	17	True	AATAAA	-25	NA	22829886	22834346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829941_22830186_22830255_22833417_22833483_22834171
transcript_27784.known	chr14	+	922	3	FSM	ENSG00000172590.18	ENST00000557221.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	930.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCGAGACTCCGTCTCA	22807241	True	NA	NA	False	NA	NA	NA	22829913	22834828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22830111_22830186_22830255_22834171
transcript_27785.known	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_4	5.61303597347337	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	22828825	True	NA	19	True	AATAAA	-13	NA	22836584	22847758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_27789.nic	chr14	-	2208	18	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	209.462915101381	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920529	True	NA	-6	True	AATAAA	-20	NA	22929388	22920528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22920732_22920839_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_27791.nic	chr14	-	2065	18	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	209.680973687752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920534	True	NA	-6	True	AATAAA	-20	NA	22929393	22920528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22920732_22920987_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_27797.known	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	210.789281259152	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22920542	True	NA	-2	True	AATAAA	-24	NA	22929401	22920524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
transcript_27798.known	chr14	-	2304	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_14	81.1553053949648	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920517	True	NA	-6	True	AATAAA	-20	NA	22929376	22920528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_27801.known	chr14	-	1857	16	FSM	ENSG00000100462.16	ENST00000553897.5	1857	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	224.829317977488	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGCTTCAGGTTCTGC	-22920549	True	NA	NA	False	NA	NA	NA	22929408	22920875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929251
transcript_27803.known	chr14	-	10007	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	55.4387555894049	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGAGTGAGGGTTT	-22915461	True	NA	NA	False	AATAAA	-19	NA	22919149	22893203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_27808.known	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	34.2121648280582	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	-22915494	True	NA	-32	True	CATAAA	-41	NA	22919182	22900765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_27813.nic	chr14	-	1860	13	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_10	256.603496014116	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920535	True	NA	-6	True	AATAAA	-20	NA	22929394	22920528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22928125_22928212_22928496_22928616_22929251
transcript_27815.known	chr14	-	1743	12	FSM	ENSG00000100461.18	ENST00000542016.6	1743	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	65.6330898201421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAAGGAAAACCCTTAG	-22915490	True	NA	NA	False	NA	NA	NA	22919178	22901335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22911327_22911404_22918998
transcript_27817.known	chr14	-	2361	12	FSM	ENSG00000100461.18	ENST00000346528.9	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	66.1098509807291	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTACAAAAGGCAAGCCT	-22915490	True	NA	-43	True	CATAAA	-30	NA	22919178	22900776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_2783.known	chr1	-	2628	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	-35718413	True	NA	NA	False	AATAAA	-17	NA	35718884	35713876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35716327_35718706
transcript_27830.nic	chr14	-	1812	10	NIC	ENSG00000092036.19	novel	1642	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_9	70.3916731888154	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953272	True	NA	-32	True	AATAAA	-12	NA	22957154	22946235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_27831.nnic	chr14	-	1756	10	NNC	ENSG00000092036.19	novel	1642	10	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_9	82.3299594450418	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953267	True	NA	-32	True	AATAAA	-12	NA	22957149	22946235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956796
transcript_27832.known	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	40.8275506109403	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953208	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_27833.known	chr14	-	1642	10	FSM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	57.2139152546427	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953272	True	NA	-24	True	AATAAA	-20	NA	22957154	22946227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_27835.known	chr14	-	1447	9	FSM	ENSG00000092036.19	ENST00000490506.5	1447	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	80.3877322730278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953212	True	NA	-24	True	AATAAA	-20	NA	22957094	22946227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22955099_22955177_22956915
transcript_27836.known	chr14	-	1626	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	88.1616944880258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTATCTCCTGAAT	-22953255	True	NA	-66	True	NA	NA	NA	22957137	22946269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_27838.known	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	66.3474519103786	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-22953244	True	NA	-57	True	NA	NA	NA	22957126	22946260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_27839.known	chr14	-	1474	9	FSM	ENSG00000092036.19	ENST00000342454.12	1474	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	77.6140290153784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953247	True	NA	-32	True	AATAAA	-12	NA	22957129	22946235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_2784.nic	chr1	-	2203	11	ISM	ENSG00000092853.14	ENST00000318121.8	8512	25	-25	17658	-25	-2805	5prime_fragment	FALSE	canonical	3	61	junction_1	24.4550608259313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAAAGAAATGGATAA	-35767584	True	NA	NA	False	AATAGA	-8	NA	35770003	35749769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_27857.known	chr14	-	1776	8	FSM	ENSG00000100802.15	ENST00000397377.5	1776	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	21.5832512540136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATAATGAGATGCTC	-23009700	False	NA	36	True	GGGGCT	-2	NA	23010122	22987144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999403_23010100
transcript_27859.known	chr14	-	3360	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.4164673034842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGTTCGACTTAGGATT	-23009721	True	NA	NA	False	AATAAA	-37	NA	23010143	22985893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
transcript_27862.known	chr14	-	1625	1	FSM	ENSG00000280129.1	ENST00000623843.1	1625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTGTCTCCTCTTTTT	-23006701	False	422	NA	False	AATAAA	-19	NA	23007123	23005498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23005500_23007100
transcript_27869.known	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1345.9323905754	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015340	True	NA	-8	True	NA	NA	NA	23034890	23025857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
transcript_27870.known	chr14	-	444	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1498.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTTTGTTTGTTT	-23034665	False	NA	-3	True	AATAAA	-16	NA	23034727	23016542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23016636_23033367_23033675_23034683
transcript_27872.known	chr14	-	796	3	FSM	ENSG00000100804.19	ENST00000334454.10	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	1573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCATGGATCGGGGCT	-23015335	True	NA	NA	False	NA	NA	NA	23034885	23026296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23033367_23033675_23034475
transcript_27873.known	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3047	junction_2	58.5	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-23015350	True	NA	-6	True	NA	NA	NA	23034900	23025855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23033367_23033675_23034683
transcript_27875.known	chr14	-	900	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1559.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	-23035168	True	NA	-15	True	NA	NA	NA	23035230	23025901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23033367_23033675_23035111
transcript_27876.known	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015344	True	NA	-8	True	NA	NA	NA	23034894	23025857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23034683
transcript_27878.known	chr14	-	4935	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	168.303380173358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_2788.nic	chr1	-	2080	10	ISM	ENSG00000092853.14	ENST00000520551.1	4010	25	-75	14926	-25	-4366	5prime_fragment	FALSE	canonical	3	93	junction_1	18.6990459913776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGAGAAAGAAGAGAAAGA	-35767584	True	NA	-45	True	AAGAAA	-36	NA	35770003	35751330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_27880.known	chr14	-	2563	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	148.522070937472	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	-23067885	True	NA	-6	True	AATAAA	-17	NA	23071617	23058566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_27882.known	chr14	-	2445	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	132.429054763124	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	-23067829	True	NA	-6	True	AATAAA	-17	NA	23071561	23058566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_27887.known	chr14	+	725	2	FSM	ENSG00000179933.6	ENST00000554203.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAATCTAAGCAATCCA	23084159	True	NA	NA	False	NA	NA	NA	23095524	23098271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23095620_23097641
transcript_2789.nic	chr1	-	2708	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	22941	-25	-12381	5prime_fragment	FALSE	canonical	3	99	junction_4	17.2165084516375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCATAAATTTCTTCC	-35767584	True	NA	45	True	AATAAA	-17	NA	35770003	35759345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_27891.known	chr14	-	1191	2	FSM	ENSG00000092067.6	ENST00000206513.6	1191	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGACTGTTGGCTGTG	-23119245	False	NA	NA	False	AATAAA	-18	NA	23119255	23117305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23117823_23118581
transcript_27892.nic	chr14	-	3918	12	NIC	ENSG00000092068.21	novel	4236	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	1179.23044663924	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	-23142242	True	NA	29	True	AATAAA	-19	NA	23183654	23125294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763_23183039_23183350
transcript_27893.known	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	3847	junction_2	128.382864900266	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	-23142248	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_27894.known	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	1352.84829156857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-23154199	True	NA	NA	False	NA	NA	NA	23154401	23126667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
transcript_27895.known	chr14	-	1819	9	FSM	ENSG00000092068.21	ENST00000529705.6	1819	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_8	1355.48423081938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGTCAGCTGGAGAGACC	-23155361	False	NA	NA	False	NA	NA	NA	23155458	23126750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23155165
transcript_27899.nic	chr14	-	1843	2	ISM	ENSG00000092068.21	ENST00000524758.1	536	3	14	-814	0	814	intron_retention	FALSE	canonical	3	4329	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGAGGGCTGGGTGTCT	-23142248	True	NA	-4	True	ATTAAA	-15	NA	23183660	23165594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_23166541_23182763
transcript_279.nnic	chr1	-	1567	10	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4464	293	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_4	99.7921296285557	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCAACAGTGTGCTTTT	-199793	False	82	NA	False	AATAAA	-11	NA	199875	184923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188890_199836
transcript_2790.nic	chr1	-	2657	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	22992	-25	-12432	5prime_fragment	FALSE	canonical	3	99	junction_4	17.2165084516375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGTATTTTCTTAAAG	-35767584	True	NA	-6	True	AATAAA	-16	NA	35770003	35759396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_27901.known	chr14	+	2145	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1514.88870959854	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	23305247	True	NA	20	True	AATAAA	-33	NA	23306832	23326175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_27904.known	chr14	+	1811	7	FSM	ENSG00000100836.11	ENST00000216727.9	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	219.652503337026	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	23306276	True	NA	8	True	AATAAA	-21	NA	23321456	23326163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_27906.known	chr14	+	1220	6	FSM	ENSG00000100836.11	ENST00000556821.5	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	2777	junction_5	165.426720937096	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAGGAGAGAGAGGAAA	23306362	False	NA	9	True	AAAAAG	-7	NA	23321542	23325298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_27909.known	chr14	+	778	5	FSM	ENSG00000100836.11	ENST00000557702.5	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	3016	junction_1	104.48534586247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTCCCCGTGGTCTTC	23320812	False	NA	NA	False	NA	NA	NA	23322021	23324378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_27914.known	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-23285283	True	NA	NA	False	NA	NA	NA	23286132	23272421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23277188_23285912
transcript_27915.nic	chr14	-	732	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-15	109	0	-109	5prime_fragment	FALSE	canonical	3	61	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	-23285283	True	NA	-7	True	ATTAAA	-20	NA	23286132	23285099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_23285612_23285912
transcript_27918.nnic	chr14	+	1190	12	NNC	ENSG00000129460.16	novel	1108	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	344.921167182079	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	23462773	True	NA	10	True	AATAAA	-19	NA	23469696	23478173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_23469728_23470041_23470102_23470905_23470978_23471067_23471144_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_2792.nic	chr1	-	2218	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	23431	-25	-12871	5prime_fragment	FALSE	canonical	3	99	junction_4	17.2165084516375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGTTGTTGATAGTT	-35767584	True	NA	NA	False	NA	NA	NA	35770003	35759835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_27923.known	chr14	+	1108	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	142.304919099798	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	23462779	True	NA	10	True	AATAAA	-19	NA	23469702	23478173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_27942.known	chr14	+	803	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	189.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCGGGACCAACCTGG	23462765	True	NA	NA	False	NA	NA	NA	23469688	23471609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041_23470102_23470905
transcript_27944.known	chr14	+	270	2	FSM	ENSG00000129460.16	ENST00000557097.5	270	2	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACTCCAAAAAGAAAT	23462775	True	NA	NA	False	NA	NA	NA	23469698	23470282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041
transcript_27954.nic	chr14	-	2627	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_21	87.4608043082696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23567314	False	NA	-16	True	AATAAA	-33	NA	23567532	23559566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
transcript_27955.known	chr14	-	2598	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_21	70.0703566087932	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23564710	True	NA	-16	True	AATAAA	-33	NA	23567791	23559566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_2796.nic	chr1	-	696	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	27880	-25	-17320	5prime_fragment	FALSE	canonical	3	137	junction_2	7.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAACAAAAAACCAGG	-35767584	True	NA	13	True	NA	NA	NA	35770003	35764284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_2798.known	chr1	-	8512	25	FSM	ENSG00000092853.14	ENST00000318121.8	8512	25	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_15	19.2757763930679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTCTGTTTATAAAATG	-35767559	True	NA	-1	True	AATAAA	-18	NA	35769978	35732111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35736607_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_27987.known	chr14	+	535	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGAACTCTGGGTCT	23555929	True	NA	NA	False	NA	NA	NA	23556270	23558859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23556344_23556742_23557040_23558694
transcript_27989.known	chr14	+	1779	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	33.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	23555137	True	NA	8	True	AATATA	-17	NA	23556006	23559574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23556344_23556742_23557305_23558694
transcript_2799.nic	chr1	+	861	5	ISM	ENSG00000126070.20	ENST00000397828.3	1035	6	223	9060	47	0	5prime_fragment	FALSE	canonical	3	93	junction_2	10.6858551365813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	35931188	False	NA	9	True	CATAAA	-18	NA	35931304	35973592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374
transcript_27994.known	chr14	+	571	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCAGTGTCCCTTC	23555967	False	NA	NA	False	NA	NA	NA	23555987	23558909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23556344_23558694
transcript_27995.known	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	23555929	True	NA	NA	False	NA	NA	NA	23556270	23560271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23557305_23558694
transcript_27996.known	chr14	+	339	2	FSM	ENSG00000259431.6	ENST00000556545.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTGGCTGCTTCCTC	23556657	False	NA	NA	False	NA	NA	NA	23556998	23558997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23557035_23558694
transcript_27997.known	chr14	+	1676	9	FSM	ENSG00000100867.15	ENST00000250383.11	1676	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	0.82915619758885	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	23636245	True	NA	6	True	AATAAA	-18	NA	23636363	23645639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644544_23644826_23644883_23645141
transcript_27999.known	chr14	-	2830	4	FSM	ENSG00000215256.5	ENST00000671411.1	2830	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.99382504215469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATTTATTTAGTTT	-23953277	True	NA	-37	True	AATGAA	-24	NA	23954186	23938761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953308_23953420_23953773_23954034_23954124
transcript_28.known	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00071_+_0_600
transcript_2800.known	chr1	+	548	3	FSM	ENSG00000126070.20	ENST00000491443.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	NA	False	NA	9	True	CATAAA	-18	NA	35966954	35973592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35967076_35972023_35972233_35973374
transcript_28000.nnic	chr14	-	585	4	NNC	ENSG00000215256.5	novel	1142	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.56846672960488	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTTATGAACTGTAAGC	-23953283	True	NA	NA	False	AATAAA	-19	NA	23954192	23952985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_23953132_23953308_23953420_23953773_23954034_23954124
transcript_28001.known	chr14	-	2759	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGGCTTCTGAGTTT	NA	False	NA	-15	True	AATAAA	-15	NA	23954204	23938739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953773_23954034_23954124
transcript_28002.known	chr14	-	2903	3	FSM	ENSG00000215256.5	ENST00000671346.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAATCTTTATGGAAT	-23953274	True	NA	-52	True	AATGAA	-9	NA	23954183	23938776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953308_23953420_23953773
transcript_28006.known	chr14	-	2852	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	7	0	-4	0	multi-exon	FALSE	canonical	3	52	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	-23953288	True	NA	-6	True	AATAAA	-24	NA	23954197	23938730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953773
transcript_28007.known	chr14	-	3270	2	FSM	ENSG00000215256.5	ENST00000667602.1	3270	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTGTTTATGGCTTC	-23953257	True	NA	-22	True	AATAAA	-8	NA	23954166	23938746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953308
transcript_2801.known	chr1	+	1490	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.4569664858009	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	36083973	True	NA	2	True	AATAAA	-15	NA	36084093	36088275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_28010.known	chr14	-	1492	2	FSM	ENSG00000215256.5	ENST00000553454.1	1492	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACAAGCCTCACCAAAG	-23953213	True	NA	NA	False	AATAAA	-8	NA	23954122	23940215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953573
transcript_28013.known	chr14	+	1264	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	37.2881772585535	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23951419	True	NA	NA	False	AATAAA	-31	NA	23953769	23969279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_28015.known	chr14	+	1143	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	61.4455495178907	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23951438	True	NA	NA	False	AATAAA	-31	NA	23953788	23969279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_28016.nnic	chr14	+	1174	6	NIC	ENSG00000157326.19	novel	1264	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	71.1348016093389	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951381	True	NA	NA	False	AATAAA	-26	NA	23953731	23969274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_23953917_23955034_23955213_23959901_23960004_23966282_23966418_23967210_23967267_23968756
transcript_28019.known	chr14	+	727	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	58.6190028915539	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCTGCCGTCAAGGT	23951428	True	NA	NA	False	NA	NA	NA	23953778	23969009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
transcript_2802.known	chr1	+	1651	6	FSM	ENSG00000116863.11	ENST00000373178.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	28.175166370405	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	36085867	True	NA	20	True	AATAAA	-20	NA	36088891	36093932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36089116_36091243_36091341_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_28020.nnic	chr14	+	855	4	NNC	ENSG00000157326.19	novel	1340	4	NA	NA	-2	-3156	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	78.3964284900785	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGAGTTTCAATGGTTC	23951381	True	NA	NA	False	TATAAA	-18	NA	23953731	23964967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_23953917_23955034_23955213_23959901_23960004_23964577
transcript_28021.known	chr14	+	785	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	84.0092587489948	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGAGAAGGAACCTGG	23951435	True	NA	NA	False	NA	NA	NA	23953785	23969176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
transcript_28023.known	chr14	+	1258	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	59.2476642095342	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23988584	True	NA	NA	False	AATAAA	-26	NA	23988928	24006403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_28028.known	chr14	+	1117	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	78.0032050623563	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23988473	True	NA	NA	False	AATAAA	-31	NA	23988817	24006408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
transcript_28031.nnic	chr14	+	938	4	NIC	ENSG00000187630.18	novel	1258	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	89.823283296828	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23988545	True	NA	NA	False	AATAAA	-26	NA	23988889	24006403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_23989076_23990181_23990360_24004336_24004393_24005885
transcript_28032.nic	chr14	+	700	2	ISM	ENSG00000187630.18	ENST00000558753.5	556	4	-3	13702	-3	-10387	5prime_fragment	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAGAGTCAAGTCCCT	23988540	True	NA	NA	False	AATAAA	-18	NA	23988884	23990690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_23989076_23990181
transcript_28039.nic	chr14	+	2923	16	NIC	ENSG00000100897.18	novel	4304	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	78	junction_2	95.2615114070502	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24110771	True	NA	16	True	AATAAA	-16	NA	24114794	24124029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24115294_24115381_24115393_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_2804.nic	chr1	+	1067	6	ISM	ENSG00000116871.16	ENST00000373148.5	1797	10	1474	-17	-78	0	3prime_fragment	FALSE	canonical	3	293	junction_1	37.1666517189806	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	36178922	False	NA	15	True	AATAAA	-16	NA	36178942	36180849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_28040.nic	chr14	+	2547	15	NIC	ENSG00000100897.18	novel	2711	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	116.636908255264	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114767	24124029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24114925_24115542_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28042.known	chr14	+	2711	15	FSM	ENSG00000100897.18	ENST00000559115.5	2711	15	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_1	84.2026527770585	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114626	24124029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24114925_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28046.known	chr14	+	4304	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	61.9410516342031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	24110753	True	NA	12	True	AATAAA	-24	NA	24114776	24125242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28053.known	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	27.8159737392335	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087919	True	NA	13	True	NA	NA	NA	24094310	24104125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_28057.nic	chr14	+	2119	9	NIC	ENSG00000100889.12	novel	2433	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	48	junction_8	75.4453444554401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCTGTTTTCATTT	24087888	True	NA	18	True	NA	NA	NA	24094279	24104130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103509
transcript_28058.nnic	chr14	+	1960	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_6	82.996987897152	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087919	True	NA	13	True	NA	NA	NA	24094310	24104125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
transcript_28061.known	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	27.8612634315101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	24094158	24100562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
transcript_28062.known	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	102.973941621467	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24113051	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28065.known	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	243.141543138971	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	24129670	True	NA	24	True	AATAAA	-24	NA	24136226	24138967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
transcript_28069.known	chr14	+	865	10	FSM	ENSG00000092010.15	ENST00000561142.5	865	10	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	679.492966378626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAGAAACAAAGGGAATG	24129640	True	NA	NA	False	NA	NA	NA	24136196	24138787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138264_24138344_24138400_24138473_24138561_24138735
transcript_28075.known	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	28.3460755661167	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140601	False	4372	-10	True	AATAAA	-15	NA	24141585	24138964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
transcript_28079.known	chr14	-	872	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	154.180089505746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140586	False	4372	-10	True	AATAAA	-15	NA	24141570	24138964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
transcript_28086.known	chr14	+	1136	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	38.146242311257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	24129643	True	NA	21	True	AATAAA	-21	NA	24136199	24138964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
transcript_28087.known	chr14	-	838	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	70.7021923281025	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140607	False	4372	-10	True	AATAAA	-15	NA	24141591	24138964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
transcript_2809.known	chr1	-	1056	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	212.927804666277	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-36146462	True	NA	-24	True	AATAAA	-4	NA	36149497	36137053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
transcript_28092.known	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1223	junction_6	162.041229321429	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142238	True	NA	-21	True	AATAAA	-21	NA	24146610	24143364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_28093.known	chr14	-	1502	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_9	502.1080063094	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	-24146251	True	NA	-61	True	AAGAAA	-22	NA	24147235	24143404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
transcript_28099.known	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	507.059277709334	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142233	True	NA	-21	True	AATAAA	-21	NA	24146605	24143364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
transcript_2810.known	chr1	-	951	5	FSM	ENSG00000054116.12	ENST00000373163.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	228.815837520046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTCAAACCATTTTAC	-36146416	True	NA	85	True	GGGGCT	-29	NA	36149451	36136944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149259
transcript_28108.known	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	15.9921855917195	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	24160769	True	NA	10	True	AATAAA	-19	NA	24161264	24166565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
transcript_2811.known	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	35.5598087733891	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	-36146451	True	NA	-2	True	AATAAA	-26	NA	36149486	36136571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
transcript_2812.known	chr1	-	1336	5	FSM	ENSG00000054116.12	ENST00000616395.4	1336	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	215.444888544611	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	-36149494	False	NA	0	True	AATAAA	-28	NA	36149514	36136569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139844_36140068_36140167_36149336
transcript_28120.known	chr14	-	620	10	FSM	ENSG00000100911.16	ENST00000560370.3	620	10	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_8	536.622588482013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTATGTGAGTGTGGA	-24142219	True	NA	NA	False	NA	NA	NA	24146591	24143593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145753_24146207_24146241_24146533
transcript_28121.known	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_25	36.9999839316095	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24180324	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_28122.known	chr14	-	3485	30	FSM	ENSG00000196497.17	ENST00000560155.5	3485	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.6373847972621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTCCCTGAGGCTGG	-24180377	True	NA	-100	True	NA	NA	NA	24188869	24180304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182424_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_28125.known	chr14	+	2405	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	25.2619517255922	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	NA	False	NA	14	True	AAAACA	-20	NA	24171852	24180257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_28131.known	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_12	22.8549505672644	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	24169462	True	NA	11	True	AAAACA	-17	NA	24172079	24180254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_28145.known	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	29.5499576987853	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-24193012	False	NA	-9	True	AATAAA	-16	NA	24195441	24189148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_28152.known	chr14	-	1266	6	FSM	ENSG00000254505.11	ENST00000533523.6	1266	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	266.128089460696	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCTCTTTGATAGCAG	-24213801	False	NA	-94	True	NA	NA	NA	24213830	24209674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213408
transcript_28159.known	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	6.8818602136341	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213600	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
transcript_28166.known	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	59.1370230904465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213599	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
transcript_28171.known	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2074.19845964652	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	-24204037	True	NA	-26	True	AATAAA	-13	NA	24232325	24216865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
transcript_28174.known	chr14	-	578	4	FSM	ENSG00000213920.9	ENST00000533536.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	71.1867653117878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGGCCTAAACTGAA	-24213531	True	NA	-104	True	NA	NA	NA	24215997	24214037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214491_24214600_24215551_24215798_24215887
transcript_28183.known	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	3.39934634239519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213571	True	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
transcript_28184.known	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	3882	junction_3	160.188083895845	4474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204079	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
transcript_28185.known	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	1845.066274028	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204015	True	NA	-17	True	AATAAA	-22	NA	24232303	24216856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
transcript_28188.nic	chr14	+	1730	11	NIC	ENSG00000100938.19	novel	1595	10	NA	NA	0	0	intron_retention	TRUE	canonical	3	8	junction_4	123.777582784606	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230746	True	NA	13	True	AATAAA	-23	NA	24232928	24239242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24232978_24233218_24233341_24233478_24233599_24234106_24234242_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_2819.known	chr1	-	1114	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	260	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	-36149494	False	NA	0	True	AATAAA	-28	NA	36149514	36136569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36149336
transcript_28190.known	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	107.895010697128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	24232229	False	NA	-25	True	AAAAAG	-22	NA	24232635	24239204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28192.known	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	76.5738568674424	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232416	False	NA	13	True	AATAAA	-23	NA	24232441	24239242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28194.known	chr14	+	1972	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	81.6874501142791	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232409	False	NA	13	True	AATAAA	-23	NA	24232421	24239242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28201.known	chr14	+	1595	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	66.159925955741	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230746	True	NA	13	True	AATAAA	-23	NA	24232928	24239242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_2821.known	chr1	-	221	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGGATGAGATTCATC	-36146461	True	NA	NA	False	NA	NA	NA	36149496	36137261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36149336
transcript_28216.nic	chr14	+	1492	9	NIC	ENSG00000100938.19	novel	1595	10	NA	NA	-21	0	intron_retention	FALSE	canonical	3	24	junction_8	108.438634720288	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232828	False	NA	13	True	AATAAA	-23	NA	24232871	24239242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238588
transcript_28217.known	chr14	+	1484	9	FSM	ENSG00000100938.19	ENST00000456667.7	1484	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	113.471362025843	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAGAGATGCTGGGG	24230765	True	NA	5	True	AATAAA	-15	NA	24232947	24239234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28227.known	chr14	+	1864	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	24.2950612265127	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230718	True	NA	13	True	AATAAA	-23	NA	24232900	24239242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28228.known	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	65.1843539509291	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240706	True	NA	-7	True	ATTAAA	-18	NA	24242623	24239642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_2823.known	chr1	+	4405	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	0	0	0	0	multi-exon	FALSE	canonical	1	127	junction_4	113.786301082554	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178141	True	NA	13	True	AATAAA	-24	NA	36224442	36305357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_28230.known	chr14	-	1674	8	FSM	ENSG00000092330.18	ENST00000646753.1	1674	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	74.5922247958861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCCTTGATGTGA	-24240688	True	NA	-11	True	ATTAAA	-14	NA	24242605	24239646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24242140
transcript_28232.nic	chr14	-	1973	8	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_2	60.6333914874082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240746	True	NA	-7	True	ATTAAA	-18	NA	24242663	24239642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_28235.known	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	13.42236938845	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240746	True	NA	-7	True	ATTAAA	-18	NA	24242663	24239642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_28236.known	chr14	-	1874	4	FSM	ENSG00000092330.18	ENST00000558566.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	100.943328435095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	-24240696	True	NA	-46	True	AATGAA	-45	NA	24242613	24239681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24240876_24241674_24241777_24241889_24241995_24242140
transcript_28238.known	chr14	-	885	2	FSM	ENSG00000092330.18	ENST00000559019.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGGGGGAAGGGCT	-24240715	True	NA	NA	False	NA	NA	NA	24242632	24240482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24240876_24242140
transcript_28240.known	chr14	-	1946	17	FSM	ENSG00000100949.15	ENST00000216840.11	1946	17	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_16	21.641612116476	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24270195	True	NA	-2	True	AATAAA	-29	NA	24271597	24265537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
transcript_28244.nic	chr14	-	1460	9	NIC	ENSG00000157379.14	novel	1427	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	20.8382910767654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-24299099	True	NA	-4	True	AATAAA	-20	NA	24299782	24290597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292620_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28245.known	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	9.10957600550102	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-24299097	True	NA	-4	True	AATAAA	-20	NA	24299780	24290597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28250.nnic	chr14	+	601	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	0	-73	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	4.02768199119819	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTTACCTGAAGTTA	24270482	True	NA	18	True	CATAAA	-19	NA	24271200	24298785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_28253.nnic	chr14	+	505	3	NNC	ENSG00000288044.2	novel	355	2	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTAGTATTATAGTTT	24270488	True	NA	83	True	AATAAA	-13	NA	24271206	24298850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_24271311_24292436_24292601_24298613
transcript_28254.known	chr14	+	331	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	12	12	12	-12	multi-exon	FALSE	canonical	3	87	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	24270494	True	NA	79	True	AATAAA	-9	NA	24271212	24298846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24271311_24298613
transcript_28256.known	chr14	+	6045	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.06492357972051	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	24296949	True	NA	4	True	AATAAA	-15	NA	24299849	24309124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
transcript_28257.known	chr14	-	1872	10	FSM	ENSG00000129465.16	ENST00000216274.10	1872	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.955813918560292	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTGAGCTCAGCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	24339991	24336024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24336396_24336884_24336946_24337085_24337461_24337694_24337763_24337872_24338041_24338248_24338296_24338421_24338568_24339014_24339325_24339456_24339598_24339806
transcript_28258.known	chr14	+	3057	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	29.7860684975915	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	24368006	False	NA	28	True	AATAAA	-18	NA	24368019	24378056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
transcript_28259.known	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	13.2748718344933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	24367311	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_28262.nic	chr14	-	1323	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	163.808424691772	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436687	True	NA	-12	True	AATAAA	-19	NA	24442813	24439765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442097_24442261_24442345_24442453_24442753
transcript_28268.known	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	104.542814195907	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436650	True	NA	-12	True	AATAAA	-19	NA	24442776	24439765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
transcript_28270.nic	chr14	-	1337	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	143.27791176591	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	NA	False	NA	-12	True	AATAAA	-19	NA	24442971	24439765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442817
transcript_28277.nic	chr14	-	1328	5	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-37	0	intron_retention	FALSE	canonical	3	142	junction_4	116.043903329731	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436687	True	NA	-12	True	AATAAA	-19	NA	24442813	24439765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442453_24442753
transcript_28279.known	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	176.143939719764	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	-24436639	True	NA	NA	False	NA	NA	NA	24442765	24439901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
transcript_28283.nic	chr14	-	1121	5	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_2	149.853887170136	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436687	True	NA	-12	True	AATAAA	-19	NA	24442813	24439765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345_24442453_24442753
transcript_2829.known	chr1	+	3825	14	FSM	ENSG00000054118.15	ENST00000648638.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	200.219731366323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178131	True	NA	13	True	AATAAA	-24	NA	36224432	36305357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36224506_36225411_36225464_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795_36303832_36304473
transcript_28292.nic	chr14	-	1038	4	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	170.636064964786	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436687	True	NA	-12	True	AATAAA	-19	NA	24442813	24439765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24442345_24442453_24442753
transcript_28297.known	chr14	-	1041	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	155.857484759493	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTCTCACTAACCTT	-24442411	False	107	-28	True	AATAAA	-3	NA	24442448	24439781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
transcript_28298.known	chr14	-	1960	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_2	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTCACTAACCTTGG	-24436650	True	NA	-26	True	AATAAA	-5	NA	24442776	24439779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24441673
transcript_28302.nnic	chr14	+	1912	2	NIC	ENSG00000258744.3	novel	1230	2	NA	NA	-46	665	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATCTTTTAATTGA	24442597	True	NA	15	True	AATAAA	-15	NA	24442963	24446046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24443113_24444283
transcript_28303.nnic	chr14	+	1949	2	FSM	ENSG00000258744.3	ENST00000690491.1	1230	2	-46	-673	-46	673	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAATTGATTTTTCCA	24442597	True	NA	23	True	AATAAA	-23	NA	24442963	24446054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24443142_24444283
transcript_28305.known	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	11.2333209693305	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	-26597430	False	93	-12	True	AATAAA	-16	NA	26597440	26470117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
transcript_28312.nnic	chr14	+	468	4	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-86	-11665	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	0.816496580927726	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	28317811	True	NA	NA	False	ATTAAA	-16	NA	28318054	28406947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_28318246_28318414_28318533_28405425_28405473_28406835
transcript_28313.nnic	chr14	+	660	3	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-109	-11665	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	28317788	True	NA	NA	False	ATTAAA	-16	NA	28318031	28406947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_28318533_28405425_28405473_28406835
transcript_2832.nic	chr1	+	1357	5	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-46	16224	-35	-5036	5prime_fragment	FALSE	canonical	1	127	junction_4	147.04591119783	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGAAAGGGAGCTTC	36178095	True	NA	63	True	GATAAA	-8	NA	36224396	36289133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059
transcript_28320.known	chr14	+	5770	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_7	41.3792810227435	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	30550113	True	NA	-94	True	AATAAA	-17	NA	30559157	30620064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_28332.known	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	104.708781838406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	30550113	True	NA	7	True	AATAAA	-18	NA	30559157	30616669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_28338.nic	chr14	+	1229	11	ISM	ENSG00000092140.16	ENST00000206595.11	5770	15	-39	14499	-39	0	5prime_fragment	FALSE	canonical	3	318	junction_7	43.42303536143	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	30550074	True	NA	NA	False	AATAGA	-17	NA	30559118	30605565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_28344.nic	chr14	+	2035	6	ISM	ENSG00000092140.16	ENST00000648008.1	4126	16	-103	23237	-39	1349	5prime_fragment	TRUE	canonical	3	398	junction_4	20.4606940253746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGTGC	30550074	True	NA	NA	False	AATACA	-14	NA	30559118	30594988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473
transcript_2835.nnic	chr1	+	1239	4	NIC	ENSG00000054118.15	novel	4405	12	NA	NA	-20	-5036	combination_of_known_splicesites	FALSE	canonical	1	43	junction_1	191.191003972467	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGAAAGGGAGCTTC	36178110	True	NA	63	True	GATAAA	-8	NA	36224411	36289133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_36224506_36282532_36282701_36286367_36287271_36289059
transcript_28353.known	chr14	+	2190	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	56.2723875201881	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	30612523	True	NA	NA	False	GATAAA	-23	NA	30622318	30735850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28354.known	chr14	+	3589	25	FSM	ENSG00000092108.22	ENST00000676473.1	3589	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	167.838939826913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	30612534	True	NA	NA	False	TATAAA	-38	NA	30622329	30737192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30643879_30644019_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28357.known	chr14	+	2171	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	147.39513692415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612526	True	NA	NA	False	NA	NA	NA	30622321	30735774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28360.known	chr14	+	2049	24	FSM	ENSG00000092108.22	ENST00000679102.1	2049	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	115.417922292811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30735774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28361.known	chr14	+	1943	24	FSM	ENSG00000092108.22	ENST00000463622.6	1943	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	116.915396034345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAACAGTGTCCTA	30612523	True	NA	81	True	GATAAA	-39	NA	30622318	30735692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28363.known	chr14	+	2058	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	101.629093225277	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	30612523	True	NA	NA	False	ATTAAA	-12	NA	30622318	30735789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28367.known	chr14	+	3296	22	FSM	ENSG00000092108.22	ENST00000678716.1	3296	22	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	120.76828885033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	30612508	True	NA	NA	False	TATAAA	-38	NA	30622303	30737192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28378.nnic	chr14	+	1130	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2862	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	148.30764317726	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	30690324	30735799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_30690578_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28379.nnic	chr14	+	1025	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2842	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	162.024944513578	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	30690290	True	NA	NA	False	AATAAA	-2	NA	30690344	30735799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_30690493_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28380.known	chr14	+	4736	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	122.388112167808	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTCCTGTCTTAGAA	30612519	True	NA	NA	False	NA	NA	NA	30622314	30661939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
transcript_28386.known	chr14	+	425	1	FSM	ENSG00000213867.4	ENST00000468034.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTTTTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	30821418	30821843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30821400_30821800
transcript_28390.known	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	19.197968212055	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_28394.known	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	14.624978632463	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_28396.known	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	7.38647412504775	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	31025335	True	NA	9	True	AATAAA	-24	NA	31025648	31096450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
transcript_28398.known	chr14	+	1608	6	FSM	ENSG00000100478.16	ENST00000554345.6	1608	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	14.0342438342791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTTGTATTTTATAA	31025337	True	NA	NA	False	AATAAA	-22	NA	31025650	31085802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080645_31084768
transcript_28399.known	chr14	-	9080	43	FSM	ENSG00000092148.14	ENST00000553700.5	9080	43	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_42	53.2806978786869	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGTGTCATGTGAC	-31203572	True	NA	-4	True	ATTAAA	-14	NA	31207804	31100117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_2840.nnic	chr1	+	1690	2	NIC	ENSG00000214193.11	novel	2387	6	NA	NA	941	-46	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGTCCTTATTAAT	36321230	True	NA	16	True	ATTAAA	-13	NA	36321544	36329175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_36321779_36327719
transcript_28400.known	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	-31419253	True	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31400513_31402849_31403050_31420471
transcript_28402.known	chr14	-	749	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	0	0	0	multi-exon	FALSE	non_canonical	1	4	junction_1	19.6129209111409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	-31455153	True	NA	-37	True	NA	NA	NA	31457376	31427506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
transcript_28403.nic	chr14	-	580	4	NIC	ENSG00000203546.7	novel	749	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	non_canonical	1	4	junction_1	18.6964048831735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	-31455238	True	NA	-37	True	NA	NA	NA	31457461	31427506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_31427793_31428143_31428189_31453274_31453345_31457282
transcript_28404.nic	chr14	-	2317	2	ISM	ENSG00000129480.13	ENST00000549850.1	823	3	27	3299	27	-3299	5prime_fragment	FALSE	canonical	3	50	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGAGAGAGAGGCCAGG	-31455238	True	NA	NA	False	AAAAAG	-1	NA	31457461	31451460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_31453345_31457028
transcript_28405.known	chr14	+	3040	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	10.6249705881946	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATATCTGAACTGAAA	31560454	True	NA	22	True	AATAAA	-24	NA	31561403	31861224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
transcript_2841.known	chr1	-	860	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTCTAAGTGTCTCCA	-36393165	True	NA	-26	True	ATTAAA	-15	NA	36397908	36393435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36394154_36397766
transcript_28416.known	chr14	-	1304	1	FSM	ENSG00000286527.1	ENST00000670017.1	1304	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTAACGCCCTGTCT	-32201726	True	NA	NA	False	AATAAA	-16	NA	32201736	32200432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_32200400_32201700
transcript_28417.known	chr14	-	107	1	FSM	ENSG00000202337.1	ENST00000365467.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGTCTGTCAAGATCATT	NA	False	NA	-66	True	NA	NA	NA	32203269	32203162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_32203200_32203300
transcript_28418.known	chr14	-	2706	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	5.76085931090146	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCATTCTAATGGTTTGA	-33948377	True	NA	-9	True	AATAAA	-15	NA	33951074	33924226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
transcript_28419.known	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	30.7774267930248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	-33948129	False	NA	NA	False	NA	NA	NA	33950826	33925398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
transcript_2842.known	chr1	-	1455	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.44623609317129	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCATTTTATTCTTA	-36450292	True	NA	1	True	AATATA	-20	NA	36450451	36417905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_28422.known	chr14	-	2662	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	0	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGATTATTTGAGCCT	-34448437	True	NA	NA	False	ATTAAA	-23	NA	34462240	34432787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34435305_34462095
transcript_28426.known	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	33.9682204420544	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-34535175	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_28428.nic	chr14	-	1451	6	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	76	-72	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	151.390092146085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTCTGAGTGTTAT	-34535096	True	NA	-16	True	ATTAAA	-38	NA	34539622	34516009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539255
transcript_2843.known	chr1	-	989	9	FSM	ENSG00000116885.18	ENST00000445843.7	989	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.60807714779169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGCTAGTTTTCTAC	-36450239	False	NA	NA	False	NA	NA	NA	36450279	36418059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36418256_36418990_36419055_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_28433.known	chr14	-	841	4	FSM	ENSG00000129518.10	ENST00000555705.1	841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	185.982675417781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTTAAAGTTAATATT	-34535172	True	NA	NA	False	AAAAAG	-43	NA	34539698	34529355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539255
transcript_28434.nic	chr14	-	537	4	ISM	ENSG00000129518.10	ENST00000250454.8	1303	6	-90	13516	-87	-98	5prime_fragment	FALSE	canonical	3	351	junction_2	33.5360502544153	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAACAACACAAGATTC	NA	False	NA	NA	False	AAGAAA	-6	NA	34539791	34529453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539554
transcript_28436.nic	chr14	-	515	3	ISM	ENSG00000129518.10	ENST00000250454.8	1303	6	-90	17506	-87	2420	5prime_fragment	FALSE	canonical	3	351	junction_1	32.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAACCTATTTACCAG	NA	False	NA	NA	False	NA	NA	NA	34539791	34533443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_34533540_34536093_34536276_34539554
transcript_28437.known	chr14	-	562	2	FSM	ENSG00000129518.10	ENST00000555683.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTGGCATGATCATAG	-34535178	True	NA	NA	False	NA	NA	NA	34539704	34535863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34536276_34539554
transcript_28438.known	chr14	+	671	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGTAAATGTTAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	34541043	34541714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34541000_34541700
transcript_28439.known	chr14	-	164	1	FSM	ENSG00000206588.1	ENST00000383861.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34556389	34556225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34556200_34556400
transcript_28441.known	chr14	-	2975	14	FSM	ENSG00000129515.20	ENST00000652385.1	2975	14	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_13	99.8392198611608	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAAATGCTGTGTA	-34623223	True	NA	NA	False	AATAAA	-20	NA	34630160	34561411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_2845.known	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.43705983732471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-36450284	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_28455.known	chr14	-	4306	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	21.6999743983464	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGATCATTGAACCTCT	-34713052	True	NA	NA	False	ATTAAA	-21	NA	34714593	34709112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
transcript_28456.known	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.3220847251731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-34713036	True	NA	NA	False	NA	NA	NA	34714577	34712036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
transcript_28457.known	chr14	-	1387	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	55.7155474012615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	-34714795	False	NA	NA	False	AATAAA	-21	NA	34714823	34712007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
transcript_28461.nic	chr14	-	2628	17	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-41	27385	-41	0	5prime_fragment	FALSE	canonical	1	24	junction_6	21.3913497411921	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTCTGAAATATATTGA	NA	False	NA	-35	True	AATAAA	-17	NA	34875401	34780115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_28464.nic	chr14	-	2366	16	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-41	30455	-41	710	5prime_fragment	FALSE	canonical	1	24	junction_5	20.7261509531638	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAGAGAAACAAGAAAAA	NA	False	NA	40	True	AAGAAA	-25	NA	34875401	34783185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_28467.known	chr14	-	5920	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	0	0	0	0	multi-exon	TRUE	canonical	1	24	junction_15	22.784205055257	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAATTCTCTAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	34875647	34752730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_28469.nnic	chr14	-	1312	8	NIC	ENSG00000198604.11	novel	5920	26	NA	NA	-41	10682	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	33.5832805826631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAGAGGCTTAA	NA	False	NA	-31	True	ACTAAA	-8	NA	34875401	34800259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_28472.nnic	chr14	-	1310	9	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-19	47611	-19	10600	5prime_fragment	FALSE	canonical	3	63	junction_8	12.6682427747498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAGAAAAAGAAG	-34875361	True	NA	-38	True	ATTAAA	-28	NA	34875379	34800341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_28479.known	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_11	48.5708646092376	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	34973689	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28480.known	chr14	+	2253	16	FSM	ENSG00000100883.13	ENST00000678963.1	2253	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	179.561861825451	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982328	True	NA	25	True	AATAAA	-10	NA	34982700	35029554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983004_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28481.known	chr14	+	2304	15	FSM	ENSG00000100883.13	ENST00000555746.6	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_13	177.02962971186	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982318	True	NA	25	True	AATAAA	-10	NA	34982690	35029554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35028087_35028184_35029060
transcript_28482.known	chr14	+	2045	15	FSM	ENSG00000100883.13	ENST00000678477.1	2045	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	183.631396541872	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	34973668	True	NA	24	True	AATAAA	-9	NA	34982970	35029553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28483.known	chr14	+	2107	15	FSM	ENSG00000100883.13	ENST00000678519.1	2107	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	185.069553940994	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	34973670	True	NA	24	True	AATAAA	-9	NA	34982972	35029553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28484.known	chr14	+	2306	14	FSM	ENSG00000100883.13	ENST00000546080.6	2306	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	192.541918897014	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	34982309	True	NA	24	True	AATAAA	-9	NA	34982681	35029553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28487.known	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-34982209	True	NA	NA	False	NA	NA	NA	34982532	34963707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34964041_34969169_34969308_34982423
transcript_28489.known	chr14	+	6118	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	87.0314438707196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	35118495	True	NA	7	True	AATAAA	-21	NA	35122563	35277614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28491.known	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	103.215658803411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	35118653	False	NA	-36	True	NA	NA	NA	35122721	35274017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28495.known	chr14	+	789	6	FSM	ENSG00000100890.16	ENST00000557404.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.902502246309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATGATGAAGACTT	35122735	False	NA	NA	False	NA	NA	NA	35122758	35273485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28501.nic	chr14	-	2146	14	NIC	ENSG00000092020.11	novel	1511	13	NA	NA	-228	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_13	60.5876547270601	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	NA	False	NA	-2	True	AATAAA	-26	NA	35122745	35085471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_28506.known	chr14	-	1719	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	90.8625335328044	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTGGTTACTG	-35122425	False	NA	-3	True	AATAAA	-25	NA	35122447	35085472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_2851.known	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	57.7057985273011	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-36443054	True	NA	25	True	GGGGCT	-15	NA	36464384	36455717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
transcript_28512.known	chr14	-	1402	12	FSM	ENSG00000092020.11	ENST00000553273.5	1402	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	121.955146882941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	-35122239	False	NA	3	True	AATAAA	-31	NA	35122261	35085466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_28519.known	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	144.22205101856	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	35041806	True	NA	NA	False	NA	NA	NA	35046377	35081387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_28524.known	chr14	+	3053	5	FSM	ENSG00000151327.13	ENST00000280987.9	3053	5	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	16.1148223694833	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	35045621	True	NA	10	True	TATAAA	-17	NA	35046271	35083378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_28545.nic	chr14	+	579	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35045665	False	NA	9	True	AATAAA	-27	NA	35046315	35050396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_35046407_35046504_35046629_35050032
transcript_28547.known	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35046354	False	NA	9	True	AATAAA	-27	NA	35046452	35050396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35046629_35050032
transcript_28549.known	chr14	-	1511	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_12	31.1644384230203	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-35120453	True	NA	-2	True	AATAAA	-26	NA	35121990	35085471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_28550.known	chr14	+	3857	15	FSM	ENSG00000258790.1	ENST00000557565.1	3857	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1140.50313816458	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	35118480	True	NA	NA	False	AATAAA	-22	NA	35122548	35317474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122636_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434_35274292_35278552_35278719_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_28556.known	chr14	+	879	7	FSM	ENSG00000100902.11	ENST00000553809.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	935.425393426256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTTTGGTAACAACAAA	35266591	True	NA	NA	False	ACTAAA	-41	NA	35292397	35317347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312862_35313060_35314360_35314456_35317248
transcript_28558.known	chr14	+	1023	7	FSM	ENSG00000100902.11	ENST00000261479.9	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	2380	junction_5	135.980901436766	3485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	35266575	True	NA	NA	False	AATAAA	-41	NA	35292381	35317493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_28570.known	chr14	+	925	6	FSM	ENSG00000100902.11	ENST00000554541.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1035.97247067671	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	35266542	True	NA	NA	False	AATAAA	-5	NA	35292348	35317457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_28571.known	chr14	+	655	4	FSM	ENSG00000100902.11	ENST00000554843.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	59.269628722381	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCACAACAGTATGTCG	35266581	True	NA	NA	False	AATAAA	-17	NA	35292387	35311052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739
transcript_28573.known	chr14	+	601	2	FSM	ENSG00000100902.11	ENST00000556167.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAAAGAATT	35266588	True	NA	NA	False	AAAAAG	-4	NA	35292394	35308436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993
transcript_28575.known	chr14	-	1559	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	19.5959179422654	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	-35403152	True	NA	-14	True	ATTAAA	-15	NA	35404749	35401512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_28577.known	chr14	-	1537	5	FSM	ENSG00000100906.11	ENST00000557389.1	1537	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	17.3205080756888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTATATTTATTAAACA	-35404090	False	NA	-2	True	NA	NA	NA	35404140	35401544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689
transcript_28579.nnic	chr14	+	1410	11	NNC	ENSG00000100916.14	novel	1544	11	NA	NA	35	-192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.713290752364	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACGTTGATTTGCCTC	35824718	True	NA	17	True	AATAAA	-14	NA	35826372	35870668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_35826659_35830963_35831067_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_28580.known	chr14	+	1544	11	FSM	ENSG00000100916.14	ENST00000552677.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	63.9240956134696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGGCCGATAGAATGT	35824786	True	NA	NA	False	TTTAAA	-36	NA	35826440	35870860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35826659_35829794_35829908_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_28584.nnic	chr14	+	2605	10	NNC	ENSG00000100916.14	novel	2637	10	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	49.3771077062245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	35824736	True	NA	3	True	AATAAA	-20	NA	35826390	35871963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867884_35868033_35870359
transcript_28585.known	chr14	+	2637	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_6	11.255725566337	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	35824683	True	NA	3	True	AATAAA	-20	NA	35826337	35871963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_28596.known	chr14	-	1586	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	94.8248385181857	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCCTTTGACGGTGTG	-36316124	True	NA	-12	True	AATAAA	-14	NA	36320627	36298567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28605.known	chr14	-	1449	8	FSM	ENSG00000151332.20	ENST00000359527.11	1449	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	117.246295794584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAACAATAGATCCA	-36316104	True	NA	-34	True	NA	NA	NA	36320607	36298589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_36299191_36300784_36300824_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28609.known	chr14	-	952	7	FSM	ENSG00000151332.20	ENST00000605579.5	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_3	31.831588084794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATCTATAAGCAAAACA	-36316074	True	NA	NA	False	AATGAA	-44	NA	36320577	36308016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28611.known	chr14	-	1809	10	NNC	ENSG00000151332.20	novel	1603	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.363328604114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGACGGTGTGACT	-36316121	True	NA	-9	True	AATAAA	-17	NA	36320624	36298564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_36299191_36300784_36300827_36305088_36305306_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28617.known	chr14	+	1924	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGAAAATGTTTACC	37171874	False	NA	24	True	AATAAA	-36	NA	37171887	37173811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_37171900_37173800
transcript_28619.known	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.55965126804031	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	37196854	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_28631.nnic	chr14	+	1193	5	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.5998466254061	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38193240_38193324_38196740_38196991_38199045_38199512_38202781
transcript_28635.nnic	chr14	+	943	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	14.2672897060218	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
transcript_28639.nnic	chr14	+	999	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	26.1448954015034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185363	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202781
transcript_28641.nnic	chr14	+	1109	4	NNC	ENSG00000258649.2	novel	859	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1350936571711	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185363	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38196740_38196991_38199045_38199512_38202781
transcript_28642.nnic	chr14	+	936	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	-77	0	-77	0	multi-exon	FALSE	canonical	3	30	junction_1	27	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38190889	False	NA	18	True	AATAAA	-26	NA	38190905	38202925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_38191232_38199045_38199512_38202781
transcript_28647.known	chr14	+	531	3	FSM	ENSG00000258649.2	ENST00000555655.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	38185363	True	NA	16	True	AATAAA	-24	NA	38190982	38202923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_38191232_38193183_38193324_38202781
transcript_28648.nnic	chr14	+	1052	2	NNC	ENSG00000258649.2	novel	531	3	NA	NA	0	-5380	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAAAATTTCATATGTG	38185363	True	NA	NA	False	AGTAAA	-33	NA	38190982	38197543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38196740
transcript_28649.nnic	chr14	-	3920	21	NNC	ENSG00000100934.15	novel	3843	20	NA	NA	3	0	intron_retention	TRUE	canonical	0	0	junction_5	183.245156825494	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-39097054	True	NA	-15	True	AATAAA	-18	NA	39103240	39031918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39047366_39047439_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_28651.known	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_15	58.860226943068	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-39097049	True	NA	-15	True	AATAAA	-18	NA	39103235	39031918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_28653.known	chr14	+	1476	11	FSM	ENSG00000092208.19	ENST00000525153.6	1476	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	165.047750666284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	39110300	True	NA	4	True	AATAAA	-22	NA	39114284	39136973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39121906_39122025_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_28657.known	chr14	+	1320	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_5	29.3030146344479	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	39110338	True	NA	4	True	AATAAA	-22	NA	39114322	39136973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_28659.known	chr14	+	825	10	FSM	ENSG00000092208.19	ENST00000412033.7	825	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	125.825668150152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCAATTCAAGTACAG	39110321	True	NA	NA	False	NA	NA	NA	39114305	39136541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114396_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_28663.known	chr14	+	801	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	121.828709157571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGAAGATATTTCTCAT	39110321	True	NA	NA	False	NA	NA	NA	39114305	39136496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
transcript_28668.known	chr14	+	1094	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	122.823043440553	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	39110321	True	NA	26	True	NA	NA	NA	39114305	39136775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_2868.nnic	chr1	-	748	5	NIC	ENSG00000116898.12	novel	953	8	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_3	746.033636976243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGTCTTGAAGAATG	NA	False	NA	-29	True	AATAAA	-16	NA	36464443	36455771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_36455926_36456186_36456379_36457922_36457982_36463805_36463851_36464145
transcript_28686.known	chr14	-	3251	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	12.1095004025765	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTCGTGATTTTGT	-39167257	True	NA	-5	True	AATAAA	-19	NA	39170333	39147813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
transcript_28688.known	chr14	-	1000	6	FSM	ENSG00000182400.15	ENST00000555269.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	44.8972159493214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCTTATTTTAAACC	-39167277	True	NA	50	True	AATGAA	-33	NA	39170353	39150117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159449_39159551_39170014
transcript_28691.known	chr14	-	3229	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	42.0535373066286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCGTGATTTTGTGG	-39167317	True	NA	-3	True	AATAAA	-21	NA	39170393	39147811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
transcript_28696.known	chr14	+	3537	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_8	42.3170695464608	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	39165496	True	NA	5	True	ATTAAA	-15	NA	39175253	39183220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
transcript_2870.known	chr1	-	1395	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	21	3	1	0	multi-exon	FALSE	canonical	2	4	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-37474330	True	NA	-5	True	AATAAA	-17	NA	37474411	37454878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37455913_37456366_37456460_37474143
transcript_28700.nic	chr14	+	2566	24	NIC	ENSG00000150527.18	novel	3860	24	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	26.5687395373758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGAGTAAATTATTTC	39264643	True	NA	NA	False	AATAAA	-18	NA	39267357	39350423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_28702.known	chr14	+	3860	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_18	17.0667542924657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACTAAAAAGAAA	39267114	False	NA	NA	False	AAAACA	-4	NA	39267145	39351395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_28706.known	chr14	+	2762	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_18	19.1583764559984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	39264699	True	NA	19	True	AATAAA	-20	NA	39267413	39350694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_28708.known	chr14	+	2526	24	FSM	ENSG00000150527.18	ENST00000556148.5	2526	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	34.1810480437423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTATGAGTAAATTATT	39264696	True	NA	NA	False	AATAAA	-16	NA	39267410	39350421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291112_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_2871.known	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.75704873412037	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	37474021	True	NA	14	True	AATAAA	-26	NA	37474579	37484377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
transcript_28712.known	chr14	-	869	3	FSM	ENSG00000286123.1	ENST00000652631.1	869	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTTTATTTTAATAAA	-40348312	False	NA	NA	False	AATAAA	-20	NA	40348331	40267282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_40267565_40286815_40286951_40347879
transcript_2872.known	chr1	-	1351	9	FSM	ENSG00000163875.16	ENST00000487788.5	1351	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	180.837461550421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAATGGAAAAACATAA	-37510692	True	NA	-112	True	NA	NA	NA	37514732	37493397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_28723.nnic	chr14	+	676	5	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-223	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	66.7083203206317	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	40954444	False	NA	-1	True	AATAAA	-11	NA	40954469	41149309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954677_40954822_40954953_40962789_40962843_40974339_40974391_41149074
transcript_28724.known	chr14	+	696	4	FSM	ENSG00000251363.3	ENST00000515218.2	696	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	74.5534856477028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACAACTTGCTGATAG	40953338	False	NA	NA	False	AATAAA	-35	NA	40954897	40975877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_40975340
transcript_28727.nnic	chr14	+	774	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-258	-42861	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	67.0721005088305	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCTTCTCAATGACT	NA	False	NA	NA	False	AATAAA	-3	NA	40954434	41106448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41106296
transcript_28728.nnic	chr14	+	843	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-258	-8255	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	51.6978400580398	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	NA	False	NA	0	True	AATAAA	-22	NA	40954434	41141054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_28730.known	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	46.5999523128034	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	40953133	True	NA	-1	True	AATAAA	-11	NA	40954692	41149309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
transcript_28731.nnic	chr14	+	751	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-169	-8255	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	82.0243866176395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	40954140	True	NA	0	True	AATAAA	-22	NA	40954523	41141054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954953_40962789_40962843_41078586_41078635_41140833
transcript_28733.nnic	chr14	+	710	3	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-176	-8255	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	88	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	40954133	True	NA	0	True	AATAAA	-22	NA	40954516	41141054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954953_40962789_40962843_41140833
transcript_28734.known	chr14	-	530	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATATCCCATTAAAAAGT	-41604839	False	NA	NA	False	AATAAA	-7	NA	41604856	41587860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_41588288_41604753
transcript_28735.known	chr14	+	2935	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	6.05702071979286	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	44896609	True	NA	17	True	AATAAA	-30	NA	44897274	44907257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
transcript_28737.known	chr14	-	360	3	FSM	ENSG00000258949.1	ENST00000555157.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTGTGTAAGAAACT	-44911850	False	NA	NA	False	AATAAA	-17	NA	44911863	44898907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_44899077_44899229_44899314_44911756
transcript_28739.known	chr14	-	6522	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.35607132140714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATATGTCATATGAT	-44960051	True	NA	-13	True	AATAAA	-14	NA	44961947	44924323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
transcript_2874.known	chr1	-	1408	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	145.724649491388	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTCACAGGCTT	-37510716	True	NA	-49	True	TTTAAA	-37	NA	37514756	37493334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_28742.nic	chr14	-	2016	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-19	9239	1	-4750	5prime_fragment	FALSE	canonical	3	21	junction_1	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTATGAAGTAACTAG	-44960070	True	NA	-29	True	AATAAA	-22	NA	44961966	44933562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_28743.nic	chr14	-	1830	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-19	9425	1	-4936	5prime_fragment	FALSE	canonical	3	21	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTGTGTCTATACAAT	-44960070	True	NA	NA	False	AATAAA	-16	NA	44961966	44933748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_28744.nnic	chr14	-	1143	3	NNC	ENSG00000179454.14	novel	847	3	NA	NA	1	7543	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	9	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTAGTATTC	-44960070	True	NA	NA	False	AATAAA	-18	NA	44961966	44937689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_44937813_44945029_44945929_44961845
transcript_28752.known	chr14	+	3174	15	FSM	ENSG00000185246.18	ENST00000424478.5	3174	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	92.8042706617601	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	45080390	True	NA	16	True	AATAAA	-21	NA	45084127	45115601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_28756.known	chr14	+	3532	14	FSM	ENSG00000185246.18	ENST00000355765.11	3532	14	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	51.6275922741287	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	45080378	True	NA	NA	False	NA	NA	NA	45084115	45116282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_2876.known	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	34.3834585552737	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-37510726	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_28761.known	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2472	junction_2	138.357929540257	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-45116203	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
transcript_28769.known	chr14	-	1684	8	FSM	ENSG00000100442.11	ENST00000216330.7	1684	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	941.485409079824	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATGAGTCTTCCGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	45135319	45115599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348_45134807_45135258
transcript_28770.known	chr14	+	645	2	FSM	ENSG00000185246.18	ENST00000556782.5	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTGTAGAGAGTCAGT	45080380	True	NA	-93	True	NA	NA	NA	45084117	45095733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_45084250_45095220
transcript_28771.known	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_14	45.4549485067358	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	-45245395	True	NA	-11	True	AATAAA	-21	NA	45253202	45203189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_28781.known	chr14	-	1950	8	FSM	ENSG00000129534.14	ENST00000627697.1	1950	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	100.666959498605	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTGTCTCAGCCTCCC	-45253380	False	NA	NA	False	NA	NA	NA	45253402	45232572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_28783.nnic	chr14	-	2992	13	NNC	ENSG00000139915.21	novel	5110	16	NA	NA	24736	157	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	4.0095372412398	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-44	NA	47107102	46841627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_46842020_46845765_46845872_46855023_46855155_46873432_46873592_46874044_46874201_46877488_46877510_46882043_46882222_46920011_46920161_46957373_46957644_47035010_47035305_47061248_47061579_47096853_47097124_47106566
transcript_28786.nnic	chr14	-	2061	4	NNC	ENSG00000139915.21	novel	5110	16	NA	NA	25114	1187	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTTTGTAACTCAGGA	-47106157	True	NA	NA	False	AATAAA	-18	NA	47106724	47034001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_47035305_47061248_47061579_47096853_47097124_47106566
transcript_28787.nnic	chr14	+	778	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	68	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGTCTGTTTGGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	47104572	47108723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_+_47104830_47106630_47106733_47108304
transcript_2879.known	chr1	-	603	6	FSM	ENSG00000163875.16	ENST00000373073.8	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	149.693820847756	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAATGTTCTCTGGTTT	-37510723	True	NA	NA	False	NA	NA	NA	37514763	37493761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37493815_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_28794.nnic	chr14	-	1103	4	Fusion	ENSG00000289195.1_ENSG00000287492.1	novel	923	3	NA	NA	-2352	-1	multi-exon	FALSE	canonical	2	4	junction_2	176.677358167052	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAACTGTATGTCTGAT	-48267804	False	NA	-7	True	AATAAA	-18	NA	48267961	48233743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr14_-_48234227_48235430_48235619_48265560_48265755_48267723
transcript_28797.nnic	chr14	-	1526	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2470	513	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTTTCTTTAGCACT	-48267922	True	NA	1	True	AATAAA	-18	NA	48268079	48261507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_28798.nnic	chr14	-	1265	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2470	252	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCCTAAATCTTGC	-48267922	True	NA	-11	True	ATTAAA	-19	NA	48268079	48261768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_28800.nnic	chr14	-	598	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2470	-415	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTAGTCT	-48267922	True	NA	-2	True	AATAAA	-18	NA	48268079	48262435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_28804.known	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	96.858430482615	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	49592057	True	NA	10	True	ATTAAA	-17	NA	49598939	49614672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
transcript_28809.known	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	128.5	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	49598746	False	NA	8	True	ATTAAA	-15	NA	49598760	49614670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49599204_49602369_49602469_49614255
transcript_28810.known	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	11584.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	-49559448	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49577854_49585949_49586050_49586284
transcript_28813.known	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	2690.5	31067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-49559452	True	NA	-33	True	AATAAA	-15	NA	49586380	49583576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49583676_49585949_49586050_49586284
transcript_28815.known	chr14	-	333	3	FSM	ENSG00000213741.11	ENST00000557519.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGTTTTTTTTTTTTT	-49559397	False	NA	NA	False	AATATA	-16	NA	49586325	49585389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49585582_49585949_49586050_49586284
transcript_28816.known	chr14	+	299	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	49576213	True	NA	10	True	NA	NA	NA	49586579	49586878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49586600_49586900
transcript_28817.known	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	-49559423	True	NA	-35	True	AATAAA	-13	NA	49586351	49583578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49583676_49585949
transcript_28818.known	chr14	-	488	3	FSM	ENSG00000213741.11	ENST00000557111.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8942	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	-49598676	False	NA	-35	True	AATAAA	-13	NA	49598690	49583578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49583676_49585949_49586050_49598399
transcript_2882.known	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	180.676506497109	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-37510723	True	NA	-3	True	AATAAA	-18	NA	37514763	37492574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_28820.known	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	5859	junction_1	0	6165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-49559862	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49619141_49620561
transcript_28823.known	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	20.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635192	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49626049_49628011_49628156_49633286
transcript_28824.known	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635178	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49626049_49633286
transcript_28828.known	chr14	-	1692	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.1366373451785	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-49687433	True	NA	-13	True	AATAAA	-17	NA	49688214	49643554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_2883.known	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.64279609239471	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-37552378	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
transcript_28830.known	chr14	-	1792	18	FSM	ENSG00000100479.13	ENST00000539565.6	1792	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	19.596624241458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTACAATAAAATTATG	NA	False	NA	-43	True	AAGAAA	-43	NA	49688422	49643584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
transcript_28839.known	chr14	-	496	3	FSM	ENSG00000100479.13	ENST00000553805.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGTTGATCTGACTTTT	-49687422	True	NA	50	True	NA	NA	NA	49688203	49679473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49679801_49683592_49683694_49688135
transcript_28841.known	chr14	-	5819	33	FSM	ENSG00000165525.18	ENST00000298310.10	5819	33	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_17	22.5927774686956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTAGTATATGCCTTC	-49845767	False	7021	-4	True	AATAAA	-13	NA	49852788	49782082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_28856.nic	chr14	-	1627	14	NIC	ENSG00000165525.18	novel	5819	33	NA	NA	-262	-110	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	50.1062775832973	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGAAAAAACAAAA	-49846062	False	NA	NA	False	AATGAA	-16	NA	49853083	49828722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_49828788_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_28858.nnic	chr14	-	1357	14	NNC	ENSG00000165525.18	novel	5819	33	NA	NA	-1	-110	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	52.1373924578866	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGAAAAAACAAAA	-49845801	False	7021	NA	False	AATGAA	-16	NA	49852822	49828722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833468_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_28861.nic	chr14	-	1647	14	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-295	46640	-262	-110	5prime_fragment	FALSE	canonical	3	178	junction_1	17.4701774630859	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGAAAAAACAAAA	-49846062	False	NA	NA	False	AATGAA	-16	NA	49853083	49828722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_28867.nic	chr14	-	1326	13	NIC	ENSG00000165525.18	novel	5819	33	NA	NA	-15	-110	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	47.4771875044566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGAAAAAACAAAA	-49845815	False	7021	NA	False	AATGAA	-16	NA	49852836	49828722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_28875.known	chr14	-	590	4	FSM	ENSG00000165525.18	ENST00000556672.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	19.9053315024448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTTATCTGTAGGTCT	-49845800	False	7021	NA	False	AATAAA	-23	NA	49852821	49845974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49846266_49851562_49851666_49851806_49851876_49852694
transcript_28876.known	chr14	-	300	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	-49855828	True	NA	-2	True	NA	NA	NA	49862849	49862549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49862500_49862800
transcript_28881.known	chr14	-	1772	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	22.3015694514982	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-50115051	True	NA	-7	True	AATAAA	-15	NA	50116572	50108636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_28882.known	chr14	-	1793	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	19.8131269616888	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTGAATTTCAGAAA	-50115079	True	NA	-3	True	AATAAA	-19	NA	50116600	50108632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_28885.known	chr14	-	795	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	33.1087224157019	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAAAATTCCTGCTTG	-50115079	True	NA	NA	False	GGGGCT	-8	NA	50116600	50109536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_28887.nic	chr14	-	1701	5	NIC	ENSG00000100483.14	novel	1793	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	31.6810274454602	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-50115096	False	NA	-7	True	AATAAA	-15	NA	50116617	50108636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_50109714_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_28888.known	chr14	-	1849	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	19.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTGTGACTGTGAA	-50115037	True	NA	-12	True	AATAAA	-10	NA	50116558	50108641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
transcript_28895.known	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.54986910905066	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-50309652	True	NA	-107	True	AATACA	-18	NA	50312229	50245650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_28900.known	chr14	-	6095	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	8.5764535535124	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTGTCCCTGGGAT	-50309652	True	NA	-5	True	ATTAAA	-16	NA	50312229	50242433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_28906.known	chr14	+	2944	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	64.8320908192849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311106	True	NA	13	True	AATAAA	-25	NA	50312323	50327957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_2891.known	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_9	51.119207088269	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	-37589626	True	NA	-38	True	ATTAAA	-18	NA	37595937	37566815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_28911.known	chr14	+	2908	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	35.2526594741446	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311106	True	NA	13	True	AATAAA	-25	NA	50312323	50327957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_28918.nic	chr14	+	776	5	ISM	ENSG00000125375.18	ENST00000557421.7	2944	6	-6	3666	-6	0	5prime_fragment	FALSE	canonical	3	45	junction_1	72.4499827467198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTGTATTGAATTTT	50311100	True	NA	NA	False	AATACA	-1	NA	50312317	50324291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944
transcript_28923.nic	chr14	+	531	4	NIC	ENSG00000125375.18	novel	2908	5	NA	NA	-27	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	80.0930014975646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTCTTATTTCAGTA	50311079	True	NA	-9	True	AGTAAA	-2	NA	50312296	50325725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_50312390_50321482_50321595_50322510_50322720_50325608
transcript_28929.nic	chr14	+	587	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-27	1814	-27	0	5prime_fragment	FALSE	canonical	3	145	junction_1	33	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	50311079	True	NA	5	True	ATTAAA	-13	NA	50312296	50322892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_28930.known	chr14	+	719	5	FSM	ENSG00000125375.18	ENST00000555939.6	719	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	79.2022726946645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTAATTCTAAAATTTG	50311106	True	NA	NA	False	AAAACA	-18	NA	50312323	50324706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50324546
transcript_28931.known	chr14	-	4270	33	FSM	ENSG00000012983.12	ENST00000682126.1	4270	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.3276275909353	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTTATTTATTCTTT	-50526933	True	NA	-48	True	AATAAA	-18	NA	50532569	50418520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
transcript_28932.known	chr14	-	4354	33	FSM	ENSG00000012983.12	ENST00000013125.9	4354	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.3476858536291	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATAAAGTTATTTATT	-50526973	True	NA	-52	True	AATAAA	-14	NA	50532609	50418524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_28933.known	chr14	+	3844	14	FSM	ENSG00000198513.14	ENST00000556478.3	3844	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.08973343085225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATACATTCGATTTA	NA	False	NA	NA	False	ATTAAA	-5	NA	50532508	50634017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50532874_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_28935.known	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.83292380386141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	50532963	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_28941.known	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_13	53.0823329557223	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	-50934156	True	NA	-26	True	AATAAA	-21	NA	50944483	50905216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_28942.known	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	93.2326176166599	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	-50934156	True	NA	-27	True	AATAAA	-20	NA	50944483	50905217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
transcript_28946.known	chr14	+	850	6	FSM	ENSG00000131969.15	ENST00000554566.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	100.260460800856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATGCTGAAACCTCA	50893070	False	NA	NA	False	NA	NA	NA	50893581	50904571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50893759_50895563_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_28947.nnic	chr14	+	1232	6	NNC	ENSG00000131969.15	novel	850	6	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	106.440593760088	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50893030	False	NA	21	True	AATAAA	-21	NA	50893541	50904970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_50893759_50895620_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_28949.nnic	chr14	+	961	5	NNC	ENSG00000131969.15	novel	588	4	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	122.477548963065	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50892984	True	NA	21	True	AATAAA	-21	NA	50893495	50904970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_50893544_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_2895.known	chr1	+	2628	6	FSM	ENSG00000163879.11	ENST00000652629.1	2628	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	13.3266649991661	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTCTGAATTTTT	37555445	True	NA	15	True	AATAAA	-17	NA	37556939	37566857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37557076_37557602_37557749_37559326_37559497_37561556_37561736_37562080_37562246_37565025
transcript_28950.nic	chr14	+	1171	5	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	122.054035164758	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50892989	True	NA	21	True	AATAAA	-21	NA	50893500	50904970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_50893759_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_28954.known	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	15.6044865343272	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	-50934143	True	NA	14	True	AATAAA	-43	NA	50944470	50923236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_28956.nnic	chr14	+	1092	4	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	147.359726142827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50892989	True	NA	21	True	AATAAA	-21	NA	50893500	50904970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_50893759_50901828_50901912_50904073_50904193_50904338
transcript_28959.known	chr14	+	4025	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	80.7455059721213	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGTCAGATTATATA	51227117	True	NA	36	True	AATAAA	-30	NA	51240246	51257655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_28963.known	chr14	-	2229	1	FSM	ENSG00000273888.1	ENST00000617151.1	2229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCCTAAATCTGATTTA	-51651731	False	NA	NA	False	GATAAA	-37	NA	51651744	51649515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_51649500_51651700
transcript_28966.known	chr14	+	2125	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	34	1414	4	1220	multi-exon	FALSE	canonical	3	75	junction_2	5.71547606649408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	51859006	True	NA	NA	False	AAAAAG	-5	NA	51860645	51968381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
transcript_28969.known	chr14	+	3729	3	FSM	ENSG00000186469.9	ENST00000335281.8	3729	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	33.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	NA	False	NA	7	True	AATAAA	-17	NA	51860413	51969794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51860791_51950649_51950766_51966558
transcript_28975.known	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2149	junction_3	98.0840955298991	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	51968923	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
transcript_28977.known	chr14	+	851	8	FSM	ENSG00000087302.9	ENST00000556760.5	851	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	817.639759007721	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTATTGCTTTTTTCTT	51968992	True	NA	2	True	NA	NA	NA	51989614	52004653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004239_52004243_52004361
transcript_28979.known	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_9	8.99666604915399	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	-52550259	True	NA	-5	True	AATAAA	-20	NA	52552505	52430595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
transcript_28980.known	chr14	-	5139	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	18.3782480122562	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-52695380	False	NA	0	True	AATAAA	-18	NA	52695558	52639914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
transcript_28990.known	chr14	+	2163	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_4	72.3017182474833	1164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAATCATCATTGG	52693083	True	NA	NA	False	AATAAA	-16	NA	52707199	52728590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_29.known	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00074_+_0_500
transcript_29014.known	chr14	+	4554	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	119.573691791276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	52722123	True	NA	4	True	ATTAAA	-11	NA	52730179	52774941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_29017.known	chr14	+	4864	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_5	32.3061913570758	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	52722109	True	NA	31	True	ATTAAA	-27	NA	52730165	52774989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_29025.nnic	chr14	-	2340	7	NNC	ENSG00000100522.10	novel	3867	6	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	136.542626636845	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-52791303	True	NA	-23	True	AATAAA	-18	NA	52791686	52775192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_52775942_52777547_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29026.nnic	chr14	-	2994	7	NNC	ENSG00000100522.10	novel	3867	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.542626636845	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-52786112	True	NA	-23	True	AATAAA	-18	NA	52791627	52775192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_52775947_52776839_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29029.known	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	166.880862360614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-52791285	False	NA	NA	False	NA	NA	NA	52791668	52778374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
transcript_2903.known	chr1	-	2696	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	100.193562667469	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686749	True	NA	0	True	AATAAA	-13	NA	37690529	37681569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
transcript_29033.known	chr14	-	3867	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	23.0651251893416	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-52786092	True	NA	-23	True	AATAAA	-18	NA	52791607	52775192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_2904.known	chr1	-	919	5	FSM	ENSG00000116922.15	ENST00000464085.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	112.422195317473	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGACCACGGGTAC	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37683110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690215
transcript_29040.known	chr14	-	3247	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_13	34.321745617352	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTTTGTACTTG	-52950960	False	NA	-8	True	AATAAA	-17	NA	52950992	52857274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_29043.known	chr14	-	3286	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	91.0782630488746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	-52946345	True	NA	-6	True	AATAAA	-19	NA	52951050	52857272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_29045.nic	chr14	-	635	4	ISM	ENSG00000073712.15	ENST00000399304.7	2082	15	-68	33871	-36	0	5prime_fragment	FALSE	canonical	3	317	junction_1	31.0268700752536	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGATGACCAGTCTGAA	-52946381	True	NA	NA	False	AAAAAG	-5	NA	52951086	52893358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_52893428_52919122_52919357_52950411_52950578_52950920
transcript_29047.nic	chr14	-	1732	4	NIC	ENSG00000125378.16	novel	1708	4	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	17.6131264181639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956336	True	NA	3	True	AATAAA	-25	NA	53956888	53949735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_53950889_53951852_53952177_53953275_53953401_53956758
transcript_29048.known	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	7.03957069398096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956273	True	NA	3	True	AATAAA	-25	NA	53956825	53949735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
transcript_29049.known	chr14	-	1708	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1656862405839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956259	True	NA	3	True	AATAAA	-25	NA	53956811	53949735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
transcript_2905.known	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	117.885537705013	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686740	True	NA	0	True	AATAAA	-13	NA	37690520	37681569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
transcript_29052.known	chr14	-	1705	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCATGATTTTTTTTT	-53952903	False	552	-2	True	AATAAA	-20	NA	53953455	53949740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275
transcript_29054.known	chr14	+	874	9	NNC	ENSG00000100526.21	novel	938	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	543.122626577093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCGTTGTGTCTCTTT	54386009	True	NA	12	True	NA	NA	NA	54396954	54420214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411686_54412834_54412841_54415898_54415931_54417847_54417952_54419991
transcript_29055.known	chr14	+	938	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	528.558402047494	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386057	True	NA	16	True	NA	NA	NA	54397002	54420218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
transcript_29058.known	chr14	+	841	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_1	68.4621152498942	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386061	True	NA	16	True	NA	NA	NA	54397006	54420218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_29062.known	chr14	+	727	7	FSM	ENSG00000100526.21	ENST00000442975.6	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	447.846699961791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTCGTTGTGTCTCT	54386049	True	NA	10	True	NA	NA	NA	54396994	54420212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54399893_54399913_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_29065.nic	chr14	+	808	7	NIC	ENSG00000100526.21	novel	841	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	420.430500267946	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386011	True	NA	16	True	NA	NA	NA	54396956	54420218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_29073.known	chr14	+	689	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	455.286898559579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	NA	False	NA	NA	False	AATACA	-11	NA	54396848	54417951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
transcript_29074.known	chr14	-	838	6	FSM	ENSG00000100528.12	ENST00000557690.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	360.041886452118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAATGATGCATTAATT	-54433985	True	NA	NA	False	NA	NA	NA	54441391	54427522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436078_54436127_54436368_54436438_54441246
transcript_29076.known	chr14	-	4735	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	66.7359535782624	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-54433968	True	NA	-2	True	AATAAA	-17	NA	54441374	54423560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
transcript_29077.known	chr14	-	785	4	FSM	ENSG00000100528.12	ENST00000553660.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	329.757823595168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATAAATTAGCTGTAG	-54433951	True	NA	NA	False	NA	NA	NA	54441357	54427424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54441246
transcript_29078.known	chr14	-	856	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	339.405689731658	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGATGATTATATATGGATA	-54433970	True	NA	-67	True	NA	NA	NA	54441376	54427328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
transcript_29079.known	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	381.210644598961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-54433985	True	NA	-10	True	AATAAA	-12	NA	54441391	54426935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
transcript_29082.known	chr14	-	4125	7	FSM	ENSG00000197045.13	ENST00000616146.4	4125	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	330.653771589962	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTCCAGCTTTTCT	-54480349	True	NA	-26	True	AATAAA	-12	NA	54489026	54474490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54478160_54479785_54479860_54480873_54480956_54481407_54481459_54482152_54482203_54483670_54483768_54488924
transcript_29088.known	chr14	-	639	6	FSM	ENSG00000197045.13	ENST00000628554.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	441.014013382795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGACTTTTTGCACTC	-54480280	True	NA	NA	False	NA	NA	NA	54488957	54477857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54478160_54479785_54479860_54480873_54480957_54481408_54481459_54483670_54483768_54488924
transcript_2909.known	chr1	+	2303	11	FSM	ENSG00000134690.11	ENST00000327331.2	2303	11	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_1	87.6296753388942	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATCACTGTTCATCCT	37685215	True	NA	27	True	AATAAA	-21	NA	37692480	37709713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37692579_37692675_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_29096.known	chr14	+	2092	7	FSM	ENSG00000100532.13	ENST00000679557.1	2092	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	107.263952731361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCTTCTGAATAGTAA	54508490	True	NA	-5	True	AATAAA	-4	NA	54509905	54539271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530612_54530764_54530902_54531051_54537721_54537830_54538062
transcript_29097.nnic	chr14	+	1406	7	NNC	ENSG00000100532.13	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.710241774484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAAGAGTTTGGCCTTT	54508486	True	NA	21	True	CATAAA	-23	NA	54509901	54538614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_54510064_54515275_54515394_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_29099.known	chr14	+	1962	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	20.4978047605103	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	54508490	True	NA	16	True	AATAAA	-25	NA	54509905	54539292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_29101.nic	chr14	+	1243	6	NIC	ENSG00000100532.13	novel	1962	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	92.0860467171873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAAGAGTTTGGCCTTT	54508476	True	NA	21	True	CATAAA	-23	NA	54509891	54538614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538117
transcript_29104.known	chr14	+	1937	6	FSM	ENSG00000100532.13	ENST00000679442.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	72.6570024154589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGCAGAATGTGATCT	54508489	True	NA	NA	False	ATTAAA	-29	NA	54509904	54539087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530406_54530902_54531051_54537721_54537830_54538062
transcript_29107.known	chr14	+	1827	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	83.2163445484119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	54508486	True	NA	23	True	CATAAA	-25	NA	54509901	54538616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
transcript_2911.known	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	29.8332816055831	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	37685250	True	NA	33	True	AATAAA	-27	NA	37692515	37709719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_29110.known	chr14	+	622	5	FSM	ENSG00000100532.13	ENST00000557755.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	105.650366776458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAATTCCTCTTCAGA	54508496	True	NA	NA	False	NA	NA	NA	54509911	54538098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_29113.known	chr14	+	719	4	FSM	ENSG00000100532.13	ENST00000554791.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	114.499878699596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCAGCAGTGCCC	54509797	False	NA	NA	False	NA	NA	NA	54509811	54538281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54537721_54537830_54538062
transcript_29114.known	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_11	55.1433912631423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-55020123	True	NA	NA	False	AATAAA	-18	NA	55027099	54938948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_29117.known	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_24	77.8272660019182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-55020129	True	NA	-9	True	ATTAAA	-29	NA	55027105	54941158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
transcript_29122.known	chr14	+	6903	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGTTTTATTTTAA	55024201	True	NA	15	True	ATTAAA	-22	NA	55027235	55049489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55027472_55031862_55031992_55042951
transcript_29130.known	chr14	+	6779	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	55024195	True	NA	14	True	ATTAAA	-21	NA	55027229	55049488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55027472_55042951
transcript_29137.known	chr14	+	6466	4	FSM	ENSG00000168175.15	ENST00000395468.9	6466	4	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_1	96.858430482615	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTCTTTTTTTCCTG	55038208	True	NA	NA	False	NA	NA	NA	55051646	55070194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615
transcript_2914.nnic	chr1	-	1569	5	NNC	ENSG00000196449.4	novel	1848	5	NA	NA	483	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.298159689998	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTCTTTTGAA	-37802710	False	NA	-3	True	ATTAAA	-16	NA	37807725	37802944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807587
transcript_29143.known	chr14	+	958	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	11.0163514831363	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATTTAATTGGAGTG	55128418	True	NA	17	True	AATAAA	-26	NA	55129251	55145423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
transcript_29146.known	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	317.562409073413	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	-55171041	True	NA	14	True	AATAAA	-36	NA	55191544	55148111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_29156.known	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_6	125.45162857098	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-55171082	True	NA	-9	True	AATAAA	-13	NA	55191585	55148134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_29164.known	chr14	-	4715	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	8.2192186706253	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	-55408145	True	NA	0	True	AATAAA	-14	NA	55411830	55366390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_29166.known	chr14	-	2185	4	FSM	ENSG00000186615.12	ENST00000412224.6	2185	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	10.1434160364686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATACAAAAATTA	-55579521	True	NA	NA	False	NA	NA	NA	55580110	55557971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55559775_55561088_55561164_55578605_55578738_55579935
transcript_29167.known	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	21	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	-55579485	True	NA	-36	True	NA	NA	NA	55580074	55576185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55577380_55578605_55578738_55579935
transcript_29169.known	chr14	-	415	3	FSM	ENSG00000186615.12	ENST00000663686.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCACTCATTGCGTG	-55580848	True	NA	-10	True	ATTAAA	-14	NA	55580888	55577139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55577380_55578605_55578738_55580845
transcript_29172.known	chr14	+	2217	3	FSM	ENSG00000259868.3	ENST00000668222.1	2217	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCTATTATTTACAAA	NA	False	NA	NA	False	NA	NA	NA	55956179	55962947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55958167_55961980_55962088_55962824
transcript_29175.known	chr14	-	2956	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.553670620185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-56810424	False	NA	-1	True	AATGAA	-19	NA	56810448	56799904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
transcript_29178.known	chr14	-	2240	4	FSM	ENSG00000165588.19	ENST00000673481.1	2240	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	112.399090545945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAATTATATTAAAATG	-56810365	False	NA	-33	True	CATAAA	-27	NA	56810389	56800738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158
transcript_29179.known	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	12	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-56801033	True	NA	-1	True	ATTAAA	-16	NA	56805667	56800706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804340_56805359
transcript_29180.known	chr14	-	908	3	FSM	ENSG00000165588.19	ENST00000554845.2	1086	3	0	178	0	-103	multi-exon	FALSE	canonical	3	35	junction_2	109.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAGTCCCCAGCTTCTC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804364_56805359
transcript_29181.known	chr14	-	835	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTAACTTCAATGC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56805359
transcript_29182.known	chr14	-	624	2	FSM	ENSG00000258592.1	ENST00000551408.2	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACCCTTGGGAAGGATA	-57112429	True	NA	NA	False	NA	NA	NA	57112660	57067007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57067166_57112194
transcript_29184.known	chr14	-	10486	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_13	42.9213491695318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAATTGTTGTTTTTG	-57257617	True	NA	-6	True	AATAAA	-18	NA	57268905	57200506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_29185.known	chr14	-	2349	18	FSM	ENSG00000070367.16	ENST00000555148.5	2349	18	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_16	107.779988641478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCGGTTGATAGAAAGCA	-57257549	True	NA	NA	False	NA	NA	NA	57268837	57208544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246828_57247617_57247713_57268621
transcript_2919.known	chr1	+	2229	2	FSM	ENSG00000197982.14	ENST00000373043.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGACCGACGTTTCC	NA	False	NA	27	True	ATTAAA	-18	NA	37806978	37809452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37808733_37808977
transcript_29192.known	chr14	+	1815	9	FSM	ENSG00000053770.12	ENST00000431972.6	1815	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	106.387190840815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCATAATCTTAT	57265592	True	NA	NA	False	TTTAAA	-26	NA	57269055	57288925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269389_57273708_57273751_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29196.known	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	21.2458879574858	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	57265507	True	NA	5	True	AATAAA	-17	NA	57268970	57298742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29198.nic	chr14	+	2762	8	NIC	ENSG00000053770.12	novel	11675	8	NA	NA	-27	0	intron_retention	FALSE	canonical	3	30	junction_1	77.6288921598085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATCTTGGGTTCTGTTT	57268685	False	NA	NA	False	ATTAAA	-19	NA	57268896	57290074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_57269070_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_2920.known	chr1	-	7937	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	2.4576411454889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	-37858552	True	NA	-6	True	ATTAAA	-35	NA	37859592	37809573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
transcript_29200.known	chr14	+	1691	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGAGAGAGACAGGC	57265460	True	NA	41	True	NA	NA	NA	57268923	57275469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269389_57274243
transcript_29203.known	chr14	+	610	2	FSM	ENSG00000053770.12	ENST00000556995.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATCTGTGACTCAGC	57265476	True	NA	NA	False	NA	NA	NA	57268939	57274723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269070_57274243
transcript_29204.known	chr14	+	1294	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	80.2426874480715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAAGAGATAAGAAAAG	57386209	True	NA	NA	False	NA	NA	NA	57390543	57410330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
transcript_29208.nnic	chr14	-	1687	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29058	-2723	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	16.9901932498329	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGTCACTGTGGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	58033082	58003483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_29209.nnic	chr14	-	1117	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29058	-3293	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	16.9901932498329	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTTTGCTGTCTTAAA	NA	False	NA	-3	True	ATTAAA	-18	NA	58033082	58004053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_2921.nic	chr1	-	802	2	ISM	ENSG00000188786.10	ENST00000373036.5	7937	11	-16	47412	-16	363	5prime_fragment	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCATGTTTCTGGTG	-37858568	True	NA	NA	False	AATAAA	-18	NA	37859608	37856985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_37857710_37859530
transcript_29210.nnic	chr14	-	2271	3	NIC	ENSG00000257621.9	novel	2475	5	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATTTTTCTCTGGGAT	-58296044	True	NA	-12	True	ATTAAA	-13	NA	58298129	58265370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_58267394_58291634_58291708_58297954
transcript_29213.known	chr14	+	2408	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	219	junction_5	67.456313023072	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTCATTCTTT	58194757	True	NA	5	True	AATGAA	-17	NA	58200148	58235636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_29216.known	chr14	+	540	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_3	34.3155293643498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTATGGCACACAG	58194778	True	NA	NA	False	AATAAA	-18	NA	58200169	58209257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
transcript_29217.known	chr14	+	1602	13	FSM	ENSG00000131966.14	ENST00000545307.6	1602	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	116.961175894682	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTATATCAATAAAGTA	58200067	False	NA	-17	True	NA	NA	NA	58200079	58234760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211411_58213640_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_29218.known	chr14	+	1544	14	FSM	ENSG00000131966.14	ENST00000554402.6	1544	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	146.161416807972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAGTATAGTAAAG	58194827	False	NA	-9	True	NA	NA	NA	58200218	58234768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58231079_58231154_58232065_58232268_58234369
transcript_2922.known	chr1	-	4450	24	FSM	ENSG00000204084.13	ENST00000373024.8	4450	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	84.1012082702394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37946113	True	NA	-2	True	GATAAA	-17	NA	37947053	37860696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
transcript_29227.known	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	208.499424459637	4700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	58221145	True	NA	22	True	ATTAAA	-15	NA	58244842	58272004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_29231.known	chr14	+	908	11	FSM	ENSG00000100567.13	ENST00000412908.6	908	11	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_5	859.0097147297	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTAATATCTGCTTT	58221179	True	NA	30	True	ATTAAA	-23	NA	58244876	58272012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260968_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_2924.known	chr1	-	3905	18	FSM	ENSG00000204084.13	ENST00000373027.5	3905	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	18.6070269867918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37928996	True	NA	-2	True	GATAAA	-17	NA	37931749	37860696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
transcript_29245.known	chr14	+	640	8	FSM	ENSG00000100567.13	ENST00000555743.1	640	8	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	208.183886533624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTCTTACCATCCAC	58221181	True	NA	NA	False	NA	NA	NA	58244878	58267528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473
transcript_29257.known	chr14	+	925	5	FSM	ENSG00000100567.13	ENST00000553665.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	255.452539623312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCAATAGT	58221158	True	NA	NA	False	AATAGA	-33	NA	58244855	58258454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924
transcript_29264.known	chr14	-	741	5	FSM	ENSG00000257621.9	ENST00000554378.5	741	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	40.034360242172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAACCCAGGAGGCAG	-58296049	True	NA	NA	False	NA	NA	NA	58298134	58267103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
transcript_2927.known	chr1	-	2774	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_7	131.475981052624	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-37968512	True	NA	-14	True	AATAAA	-18	NA	37990022	37956974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_29274.known	chr14	-	903	4	FSM	ENSG00000257621.9	ENST00000555275.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	33.0756708170825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGACTGGTGAAGACATC	-58296037	True	NA	NA	False	TATAAA	-43	NA	58298122	58266888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58267394_58273978_58274136_58291634_58291708_58297954
transcript_29276.known	chr14	-	1039	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	40.9986449640581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTAAGCATTCTTTC	-58296017	True	NA	NA	False	NA	NA	NA	58298102	58266607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
transcript_29285.known	chr14	-	398	4	FSM	ENSG00000257621.9	ENST00000553657.5	398	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	11.4697670227235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTACCAGCATCAAGATG	-58295999	True	NA	NA	False	TTTAAA	-25	NA	58298084	58274013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58274136_58291634_58291708_58293065_58293139_58297954
transcript_29290.known	chr14	-	1983	3	FSM	ENSG00000257621.9	ENST00000555707.5	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	40.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCATGTATTG	-58296044	True	NA	NA	False	AATAAA	-16	NA	58298129	58272400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58274136_58291634_58291708_58297954
transcript_29291.known	chr14	-	604	3	FSM	ENSG00000257621.9	ENST00000556400.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	50	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAGGCAGGAGACTC	-58296030	True	NA	NA	False	NA	NA	NA	58298115	58273640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58274011_58291634_58291708_58297954
transcript_29292.known	chr14	+	435	2	FSM	ENSG00000100567.13	ENST00000554456.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAATCCTTCAGTT	58221176	True	NA	2	True	AATAAA	-17	NA	58244873	58245478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58245111
transcript_29296.nic	chr14	+	1669	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-17	21108	-16	-8054	5prime_fragment	FALSE	canonical	3	33	junction_10	10.0651212941855	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAGAAGAGAAAACAGAA	58296606	True	NA	NA	False	ATTAAA	-8	NA	58298538	58351118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_29297.nic	chr14	+	1830	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-44	20974	8	-7920	5prime_fragment	FALSE	canonical	3	33	junction_10	10.0651212941855	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAATTAAAAAACA	58296579	True	NA	NA	False	AATACA	-13	NA	58298511	58351252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_29298.nic	chr14	+	1570	15	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-114	24498	-62	-11444	5prime_fragment	FALSE	canonical	3	33	junction_10	10.3972131273879	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAAAAGACTTAGA	58298424	False	NA	NA	False	AGTAAA	-2	NA	58298441	58347728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646
transcript_293.known	chr1	+	681	1	FSM	ENSG00000248527.1	ENST00000514057.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	633685	False	NA	-23	True	NA	NA	NA	633695	634376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_633700_634400
transcript_29301.nic	chr14	+	1883	10	ISM	ENSG00000100578.18	ENST00000650845.1	6431	29	-2	65464	-2	-495	5prime_fragment	FALSE	canonical	3	44	junction_2	13.472422678921	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAACAAATAGCAT	58426155	True	NA	NA	False	NA	NA	NA	58427716	58456783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701
transcript_29302.known	chr14	-	1252	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	103.895331945184	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATGCATGATCCTTTT	-58427467	False	NA	-9	True	CATAAA	-19	NA	58427531	58408494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
transcript_29307.known	chr14	-	746	5	FSM	ENSG00000100575.14	ENST00000556007.6	746	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	104.688526114374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAATATCACTGAGCAG	-58419967	True	NA	-33	True	AGTAAA	-5	NA	58427114	58408663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58409100_58410842_58410939_58411906_58411972_58424007_58424096_58427053
transcript_29308.known	chr14	+	376	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGATCGTCAGATACAT	NA	False	NA	NA	False	NA	NA	NA	58794653	58795029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58794700_58795000
transcript_29310.known	chr14	+	5890	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	11.0471684406257	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	59186488	True	NA	16	True	AATAAA	-22	NA	59188666	59371403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
transcript_29320.known	chr14	+	2524	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	287.754288607911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	NA	False	NA	68	True	ATTAAA	-15	NA	59484442	59505404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29323.known	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	97.135072050327	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	59478031	True	NA	74	True	ATTAAA	-21	NA	59484516	59505410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29325.known	chr14	+	1191	7	FSM	ENSG00000050130.18	ENST00000553941.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	239.373313745149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAATATTATCTGCTACA	59478083	True	NA	NA	False	NA	NA	NA	59484568	59504274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59486680_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29329.known	chr14	+	1636	7	FSM	ENSG00000050130.18	ENST00000425728.6	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	171.836566409934	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAATGTTTTGA	59478017	True	NA	NA	False	AATAAA	-13	NA	59484502	59504703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_2933.nnic	chr1	-	1745	16	NIC	ENSG00000183431.12	novel	2774	17	NA	NA	-7	107	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	417.377665377001	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGGTTATGGACCAAC	-37968572	True	NA	-26	True	AATAAA	-19	NA	37990082	37957955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_29333.known	chr14	+	2137	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	242.279051692235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	59478059	True	NA	NA	False	AATAAA	-15	NA	59484544	59504705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29336.nic	chr14	+	1596	6	NIC	ENSG00000050130.18	novel	1636	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	229.047593307592	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	59477985	True	NA	NA	False	AATAAA	-15	NA	59484470	59504705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29342.known	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	24.0767003553228	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-59483289	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
transcript_29345.known	chr14	-	1703	7	FSM	ENSG00000139970.18	ENST00000342503.8	1703	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	5.27309733985213	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTCTCTTCTCATGCA	-59630804	True	NA	-2	True	AATAAA	-21	NA	59630814	59595976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59630445
transcript_29352.known	chr14	+	17339	10	FSM	ENSG00000126773.13	ENST00000317623.8	17339	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	25.2869946566497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	60091910	60148221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60092420_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_29356.known	chr14	-	1956	7	FSM	ENSG00000100612.14	ENST00000557185.6	1956	7	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_3	25.2102272015854	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGCTTAGTATTAGT	-60161113	True	NA	NA	False	ATTAAA	-26	NA	60165398	60144118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60145014_60149352_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_29359.known	chr14	-	1361	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_2	20.5465325541805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAATAAATAAAAAA	-60165266	False	4285	NA	False	NA	NA	NA	60165293	60148947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_29361.known	chr14	-	924	4	FSM	ENSG00000100612.14	ENST00000556502.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	15.1510909031513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGATAATAAGATGT	-60161065	True	NA	NA	False	NA	NA	NA	60165350	60152688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60153179_60153958_60154066_60155999_60156153_60165176
transcript_29362.known	chr14	-	563	2	FSM	ENSG00000100612.14	ENST00000555171.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTTCTGCCACCT	-60161133	True	NA	NA	False	NA	NA	NA	60165418	60155831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60156153_60165176
transcript_29363.known	chr14	+	8231	6	FSM	ENSG00000100614.18	ENST00000395076.9	8231	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	16.5819178625393	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATTTATGATTG	60247783	True	NA	NA	False	AATAAA	-16	NA	60249220	60299087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60249678_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_29365.known	chr14	-	2780	18	FSM	ENSG00000179008.9	ENST00000321731.8	2780	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.905835481417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGTGACTGTTGA	-60485933	True	NA	-1	True	AATAAA	-14	NA	60486063	60435955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60437048_60442073_60442132_60455000_60455146_60456916_60457096_60458677_60458740_60461353_60461413_60461507_60461594_60465978_60466056_60466916_60467045_60468444_60468537_60469532_60469654_60471416_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_29367.nic	chr14	-	829	7	ISM	ENSG00000179008.9	ENST00000321731.8	2780	18	-16	35329	-16	347	5prime_fragment	FALSE	canonical	2	8	junction_6	5.15320827791344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	-60485949	True	NA	-4	True	ATTAAA	-16	NA	60486079	60471284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_29370.nnic	chr14	+	1276	8	NNC	ENSG00000020426.11	novel	680	5	NA	NA	-11729	0	intron_retention	FALSE	canonical	3	54	junction_1	181.301530324372	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	60722034	True	NA	19	True	AATAAA	-16	NA	60723012	60968678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_60723119_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_29379.known	chr14	+	612	2	FSM	ENSG00000020426.11	ENST00000555545.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGCAACTTGCTGTC	60723424	True	NA	NA	False	NA	NA	NA	60734741	60753954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60753552
transcript_29380.known	chr14	+	2648	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_3	42.3883888606784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTAGTTGCTATTGC	60723443	True	NA	NA	False	AATAAA	-27	NA	60734760	60969965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_29381.known	chr14	+	1220	7	FSM	ENSG00000020426.11	ENST00000539616.6	1220	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	201.14650547963	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	60723458	True	NA	19	True	AATAAA	-16	NA	60734775	60968678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60879713_60879836_60968228
transcript_29382.known	chr14	+	680	5	FSM	ENSG00000020426.11	ENST00000557134.1	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	243.058120621386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGGTTTTTCTCTTA	60811975	False	NA	21	True	AATAAA	-18	NA	60811986	60968680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60812128_60818721_60818848_60879713_60879836_60968228_60968398_60968558
transcript_29386.nic	chr14	+	1643	17	NIC	ENSG00000139974.16	novel	2501	21	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	31.0714901477222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTATTTTGT	60980240	True	NA	6	True	AATAAA	-17	NA	60981202	61083729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078829_61078928_61083549
transcript_29387.known	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	19.0717941823346	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	60980282	True	NA	4	True	AAAAAG	-25	NA	60981244	61052630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_29398.nnic	chr14	+	1363	14	NIC	ENSG00000139974.16	novel	1568	17	NA	NA	24	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_12	34.7596991700235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTATTTTGT	60980175	True	NA	6	True	AATAAA	-17	NA	60981137	61083729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61078809_61078928_61083549
transcript_2940.nnic	chr1	-	2528	14	NIC	ENSG00000183431.12	novel	2774	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_5	432.768834258343	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-37968512	True	NA	-14	True	AATAAA	-18	NA	37990022	37956974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_29409.known	chr14	+	559	4	FSM	ENSG00000139974.16	ENST00000532148.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	52.563189485503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTGGCATCTAAACACA	60980274	True	NA	NA	False	TTTAAA	-21	NA	60981236	61002236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61002028
transcript_29415.known	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	7.1239034243875	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-60978908	True	NA	2	True	AATAAA	-30	NA	60981079	60971440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
transcript_29416.nic	chr14	-	1757	5	NIC	ENSG00000126814.7	novel	5304	5	NA	NA	7	-3570	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	60.4648658313239	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTACTTTGCCTTATT	NA	False	NA	0	True	AATAAA	-29	NA	60981163	60975010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60981023
transcript_2942.nnic	chr1	-	1607	14	NIC	ENSG00000183431.12	novel	2774	17	NA	NA	-7	107	combination_of_known_splicesites	FALSE	canonical	3	63	junction_5	432.768834258343	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGGTTATGGACCAAC	-37968572	True	NA	-26	True	AATAAA	-19	NA	37990082	37957955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_29421.known	chr14	+	3720	14	FSM	ENSG00000027075.17	ENST00000332981.11	3720	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	5.77179430224741	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGTTTTGACTAGAAT	61321102	True	NA	10	True	AATAAA	-18	NA	61321578	61550976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61322465_61391224_61391289_61443110_61443262_61445691_61445727_61449163_61449253_61450841_61450972_61453225_61453354_61457175_61457320_61457505_61457680_61485501_61485657_61529074_61529214_61530406_61530596_61547742_61547887_61549684
transcript_29423.known	chr14	+	3922	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	166.390016993514	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61684353	True	NA	23	True	AATAAA	-19	NA	61695539	61748258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
transcript_29424.known	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	192.583402358317	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61695766	False	NA	23	True	AATAAA	-19	NA	61695776	61748258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
transcript_29429.nic	chr14	+	1753	10	ISM	ENSG00000100644.17	ENST00000337138.9	3946	15	-19	9979	-19	-2619	5prime_fragment	FALSE	canonical	3	507	junction_1	79.4552440212044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGTCACTGGAACTTT	61684307	True	NA	11	True	ATTAAA	-13	NA	61695493	61738279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086
transcript_29431.known	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	23.5172644751693	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	61758720	True	NA	15	True	AATAAA	-18	NA	61762419	61796428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
transcript_29445.known	chr14	-	976	4	FSM	ENSG00000140006.12	ENST00000554717.1	976	4	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	57.249939349798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTATAAACAGATTTACT	-63639213	True	NA	NA	False	NA	NA	NA	63641853	63599262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_63599974_63624927_63625034_63641298_63641408_63641803
transcript_29449.known	chr14	-	1687	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACTTTTTAGAAGGA	-63641393	False	NA	-82	True	AGTAAA	-26	NA	63641407	63598501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_63599974_63624927_63625034_63641298
transcript_29450.known	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-63639231	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_63599974_63624927_63625034_63641803
transcript_29457.nic	chr14	+	339	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	-43	18	-17	-18	multi-exon	FALSE	canonical	3	71	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	63641988	False	NA	13	True	AATGAA	-27	NA	63642017	63651490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_63642198_63651331
transcript_29461.known	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	107.803433372567	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	64368335	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_29465.known	chr14	+	6814	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_26	286.402479349455	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	64387985	True	NA	15	True	AATAAA	-19	NA	64388030	64463457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
transcript_2947.nnic	chr1	-	1145	9	NNC	ENSG00000183431.12	novel	2774	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	523.12831540168	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-37968512	True	NA	-14	True	AATAAA	-18	NA	37990022	37956974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_37957403_37980615_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_29472.known	chr14	+	3082	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	92.8941246796588	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	64368344	True	NA	NA	False	NA	NA	NA	64388361	64455173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
transcript_29482.known	chr14	-	10365	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	28	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGTGTCCTTTCATG	-64503738	True	NA	-1	True	AATAAA	-18	NA	64503838	64478050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_64488058_64490360_64490541_64503660
transcript_29484.known	chr14	+	3642	2	FSM	ENSG00000126804.14	ENST00000683701.1	3642	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTAATGTGAATTAC	64503885	True	NA	NA	False	AATAAA	-19	NA	64504769	64524951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64504947_64521486
transcript_29485.known	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	64537688	True	NA	10	True	AGTAAA	-19	NA	64540740	64543237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64540700_64543200
transcript_29486.known	chr14	+	1349	12	FSM	ENSG00000165807.8	ENST00000298705.6	1349	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.06105164522812	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGGTTATTCGTTGTT	64549932	True	NA	NA	False	AGTAAA	-17	NA	64549960	64589381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64550067_64550920_64550986_64552813_64552862_64564750_64564838_64565356_64565455_64565625_64565693_64568348_64568448_64574454_64574590_64586836_64586880_64587193_64587373_64588103_64588296_64589151
transcript_29488.known	chr14	+	1468	14	FSM	ENSG00000125954.13	ENST00000549987.1	1468	14	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	561.791586784858	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTATACGTTTCAATA	64901351	True	NA	-36	True	NA	NA	NA	64914492	65061361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_2949.known	chr1	-	704	7	FSM	ENSG00000183431.12	ENST00000470585.5	704	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	564.485606548121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATGGTTGTGTTGTGA	-37968485	True	NA	NA	False	TTTAAA	-20	NA	37989995	37979390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37989547_37989596_37989869
transcript_29492.known	chr14	+	3518	4	FSM	ENSG00000258289.10	ENST00000549115.7	3518	4	0	0	0	0	multi-exon	FALSE	canonical	3	1462	junction_2	170.241005636128	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	64901313	True	NA	16	True	AATAAA	-26	NA	64914454	64935368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64932137
transcript_29493.known	chr14	+	439	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	848.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCATATTTTTTTTC	64901273	True	NA	52	True	AATACA	-41	NA	64914414	64932320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64932137
transcript_29494.known	chr14	+	571	2	FSM	ENSG00000258289.10	ENST00000556089.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	1864	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACAGTATAATACCATG	64901316	True	NA	NA	False	NA	NA	NA	64914457	64924484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990
transcript_29496.known	chr14	-	922	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGCCTGTGTGTGTGT	-64942644	True	NA	-5	True	AATAAA	-16	NA	64942745	64939157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_64939839_64942504
transcript_29497.known	chr14	+	326	3	FSM	ENSG00000258289.10	ENST00000547625.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGAACTCACCAGTAGA	64923984	True	NA	NA	False	CATAAA	-32	NA	64924009	64930937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64924127_64926009_64926081_64930799
transcript_29499.known	chr14	+	2711	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	12.4389417848655	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	64985275	True	NA	4	True	AATAAA	-15	NA	64986894	65062650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_295.nnic	chr1	+	1651	7	NNC	ENSG00000228794.11	novel	5333	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	22.2217361057942	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	826897	True	NA	11	True	AATAAA	-14	NA	827607	854387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853479_853527
transcript_29501.known	chr14	-	2097	6	FSM	ENSG00000125952.20	ENST00000394606.6	2097	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139.949133616468	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093166	True	NA	-3	True	AATAAA	-17	NA	65102519	65075126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65076664_65077343_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_29503.known	chr14	-	2010	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	116.77836914429	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093164	True	NA	-3	True	AATAAA	-17	NA	65102517	65075126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_29505.known	chr14	-	330	4	FSM	ENSG00000125952.20	ENST00000341653.6	330	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	70.0618774132314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	-65102355	False	9353	NA	False	AAAAAG	-21	NA	65102387	65006173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65006285_65093707_65093816_65101545_65101573_65102303
transcript_29506.known	chr14	-	1973	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	67.8871612800732	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	-65093151	True	NA	0	True	AATAAA	-20	NA	65102504	65075123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
transcript_29508.known	chr14	-	474	4	FSM	ENSG00000125952.20	ENST00000556892.5	474	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	182.435376686285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGACAACAGCCTCTACA	-65102663	True	NA	NA	False	NA	NA	NA	65102695	65076608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102508
transcript_29509.known	chr14	-	897	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	64.88108781113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGTACCTCTTTTT	-65093156	True	NA	NA	False	AATAAA	-19	NA	65102509	65083743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
transcript_29511.known	chr14	+	5166	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	16.4039629358274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	NA	False	NA	7	True	AATAAA	-16	NA	65410591	65744121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_29512.known	chr14	+	4249	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	13.5262707351287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	65412577	True	NA	7	True	AATAAA	-16	NA	65412729	65744121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_29513.known	chr14	-	1521	1	FSM	ENSG00000276116.2	ENST00000621019.2	1521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATGCATGGATGCT	-65412586	False	NA	NA	False	AATAAA	-16	NA	65412690	65411169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65411200_65412700
transcript_29514.known	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	9.20923000882114	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	66506489	True	NA	23	True	AATAAA	-27	NA	66508146	67181803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
transcript_29515.known	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	9.13867091662945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	67240238	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_29518.known	chr14	+	5006	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	19.3508160456517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	67240226	True	NA	25	True	AATAAA	-33	NA	67241422	67335819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_2952.known	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	44.9826633271086	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	-38005596	False	NA	NA	False	NA	NA	NA	38005606	37997344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
transcript_29522.known	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_4	31.8345331362029	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-67356359	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_29526.known	chr14	-	1085	8	FSM	ENSG00000100554.12	ENST00000555431.5	1085	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	133.848223517443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCTTGGCGCTGTTGTC	-67356342	True	NA	NA	False	NA	NA	NA	67359787	67338250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67359657
transcript_29528.known	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_3	157.908524281675	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	67347894	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
transcript_2953.nnic	chr1	-	1399	5	NIC	ENSG00000183386.10	novel	1656	6	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_4	76.7540715532407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	-38003627	True	NA	-9	True	AATAAA	-14	NA	38005515	37996769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005438
transcript_29532.known	chr14	+	527	3	FSM	ENSG00000134001.15	ENST00000556724.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_2	157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAATATTCTCAAATTAG	67347919	True	NA	NA	False	NA	NA	NA	67360352	67374648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67360457_67364766_67365009_67374467
transcript_29534.known	chr14	-	594	4	FSM	ENSG00000100564.9	ENST00000558001.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	42.4970587217516	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGATCCTGGCACAC	-67599018	True	NA	NA	False	NA	NA	NA	67600282	67590126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67590173_67592634_67592719_67593742_67593948_67600023
transcript_29537.known	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_5	43.7264222181509	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	67617029	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
transcript_29547.known	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	617.527237366004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	-67665501	True	NA	-125	True	NA	NA	NA	67674610	67651263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
transcript_29550.known	chr14	-	2539	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	409.604450116885	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACACTGTTCATTA	-67675256	True	NA	-19	True	AATAAA	-34	NA	67695764	67676799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_29551.known	chr14	-	1926	7	FSM	ENSG00000072042.13	ENST00000553384.5	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	256.054301966508	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAAACAAACAA	-67675246	True	NA	NA	False	NA	NA	NA	67695754	67677363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692972_67693053_67695629
transcript_29562.known	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_4	89.9497637573329	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-67665523	True	NA	NA	False	AGTAAA	-19	NA	67674632	67647084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
transcript_29568.known	chr14	-	1064	6	FSM	ENSG00000072042.13	ENST00000428130.6	1064	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	520.566230176334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACTACCTAGGAGAAT	-67675225	True	NA	NA	False	NA	NA	NA	67695733	67678033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_29579.known	chr14	-	888	4	FSM	ENSG00000072042.13	ENST00000554731.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	507.133775907962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATATGACCTGCACAG	-67675258	True	NA	NA	False	NA	NA	NA	67695766	67678072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67695629
transcript_2958.known	chr1	+	2023	8	FSM	ENSG00000183520.12	ENST00000373014.5	2023	8	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	58.1567200040774	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATAGTGTTTTATCTAG	38003657	True	NA	20	True	AATAAA	-16	NA	38012733	38024820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38012866_38016358_38016421_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_29583.known	chr14	+	1878	9	FSM	ENSG00000139988.10	ENST00000551171.6	1878	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77284706819664	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTATTTATTTTCTCA	67701855	False	NA	9	True	AATAAA	-17	NA	67701885	67734451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67701936_67720847_67720903_67722423_67722711_67724472_67724592_67725098_67725255_67726050_67726156_67726980_67727191_67729190_67729381_67733745
transcript_29587.known	chr14	+	922	7	FSM	ENSG00000182185.19	ENST00000390683.7	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.14087280053472	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTACAGTCTAATTGC	67818050	True	NA	NA	False	AATAAA	-35	NA	67819811	67887326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020
transcript_29588.nnic	chr14	+	2861	6	NIC	ENSG00000182185.19	novel	922	7	NA	NA	-11	1788	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	25.1793566240283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCATGAACTTTTACA	67818006	True	NA	NA	False	ATTAAA	-11	NA	67819767	67889338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_67819854_67823541_67823628_67825463_67825578_67865002_67865140_67885868_67885989_67887020
transcript_29589.known	chr14	+	1536	11	FSM	ENSG00000182185.19	ENST00000471583.6	1559	11	29	-6	0	-2	multi-exon	FALSE	canonical	3	6	junction_10	18.4780951399218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGGTGTAAAGGAATTG	67818046	True	NA	NA	False	AATAAA	-22	NA	67819807	68478099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68477647
transcript_29592.known	chr14	+	2596	11	FSM	ENSG00000182185.19	ENST00000487270.5	2596	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.0688813838739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAATCAGGGGAAAAATA	67818046	True	NA	NA	False	NA	NA	NA	67819807	68595996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68594484
transcript_29593.known	chr14	+	1673	11	FSM	ENSG00000182185.19	ENST00000487861.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.0688813838739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGTACCATATAGAAATA	67818017	True	NA	NA	False	NA	NA	NA	67819778	68611565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68611005
transcript_29594.known	chr14	-	279	2	FSM	ENSG00000259038.2	ENST00000556301.2	319	2	34	6	34	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCACGTAGCAATCTCAT	NA	False	NA	NA	False	GATAAA	-15	NA	68628445	68627165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_68627351_68628351
transcript_29596.nnic	chr14	-	1788	4	NNC	ENSG00000185650.10	novel	3026	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	70.8801805866774	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-68796129	False	NA	75	True	AATAAA	-19	NA	68796244	68787661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_68788810_68789526_68789669_68790164_68790493_68796074
transcript_29598.known	chr14	-	3026	3	FSM	ENSG00000185650.10	ENST00000336440.3	3026	3	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	592	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTAAGGGG	-68794621	False	NA	8	True	TTTAAA	-36	NA	68794736	68788604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_68788810_68789526_68790493_68792881
transcript_29599.known	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1360	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-68766303	True	NA	75	True	AATAAA	-19	NA	68793067	68787661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_68790493_68792881
transcript_2960.nnic	chr1	+	960	7	NIC	ENSG00000183520.12	novel	2023	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	333.559423324974	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTTTGGATTGTGAA	38003639	True	NA	17	True	ATTAAA	-17	NA	38012715	38023801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_38012866_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_29602.known	chr14	-	4803	9	FSM	ENSG00000139990.18	ENST00000554215.5	4803	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.7337639514349	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCACTCAGTGTGTGTTT	-69152588	False	NA	-9	True	ATTAAA	-37	NA	69152599	69051854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152413
transcript_29604.known	chr14	+	2688	10	FSM	ENSG00000081177.19	ENST00000409949.5	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	41.665629616724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAGAAAAAGTTCTTCC	69190173	False	NA	NA	False	GGGGCT	-25	NA	69191765	69241517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69192040_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_29607.known	chr14	+	2496	9	FSM	ENSG00000081177.19	ENST00000409242.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.8677489319908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCTTGTCTAGTGC	69191054	True	NA	NA	False	NA	NA	NA	69191805	69241449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_29611.known	chr14	+	2377	8	FSM	ENSG00000029364.12	ENST00000555840.5	2377	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	43.0969481376061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393739	False	NA	25	True	ATTAAA	-14	NA	69398737	69462381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362_69458730_69461696
transcript_29613.known	chr14	+	5399	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	15.2825245151302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	69393693	True	NA	34	True	ATTAAA	-23	NA	69398691	69462390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_29616.known	chr14	+	2065	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	41.1042036239063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	69393691	True	NA	32	True	ATTAAA	-21	NA	69398689	69462388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
transcript_29619.known	chr14	+	855	6	FSM	ENSG00000029364.12	ENST00000557046.1	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5378643060033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAAGGTCCAGCCTTG	69399357	False	NA	NA	False	NA	NA	NA	69399369	69458593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69454811_69454898_69455731_69455867_69458362
transcript_29621.known	chr14	+	5192	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	49.4246901861812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393693	True	NA	25	True	ATTAAA	-14	NA	69398691	69462381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_29629.known	chr14	-	791	4	FSM	ENSG00000100632.11	ENST00000557016.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	2505	junction_1	204.764905847332	2988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCCTGAGTGCTTTT	-69324749	True	NA	-12	True	AATAAA	-20	NA	69398299	69380127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69380641_69386962_69387084_69394824_69394913_69398230
transcript_2963.known	chr1	+	573	5	FSM	ENSG00000224592.5	ENST00000428151.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	2.27760839478607	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGGGCTTCAGAGCAC	38047412	False	NA	NA	False	NA	NA	NA	38047424	38119025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38047615_38102416_38102497_38103545_38103662_38105631_38105753_38118959
transcript_29630.known	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1244.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	-69324721	True	NA	-19	True	AATAAA	-13	NA	69398271	69380134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69380641_69386962_69387084_69398230
transcript_29631.known	chr14	+	1763	3	FSM	ENSG00000029364.12	ENST00000554059.1	1763	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	63	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCACTATTAATGTAC	69393709	True	NA	NA	False	NA	NA	NA	69398707	69429457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69428561
transcript_29638.known	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	525.176122061612	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	69727479	True	NA	5	True	NA	NA	NA	69767092	69771973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_29644.known	chr14	+	2443	7	FSM	ENSG00000100650.16	ENST00000556184.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	566.304810935673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTATTAAATGTCTTT	69727558	True	NA	-12	True	NA	NA	NA	69767171	69771642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
transcript_29651.known	chr14	+	2815	9	FSM	ENSG00000100650.16	ENST00000553521.5	2815	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	542.005246745823	3229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	NA	False	NA	19	True	AATAAA	-14	NA	69726899	69772004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69727192_69766113_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_29652.known	chr14	+	2057	8	FSM	ENSG00000100650.16	ENST00000555547.5	2057	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	574.169675554649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTTGATAAGCCTTC	69727572	True	NA	0	True	NA	NA	NA	69767185	69771654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510_69770541_69770994_69771106_69771193
transcript_29653.known	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_1	193.226913239331	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	69727479	True	NA	19	True	AATAAA	-14	NA	69767092	69772004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
transcript_29654.known	chr14	+	644	4	FSM	ENSG00000100650.16	ENST00000556647.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	713.967475138438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69770434	False	NA	20	True	AATAAA	-15	NA	69770447	69772005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69770541_69770994_69771106_69771193_69771545_69771916
transcript_29655.known	chr14	-	801	1	FSM	ENSG00000242071.3	ENST00000477943.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	-69885655	True	NA	NA	False	AAAAAG	-37	NA	69886140	69885339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69885300_69886100
transcript_29659.known	chr14	-	929	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	1154.53945796582	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-70412376	True	NA	-27	True	AATAAA	-28	NA	70417074	70326063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
transcript_2966.known	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	9.72967967955095	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-38858483	True	NA	-2	True	AATAAA	-17	NA	38859772	38838197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
transcript_29671.known	chr14	-	318	4	FSM	ENSG00000133983.16	ENST00000555276.5	318	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1155.41276895604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTAAGACAACTTGAC	-70412286	True	NA	-40	True	AAGAAA	-13	NA	70416984	70326351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70416899
transcript_29680.known	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	15.9234278833282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-70412392	True	NA	-17	True	AATAAA	-21	NA	70417090	70366498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
transcript_29689.known	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	1080	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	-70340016	True	NA	-31	True	AATAAA	-24	NA	70359700	70326067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70359518
transcript_2969.known	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	21.4184499906039	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	-38868844	True	NA	NA	False	ATTAAA	-17	NA	38873348	38862492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
transcript_29693.known	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	60.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-70412363	True	NA	-72	True	AATACA	-1	NA	70417061	70372487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70373132_70375675_70375772_70416899
transcript_29698.known	chr14	-	1669	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_3	72.6008876590975	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGTGATAATTTGTG	-70339999	True	NA	-10	True	AATAAA	-17	NA	70359683	70325080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
transcript_29702.known	chr14	-	2351	8	FSM	ENSG00000133997.12	ENST00000256379.10	2351	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.266050361061	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAGAATTCCTATATA	-70596401	True	NA	NA	False	NA	NA	NA	70600655	70583220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_29703.known	chr14	-	1507	8	FSM	ENSG00000133997.12	ENST00000430055.6	1507	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	69.2230939404898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATGAAGAAAAGGAAAAA	-70596401	True	NA	NA	False	AATAAA	-19	NA	70600655	70584085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70593010_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_29709.known	chr14	-	572	6	FSM	ENSG00000133997.12	ENST00000556044.5	572	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	88.739168353101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCACCCAAATTTGTGC	-70596399	True	NA	NA	False	NA	NA	NA	70600653	70591287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70591382_70592879_70592989_70593295_70593379_70596610_70596699_70597617_70597778_70600615
transcript_29710.known	chr14	-	862	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	23.2217570394662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-70596410	True	NA	NA	False	NA	NA	NA	70600664	70592510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_29711.known	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	15.7973274814304	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	-70596401	True	NA	NA	False	NA	NA	NA	70600655	70592577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
transcript_29712.known	chr14	-	975	9	FSM	ENSG00000133997.12	ENST00000554963.5	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.1089612847776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGATTGTTGTACTTTG	-70596389	True	NA	-4	True	AATAAA	-16	NA	70600643	70581256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70581489_70584816_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_29713.known	chr14	+	5094	3	FSM	ENSG00000133985.3	ENST00000256367.3	5094	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	70639316	True	NA	20	True	CATAAA	-20	NA	70641915	70675366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70642536_70667563_70667747_70671075
transcript_2972.known	chr1	-	750	4	FSM	ENSG00000214114.9	ENST00000494695.4	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	162.708327998293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTGTACGGGTTCC	-38868864	True	NA	NA	False	NA	NA	NA	38873368	38864235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38864715_38866879_38867000_38873017_38873091_38873290
transcript_29720.known	chr14	+	1659	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	70809732	False	NA	NA	False	AAAACA	-43	NA	70809890	70815994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70810666_70815110
transcript_29721.known	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	49	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	70809356	True	NA	NA	False	AATAAA	-17	NA	70809990	70815389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70810675_70815110
transcript_29724.known	chr14	+	368	2	ISM	ENSG00000259153.3	ENST00000554032.2	537	3	305	5	263	-5	3prime_fragment	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	70810180	False	NA	NA	False	AATAAA	-19	NA	70810204	70815391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_70810292_70815110
transcript_29726.known	chr14	+	284	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	70821883	True	NA	5	True	CATAAA	-23	NA	70822003	70823984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70822123_70823819
transcript_29742.known	chr14	+	2474	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	11.800611758287	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	72924417	True	NA	70	True	NA	NA	NA	72926463	72959703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_29744.known	chr14	+	1872	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.7906914082118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	72924404	True	NA	NA	False	AAAAAG	-24	NA	72926450	72959121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_29749.known	chr14	+	2374	14	FSM	ENSG00000119599.17	ENST00000555042.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.5227965011699	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	72924440	True	NA	11	True	AATAAA	-12	NA	72926486	72959644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954463_72955522_72955697_72956385_72956501_72958611
transcript_29751.known	chr14	+	6813	19	FSM	ENSG00000119707.14	ENST00000261973.12	6813	19	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_9	132.262178836647	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	73050981	True	NA	28	True	AATAAA	-38	NA	73058533	73123899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
transcript_29757.nic	chr14	+	1981	15	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-23	12990	-21	0	5prime_fragment	TRUE	canonical	3	228	junction_9	104.309195008232	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAGAAAAACGA	73050958	True	NA	30	True	AATAAA	-39	NA	73058510	73110909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830
transcript_29762.nic	chr14	+	1633	12	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-5	17640	-3	-4650	5prime_fragment	FALSE	canonical	3	228	junction_9	60.278554496864	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAAGAAAGAAGAAGA	73050976	True	NA	28	True	AAGAAA	-29	NA	73058528	73106259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195
transcript_29766.known	chr14	+	1567	11	FSM	ENSG00000119707.14	ENST00000526754.5	1567	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	126.835326309353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	73050996	True	NA	NA	False	AATAAA	-20	NA	73058548	73101179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73100363_73100713
transcript_29767.nnic	chr14	+	1145	11	NIC	ENSG00000119707.14	novel	1567	11	NA	NA	-1	2038	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	121.809728675504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAAAGACAGGAAA	73050978	True	NA	-6	True	NA	NA	NA	73058530	73103217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73100363_73103191
transcript_29768.nic	chr14	+	1461	11	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-7	17928	-5	4792	5prime_fragment	FALSE	canonical	3	228	junction_9	55.4855837132493	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAGAAAAAGACAAA	73050974	True	NA	-59	True	NA	NA	NA	73058526	73105971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858
transcript_29774.nic	chr14	+	1302	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-222	20682	-220	2038	5prime_fragment	FALSE	canonical	3	228	junction_9	53.6168390722426	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAAAGACAGGAAA	73058298	False	NA	-6	True	NA	NA	NA	73058311	73103217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_29776.known	chr14	+	2470	9	FSM	ENSG00000119707.14	ENST00000525321.5	2470	9	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_6	42.3844016119138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	73050994	True	NA	NA	False	AATAAA	-20	NA	73058546	73101179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666
transcript_29785.known	chr14	+	2776	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	32.4218067621009	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	73131744	True	NA	12	True	ATTAAA	-25	NA	73136446	73220401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_29788.known	chr14	+	6018	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	44.2225775327079	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	73131804	True	NA	7	True	AATAAA	-16	NA	73136506	73223691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_29793.known	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	-73245841	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73245245_73245523
transcript_29796.known	chr14	-	3604	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	65.147428959246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452301	True	NA	-13	True	AATAAA	-15	NA	73458546	73275215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_29800.known	chr14	-	3547	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	78.5552392895261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452277	True	NA	-13	True	AATAAA	-15	NA	73458522	73275215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_29802.known	chr14	-	3037	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	60.5427244811737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-73452335	True	NA	1	True	AATAAA	-33	NA	73458580	73275672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_29808.nic	chr14	-	3426	11	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_9	71.608728518247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452352	True	NA	-13	True	AATAAA	-15	NA	73458597	73275215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_29809.known	chr14	-	3607	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	76.6456782865153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	NA	False	NA	96	True	NA	NA	NA	73458617	73275106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_2981.known	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2179	junction_2	102.196807680084	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	38948954	True	NA	44	True	ATTAAA	-19	NA	38991275	39006059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
transcript_29814.nic	chr14	-	1909	9	ISM	ENSG00000133961.21	ENST00000555394.5	3037	12	-17	10520	-17	0	5prime_fragment	FALSE	canonical	3	202	junction_6	56.1146983864299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	-73452352	True	NA	NA	False	NA	NA	NA	73458597	73286192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_29817.nic	chr14	-	1876	8	ISM	ENSG00000133961.21	ENST00000557597.5	3547	12	-75	10977	-17	0	5prime_fragment	FALSE	canonical	3	99	junction_3	79.8335002057535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	-73452352	True	NA	NA	False	NA	NA	NA	73458597	73286192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_29819.known	chr14	-	1740	7	FSM	ENSG00000133961.21	ENST00000554315.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	96.0115733764541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	-73452301	True	NA	NA	False	NA	NA	NA	73458546	73286192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_29820.nic	chr14	+	1378	3	ISM	ENSG00000119673.16	ENST00000538782.2	1578	4	1350	-2	-243	0	3prime_fragment	FALSE	canonical	3	51	junction_1	35.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	NA	False	NA	14	True	ATTAAA	-17	NA	73568969	73575655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73569397_73573387_73573591_73574907
transcript_29821.nnic	chr14	-	857	3	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	98	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCACTCTGTCGCCCAGG	-73633719	False	124	NA	False	ATTAAA	-21	NA	73633843	73616686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_73617211_73619666_73619817_73633660
transcript_29822.known	chr14	-	629	2	FSM	ENSG00000258603.5	ENST00000555011.3	1303	2	658	16	-56	-16	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGACAGTCTCAC	-73633654	False	124	NA	False	ATTAAA	-8	NA	73633778	73616699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73617211_73633660
transcript_29823.known	chr14	+	632	9	FSM	ENSG00000119661.15	ENST00000554871.5	632	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.5315901642215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACGCTTTCCACTGTGT	73643779	True	NA	NA	False	ATTAAA	-25	NA	73645026	73695942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_29826.known	chr14	+	8417	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.328828005938	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	73643738	True	NA	11	True	AATAAA	-22	NA	73644985	73703732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_29827.known	chr14	+	2312	7	FSM	ENSG00000119661.15	ENST00000311089.7	2312	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.5788740984921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGAAAACTTGGTC	73643761	True	NA	NA	False	AATAGA	-34	NA	73645008	73697760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73645043_73654846_73654886_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_29829.known	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-73712655	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73711800_73714400
transcript_2983.known	chr1	+	1243	4	FSM	ENSG00000174574.16	ENST00000446189.6	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	1031.63828717024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTTAGGTTAATTCTT	38948966	True	NA	75	True	NA	NA	NA	38991287	39004761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38991601_38998170_38998312_39003346_39003419_39004044
transcript_29841.known	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	28.7163385405165	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	73884241	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_29845.known	chr14	+	1961	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5108302702508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	73886754	False	NA	NA	False	NA	NA	NA	73886807	73931840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_29850.known	chr14	+	2109	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	8.65500380757229	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	73949177	True	NA	NA	False	NA	NA	NA	73950301	73963670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_29852.known	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_3	11.3814405978613	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	-74080744	True	NA	NA	False	AATGAA	-27	NA	74084453	74056846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_2986.known	chr1	+	495	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	2012	junction_1	2337	8878	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTATTTTCTCTTGG	38898454	True	NA	21	True	AATAAA	-17	NA	39026349	39034615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39026403_39028722_39028941_39034391
transcript_29863.known	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	40.1327796196575	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	73886751	False	NA	11	True	AATAAA	-17	NA	73886804	73932278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_29867.known	chr14	+	1722	11	FSM	ENSG00000119725.21	ENST00000540593.5	1722	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.8328081431057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACAGGATGCCTTAGCC	73886599	True	NA	NA	False	NA	NA	NA	73886616	73931597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_2987.known	chr1	-	3142	16	FSM	ENSG00000090621.15	ENST00000372858.8	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	109.878033392586	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564737	True	NA	-14	True	AATAAA	-21	NA	39576790	39560815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_29878.known	chr14	+	2765	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	23.5282861023403	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	73848821	True	NA	NA	False	AGTAAA	-15	NA	73851830	73885726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_2988.known	chr1	-	3048	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	130.79024768265	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39576731	False	NA	-14	True	AATAAA	-21	NA	39576744	39560815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_29881.known	chr14	+	2543	10	FSM	ENSG00000140043.12	ENST00000555228.5	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	46.2147429846343	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGAATGTTTTGGCTT	73848834	True	NA	4	True	AGTAAA	-14	NA	73851843	73885456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_29885.known	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	54.9702500909513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	73848937	True	NA	7	True	AGTAAA	-17	NA	73851946	73885459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_2989.known	chr1	-	3016	15	FSM	ENSG00000090621.15	ENST00000372856.7	3016	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	158.657971879185	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39576738	False	NA	-14	True	AATAAA	-21	NA	39576751	39560815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_29895.nic	chr14	+	1435	9	NIC	ENSG00000140043.12	novel	2765	10	NA	NA	-27	0	combination_of_known_splicesites	TRUE	canonical	3	9	junction_5	64.7175352976301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGAACTGGAAATGTT	NA	False	NA	19	True	AATAAA	-31	NA	73851803	73884579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_299.nic	chr1	+	1698	6	ISM	ENSG00000228794.11	ENST00000691316.1	3092	7	-84	2805	0	0	5prime_fragment	FALSE	canonical	3	27	junction_3	15.587174214719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	826897	True	NA	9	True	AATAAA	-12	NA	827607	854385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390
transcript_2990.known	chr1	-	2122	15	FSM	ENSG00000090621.15	ENST00000677609.1	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	202.994885328148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	-39575900	False	NA	3	True	NA	NA	NA	39575913	39560856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_29911.nnic	chr14	+	1252	4	NNC	ENSG00000140043.12	novel	2765	10	NA	NA	-27	1838	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	86.3017960415657	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGAGTTCTGTTTTATC	NA	False	NA	10	True	AATAAA	-23	NA	73851803	73863564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_73851944_73858815_73858900_73860538_73860658_73862655
transcript_29914.known	chr14	+	649	5	FSM	ENSG00000119723.17	ENST00000554920.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	41.3604581696093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTCTTCTTTGCT	73949183	True	NA	NA	False	AATAAA	-18	NA	73950307	73963112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73962969
transcript_29915.known	chr14	+	1608	12	FSM	ENSG00000119723.17	ENST00000394026.8	1608	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27.5824833622673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	73949898	True	NA	NA	False	AATAAA	-14	NA	73949925	73963108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73950181_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_29916.known	chr14	+	689	6	FSM	ENSG00000119636.16	ENST00000464394.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCTCTCATTTAGACTT	74019259	True	NA	NA	False	NA	NA	NA	74019352	74048074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74019535_74029183_74029250_74034027_74034172_74040564_74040646_74046059_74046131_74047929
transcript_29917.nnic	chr14	+	2479	7	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-13	-260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	45.9842968365893	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGGTGAGTTTTTCCT	74081916	True	NA	14	True	AATAAA	-14	NA	74084942	74201233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921_74200053_74200200
transcript_2992.known	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.06155281280883	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-39639374	True	NA	2	True	AATAAA	-20	NA	39639643	39623434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
transcript_29920.known	chr14	+	585	6	FSM	ENSG00000205659.12	ENST00000554076.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	48.9514044742334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAGGAAAGATACACAC	74081936	True	NA	NA	False	ATTAAA	-22	NA	74084962	74114295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74114005
transcript_29921.nnic	chr14	+	606	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-13	4001	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	48.9514044742334	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATTCAATCTGATTCA	74081916	True	NA	NA	False	AATAAA	-19	NA	74084942	74118296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74118005
transcript_29922.nnic	chr14	+	875	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-13	14358	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	49.3290989173733	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGGCTGGGTGCAGTG	74081916	True	NA	NA	False	AGTAAA	-17	NA	74084942	74128653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74128093
transcript_29923.known	chr14	+	1798	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-3	1079	-3	-24	multi-exon	FALSE	canonical	3	93	junction_1	16.2406896405294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	74081926	True	NA	NA	False	NA	NA	NA	74084952	74200414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
transcript_29926.known	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	75.2898104364432	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	-74297940	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
transcript_29928.nic	chr14	-	2250	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_17	84.8679821514785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74298001	True	NA	-31	True	ATTAAA	-3	NA	74302995	74285995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
transcript_29929.known	chr14	-	1842	18	FSM	ENSG00000119688.21	ENST00000553486.5	1842	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_16	68.737804832194	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATGGGTCCTGTGCAG	-74297951	True	NA	NA	False	NA	NA	NA	74302945	74286344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_29936.nnic	chr14	-	2122	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_16	76.1934216320543	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74298001	True	NA	-31	True	ATTAAA	-3	NA	74302995	74285995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_29951.known	chr14	-	2336	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	70.4787201926936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAACATTAAAAAGA	-74297943	True	NA	31	True	NA	NA	NA	74302937	74286013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_29991.known	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	74336707	True	NA	25	True	AATAAA	-18	NA	74348470	74360008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74348653_74356782
transcript_29993.known	chr14	-	431	1	FSM	ENSG00000270000.1	ENST00000602790.1	431	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCTGAGATTTTAAATA	-74472338	False	NA	NA	False	AATAAA	-20	NA	74472360	74471929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74471900_74472400
transcript_29999.known	chr14	+	2581	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	419.154970015732	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	74480358	True	NA	NA	False	NA	NA	NA	74493764	74497106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
transcript_3.known	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1078	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00004_+_0_500
transcript_30.known	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00076_+_0_600
transcript_30002.known	chr14	+	925	3	FSM	ENSG00000165898.14	ENST00000555139.1	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	52.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCACCAGTTGTACCAA	74480365	True	NA	NA	False	NA	NA	NA	74493771	74495022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494274
transcript_30003.known	chr14	+	489	3	FSM	ENSG00000165898.14	ENST00000554924.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_2	379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGCCACTATTATTTT	74480358	True	NA	NA	False	NA	NA	NA	74493764	74495130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494825
transcript_30007.known	chr14	-	796	5	FSM	ENSG00000119655.11	ENST00000238633.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	668.471016574391	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	-74474923	True	NA	-7	True	AATAAA	-27	NA	74493291	74479941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74480289_74480710_74480780_74484414_74484588_74486328_74486437_74493192
transcript_30008.known	chr14	-	729	5	FSM	ENSG00000119655.11	ENST00000553490.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	668.471016574391	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGGTGGTTTCATT	-74474971	True	NA	-78	True	NA	NA	NA	74493339	74480081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74480289_74480685_74480780_74484414_74484588_74486328_74486437_74493192
transcript_30009.known	chr14	+	851	4	FSM	ENSG00000165898.14	ENST00000298818.12	851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	419.154970015732	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTTATTGTGTTGTGGA	74480349	True	NA	12	True	TATAAA	-18	NA	74493755	74495366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494274_74494405_74494838
transcript_3001.known	chr1	+	1198	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	335.512443882489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734502	True	NA	10	True	AATAAA	-18	NA	39738900	39763914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
transcript_30014.nnic	chr14	+	1660	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-14	1387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	70.3006934531943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCGTCTTTTTAG	74705738	True	NA	5	True	AATAAA	-4	NA	74713129	74736691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735551_74736316
transcript_30015.nnic	chr14	+	1657	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-14	1387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.3006934531943	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCGTCTTTTTAG	74705738	True	NA	5	True	AATAAA	-4	NA	74713129	74736691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735606_74736374
transcript_30016.nnic	chr14	+	1761	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-14	1491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.3006934531943	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAGGTGCTTAATAAGAG	74705738	True	NA	109	True	AATAAA	-16	NA	74713129	74736795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735606_74736374
transcript_30018.nnic	chr14	+	1777	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-14	1387	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	69.7710541700496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCGTCTTTTTAG	74705738	True	NA	5	True	AATAAA	-4	NA	74713129	74736691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735671_74736319
transcript_30031.nnic	chr14	+	1676	9	NNC	ENSG00000119616.11	novel	794	8	NA	NA	0	1387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	72.0312432212578	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCGTCTTTTTAG	74705778	True	NA	5	True	AATAAA	-4	NA	74713169	74736691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735606_74736374
transcript_3004.known	chr1	+	4339	10	FSM	ENSG00000084072.17	ENST00000324379.10	4339	10	0	0	0	0	multi-exon	TRUE	canonical	3	685	junction_1	75.3103865412179	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTTTATTTGACTTG	39734483	True	NA	NA	False	AATAAA	-17	NA	39738881	39756769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_30042.known	chr14	+	794	8	FSM	ENSG00000119616.11	ENST00000534938.6	794	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	48.7613932264835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAGATATTTATTATT	74705778	True	NA	NA	False	NA	NA	NA	74713169	74735040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
transcript_30043.nic	chr14	+	1380	2	ISM	ENSG00000119616.11	ENST00000554590.5	574	6	-14	18024	-14	-8550	5prime_fragment	FALSE	canonical	3	85	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTTTAGATTTTTGAG	74705738	True	NA	NA	False	NA	NA	NA	74713129	74714793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_74713201_74713484
transcript_30044.known	chr14	+	2813	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.72899891529302	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	74873772	True	NA	7	True	ATTAAA	-18	NA	74881915	74903743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
transcript_30046.nnic	chr14	+	690	9	NNC	ENSG00000119689.15	novel	2813	15	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	7.74495803732983	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	74873746	True	NA	7	True	ATTAAA	-18	NA	74881889	74903743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892924_74903649
transcript_30048.known	chr14	+	1365	7	FSM	ENSG00000119689.15	ENST00000555071.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.96219952473514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAAGCCTAAGTCAAC	74873778	True	NA	NA	False	NA	NA	NA	74881921	74892058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055
transcript_3005.known	chr1	+	1079	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	265.511851354844	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734486	True	NA	10	True	AATAAA	-18	NA	39738884	39763914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
transcript_30050.nic	chr14	-	786	2	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	-5	10891	0	-265	5prime_fragment	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAGAAAACAGAATC	-74922524	True	NA	NA	False	NA	NA	NA	74923260	74921780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_74922486_74923179
transcript_30051.known	chr14	-	1740	7	FSM	ENSG00000119630.14	ENST00000555567.6	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.07590871118606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGATCTAGTGGGTGTGT	-74955386	True	NA	-4	True	AATAAA	-18	NA	74955597	74941833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
transcript_30052.known	chr14	-	1699	6	FSM	ENSG00000119630.14	ENST00000553716.5	1699	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12.1161049846888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACGCTGATCTAGTG	-74955415	True	NA	-11	True	AATAAA	-11	NA	74955626	74941840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74942734_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
transcript_30053.nic	chr14	-	1030	2	ISM	ENSG00000119630.14	ENST00000557748.5	875	5	7719	-653	1700	0	3prime_fragment	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACGCTGATCTAGTG	-74946304	False	211	-11	True	AATAAA	-11	NA	74946515	74941840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_74942734_74946378
transcript_30054.known	chr14	+	4304	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	13.7914495841682	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	75002905	False	NA	NA	False	AATAAA	-16	NA	75002920	75012366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
transcript_30057.known	chr14	-	7820	13	FSM	ENSG00000119684.16	ENST00000355774.7	7820	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	15.3104448734262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCCTTCCATCCCTCT	-75050287	True	NA	-11	True	AATAAA	-15	NA	75051467	75013774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75033418_75033491_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_30058.known	chr14	-	7819	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	19.2074365763553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCATCCCTCTCTTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	75051532	75013768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_30060.known	chr14	-	2146	14	FSM	ENSG00000119638.14	ENST00000553823.6	2146	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.6846130521993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTATACTTCAACAAAT	-75123655	True	NA	-53	True	NA	NA	NA	75126964	75103469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_30064.known	chr14	-	4109	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	41.4276477729547	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTGTACTGTTACTC	-75147686	True	NA	-32	True	AATAAA	-16	NA	75176612	75131468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
transcript_30068.known	chr14	+	1606	4	FSM	ENSG00000119703.15	ENST00000532198.2	1606	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	75069698	False	NA	20	True	ATTAAA	-15	NA	75069807	75078089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75069949_75070554_75071397_75073570_75073636_75077531
transcript_30070.known	chr14	-	650	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	128.222029655161	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75060548	True	NA	-23	True	AATAAA	-16	NA	75064015	75053242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
transcript_30071.known	chr14	-	639	4	FSM	ENSG00000119640.9	ENST00000555135.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	132.410976382876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTAGCATAATATCCTC	-75060540	True	NA	NA	False	NA	NA	NA	75064007	75059847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75060262_75061683_75061763_75063469_75063562_75063953
transcript_30073.known	chr14	+	1509	3	FSM	ENSG00000119703.15	ENST00000439583.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	75069531	True	NA	20	True	ATTAAA	-15	NA	75069640	75078089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75069750_75070554_75071397_75077531
transcript_30074.known	chr14	+	1697	3	FSM	ENSG00000119703.15	ENST00000525046.2	1697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	75069542	True	NA	20	True	ATTAAA	-15	NA	75069651	75078089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75069949_75070554_75071397_75077531
transcript_30076.known	chr14	-	580	3	FSM	ENSG00000119640.9	ENST00000238618.8	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	14	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75060557	True	NA	-23	True	AATAAA	-16	NA	75064024	75053242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75053660_75063469_75063562_75063953
transcript_30077.known	chr14	+	2104	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	7.58653778449403	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	75277824	True	NA	10	True	AATAAA	-21	NA	75278827	75282230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
transcript_3008.known	chr1	+	1213	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	320.287370965513	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	39734509	True	NA	32	True	AATAAA	-30	NA	39738907	39753716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
transcript_30082.known	chr14	+	1595	10	FSM	ENSG00000119685.20	ENST00000286650.9	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	45.8930587290297	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	75658924	True	NA	NA	False	NA	NA	NA	75661277	75709828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75709178
transcript_30088.known	chr14	-	2320	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_2	74.7813479418498	701	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGTCAGAAAAGG	-75649610	True	NA	NA	False	NA	NA	NA	75660876	75649790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
transcript_30092.known	chr14	+	441	2	FSM	ENSG00000119686.10	ENST00000554496.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCACCTATCACCAAA	75578991	False	NA	NA	False	NA	NA	NA	75579455	75646655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75579642_75646400
transcript_30094.known	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	105.817569546325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	75983087	True	NA	8	True	AATAAA	-17	NA	75985752	76083741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_30095.known	chr14	+	816	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_4	30.4094454898474	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983097	True	NA	9	True	AATAAA	-18	NA	75985762	76083742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_301.nnic	chr1	+	1498	6	NNC	ENSG00000228794.11	novel	3094	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.3529441398724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	826897	True	NA	11	True	AATAAA	-14	NA	827607	854387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390_853479_853527
transcript_30100.nic	chr14	+	1076	8	ISM	ENSG00000119650.13	ENST00000555305.5	1765	9	-28	843	-1	0	5prime_fragment	FALSE	canonical	3	228	junction_4	32.504316824768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983086	True	NA	9	True	AATAAA	-18	NA	75985751	76083742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082693_76083226_76083290_76083457
transcript_30101.known	chr14	+	816	8	FSM	ENSG00000119650.13	ENST00000238628.10	816	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	130.661738071703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTTCTTTCCAGTCTC	75983116	True	NA	13	True	AATAAA	-22	NA	75985781	76083746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76076596_76076692_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_30111.known	chr14	+	848	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	32.6190128606002	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	75983118	True	NA	2	True	AATAAA	-15	NA	75985783	76059271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
transcript_30114.known	chr14	+	2438	10	FSM	ENSG00000089916.18	ENST00000312858.9	2438	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	55.1901315208068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGCGTGTTTATGAT	76146207	True	NA	11	True	AGTAAA	-22	NA	76151934	76202788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177891_76177932_76180763_76180850_76195877_76195973_76201690
transcript_30115.nnic	chr14	+	3262	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-13	-2464	intron_retention	FALSE	canonical	3	22	junction_9	38.7871685541036	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTTTTATGCTATTAT	76146175	True	NA	18	True	ATTAAA	-27	NA	76151902	76199543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76197668
transcript_30116.nnic	chr14	+	1518	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-13	-2477	intron_retention	FALSE	canonical	2	9	junction_9	42.5783228914305	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGTATTCCTGT	76146175	True	NA	5	True	ATTAAA	-14	NA	76151902	76199530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199399
transcript_30117.nnic	chr14	+	1871	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-13	-1644	intron_retention	FALSE	canonical	3	16	junction_9	40.5298244095218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	76146175	True	NA	1	True	AATAAA	-14	NA	76151902	76200363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
transcript_30118.known	chr14	+	14021	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	23.6068623628233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	76146194	True	NA	-4	True	NA	NA	NA	76151921	76214343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
transcript_30121.nic	chr14	+	1555	9	ISM	ENSG00000089916.18	ENST00000261530.12	14021	10	-19	18203	-13	153	5prime_fragment	FALSE	canonical	3	109	junction_7	16.0618920118397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTCTGTGCTTTTT	76146175	True	NA	NA	False	AAGAAA	-23	NA	76151902	76196140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877
transcript_30124.nic	chr14	+	1426	5	ISM	ENSG00000089916.18	ENST00000554125.5	6248	6	-31	6054	-13	-67	5prime_fragment	FALSE	canonical	3	128	junction_1	11.842719282327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCTTGAATTCATGAAT	76146175	True	NA	NA	False	NA	NA	NA	76151902	76173968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_30127.known	chr14	+	1458	5	FSM	ENSG00000089916.18	ENST00000557263.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8198298387348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	76146194	True	NA	NA	False	NA	NA	NA	76151921	76174035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_76151976_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_30128.known	chr14	-	980	2	FSM	ENSG00000258819.2	ENST00000658895.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTAATCTGTTATG	NA	False	NA	NA	False	AATAAA	-28	NA	77076392	77073906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77074599_77076104
transcript_30129.known	chr14	+	4325	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	12.2836838484589	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	77094773	True	NA	10	True	AATAAA	-21	NA	77098257	77117287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
transcript_30133.known	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	3.5	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-77135276	True	NA	-4	True	AATAAA	-21	NA	77141791	77131269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77133949_77139212_77139753_77141602
transcript_30137.known	chr14	+	1186	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	14.6708682428819	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	77316638	True	NA	22	True	ATTAAA	-19	NA	77321035	77331597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_30139.known	chr14	+	867	8	FSM	ENSG00000100577.19	ENST00000349555.7	867	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	48.8751011273029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGGGCAGGAATAC	77316627	True	NA	-73	True	NA	NA	NA	77321024	77331393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_30141.known	chr14	+	919	8	FSM	ENSG00000100577.19	ENST00000556627.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	53.2993088747932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCTATGTGACGGGGC	77316640	True	NA	-53	True	NA	NA	NA	77321037	77331413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_30143.known	chr14	+	873	8	FSM	ENSG00000100577.19	ENST00000557639.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	45.2764749475207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAACTTGTTCCAC	77316622	True	NA	NA	False	NA	NA	NA	77321019	77331320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_30144.known	chr14	+	2564	3	FSM	ENSG00000100583.5	ENST00000216471.5	2984	3	-246	666	-246	229	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGATATGATGTTTCACC	77377100	True	NA	NA	False	NA	NA	NA	77377132	77391497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77379108_77380382_77380482_77391007
transcript_30146.known	chr14	-	2934	20	FSM	ENSG00000151445.16	ENST00000553888.5	2934	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_19	24.0416305603426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456286	True	NA	-8	True	AATAAA	-24	NA	77457605	77426674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094
transcript_30147.known	chr14	-	2530	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	12.150715583729	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456282	True	NA	-8	True	AATAAA	-24	NA	77457601	77426674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
transcript_3015.known	chr1	-	1826	1	FSM	ENSG00000198754.5	ENST00000327582.5	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCCTCACTGTGTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	39771348	39769522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39769500_39771300
transcript_30153.known	chr14	+	1048	9	FSM	ENSG00000100591.8	ENST00000555133.5	1048	9	0	0	0	0	multi-exon	TRUE	canonical	2	25	junction_1	315.175918139378	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGCGGCAGGGGACT	77457659	True	NA	NA	False	ATTAAA	-32	NA	77457869	77469247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77457983_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_30155.known	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_7	69.1997787207445	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	77447619	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_30167.known	chr14	+	787	4	FSM	ENSG00000100591.8	ENST00000556963.5	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_3	5.90668171555645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTGTCTCTACAAAAA	77458075	False	NA	NA	False	NA	NA	NA	77458216	77463101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641
transcript_30168.known	chr14	-	2761	21	FSM	ENSG00000151445.16	ENST00000343765.6	2761	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_19	29.7365095463472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456242	True	NA	-8	True	AATAAA	-24	NA	77457561	77426674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457366_77457494
transcript_30170.known	chr14	-	8034	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	21.7023440102029	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTTTATTCATTCA	-77610875	True	NA	-1	True	AATAAA	-16	NA	77616637	77505996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
transcript_30173.nic	chr14	-	1894	6	NIC	ENSG00000100601.10	novel	2597	6	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	33.2830287083372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-77705644	True	NA	-60	True	AATAAA	-34	NA	77708046	77673074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_77674242_77675655_77675795_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_30174.known	chr14	-	2597	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	7.19444229944198	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGCTAGGTTCTTTG	-77705621	True	NA	1	True	AATAAA	-21	NA	77708023	77672403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_30175.known	chr14	-	1750	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	38.7201497930987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-77705608	True	NA	-60	True	AATAAA	-34	NA	77708010	77673074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
transcript_30177.nic	chr14	-	747	4	NIC	ENSG00000100601.10	novel	497	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	42.2400547137693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	-77705644	True	NA	NA	False	AATAAA	-16	NA	77708046	77691732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_77691983_77694737_77694901_77704368_77704478_77707821
transcript_3018.known	chr1	-	5051	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	42.6234677143941	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGACTCAACAATAC	-39880751	True	NA	NA	False	NA	NA	NA	39883504	39838109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_30180.known	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_13	76.5857990451534	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-77751912	True	NA	-20	True	AATAAA	-16	NA	77761156	77717598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_30185.known	chr14	-	1855	13	FSM	ENSG00000100603.14	ENST00000555761.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_12	79.3293066204974	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGGGGGGGATAGAA	-77751912	True	NA	NA	False	GATAAA	-45	NA	77761156	77717952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_30192.known	chr14	+	471	5	FSM	ENSG00000119705.10	ENST00000555890.5	471	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	7260.90485063673	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	77571063	True	NA	25	True	AATAAA	-13	NA	77708113	77717593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710554_77710666_77710837_77710897_77715771_77715880_77717495
transcript_30194.known	chr14	+	376	4	FSM	ENSG00000119705.10	ENST00000557342.6	376	4	0	0	0	0	multi-exon	FALSE	canonical	3	14327	junction_3	952.259185072822	10412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	77571052	True	NA	30	True	AATAAA	-18	NA	77708102	77717598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717495
transcript_30195.known	chr14	+	420	4	FSM	ENSG00000119705.10	ENST00000613856.4	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	7370.81953833267	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTCTAAATGTTT	77571020	True	NA	26	True	AATAAA	-14	NA	77708070	77717594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717479
transcript_30196.known	chr14	+	865	4	FSM	ENSG00000119705.10	ENST00000557623.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	7414.92487412306	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCTGAGATATAAAATT	77571052	True	NA	NA	False	AATATA	-17	NA	77708102	77721107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77720515
transcript_30197.known	chr14	+	445	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8267.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	77571070	True	NA	NA	False	ATTAAA	-13	NA	77708120	77712038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77711740
transcript_30201.known	chr14	+	3268	11	FSM	ENSG00000063761.16	ENST00000238561.10	3268	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.35609943282828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGGTTACTTGCTTTT	77799679	True	NA	NA	False	AGTAAA	-23	NA	77800108	77935014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_30204.known	chr14	+	1972	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1657508881031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	77799709	True	NA	15	True	AATAAA	-17	NA	77800138	77933952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_30209.nic	chr14	-	2541	13	ISM	ENSG00000100629.17	ENST00000555265.6	4614	25	-25	333686	-25	0	5prime_fragment	FALSE	canonical	3	21	junction_5	6.09815545882523	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGCAATGGTAATTA	-80940490	True	NA	NA	False	AATAAA	-17	NA	80941763	80830164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
transcript_30211.nnic	chr14	-	607	3	NNC	ENSG00000140022.14	novel	11084	9	NA	NA	0	-26080	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	11.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGATATGGTGTC	-81431273	True	NA	NA	False	AATAAA	-20	NA	81436465	81424452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_81424804_81427101_81427213_81436320
transcript_30212.nic	chr14	-	536	3	ISM	ENSG00000071537.14	ENST00000557372.1	594	5	-6	22385	-2	-22385	5prime_fragment	FALSE	canonical	3	150	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCACTGATTATTAC	-81532595	True	NA	NA	False	AATAAA	-15	NA	81533855	81526647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_81526965_81527700_81527739_81533674
transcript_30218.known	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	12.9638921624642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-87992219	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_3022.nic	chr1	-	2002	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	53.5691545666688	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880789	True	NA	-24	True	AATAAA	-17	NA	39883542	39841050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_30220.known	chr14	-	1221	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	11.3442213494224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTTTTACATGTAA	-87992191	True	NA	2	True	AATAAA	-14	NA	87993154	87963313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_30222.known	chr14	+	2000	12	FSM	ENSG00000042317.17	ENST00000393545.9	2000	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	10.560334329794	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	88384880	True	NA	14	True	AATAAA	-25	NA	88385656	88438460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_30225.known	chr14	+	1891	11	FSM	ENSG00000042317.17	ENST00000356583.9	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9.51262319236918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTACTTTTCTTCCTTT	88384891	True	NA	12	True	AATAAA	-23	NA	88385667	88438458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_30229.known	chr14	+	2529	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	168.697850738384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	88552896	True	NA	NA	False	NA	NA	NA	88563037	88611991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_3023.known	chr1	-	2034	10	FSM	ENSG00000043514.17	ENST00000372818.5	2034	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	55.4699340205747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880753	True	NA	-24	True	AATAAA	-17	NA	39883506	39841050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_30230.known	chr14	+	18153	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_10	113.812328390865	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTATTCTTGTTTTTT	88552895	True	NA	NA	False	ATTAAA	-17	NA	88563036	88627596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30232.nic	chr14	+	2521	17	NIC	ENSG00000100722.20	novel	6188	19	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	243	junction_14	126.569891759454	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGTGTCTAATTTTTC	88552816	True	NA	34	True	AATATA	-36	NA	88562957	88611888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30237.known	chr14	+	2195	16	FSM	ENSG00000100722.20	ENST00000393514.9	2195	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	161.676989361161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTCTACAGAACTTGTC	88552992	False	NA	-44	True	NA	NA	NA	88563133	88611810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_3024.known	chr1	-	1851	9	FSM	ENSG00000043514.17	ENST00000441669.6	1851	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	57.8332732948776	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880738	True	NA	-24	True	AATAAA	-17	NA	39883491	39841050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848092_39850118_39850262_39852730_39852877_39883317
transcript_30244.known	chr14	+	2075	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_10	139.927751036755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	88552868	True	NA	30	True	AATATA	-32	NA	88563009	88611884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30246.nic	chr14	+	2128	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_10	152.233591321136	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGTGTCTAATTTTTC	88552816	True	NA	34	True	AATATA	-36	NA	88562957	88611888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30249.nic	chr14	+	2056	14	NIC	ENSG00000100722.20	novel	2075	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	154.342468663476	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGTGTCTAATTTTTC	88552816	True	NA	34	True	AATATA	-36	NA	88562957	88611888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30251.known	chr14	+	2560	14	FSM	ENSG00000100722.20	ENST00000302216.12	2560	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	166.512859996995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAATAGGAACAGTT	88552828	True	NA	NA	False	NA	NA	NA	88562969	88612407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30255.known	chr14	+	2183	15	FSM	ENSG00000165533.19	ENST00000380656.7	2183	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.7499731471384	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823584	True	NA	16	True	AATAAA	-19	NA	88824650	88877988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88833692_88833723_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_30257.known	chr14	+	5270	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	15.7772962488215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTTTTTTTTTT	88823557	True	NA	NA	False	ATTAAA	-13	NA	88824623	88881078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_30258.known	chr14	+	2058	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.14201229975594	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823589	True	NA	16	True	AATAAA	-19	NA	88824655	88877988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_30259.known	chr14	+	1859	12	FSM	ENSG00000165533.19	ENST00000554686.5	1859	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	14.8652348320358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTTAAAATAAATCATTG	88823672	True	NA	-16	True	ATTAAA	-21	NA	88824738	88877956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88877293
transcript_30260.known	chr14	+	490	2	FSM	ENSG00000283627.1	ENST00000637466.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTAGACTTGATG	NA	False	NA	NA	False	ACTAAA	-14	NA	89013385	89025807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_89013560_89025491
transcript_30267.known	chr14	-	2716	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	49.8397431775084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGCTGGGCGTGGTGGC	-89951751	False	NA	NA	False	AATACA	-14	NA	89954557	89795146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_30268.known	chr14	-	3136	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	9.48683298050514	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATCAATGGTATCATTG	-89951924	True	NA	NA	False	AATAAA	-20	NA	89954730	89794668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_30269.nnic	chr14	-	663	6	NNC	ENSG00000140025.16	novel	568	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	48.6481243214988	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTAATTTTTGTG	-89951929	True	NA	-16	True	ATTAAA	-6	NA	89954735	89797136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954595
transcript_30270.known	chr14	-	1856	6	FSM	ENSG00000140025.16	ENST00000556005.1	1856	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	62.2626693934656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTTCACATGTGATAT	-89951717	False	NA	NA	False	NA	NA	NA	89954523	89923325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_30271.known	chr14	-	1870	6	FSM	ENSG00000140025.16	ENST00000538485.6	1870	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	50.5750926840476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAATAAAACTGTACT	-89951944	False	NA	NA	False	NA	NA	NA	89954750	89923307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_30278.known	chr14	+	3722	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	118.580141676421	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	89950090	True	NA	18	True	AATAAA	-18	NA	89955926	90044764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_30282.known	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	79.1773255982348	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	89950101	True	NA	7	True	AATAAA	-19	NA	89955937	90043344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_3029.known	chr1	-	1156	8	FSM	ENSG00000043514.17	ENST00000495175.6	1156	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	40.2380670611341	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACCATTTTCTTTTG	-39880758	True	NA	NA	False	NA	NA	NA	39883511	39841625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39883317
transcript_30300.nic	chr14	+	1483	2	ISM	ENSG00000042088.14	ENST00000554180.5	910	7	-14	16075	-9	913	5prime_fragment	FALSE	canonical	3	187	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGATTTTTTTCCTGTC	89950056	True	NA	NA	False	AATAAA	-15	NA	89955892	89964512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_89955971_89963107
transcript_30302.known	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	5.92757072286415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	-90330602	True	NA	-6	True	AATAAA	-14	NA	90331941	90267859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
transcript_30306.known	chr14	+	4390	11	FSM	ENSG00000100764.14	ENST00000261303.13	4390	11	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	274.025546254359	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCAGTATTGCCTTTT	90241228	True	NA	NA	False	ATTAAA	-18	NA	90256552	90275429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_30314.known	chr14	+	1389	10	FSM	ENSG00000100764.14	ENST00000543772.2	1389	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	616.511772338614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCCCATTGGGTGGCC	90241253	True	NA	NA	False	AAAACA	-27	NA	90256577	90272550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90256601_90259159_90259214_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_3032.nnic	chr1	-	1583	7	NIC	ENSG00000043514.17	novel	1156	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_6	50.3587132480567	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880753	True	NA	-24	True	AATAAA	-17	NA	39883506	39841050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39883317
transcript_30323.known	chr14	-	580	4	FSM	ENSG00000119720.18	ENST00000557106.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.5193489244852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCGAAGTAGGTTGCTG	-90330630	True	NA	NA	False	AGTAAA	-12	NA	90331969	90316586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90316812_90317703_90317821_90318004_90318114_90331840
transcript_30326.known	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	3680.97381438964	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	90321617	True	NA	-19	True	NA	NA	NA	90397028	90405072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_30338.known	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	7896	junction_5	449.510222353174	3153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	90321617	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_30342.known	chr14	+	877	6	FSM	ENSG00000198668.14	ENST00000553542.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	3312.26224807155	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACAGTCAGGCCTTTG	90321644	True	NA	-43	True	AATACA	-43	NA	90397055	90405048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397155_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_30345.known	chr14	+	1420	5	FSM	ENSG00000198668.14	ENST00000553630.1	1420	5	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_3	3719.32984555014	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAGTGGTGTTAAATG	90321628	True	NA	57	True	AATAAA	-11	NA	90397039	90405603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90404378_90404515_90404688
transcript_30347.known	chr14	-	26829	17	FSM	ENSG00000100784.12	ENST00000614987.5	26829	17	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_6	4.7169905660283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTTGGACTTGTGG	-91060095	True	NA	NA	False	AATAAA	-24	NA	91060641	90847860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_30349.known	chr14	-	2249	13	FSM	ENSG00000100784.12	ENST00000418736.6	2249	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5.23542951649836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAGAGTTGTCTTGG	-91060054	True	NA	NA	False	AATAAA	-24	NA	91060600	90893973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_30353.known	chr14	+	2957	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	18.9146322620734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	91113578	True	NA	NA	False	CATAAA	-21	NA	91114072	91225632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_30354.nic	chr14	+	2622	14	NIC	ENSG00000133943.21	novel	2764	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999639197258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91113589	True	NA	23	True	AATAAA	-19	NA	91114375	91225355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_30356.known	chr14	+	2538	14	FSM	ENSG00000133943.21	ENST00000428926.6	2538	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.7253701934239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTCTTCGGAA	91113655	False	NA	20	True	AATAAA	-16	NA	91114441	91225352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_30359.known	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	7.2738635475991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	-91836065	True	NA	-1	True	AATAAA	-31	NA	91836447	91780954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_3036.known	chr1	-	545	4	FSM	ENSG00000043514.17	ENST00000541099.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	69.8442712197802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATCCAGTTCAGGAG	-39880681	True	NA	NA	False	NA	NA	NA	39883434	39841713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39883317
transcript_30362.known	chr14	-	1770	11	FSM	ENSG00000165929.13	ENST00000556018.5	1770	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	24.9889975789346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCAACCATAGATAG	NA	False	NA	-18	True	AATAAA	-15	NA	91836526	91782822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_30364.known	chr14	-	2625	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.85227205685164	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTGGTTCATTTT	-91947497	True	NA	-1	True	ATTAAA	-13	NA	91947694	91869410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
transcript_30369.known	chr14	-	769	3	FSM	ENSG00000100815.12	ENST00000555105.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	31.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACATGCCTGTAATCCC	-92036895	True	NA	NA	False	AATACA	-18	NA	92040017	92030540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92030777_92033191_92033254_92039546
transcript_3037.nnic	chr1	-	1170	3	NIC	ENSG00000043514.17	novel	2034	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	72.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880753	True	NA	-24	True	AATAAA	-17	NA	39883506	39841050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_39841914_39844100_39844219_39883317
transcript_30370.known	chr14	-	6950	12	FSM	ENSG00000066427.25	ENST00000545170.5	6950	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1963835701029	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102995	True	NA	-10	True	AATAAA	-20	NA	92106621	92058551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080540_92080568_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30375.known	chr14	-	6884	11	FSM	ENSG00000066427.25	ENST00000644486.2	6884	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	41.9238595551507	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102956	True	NA	-10	True	AATAAA	-20	NA	92106582	92058551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_3038.known	chr1	+	2129	14	FSM	ENSG00000168389.18	ENST00000372811.10	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	8.29771480625342	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTTTCTGTCTGTG	39953142	True	NA	12	True	CATAAA	-13	NA	39955144	39969956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_30385.known	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	78.7204775153639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102984	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_30386.known	chr14	-	2572	10	FSM	ENSG00000066427.25	ENST00000359366.10	2572	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	74.5755065208377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAAAAATATCTTTT	-92102964	True	NA	NA	False	NA	NA	NA	92106590	92062785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096138_92096673_92096839_92106528
transcript_30389.known	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	1	18	junction_8	70.427267446636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102974	True	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
transcript_30391.known	chr14	-	1010	10	FSM	ENSG00000066427.25	ENST00000554592.5	1010	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_8	78.3464921965634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTGCTCACCATTC	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096135_92096673_92096839_92106528
transcript_30392.known	chr14	-	1022	10	FSM	ENSG00000066427.25	ENST00000553309.5	1022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9982589232717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30393.known	chr14	-	6713	9	FSM	ENSG00000066427.25	ENST00000429774.6	6713	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	79.4369836725942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102995	True	NA	-10	True	AATAAA	-20	NA	92106621	92058551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92106528
transcript_30397.known	chr14	-	6770	9	FSM	ENSG00000066427.25	ENST00000393287.9	6770	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	80.0327081573528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102995	True	NA	-10	True	AATAAA	-20	NA	92106621	92058551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92096092_92096138_92096673_92096839_92106528
transcript_30399.known	chr14	-	848	9	FSM	ENSG00000066427.25	ENST00000556315.6	848	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	90.6151718808721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGACCTATCAGGACAGAG	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92071010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096135_92096673_92096839_92106528
transcript_304.known	chr1	+	6616	5	FSM	ENSG00000228794.11	ENST00000445118.7	6616	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	12.2983738762488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATGACTATATAACAT	826887	True	NA	NA	False	AATAAA	-19	NA	827597	859446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390
transcript_30401.known	chr14	-	857	8	FSM	ENSG00000066427.25	ENST00000553491.5	857	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	81.8856843784214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92096092_92096138_92096673_92096839_92106528
transcript_30402.nnic	chr14	-	951	7	NNC	ENSG00000066427.25	novel	591	6	NA	NA	-21	658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.040075801838	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATGCATTTTTATTCT	-92103016	True	NA	-4	True	AATAAA	-15	NA	92106642	92089720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_92090006_92090378_92090568_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30404.known	chr14	-	591	6	FSM	ENSG00000066427.25	ENST00000511362.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	93.9093179615314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCATGTAGGGAGGCTG	-92102941	True	NA	NA	False	GATAAA	-43	NA	92106567	92090378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92090568_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30412.known	chr14	-	454	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1243.50374167332	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTCTTTTCATACAAAG	-92108475	True	NA	-3	True	AATAAA	-20	NA	92121724	92116121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
transcript_30415.known	chr14	-	417	3	FSM	ENSG00000183648.11	ENST00000617122.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	2463	junction_2	100	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	-92121797	False	NA	-7	True	AATAAA	-16	NA	92121809	92116125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92116230_92117497_92117643_92121641
transcript_30418.known	chr14	+	13003	16	FSM	ENSG00000165934.13	ENST00000298875.9	13003	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.593495612497	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGACTGTGTATAGT	92117922	True	NA	1	True	AATAAA	-16	NA	92121968	92172145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357_92154459_92155122_92155324_92156478_92156632_92157658_92157885_92158982_92159283_92161111_92161247_92161651
transcript_30427.known	chr14	-	1980	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_3	51.6643697396157	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-92745152	True	NA	-14	True	AATAAA	-21	NA	92748627	92703808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30429.known	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	137.562006221033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	-92745170	True	NA	-44	True	NA	NA	NA	92748645	92703838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30430.nnic	chr14	-	1953	13	NIC	ENSG00000100600.15	novel	1980	14	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	132.898143954935	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-92745193	True	NA	-14	True	AATAAA	-21	NA	92748668	92703808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_92704362_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30431.known	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	138.176435301853	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	-92745137	True	NA	-12	True	AATAAA	-23	NA	92748612	92703806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30437.known	chr14	+	2879	13	FSM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	18.6607133363712	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	92790545	True	NA	NA	False	AATAAA	-14	NA	92794304	92839947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92837385_92837450_92839365
transcript_30446.nic	chr14	+	1287	2	ISM	ENSG00000066455.13	ENST00000163416.7	2879	13	-91	41496	-91	-12252	5prime_fragment	FALSE	canonical	3	248	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTTGAAGAGTTGAAG	92794200	True	NA	NA	False	AATAAA	-21	NA	92794213	92798451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_92794457_92797407
transcript_30447.nnic	chr14	+	1808	2	NNC	ENSG00000066455.13	novel	2879	13	NA	NA	-70	-12247	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGAGTTGAAGGCATT	92794165	False	NA	NA	False	AATAAA	-26	NA	92794234	92798456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_92794994_92797407
transcript_30448.known	chr14	+	1985	8	FSM	ENSG00000100604.13	ENST00000216492.10	1985	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	18.2208671582886	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAATTTTTTCGCCTC	NA	False	NA	15	True	AATAAA	-18	NA	92923149	92935285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_92923406_92924198_92924246_92926604_92926699_92927549_92927619_92929716_92929816_92931249_92931703_92932369_92932852_92934800
transcript_30449.known	chr14	-	2407	3	FSM	ENSG00000165943.5	ENST00000298894.5	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-93184012	True	NA	-22	True	AATAAA	-16	NA	93184897	93182198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93184363_93184558_93184714_93184809
transcript_30450.known	chr14	-	2529	2	FSM	ENSG00000165943.5	ENST00000556883.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-93184038	True	NA	-22	True	AATAAA	-16	NA	93184923	93182198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93184363_93184558
transcript_30451.known	chr14	+	3494	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	18.3847763108502	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	NA	False	NA	19	True	AATAAA	-15	NA	93207255	93229215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_30455.nic	chr14	+	1322	10	NIC	ENSG00000012963.15	novel	3494	11	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_3	84.2194370691642	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	NA	False	NA	21	True	AATAAA	-22	NA	93207234	93227118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_93207442_93209823_93209958_93210647_93210709_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_30456.known	chr14	+	1276	10	FSM	ENSG00000012963.15	ENST00000553674.1	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	88.1564266265118	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	NA	False	NA	21	True	AATAAA	-22	NA	93207242	93227118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93207442_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_30460.known	chr14	+	909	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	93183358	True	NA	7	True	CATAAA	-18	NA	93184950	93187086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93185033_93186259
transcript_30461.known	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	93183724	False	NA	NA	False	AATACA	-18	NA	93185316	93188463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93185486_93186259
transcript_30462.known	chr14	-	1125	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTTTCTT	NA	False	NA	-3	True	AATATA	-14	NA	93207065	93202893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93203783_93206829
transcript_30463.known	chr14	-	398	2	FSM	ENSG00000170270.5	ENST00000556566.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTTCTTGAGAAATAA	NA	False	NA	NA	False	AATAAA	-2	NA	93207029	93203505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93203783_93206908
transcript_30464.known	chr14	-	2621	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.0184900284226	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	93333092	93287627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
transcript_30465.nic	chr14	+	1471	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210803	-368	-549	0	3prime_fragment	FALSE	canonical	2	5	junction_1	4.38178046004133	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	93688443	93707272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_30467.known	chr14	-	2168	3	FSM	ENSG00000100628.12	ENST00000553883.1	2168	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGCCCAGTGAAGTCC	NA	False	NA	-8	True	AATAAA	-14	NA	93940495	93934166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93934793_93937697_93937852_93939107
transcript_30468.known	chr14	-	2769	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	245.973544055047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTAAACTTGATTTC	-94072811	True	NA	19	True	NA	NA	NA	94081202	94050964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
transcript_30469.known	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_8	78.8336856933633	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	-94072811	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_30473.known	chr14	-	2214	8	FSM	ENSG00000089737.18	ENST00000544005.5	2214	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	263.137505762245	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTGTGTCATCCTGAT	-94072811	True	NA	-20	True	ATTAAA	-13	NA	94081202	94050922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94081118
transcript_30481.known	chr14	-	810	2	FSM	ENSG00000089737.18	ENST00000555324.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGATAATTGGGAGAGA	-94072755	True	NA	NA	False	NA	NA	NA	94081146	94078965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94079748_94081118
transcript_30485.known	chr14	+	615	6	FSM	ENSG00000165948.11	ENST00000554166.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.5395874626624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGGCTGGGTTCACCC	94080324	True	NA	NA	False	GGGGCT	-19	NA	94081355	94102536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94101976_94102476
transcript_30487.known	chr14	+	629	6	FSM	ENSG00000165948.11	ENST00000555341.5	629	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	57.5951386837466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTTCACCCCCTTC	94080343	True	NA	NA	False	GGGGCT	-24	NA	94081374	94102541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096855_94096966_94097494_94097679_94100738_94100772_94101813_94101976_94102476
transcript_3049.known	chr1	+	2592	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	620.95777276362	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	40000161	True	NA	17	True	AATAAA	-10	NA	40040752	40072641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_30493.known	chr14	+	647	5	FSM	ENSG00000165948.11	ENST00000555523.6	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.3507493035026	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080278	True	NA	22	True	AATAAA	-17	NA	94081309	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_30494.nic	chr14	+	770	5	NIC	ENSG00000165948.11	novel	647	5	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	61.2107016787097	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081270	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94102060_94102476
transcript_30496.nic	chr14	+	689	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	40.7944542799631	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081298	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94101976_94102476
transcript_30497.nic	chr14	+	710	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	63.5270611629406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080330	True	NA	22	True	AATAAA	-17	NA	94081361	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94102060_94102476
transcript_30499.known	chr14	+	674	5	FSM	ENSG00000165948.11	ENST00000393115.7	674	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8540051933062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080297	True	NA	22	True	AATAAA	-17	NA	94081328	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096840_94096966_94100738_94100772_94101813_94101976_94102476
transcript_30502.known	chr14	+	413	4	FSM	ENSG00000165948.11	ENST00000557218.5	413	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	70.8864506721058	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080350	True	NA	22	True	AATAAA	-17	NA	94081381	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94102476
transcript_30503.nnic	chr14	+	653	4	NIC	ENSG00000165948.11	novel	647	5	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	53.7959106252511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081270	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096886_94096966_94101813_94101976_94102476
transcript_30505.nic	chr14	+	527	4	NIC	ENSG00000165948.11	novel	580	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	69.9348903544496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081298	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94102476
transcript_30507.known	chr14	+	828	3	FSM	ENSG00000165948.11	ENST00000557600.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTGGAGATTTTGGG	94080279	True	NA	NA	False	AAAACA	-36	NA	94081310	94101348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94100738
transcript_30510.known	chr14	+	406	3	FSM	ENSG00000165948.11	ENST00000554544.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	28	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080355	True	NA	22	True	AATAAA	-17	NA	94081386	94102709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096855_94096966_94102476
transcript_30515.known	chr14	-	451	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	45.7626728046147	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-94126072	True	NA	-10	True	AATAAA	-18	NA	94129604	94127780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
transcript_30518.known	chr14	-	938	2	FSM	ENSG00000119632.4	ENST00000556552.1	938	2	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCCTTCTGAGTGA	-94126048	True	NA	NA	False	NA	NA	NA	94129580	94128376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94129292_94129557
transcript_30519.known	chr14	-	516	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	14	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGCTTCTTGCA	-94125869	False	NA	-8	True	AATAAA	-20	NA	94129401	94127778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94127993_94128513_94128676_94129261
transcript_30520.known	chr14	+	2278	6	FSM	ENSG00000188488.14	ENST00000329597.12	2278	6	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_3	2.41660919471891	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAACTGTCTTTATGGA	94581273	True	NA	9	True	AATAAA	-18	NA	94581425	94593118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94581491_94581614_94581711_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_30521.nic	chr14	+	734	5	NIC	ENSG00000235706.9	novel	817	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	10.7558123821495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95157017	True	NA	10	True	AATAAA	-23	NA	95157644	95179933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_95157859_95158192_95158235_95158875_95159036_95179498_95179634_95179750
transcript_30523.known	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	2	14	junction_3	4.02768199119819	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157132	True	NA	2	True	AATAAA	-15	NA	95157759	95179925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
transcript_30528.known	chr14	+	1246	3	FSM	ENSG00000235706.9	ENST00000654147.2	1485	3	239	0	234	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAAAATTCAAATACAG	95157291	False	NA	NA	False	NA	NA	NA	95157918	95180268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95158235_95158875_95159036_95179498
transcript_30529.known	chr14	+	1709	3	FSM	ENSG00000235706.9	ENST00000554631.2	1709	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95157017	True	NA	10	True	AATAAA	-23	NA	95157644	95179933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95159036_95179498_95179634_95179750
transcript_3053.known	chr1	+	2964	13	FSM	ENSG00000131236.18	ENST00000372802.5	2964	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	791.309160505551	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGCAACTTTTTTTT	40040218	True	NA	-78	True	NA	NA	NA	40040239	40072515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40040784_40059333_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_30530.known	chr14	+	650	2	FSM	ENSG00000235706.9	ENST00000661445.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTTGGGCTGTCAC	95158191	False	NA	8	True	AATAAA	-21	NA	95158818	95179931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95159036_95179498
transcript_30533.known	chr14	+	1103	2	FSM	ENSG00000182512.5	ENST00000331334.5	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTCGAGCCCTGGTCT	95516659	True	NA	14	True	ATTAAA	-14	NA	95535049	95544714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95535385_95543946
transcript_30536.known	chr14	-	981	2	FSM	ENSG00000247092.8	ENST00000554169.2	1375	2	394	0	-10	0	multi-exon	FALSE	canonical	3	99	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGGATCAGTAACAAA	-95534231	False	NA	NA	False	NA	NA	NA	95534245	95532633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95533062_95533692
transcript_30537.known	chr14	-	221	2	FSM	ENSG00000247092.8	ENST00000555866.5	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	-95532640	True	NA	-34	True	ATTAAA	-14	NA	95534586	95532913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95533062_95534513
transcript_30539.known	chr14	-	428	2	FSM	ENSG00000247092.8	ENST00000553559.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	-95534858	False	NA	-34	True	ATTAAA	-14	NA	95534872	95532913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95533062_95534592
transcript_30541.known	chr14	-	275	1	FSM	ENSG00000252481.1	ENST00000516672.1	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTTTTTTTAAACT	-95533615	False	NA	-2	True	NA	NA	NA	95533629	95533354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95533400_95533600
transcript_30542.known	chr14	+	1142	4	FSM	ENSG00000213231.13	ENST00000340722.8	1142	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.85861230093008	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	95685762	True	NA	18	True	ATTAAA	-18	NA	95686425	95692628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95686630_95690735_95690907_95691267_95691337_95691930
transcript_30543.known	chr14	+	1724	3	FSM	ENSG00000213231.13	ENST00000464815.5	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	95685774	True	NA	18	True	ATTAAA	-18	NA	95686437	95692628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95686630_95690735_95690907_95691267
transcript_30545.known	chr14	-	1391	4	FSM	ENSG00000100721.11	ENST00000554012.5	1391	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	5.90668171555645	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTCCTTTGGA	-95714062	True	NA	89	True	AATAAA	-14	NA	95714196	95709966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95710882_95711753_95711803_95712219_95712397_95713946
transcript_30546.known	chr14	+	7627	2	FSM	ENSG00000227051.7	ENST00000555004.3	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGATGCTTTTCC	96038586	True	NA	95	True	TTTAAA	-21	NA	96039361	96093971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96039528_96086510
transcript_30548.known	chr14	+	760	4	FSM	ENSG00000100744.15	ENST00000554182.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	53.8227543785051	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTTCATATAATATCT	96359839	True	NA	NA	False	NA	NA	NA	96363525	96385912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96363569_96379687_96379756_96382246_96382506_96385522
transcript_30550.nic	chr14	+	2501	18	NIC	ENSG00000140057.9	novel	3283	18	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	7.09549298930283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGACTTGTCTTTTTTT	96391586	True	NA	NA	False	AATACA	-28	NA	96392104	96488275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96487957
transcript_30551.known	chr14	+	3283	18	FSM	ENSG00000140057.9	ENST00000267584.9	3283	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_13	5.81550248939438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTCTGGCTTCTTTC	96391609	True	NA	12	True	AATAAA	-19	NA	96392127	96489427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96488304
transcript_30555.known	chr14	+	601	3	FSM	ENSG00000140057.9	ENST00000556643.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAATGAAGGCCGGCA	96391625	True	NA	NA	False	AATAGA	-15	NA	96392143	96405052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96392260_96398074_96398264_96404756
transcript_30557.known	chr14	+	1345	2	FSM	ENSG00000140057.9	ENST00000555570.1	1345	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGCATCCCCTCCAGAC	96391614	True	NA	NA	False	AATAAA	-16	NA	96392132	96399292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96392260_96398074
transcript_30558.known	chr14	+	4515	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	501.608379103055	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	96471607	True	NA	18	True	AATAAA	-21	NA	96502381	96567116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_30562.known	chr14	+	2173	12	FSM	ENSG00000090060.19	ENST00000618976.2	2173	12	0	0	0	0	multi-exon	TRUE	canonical	3	1208	junction_9	433.255617103883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTCTCTGTGTTTT	96471601	True	NA	0	True	ATTAAA	-18	NA	96502375	96537901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975
transcript_30567.known	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	96.8836286479816	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	96471626	True	NA	NA	False	AATAAA	-9	NA	96502400	96534885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
transcript_30569.known	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	101.167764958344	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	96471666	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
transcript_30571.known	chr14	+	1580	14	FSM	ENSG00000100749.9	ENST00000681538.1	1580	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	399.095930986746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATTTGAAAATCT	96789148	True	NA	18	True	ATTAAA	-7	NA	96797381	96881391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96858892_96859028_96860556_96860736_96876029_96876121_96881176
transcript_30572.known	chr14	+	1816	14	FSM	ENSG00000100749.9	ENST00000553683.2	1816	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	384.655121024246	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGGCTGTAAGGTT	96789070	True	NA	15	True	AATAAA	-30	NA	96797303	96881612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877501_96877574_96881176
transcript_30575.known	chr14	+	1719	14	FSM	ENSG00000100749.9	ENST00000681355.1	1719	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	395.326903899476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAGAGTGGATAAAAAT	96789179	True	NA	-81	True	NA	NA	NA	96797412	96881516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96832430_96832611_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_30582.known	chr14	+	1682	13	FSM	ENSG00000100749.9	ENST00000680683.1	1682	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	308.836796166951	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTATGTTGTGGCTG	96789146	True	NA	8	True	AATAAA	-23	NA	96797379	96881605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881155
transcript_30584.known	chr14	+	1634	13	FSM	ENSG00000100749.9	ENST00000680849.1	1634	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	303.93213560852	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	96789171	True	NA	9	True	AATAAA	-24	NA	96797404	96881606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837815_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_30586.known	chr14	+	1681	13	FSM	ENSG00000100749.9	ENST00000679758.1	1681	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	405.311368648297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTCATTTCAAAATAAT	96789140	True	NA	NA	False	AAAAAG	-15	NA	96797373	96945418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96943516_96943681_96945048
transcript_30587.known	chr14	+	1435	13	FSM	ENSG00000100749.9	ENST00000680538.1	1435	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	308.787098535904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCAGGTTATACT	96789080	True	NA	30	True	ATTAAA	-19	NA	96797313	96881403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860646_96860736_96876029_96876121_96881176
transcript_30591.known	chr14	+	1823	12	FSM	ENSG00000100749.9	ENST00000681419.1	1823	12	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	83.9485281103893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAAGGAATTAAAGCT	96789158	True	NA	NA	False	TATAAA	-35	NA	96797391	96876723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029
transcript_30593.known	chr14	+	6456	12	FSM	ENSG00000100749.9	ENST00000681524.1	6456	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	317.940947789038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTTTGTGATGCCTGC	96789113	True	NA	NA	False	AATAAA	-24	NA	96797346	96886488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_30595.known	chr14	+	1520	12	FSM	ENSG00000100749.9	ENST00000680922.1	1520	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	484.960371559853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAACA	96789153	True	NA	NA	False	AAGAAA	-23	NA	96797386	96945391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96943516_96943681_96945048
transcript_306.known	chr1	-	1317	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTCACCTTTTA	-827084	True	NA	-12	True	AATAAA	-14	NA	827522	826205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_826200_827500
transcript_30601.known	chr14	+	1070	11	FSM	ENSG00000100749.9	ENST00000680348.1	1070	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	421.595256140294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACCTCAGTGTTGTGGA	96789161	True	NA	NA	False	ACTAAA	-29	NA	96797394	96860681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852836_96852944_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_30605.known	chr14	+	1202	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	343.595297399516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	96789151	True	NA	NA	False	AATAAA	-18	NA	96797384	96860922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_30609.known	chr14	+	1444	13	FSM	ENSG00000100749.9	ENST00000679903.1	1444	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	303.93213560852	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCAGGTTATACTCC	96789154	True	NA	32	True	ATTAAA	-21	NA	96797387	96881405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876038_96876121_96881176
transcript_30610.known	chr14	+	1130	11	FSM	ENSG00000100749.9	ENST00000680509.1	1130	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.109678743293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTTGTTATTAAATT	96789143	True	NA	NA	False	AAAACA	-10	NA	96797376	96860735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797434_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_30611.known	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_8	29.2759856082307	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	-99475858	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_30617.known	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	109.399425844014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	-99475787	True	NA	1	True	AATAAA	-18	NA	99480788	99409803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_30620.known	chr14	+	1547	3	FSM	ENSG00000196405.13	ENST00000555848.1	1547	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGCTCAGGCCCTC	NA	False	NA	12	True	AATAAA	-16	NA	100140292	100144235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100141247_100141735_100141794_100143700
transcript_30621.known	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	19.1702895126808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	100236209	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_30622.known	chr14	+	2742	1	FSM	ENSG00000100811.14	ENST00000623799.1	2742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATGGCAGAACAAGATC	100275717	False	NA	5	True	AATAAA	-19	NA	100275728	100278470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100275700_100278500
transcript_30624.known	chr14	+	1923	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	32.5802428201851	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374972	True	NA	36	True	AATAAA	-36	NA	100376484	100530303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_30625.known	chr14	+	2123	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.9282949202249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374981	True	NA	36	True	AATAAA	-36	NA	100376493	100530303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_30627.known	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	42.9138672226123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	100376404	False	NA	NA	False	NA	NA	NA	100376417	100529855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_30637.known	chr14	-	3092	11	FSM	ENSG00000140105.18	ENST00000355338.6	3092	11	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_10	132.76957482797	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	NA	False	NA	-36	True	NA	NA	NA	100376805	100333817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100376259
transcript_30644.known	chr14	-	2690	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	261.118581453421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACCCAGTAGAGTAAAT	-100361893	False	NA	-46	True	NA	NA	NA	100375608	100333827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
transcript_30645.known	chr14	-	2466	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	208.457829468376	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTCCTGCTCTTGTC	-100362620	True	NA	-20	True	AATAAA	-4	NA	100376335	100333801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
transcript_30652.known	chr14	-	2639	11	FSM	ENSG00000140105.18	ENST00000392882.7	2639	11	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_10	206.528061047403	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCATTGTGCTCTGT	-100361632	False	NA	-8	True	AATAAA	-16	NA	100375347	100333789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
transcript_3066.known	chr1	-	2368	10	FSM	ENSG00000131238.18	ENST00000641471.1	2368	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	653.952163463632	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTTTCAGTATTTT	-40082194	True	NA	-15	True	AATAAA	-16	NA	40097247	40072709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40093932_40094020_40097114
transcript_30673.known	chr14	+	1712	8	FSM	ENSG00000214548.18	ENST00000554639.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	590.65936866854	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100826009	True	NA	NA	False	AATAAA	-24	NA	100826131	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100835738_100835880_100836166_100836301_100845457_100845534_100860690
transcript_30687.nic	chr14	+	1600	7	NIC	ENSG00000214548.18	novel	1694	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_3	594.713282926226	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825993	True	NA	NA	False	AATAAA	-24	NA	100826115	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_100826218_100828707_100828817_100829033_100829750_100830967_100831095_100836166_100836301_100845457_100845534_100860690
transcript_30688.nic	chr14	+	1552	7	NIC	ENSG00000214548.18	novel	1694	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_4	581.151634448551	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825993	True	NA	NA	False	AATAAA	-24	NA	100826115	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_100826218_100828707_100828817_100829033_100829750_100831015_100831095_100836166_100836301_100845457_100845534_100860690
transcript_3069.known	chr1	-	2267	9	FSM	ENSG00000131238.18	ENST00000433473.8	2267	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	525.556609700611	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-40082199	True	NA	-31	True	NA	NA	NA	40097252	40072725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092505_40097114
transcript_30690.known	chr14	+	1582	7	FSM	ENSG00000214548.18	ENST00000451743.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	544.384591381253	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTGCTACTAATATAAG	100826003	True	NA	NA	False	AATAAA	-29	NA	100826125	100861031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_30691.known	chr14	+	1608	7	FSM	ENSG00000214548.18	ENST00000429159.6	1608	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	550.145056629007	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATGGATGTGCTACT	100825985	True	NA	NA	False	AATAAA	-21	NA	100826107	100861023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100832511_100832642_100836166_100836301_100845457_100845534_100860690
transcript_30697.known	chr14	+	1643	7	FSM	ENSG00000214548.18	ENST00000648456.1	1643	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	580.378731710787	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	100826097	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829788_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_30698.known	chr14	+	1426	6	FSM	ENSG00000214548.18	ENST00000521404.5	1426	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	478.10668265566	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCTCAATAAATGTGTT	100826003	True	NA	NA	False	NA	NA	NA	100826125	100860989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100836166_100836301_100845457_100845534_100860690
transcript_30699.nnic	chr14	+	1511	6	NIC	ENSG00000214548.18	novel	1643	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_3	525.475632165755	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825993	True	NA	NA	False	AATAAA	-24	NA	100826115	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_100826218_100828707_100828817_100829033_100829788_100836166_100836301_100845457_100845534_100860690
transcript_3070.known	chr1	-	2340	9	FSM	ENSG00000131238.18	ENST00000530704.6	2340	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	537.675886919806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-40082199	True	NA	-31	True	NA	NA	NA	40097252	40072725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089583_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_30700.known	chr14	+	4504	3	FSM	ENSG00000214548.18	ENST00000452120.7	4504	3	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	69	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACTGCAACCTCTGCC	100825995	True	NA	NA	False	NA	NA	NA	100826117	100833328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033
transcript_30702.known	chr14	+	1760	9	FSM	ENSG00000214548.18	ENST00000519709.6	1760	9	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_5	568.827027750968	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100835738_100835880_100836041_100836076_100836166_100836301_100845457_100845534_100860690
transcript_30703.known	chr14	+	1694	8	FSM	ENSG00000214548.18	ENST00000412736.7	1694	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	606.162973976808	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831015_100831095_100835735_100835880_100836166_100836301_100845457_100845534_100860690
transcript_30705.known	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	TRUE	canonical	3	346	junction_1	43.9573422067838	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	101807785	True	NA	13	True	AATAAA	-22	NA	101809894	101912625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_30706.known	chr14	+	735	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTTTAAATCCTAAG	101807725	True	NA	NA	False	ATTAAA	-19	NA	101809834	101836701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101810037_101836168
transcript_30707.known	chr14	-	448	2	FSM	ENSG00000259088.1	ENST00000554859.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGGGCTGAAGCTAGA	-101810249	True	NA	NA	False	NA	NA	NA	101810321	101796554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_101796898_101810216
transcript_30708.known	chr14	+	1079	1	FSM	ENSG00000271780.1	ENST00000607414.1	1079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTTGAATAAGTGAT	101948116	True	NA	89	True	ATTAAA	-36	NA	101948346	101949425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101948300_101949400
transcript_30709.nic	chr14	+	1502	7	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-59	21211	-59	-6133	5prime_fragment	FALSE	canonical	3	81	junction_4	15.7550697307953	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAATCTGAAGATG	101945638	True	NA	NA	False	AAGAAA	-3	NA	101964513	101983472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381
transcript_30712.known	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	1445.54983676749	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-102139181	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
transcript_3072.known	chr1	-	2195	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	549.343950098847	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-40082199	True	NA	-34	True	NA	NA	NA	40097252	40072728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_30727.known	chr14	-	3228	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_10	505.282732734852	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTGTCTCAAAGTTC	-101959874	True	NA	-5	True	AATACA	-19	NA	102087044	102080741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_3073.known	chr1	-	1957	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	627.032885899934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-40082207	True	NA	-43	True	NA	NA	NA	40097260	40072737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
transcript_30738.nic	chr14	-	1858	9	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-134	2382	-134	318	5prime_fragment	FALSE	canonical	3	2947	junction_8	440.015606967526	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAAAGAAGCAGGA	-102087162	False	NA	3	True	NA	NA	NA	102087178	102083123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_3074.known	chr1	-	2253	9	FSM	ENSG00000131238.18	ENST00000641691.1	2253	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	524.567664248379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-40082201	True	NA	-43	True	NA	NA	NA	40097254	40072737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092501_40097114
transcript_3075.known	chr1	+	6232	8	FSM	ENSG00000117000.9	ENST00000372771.5	6232	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	21.2362800847214	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	40156794	True	NA	7	True	AATAAA	-18	NA	40161386	40240921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40231516_40231659_40235791
transcript_30754.nic	chr14	-	922	5	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-134	4191	-134	0	5prime_fragment	FALSE	canonical	3	2947	junction_4	240.547682383348	4701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAGAAGAGAA	-102087162	False	NA	-133	True	AAGAAA	-18	NA	102087178	102084932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_30757.known	chr14	+	2067	4	FSM	ENSG00000140153.18	ENST00000454394.2	2067	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	52.8540968663315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGCGCTCCTGTATTAG	102137003	True	NA	-97	True	NA	NA	NA	102139913	102210134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102194937_102195121_102197754_102197848_102208602
transcript_30758.known	chr14	+	2616	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	26.5497436689865	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	102136933	True	NA	8	True	ATTAAA	-16	NA	102139843	102223673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
transcript_30769.known	chr14	+	2384	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	11	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	102136986	True	NA	18	True	AATAAA	-18	NA	102139896	102210527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102194937_102195121_102208602
transcript_30774.known	chr14	+	785	3	FSM	ENSG00000140153.18	ENST00000556094.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACGCTGCAATCACAG	102137004	True	NA	NA	False	NA	NA	NA	102139914	102223358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102139988_102194937_102195121_102222829
transcript_30775.known	chr14	+	2382	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	102136982	True	NA	6	True	ATTAAA	-14	NA	102139892	102223671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102208602_102209863_102222829
transcript_30776.known	chr14	+	2198	3	FSM	ENSG00000140153.18	ENST00000299135.6	2198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGTAGCACTTTG	102137000	True	NA	16	True	AATAAA	-16	NA	102139910	102210525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102193462_102193476_102208602
transcript_30781.known	chr14	-	4270	6	FSM	ENSG00000100865.15	ENST00000559514.5	4270	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	175.10065676633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACAGTGTGCTTTTTTTT	-102359138	False	NA	NA	False	ATTAAA	-20	NA	102362916	102341101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102344390_102348278_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_30784.known	chr14	-	953	5	FSM	ENSG00000100865.15	ENST00000216756.11	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	23.8170107276291	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTGATCTAGTTTC	-102359112	True	NA	-2	True	AGTAAA	-23	NA	102362890	102348281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_30786.known	chr14	-	572	4	FSM	ENSG00000100865.15	ENST00000541568.6	572	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	204.364054243075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGTCTGCCTAGGAC	-102359090	True	NA	NA	False	NA	NA	NA	102362868	102348510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102348760_102355767_102355898_102359418_102359588_102362844
transcript_30789.known	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	235.608689452351	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	103312236	True	NA	10	True	AATAAA	-22	NA	103334236	103345025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_3079.known	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-40257163	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40256400_40258000
transcript_30794.nic	chr14	+	1887	11	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	612.600652954272	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATGTTTGGCTCTGAA	103312181	True	NA	9	True	AATAAA	-20	NA	103334181	103341356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_30796.nic	chr14	+	958	7	ISM	ENSG00000100664.11	ENST00000216554.8	5710	12	-56	6677	-8	0	5prime_fragment	FALSE	canonical	3	1325	junction_1	285.194913855224	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	103312180	True	NA	NA	False	NA	NA	NA	103334180	103338348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_30799.nic	chr14	+	748	6	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	811.863929485724	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	103312181	True	NA	NA	False	NA	NA	NA	103334181	103338348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_308.known	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	TRUE	canonical	3	1103	junction_1	245.869658333209	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	-940507	True	NA	-14	True	AATAAA	-29	NA	959256	944202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_30803.known	chr14	-	1420	8	FSM	ENSG00000166165.14	ENST00000348956.7	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_7	276.78968660744	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	-103455284	True	NA	-9	True	AATAAA	-19	NA	103522830	103519666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022_103522178_103522300_103522506_103522765
transcript_30804.nic	chr14	-	1242	6	ISM	ENSG00000166165.14	ENST00000348956.7	1420	8	561	0	33	0	3prime_fragment	FALSE	canonical	3	2115	junction_5	187.524505065338	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	-103522189	False	NA	-9	True	AATAAA	-19	NA	103522269	103519666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022
transcript_30805.known	chr14	-	735	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	1282.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	-103521363	False	NA	-21	True	AATAAA	-7	NA	103521443	103519678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103520043_103520121_103520312_103521262
transcript_30807.known	chr14	+	3217	4	FSM	ENSG00000166166.13	ENST00000389749.9	3217	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	6.53197264742181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	103525632	True	NA	3	True	ATTAAA	-19	NA	103529195	103537073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103529262_103529949_103530310_103532581_103532849_103534549
transcript_30810.nnic	chr14	+	1989	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	0	-1028	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	64.6649484307809	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGAGTGATCCCTAGC	103525632	True	NA	16	True	AATAAA	-16	NA	103529195	103536045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_30811.known	chr14	+	2827	3	FSM	ENSG00000166166.13	ENST00000299202.4	2827	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	69.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	103525662	True	NA	3	True	ATTAAA	-19	NA	103529225	103537073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103529262_103532581_103532849_103534549
transcript_30812.known	chr14	-	4684	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTGTGAGTCTGAGG	-103556518	True	NA	-7	True	AATAAA	-26	NA	103562657	103556550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103561193_103562615
transcript_30815.known	chr14	+	2505	18	FSM	ENSG00000256500.6	ENST00000472726.3	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	125.19916313549	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTCACTTTGGTAACA	103558256	True	NA	42	True	AATACA	-25	NA	103562961	103685924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
transcript_30820.known	chr14	+	2506	5	FSM	ENSG00000256053.9	ENST00000674165.1	2506	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	55.5309598332318	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	103558257	True	NA	NA	False	NA	NA	NA	103562962	103592171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_30822.known	chr14	+	782	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	209.19103443716	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	103558273	True	NA	22	True	AATAAA	-15	NA	103562978	103590527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
transcript_30825.known	chr14	+	575	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	216.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	103558259	True	NA	-1	True	NA	NA	NA	103562964	103590504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103587273_103587365_103590180
transcript_30827.known	chr14	-	2567	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	78.2163823577632	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-103711887	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_30828.nnic	chr14	-	2589	10	NIC	ENSG00000126215.14	novel	2567	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	85.4361359925256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-103711899	True	NA	-33	True	AATAAA	-16	NA	103715463	103697616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712942_103715423
transcript_30830.known	chr14	-	2563	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	72.1481765188837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	NA	False	NA	-33	True	AATAAA	-16	NA	103715504	103697616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_30839.known	chr14	+	1521	8	FSM	ENSG00000100711.14	ENST00000216602.10	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_5	252.243080041002	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCTCGCCTTCCTGTG	103703763	True	NA	24	True	ATTAAA	-21	NA	103715729	103733668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
transcript_30843.known	chr14	+	1383	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	0	0	0	0	multi-exon	TRUE	canonical	3	619	junction_5	133.291243356627	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	103703843	True	NA	20	True	ATTAAA	-17	NA	103715809	103733664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_30854.known	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2224.02139996449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	-103886875	True	NA	-27	True	AATAAA	-17	NA	103921520	103912299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
transcript_30855.known	chr14	-	472	5	FSM	ENSG00000156411.10	ENST00000557040.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2277.46716496638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACCTGGTACTGCTTT	-103886849	True	NA	-13	True	AATAAA	-18	NA	103921494	103912515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103918004_103918125_103921469
transcript_30856.known	chr14	-	842	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	2249.991486095	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTACTTATCTTGT	-103886856	True	NA	-29	True	AATAAA	-15	NA	103921501	103912301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
transcript_30862.known	chr14	-	615	4	FSM	ENSG00000156411.10	ENST00000286953.8	615	4	0	0	0	0	multi-exon	TRUE	canonical	3	4431	junction_1	102.973567266341	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-103886884	True	NA	-15	True	AATAAA	-29	NA	103921529	103912287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103921469
transcript_30865.known	chr14	-	271	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	2196	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTACCTGGTACTGCTT	-103886893	True	NA	-14	True	AATAAA	-17	NA	103921538	103912516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103921469
transcript_30866.known	chr14	-	932	3	FSM	ENSG00000156411.10	ENST00000554089.5	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	4527	junction_2	77	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTAGCTGGGATT	-103886866	True	NA	NA	False	NA	NA	NA	103921511	103913218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103913985_103915065_103915190_103921469
transcript_3087.known	chr1	+	2975	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	27.7733329777209	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGTCTTTAGTTTG	40253183	True	NA	20	True	ATTAAA	-20	NA	40258235	40294180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_30870.known	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1413	junction_3	41.8807831827438	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	104741634	True	NA	19	True	AATAAA	-17	NA	104753146	104759654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
transcript_30875.known	chr14	+	550	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	684	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	104741646	True	NA	24	True	AATAAA	-22	NA	104753158	104759659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_104753320_104756603_104756761_104759427
transcript_30876.known	chr14	-	1595	14	FSM	ENSG00000142208.18	ENST00000554848.5	1595	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	232.988762204552	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGTGGACTGCGCTG	-104790247	False	3944	NA	False	NA	NA	NA	104794191	104770340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104794118
transcript_30878.known	chr14	-	2448	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTAGTAGTTGTAGTGC	-105014761	True	NA	33	True	NA	NA	NA	105021083	105009572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_105011936_105020998
transcript_30880.known	chr14	-	1536	3	FSM	ENSG00000170779.11	ENST00000392590.3	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	297.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGGTGTTAGTTA	-105014738	True	NA	80	True	ATTAAA	-21	NA	105021060	105009935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_105010634_105011159_105011936_105020998
transcript_30881.known	chr14	-	854	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	5.30919014539883	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-105180245	True	NA	-6	True	AATAAA	-17	NA	105181312	105172938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_30882.known	chr14	+	1178	8	FSM	ENSG00000182809.11	ENST00000329146.9	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	4.59369576880387	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTCTCTGCTTGTGGG	105474589	True	NA	4	True	AATAAA	-17	NA	105474820	105480162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_30883.known	chr14	+	1144	9	FSM	ENSG00000185347.18	ENST00000432805.5	1144	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	33.4082231643648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGCAGTGCTGGGAGC	105490085	False	NA	NA	False	NA	NA	NA	105490123	105498696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_105490238_105490980_105491127_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105497356_105497444_105497797_105497978_105498616
transcript_30885.nic	chr14	+	1541	8	NIC	ENSG00000185347.18	novel	1630	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	30.5787708139126	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCCCTCCCCCTGCCA	105490510	True	NA	19	True	AATAAA	-19	NA	105491235	105499228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_105491361_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105497356_105497444_105497797_105497978_105498616
transcript_30887.nic	chr14	+	1442	7	NIC	ENSG00000185347.18	novel	1553	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.4259750111244	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCCCTCCCCCTGCCA	105490510	True	NA	19	True	AATAAA	-19	NA	105491235	105499228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_105491361_105491621_105491701_105492106_105492310_105492578_105492735_105497356_105497444_105497797_105497978_105498616
transcript_30889.known	chr14	+	1311	5	FSM	ENSG00000213145.10	ENST00000330233.11	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.49106001094224	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTACATGCGCGTG	105486297	False	NA	26	True	AGTAAA	-20	NA	105486316	105488791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_105487300_105488165_105488261_105488330_105488389_105488470_105488517_105488662
transcript_30890.known	chr15	+	2799	6	FSM	ENSG00000170113.16	ENST00000559448.5	2799	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	63.6220087705505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAATGTGTTTTTGT	22785622	True	NA	NA	False	ATTAAA	-13	NA	22786766	22826076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22813632_22813715_22820312_22820474_22823727
transcript_30891.known	chr15	+	6553	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	15.4656878282215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	22785499	True	NA	9	True	AATAAA	-21	NA	22786643	22829789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
transcript_30893.known	chr15	+	4223	3	FSM	ENSG00000274253.6	ENST00000619879.6	4229	3	6	0	6	0	multi-exon	FALSE	canonical	3	8	junction_1	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCCATCTGCTCCTC	22757571	True	NA	NA	False	NA	NA	NA	22757840	22768189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22757995_22758818_22758922_22764223
transcript_30894.known	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	320	junction_28	37.0822059753731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-22973099	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_30896.known	chr15	+	2280	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	173.757762416532	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827165	True	NA	8	True	AATAAA	-9	NA	22838686	22867716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_30901.nic	chr15	+	2136	6	ISM	ENSG00000140157.16	ENST00000337451.8	3227	8	6511	668	-5865	0	3prime_fragment	FALSE	canonical	3	271	junction_1	238.052599229666	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22833655	False	NA	8	True	AATAAA	-9	NA	22845176	22867716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_30902.known	chr15	+	1412	5	FSM	ENSG00000140157.16	ENST00000539711.2	1412	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	359.284966983034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGTCCTCAAAT	22827176	True	NA	50	True	NA	NA	NA	22838697	22866916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22838922_22851638_22851871_22858539_22858631_22860628_22860790_22866212
transcript_30903.known	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.2861855802456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	NA	False	NA	0	True	AATAAA	-19	NA	23039569	22999176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_30905.nic	chr15	-	2535	18	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	3	5792	0	-277	5prime_fragment	FALSE	canonical	3	81	junction_9	11.6170141301902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATGTTTTACTTTTT	NA	False	NA	-13	True	AATAAA	-15	NA	23039569	23006075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_30909.nic	chr15	+	1317	5	NIC	ENSG00000259905.7	novel	1251	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGGCAGGCCATGAAG	NA	False	NA	NA	False	AGTAAA	-35	NA	24261065	24280569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24261333_24274790_24274953_24276466_24276659_24278210_24278353_24280015
transcript_3093.known	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_31	5.88795839916535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-40317218	True	NA	33	True	NA	NA	NA	40317286	40300488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_30943.known	chr15	+	1605	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3407.22137828776	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24856156	True	NA	21	True	AATAAA	-23	NA	24856550	24978582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_3097.known	chr1	+	2109	6	FSM	ENSG00000187801.15	ENST00000411995.6	2109	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.45727233402951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	40449461	True	NA	14	True	ATTAAA	-20	NA	40450106	40463718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_3098.nic	chr1	+	2066	5	NIC	ENSG00000187801.15	novel	2109	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	5.1478150704935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCCCAACTCTTAAT	40449415	True	NA	11	True	ATTAAA	-17	NA	40450060	40463715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_40450176_40450655_40451089_40456944_40457072_40457343_40457440_40462420
transcript_31.known	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00078_+_0_1000
transcript_310.nic	chr1	-	2803	19	NIC	ENSG00000188976.11	novel	2757	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	1001	junction_1	262.252211091198	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGGCTCCTGGAGAT	-940540	True	NA	-16	True	AATAAA	-27	NA	959289	944204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_3100.known	chr1	+	1976	5	FSM	ENSG00000187801.15	ENST00000484445.5	1976	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9463256809814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	40449461	True	NA	-24	True	NA	NA	NA	40450106	40463680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40450176_40450664_40451089_40456944_40457072_40457343_40457440_40462420
transcript_3101.known	chr1	+	1899	4	FSM	ENSG00000164002.12	ENST00000415550.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.84573486395988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAACTGATGGTTTTT	40508307	True	NA	5	True	AATAAA	-19	NA	40508766	40516038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508909_40509450_40509626_40509732_40509791_40514514
transcript_3102.known	chr1	+	1892	4	FSM	ENSG00000164002.12	ENST00000358527.6	1892	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3558353285671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508281	True	NA	3	True	AATAAA	-17	NA	40508740	40516036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508878_40509450_40509626_40509732_40509791_40514514
transcript_31022.nnic	chr15	+	1430	10	NNC	ENSG00000128739.23	novel	1468	10	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	3	276	junction_1	2339.91820580903	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	24954831	False	NA	16	True	AATAAA	-18	NA	24954852	24978577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_24955037_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_3103.known	chr1	+	1677	2	FSM	ENSG00000164002.12	ENST00000420209.2	1677	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508294	True	NA	3	True	AATAAA	-17	NA	40508753	40516036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508909_40514514
transcript_3104.known	chr1	+	1625	2	FSM	ENSG00000164002.12	ENST00000418186.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508315	True	NA	3	True	AATAAA	-17	NA	40508774	40516036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508878_40514514
transcript_31064.known	chr15	+	1304	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	2321.71193755549	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTTGTATATATTTT	24828723	True	NA	22	True	AATAAA	-24	NA	24954934	24978583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31065.known	chr15	+	1468	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	0	0	0	0	multi-exon	FALSE	canonical	3	7282	junction_5	263.817464018187	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	24828775	True	NA	8	True	GATAAA	-20	NA	24954986	24978723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31066.known	chr15	+	1298	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2420.75812020598	12237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	24828793	True	NA	-13	True	NA	NA	NA	24955004	24978548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31067.known	chr15	+	1763	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	3480.33846553906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	24828736	True	NA	-22	True	NA	NA	NA	24954947	24978539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31068.known	chr15	+	1751	13	FSM	ENSG00000128739.23	ENST00000400100.5	1751	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3613.6102868953	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24823444	True	NA	21	True	AATAAA	-23	NA	24823646	24978582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24823851_24829797_24829906_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31076.nnic	chr15	+	797	6	NIC	ENSG00000128739.23	novel	1304	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	3109.54277024774	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	24828739	True	NA	16	True	AATAAA	-18	NA	24954950	24978577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24955063_24962113_24962210_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31082.known	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	3647.5855941522	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	24828802	True	NA	22	True	AATAAA	-23	NA	24955013	24968829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
transcript_31085.known	chr15	+	650	3	FSM	ENSG00000273173.5	ENST00000577949.5	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	7503	junction_1	270.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTTTCTGCCAGTAG	24828774	True	NA	NA	False	NA	NA	NA	24954985	24968408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931
transcript_3109.known	chr1	+	2102	6	FSM	ENSG00000117010.17	ENST00000648542.1	2102	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	22.5335305711289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAGTTGAGGAAAAGAA	40530701	True	NA	-51	True	NA	NA	NA	40531572	40548110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40532732_40532809_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_31090.known	chr15	-	5075	14	FSM	ENSG00000114062.22	ENST00000630424.2	5075	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	163.655179421488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25438674	False	3275	-23	True	AATAAA	-13	NA	25438694	25337246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407263_25409087_25409208_25411907_25411972_25438488
transcript_31091.known	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_10	123.619347415991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-25435749	True	NA	0	True	CATAAA	-21	NA	25439024	25333727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_31092.known	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	88.5146315588558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25435749	True	NA	-23	True	AATAAA	-13	NA	25439024	25337246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_31094.known	chr15	-	1759	8	FSM	ENSG00000206190.13	ENST00000673716.1	1759	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.07106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATGAATGGTCTCCAT	-25863221	True	NA	-5	True	ATTAAA	-20	NA	25863343	25719149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25719299_25721656_25721910_25723890_25724022_25725950_25726083_25727159_25727267_25736055_25736142_25781018_25781224_25862647
transcript_31095.known	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_8	277.973441851915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	-26770836	True	NA	-19	True	AATAAA	-13	NA	26773788	26544784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
transcript_31097.known	chr15	-	5767	9	FSM	ENSG00000166206.15	ENST00000311550.10	5767	9	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	75.8649087193809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAATGTGAAGACTGATT	-26773020	False	2952	-10	True	ATTAAA	-15	NA	26773066	26543551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26772882
transcript_3110.known	chr1	+	1028	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	16.1148223694833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGCCAGGCTGATT	40530791	True	NA	NA	False	NA	NA	NA	40531662	40545037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_31100.known	chr15	-	406	4	FSM	ENSG00000166206.15	ENST00000554722.1	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	467.786988560677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGCTGCTTCAGAGAGC	-26770799	True	NA	NA	False	NA	NA	NA	26773751	26771818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_26771958_26772401_26772470_26772680_26772773_26773644
transcript_31102.known	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	48.2684161745546	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	26864983	True	NA	18	True	AATAAA	-21	NA	26867061	26949208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_31103.nnic	chr15	+	2378	11	NNC	ENSG00000186297.12	novel	2553	11	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	74.4008736507845	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTTGTGGACATATAG	26864983	True	NA	5	True	AATAAA	-8	NA	26867061	26949195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943456_26943507_26947933
transcript_31106.known	chr15	+	2761	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	43.1768456467121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865047	True	NA	17	True	AATAAA	-20	NA	26867125	26949207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_31109.known	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	58.5139004272478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	26866898	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_3111.known	chr1	+	2019	5	FSM	ENSG00000117010.17	ENST00000372699.8	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	7.46240577829965	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	40530765	True	NA	6	True	AATAAA	-17	NA	40531636	40548167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_31114.nic	chr15	-	897	5	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	29	168780	-1	214	5prime_fragment	FALSE	canonical	3	54	junction_1	38.758869952567	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAGAGACAATGTCTT	NA	False	NA	-26	True	AATAAA	-17	NA	28322150	28279819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_31115.known	chr15	-	15364	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_88	51.7251294081256	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGCTGAGCTTTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	28322179	28111039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_31116.known	chr15	-	491	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	40	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGGATGATGGGAT	NA	False	NA	NA	False	NA	NA	NA	28322119	28320121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_28320465_28321361_28321465_28322074
transcript_31117.known	chr15	+	409	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	795	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTATCT	NA	False	NA	6	True	AATAAA	-19	NA	28315650	28316059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_28315600_28316100
transcript_31118.known	chr15	+	3351	5	FSM	ENSG00000261377.6	ENST00000566178.5	3351	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	21.7987958383026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTTGGTTTTGGG	28831720	True	NA	NA	False	AATATA	-41	NA	28832320	28859007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_28832461_28833275_28833379_28838687_28838823_28846738_28846837_28856132
transcript_31120.known	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	47	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	28831779	True	NA	39	True	AATATA	-26	NA	28832379	28838983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_28832461_28833275_28833379_28838687
transcript_31121.known	chr15	+	1451	1	FSM	ENSG00000259523.1	ENST00000557989.1	1451	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29822630	29824081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_29822600_29824100
transcript_31127.nic	chr15	+	1499	6	NIC	ENSG00000285077.3	novel	589	5	NA	NA	95	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_5	62.1784528594914	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	30626060	30635387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635308
transcript_31128.nic	chr15	+	1596	5	ISM	ENSG00000285077.3	ENST00000689358.1	2164	8	315	4405	116	0	5prime_fragment	FALSE	canonical	3	71	junction_4	46.2763438486664	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	30626081	30635385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079
transcript_3113.nnic	chr1	+	1908	4	NIC	ENSG00000117010.17	novel	2019	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	17.2111075245674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	40530749	True	NA	6	True	AATAAA	-17	NA	40531620	40548167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_40531788_40533142_40533182_40541614_40541711_40546561
transcript_31130.known	chr15	+	4849	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	27.8047125648931	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCATGAATGCCTT	30900003	True	NA	NA	False	AATAAA	-25	NA	30903914	30943108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_31131.known	chr15	+	4714	15	FSM	ENSG00000198690.10	ENST00000670849.1	4714	15	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	43.1552134623337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGCTCTTTCCAATGT	30899974	True	NA	NA	False	TTTAAA	-28	NA	30903885	30942931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_31132.known	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	97.8059302905504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	30899952	True	NA	NA	False	NA	NA	NA	30903863	30911212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
transcript_31133.known	chr15	+	2304	4	FSM	ENSG00000198690.10	ENST00000565466.5	2304	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	29.8477618740315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCAGTTGAAAATTAC	30899981	True	NA	NA	False	NA	NA	NA	30903892	30911271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613
transcript_31134.known	chr15	+	2687	4	FSM	ENSG00000198690.10	ENST00000561607.6	2687	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	73.6040457825217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTATAGAATCCTCATCT	30899980	True	NA	16	True	AATAAA	-28	NA	30903891	30911640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613
transcript_31135.nnic	chr15	-	551	3	NNC	ENSG00000166912.17	novel	4985	16	NA	NA	-13	-25738	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	27	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTTTTATTCTGAGA	-30991426	True	NA	NA	False	AATAAA	-23	NA	30991641	30986618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_30986914_30990776_30990838_30991446
transcript_31136.known	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	9.88736567544662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-30991616	False	NA	-21	True	AATAAA	-18	NA	30991628	30938940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
transcript_31137.nnic	chr15	-	1008	3	NNC	ENSG00000134160.15	novel	986	3	NA	NA	-12510	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCAATATACAGTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	31080602	31069389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_31070227_31076904_31076985_31080511
transcript_31138.known	chr15	+	6149	10	FSM	ENSG00000175344.19	ENST00000306901.9	6149	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	3.93778781037097	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCGTAGTTTTGTAATAT	32029839	True	NA	NA	False	AATAAA	-27	NA	32030514	32173018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_31140.known	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_11	24.829667671844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	32614982	True	NA	10	True	AATAAA	-14	NA	32615503	32639941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_31143.nic	chr15	+	2309	12	NIC	ENSG00000198826.11	novel	2422	11	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	87.8173348349895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	NA	False	NA	6	True	ATTAAA	-15	NA	32615454	32636181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_32615608_32615804_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_31144.nic	chr15	+	2715	11	NIC	ENSG00000198826.11	novel	2422	11	NA	NA	7	0	intron_retention	TRUE	canonical	3	35	junction_8	88.8729992742453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	NA	False	NA	6	True	ATTAAA	-15	NA	32615158	32636181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629676_32632978_32633109_32633932_32634042_32635776
transcript_31145.known	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	20.9057408383439	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	32615017	True	NA	6	True	ATTAAA	-15	NA	32615538	32636181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_3115.known	chr1	+	562	4	FSM	ENSG00000117010.17	ENST00000465152.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	21.7613316585993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAATAGAAGTTATACT	40530781	True	NA	NA	False	TATAAA	-41	NA	40531652	40546765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40540585_40540713_40541614_40541711_40546561
transcript_31150.nic	chr15	+	1618	5	ISM	ENSG00000198826.11	ENST00000563864.5	2279	11	-98	10747	-37	9151	5prime_fragment	FALSE	canonical	3	325	junction_3	4.52769256906871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTATATTAGTATCT	32614945	True	NA	NA	False	AAAAAG	-6	NA	32615466	32625401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079
transcript_31151.known	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	65	junction_3	31.891064579283	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
transcript_31153.known	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	22.6061938415117	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
transcript_31157.known	chr15	+	949	5	FSM	ENSG00000166922.9	ENST00000497208.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	56.38705525207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGATTTCTTGCA	32639489	True	NA	10	True	AATAAA	-14	NA	32641701	32696889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32696513
transcript_3116.known	chr1	+	1329	3	FSM	ENSG00000117010.17	ENST00000493756.1	1329	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTATACATTATATTAA	40530850	False	NA	NA	False	AATAAA	-30	NA	40531721	40547785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40533142_40533182_40546561
transcript_31160.nic	chr15	+	1194	5	ISM	ENSG00000166922.9	ENST00000413748.6	1235	6	1	4790	1	0	5prime_fragment	FALSE	canonical	3	90	junction_3	24.3053492054733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGTCTGTTGAATT	32639464	True	NA	9	True	NA	NA	NA	32641676	32692308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709
transcript_31161.known	chr15	+	1148	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	55.1968069728675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	32639486	True	NA	21	True	AATAAA	-11	NA	32641698	32697088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
transcript_31164.nnic	chr15	+	628	3	NNC	ENSG00000166922.9	novel	949	5	NA	NA	0	-24643	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATTTCTTTTTACTTTT	32639489	True	NA	NA	False	ATTAAA	-14	NA	32641701	32667120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_32641779_32643585_32643819_32666802
transcript_31165.known	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	29.7405447159261	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	-34093620	True	NA	3	True	ATTAAA	-23	NA	34101862	34084016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
transcript_31166.known	chr15	-	506	5	FSM	ENSG00000134153.10	ENST00000528949.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	314.762906804471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAAGTGGGGCTGGCAA	-34093565	False	NA	NA	False	AGTAAA	-4	NA	34101807	34084363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101764
transcript_31167.known	chr15	-	581	4	FSM	ENSG00000134153.10	ENST00000527822.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	346.218941647559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCAGAGCTGGCATTT	-34093565	False	NA	NA	False	AGTAAA	-38	NA	34101807	34084329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34101603
transcript_31174.nic	chr15	-	1782	11	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	0	151	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	133.519137205121	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207115	True	NA	-2	True	ATTAAA	-20	NA	34210096	34141810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_31177.nic	chr15	-	1696	11	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	0	65	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	133.519137205121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCAGCTATTTTCTTA	-34207115	True	NA	-4	True	ATTAAA	-18	NA	34210096	34141896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_31179.known	chr15	-	2740	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	33.5592345297419	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAGTTATCACTGTC	-34207115	True	NA	-1	True	GATAAA	-23	NA	34210096	34140673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_31186.nnic	chr15	-	1519	10	NNC	ENSG00000134152.11	novel	2740	10	NA	NA	-12	151	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	104.526209129872	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207127	True	NA	-2	True	ATTAAA	-20	NA	34210108	34141810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34152974_34154643_34154685_34163559_34163691_34209950
transcript_31189.nic	chr15	-	1343	10	NIC	ENSG00000134152.11	novel	733	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	108.130693670115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTGGTCTTTATTG	-34207127	True	NA	2	True	TTTAAA	-11	NA	34210108	34144963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34145253_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_3119.known	chr1	+	1536	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	99.1314279126453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	40689400	True	NA	37	True	ATTAAA	-38	NA	40691715	40771139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
transcript_31199.nnic	chr15	-	1564	9	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	-12	151	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	119.796115859405	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207127	True	NA	-2	True	ATTAAA	-20	NA	34210108	34141810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_31218.nic	chr15	-	1384	7	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	-12	151	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	138.800416265786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207127	True	NA	-2	True	ATTAAA	-20	NA	34210108	34141810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_3122.known	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	80.8580527304363	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	40689427	True	NA	16	True	AATAAA	-14	NA	40691742	40771601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
transcript_31225.known	chr15	+	1006	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	548.5	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	34208368	True	NA	22	True	AATAAA	-31	NA	34225036	34230156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
transcript_31227.known	chr15	+	852	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	570.579237851034	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	34208344	True	NA	13	True	AATAAA	-22	NA	34225012	34230147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
transcript_31231.known	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	6080	junction_1	0	3207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	-34321083	True	NA	-25	True	ATTAAA	-20	NA	34343136	34341718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34342109_34343019
transcript_31232.known	chr15	-	436	2	FSM	ENSG00000182117.6	ENST00000557912.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	-34321070	True	NA	-25	True	ATTAAA	-20	NA	34343123	34341718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34342051_34343019
transcript_31237.nnic	chr15	-	1960	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	66.5748006503411	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34365472	True	NA	NA	False	ATTAAA	-15	NA	34367206	34358908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_3124.known	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	92.6216250780495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	40708136	True	NA	18	True	AATAAA	-16	NA	40709356	40771603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_31242.known	chr15	-	2165	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	28.9173480414695	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTACCATTCCATATT	-34365462	True	NA	NA	False	ATTAAA	-13	NA	34367196	34358632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_31243.nnic	chr15	-	1912	14	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	59.1847973443045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34365472	True	NA	NA	False	ATTAAA	-15	NA	34367206	34358908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363733_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_3125.known	chr1	+	1202	10	FSM	ENSG00000066136.21	ENST00000372651.5	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	72.9139523304316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGGACACTGGTGCAC	40708322	False	NA	NA	False	NA	NA	NA	40709542	40770940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_31254.known	chr15	-	1382	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	18.9443629845104	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCCTCTCGTTTGTTT	-34794766	True	NA	NA	False	AATAAA	-23	NA	34795549	34790229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
transcript_31256.known	chr15	-	9597	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_24	42.1609722119245	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-34961651	True	NA	0	True	AGTAAA	-21	NA	34969742	34851781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
transcript_31260.known	chr15	-	5439	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_1	26	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-34977698	True	NA	-3	True	AATAAA	-16	NA	34988287	34978340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34983491_34987556_34987674_34988115
transcript_31264.nnic	chr15	-	1685	2	NNC	ENSG00000198146.4	novel	5439	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	0	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-34977703	True	NA	-3	True	AATAAA	-16	NA	34988292	34978340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34979849_34988115
transcript_31270.known	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_1	29.6497786669648	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	-35544084	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_31277.known	chr15	-	3648	4	FSM	ENSG00000134146.12	ENST00000440392.3	3648	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	92.6318879580173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTCTTCATGT	-35544111	True	NA	NA	False	AATAAA	-15	NA	35546192	35518993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_35522279_35538273_35538468_35542412_35542508_35546118
transcript_31278.known	chr15	-	465	6	FSM	ENSG00000134146.12	ENST00000558266.5	465	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.7646152362012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGCATAGTATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	35454760	35372106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_35372194_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746
transcript_3128.known	chr1	+	2840	19	FSM	ENSG00000171793.16	ENST00000650070.2	2840	19	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.1136306503947	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	40972569	True	NA	NA	False	AATAAA	-22	NA	40979695	41012565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_31281.known	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6940188070628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578585	False	NA	NA	False	AATAAA	-16	NA	36579843	36810244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
transcript_31283.known	chr15	+	2872	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	12.0847010720166	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578367	True	NA	NA	False	AATAAA	-16	NA	36579625	36810244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_31285.known	chr15	+	2506	10	FSM	ENSG00000186073.14	ENST00000642817.1	2506	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.1626557133873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTCTGTTTCAGTAT	36578393	True	NA	NA	False	ATTAAA	-44	NA	36579651	36809950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_36579962_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_31287.known	chr15	+	7270	7	FSM	ENSG00000166068.13	ENST00000299084.9	7270	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_6	6.50640709864771	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAATAGTGTTTCTTTT	38252777	False	NA	10	True	AATAAA	-19	NA	38252835	38357249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013
transcript_31288.nnic	chr15	-	336	2	Antisense	novelGene_ENSG00000166068.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGCGCTAAACCAGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	38253675	38250724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr15_-_38250952_38253566
transcript_31290.known	chr15	-	789	2	FSM	ENSG00000259345.7	ENST00000558277.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCAGCAATCCCGTTAC	-39420564	False	NA	NA	False	AATGAA	-17	NA	39420709	39419029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_39419653_39420543
transcript_31293.known	chr15	-	2816	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	2.60958183534679	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTTGCTGGCACAT	-39782677	True	NA	NA	False	AATAAA	-22	NA	39782841	39600030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
transcript_31296.known	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	35	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-39914110	True	NA	NA	False	AATAAA	-28	NA	39920266	39799007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_39802255_39807005_39807259_39919854
transcript_31299.nic	chr15	+	596	5	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	15	21478	15	7056	5prime_fragment	TRUE	canonical	3	388	junction_4	54.172756067972	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAAAAGGAAAGA	39928593	True	NA	43	True	GATAAA	-2	NA	39934160	39953951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903
transcript_3130.nic	chr1	+	1967	18	ISM	ENSG00000171793.16	ENST00000650070.2	2840	19	-31	2307	-23	669	5prime_fragment	FALSE	canonical	3	348	junction_11	25.8408758569036	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTACTTTAAAGTTTTAG	40972538	True	NA	14	True	AATAAA	-24	NA	40979664	41010258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160
transcript_31302.known	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	7515	junction_4	758.788961108423	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-39967721	True	NA	42	True	NA	NA	NA	40039181	40035689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
transcript_31303.known	chr15	-	468	4	FSM	ENSG00000140319.11	ENST00000560773.5	468	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4172.88903385758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTTTTCACATAAGAT	-39967696	True	NA	NA	False	NA	NA	NA	40039156	40036242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40039092
transcript_31305.known	chr15	-	791	6	FSM	ENSG00000140319.11	ENST00000558527.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3878.28268180647	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTTTATTCCTT	-39967704	True	NA	-24	True	ATTAAA	-16	NA	40039164	40036040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40036501_40036985_40037019_40037308_40037349_40038281_40038395_40038875_40038949_40039092
transcript_31308.known	chr15	+	669	4	FSM	ENSG00000248508.9	ENST00000560341.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7973274814304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCCTCCTAATTTT	40038846	True	NA	NA	False	TATAAA	-23	NA	40039348	40057000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40056452_40056642_40056729
transcript_31309.known	chr15	+	1058	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	10.6249183003395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038788	True	NA	NA	False	ATTAAA	-19	NA	40039290	40065705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
transcript_3131.known	chr1	+	2648	18	FSM	ENSG00000171793.16	ENST00000648914.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	97.6320328623268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATAGCTACGTGGCAC	40972578	True	NA	NA	False	NA	NA	NA	40979704	41012479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_31310.known	chr15	+	879	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	60	3	0	0	multi-exon	FALSE	canonical	1	6	junction_2	11.4697670227235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038802	True	NA	NA	False	ATTAAA	-19	NA	40039304	40065705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
transcript_31311.known	chr15	+	568	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	45	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	11.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	40038802	True	NA	NA	False	TATAAA	-26	NA	40039304	40057003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40056688
transcript_31312.known	chr15	+	2538	3	FSM	ENSG00000248508.9	ENST00000504245.7	2560	3	22	0	5	0	multi-exon	FALSE	canonical	3	8	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATGTTTAATAGTT	40038793	True	NA	-6	True	AATAAA	-6	NA	40039295	40067496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40065220
transcript_31316.nnic	chr15	+	3746	23	NNC	ENSG00000156970.13	novel	3669	23	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_12	189.212460931887	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40139710	True	NA	15	True	AATAAA	-16	NA	40161006	40221123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202389_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_31317.known	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_5	71.8729509230014	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40139772	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_31319.nnic	chr15	+	3686	23	NNC	ENSG00000156970.13	novel	3669	23	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	192.879362159634	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40139710	True	NA	15	True	AATAAA	-16	NA	40161006	40221123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202449_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_31339.known	chr15	+	903	10	FSM	ENSG00000128944.14	ENST00000560220.5	903	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	199.617288150087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGCATAAAATCTCAGAG	40376041	True	NA	NA	False	NA	NA	NA	40382975	40393626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40384456_40384520_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_3134.known	chr1	+	1607	13	FSM	ENSG00000171793.16	ENST00000463285.6	1607	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	116.323065449444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGCAGTTTGACTTT	40972631	True	NA	10	True	AATAAA	-15	NA	40979757	41004250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41003980
transcript_31347.known	chr15	+	1388	9	FSM	ENSG00000128944.14	ENST00000561169.5	1388	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	162.536870817055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACAATACACCTTG	40376044	True	NA	25	True	AATAAA	-32	NA	40382978	40394160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31349.known	chr15	+	1899	9	FSM	ENSG00000128944.14	ENST00000416151.6	1899	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	160.069467341526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACATGAAACAATAC	NA	False	NA	19	True	AATAAA	-26	NA	40382720	40394154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393192
transcript_31350.known	chr15	+	1495	9	FSM	ENSG00000128944.14	ENST00000608100.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	29.567718883945	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTGTAACATTGAGGA	40376006	True	NA	-10	True	AATAAA	-16	NA	40382940	40394246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31355.known	chr15	+	1598	9	FSM	ENSG00000128944.14	ENST00000560981.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	155.097096604031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	NA	False	NA	37	True	AATAAA	-44	NA	40382720	40394172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386404_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31357.known	chr15	+	1464	8	FSM	ENSG00000128944.14	ENST00000448395.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	163.143607704053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	NA	False	NA	37	True	AATAAA	-44	NA	40382835	40394172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391948_40392024_40393468
transcript_3136.known	chr1	-	3323	16	FSM	ENSG00000010803.16	ENST00000372596.5	3323	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	20.4439613469493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241558	True	NA	-28	True	AATAAA	-15	NA	41242116	41027201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_31364.known	chr15	+	665	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	228.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	40376006	True	NA	2	True	AATACA	-15	NA	40382940	40384922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40384456
transcript_31366.nnic	chr15	+	1775	12	NNC	ENSG00000128928.10	novel	4665	12	NA	NA	-45	-657	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	145.527424923822	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTAAATGGAAATTTCTA	40397914	True	NA	NA	False	NA	NA	NA	40405749	40417518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40416959
transcript_31368.known	chr15	+	4350	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	40397959	True	NA	NA	False	AATAAA	-36	NA	40405794	40421308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_3137.known	chr1	-	3108	15	FSM	ENSG00000010803.16	ENST00000337495.9	3108	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	21.8754591788542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241552	True	NA	-28	True	AATAAA	-15	NA	41242110	41027201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_31370.nic	chr15	+	2031	12	NIC	ENSG00000128928.10	novel	4665	12	NA	NA	-45	-300	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	146.620610098939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCTTGTA	40397914	True	NA	5	True	AATAAA	-16	NA	40405749	40418857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_40405972_40407635_40407813_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_31378.known	chr15	+	4665	12	FSM	ENSG00000128928.10	ENST00000651168.1	4665	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGAGTGGTAAATGGA	NA	False	NA	NA	False	AATAAA	-41	NA	40405484	40421313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_3138.known	chr1	-	363	2	FSM	ENSG00000010803.16	ENST00000488592.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAATTTTCCAGATTG	-41241596	True	NA	NA	False	NA	NA	NA	41242154	41185983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_41186251_41242058
transcript_31380.known	chr15	+	2175	1	FSM	ENSG00000169105.8	ENST00000306243.7	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCATTTCTGTGATTT	40470508	True	NA	17	True	AATAAA	-17	NA	40470983	40473158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40471000_40473200
transcript_31383.nic	chr15	-	1733	4	NIC	ENSG00000128891.16	novel	1577	4	NA	NA	0	266	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	26.2466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTTGCATGTCATCTGT	-40563777	False	NA	-35	True	AGTAAA	-18	NA	40565057	40531064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40532303_40557215_40557373_40562771_40563028_40564975
transcript_31384.nic	chr15	-	1457	4	NIC	ENSG00000128891.16	novel	1577	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	26.2466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAATAAAAAAAAA	-40563777	False	NA	NA	False	NA	NA	NA	40565057	40531340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40532303_40557215_40557373_40562771_40563028_40564975
transcript_31385.known	chr15	-	1509	4	FSM	ENSG00000128891.16	ENST00000416810.7	1509	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	4.18993502999218	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTGTGGTGCTG	-40563762	True	NA	-4	True	TATAAA	-17	NA	40565042	40553098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564975
transcript_31386.known	chr15	-	1075	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATCTGCCTGCCTCGGC	-40563762	True	NA	NA	False	NA	NA	NA	40565042	40556620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40557373_40562771_40563028_40564975
transcript_31388.known	chr15	+	2365	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	6	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGTCTCTGTTTCCCTT	40565776	True	NA	13	True	TATAAA	-21	NA	40569298	40574949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40569944_40571603_40571901_40573526
transcript_31389.known	chr15	+	1558	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	94	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	40565809	True	NA	-75	True	NA	NA	NA	40569331	40574358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40569761_40571603_40571901_40573526
transcript_31391.known	chr15	+	5923	10	FSM	ENSG00000137812.21	ENST00000533001.1	5923	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.2716406192758	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTTATTTTGCCAA	40591610	True	NA	NA	False	NA	NA	NA	40594264	40626042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639
transcript_31398.known	chr15	+	2439	10	FSM	ENSG00000051180.17	ENST00000645673.2	2439	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	133.646668865204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	40691125	True	NA	3	True	AATAAA	-15	NA	40695173	40732340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40701805_40701927_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31399.known	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	33.6301598913979	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	40691125	True	NA	3	True	AATAAA	-15	NA	40695173	40732340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_3140.known	chr1	+	10577	5	FSM	ENSG00000177181.15	ENST00000431473.4	10577	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_4	21.7313138121007	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTTTGCAATTTACT	42378319	True	NA	NA	False	ATTAAA	-19	NA	42380791	42424232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410188_42414483
transcript_31404.known	chr15	+	1611	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	94.4202705990615	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTGCACAGATTC	40695098	False	NA	17	True	AATAAA	-24	NA	40695128	40731592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
transcript_31406.known	chr15	+	1545	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	100.622360213821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	40691138	True	NA	-18	True	ACTAAA	-39	NA	40695186	40731557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31407.nic	chr15	+	1588	9	NIC	ENSG00000051180.17	novel	2436	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	105.767359686247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTGCACAGATTCTT	40691109	True	NA	19	True	AATAAA	-26	NA	40695157	40731594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_40695426_40698756_40698846_40701063_40701202_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31414.known	chr15	-	1242	4	FSM	ENSG00000245849.8	ENST00000650326.1	1242	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGTTTTATGGCTCA	-40694079	True	NA	-86	True	AATAAA	-4	NA	40695093	40686242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40687147_40687798_40687845_40694585_40694796_40695011
transcript_31416.known	chr15	-	1962	3	FSM	ENSG00000245849.8	ENST00000526635.2	1962	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACCCAGCTTTAAAATT	-40694087	True	NA	-26	True	NA	NA	NA	40695101	40686182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40687845_40694585_40694796_40695011
transcript_31418.known	chr15	-	1151	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGCTGGGCGTGGTG	-40694093	True	NA	NA	False	NA	NA	NA	40695107	40693740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40694796_40695011
transcript_31421.known	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	20.4944098069043	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752487	True	NA	-17	True	AATAAA	-16	NA	40755254	40735886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_31422.nnic	chr15	-	2203	13	NNC	ENSG00000137824.16	novel	2246	13	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_12	47.8327526097153	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752474	True	NA	-17	True	AATAAA	-16	NA	40755241	40735886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755112
transcript_31423.nic	chr15	-	2130	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	27	junction_12	40.8400504679196	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752487	True	NA	-17	True	AATAAA	-16	NA	40755254	40735886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
transcript_31426.nnic	chr15	-	1805	10	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	1	junction_6	54.8299278465175	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752493	True	NA	-17	True	AATAAA	-16	NA	40755260	40735886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_31429.nic	chr15	-	1917	4	ISM	ENSG00000137824.16	ENST00000338376.8	2246	13	-6	14331	-6	-6124	5prime_fragment	FALSE	canonical	3	115	junction_3	21.0607586652418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACGAGCTGGGCATG	-40752493	True	NA	NA	False	AAGAAA	-14	NA	40755260	40750217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_40751570_40751985_40752179_40754596_40754791_40755082
transcript_3143.known	chr1	+	966	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	42456085	False	NA	NA	False	NA	NA	NA	42456116	42460081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42456500_42457246_42457351_42459602
transcript_31433.known	chr15	+	2775	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.3922687537472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	40806810	True	NA	NA	False	TATAAA	-22	NA	40807088	40815084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_31441.known	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	12.1692234756372	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-40802711	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_31446.known	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.8442328730529	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	40807311	False	NA	27	True	AATAAA	-19	NA	40807589	40814569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_3145.known	chr1	+	984	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	250.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTTTTGTTTGAAA	42450923	True	NA	23	True	AATAAA	-33	NA	42456560	42460414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42456629_42457246_42457351_42459602
transcript_31457.known	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	17.5	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40757578	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40764217_40765826_40765922_40767225
transcript_31458.known	chr15	-	529	5	FSM	ENSG00000104129.10	ENST00000561110.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	11.5217186218029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTACCTCTATCCCA	-40775606	False	NA	-7	True	AATAAA	-15	NA	40775621	40767872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552
transcript_31461.known	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	67	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	-40842347	True	NA	0	True	AATAAA	-24	NA	40844387	40835992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40836283_40838542_40838687_40844178
transcript_31462.nnic	chr15	-	1031	3	NNC	ENSG00000261183.6	novel	643	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	76	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTAACTTTTGGAATGC	-40842369	True	NA	-8	True	AATAAA	-16	NA	40844409	40836000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_40836283_40838168_40838687_40844178
transcript_31465.known	chr15	-	629	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAAAAATGTTCAGC	-40842292	True	NA	NA	False	TATAAA	-38	NA	40844332	40835807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40836283_40844178
transcript_31466.known	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	164	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	-40842260	True	NA	61	True	AATAAA	-19	NA	40844300	40838338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40838687_40844178
transcript_31468.known	chr15	+	3875	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	11.5839328382031	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	40891802	True	NA	15	True	ATTAAA	-15	NA	40894449	40903975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
transcript_31469.known	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	2.5	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	40951379	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40953815_40954227_40954264_40955372
transcript_3147.known	chr1	+	2269	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	53	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGACTGAAATACTTC	42450905	True	NA	16	True	AATAAA	-26	NA	42456542	42461236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42457074_42457246_42457351_42459602
transcript_31472.known	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	8.05536398239638	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	41225541	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_3148.known	chr1	+	641	3	FSM	ENSG00000127125.9	ENST00000471420.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	269.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTATCACTGTATA	42456765	False	NA	6	True	ATTAAA	-20	NA	42456800	42473385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42457074_42457246_42457351_42473121
transcript_31483.known	chr15	+	2232	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	570.235600431962	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318901	True	NA	21	True	AATAAA	-22	NA	41332912	41381050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_31487.known	chr15	+	2256	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	561.82278344688	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318874	True	NA	21	True	AATAAA	-22	NA	41332885	41381050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_3149.nic	chr1	+	1692	3	NIC	ENSG00000127125.9	novel	2269	3	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	60	junction_2	244.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTGTTTGAAAT	42450878	True	NA	24	True	AATAAA	-34	NA	42456515	42460415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_42457074_42457246_42457568_42459602
transcript_31494.known	chr15	+	2409	11	FSM	ENSG00000137804.14	ENST00000260359.10	2409	11	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_3	447.5461987326	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	NA	False	NA	21	True	AATAAA	-22	NA	41332693	41381050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_3153.known	chr1	+	1617	2	FSM	ENSG00000127125.9	ENST00000472013.1	1617	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTGTTTTGTTTGA	42450906	True	NA	21	True	AATAAA	-31	NA	42456543	42460412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42457351_42459602
transcript_31530.known	chr15	+	1301	9	FSM	ENSG00000137804.14	ENST00000450592.6	1301	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	723.992910445261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACTTTAGTCACGAGAT	41318859	True	NA	NA	False	NA	NA	NA	41332870	41380263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41333051_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41377195_41377305_41380092
transcript_31557.nnic	chr15	+	1509	5	NNC	ENSG00000247556.6	novel	473	5	NA	NA	-28	847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	303.604491896941	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGTATTGGAACATC	41259259	True	NA	18	True	AATAAA	-27	NA	41283961	41299628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41298782_41299238
transcript_31559.known	chr15	+	1384	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	355.502812928393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	41259329	True	NA	NA	False	AATAAA	-18	NA	41284031	41309737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
transcript_31564.known	chr15	+	546	5	FSM	ENSG00000137804.14	ENST00000558582.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	821.15052670019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGTTGCAATGGTAC	41318871	True	NA	NA	False	NA	NA	NA	41332882	41351986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41351963
transcript_31567.known	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	30.1081384346492	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-41328195	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
transcript_31571.known	chr15	+	642	4	FSM	ENSG00000247556.6	ENST00000559368.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	345.071973168884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAATAGGCTTCATACC	41259305	True	NA	NA	False	NA	NA	NA	41284007	41288271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287961
transcript_31572.known	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	336.11539023906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	41259328	True	NA	16	True	AATAAA	-18	NA	41284030	41289155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
transcript_31573.known	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_3	59.4194132137525	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259302	True	NA	15	True	AATAAA	-28	NA	41284004	41306534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
transcript_31577.known	chr15	-	485	4	FSM	ENSG00000104147.9	ENST00000560640.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	215.264178781948	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATCCTGTACCAAA	-41332477	False	NA	NA	False	AATGAA	-39	NA	41332487	41309761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41309850_41313272_41313355_41331914_41331982_41332239
transcript_31579.nnic	chr15	-	1119	4	NIC	ENSG00000104147.9	novel	1201	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	202.224847357808	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-41328195	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_41309850_41319657_41319781_41331914_41331982_41332239
transcript_31580.known	chr15	+	676	3	FSM	ENSG00000247556.6	ENST00000558457.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGGTGGGCAGATAC	41259287	True	NA	NA	False	NA	NA	NA	41283989	41286426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010
transcript_31584.known	chr15	+	821	4	FSM	ENSG00000247556.6	ENST00000561275.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	338.943784260589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGTGTGGT	41259303	True	NA	NA	False	ACTAAA	-6	NA	41284005	41297290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41296803
transcript_31585.known	chr15	+	5021	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	9	0	9	0	multi-exon	FALSE	canonical	1	192	junction_16	95.4835807186304	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGAGTCTAAGGATT	41412662	True	NA	NA	False	AATAAA	-25	NA	41417103	41483563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
transcript_31588.known	chr15	-	1585	6	FSM	ENSG00000137806.10	ENST00000559127.5	1585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.3704753636736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGCCTATGAAAATTCT	-41401314	True	NA	-81	True	NA	NA	NA	41402459	41387493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41387594_41388447_41388523_41394104_41394359_41394858_41395045_41396486_41397141_41402143
transcript_31592.nnic	chr15	-	1498	5	NNC	ENSG00000137806.10	novel	1509	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	60.9282364753814	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-41401353	True	NA	-2	True	AATAAA	-23	NA	41402498	41387352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_41387581_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_31594.nnic	chr15	-	1226	5	NNC	ENSG00000137806.10	novel	1364	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	60.9282364753814	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	NA	False	NA	-2	True	AATAAA	-23	NA	41402529	41387352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_41387581_41388447_41388523_41394858_41395045_41396486_41397141_41402446
transcript_31595.known	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-41401351	True	NA	-2	True	AATAAA	-23	NA	41402496	41387352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_31597.known	chr15	-	1364	5	FSM	ENSG00000137806.10	ENST00000560978.2	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTCTCCTGCCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	41402519	41387217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402446
transcript_3160.known	chr1	+	937	11	FSM	ENSG00000171960.12	ENST00000678038.1	937	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_9	178.06754336487	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCGTATGTTTTTTTT	NA	False	NA	8	True	AATAAA	-8	NA	42658334	42676748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42668046_42668152_42676583
transcript_31601.known	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	66.1261420821347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-41401315	True	NA	NA	False	NA	NA	NA	41402460	41394046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
transcript_31610.known	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_24	34.9132854369221	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	-41536888	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_31618.known	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	26.6664965980971	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	41825860	True	NA	15	True	AATAAA	-13	NA	41828091	41837581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_31622.known	chr15	+	1192	7	FSM	ENSG00000243789.11	ENST00000408047.5	1192	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	55.876848714134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCCTGTCAGTAAAG	41825870	True	NA	NA	False	NA	NA	NA	41828101	41837452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41828189_41834893_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_31627.known	chr15	-	2964	20	FSM	ENSG00000103978.16	ENST00000389834.9	2964	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	61.9418009392777	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	-42269549	True	NA	NA	False	NA	NA	NA	42273433	42210446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_31628.nic	chr15	-	2899	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-14	-80	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	80.5261093908604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	-42269566	True	NA	NA	False	TATAAA	-15	NA	42273450	42210531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_3163.known	chr1	+	923	11	FSM	ENSG00000171960.12	ENST00000372550.6	923	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	177.27461747244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	NA	False	NA	17	True	AATAAA	-17	NA	42658334	42676757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675366_42675449_42676583
transcript_31631.nic	chr15	-	2323	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	81.6694574305983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTGTTACAGTATGA	-42273101	False	NA	NA	False	AAGAAA	-11	NA	42273118	42211138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42272888
transcript_31635.nic	chr15	-	2293	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	80.5261093908604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTGTTACAGTATGA	-42269567	True	NA	NA	False	AAGAAA	-11	NA	42273451	42211138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_31636.known	chr15	-	3049	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	84.9517837102645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTAGATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	42273584	42210451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
transcript_31652.known	chr15	-	1598	7	FSM	ENSG00000103978.16	ENST00000307216.10	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	99.7307486296088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTAGCAGTTTGGTGT	-42269552	True	NA	NA	False	AGTAAA	-26	NA	42273436	42257934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_31658.nic	chr15	+	1814	6	NIC	ENSG00000214013.10	novel	1437	5	NA	NA	-13	-89	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	15.4790180567115	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATCAACACTATGCTT	42273049	True	NA	17	True	AATAAA	-21	NA	42273219	42284300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_42273612_42274167_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
transcript_31663.known	chr15	-	10396	22	FSM	ENSG00000103994.18	ENST00000564754.7	10396	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_18	28.2682325326778	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	-42482847	True	NA	-6	True	AATAAA	-18	NA	42491141	42412822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_31672.known	chr15	+	2310	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_5	38.4330852367635	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	42483585	True	NA	23	True	ATTAAA	-14	NA	42495633	42533058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
transcript_31679.known	chr15	+	2480	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	289.681290386521	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	42495291	False	NA	24	True	ATTAAA	-15	NA	42495305	42533059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
transcript_31686.known	chr15	+	775	6	FSM	ENSG00000092531.10	ENST00000564153.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_5	304.999672130971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTTTATTTTT	42483585	True	NA	NA	False	NA	NA	NA	42495633	42531827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42531412
transcript_31688.nic	chr15	+	621	6	NIC	ENSG00000092531.10	novel	775	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	308.593843101252	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGACTATTTGTTCT	42483536	True	NA	1	True	ATTAAA	-15	NA	42495584	42545347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42545135
transcript_31690.known	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_5	14.4968962195361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGTATTTGTCTT	-42547769	True	NA	-11	True	AATAAA	-22	NA	42548793	42537828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
transcript_31699.known	chr15	-	2407	6	FSM	ENSG00000180979.10	ENST00000563454.5	2407	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	36.0388679067476	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGCTGGAAGCAAGG	-42547748	True	NA	62	True	AATAAA	-14	NA	42548772	42542523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548666
transcript_3170.known	chr1	+	2060	10	FSM	ENSG00000171960.12	ENST00000676675.1	2060	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	142.261713267233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTAAGTTTTCAACTG	42658342	False	NA	-27	True	NA	NA	NA	42658367	42676713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675287
transcript_31700.known	chr15	+	626	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	48.7456550770311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACTGAGACAGA	42544365	True	NA	NA	False	NA	NA	NA	42548857	42566630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_31701.known	chr15	+	3921	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	14.505171491575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544345	True	NA	70	True	AATAAA	-21	NA	42548837	42569994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_31703.known	chr15	+	2853	6	FSM	ENSG00000137814.12	ENST00000391623.8	2853	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	51.581391993625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGTCTTGTGAATTC	42544345	True	NA	9	True	AATAAA	-19	NA	42548837	42568930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_31704.nic	chr15	+	842	5	ISM	ENSG00000137814.12	ENST00000564279.5	626	7	-64	4943	-34	0	5prime_fragment	TRUE	canonical	3	22	junction_3	48.1890807133732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544301	True	NA	5	True	AATAAA	-20	NA	42548793	42561687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269
transcript_31705.known	chr15	+	1702	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	41.8173110087198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAT	42544335	True	NA	NA	False	AATAAA	-4	NA	42548827	42567858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_31707.nic	chr15	+	753	4	ISM	ENSG00000137814.12	ENST00000260372.8	3921	6	-44	8307	-34	0	5prime_fragment	FALSE	canonical	3	103	junction_2	14.7648230602334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544301	True	NA	5	True	AATAAA	-20	NA	42548793	42561687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269
transcript_31708.known	chr15	+	709	4	FSM	ENSG00000137814.12	ENST00000568846.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	6.12825877028341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544341	True	NA	5	True	AATAAA	-20	NA	42548833	42561687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269
transcript_31709.nic	chr15	+	660	3	ISM	ENSG00000137814.12	ENST00000568876.5	1702	5	-34	6171	-34	0	5prime_fragment	FALSE	canonical	3	35	junction_1	41.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544301	True	NA	5	True	AATAAA	-20	NA	42548793	42561687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_42548966_42559338_42559409_42561269
transcript_3171.known	chr1	+	1036	10	FSM	ENSG00000171960.12	ENST00000678333.1	1036	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	140.722562178823	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCCTGTAATCCCAGC	42647845	True	NA	NA	False	NA	NA	NA	42658435	42676202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675732
transcript_31710.known	chr15	-	3332	29	FSM	ENSG00000159459.12	ENST00000546274.6	3332	29	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_22	5.83925840972209	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTTTTTAAATTG	-43104687	True	NA	NA	False	AATAAA	-23	NA	43106113	43015655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
transcript_31712.known	chr15	+	1831	11	FSM	ENSG00000166946.14	ENST00000565296.5	1831	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	67.3929521537675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	43182502	True	NA	NA	False	AATAAA	-21	NA	43185438	43195195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194462_43194726
transcript_31713.known	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	12.6130884401878	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	43182466	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_31714.known	chr15	+	1450	10	FSM	ENSG00000166946.14	ENST00000563065.5	1450	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	69.2164256535031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	43182469	True	NA	NA	False	AATAAA	-21	NA	43185405	43195195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_31717.known	chr15	+	577	4	FSM	ENSG00000166946.14	ENST00000566833.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	8.73053390247253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGACTTCCCATCTCCC	43182502	True	NA	NA	False	TATAAA	-34	NA	43185438	43189466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198
transcript_31718.known	chr15	+	1479	9	FSM	ENSG00000166946.14	ENST00000444658.7	1479	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	13.0192165662915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATGAGTGCCCTTCCA	43185881	True	NA	NA	False	AATAAA	-18	NA	43185939	43195192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_3172.known	chr1	+	754	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	28.5064428498299	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647832	True	NA	18	True	AATAAA	-18	NA	42658422	42676758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_31720.known	chr15	+	4268	13	FSM	ENSG00000168803.16	ENST00000562188.7	4268	13	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_2	8.31497978884428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTTATCATGAAATTC	43329452	True	NA	NA	False	NA	NA	NA	43330671	43354569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906_43349046_43350940_43351042_43351750
transcript_31727.known	chr15	+	3514	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	12.6065705025082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	43329454	True	NA	24	True	AATAAA	-14	NA	43330673	43353898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
transcript_31734.known	chr15	+	1559	10	FSM	ENSG00000168803.16	ENST00000389651.8	1559	10	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	13.7956872845945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	43329507	True	NA	3	True	ATTAAA	-16	NA	43330726	43349412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43330860_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_31743.nic	chr15	+	431	3	ISM	ENSG00000168803.16	ENST00000428046.7	3514	12	-24	20468	-22	1047	5prime_fragment	FALSE	canonical	3	32	junction_2	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTTTTTCCATTT	43329430	True	NA	NA	False	AAGAAA	-8	NA	43330649	43333430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_43330860_43331899_43332001_43333310
transcript_31749.nic	chr15	-	1087	4	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-80	58427	-10	6362	5prime_fragment	FALSE	canonical	3	173	junction_2	5.31245915016974	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGAGTATTATCAGAAC	-43485915	True	NA	NA	False	NA	NA	NA	43493166	43491075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_43491754_43492001_43492096_43492283_43492469_43493036
transcript_31751.known	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_12	10.6156507818641	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	43368684	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_31759.known	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	68.564649135769	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43593003	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_31761.known	chr15	+	1579	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_7	25.4506262201935	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43594007	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_31762.nic	chr15	+	1672	9	NIC	ENSG00000237289.10	novel	1579	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	83.2897802854588	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43594007	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_43594368_43594878_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_31765.nic	chr15	+	1904	10	NIC	ENSG00000223572.10	novel	1779	10	NA	NA	-188	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	76.1958166117786	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43692697	43699222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_43693104_43693939_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_31767.known	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	67.3126114061918	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43692885	43699222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_3177.known	chr1	+	849	10	FSM	ENSG00000171960.12	ENST00000677307.1	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	139.484058118252	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647856	True	NA	18	True	AATAAA	-18	NA	42658446	42676758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659371_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_31770.known	chr15	+	1579	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	25.4432579478336	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43693828	False	NA	20	True	AGTAAA	-20	NA	43693858	43699222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_31772.known	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7426	junction_3	389.321873047654	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	43671447	True	NA	17	True	AGTAAA	-19	NA	43746437	43773278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_31773.known	chr15	-	1755	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	4.67011777153425	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTCTGTGTCCTT	-43776626	True	NA	-31	True	ATTAAA	-2	NA	43776966	43772619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_31785.known	chr15	-	603	4	FSM	ENSG00000205771.7	ENST00000692045.1	925	4	36	286	12	-69	multi-exon	FALSE	canonical	3	10	junction_1	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTGCCTAGGTGAAT	-43746109	True	NA	NA	False	NA	NA	NA	43746285	43736797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43737009_43744394_43744569_43745021_43745168_43746213
transcript_31787.known	chr15	-	1653	4	FSM	ENSG00000205771.7	ENST00000381680.7	1657	4	4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCCGGGCTTGGTGGT	-43746126	True	NA	NA	False	ACTAAA	-23	NA	43746302	43735933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43737009_43744394_43744569_43745021_43745171_43746047
transcript_31792.known	chr15	+	586	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6398.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	43712924	True	NA	-1	True	NA	NA	NA	43792367	43793975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792579_43792974_43793084_43793709
transcript_31794.known	chr15	+	690	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	6382	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712924	True	NA	28	True	ATTAAA	-17	NA	43792367	43794046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792612_43792974_43793084_43793709
transcript_31795.known	chr15	+	2927	3	FSM	ENSG00000242028.8	ENST00000497142.2	2927	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1914	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	43753207	True	NA	NA	False	AATAAA	-18	NA	43800626	43804427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43800785_43801517_43801570_43801710
transcript_31796.known	chr15	-	1466	3	FSM	ENSG00000205771.7	ENST00000429276.1	1466	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGGAAGTGGGTAG	-43747081	True	NA	NA	False	AAAAAG	-6	NA	43747094	43743812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43744569_43745021_43745168_43746530
transcript_31799.known	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	4624.5	8029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712903	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792384_43792974_43793084_43793686
transcript_31800.known	chr15	+	2543	3	FSM	ENSG00000140264.21	ENST00000249786.9	2543	3	0	0	0	0	multi-exon	FALSE	canonical	3	9647	junction_1	1590.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTAGGATGTGTGT	43712876	True	NA	29	True	AATAAA	-36	NA	43792319	43796079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792384_43792974_43793084_43793709
transcript_31801.known	chr15	+	582	2	FSM	ENSG00000140264.21	ENST00000409614.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	12828	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43792791	False	NA	28	True	ATTAAA	-17	NA	43792838	43794046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43793084_43793709
transcript_31802.known	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	15.3622914957372	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	-43820248	True	NA	-1	True	ATTAAA	-25	NA	43824690	43804491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
transcript_31808.known	chr15	+	3932	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	16.0147501454822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	43825426	True	NA	4	True	AATAAA	-16	NA	43827001	43868412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_31809.known	chr15	+	2586	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	30.9528090629734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	43825404	True	NA	23	True	ATTAAA	-20	NA	43826979	43867018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_31810.known	chr15	-	396	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCATATGAAAGACTGAAA	-43876229	False	NA	NA	False	AAGAAA	-5	NA	43876244	43875848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43875800_43876200
transcript_31811.known	chr15	+	3974	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_8	24.9077309630644	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	NA	False	NA	10	True	AATAAA	-18	NA	44288718	44415758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
transcript_31814.known	chr15	+	6433	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	28.7793328623163	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	44420799	True	NA	15	True	AATAAA	-16	NA	44427628	44529038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
transcript_31822.known	chr15	-	1093	3	FSM	ENSG00000179523.6	ENST00000560750.1	1093	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	32	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAAAACAATGTACACA	-44536618	False	NA	NA	False	AAAACA	-20	NA	44536640	44527256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44527540_44535262_44535475_44536042
transcript_31824.known	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	-44536900	False	NA	-5	True	AATAAA	-19	NA	44536922	44534504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536042_44536359_44536800
transcript_31825.nnic	chr15	-	1031	3	NNC	ENSG00000179523.6	novel	1408	3	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	32	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGGAAGGAGGCAA	-44536902	False	NA	NA	False	NA	NA	NA	44536924	44535087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_44535475_44536042_44536359_44536596
transcript_31827.known	chr15	-	1288	3	FSM	ENSG00000179523.6	ENST00000653319.1	1288	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCTTTCTGCATATA	-44537024	False	NA	-27	True	NA	NA	NA	44537046	44534526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536042_44536359_44537022
transcript_3183.known	chr1	+	2315	9	FSM	ENSG00000171960.12	ENST00000678803.1	2315	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	30.2241625194148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGGATGACATCAAAAA	42647835	True	NA	NA	False	NA	NA	NA	42658425	42669179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350
transcript_31830.known	chr15	-	2863	2	FSM	ENSG00000179523.6	ENST00000313807.5	2873	2	10	0	-1	0	multi-exon	FALSE	canonical	3	66	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	-44536901	False	NA	NA	False	NA	NA	NA	44536923	44533492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536042
transcript_31831.known	chr15	-	500	2	FSM	ENSG00000179523.6	ENST00000559356.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAGTCAGGAAAAGG	-44536310	True	NA	NA	False	NA	NA	NA	44536894	44535068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536800
transcript_31832.known	chr15	-	570	2	FSM	ENSG00000179523.6	ENST00000558323.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATTGGAAGGAGGCA	-44535921	False	NA	NA	False	NA	NA	NA	44535943	44535088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44535759
transcript_3184.nnic	chr1	+	662	9	NIC	ENSG00000171960.12	novel	754	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	145.680247030955	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647831	True	NA	18	True	AATAAA	-18	NA	42658421	42676758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_31846.known	chr15	+	2479	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_6	63.5783302834594	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	44525290	True	NA	5	True	ATTAAA	-18	NA	44537146	44562803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_31853.known	chr15	+	925	7	FSM	ENSG00000104131.13	ENST00000535391.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	235.094839018923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGCAACGTGACAAAAAA	44525326	True	NA	NA	False	ACTAAA	-13	NA	44537182	44561447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44560248_44560323_44561017
transcript_31858.known	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	225.442320782944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	44525268	True	NA	-63	True	TATAAA	-33	NA	44537124	44561999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_31864.nic	chr15	+	348	3	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-134	10517	-76	-3644	5prime_fragment	FALSE	canonical	3	605	junction_1	25.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCACTGGGGCGCCTC	44525192	True	NA	NA	False	AGTAAA	-6	NA	44537048	44550930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_44537238_44537323_44537428_44550875
transcript_31865.known	chr15	+	943	4	FSM	ENSG00000166710.22	ENST00000648006.3	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	2883	junction_2	77.7988860245869	867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	44693973	True	NA	33	True	AATAAA	-14	NA	44711516	44718145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44711614_44715422_44715702_44716328_44716357_44717606
transcript_31867.known	chr15	+	3190	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	NA	False	NA	1	True	AATAAA	-12	NA	44729000	44734000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44729553_44731362
transcript_31874.known	chr15	+	4758	9	FSM	ENSG00000140263.15	ENST00000674405.1	4758	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	112.035429664013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTGCATATTTTTGT	45014684	True	NA	NA	False	AATAAA	-14	NA	45023167	45077172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45068979_45072316_45072439_45073364
transcript_31879.known	chr15	+	4818	9	FSM	ENSG00000140263.15	ENST00000267814.14	4818	9	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_7	54.9907662703476	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	45014711	True	NA	NA	False	AATAAA	-27	NA	45023194	45077185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45069053_45072316_45072439_45073364
transcript_31885.known	chr15	-	2062	6	FSM	ENSG00000138606.20	ENST00000560540.5	2062	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	42.5318704032635	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	-45186342	True	NA	-10	True	TATAAA	-39	NA	45187956	45167213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_45168134_45171882_45172003_45172148_45172319_45175218_45175426_45178164_45178307_45187453
transcript_31887.known	chr15	-	2348	9	FSM	ENSG00000171766.17	ENST00000396659.8	2348	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.39531046372681	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATTGGTCTAGTCAT	-45377839	True	NA	-4	True	AATAAA	-21	NA	45378544	45361123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
transcript_3189.known	chr1	+	806	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	28.5194560782635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	42658639	True	NA	17	True	AATAAA	-17	NA	42658700	42676757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_31891.known	chr15	+	1839	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	45.088801270382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATT	45583499	True	NA	NA	False	NA	NA	NA	45587378	45607773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
transcript_31894.known	chr15	+	494	5	FSM	ENSG00000104164.12	ENST00000562384.5	494	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.0644825967316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTCTCCTGTCC	45583472	True	NA	NA	False	NA	NA	NA	45587351	45606527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45597879_45597892_45603099_45603188_45605427_45605515_45606394
transcript_31895.known	chr15	+	557	5	FSM	ENSG00000104164.12	ENST00000569076.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.0644825967316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGCCAGACCAGCCAAAA	45583473	True	NA	71	True	NA	NA	NA	45587352	45606486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45597879_45597997_45603099_45603188_45605427_45605515_45606394
transcript_31896.known	chr15	+	3838	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.1214429522755	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	45583710	False	NA	7	True	AATAAA	-15	NA	45587589	45609708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_31898.known	chr15	+	616	5	FSM	ENSG00000104164.12	ENST00000565409.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	45.2789962344573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTATGTCATATGTTGA	45587521	True	NA	NA	False	NA	NA	NA	45587784	45606601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587877_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_31900.known	chr15	+	592	4	FSM	ENSG00000104164.12	ENST00000568597.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	52.3152835115025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATATGTTGAAATCCT	45583496	True	NA	NA	False	NA	NA	NA	45587375	45606607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45592134_45592277_45605427_45605515_45606394
transcript_31902.known	chr15	+	1052	4	FSM	ENSG00000104164.12	ENST00000567461.5	1052	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.1333722286915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAGAGGTAAACCTTT	45587131	True	NA	NA	False	AAGAAA	-28	NA	45587235	45606981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45603099_45603188_45605427_45605515_45606394
transcript_31905.known	chr15	+	1051	3	FSM	ENSG00000104164.12	ENST00000567740.5	1051	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	62.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGATACTCTTTATTA	45587202	False	NA	NA	False	NA	NA	NA	45587213	45607046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45605427_45605515_45606394
transcript_31908.known	chr15	+	1701	10	FSM	ENSG00000137767.14	ENST00000260324.12	1701	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.496903994999953	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCTATGAGAAAATT	45635009	True	NA	28	True	AATAAA	-44	NA	45635028	45691281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45635109_45658906_45659158_45661954_45662126_45669927_45669982_45673606_45673802_45676100_45676311_45682477_45682662_45688336_45688405_45689038_45689218_45690972
transcript_31909.nic	chr15	+	1531	3	ISM	ENSG00000074803.21	ENST00000560692.5	8632	22	74816	0	66417	0	3prime_fragment	FALSE	canonical	2	8	junction_1	4	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGCCTAGGTCATG	NA	False	NA	3	True	AATAAA	-16	NA	48299141	48304078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_48299276_48301314_48301383_48302749
transcript_31910.known	chr15	-	10137	17	FSM	ENSG00000104177.19	ENST00000324324.12	10137	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	51.2797169941489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTAGTGCCCTGTTGTCC	-48169183	True	NA	-4	True	AATAAA	-15	NA	48178295	48134631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
transcript_31911.known	chr15	-	2958	16	FSM	ENSG00000104177.19	ENST00000267836.10	2958	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.9836033336939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTTATTTGTTGCTTT	-48169241	True	NA	NA	False	ATTAAA	-19	NA	48178353	48141796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
transcript_31912.known	chr15	+	2634	2	FSM	ENSG00000233932.6	ENST00000645050.1	2634	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACTCTACCATAATA	48178450	False	NA	NA	False	NA	NA	NA	48178466	48203697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48178647_48201243
transcript_31913.known	chr15	+	769	7	FSM	ENSG00000128951.14	ENST00000558813.5	769	7	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_1	713.411152297343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTTCCGCAATTG	48331377	False	NA	NA	False	ATTAAA	-45	NA	48331404	48342293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48331480_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_31916.known	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_4	124.589566176305	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	48332079	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_31919.nnic	chr15	+	948	2	NNC	ENSG00000255302.5	novel	584	2	NA	NA	-42	-540	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGCTATATCTAAAAAGACT	48854645	True	NA	8	True	AATAAA	-17	NA	48878091	48879633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_48878273_48878866
transcript_3192.known	chr1	-	2841	5	FSM	ENSG00000164007.11	ENST00000296387.6	2841	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	7.79021822544144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42739589	True	NA	NA	False	NA	NA	NA	42740236	42733092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42735135_42735877_42736031_42738228_42738314_42738420_42738586_42739840
transcript_31920.nnic	chr15	+	1120	2	NNC	ENSG00000255302.5	novel	584	2	NA	NA	-42	-368	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTGGCTAATAGTAT	48854645	True	NA	25	True	AATAAA	-18	NA	48878091	48879805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_48878273_48878866
transcript_31921.known	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	48854687	True	NA	7	True	AGTAAA	-20	NA	48878133	48880173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48878100_48880200
transcript_31922.nic	chr15	-	1894	12	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-67	24061	-66	-1152	5prime_fragment	FALSE	canonical	2	3	junction_1	2.55193979047604	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAGAAGGAAATTGC	-49043674	True	NA	NA	False	NA	NA	NA	49046513	49012698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_31927.nic	chr15	+	2099	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	21.8451367585557	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTATTCTTGAATAGA	NA	False	NA	2	True	ATTAAA	-37	NA	49155733	49328529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_49156017_49161739_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_3193.known	chr1	-	1586	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCATTCGGTCTG	-42740123	False	NA	0	True	NA	NA	NA	42740140	42734994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
transcript_31931.nic	chr15	+	2035	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.6154610372104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTATTCTTGAATAGA	49155118	True	NA	2	True	ATTAAA	-37	NA	49155773	49328529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_49156017_49161763_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_31934.known	chr15	+	5299	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1656117720877	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	49155109	True	NA	NA	False	AATAAA	-18	NA	49155764	49331882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_31935.known	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	12.5766783971831	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	49169856	True	NA	NA	False	AATAAA	-18	NA	49170246	49331882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_31936.known	chr15	+	1834	10	FSM	ENSG00000156958.15	ENST00000396509.6	1834	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.6698110409314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	49169813	True	NA	7	True	ATTAAA	-22	NA	49170203	49328514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49170359_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_3194.known	chr1	-	2726	14	FSM	ENSG00000117385.16	ENST00000460031.5	2726	14	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_9	32.05191794241	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-42761738	True	NA	-21	True	AATAAA	-20	NA	42766989	42746373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_31942.known	chr15	+	1768	10	FSM	ENSG00000156958.15	ENST00000559454.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.0314285690326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAAACTGATACCACTG	49170087	False	NA	-4	True	ATTAAA	-11	NA	49170477	49328503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49170578_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_31944.known	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.353780178664	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	-49149722	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_31945.known	chr15	-	2036	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.946533051778	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	-49149784	True	NA	-6	True	AATAAA	-17	NA	49155661	49127349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_31959.known	chr15	-	792	8	FSM	ENSG00000166262.16	ENST00000559905.5	792	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.44358825235933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAAATATTTCATTTT	-49620728	False	NA	NA	False	TTTAAA	-17	NA	49620747	49576740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620133_49620191_49620630
transcript_31966.nic	chr15	-	1477	7	NIC	ENSG00000166262.16	novel	1139	8	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.13991411612474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620546	True	NA	-20	True	ATTAAA	-16	NA	49620855	49576135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_49576846_49577171_49577306_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620699
transcript_31967.nic	chr15	-	1457	7	ISM	ENSG00000166262.16	ENST00000561064.5	1596	11	65	153736	33	0	5prime_fragment	FALSE	canonical	2	4	junction_4	3.8151743807532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620555	True	NA	-20	True	ATTAAA	-16	NA	49620864	49576135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620630
transcript_3197.known	chr1	+	4760	5	FSM	ENSG00000164008.17	ENST00000372525.7	4760	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	19.9624647776771	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTAGATGATGCTTGA	42765238	True	NA	NA	False	AATAAA	-23	NA	42767248	42779491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208
transcript_31971.nnic	chr15	-	1118	6	NNC	ENSG00000166262.16	novel	3316	16	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_3	16.4268073587049	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	-49396273	False	NA	-1	True	AATAAA	-23	NA	49396457	49328392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367554_49371301_49371400_49395974
transcript_31972.nic	chr15	-	1173	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_3	14.4360659460949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	-49396273	False	NA	-1	True	AATAAA	-23	NA	49396457	49328392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49395974
transcript_31973.nic	chr15	-	1147	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	3.00665927567458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620546	True	NA	-20	True	ATTAAA	-16	NA	49620855	49576135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120_49615244_49620699
transcript_31976.nic	chr15	-	934	4	ISM	ENSG00000166262.16	ENST00000559573.3	2204	5	-15	1431	-15	0	intron_retention	FALSE	canonical	3	13	junction_2	11.7284080571728	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	-49396273	False	NA	-1	True	AATAAA	-23	NA	49396457	49328392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974
transcript_31980.nic	chr15	+	1177	6	NIC	ENSG00000104047.15	novel	1201	6	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_2	179.446259364747	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATATATAATGCCTGT	49617387	True	NA	22	True	AATAAA	-33	NA	49621052	49643657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535_49634795_49643330
transcript_31984.known	chr15	+	13776	6	FSM	ENSG00000104047.15	ENST00000251250.7	13776	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	186.261107051365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	49617433	True	NA	NA	False	AATAAA	-20	NA	49621098	49656232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49623670_49623799_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_31985.known	chr15	+	13699	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	19.4470434770944	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	49617382	True	NA	NA	False	AATAAA	-20	NA	49621047	49656232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_31989.known	chr15	+	1131	5	FSM	ENSG00000104047.15	ENST00000558653.5	1131	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	164.503799348222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACATTAATAAACTTAT	49617399	True	NA	-25	True	NA	NA	NA	49621064	49643610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621194_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_31997.known	chr15	+	552	4	FSM	ENSG00000104047.15	ENST00000560632.5	552	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	193.36379070435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGGATTCAAAATAA	49617416	True	NA	NA	False	AATAAA	-20	NA	49621081	49634595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49625112_49625432_49632170_49632303_49634535
transcript_31998.known	chr15	+	2384	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	7.24866952457782	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	50181716	True	NA	10	True	ATTAAA	-18	NA	50182195	50236385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_32.known	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00079_+_0_600
transcript_32002.known	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	51.6690187636653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-50351634	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32003.known	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	49.7242395618073	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-50351679	True	NA	-11	True	AATAAA	-17	NA	50355198	50275388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32004.known	chr15	-	1412	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	89.0118496325068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATGAATGAATGAGTG	-50355162	False	NA	NA	False	AATAAA	-6	NA	50355202	50285893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_32005.nic	chr15	-	1476	9	NIC	ENSG00000104064.18	novel	1633	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	85.108662161968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTGAGTGAAGAATTT	-50355175	False	NA	NA	False	AATAAA	-18	NA	50355215	50285881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_32010.known	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	44.7172522977567	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351634	True	NA	NA	False	AATAAA	-20	NA	50355153	50285879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32011.known	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	41.7284711692443	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351679	True	NA	NA	False	AATAAA	-20	NA	50355198	50285879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32018.nic	chr15	+	1258	3	NIC	ENSG00000244879.9	novel	2277	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353286	True	NA	7	True	ATTAAA	-19	NA	50355459	50371343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_50355546_50356099_50356258_50370329
transcript_32019.nnic	chr15	+	1306	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	6.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353286	True	NA	7	True	ATTAAA	-19	NA	50355459	50371343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_50355546_50356099_50356308_50370331
transcript_32020.known	chr15	+	2277	3	FSM	ENSG00000244879.9	ENST00000648591.1	2277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCATCTCACTTTCAG	50353302	True	NA	NA	False	AATATA	-3	NA	50355475	50372158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355766_50356099_50356258_50370329
transcript_32022.nnic	chr15	+	1526	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	29.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353286	True	NA	7	True	ATTAAA	-19	NA	50355459	50371343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_50355766_50356099_50356308_50370331
transcript_32023.known	chr15	+	1098	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353286	True	NA	7	True	ATTAAA	-19	NA	50355459	50371343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355546_50370331
transcript_32024.known	chr15	+	16182	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACTTGTCTTTGTCCT	50353293	True	NA	NA	False	CATAAA	-17	NA	50355466	50372202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355546_50356099
transcript_32025.known	chr15	+	709	2	FSM	ENSG00000244879.9	ENST00000560359.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGGCTGTGTTTTCTTTT	50355293	False	NA	10	True	ATTAAA	-36	NA	50355327	50356370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355766_50356099
transcript_32026.nic	chr15	+	1869	12	NIC	ENSG00000138592.14	novel	1917	12	NA	NA	0	71	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	85.0769219273247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAGAAGCTGAAGAAA	50418250	True	NA	59	True	AAAAAG	-8	NA	50424386	50481776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32027.nic	chr15	+	1921	12	NIC	ENSG00000138592.14	novel	1917	12	NA	NA	0	123	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	85.0769219273247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAATGGAGAAGAAAGA	50418250	True	NA	111	True	AAAAAG	-6	NA	50424386	50481828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32028.nic	chr15	+	1618	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32739	0	0	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	50418245	True	NA	-35	True	AAGAAA	-37	NA	50424381	50481682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32029.nic	chr15	+	1712	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32645	0	71	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAGAAGCTGAAGAAA	50418245	True	NA	59	True	AAAAAG	-8	NA	50424381	50481776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_3203.known	chr1	-	610	5	FSM	ENSG00000228192.9	ENST00000444563.6	646	5	33	3	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.61248608016091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	-42846052	True	NA	NA	False	AATAAA	-18	NA	42846387	42841897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844685_42846256
transcript_32030.nic	chr15	+	1764	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32593	0	123	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAATGGAGAAGAAAGA	50418245	True	NA	111	True	AAAAAG	-6	NA	50424381	50481828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32031.known	chr15	+	19026	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	60.6823617740024	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGTGTCTCATACCT	50418245	True	NA	NA	False	AATAAA	-15	NA	50424381	50514419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_32034.known	chr15	+	1568	10	FSM	ENSG00000138592.14	ENST00000625664.2	1568	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	88.9058317186238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	50418290	True	NA	-35	True	AAGAAA	-37	NA	50424426	50481682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424655_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32039.known	chr15	-	10382	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_11	14.2043115065096	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATCAAGTAATTATTT	-50681718	True	NA	NA	False	AATAAA	-21	NA	50686797	50557157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_32042.known	chr15	-	7270	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	18.3871350322414	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTGTTTTATTTTG	-50761550	True	NA	-14	True	AATAAA	-19	NA	50765706	50702265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_32046.known	chr15	+	3160	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	37.2323506360302	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	51681444	True	NA	20	True	AATAAA	-16	NA	51681502	51721026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_32051.known	chr15	+	2163	11	FSM	ENSG00000104112.9	ENST00000542355.6	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	172.053015085467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGGATCCAGGTAAA	51681468	False	NA	NA	False	NA	NA	NA	51681491	51720071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51681838_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_32056.nic	chr15	+	941	7	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	180	28690	151	0	5prime_fragment	FALSE	canonical	3	524	junction_5	41.5548499643009	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACTGTGTGGTTGTG	51676467	True	NA	7	True	NA	NA	NA	51681682	51692336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158
transcript_32057.nic	chr15	+	515	4	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	-11	37738	0	-9048	5prime_fragment	TRUE	canonical	3	603	junction_3	19.6185852927495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAATTGAGAAAGAAA	51681468	False	NA	NA	False	NA	NA	NA	51681491	51683288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218
transcript_32058.known	chr15	-	1228	3	FSM	ENSG00000140280.14	ENST00000454181.6	1228	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	NA	False	NA	-11	True	AATAAA	-41	NA	51751585	51723068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51723650_51724789_51725122_51751270
transcript_32059.known	chr15	+	8232	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	31.3538152127466	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	51818758	True	NA	30	True	AATAAA	-22	NA	51829652	51915725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
transcript_32066.nic	chr15	+	567	3	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-27	46353	-2	6389	5prime_fragment	FALSE	canonical	3	379	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCCCCAGAATTTTAA	NA	False	NA	NA	False	CATAAA	-40	NA	51829625	51869372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51829837_51862810_51863011_51869216
transcript_32067.nic	chr15	+	1682	2	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-27	51444	-2	1298	5prime_fragment	FALSE	canonical	3	382	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGGAAAAAGCATAAGAC	NA	False	NA	NA	False	NA	NA	NA	51829625	51864281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51829837_51862810
transcript_32069.nnic	chr15	-	1242	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5584	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.82222121285516	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	-51936027	True	NA	NA	False	AATAAA	-17	NA	51936211	51918962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_51919144_51922724_51922909_51924039_51924179_51925744_51925882_51926777_51926873_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_3207.nnic	chr1	+	677	4	FSM	ENSG00000164008.17	ENST00000691126.1	639	4	-34	-4	3	0	multi-exon	FALSE	canonical	3	31	junction_1	72.6192505851965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTATGACTTTTA	42765241	True	NA	NA	False	NA	NA	NA	42767251	42775527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42767391_42773562_42773650_42774736_42774869_42775208
transcript_32070.known	chr15	+	5330	6	FSM	ENSG00000069956.14	ENST00000261845.7	5330	6	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_1	60.4694964424213	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTCCACTTGCAATC	52011422	True	NA	6	True	AATAAA	-19	NA	52019218	52067375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52019377_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_32082.known	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_8	43.9830921684028	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964690	True	NA	-2	True	AATAAA	-16	NA	51971778	51938024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_32083.nnic	chr15	-	2233	12	NNC	ENSG00000166477.13	novel	2165	12	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	146.353133445859	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964733	True	NA	-2	True	AATAAA	-16	NA	51971821	51938024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_51938286_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_32087.known	chr15	-	1981	10	FSM	ENSG00000166477.13	ENST00000315141.5	1981	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	178.591678569638	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTCTATGTTTAAGAAA	-51964688	True	NA	-4	True	AATAAA	-14	NA	51971776	51938026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_32091.known	chr15	-	1249	2	FSM	ENSG00000137875.4	ENST00000260442.3	1249	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTGTCTTTCCTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	52112775	52109262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52109974_52112237
transcript_32092.known	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_6	17.9454729667401	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	NA	False	NA	-6	True	NA	NA	NA	52180001	52122205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_32102.known	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-52175395	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52149926_52153939_52154077_52179767
transcript_32104.known	chr15	-	718	4	FSM	ENSG00000128989.11	ENST00000564163.5	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	702.431174959907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGAGCAACATAAGTAAA	-52546084	True	NA	NA	False	NA	NA	NA	52569015	52551734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52564189_52564247_52568847
transcript_32105.known	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	714.238211118827	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	-52569144	False	NA	NA	False	TTTAAA	-45	NA	52569167	52551593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
transcript_32108.known	chr15	-	5366	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_1	60.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCATCTTATTTGT	-52546099	True	NA	-8	True	ATTAAA	-17	NA	52569030	52547044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52568847
transcript_32109.known	chr15	-	275	3	FSM	ENSG00000128989.11	ENST00000567830.1	275	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCACATTCCCACTCC	-52569144	False	NA	NA	False	NA	NA	NA	52569167	52552008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52569111
transcript_32112.known	chr15	-	4217	13	FSM	ENSG00000047346.13	ENST00000261844.11	4217	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	7.01338006955277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTACTTGGCTTTT	-52678221	False	402	NA	False	AATATA	-16	NA	52678623	52581320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678571
transcript_32114.known	chr15	-	959	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	376	2	279	-2	multi-exon	FALSE	canonical	3	56	junction_1	29	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	-52804601	False	NA	-12	True	AATAAA	-16	NA	52804613	52800167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52800918_52804208_52804298_52804493
transcript_32115.known	chr15	-	2130	3	FSM	ENSG00000259203.3	ENST00000660503.2	2211	3	0	81	0	-77	multi-exon	TRUE	canonical	2	7	junction_1	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTCATCAGTCAGAG	-52805239	False	NA	-78	True	NA	NA	NA	52805251	52802564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52803848_52804208_52804298_52804493
transcript_32119.known	chr15	-	4333	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	41	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTGTTTGTTT	-53540332	True	NA	NA	False	ATTAAA	-16	NA	53541103	53513740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_53517755_53523217_53523323_53540889
transcript_32120.known	chr15	-	4224	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	26.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTTTTGTTTGTT	-53540309	True	NA	NA	False	ATTAAA	-15	NA	53541080	53513741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_53517755_53523217_53523323_53540974
transcript_32125.known	chr15	-	1395	6	FSM	ENSG00000137876.11	ENST00000677730.1	1395	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	795.440657748898	2908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATATTTATTCTTTA	-55179700	True	NA	-1	True	AATAAA	-16	NA	55196958	55181314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55182220_55183310_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
transcript_3213.known	chr1	+	768	3	FSM	ENSG00000164008.17	ENST00000650521.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	84	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	42765295	True	NA	26	True	CATAAA	-42	NA	42767305	42775759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42767391_42774736_42774869_42775208
transcript_32134.known	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	9.38083151964686	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-55289250	True	NA	3	True	AATAAA	-22	NA	55289813	55202965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
transcript_32137.nnic	chr15	-	973	6	NIC	ENSG00000069974.16	novel	3447	7	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	16.9351705040132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCAGCTTTGTAAAT	-55289279	True	NA	0	True	AATAAA	-21	NA	55289842	55205348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55289715
transcript_32138.nnic	chr15	-	771	5	NNC	ENSG00000256061.7	novel	672	5	NA	NA	-14	12099	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	5.30919014539883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTTGTTTTAAAATT	-55497903	True	NA	NA	False	AATAAA	-16	NA	55498391	55454861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_55454934_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32139.nic	chr15	-	908	4	ISM	ENSG00000256061.7	ENST00000457155.6	1567	8	-14	36413	-14	240	5prime_fragment	FALSE	canonical	3	15	junction_1	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGAAAAGAAGAGTGTCTT	-55497903	True	NA	NA	False	AATAAA	-24	NA	55498391	55466720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32142.known	chr15	+	1910	12	FSM	ENSG00000069943.10	ENST00000164305.10	1910	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	14.6851248738982	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAGTTTTATTGTTTC	55318968	True	NA	14	True	AATAAA	-19	NA	55319221	55355648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_55319414_55320274_55320411_55321272_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_32150.known	chr15	-	3553	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	19.4164878389476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCAGTCAATTTT	-55406692	True	NA	-20	True	AATAAA	-33	NA	55408359	55355238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_32153.known	chr15	-	1897	9	FSM	ENSG00000256061.7	ENST00000348518.4	1897	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	6.23999198717434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	NA	False	NA	NA	False	AATAAA	-15	NA	55498601	55430307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32155.known	chr15	-	6822	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	7.90504876128967	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTGAGTACTGTTT	NA	False	NA	-31	True	AATAAA	-22	NA	55408510	55355249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_32158.known	chr15	-	1567	8	FSM	ENSG00000256061.7	ENST00000457155.6	1567	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.55388803794416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-55497889	True	NA	NA	False	AATAAA	-15	NA	55498377	55430307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55430780_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32160.nnic	chr15	-	1315	7	NIC	ENSG00000256061.7	novel	1897	9	NA	NA	-20	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_4	6.04611904907235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-55497909	True	NA	NA	False	AATAAA	-15	NA	55498397	55430307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55491122_55491257_55497711_55497860_55498206
transcript_32163.known	chr15	+	868	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAAAGCCTTTCATAT	NA	False	NA	92	True	AATAAA	-35	NA	55408494	55418798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_55408787_55418222
transcript_32164.known	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	-55317702	True	NA	0	True	AATAAA	-27	NA	55319123	55317183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55317868_55318863
transcript_32165.known	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-55317740	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55317868_55318906
transcript_32166.known	chr15	-	406	1	FSM	ENSG00000277548.1	ENST00000618841.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATCATGTTCATCAGAC	NA	False	NA	-2	True	AATAAA	-20	NA	55346752	55346346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55346300_55346800
transcript_3217.known	chr1	-	650	3	FSM	ENSG00000177868.12	ENST00000372522.5	650	3	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42811656	False	NA	-35	True	AATAAA	-17	NA	42816804	42807051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42807501_42816430_42816581_42816753
transcript_32172.known	chr15	-	2030	10	FSM	ENSG00000138587.6	ENST00000260453.4	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	9.98888270918113	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTTTTGGTCTACTG	-56464384	True	NA	-2	True	AATAAA	-22	NA	56465137	56428723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_56429194_56431372_56431499_56434137_56434396_56443429_56443538_56443637_56443855_56444443_56444674_56446840_56446944_56456393_56456522_56464025_56464248_56464969
transcript_32177.known	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.0332871651931	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	-56731637	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
transcript_32178.nic	chr15	-	1736	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-111	33329	-41	1349	5prime_fragment	FALSE	canonical	3	33	junction_4	11.3419575030063	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTACACTTGAATGTGT	-56731761	True	NA	-8	True	ATTAAA	-20	NA	56733618	56699823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_3218.known	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	23	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812249	True	NA	-35	True	AATAAA	-17	NA	42817397	42807051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42807501_42816430_42816581_42817189
transcript_32180.nic	chr15	-	583	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-111	34482	-41	196	5prime_fragment	FALSE	canonical	3	33	junction_4	11.3419575030063	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGATAGTTCTGTT	-56731761	True	NA	-11	True	AATAAA	-18	NA	56733618	56700976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_32181.known	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	-56917265	True	NA	-17	True	AATAAA	-19	NA	56918493	56916725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_56917213_56917539
transcript_32182.known	chr15	+	596	2	FSM	ENSG00000276524.1	ENST00000621974.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCCAGGCTCTG	56887022	False	NA	38	True	AATAAA	-15	NA	56887106	56888219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_56887171_56887687
transcript_32183.known	chr15	+	6061	20	FSM	ENSG00000140262.18	ENST00000267811.9	6061	20	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_14	41.4524391217365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	56918363	False	NA	NA	False	AATAAA	-37	NA	56918624	57289853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32185.known	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	78.0612295288484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	57218688	True	NA	9	True	AATAAA	-18	NA	57219465	57288506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32187.known	chr15	+	1809	14	FSM	ENSG00000140262.18	ENST00000543579.5	1809	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	79.9995562117868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAAAACAAAACACT	57218652	True	NA	NA	False	NA	NA	NA	57219429	57286251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32189.known	chr15	+	2530	3	FSM	ENSG00000247982.7	ENST00000501726.2	2538	3	0	8	0	3	multi-exon	FALSE	canonical	0	0	junction_1	18.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGTGGCTTGTG	NA	False	NA	NA	False	AATAAA	-30	NA	57300364	57307761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57300925_57305318_57307069_57307541
transcript_3219.nnic	chr1	-	783	3	NNC	ENSG00000177868.12	novel	807	3	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	267.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812200	True	NA	-35	True	AATAAA	-17	NA	42817348	42807051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_42807501_42816430_42816606_42817189
transcript_32190.known	chr15	+	1470	1	FSM	ENSG00000247982.7	ENST00000613170.1	1470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTTTCATGT	NA	False	NA	NA	False	AATAAA	-38	NA	57306299	57307769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57306300_57307800
transcript_32191.nnic	chr15	+	831	7	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9080	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.2699670020026	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57385118	True	NA	22	True	AGTAAA	-16	NA	57386225	57407282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57386301_57396923_57397107_57398340_57398431_57402018_57402039_57402660_57402715_57405965_57406065_57406972
transcript_32192.nnic	chr15	+	524	4	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	11.6714276000077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57372883	True	NA	22	True	AGTAAA	-16	NA	57376506	57407282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_57376568_57402660_57402715_57405965_57406065_57406972
transcript_32193.nnic	chr15	+	551	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9067	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.1993265821489	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57385105	True	NA	22	True	AGTAAA	-16	NA	57386212	57407282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57386301_57402660_57402715_57405965_57406065_57406972
transcript_32194.nnic	chr15	+	678	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	10867	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.7756811551038	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57387846	True	NA	22	True	AGTAAA	-16	NA	57388012	57407282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57388228_57402660_57402715_57405965_57406065_57406972
transcript_32197.known	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	25.2994412664601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	57372881	True	NA	9	True	AATAAA	-20	NA	57376504	57550717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
transcript_32198.nnic	chr15	+	2415	5	NNC	ENSG00000255529.9	novel	4114	4	NA	NA	-30	-1303	at_least_one_novel_splicesite	FALSE	canonical	2	45	junction_2	93.7586662661111	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCTGTAGGATATTTTA	57701667	True	NA	3	True	ATTAAA	-15	NA	57706664	57716251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57706956_57708713_57708743_57709184_57709359_57711983_57712189_57714535
transcript_3220.known	chr1	-	708	3	FSM	ENSG00000177868.12	ENST00000497437.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGGTAGATGGTGTT	-42812104	True	NA	NA	False	NA	NA	NA	42817252	42813409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42813905_42816430_42816581_42817189
transcript_32200.known	chr15	+	4114	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	28.2960539062723	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTTTGGTGTCTTTC	57701716	True	NA	NA	False	TATAAA	-18	NA	57706713	57717557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
transcript_32203.known	chr15	+	1648	4	FSM	ENSG00000255529.9	ENST00000494490.2	1648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.167419352646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGGTATTAAAATTTT	57701697	True	NA	-15	True	NA	NA	NA	57706694	57714882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57707146_57708713_57709359_57711983_57712189_57714535
transcript_32204.known	chr15	+	3629	4	FSM	ENSG00000255529.9	ENST00000380557.4	3629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.167419352646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTCGTGTTTGGTGTCT	57701727	True	NA	NA	False	TATAAA	-15	NA	57706724	57717554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57706956_57709184_57709359_57711983_57712189_57714535
transcript_32205.known	chr15	-	11158	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_9	66.4514526218619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTTGTGGATGAA	-58739818	True	NA	-1	True	AATAAA	-14	NA	58749707	58588808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_32213.known	chr15	-	1932	2	FSM	ENSG00000137845.15	ENST00000461408.2	1932	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGTCACTGTTGTGT	-58739830	True	NA	2	True	AATAAA	-28	NA	58749719	58747344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58749037_58749479
transcript_32214.known	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	276.71313665961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	-58739881	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_32215.known	chr15	+	5905	14	FSM	ENSG00000157450.16	ENST00000348370.9	5905	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	23.9980275323575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTACTCTGGTGACTTT	58983553	True	NA	98	True	GATAAA	-19	NA	58987662	59097419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
transcript_32218.known	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	18.060661671157	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58770065	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
transcript_3222.known	chr1	-	536	5	FSM	ENSG00000228192.9	ENST00000425076.1	536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.61248608016091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	-42846052	True	NA	NA	False	AATAAA	-18	NA	42846387	42841897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844611_42846256
transcript_32220.known	chr15	-	3021	19	FSM	ENSG00000137776.17	ENST00000557924.5	3021	19	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_18	149.926576680259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGTTCATTGCATTTC	-58924608	True	NA	NA	False	NA	NA	NA	58933599	58879559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58933403
transcript_32221.known	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_15	75.2750954831676	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	-58924688	True	NA	-28	True	AATAAA	-16	NA	58933679	58879049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_32222.known	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_12	30.6448303004383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-59370805	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_32223.known	chr15	-	578	2	FSM	ENSG00000157483.9	ENST00000558646.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTATGCTGGGTGC	-59370805	True	NA	NA	False	NA	NA	NA	59372871	59272245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59272450_59372497
transcript_32224.known	chr15	+	1488	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	42.4497865130085	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGTGTATTTATTTGT	59091902	True	NA	17	True	AATAAA	-23	NA	59105145	59125045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
transcript_32225.known	chr15	+	2503	8	FSM	ENSG00000157456.8	ENST00000621385.1	2503	8	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	41.8173872635656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATGTGTATTTATTTG	59092025	False	NA	16	True	AATAAA	-22	NA	59105268	59125044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516
transcript_32229.known	chr15	-	2515	10	FSM	ENSG00000140299.13	ENST00000612191.4	2515	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	28.5298197905972	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGTTTAATTACC	NA	False	NA	NA	False	AATAAA	-17	NA	59689443	59662864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_3223.known	chr1	+	3440	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.96536480550911	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	42816838	True	NA	21	True	AATAAA	-22	NA	42817121	42844991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
transcript_32236.known	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	587.497268078755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	-59645128	True	NA	-20	True	AATAAA	-16	NA	59657514	59638868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
transcript_32237.known	chr15	-	758	5	FSM	ENSG00000140307.11	ENST00000396061.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_4	501.716304299551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTTCTGTTATTCAT	-59645093	True	NA	NA	False	AATAGA	-19	NA	59657479	59639108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657123
transcript_32238.known	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	69.3194597497701	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	-59645129	True	NA	-3	True	AATAAA	-18	NA	59657515	59638061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
transcript_3224.known	chr1	+	1859	4	FSM	ENSG00000164011.18	ENST00000372506.5	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.2659863237109	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843429	True	NA	NA	False	AGTAAA	-16	NA	42846627	42852477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
transcript_32243.known	chr15	-	408	4	FSM	ENSG00000140307.11	ENST00000484743.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	585.239741948166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACCATCTTCTGTTAT	-59645134	True	NA	NA	False	AATAGA	-15	NA	59657520	59639112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59652205_59652327_59657405
transcript_32245.known	chr15	-	633	4	FSM	ENSG00000140307.11	ENST00000396064.7	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	600.816296568446	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTGGTGAAGCTAT	-59645134	True	NA	-17	True	AATAAA	-19	NA	59657520	59638865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59650668_59650774_59652205_59652327_59657405
transcript_32247.known	chr15	-	518	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	554.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAAGCTATTAAGGTA	-59645111	True	NA	-10	True	AATAAA	-26	NA	59657497	59638858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59657405
transcript_32249.known	chr15	-	1278	2	FSM	ENSG00000140307.11	ENST00000480768.1	1278	2	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATATT	-59645155	True	NA	NA	False	AAAAAG	-2	NA	59657541	59651184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59652327_59657405
transcript_3225.known	chr1	+	1683	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	1.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843427	True	NA	NA	False	AGTAAA	-16	NA	42846625	42852477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42846658_42849290_42849414_42850949
transcript_32250.known	chr15	+	795	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	59768351	59769146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_59768400_59769100
transcript_32251.known	chr15	-	757	3	FSM	ENSG00000259223.2	ENST00000560503.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGATCTGTGCTATTTTG	-60118281	True	NA	NA	False	AATAAA	-19	NA	60118320	60073553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60074049_60074800_60074936_60118193
transcript_32252.known	chr15	-	1747	15	FSM	ENSG00000182718.18	ENST00000678870.1	1747	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	628.695641136213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397257_60397339_60397942
transcript_32253.known	chr15	-	1920	15	FSM	ENSG00000182718.18	ENST00000558169.6	1920	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	692.11629021695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387404	True	NA	NA	False	AATAAA	-22	NA	60397988	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354209_60355914_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397257_60397339_60397942
transcript_32254.known	chr15	-	1790	15	FSM	ENSG00000182718.18	ENST00000557906.6	1790	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	626.999564658248	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397257_60397339_60397942
transcript_32255.known	chr15	-	1676	14	FSM	ENSG00000182718.18	ENST00000396024.7	1676	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	571.435304905383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTTCGAATGCTCAG	-60387402	True	NA	NA	False	AATAAA	-32	NA	60397986	60347133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397942
transcript_32256.known	chr15	-	1989	14	FSM	ENSG00000182718.18	ENST00000678061.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	574.645380743174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393012_60393441_60397942
transcript_32257.known	chr15	-	1964	14	FSM	ENSG00000182718.18	ENST00000559780.6	1964	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	573.222624740853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393037_60393441_60397942
transcript_32258.known	chr15	-	1761	14	FSM	ENSG00000182718.18	ENST00000677968.1	1761	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	575.536826843647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387400	True	NA	NA	False	AATAAA	-22	NA	60397984	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393238_60393441_60397942
transcript_32259.known	chr15	-	1838	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	572.504835771933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
transcript_32260.known	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	509.824485403712	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	-60387402	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
transcript_32264.known	chr15	-	1444	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_12	440.248690767187	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTACTTTGTGGCCCTGC	-60387401	True	NA	-7	True	AATAAA	-21	NA	60397985	60347331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
transcript_32265.known	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_12	114.214314874372	1588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	-60387402	True	NA	NA	False	AATAAA	-15	NA	60397986	60347150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_32266.known	chr15	-	1542	13	FSM	ENSG00000182718.18	ENST00000559113.6	1542	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	626.456746755557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397257_60397339_60397942
transcript_32270.known	chr15	-	1445	12	FSM	ENSG00000182718.18	ENST00000558985.6	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	450.749733570692	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGTCGCTATTTA	-60387449	True	NA	NA	False	AAGAAA	-35	NA	60398033	60347206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397942
transcript_32275.known	chr15	-	908	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	72.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCGCAGTCATGGCCGT	-60387402	True	NA	NA	False	ATTAAA	-21	NA	60397986	60395644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60396428_60397257_60397339_60397942
transcript_32276.known	chr15	-	574	2	FSM	ENSG00000182718.18	ENST00000560546.5	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCACTCTGTTGCCAGGC	-60387402	True	NA	NA	False	NA	NA	NA	60397986	60385556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60386087_60397942
transcript_32278.known	chr15	-	7060	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_13	63.2304427383589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTACTGTTGCCATGT	-60473250	True	NA	-7	True	AATAAA	-19	NA	60479160	60419612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
transcript_32279.known	chr15	-	7206	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_13	43.6874759577108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	-60473232	True	NA	-3	True	AATAAA	-23	NA	60479142	60419608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_32288.known	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_6	56.9614727249919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	-60473163	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_3229.known	chr1	+	1577	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843410	True	NA	NA	False	AGTAAA	-16	NA	42846608	42852477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42846658_42850949
transcript_32301.nic	chr15	+	1136	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	301	junction_9	468.529404060338	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63007003	True	NA	20	True	AATAAA	-15	NA	63042742	63066093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_32302.known	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	527.138630535146	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63006892	True	NA	20	True	AATAAA	-15	NA	63042631	63066093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_32303.known	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	537.249327134221	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	63007007	True	NA	8	True	AATAAA	-24	NA	63042746	63066178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_32308.known	chr15	+	1100	10	FSM	ENSG00000140416.23	ENST00000561266.6	1100	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	633.889755574439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	63007037	False	NA	18	True	AATAAA	-13	NA	63042776	63066091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_3231.known	chr1	-	3384	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	0	0	0	multi-exon	TRUE	canonical	3	759	junction_7	95.8297100764337	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAGAAGTTTGCTTTT	-42913904	True	NA	4	True	AATAAA	-41	NA	42958868	42925352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_32318.nic	chr15	+	1056	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	457.204822809209	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGCTATTCTTT	63007003	True	NA	19	True	AATAAA	-14	NA	63042742	63066092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
transcript_32319.known	chr15	+	1717	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	187.662429644295	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	63006945	True	NA	-5	True	AATAAA	-1	NA	63042684	63071889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_32326.known	chr15	+	977	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	447.724454882688	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	63007018	True	NA	NA	False	NA	NA	NA	63042757	63071222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_32329.known	chr15	+	933	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	618.558354159088	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	63007030	False	NA	NA	False	NA	NA	NA	63042769	63071190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_32330.known	chr15	+	1670	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	652.228439658989	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	63007018	True	NA	21	True	AATAAA	-27	NA	63042757	63071915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_32337.known	chr15	+	941	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_8	576.205692439774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63048286	False	NA	20	True	AATAAA	-15	NA	63048575	63066093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_3234.known	chr1	-	2652	9	FSM	ENSG00000117394.24	ENST00000675112.1	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_6	101.032095766642	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTTAGAAACATGGTT	-42958653	False	NA	-23	True	TATAAA	-5	NA	42958674	42926168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_32351.known	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	377.917980519583	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	63045018	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_32356.known	chr15	+	1031	6	FSM	ENSG00000140416.23	ENST00000558314.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	536.952139394192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATAAGGTACTGATGGCT	63007011	True	NA	52	True	NA	NA	NA	63042750	63061265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63043705_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197
transcript_32358.known	chr15	+	3957	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	63006947	True	NA	34	True	AAAACA	-20	NA	63042686	63047726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026
transcript_32366.known	chr15	-	923	4	FSM	ENSG00000185088.14	ENST00000455271.5	923	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-63157271	False	NA	-7	True	AATAAA	-19	NA	63157281	63153852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786
transcript_32369.known	chr15	-	6110	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_3	90.292118519097	2922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTGGATTGGTAAAT	-63125910	True	NA	NA	False	AATAAA	-22	NA	63157477	63148248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
transcript_32370.known	chr15	-	528	4	FSM	ENSG00000185088.14	ENST00000411926.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAATCCCCTCTTTTTCT	-63158011	True	NA	-13	True	AATAAA	-13	NA	63158021	63153858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157915
transcript_32371.known	chr15	-	970	3	FSM	ENSG00000185088.14	ENST00000439025.1	970	3	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	59	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTTTACAAAATTTT	-63125932	True	NA	NA	False	TTTAAA	-18	NA	63157499	63154970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63155732_63156412_63156522_63157399
transcript_32372.known	chr15	-	693	5	FSM	ENSG00000185088.14	ENST00000635699.1	693	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2263.79316634714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-63125910	True	NA	-7	True	AATAAA	-19	NA	63157477	63153852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786_63156974_63157399
transcript_32373.known	chr15	+	774	9	FSM	ENSG00000166128.13	ENST00000558119.5	774	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	93.7456665665139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCACCCAGCCTCAGA	63184306	True	NA	NA	False	NA	NA	NA	63189593	63263679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63251283_63251343_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_32375.known	chr15	+	4800	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	25.5885816372085	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	63184318	True	NA	66	True	AATAAA	-23	NA	63189605	63267776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_3238.known	chr1	-	541	2	FSM	ENSG00000117394.24	ENST00000460369.3	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTTTTGACAGTTTGG	-42913895	True	NA	NA	False	AATAAA	-13	NA	42958859	42951615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42951931_42958633
transcript_32380.known	chr15	+	4138	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.4350251052598	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	63275136	True	NA	10	True	AATAAA	-22	NA	63277604	63309126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
transcript_32381.known	chr15	+	685	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	44.7325384926901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	63275141	True	NA	-88	True	NA	NA	NA	63277609	63305801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
transcript_32383.known	chr15	+	5499	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.9054624581929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	63504713	False	NA	19	True	ATTAAA	-23	NA	63504733	63594640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32384.known	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	45.4030835957207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	63502248	True	NA	6	True	AATAAA	-17	NA	63504634	63591444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32385.known	chr15	+	5517	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	21.1351337244651	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	63502206	True	NA	12	True	ATTAAA	-16	NA	63504592	63594633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32387.known	chr15	+	5474	14	FSM	ENSG00000140455.17	ENST00000540797.5	5474	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	43.3773861952988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	NA	False	NA	19	True	ATTAAA	-23	NA	63504510	63594640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63532646_63532708_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32388.nnic	chr15	+	2291	14	NIC	ENSG00000140455.17	novel	5517	15	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	43.8730012272513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCTTTGTTGGTTTT	63502205	True	NA	17	True	AATAAA	-40	NA	63504591	63591467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_63504831_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32389.known	chr15	-	508	3	FSM	ENSG00000259248.7	ENST00000560622.5	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACCTATAAAAATTGAATT	NA	False	NA	NA	False	AATAAA	-29	NA	63600739	63591070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63591336_63594694_63594787_63600588
transcript_32396.known	chr15	-	636	6	FSM	ENSG00000166797.11	ENST00000559705.1	636	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	579.35757525038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAACTTACGGGAAATT	-64081508	True	NA	NA	False	GATAAA	-33	NA	64093853	64072980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64090197_64090316_64093644
transcript_32398.known	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_2	98.9504295089213	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-64081493	True	NA	-28	True	AATAAA	-18	NA	64093838	64072564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
transcript_3240.known	chr1	+	1124	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAAGCTTTATTTT	42958633	True	NA	5	True	AATAAA	-17	NA	42959048	42983358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
transcript_32401.known	chr15	-	826	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	472.269932230381	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	-64081463	True	NA	-41	True	AATAAA	-5	NA	64093808	64072577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
transcript_32403.known	chr15	-	561	4	FSM	ENSG00000166797.11	ENST00000559950.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_1	80.4169689113491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGTTACTTTCAAAAAAG	-64081512	True	NA	NA	False	NA	NA	NA	64093857	64075404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64075538_64081101_64081152_64088686_64088852_64093644
transcript_32407.known	chr15	+	8214	15	FSM	ENSG00000028528.15	ENST00000559844.6	8214	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.250498737703	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	64087399	True	NA	10	True	AATAAA	-22	NA	64095981	64144231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_32408.known	chr15	+	3373	15	FSM	ENSG00000028528.15	ENST00000261889.9	3373	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.961935283029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCTCAGTTTGGATT	64087410	True	NA	NA	False	AATACA	-14	NA	64095992	64139875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64138041
transcript_32412.known	chr15	+	1374	13	FSM	ENSG00000028528.15	ENST00000561026.5	1374	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	119.561322016036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAAGGACCCCAGAGC	64087431	True	NA	NA	False	NA	NA	NA	64096013	64137618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64096173_64112572_64112685_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_32415.known	chr15	+	3600	7	FSM	ENSG00000157734.14	ENST00000325881.9	3600	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.07769755210323	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGCGTCTGTCCACGT	64150993	True	NA	22	True	AATAAA	-18	NA	64151730	64157481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64151851_64152242_64152327_64152637_64152743_64153244_64153340_64153651_64153685_64153934_64154003_64154386
transcript_32417.known	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_4	2071.0942759807	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-64092541	True	NA	NA	False	NA	NA	NA	64163026	64155739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
transcript_32419.known	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	4932	junction_4	148.211630785172	3525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-64092537	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
transcript_32420.known	chr15	-	2485	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.5790673817056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCTGGTTATATTGG	-64355059	True	NA	2	True	TTTAAA	-32	NA	64356071	64171133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_32423.known	chr15	-	8085	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6.59701911146427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGAAGAAGAAAATTAT	-64355161	True	NA	NA	False	AATAAA	-20	NA	64356173	64165524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_32427.known	chr15	-	690	4	FSM	ENSG00000166803.14	ENST00000560234.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	437.479396340242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGTAAGACTAATTAT	-64387584	True	NA	21	True	TTTAAA	-33	NA	64387684	64365867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64387446
transcript_32429.known	chr15	-	749	3	FSM	ENSG00000166803.14	ENST00000559519.5	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	491.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAGTATTAATTAAACA	-64370775	True	NA	-37	True	ATTAAA	-2	NA	64381441	64365605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64376742_64376906_64381325
transcript_3243.known	chr1	+	3075	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	0	4	0	multi-exon	FALSE	canonical	2	7	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	42958688	True	NA	NA	False	NA	NA	NA	42959103	42976428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42959578_42970248_42970395_42973973
transcript_32430.known	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	80.8125402809902	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-64370775	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
transcript_32432.nnic	chr15	+	1961	13	NIC	ENSG00000103671.10	novel	761	6	NA	NA	-36	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	37.7943080664565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	NA	False	NA	19	True	TATAAA	-21	NA	64387711	64455303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_64387789_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32434.nnic	chr15	+	2055	13	NNC	ENSG00000103671.10	novel	2013	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	38.379953534799	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	64385075	True	NA	19	True	TATAAA	-21	NA	64387760	64455303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414179_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32435.known	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_11	14.9840192649814	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	64385150	True	NA	19	True	TATAAA	-21	NA	64387835	64455303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32439.nnic	chr15	+	2082	13	NIC	ENSG00000103671.10	novel	2013	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	36.5182602725449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	64385165	True	NA	19	True	TATAAA	-21	NA	64387850	64455303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_64388049_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32442.nnic	chr15	+	1900	12	NIC	ENSG00000103671.10	novel	2013	13	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	39.2647298254357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTTTGACATTTTTC	64385157	True	NA	16	True	TATAAA	-18	NA	64387842	64455300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64454996
transcript_32451.nic	chr15	+	1686	10	ISM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	30973	0	0	5prime_fragment	FALSE	canonical	3	109	junction_2	14.2992704639946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAGTGCAAATAAAA	64385150	True	NA	NA	False	NA	NA	NA	64387835	64424330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030
transcript_32468.known	chr15	-	1934	6	FSM	ENSG00000180304.14	ENST00000326005.10	1934	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	1205.64329716546	3653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	-64679111	False	NA	-21	True	AATAAA	-18	NA	64703281	64687572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_32480.known	chr15	-	1744	5	FSM	ENSG00000180304.14	ENST00000560258.6	1744	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1546.73931223073	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	-64679038	True	NA	-52	True	NA	NA	NA	64703208	64687603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64688835_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_32483.known	chr15	-	785	4	FSM	ENSG00000180304.14	ENST00000559753.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	1327.74353279874	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTTTATGAACTGGCA	-64679031	True	NA	-42	True	AGTAAA	-3	NA	64703201	64688484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64703028
transcript_32489.known	chr15	-	707	3	FSM	ENSG00000180304.14	ENST00000560837.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_1	116.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATGCCTGCCGGTTAA	-64679024	True	NA	-1	True	ATTAAA	-20	NA	64703194	64690166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64690550_64691433_64691592_64703028
transcript_32492.nnic	chr15	-	1756	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	837	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_7	586.591538170353	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	-64774677	False	NA	-13	True	AATAAA	-15	NA	64774752	64739891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64774655
transcript_32493.known	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1490	junction_2	180.576853444731	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-64760463	True	NA	-12	True	AATAAA	-16	NA	64775589	64739890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
transcript_32494.nnic	chr15	-	1768	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	-943	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_7	596.600095096697	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	-64776457	False	NA	-13	True	AATAAA	-15	NA	64776532	64739891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64776423
transcript_32495.nnic	chr15	-	1662	7	NIC	ENSG00000166831.9	novel	2017	8	NA	NA	276	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	637.127254862707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	-64775238	False	15126	-13	True	AATAAA	-15	NA	64775313	64739891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64775232
transcript_325.known	chr1	-	878	2	FSM	ENSG00000188976.11	ENST00000469563.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1652	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCTGGC	-940507	True	NA	NA	False	AAAAAG	-20	NA	959256	958245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_959082_959214
transcript_32501.known	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	7.22218803410712	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	64840217	True	NA	26	True	AATAAA	-16	NA	64841914	64868002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_32504.known	chr15	-	520	1	FSM	ENSG00000274383.1	ENST00000619654.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCCTCACAGGACTGG	NA	False	NA	0	True	AAAACA	-27	NA	64951435	64950915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64950900_64951400
transcript_32505.known	chr15	+	1477	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	8.18290901819151	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	64911418	True	NA	6	True	AGTAAA	-24	NA	64911917	64932514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
transcript_32506.nic	chr15	-	1799	10	NIC	ENSG00000090487.11	novel	1799	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	344.263178110104	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-64979779	True	NA	-6	True	AATAAA	-12	NA	64989814	64963026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989168_64989274_64989664
transcript_32507.known	chr15	-	1613	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	294.525784100476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-64979439	False	10035	-6	True	AATAAA	-12	NA	64989474	64963026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
transcript_32508.known	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	73.827078365597	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-64979879	True	NA	-1	True	AATAAA	-17	NA	64989914	64963021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_32512.known	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	20.6424168885332	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-65026259	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_32517.nic	chr15	-	1082	7	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-47	3395	-24	-2977	5prime_fragment	FALSE	canonical	3	223	junction_5	19.9450634382434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTGTCTTATTCTTTGC	-65026283	True	NA	NA	False	NA	NA	NA	65029663	65005972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_32518.nic	chr15	-	1044	6	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-47	13677	-24	0	5prime_fragment	FALSE	canonical	3	223	junction_4	18.6697616481839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTATAGAGACCTTAGA	-65026283	True	NA	NA	False	TTTAAA	-1	NA	65029663	65016254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_32520.known	chr15	-	421	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCTTTCTGTAATAT	-65026152	False	NA	NA	False	TATAAA	-33	NA	65029532	65026747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65027041_65029404
transcript_32521.known	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	14.9164338901763	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-65133475	True	NA	-8	True	AATAAA	-19	NA	65133808	65117378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
transcript_32523.known	chr15	-	4695	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	31.171030398347	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	-65181101	True	NA	NA	False	AATAAA	-20	NA	65185342	65148218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_32531.nnic	chr15	+	974	3	Antisense	novelGene_ENSG00000103742.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGATTCCTAACTTCC	65415374	True	NA	1	True	ATTAAA	-17	NA	65415476	65419569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr15_+_65415851_65416848_65416957_65419077
transcript_32534.known	chr15	-	7281	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_4	9.98974543471532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	-65515412	True	NA	-3	True	AATAAA	-18	NA	65517689	65442466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_32537.nic	chr15	-	3000	19	NIC	ENSG00000074603.19	novel	3125	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	14.1509716980849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATTAGCACCATGT	-65515438	True	NA	NA	False	ACTAAA	-14	NA	65517715	65446620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65447007_65450998_65451111_65451959_65452103_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_32538.nic	chr15	-	758	4	NIC	ENSG00000074603.19	novel	561	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	-65515412	True	NA	4	True	AATAAA	-26	NA	65517689	65511960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65512109_65512294_65512565_65515655_65515792_65517485
transcript_32539.known	chr15	-	561	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	-65515351	True	NA	4	True	AATAAA	-26	NA	65517628	65511960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65512109_65512294_65512565_65517485
transcript_32542.known	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	490.633019679679	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	65513780	True	NA	20	True	ATTAAA	-17	NA	65530462	65578349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_32548.known	chr15	+	1658	11	FSM	ENSG00000074696.13	ENST00000566074.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	627.766708260322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACAACATCTATTATTA	65530726	False	NA	NA	False	GGGGCT	-33	NA	65530753	65576955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530834_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_32551.known	chr15	+	1332	10	FSM	ENSG00000074696.13	ENST00000442729.6	1332	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	657.119715871967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATCTCATGTTCAGTC	65513799	True	NA	-48	True	NA	NA	NA	65530481	65576637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_32561.known	chr15	+	393	2	FSM	ENSG00000074696.13	ENST00000566239.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	1784	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAGGAAAAAAAAAAAAA	65513905	False	NA	NA	False	TTTAAA	-35	NA	65530587	65551937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65551675
transcript_32562.known	chr15	+	1465	12	FSM	ENSG00000074696.13	ENST00000565299.5	1465	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	693.79514446221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTCCCCAGTAAC	65513807	True	NA	27	True	ATTAAA	-16	NA	65530489	65576499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65535720_65535835_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_32567.nic	chr15	-	2556	12	NIC	ENSG00000138614.16	novel	2615	12	NA	NA	0	-22	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	78.8225331712778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-65608223	True	NA	-8	True	AATAAA	-17	NA	65611123	65578781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610795
transcript_32568.nic	chr15	-	2386	12	NIC	ENSG00000138614.16	novel	2304	12	NA	NA	3	-22	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	76.912422021134	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	NA	False	NA	-8	True	AATAAA	-17	NA	65611255	65578781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65611097
transcript_32569.nic	chr15	-	2695	12	NIC	ENSG00000138614.16	novel	2615	12	NA	NA	1	-22	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	73.6506159046922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-65608235	True	NA	-8	True	AATAAA	-17	NA	65611135	65578781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610685
transcript_32570.known	chr15	-	2615	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	59.7605414470919	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-65608236	True	NA	21	True	ACTAAA	-5	NA	65611136	65578752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
transcript_32571.known	chr15	-	2393	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	25	-3	-22	multi-exon	FALSE	canonical	3	114	junction_11	51.5083239682338	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-65608345	True	NA	-8	True	AATAAA	-17	NA	65611245	65578781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_32574.known	chr15	-	1980	12	FSM	ENSG00000138614.16	ENST00000431261.6	1980	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	82.957023624254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTCACCTCTTCCCTC	NA	False	NA	NA	False	GGGGCT	-14	NA	65611258	65579064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607301_65607443_65611097
transcript_32576.known	chr15	-	1741	11	FSM	ENSG00000138614.16	ENST00000420799.7	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	83.7795321065951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTTGAATGACTGAT	-65608342	True	NA	NA	False	NA	NA	NA	65611242	65579146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
transcript_32583.known	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	74.7039992236025	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	65851072	True	NA	30	True	AATATA	-29	NA	65869490	65891989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_32586.known	chr15	+	635	5	FSM	ENSG00000103769.10	ENST00000567671.1	635	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	527.16049501077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCACTGAAAACAAGC	65869954	True	NA	NA	False	NA	NA	NA	65870012	65887791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65870086_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_32589.known	chr15	+	588	4	FSM	ENSG00000103769.10	ENST00000566233.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	604.331218970377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACGCGAAAATGACATG	65851045	True	NA	NA	False	NA	NA	NA	65869463	65887736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65887700
transcript_32595.known	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	11.5650335062204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	66289629	True	NA	23	True	AATAAA	-18	NA	66293567	66333898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_32597.known	chr15	+	2399	12	FSM	ENSG00000166938.13	ENST00000564909.5	2399	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	9.49728103761482	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTCCTTGGTTTTT	66289657	True	NA	NA	False	AAAACA	-16	NA	66293595	66326561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830
transcript_32599.nic	chr15	+	1329	8	ISM	ENSG00000166938.13	ENST00000565281.5	2305	12	64	7700	-3	3677	5prime_fragment	FALSE	canonical	3	181	junction_2	9.28021815366384	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAAGATACTGGGATGTG	66289626	True	NA	NA	False	AATAAA	-20	NA	66293564	66318751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448
transcript_32604.known	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	14.5377762665241	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	-66352306	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_32608.known	chr15	-	1459	7	FSM	ENSG00000075131.10	ENST00000566524.5	1459	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	68.2731442239349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCACCATGTTGGC	-66352306	True	NA	NA	False	NA	NA	NA	66356685	66336383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66352128_66352208_66352814_66352956_66356638
transcript_32611.nic	chr15	-	915	7	ISM	ENSG00000075131.10	ENST00000261881.9	1728	8	-69	4850	-69	-4060	5prime_fragment	FALSE	canonical	3	154	junction_6	15.5884572681199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATATTAAGTTTATGT	-66352375	True	NA	NA	False	AATAAA	-21	NA	66356754	66341040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_32614.known	chr15	-	729	2	FSM	ENSG00000075131.10	ENST00000561773.1	729	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGATGTAATAAAAGACC	-66386473	True	NA	NA	False	NA	NA	NA	66386707	66379269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66379941_66386649
transcript_32616.known	chr15	-	1069	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	175.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATAAATTTATAAGTA	-66497730	False	150775	-30	True	NA	NA	NA	66497759	66493843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66495329_66495420_66497489
transcript_32617.known	chr15	-	574	2	FSM	ENSG00000174446.13	ENST00000566658.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTAGCATTGAGTAATA	-66497709	False	150775	-92	True	NA	NA	NA	66497738	66494227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66497489
transcript_32618.known	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-66497733	False	150775	-66	True	TATAAA	-24	NA	66497762	66493879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66497641
transcript_32619.known	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-66497733	False	150775	NA	False	AGTAAA	-20	NA	66497762	66493467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66495329_66495420_66497641
transcript_32621.known	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	52.7546440527827	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	66501583	True	NA	7	True	AATAAA	-19	NA	66505325	66550130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_32623.known	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	100.247548536881	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	NA	False	NA	92	True	AATAAA	-24	NA	66505116	66549487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_32631.known	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	132.327971500823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	NA	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_32638.known	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	8.69691690407374	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	-66565685	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_32652.known	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_7	826.499550013694	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-66354080	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_32653.known	chr15	+	1147	7	FSM	ENSG00000166949.17	ENST00000537194.6	1147	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	34.2608458091092	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAAGAAATGGCGTCT	67166008	False	NA	NA	False	NA	NA	NA	67166018	67190762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67166194_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_32655.nnic	chr15	-	2188	11	NNC	ENSG00000103591.13	novel	3132	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	147.088714726861	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGTAATGCATATCA	-67250126	True	NA	-19	True	AATAAA	-20	NA	67254695	67201672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_67202899_67203547_67203598_67204043_67204149_67205018_67205047_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_3266.nnic	chr1	-	1178	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	433.521355220361	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172260_43193264
transcript_32660.known	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	112.289088989861	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-67250106	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
transcript_32661.known	chr15	-	3132	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	32.0061722442468	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTGGTTTTTGGTTGT	-67250092	True	NA	NA	False	TTTAAA	-5	NA	67254661	67200666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_32664.nnic	chr15	-	394	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	0	3466	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	9	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	-67521342	True	NA	-2	True	AATAAA	-18	NA	67521662	67514919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_67515067_67518999_67519103_67521518
transcript_32665.nnic	chr15	-	360	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	7	3466	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	8.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	-67521335	True	NA	-2	True	AATAAA	-18	NA	67521655	67514919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_67515067_67518999_67519103_67521545
transcript_32666.known	chr15	+	4193	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTGCAATGATTGAGG	67520181	True	NA	NA	False	AATAAA	-16	NA	67521130	67530146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67521595_67526417
transcript_32669.known	chr15	+	2344	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	8.48474688515901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67542686	False	NA	24	True	AATAAA	-21	NA	67542702	67807114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_3267.nnic	chr1	-	1199	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	433.521355220361	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172263_43193246
transcript_32670.known	chr15	+	1783	22	FSM	ENSG00000137764.20	ENST00000354498.9	1783	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9928715249851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTCTGCCATAAGAGT	67546991	False	NA	21	True	AATAAA	-18	NA	67548997	67807111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67549208_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_32672.nnic	chr15	+	1421	14	NNC	ENSG00000137764.20	novel	412	3	NA	NA	-3621	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	15.4414335416918	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67636909	True	NA	24	True	AATAAA	-21	NA	67636931	67807114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_67637227_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_32675.known	chr15	+	7980	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.547568485785	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAATCATCTATTAT	68049188	True	NA	NA	False	AATAAA	-39	NA	68054314	68193847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
transcript_3268.nnic	chr1	-	1184	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	433.521355220361	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172268_43193266
transcript_32681.known	chr15	-	2228	7	FSM	ENSG00000128973.13	ENST00000249806.11	2228	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.5715195861619	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTAGAGGTGTTTTT	-68220627	True	NA	-15	True	AGTAAA	-18	NA	68229728	68206991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
transcript_32682.known	chr15	-	3857	5	FSM	ENSG00000129007.16	ENST00000467889.3	3857	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	51.060625730596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATAGCTATTTTATCA	-68205298	False	NA	NA	False	ATTAAA	-20	NA	68205332	68190704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68194113_68197439_68197629_68199540_68199682_68205120_68205152_68205244
transcript_32683.known	chr15	-	2520	4	FSM	ENSG00000129007.16	ENST00000448060.7	2520	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	54.2176682969266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTCTATGTCTATA	-68205454	False	NA	-3	True	AATAAA	-18	NA	68205488	68192056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68194113_68197439_68197629_68205120_68205152_68205244
transcript_32684.known	chr15	-	3238	4	FSM	ENSG00000260007.3	ENST00000637054.1	3238	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	43.7137151119519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTATACAAACTGACAT	-68220576	True	NA	NA	False	AATAAA	-15	NA	68229677	68191354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68194113_68197439_68197629_68218535_68218651_68229501
transcript_32687.known	chr15	-	2440	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_4	227.622250425763	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGTTTACATATGGT	-68780431	True	NA	-11	True	TATAAA	-18	NA	68820895	68778534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
transcript_3269.nnic	chr1	-	1217	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	433.521355220361	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172282_43193247
transcript_32698.known	chr15	-	1084	7	FSM	ENSG00000140350.15	ENST00000267918.9	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1081.29280904336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTATTTCCCAAGTCT	-68777135	False	113	NA	False	NA	NA	NA	68817599	68779742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68817549
transcript_3270.nnic	chr1	-	1200	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	433.521355220361	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172282_43193264
transcript_3271.nnic	chr1	-	1226	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	TRUE	non_canonical	0	0	junction_9	433.521355220361	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172293_43193249
transcript_32714.known	chr15	+	1308	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	69159273	True	NA	2	True	AATAAA	-16	NA	69160583	69197458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69160758_69194435_69194526_69196414
transcript_32716.nnic	chr15	+	1206	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-40	-52	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	69159233	True	NA	8	True	AATAAA	-26	NA	69160543	69197406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69160758_69196414
transcript_32717.nnic	chr15	+	1259	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-40	1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAATATAATGATTTAA	69159233	True	NA	3	True	AATAAA	-17	NA	69160543	69197459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69160758_69196414
transcript_32718.known	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	4.03112887414927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	69159324	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
transcript_3272.nnic	chr1	-	1211	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	433.521355220361	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172293_43193264
transcript_32720.known	chr15	+	5372	9	FSM	ENSG00000137819.14	ENST00000395407.7	5372	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.37333318515884	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCACTGTCCTAGG	69297725	True	NA	NA	False	AGTAAA	-34	NA	69298911	69407780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69299057_69337340_69337502_69359965_69360132_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_32726.nic	chr15	+	3386	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	115.431180527692	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410050	True	NA	105	True	ATTAAA	-21	NA	69414310	69448425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_32727.known	chr15	+	3620	23	FSM	ENSG00000137807.16	ENST00000647715.1	3620	23	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_17	76.3948664494854	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	69410088	True	NA	107	True	ATTAAA	-23	NA	69414348	69448427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_32729.known	chr15	+	3351	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_17	63.8825452830171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410043	True	NA	105	True	ATTAAA	-21	NA	69414303	69448425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_3273.nnic	chr1	-	1236	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	433.521355220361	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172297_43193243
transcript_32740.known	chr15	+	445	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	10246	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	69276382	True	NA	33	True	AATAAA	-15	NA	69452813	69455547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69455169_69455288_69455427
transcript_32744.known	chr15	+	256	2	FSM	ENSG00000137818.12	ENST00000560274.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	69276452	True	NA	32	True	AATAAA	-14	NA	69452883	69455546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69455427
transcript_32745.known	chr15	+	1174	4	FSM	ENSG00000137818.12	ENST00000260379.11	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_3	1482.43365974858	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	69276386	True	NA	68	True	AATAAA	-31	NA	69452817	69456205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427
transcript_32746.known	chr15	+	1962	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_2	1403	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	69276387	True	NA	32	True	AATAAA	-14	NA	69452818	69455546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69453646_69455288_69455427
transcript_32747.known	chr15	-	1575	9	FSM	ENSG00000140332.18	ENST00000559191.5	1575	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	51.603657816089	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGGAGGCTTATGGC	-70093736	True	NA	-38	True	NA	NA	NA	70097866	70049835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057520_70097657
transcript_32748.known	chr15	-	6904	19	FSM	ENSG00000137831.15	ENST00000322954.11	6904	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	28.4602820492171	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAAATCTTTAATATT	-70760897	True	NA	NA	False	AATAAA	-22	NA	70763558	70654553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70682757_70682796_70684264_70684447_70687539_70687647_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
transcript_32749.known	chr15	+	6605	17	FSM	ENSG00000137821.12	ENST00000544974.6	6605	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.4791555258435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCATAGTGTACTTGCG	NA	False	NA	NA	False	AATAAA	-21	NA	70853238	71053657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70853470_70872907_70873224_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_3275.nnic	chr1	-	1224	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	433.521355220361	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172306_43193264
transcript_32750.known	chr15	+	3061	17	FSM	ENSG00000137821.12	ENST00000561081.5	3061	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.7696697936511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGTATGTTTGCCT	NA	False	NA	5	True	AATAAA	-19	NA	70892442	71050071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70898366_70898456_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_32751.known	chr15	+	6176	16	FSM	ENSG00000137821.12	ENST00000260382.10	6176	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	9.22942155404239	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATAGTGTACTTGCGG	70892172	True	NA	NA	False	AATAAA	-22	NA	70892825	71053658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_32753.known	chr15	+	2586	16	FSM	ENSG00000137821.12	ENST00000560369.5	2586	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	15.8478880471675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGATGGCGTGGCACTGC	70892609	False	NA	NA	False	ACTAAA	-8	NA	70892625	71049853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70892943_70893583_70893656_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_32757.known	chr15	-	4467	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTATGGGCCAGGCAT	-70851797	True	NA	NA	False	AATAAA	-17	NA	70854157	70829129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70833117_70836294_70836506_70853888
transcript_32758.known	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	-70851761	True	NA	3	True	AATAAA	-36	NA	70854121	70851426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70851721_70853888
transcript_32759.known	chr15	-	2047	3	FSM	ENSG00000129028.9	ENST00000249861.9	2047	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAGCCTGAACAATGA	-70891962	True	NA	-15	True	AATAAA	-18	NA	70892433	70881341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70882651_70882760_70882909_70891843
transcript_32760.known	chr15	-	555	1	FSM	ENSG00000212664.5	ENST00000498103.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	901	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	71341712	71341157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_71341200_71341700
transcript_32763.known	chr15	+	703	3	FSM	ENSG00000166192.15	ENST00000564082.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGCAGAGAAACTGGAGG	72117724	True	NA	NA	False	NA	NA	NA	72118324	72140015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72118465_72139311_72139436_72139576
transcript_32765.known	chr15	+	4178	2	FSM	ENSG00000166192.15	ENST00000340912.6	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTCCATCTCGTCTC	72117802	True	NA	NA	False	AATAAA	-17	NA	72118402	72143692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72118465_72139576
transcript_3277.nnic	chr1	-	1242	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	433.521355220361	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193283	43164345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172312_43193252
transcript_32784.known	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	1	2003	junction_4	2785.53535429009	5043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72176175	True	NA	-4	True	AATAAA	-17	NA	72231190	72199028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_32799.known	chr15	-	2279	10	FSM	ENSG00000067225.20	ENST00000389093.7	2279	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3926.28164496073	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72231374	False	NA	-4	True	AATAAA	-17	NA	72231386	72199028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209845_72217483_72217501_72218943_72219111_72231115
transcript_328.known	chr1	+	637	2	FSM	ENSG00000187608.10	ENST00000649529.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_1	0	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGCCTCTGTGTCTGTG	1009220	True	NA	6	True	AATAAA	-19	NA	1013496	1014540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1013577_1013983
transcript_32834.known	chr15	-	1892	15	FSM	ENSG00000213614.11	ENST00000683681.1	1892	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	92.1510793673706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGGCATTTTTCTA	-72374367	True	NA	-56	True	AATAAA	-2	NA	72376009	72343911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72345676_72345777_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_32838.known	chr15	-	4785	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_5	30.2543458661228	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTAGCCGAGCCACC	-72374372	True	NA	-13	True	AATAAA	-28	NA	72376014	72340923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_32839.known	chr15	-	1795	14	FSM	ENSG00000213614.11	ENST00000566304.5	1795	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	74.280533339066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCATTCAATAAAGAGTAAT	-72374351	True	NA	-70	True	NA	NA	NA	72375993	72343925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356651_72375719
transcript_32843.known	chr15	-	1743	13	FSM	ENSG00000213614.11	ENST00000567411.5	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	73.3637720919226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCATTTTTCTATAAT	-72374361	True	NA	-52	True	AATAAA	-6	NA	72376003	72343907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72355558_72355625_72356524_72356618_72375719
transcript_32847.known	chr15	-	1582	13	FSM	ENSG00000213614.11	ENST00000567159.5	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	31.4717686541799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGATCCAGGGCTGGGG	-72374351	True	NA	NA	False	NA	NA	NA	72375993	72345410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_32849.known	chr15	-	2075	12	FSM	ENSG00000213614.11	ENST00000684231.1	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	77.7347683786093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-72374350	True	NA	-20	True	TTTAAA	-10	NA	72375992	72343453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72375719
transcript_32854.known	chr15	-	3477	12	FSM	ENSG00000213614.11	ENST00000683853.1	3477	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	80.0261320955962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTGTTCTCTAGGCA	-72374361	True	NA	-19	True	ATTAAA	-1	NA	72376003	72343452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_32855.nnic	chr15	-	1253	11	NNC	ENSG00000213614.11	novel	4785	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	86.3064887479499	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGATTACCTGTGTTT	-72374355	True	NA	-31	True	AATAAA	-27	NA	72375997	72343886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348083_72353151_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_32864.nic	chr15	-	950	6	NIC	ENSG00000213614.11	novel	1987	12	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_3	112.380425341783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGATTACCTGTGTTT	NA	False	NA	-31	True	AATAAA	-27	NA	72376060	72343886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_72344141_72345445_72345551_72346234_72346326_72355558_72355625_72356524_72356618_72375719
transcript_32865.known	chr15	-	1000	2	FSM	ENSG00000213614.11	ENST00000567213.2	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGAGATGCCTTTCCT	-72374347	True	NA	NA	False	AATAAA	-23	NA	72375989	72369958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72370689_72375719
transcript_32866.known	chr15	+	21679	14	FSM	ENSG00000166233.15	ENST00000379887.9	21679	14	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_8	22.8827730350836	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCCCTTTTGTTGA	72466986	True	NA	NA	False	GATAAA	-6	NA	72474329	72602987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72475015_72518066_72518135_72544819_72544965_72555270_72555364_72555851_72555908_72561482_72561550_72563393_72563501_72566562_72566606_72567105_72567178_72570176_72570308_72572107_72572166_72580730_72580992_72582074_72582188_72583207
transcript_32868.nic	chr15	+	175	2	ISM	ENSG00000215186.7	ENST00000421285.4	5380	18	0	13038	0	-3610	5prime_fragment	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAAAAAGAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	72654696	72656561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_72654822_72656511
transcript_32869.known	chr15	+	1876	17	FSM	ENSG00000140463.14	ENST00000567279.5	1876	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	136.950022248081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACTGGCAGCAAGGCT	72682395	True	NA	NA	False	NA	NA	NA	72686206	72737824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72686252_72695176_72695229_72704423_72704482_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_32873.known	chr15	+	2467	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	33.623007995518	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	72682395	True	NA	12	True	AATAAA	-17	NA	72686206	72738473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_32875.known	chr15	+	1864	16	FSM	ENSG00000140463.14	ENST00000562084.5	1864	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	104.386376292865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAGAGAAATAAGAA	72682408	True	NA	NA	False	NA	NA	NA	72686219	72737570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72686565_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_32877.nic	chr15	+	2352	15	NIC	ENSG00000140463.14	novel	2467	16	NA	NA	-1	-68	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	107.112400433053	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTGGGGAAAATTGTT	72682373	True	NA	10	True	AATAAA	-16	NA	72686184	72738405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_32887.nnic	chr15	-	2084	9	NNC	ENSG00000156642.17	novel	2817	8	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	420.521402546886	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	-73633434	False	NA	-16	True	AATAAA	-17	NA	73633453	73560013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570260_73570311_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73633124
transcript_32889.known	chr15	-	2817	8	FSM	ENSG00000156642.17	ENST00000351217.10	2817	8	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_3	99.5030509223569	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	NA	False	NA	-16	True	AATAAA	-17	NA	73634134	73560013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73633124
transcript_32896.known	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	485.939255463067	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-73631972	True	NA	NA	False	NA	NA	NA	73633245	73560816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
transcript_32897.known	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	TRUE	canonical	3	582	junction_1	140.856901381035	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	73680244	True	NA	16	True	AATAAA	-15	NA	73684382	73714514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_32901.nnic	chr15	+	1342	4	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	73752166	True	NA	36	True	NA	NA	NA	73752325	73770489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_73752397_73767788_73767882_73768752_73768911_73769469
transcript_32907.nnic	chr15	+	1253	3	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	73752162	True	NA	36	True	NA	NA	NA	73752321	73770489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_73752397_73768752_73768911_73769469
transcript_32908.known	chr15	-	7150	3	FSM	ENSG00000205363.7	ENST00000569673.3	7150	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAGCCCCATTTGCAG	-73753253	True	NA	-33	True	AATAAA	-16	NA	73753351	73735457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73740643_73750974_73751698_73752109
transcript_32909.known	chr15	+	1224	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	73752157	True	NA	NA	False	ACTAAA	-16	NA	73752316	73770613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73752397_73769469
transcript_32911.known	chr15	+	2346	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	8.34665601703261	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	73925640	True	NA	6	True	AATAAA	-15	NA	73926461	73952136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_32913.known	chr15	-	1833	7	FSM	ENSG00000067221.14	ENST00000561656.5	1833	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	9.94428926011753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTTTACAATGTATA	NA	False	NA	NA	False	AATAAA	-1	NA	73994622	73983236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73994550
transcript_32914.known	chr15	-	6280	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	5.19615242270663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTCTTTGTTTGGACA	-73992064	True	NA	NA	False	AATAAA	-20	NA	73992295	73978925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_32916.known	chr15	-	1849	6	FSM	ENSG00000067221.14	ENST00000564777.5	1849	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.35948716543807	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-73992066	True	NA	NA	False	AATAAA	-32	NA	73992297	73983205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_32918.known	chr15	-	1891	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	7.19444229944198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	-73992281	False	NA	NA	False	AATAAA	-20	NA	73992348	73983217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_32919.nic	chr15	-	1719	6	NIC	ENSG00000067221.14	novel	1891	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	10.6845683113545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	NA	False	NA	NA	False	AATAAA	-20	NA	73994636	73983217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73994550
transcript_32920.known	chr15	+	2199	8	FSM	ENSG00000140464.20	ENST00000395135.7	2199	8	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_7	27.5355058357869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGCCTGAGTGTGCG	73992541	True	NA	3	True	AATAAA	-13	NA	73994672	74043337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988
transcript_32921.known	chr15	+	1985	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	35.485912697858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992612	True	NA	4	True	AATAAA	-14	NA	73994743	74043338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
transcript_32922.known	chr15	-	2139	3	FSM	ENSG00000248540.3	ENST00000668929.1	2139	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACTCTGTCTCAAAAAAA	-74129134	False	NA	NA	False	NA	NA	NA	74129146	74126385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74127734_74128015_74128625_74128964
transcript_32924.known	chr15	-	1260	2	FSM	ENSG00000248540.3	ENST00000659491.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTAGGGCCCAAGCCTG	-74129329	False	NA	NA	False	NA	NA	NA	74129341	74127741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74128625_74128964
transcript_32925.nnic	chr15	-	801	2	NNC	ENSG00000248540.3	novel	2566	2	NA	NA	46	-278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGGAAGTAGGG	-74129220	False	NA	2	True	ATTAAA	-16	NA	74129232	74128019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_74128625_74129036
transcript_32927.known	chr15	+	1346	5	FSM	ENSG00000140481.15	ENST00000560148.5	1346	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.96865172858795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	NA	False	NA	6	True	AATAAA	-18	NA	74202704	74221557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74218496_74218862_74221249
transcript_32928.known	chr15	+	589	4	FSM	ENSG00000140481.15	ENST00000558645.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.11805216802087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGTCCTTGTTCTGA	74202572	True	NA	NA	False	CATAAA	-21	NA	74203009	74213488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74213267
transcript_32929.nnic	chr15	+	944	4	NIC	ENSG00000140481.15	novel	1346	5	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	5.73488351136175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	74202537	True	NA	6	True	AATAAA	-18	NA	74202974	74221557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_74203099_74209387_74209535_74218496_74218862_74221249
transcript_32930.known	chr15	-	2565	19	FSM	ENSG00000137868.19	ENST00000563965.5	2565	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	24.7863089448815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGGTCCTCCGGATCA	-74202846	False	NA	NA	False	NA	NA	NA	74202858	74179974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202417
transcript_32931.known	chr15	-	2708	19	FSM	ENSG00000137868.19	ENST00000395105.9	2708	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	15.6115065193103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-74201877	True	NA	-5	True	AATAAA	-16	NA	74202787	74179465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_32932.known	chr15	-	2864	19	FSM	ENSG00000137868.19	ENST00000323940.9	2864	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	24.2441287279576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-74208838	True	NA	-5	True	AATAAA	-16	NA	74209030	74179465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_32936.nic	chr15	-	1847	6	NIC	ENSG00000137868.19	novel	1889	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_5	18.3019124683734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	-74201939	True	NA	NA	False	AATAAA	-20	NA	74202849	74194386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_32937.known	chr15	-	1889	6	FSM	ENSG00000137868.19	ENST00000432245.6	1889	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	43.1712867540452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	-74208786	True	NA	NA	False	AATAAA	-20	NA	74208978	74194386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_32941.known	chr15	-	612	2	FSM	ENSG00000277749.1	ENST00000611006.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTAAACTGCATGT	-74319612	True	NA	-16	True	AATAAA	-15	NA	74319688	74311515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74311959_74319519
transcript_32944.known	chr15	-	2001	9	FSM	ENSG00000140459.18	ENST00000358632.8	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	6.48074069840786	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCGTTCCATCAGAC	-74366193	False	NA	-12	True	AATAAA	-17	NA	74366206	74337758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365715
transcript_32945.known	chr15	+	915	4	FSM	ENSG00000260266.1	ENST00000564109.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGGTGGATGGCAA	74350653	True	NA	NA	False	AATACA	-33	NA	74350767	74361903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74350940_74354525_74354686_74356282_74356476_74361513
transcript_32953.known	chr15	-	1477	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	226.742654577736	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	-74453753	True	NA	-4	True	AATATA	-17	NA	74461118	74445977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
transcript_32954.nnic	chr15	-	1466	12	NIC	ENSG00000138629.16	novel	1477	12	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_11	227.149275562194	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453812	True	NA	-3	True	AATATA	-18	NA	74461177	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461107
transcript_32964.known	chr15	-	1720	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_10	168.281341805917	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453737	True	NA	-3	True	AATATA	-18	NA	74461102	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
transcript_32967.known	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_10	114.592495391278	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453795	True	NA	-3	True	AATATA	-18	NA	74461160	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_32968.known	chr15	-	1360	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	114.882766331596	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453817	True	NA	-3	True	AATATA	-18	NA	74461182	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_32969.nnic	chr15	-	1361	11	NNC	ENSG00000138629.16	novel	1360	11	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	177.745576597563	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	NA	False	NA	-3	True	AATATA	-18	NA	74461233	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461157
transcript_32984.nnic	chr15	-	1306	10	NIC	ENSG00000138629.16	novel	1409	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_1	202.633281850688	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453815	True	NA	-3	True	AATATA	-18	NA	74461180	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_32985.nnic	chr15	-	1255	10	NIC	ENSG00000138629.16	novel	1360	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_1	202.780730572108	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453835	False	NA	-3	True	AATATA	-18	NA	74461200	74445976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_33.known	ERCC-00081	+	517	1	FSM	ERCC-00081A	DQ854991	517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00081_+_0_500
transcript_330.known	chr1	+	1043	5	FSM	ENSG00000217801.11	ENST00000394517.7	1043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.38484800354236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCGGCACCTAGGT	1059458	True	NA	23	True	NA	NA	NA	1059707	1066459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1059783_1060276_1060394_1061019_1061118_1063078_1063202_1065829
transcript_3300.known	chr1	-	1352	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_6	62.2670659337663	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCTCATTTCCTTTGT	-43157459	True	NA	-7	True	GATAAA	-16	NA	43172290	43164183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
transcript_33007.known	chr15	+	1296	4	FSM	ENSG00000247240.9	ENST00000657781.2	1347	4	31	20	14	-5	multi-exon	FALSE	canonical	3	17	junction_1	19.258475767539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGTTTCCCTGTCA	74459833	True	NA	4	True	AATAAA	-13	NA	74461278	74481283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462028_74466035_74466131_74479059_74479279_74481050
transcript_33009.known	chr15	+	1333	4	FSM	ENSG00000247240.9	ENST00000499217.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	19.258475767539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCATTTTCATCCATTC	74459819	True	NA	23	True	AATAAA	-32	NA	74461264	74481302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462032_74466035_74466131_74479059_74479279_74481050
transcript_33011.known	chr15	+	1344	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	42	5	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.20144916122817	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	74459861	True	NA	9	True	AATAAA	-18	NA	74461306	74481288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
transcript_33013.nnic	chr15	+	1241	3	FSM	ENSG00000247240.9	ENST00000693152.1	1189	3	-58	6	0	0	multi-exon	FALSE	canonical	2	7	junction_1	18.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	NA	False	NA	9	True	AATAAA	-18	NA	74461247	74481288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462032_74479059_74479279_74481050
transcript_33015.known	chr15	+	1251	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	45	4	0	-1	multi-exon	FALSE	canonical	3	13	junction_1	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	74459861	True	NA	11	True	AATAAA	-20	NA	74461306	74481290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462099_74479059_74479279_74481050
transcript_33017.known	chr15	+	4228	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_7	94.8429623113913	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCTCTCAGTTGCT	74525248	True	NA	31	True	AATAAA	-20	NA	74541219	74598131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
transcript_33018.known	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_1	38.2784933814741	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	74611610	True	NA	19	True	AATAAA	-19	NA	74615835	74630201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_3302.known	chr1	-	1486	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACTCATTTTTATTT	-43284346	True	NA	-26	True	AATAAA	-30	NA	43285581	43281876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43283108_43283251_43283369_43285443
transcript_33020.nic	chr15	+	1765	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	75.3008779644847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	74611665	True	NA	15	True	AATAAA	-19	NA	74615890	74630116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_33028.known	chr15	-	3810	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	134.591743803251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGACTGACTGAGTC	-74689080	True	NA	-18	True	AATAAA	-1	NA	74695936	74630574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
transcript_3303.known	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-43284382	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43283108_43283251_43283369_43285552
transcript_33034.known	chr15	-	1825	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	119.282378054286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	-74689144	True	NA	-39	True	NA	NA	NA	74696000	74632541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
transcript_33035.nic	chr15	-	1875	8	NIC	ENSG00000179151.13	novel	2093	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	130.771025936519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTTTCTTCTGTGA	-74689168	True	NA	-6	True	NA	NA	NA	74696024	74632508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
transcript_33039.known	chr15	-	3744	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	47.2605073560955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-74689168	True	NA	-1	True	AATAAA	-18	NA	74696024	74630557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_33047.nic	chr15	-	1083	3	ISM	ENSG00000179151.13	ENST00000315127.9	3744	7	-14	40475	-9	512	5prime_fragment	FALSE	canonical	3	215	junction_2	58.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTAAATCCTGTTACT	-74689182	True	NA	NA	False	AAAAAG	-10	NA	74696038	74671032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_74671775_74674960_74675143_74695879
transcript_33048.known	chr15	+	958	1	FSM	ENSG00000179335.20	ENST00000568232.1	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	74629145	False	NA	17	True	AATAAA	-21	NA	74629160	74630118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74629200_74630100
transcript_3305.nnic	chr1	-	839	4	NNC	ENSG00000234694.2	novel	679	3	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.4142135623731	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	-43356968	False	1801	1	True	NA	NA	NA	43358769	43354683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43355007_43357802_43357901_43358041_43358109_43358418
transcript_33050.known	chr15	-	2674	17	FSM	ENSG00000140474.14	ENST00000647587.1	2674	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	70.2138474590305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTTCTCTATTTGCG	-74840894	True	NA	-17	True	NA	NA	NA	74843124	74836131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534_74842675_74843003
transcript_33052.known	chr15	-	2580	16	FSM	ENSG00000140474.14	ENST00000440863.7	2580	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_11	31.4851640547664	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840926	True	NA	-3	True	ATTAAA	-13	NA	74843156	74836117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_33058.known	chr15	-	2453	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	22.2145082097264	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	-74870971	True	NA	-5	True	AATAAA	-16	NA	74873365	74843729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_33059.known	chr15	-	858	9	FSM	ENSG00000140497.16	ENST00000569904.5	858	9	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_3	146.330479993062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGACGGACAGGGGCCAG	-74870908	True	NA	NA	False	NA	NA	NA	74873302	74845205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74845218_74845472_74845594_74848599_74848646_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_3306.known	chr1	-	661	3	FSM	ENSG00000234694.2	ENST00000424948.2	679	3	18	0	18	0	multi-exon	FALSE	canonical	1	1	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	-43356857	False	NA	1	True	NA	NA	NA	43358658	43354683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43355007_43357802_43357901_43358418
transcript_33063.known	chr15	+	5793	8	FSM	ENSG00000178802.18	ENST00000352410.9	5793	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	31.0154668459701	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	74885720	True	NA	3	True	AATAAA	-14	NA	74890041	74902219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_33066.known	chr15	+	2809	7	FSM	ENSG00000178802.18	ENST00000566377.5	2809	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	58.9170792064765	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCTAAAGGGAACCCA	74885717	True	NA	6	True	AATAAA	-19	NA	74890038	74899441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
transcript_33067.known	chr15	+	1619	7	FSM	ENSG00000178802.18	ENST00000323744.10	1619	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	66.7599347579736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	74885720	True	NA	15	True	ATTAAA	-17	NA	74890041	74898228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74896151_74896326_74897010_74897220_74897511
transcript_33068.known	chr15	+	1523	7	FSM	ENSG00000178802.18	ENST00000535694.5	1523	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	57.9417811255401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCAGGTAATTTCTA	74885720	True	NA	NA	False	NA	NA	NA	74890041	74898077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_33072.known	chr15	-	865	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.2521125205576	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	-74902914	True	NA	-11	True	AATAAA	-14	NA	74906793	74899991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_33074.known	chr15	+	1481	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	30.2892720282281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	74885720	True	NA	NA	False	AATACA	-39	NA	74890041	74896930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_33080.known	chr15	+	1148	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	33.8045854877707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	74885740	True	NA	8	True	NA	NA	NA	74890061	74893786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
transcript_33086.known	chr15	+	1052	6	FSM	ENSG00000178802.18	ENST00000562606.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	73.5543336588674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTACTCTGATTT	74885731	True	NA	NA	False	NA	NA	NA	74890052	74896538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890552_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_33088.known	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_1	125.680895525135	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	-74896930	True	NA	33	True	ATTAAA	-18	NA	74938073	74919790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
transcript_33089.known	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	1784.79024600154	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896937	True	NA	-5	True	AATAAA	-24	NA	74938080	74920274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
transcript_33090.nnic	chr15	-	538	4	NIC	ENSG00000178741.12	novel	1173	5	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	387	junction_2	1794.50742235547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896901	True	NA	-5	True	AATAAA	-24	NA	74938044	74920274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74920443_74923647_74923771_74929115_74929233_74937914
transcript_33091.known	chr15	-	571	4	FSM	ENSG00000178741.12	ENST00000568783.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	2017.40146392994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTAGGTATTTGTTTC	-74896940	True	NA	-10	True	AATAAA	-19	NA	74938083	74920279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74920443_74926765_74926888_74929115_74929233_74937914
transcript_33092.known	chr15	-	582	5	FSM	ENSG00000178741.12	ENST00000568517.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1809.41634236015	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACTTTAATAAAAGGGAA	-74937733	False	NA	-42	True	NA	NA	NA	74937776	74920311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937687
transcript_33093.known	chr15	+	1206	6	FSM	ENSG00000198794.12	ENST00000562765.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	34.5519898124551	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGGTGGGTACAGGCC	74990553	True	NA	NA	False	NA	NA	NA	74995572	75019489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75017869_75017972_75018417_75018536_75018788
transcript_33094.known	chr15	+	2215	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	70.612746724653	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	75020539	True	NA	10	True	AATAAA	-18	NA	75023589	75050726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_33096.known	chr15	+	926	5	FSM	ENSG00000138621.12	ENST00000568649.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	94.7918772891433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGTCCTGGCTGAG	75020554	True	NA	NA	False	NA	NA	NA	75023604	75049581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75048552_75048722_75049149
transcript_33099.known	chr15	+	464	5	FSM	ENSG00000138621.12	ENST00000569562.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	77.3252061102976	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAGTGAAAGAAGTC	75020539	True	NA	NA	False	NA	NA	NA	75023589	75049182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_33100.known	chr15	+	1127	4	FSM	ENSG00000138621.12	ENST00000568207.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	54.5221667458903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGGTGTGATTTCT	75020535	True	NA	NA	False	NA	NA	NA	75023585	75045168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385
transcript_33102.known	chr15	+	757	4	FSM	ENSG00000138621.12	ENST00000564923.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	101.161037734671	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGTTGTCCTCAC	75020536	True	NA	NA	False	NA	NA	NA	75023586	75049490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75048552_75048722_75049149
transcript_33107.nnic	chr15	+	830	3	NIC	ENSG00000138621.12	novel	926	5	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	120	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAGACTCCATTCTTT	75020504	True	NA	9	True	AATAAA	-13	NA	75023554	75049738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75023627_75048552_75048722_75049149
transcript_33113.known	chr15	+	895	8	FSM	ENSG00000140365.16	ENST00000267935.13	895	8	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	177.035797141109	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327201	True	NA	15	True	AATAAA	-17	NA	75336062	75340273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33115.nic	chr15	+	1005	8	NIC	ENSG00000140365.16	novel	895	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	261.28848705863	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327220	True	NA	15	True	AATAAA	-17	NA	75336081	75340273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75336222_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33117.nnic	chr15	+	1012	8	NIC	ENSG00000140365.16	novel	895	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	242.284282340782	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327222	True	NA	15	True	AATAAA	-17	NA	75336083	75340273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75336231_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33121.known	chr15	+	722	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	302.505096375802	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327197	True	NA	15	True	AATAAA	-17	NA	75336058	75340273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_33129.known	chr15	+	639	7	FSM	ENSG00000140365.16	ENST00000564815.5	639	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	306.281143541173	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGAGGCAGCCCTGGTT	75327191	True	NA	NA	False	NA	NA	NA	75336052	75340073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_3313.known	chr1	+	1649	11	FSM	ENSG00000117399.14	ENST00000310955.11	1649	11	0	0	0	0	multi-exon	TRUE	canonical	3	1559	junction_1	274.030381527304	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	43346072	True	NA	63	True	AATAAA	-32	NA	43358980	43363203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43359007_43359166_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_33135.nic	chr15	+	954	7	NIC	ENSG00000140365.16	novel	895	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	284.195746312682	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327208	True	NA	15	True	AATAAA	-17	NA	75336069	75340273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33141.known	chr15	+	677	6	FSM	ENSG00000140365.16	ENST00000567195.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	314.598410676214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTGCAGGGGGTTCT	75327158	True	NA	12	True	AATAAA	-14	NA	75336019	75340270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339964
transcript_33150.known	chr15	+	746	6	FSM	ENSG00000140365.16	ENST00000562789.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	373.500950467332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	75327237	True	NA	13	True	AATAAA	-15	NA	75336098	75340271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_33154.known	chr15	+	536	5	FSM	ENSG00000140365.16	ENST00000565517.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	342.802694709362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCAGAAGCACTTGCG	75327201	True	NA	NA	False	NA	NA	NA	75336062	75339307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338139_75338354_75338421_75338645_75338686_75338984
transcript_33159.known	chr15	+	926	4	FSM	ENSG00000140365.16	ENST00000567023.5	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	210.042852770572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCATGGAGAGTCCAG	75327198	True	NA	NA	False	NA	NA	NA	75336059	75339400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645
transcript_33162.known	chr15	+	2284	2	FSM	ENSG00000140365.16	ENST00000566843.1	2284	2	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327159	True	NA	15	True	AATAAA	-17	NA	75336020	75340273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061
transcript_33163.known	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	1	83	junction_2	32.1711920823584	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365408	True	NA	0	True	AATAAA	-16	NA	75368607	75355791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_33164.known	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_20	50.4325291850409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	-75449190	False	2500	-9	True	ATTAAA	-14	NA	75451690	75369378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_33165.nic	chr15	+	1784	10	NIC	ENSG00000140398.14	novel	1797	10	NA	NA	5	0	intron_retention	FALSE	canonical	1	3	junction_1	12.8793067829708	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	75347289	True	NA	15	True	AATAAA	-15	NA	75347623	75355247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75348000_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_33166.known	chr15	+	1797	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.3087843770011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	75347303	True	NA	15	True	AATAAA	-15	NA	75347637	75355247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_33178.known	chr15	-	4078	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	51.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATTGTCATGATATTT	-75449164	False	2500	NA	False	ATTAAA	-20	NA	75451664	75419209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75422824_75430186_75430409_75451422
transcript_33183.known	chr15	+	1430	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGTAAAACTTACTC	75367981	True	NA	NA	False	AATAAA	-23	NA	75368154	75369584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75368200_75369600
transcript_33184.known	chr15	-	984	1	FSM	ENSG00000276744.1	ENST00000617588.1	984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGTCTCACTGTGTG	-75451447	False	NA	-2	True	AATAAA	-24	NA	75453947	75452963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75453000_75453900
transcript_33185.known	chr15	-	5050	21	FSM	ENSG00000169375.16	ENST00000360439.8	5050	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	72.0558117017635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-75453283	True	NA	41	True	AATAAA	-23	NA	75455783	75370932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455634
transcript_33190.known	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	157.182444909266	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-75622493	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
transcript_33193.known	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	110.929031366906	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	-75622392	True	NA	NA	False	NA	NA	NA	75625693	75598121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
transcript_33194.known	chr15	-	1420	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_8	72.3911898990478	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-75622424	True	NA	NA	False	AATATA	-17	NA	75625725	75598085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_33202.known	chr15	-	1132	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAATCTGTCTGGTTT	-75628161	True	NA	-8	True	AATAAA	-26	NA	75640224	75639092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75639100_75640200
transcript_33203.nnic	chr15	-	755	2	FSM	ENSG00000246877.2	ENST00000689581.1	763	2	2	6	2	-6	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATAGTAATGATTGGT	-75738274	True	NA	NA	False	ATTAAA	-17	NA	75738627	75734789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75735304_75738386
transcript_33214.known	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.921910149673	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75942511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_33218.known	chr15	+	1486	6	FSM	ENSG00000167196.14	ENST00000453211.6	1486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	275.737846513677	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGGAGCCATTACTT	75892089	True	NA	NA	False	GATAAA	-15	NA	75903877	75930655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883
transcript_33223.known	chr15	+	725	6	FSM	ENSG00000167196.14	ENST00000565036.5	725	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	339.298924254115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCGATGCAGCGCCTCA	75892193	True	NA	NA	False	NA	NA	NA	75903981	75932798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75929883_75930050_75932684
transcript_33225.known	chr15	+	2164	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	259.577040587183	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75934107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_33251.known	chr15	-	2289	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_11	92.6840362657583	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCATTTCAGTCTTC	-76303855	True	NA	0	True	TATAAA	-19	NA	76311469	76215352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_33254.known	chr15	-	1346	11	FSM	ENSG00000140374.17	ENST00000433983.6	1346	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	220.114152202897	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAAAAGCACGGCTAT	-76303790	True	NA	NA	False	NA	NA	NA	76311404	76216083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76311349
transcript_33255.known	chr15	-	917	11	FSM	ENSG00000140374.17	ENST00000688389.1	2477	11	334	1226	-4	-24	multi-exon	FALSE	canonical	3	20	junction_4	270.660839428241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAGATATTGAAGAAAAA	-76303782	True	NA	NA	False	NA	NA	NA	76311396	76216582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_33260.known	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	285.56376987753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	-76303852	True	NA	-85	True	NA	NA	NA	76311466	76216467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
transcript_33264.known	chr15	-	792	9	FSM	ENSG00000140374.17	ENST00000559602.5	792	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	304.506747667437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATTGGAAAGCATGGA	-76303800	True	NA	-100	True	NA	NA	NA	76311414	76216482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76311349
transcript_33274.known	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.62936879248872	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	77028252	True	NA	-8	True	NA	NA	NA	77028342	77037313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_33276.known	chr15	-	6348	7	FSM	ENSG00000140391.15	ENST00000267970.9	6348	7	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_5	56.2069588416081	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-77060515	True	NA	NA	False	NA	NA	NA	77071109	77041403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77070891
transcript_33278.known	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	373.404048362271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	-77060528	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
transcript_33283.nnic	chr15	-	2319	4	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9234278833282	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	-77418039	True	NA	-5	True	AATAAA	-25	NA	77420186	77108157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_77110151_77286422_77286505_77365162_77365226_77420005
transcript_33284.nnic	chr15	-	2256	3	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	-77418039	True	NA	-5	True	AATAAA	-25	NA	77420186	77108157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_77110151_77286422_77286505_77420005
transcript_33288.known	chr15	+	3805	10	FSM	ENSG00000140382.15	ENST00000336216.9	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_9	36.8443506231214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	77418667	True	NA	19	True	ATTAAA	-17	NA	77420887	77485603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_33290.nic	chr15	+	1659	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-205	5999	9	0	5prime_fragment	FALSE	canonical	3	376	junction_3	25.8215026673507	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	77420665	False	NA	7	True	AATAAA	-16	NA	77420682	77479604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_33292.known	chr15	-	3477	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGACTGTTCTCATTAT	-77631663	True	NA	NA	False	NA	NA	NA	77632912	77613026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77615901_77632309
transcript_33294.known	chr15	-	6126	13	FSM	ENSG00000167202.12	ENST00000300584.8	6126	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	9.0011573329952	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAAATTCAGTT	-78077107	True	NA	-5	True	AATAAA	-19	NA	78077711	77994984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77998356_78001618_78001741_78003304_78003491_78008996_78009115_78012822_78013318_78016545_78016740_78017846_78017958_78024155_78024540_78025258_78025498_78030006_78030171_78044899_78045069_78054033_78054188_78077292
transcript_33296.known	chr15	+	2110	12	FSM	ENSG00000166411.14	ENST00000560667.5	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	114.726768476057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTCCAAGAGCTTTTA	78145276	True	NA	NA	False	NA	NA	NA	78149359	78169715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_33299.nnic	chr15	+	1690	11	NIC	ENSG00000166411.14	novel	4083	11	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	93.6907679550125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTACAGAAATTACTGAG	78145262	True	NA	NA	False	AATAGA	-12	NA	78149345	78169560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_78149431_78155212_78155252_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_333.known	chr1	+	977	4	FSM	ENSG00000217801.11	ENST00000427998.6	982	4	5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	1059484	True	NA	20	True	NA	NA	NA	1059733	1066456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1059847_1060279_1060394_1063078_1063202_1065829
transcript_33300.nnic	chr15	+	2672	11	NIC	ENSG00000166411.14	novel	4083	11	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	93.6907679550125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTGCTTTCTCTACCT	78145262	True	NA	19	True	AATAAA	-16	NA	78149345	78170542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_78149431_78155212_78155252_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_33301.known	chr15	+	4083	11	FSM	ENSG00000166411.14	ENST00000299518.7	4083	11	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	13.6853936735485	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTAGGTTTCTGTCTTG	78145278	True	NA	NA	False	AATAAA	-21	NA	78149361	78171945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_33310.known	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	96.0362431585076	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-78129919	True	NA	28	True	NA	NA	NA	78131445	78104605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
transcript_33319.known	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_10	80.8609299971253	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290070	True	NA	-4	True	CATAAA	-17	NA	78299609	78283234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_33320.known	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	247.425059361416	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290066	True	NA	-4	True	CATAAA	-17	NA	78299605	78283234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
transcript_3333.known	chr1	+	1777	10	FSM	ENSG00000117399.14	ENST00000372462.1	1777	10	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_6	162.067506130038	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	43346104	False	NA	63	True	AATAAA	-32	NA	43359012	43363203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_33333.known	chr15	-	884	9	FSM	ENSG00000140395.9	ENST00000558459.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_6	271.709604863354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTCTTAATGCAA	-78290052	True	NA	-25	True	NA	NA	NA	78299591	78283255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78294945_78294974_78295674_78295726_78299561
transcript_33338.known	chr15	+	2961	8	FSM	ENSG00000140403.13	ENST00000343789.7	2961	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.8476155176669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	78264172	True	NA	18	True	ATTAAA	-23	NA	78264561	78282196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_33341.known	chr15	+	1320	8	FSM	ENSG00000140403.13	ENST00000483802.6	1320	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.6479117730496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTAGTCTGCATATG	78264172	True	NA	4	True	TATAAA	-1	NA	78264561	78280668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275610_78275729_78280044_78280146_78280244
transcript_33345.known	chr15	+	738	4	FSM	ENSG00000166426.8	ENST00000299529.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	2941	junction_3	68.425141578224	2875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCCCTTTTTTGGTTT	78298293	True	NA	30	True	ATTAAA	-20	NA	78340352	78348225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78340499_78341042_78341222_78343498_78343613_78347926
transcript_33347.known	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.1497792901604	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	78430033	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_3335.nic	chr1	-	1621	9	NIC	ENSG00000066322.15	novel	1466	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	84.3333230401838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-43366221	True	NA	-5	True	ATTAAA	-18	NA	43368022	43363400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43366267_43366412_43367914
transcript_33358.known	chr15	+	847	5	FSM	ENSG00000188266.14	ENST00000408962.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	78507028	True	NA	NA	False	AATAAA	-20	NA	78507563	78537372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379_78527564_78537299
transcript_33363.known	chr15	+	4378	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	0	0	0	0	multi-exon	FALSE	canonical	3	3132	junction_8	190.823052852636	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTACTCCTGTGTATAA	78513843	True	NA	NA	False	AATAAA	-14	NA	78540443	78552417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33364.known	chr15	+	944	9	FSM	ENSG00000041357.16	ENST00000560217.5	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	1114.62605837115	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTGGGAAAATAGGACA	78513804	True	NA	NA	False	NA	NA	NA	78540404	78549037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542575_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33366.known	chr15	+	1094	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	1130.7164142149	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	78513820	True	NA	10	True	AATAAA	-11	NA	78540420	78549186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33369.known	chr15	+	786	9	FSM	ENSG00000041357.16	ENST00000559365.5	786	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1173.50042607576	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGTAATCAGAGTTC	78514134	False	NA	NA	False	NA	NA	NA	78540734	78548820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540836_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_3337.known	chr1	-	973	8	FSM	ENSG00000066322.15	ENST00000497050.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	65.9532920686593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTATGGCACCATC	-43365937	False	NA	NA	False	NA	NA	NA	43367738	43364049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
transcript_33370.known	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	1226.35940399016	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	78513877	True	NA	NA	False	GATAAA	-30	NA	78540477	78548970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
transcript_33372.known	chr15	+	1019	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	1240.39233424636	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	78513826	True	NA	-19	True	AATAAA	-29	NA	78540426	78549204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_3338.known	chr1	-	1466	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	11.141025490483	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-43366210	True	NA	-5	True	ATTAAA	-18	NA	43368011	43363400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_33384.known	chr15	+	2359	13	FSM	ENSG00000185787.15	ENST00000331268.9	2359	13	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	2900.7599040309	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAACGTTTCTCCCCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	78872813	78898133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78884966_78885084_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_3339.known	chr1	-	1034	8	FSM	ENSG00000066322.15	ENST00000464204.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.8173851594107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTTTGGTTCCTCACC	-43366206	True	NA	NA	False	NA	NA	NA	43368007	43363755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364614_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_33393.known	chr15	+	2172	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	0	0	0	0	multi-exon	FALSE	canonical	3	6640	junction_6	618.320211781501	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	78771901	True	NA	NA	False	ATTAAA	-26	NA	78872889	78898139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_334.nnic	chr1	+	755	3	FSM	ENSG00000217801.11	ENST00000692821.1	722	3	-28	-5	-15	5	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATGGATAATTGTTCA	1059422	True	NA	16	True	ATTAAA	-26	NA	1059671	1066356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1059783_1060276_1060394_1065829
transcript_3340.known	chr1	-	828	7	FSM	ENSG00000066322.15	ENST00000487209.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	64.6675257674893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGACCAAGGCTT	-43366198	True	NA	NA	False	NA	NA	NA	43367999	43363835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367914
transcript_33401.known	chr15	+	1468	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	2290.27369615638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	78772016	True	NA	NA	False	NA	NA	NA	78873004	78897389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_33420.known	chr15	+	855	10	FSM	ENSG00000185787.15	ENST00000558502.5	855	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2497.69870871292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACTTATGTTTGGATC	78772041	False	NA	NA	False	NA	NA	NA	78873029	78897077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_33432.known	chr15	+	448	5	FSM	ENSG00000185787.15	ENST00000559619.5	448	5	0	0	0	0	multi-exon	FALSE	canonical	3	7509	junction_3	297.362993662628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTGGAACCAGTAA	78771998	True	NA	NA	False	NA	NA	NA	78872986	78887443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268
transcript_33435.known	chr15	-	2145	12	FSM	ENSG00000103811.18	ENST00000220166.10	2145	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	8.55222169192126	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGTAACATAAGACCAC	-78944002	True	NA	NA	False	AATATA	-19	NA	78945046	78921057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_33436.known	chr15	-	1198	11	FSM	ENSG00000103811.18	ENST00000677789.1	1198	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.2114478806494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACATGGACCACGAAT	-78943974	True	NA	-150	True	NA	NA	NA	78945018	78921889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_33437.known	chr15	-	1136	11	FSM	ENSG00000103811.18	ENST00000676850.1	1136	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.9727851870792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTAAAGTCTGCCAG	-78944036	True	NA	NA	False	AATAAA	-21	NA	78945080	78923753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78923985_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_3344.known	chr1	-	867	6	FSM	ENSG00000066322.15	ENST00000470968.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81.832511876393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTACAGGGACCACGG	-43366224	True	NA	NA	False	NA	NA	NA	43368025	43363770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_33440.known	chr15	-	1386	12	FSM	ENSG00000103811.18	ENST00000525807.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	24.9485420829778	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCATGCTGGTCCTG	-78943961	True	NA	-31	True	AATAAA	-22	NA	78945005	78921770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_33441.known	chr15	+	1483	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	203.892673292157	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	79303844	True	NA	13	True	AATAAA	-15	NA	79311158	79322837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
transcript_33442.known	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	1.5	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	79303797	True	NA	16	True	AATAAA	-18	NA	79311111	79322840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_79311418_79313756_79314006_79321977
transcript_33447.known	chr15	-	859	4	FSM	ENSG00000259332.3	ENST00000479961.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	328.75928377259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATAATCAGTGTTTTA	-79918704	True	NA	NA	False	NA	NA	NA	79923744	79845194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923451
transcript_33453.nic	chr15	-	996	3	NIC	ENSG00000136371.11	novel	948	3	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	283.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	-79891519	True	NA	-1	True	ATTAAA	-34	NA	79897057	79844975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_33454.known	chr15	-	2301	3	FSM	ENSG00000136371.11	ENST00000258874.4	2301	3	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_2	107.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTGAATATGGGTTTG	-79891476	True	NA	NA	False	AGTAAA	-16	NA	79897014	79843546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79896871
transcript_33455.known	chr15	-	948	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	NA	False	NA	-1	True	ATTAAA	-34	NA	79897379	79844975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79897160
transcript_33456.known	chr15	-	632	3	FSM	ENSG00000259332.3	ENST00000494999.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	399	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTACTATGATGCCT	-79918714	True	NA	NA	False	NA	NA	NA	79923754	79845375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79923451
transcript_33458.nic	chr15	-	932	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	-43	-64	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	283.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGTGTGAATAGTAGAA	-79891519	True	NA	-65	True	TATAAA	-19	NA	79897057	79845039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_33467.nnic	chr15	-	666	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	-79918720	True	NA	-4	True	AATAAA	-22	NA	79923760	79898839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_79899126_79907628_79907685_79923436
transcript_33468.known	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	92.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-79918662	True	NA	-16	True	AATAAA	-23	NA	79923702	79898903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79899126_79907628_79907685_79923451
transcript_3347.known	chr1	-	1483	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	76.9542668321482	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-43386466	True	NA	-11	True	AATAAA	-15	NA	43389808	43383916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_33471.nnic	chr15	-	770	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	223	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	NA	False	NA	-4	True	AATAAA	-22	NA	79923857	79898839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_33478.nnic	chr15	-	605	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	223	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-79918716	True	NA	-16	True	AATAAA	-23	NA	79923756	79898903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_33487.known	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	774.08715056295	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	80045732	True	NA	27	True	AATAAA	-27	NA	80059675	80138393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33491.known	chr15	+	1559	7	FSM	ENSG00000086666.19	ENST00000559157.5	1559	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	978.245822321204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80059496	False	NA	-6	True	NA	NA	NA	80059634	80138360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80059810_80115026_80115071_80120327_80120499_80121747_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33493.known	chr15	+	1602	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	862.740095406619	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	80071968	True	NA	-8	True	NA	NA	NA	80072582	80138358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33496.known	chr15	+	1446	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	806.330602172583	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80071963	True	NA	-6	True	NA	NA	NA	80072577	80138360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33499.known	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	245.000734692776	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80045770	True	NA	-6	True	NA	NA	NA	80059713	80138360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33501.known	chr15	+	1471	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	37.4798585365309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	80152554	True	NA	22	True	AATAAA	-26	NA	80152793	80186343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_33502.known	chr15	+	2152	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	35.0458154944848	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGCATGTCCAGTGT	80152540	True	NA	NA	False	AATACA	-18	NA	80152779	80186946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_33507.known	chr15	+	1456	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	12.2879649592696	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	80152253	True	NA	28	True	AATAAA	-32	NA	80152998	80186349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_33509.nic	chr15	+	1574	13	NIC	ENSG00000103876.14	novel	1456	14	NA	NA	1	0	intron_retention	FALSE	canonical	2	9	junction_7	40.8189600553468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	80152541	True	NA	28	True	AATAAA	-32	NA	80152780	80186349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_33515.known	chr15	+	2124	5	FSM	ENSG00000103876.14	ENST00000558767.6	2124	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	4.06201920231798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAATGCTCACTTTCAT	80152554	True	NA	22	True	ATTAAA	-19	NA	80152793	80163744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245
transcript_33516.known	chr15	+	2361	3	FSM	ENSG00000136379.12	ENST00000258884.5	2361	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGCTTGTGCAGTTT	80694426	True	NA	30	True	AATAAA	-18	NA	80695309	80755621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80696020_80749512_80749693_80754150
transcript_33517.known	chr15	-	2938	5	FSM	ENSG00000117899.11	ENST00000561312.5	2938	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	449.797176514037	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGTCAACAAATATAG	-80980277	True	NA	NA	False	AATAAA	-17	NA	80989828	80947328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_80948899_80951958_80952297_80978930_80979478_80981949_80982183_80989578
transcript_3352.known	chr1	-	1968	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	35.512517354996	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-43386458	True	NA	-11	True	AATAAA	-15	NA	43389800	43383916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_33522.known	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	37	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	-80980268	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_80979478_80981949_80982183_80989578
transcript_33526.known	chr15	-	4887	6	FSM	ENSG00000172345.14	ENST00000302824.7	4887	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	11.0381157812373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCATTAAGCTCTCTT	-81323731	True	NA	-4	True	AATAAA	-25	NA	81324141	81309052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81322898_81322949_81324000
transcript_33529.nic	chr15	-	1484	5	NIC	ENSG00000172345.14	novel	1264	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	8.61684396980704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCAATGTGTCTTCCA	-81323794	True	NA	-7	True	TTTAAA	-25	NA	81324204	81312667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81323801
transcript_33530.nic	chr15	-	1381	5	NIC	ENSG00000172345.14	novel	1264	5	NA	NA	-21	-103	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	8.61684396980704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTATATGGCTTTAA	-81323794	True	NA	-18	True	AATATA	-14	NA	81324204	81312770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81323801
transcript_33531.known	chr15	-	1264	5	FSM	ENSG00000172345.14	ENST00000325346.6	1264	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	11.4318633651737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCAATGTGTCTTCCA	-81323773	True	NA	-7	True	TTTAAA	-25	NA	81324183	81312667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81324000
transcript_33533.nic	chr15	+	924	4	FSM	ENSG00000259343.8	ENST00000687585.1	836	4	-88	0	23	0	multi-exon	FALSE	canonical	3	10	junction_3	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	81324077	True	NA	NA	False	AATAAA	-25	NA	81324399	81343150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81342732
transcript_33543.nnic	chr15	-	744	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-353	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	9.93310961716756	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	-81798408	False	NA	NA	False	AAAAAG	-25	NA	81798423	81660374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660711_81661999_81662139_81797923_81798045_81798275
transcript_33544.nnic	chr15	-	975	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-357	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAGAAAAAGAAAA	-81798412	False	NA	NA	False	AAAAAG	-21	NA	81798427	81660378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660628_81706499_81706583_81707869_81708009_81797923
transcript_33553.known	chr15	-	3643	20	FSM	ENSG00000140598.15	ENST00000268206.12	3643	20	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_11	26.4542672332394	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGTTAGAGAACATGT	-82258474	True	NA	-13	True	AATAAA	-25	NA	82262734	82130232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_33556.known	chr15	-	3470	18	FSM	ENSG00000140598.15	ENST00000359445.7	3470	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	53.1303808591865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGTTAGAGAACATGT	-82258454	True	NA	-13	True	AATAAA	-25	NA	82262714	82130232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82261687_82261798_82262613
transcript_33558.nnic	chr15	-	1139	5	NNC	ENSG00000140598.15	novel	521	3	NA	NA	-7	9887	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	101.259567449205	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTACATGTGGTTCAT	-82258481	True	NA	NA	False	AATAAA	-21	NA	82262741	82251800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_82252549_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_33560.known	chr15	+	445	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	82262526	True	NA	0	True	AATAAA	-11	NA	82262826	82264881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
transcript_33561.known	chr15	+	404	3	FSM	ENSG00000188659.10	ENST00000566861.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	82262525	True	NA	8	True	AATAAA	-19	NA	82262825	82264889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82262933_82263358_82263439_82264672
transcript_33563.known	chr15	+	551	2	FSM	ENSG00000188659.10	ENST00000569120.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATTTAGTAACTATT	82262517	True	NA	NA	False	AAGAAA	-44	NA	82262817	82265748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82263189_82265568
transcript_33564.known	chr15	+	340	2	FSM	ENSG00000188659.10	ENST00000566205.1	340	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	82262509	True	NA	8	True	AATAAA	-19	NA	82262809	82264889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82262933_82264672
transcript_33566.known	chr15	-	636	2	FSM	ENSG00000237550.6	ENST00000418824.3	636	2	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTCAAGCACAATAT	NA	False	NA	-4	True	AATAAA	-33	NA	82372912	82372195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82372417_82372497
transcript_33567.known	chr15	-	579	1	FSM	ENSG00000237550.6	ENST00000466501.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGAGTTACCTGGCT	NA	False	NA	NA	False	AAAAAG	-27	NA	82372888	82372309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82372300_82372900
transcript_33569.known	chr15	-	1349	7	FSM	ENSG00000255769.7	ENST00000618004.4	1349	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.3699434640926	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCCTGTCCAGCGGCCT	NA	False	NA	NA	False	NA	NA	NA	82513950	82472992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477480_82477583_82477837_82477927_82513665
transcript_33572.known	chr15	-	583	6	FSM	ENSG00000182774.13	ENST00000558397.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	6365.81570578351	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGCCTGTGTCATCTT	-82433654	True	NA	-16	True	AATAAA	-12	NA	82540437	82536755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82536882_82537921_82538043_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_33582.known	chr15	-	488	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_4	1855.80636112715	37558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCATCTTTGCAGT	-82433674	True	NA	-10	True	AATAAA	-18	NA	82540457	82536749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_33585.known	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	2126.36878791573	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-82433676	True	NA	-15	True	AATAAA	-13	NA	82540459	82536754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
transcript_33589.known	chr15	-	932	4	FSM	ENSG00000182774.13	ENST00000560639.1	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	1911.97390730685	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGAATTTTTTCTGTA	-82433669	True	NA	-27	True	NA	NA	NA	82540452	82536808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82536882_82538305_82538986_82539980_82540133_82540425
transcript_33594.known	chr15	-	522	5	FSM	ENSG00000182774.13	ENST00000561068.5	522	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6786.42411362567	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTTGCCTGTGTCAT	-82540120	False	NA	-19	True	AATAAA	-9	NA	82540131	82536758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539299_82539376_82539980
transcript_33599.known	chr15	+	674	5	FSM	ENSG00000250988.7	ENST00000559366.1	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	24.6715929765388	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749806	True	NA	NA	False	AATAAA	-19	NA	82750583	82757206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903_82756940_82757045
transcript_3360.known	chr1	-	1186	7	FSM	ENSG00000159479.17	ENST00000372455.4	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	98.5573718985828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCCCACCACCC	-43386442	True	NA	-13	True	AATAAA	-15	NA	43389784	43384725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387630_43388309_43388490_43389758
transcript_33602.nnic	chr15	+	783	5	NNC	ENSG00000250988.7	novel	790	4	NA	NA	0	-123	intron_retention	FALSE	canonical	1	4	junction_2	28.5438259523842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTCTTTATGCTGAA	82749794	True	NA	NA	False	AATAAA	-18	NA	82750571	82757081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_82750849_82752438_82752555_82754628_82754785_82756729_82756786_82756903
transcript_33604.known	chr15	+	790	4	FSM	ENSG00000250988.7	ENST00000561107.5	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	9.56846672960488	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	82749794	True	NA	NA	False	AATAAA	-17	NA	82750571	82757204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903
transcript_33608.nic	chr15	+	541	4	NIC	ENSG00000250988.7	novel	790	4	NA	NA	0	-123	intron_retention	FALSE	canonical	3	23	junction_1	18.4571575998762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTCTTTATGCTGAA	82749786	True	NA	NA	False	AATAAA	-18	NA	82750563	82757081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_82750715_82754628_82754785_82756729_82756786_82756903
transcript_33609.nic	chr15	+	664	4	NIC	ENSG00000250988.7	novel	790	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_1	18.4571575998762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	82749786	True	NA	NA	False	AATAAA	-17	NA	82750563	82757204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_82750715_82754628_82754785_82756729_82756786_82756903
transcript_33611.known	chr15	+	725	3	FSM	ENSG00000250988.7	ENST00000558174.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	33.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749805	True	NA	NA	False	AATAAA	-19	NA	82750582	82757206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628_82754785_82756903
transcript_33614.nic	chr15	-	1177	4	ISM	ENSG00000103942.13	ENST00000450735.7	1949	9	98013	0	-1924	0	3prime_fragment	FALSE	canonical	3	87	junction_1	9.46337971105226	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-82854692	True	NA	-11	True	AATAAA	-17	NA	82854707	82848982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643
transcript_33621.known	chr15	-	518	5	FSM	ENSG00000169609.14	ENST00000451195.7	518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.5978351628036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTGACTCATCTATA	-83008554	True	NA	NA	False	AAAAAG	-11	NA	83011607	82990618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82990656_82991931_82992047_83008547_83008676_83010236_83010364_83011496
transcript_33624.known	chr15	+	1565	4	FSM	ENSG00000169612.4	ENST00000304191.4	1565	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_2	18.4028983224563	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCAGTTAGCCCATT	82979282	True	NA	37	True	AATAAA	-34	NA	82986209	82991057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82986370_82987335_82987385_82989009_82989189_82989880
transcript_3363.known	chr1	-	2173	6	FSM	ENSG00000178922.18	ENST00000372427.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.95315042645489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTCATATGTCTCTG	-43453899	False	375	-10	True	ATTAAA	-13	NA	43453909	43451159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204
transcript_3364.known	chr1	+	1601	5	FSM	ENSG00000198198.17	ENST00000357658.4	1601	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	4.02336923485777	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAATCTAAGACCTC	43388874	True	NA	NA	False	NA	NA	NA	43389950	43410577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43389996_43403176_43403303_43403600_43403775_43404379_43404551_43409492
transcript_33640.known	chr15	-	11274	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.2646761734941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTATATAATTTTTCA	-83008586	True	NA	-9	True	AATAAA	-20	NA	83011639	82994816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
transcript_33641.known	chr15	-	631	4	FSM	ENSG00000169609.14	ENST00000508990.2	631	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.8265404802613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATCATGACTTGTA	-83008532	True	NA	NA	False	AAAAAG	-3	NA	83011585	83004685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011496
transcript_33642.known	chr15	-	419	4	FSM	ENSG00000169609.14	ENST00000563387.5	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	67.2772043282286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCACAACGGTTCTG	-83008490	True	NA	-12	True	ATTAAA	-5	NA	83011543	83004866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011485
transcript_3365.known	chr1	-	796	8	FSM	ENSG00000178922.18	ENST00000372433.5	796	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	14.7648230602334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	-43453706	False	NA	-4	True	ATTAAA	-19	NA	43453716	43451153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453412_43453498_43453594
transcript_3366.known	chr1	+	545	2	FSM	ENSG00000229348.1	ENST00000444386.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATGCATTACTGCCAT	43453912	False	NA	NA	False	AATAAA	-16	NA	43453926	43456995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43454054_43456577
transcript_33661.known	chr15	+	1885	10	FSM	ENSG00000136404.16	ENST00000322019.14	1885	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	3.15445990368409	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	83107558	True	NA	NA	False	ATTAAA	-30	NA	83107644	83137408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
transcript_33662.known	chr15	-	934	7	FSM	ENSG00000166503.9	ENST00000563790.5	934	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	237.424139931521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTCCTCTCTGTTGTG	-83203940	True	NA	NA	False	NA	NA	NA	83207541	83139131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83192251_83192309_83207330
transcript_33665.known	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_5	38.7422250264489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	-83207223	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
transcript_33679.nic	chr15	-	653	4	ISM	ENSG00000166503.9	ENST00000299633.7	12538	6	279	29598	-3	0	5prime_fragment	FALSE	canonical	3	449	junction_3	19.6864307469779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATGTGTTTATTGGG	-83203943	True	NA	-3	True	ATTAAA	-14	NA	83207544	83157350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_83157574_83157902_83158042_83163998_83164076_83207330
transcript_33682.known	chr15	+	1693	9	FSM	ENSG00000140600.17	ENST00000427482.7	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	8.55496931613434	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGGTTATTTTTAATG	83445611	True	NA	22	True	AATAAA	-24	NA	83447340	83618743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568528_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
transcript_33684.known	chr15	+	496	3	FSM	ENSG00000259511.3	ENST00000637853.1	496	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTACCTGGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-31	NA	84172492	84182234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84172586_84174007_84174158_84181981
transcript_3369.known	chr1	+	4486	22	FSM	ENSG00000066135.13	ENST00000372396.4	4486	22	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	38.993283915005	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	43645952	True	NA	11	True	AATAAA	-18	NA	43650148	43705518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43650253_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_33694.nic	chr15	-	1687	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	36.2696067665477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	-84650833	True	NA	-35	True	AATAAA	-15	NA	84654316	84643081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_33695.nic	chr15	-	1682	9	NIC	ENSG00000177082.13	novel	5331	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	34.9622564346182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	-84654308	False	NA	-35	True	AATAAA	-15	NA	84654318	84643081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_33698.nic	chr15	-	1624	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	36.2696067665477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTGTGAATTTTTTT	-84650833	True	NA	-11	True	TATAAA	-1	NA	84654316	84643144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_337.known	chr1	-	2010	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	19.3465759244369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115104	True	NA	-11	True	TATAAA	-16	NA	1116095	1081822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_33700.known	chr15	-	1915	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	28.0597031127471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	-84654333	False	NA	NA	False	NA	NA	NA	84654343	84642767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_33701.known	chr15	-	5331	8	FSM	ENSG00000177082.13	ENST00000434634.7	5331	8	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_7	25.4990996239603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCATCTCCCTAAAATG	-84650800	True	NA	-5	True	AATAAA	-20	NA	84654283	84639284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_3371.known	chr1	-	686	5	FSM	ENSG00000236200.7	ENST00000439057.6	948	5	30	232	24	-83	multi-exon	FALSE	canonical	2	4	junction_1	4.43705983732471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATGTCTACTAAAAATAC	-43707097	False	NA	NA	False	NA	NA	NA	43707341	43699922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43700064_43702655_43702729_43703563_43703648_43704352_43704458_43707058
transcript_33712.known	chr15	-	1007	6	FSM	ENSG00000177082.13	ENST00000561329.5	1007	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	25.0519460321948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGGAGAGAGATGGTG	-84650791	True	NA	NA	False	NA	NA	NA	84654274	84645693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_33719.nnic	chr15	+	1127	4	NNC	ENSG00000176371.14	novel	906	3	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	60.1719757583766	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	84596789	True	NA	16	True	AATAAA	-17	NA	84600997	84616610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_84601136_84603819_84604334_84614654_84614828_84616308
transcript_3372.known	chr1	-	416	2	FSM	ENSG00000236200.7	ENST00000418149.2	466	2	41	9	35	-9	multi-exon	FALSE	canonical	2	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATAACTCGTTGCCGTT	-43707086	False	NA	NA	False	AATATA	-19	NA	43707330	43704313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43704458_43707058
transcript_33724.known	chr15	+	8975	4	FSM	ENSG00000176700.21	ENST00000348993.9	8975	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAGTCTACTA	84631071	True	NA	2	True	ATTAAA	-15	NA	84631450	84647478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84632299_84637346_84637421_84638395_84638478_84639507
transcript_33726.known	chr15	+	993	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	53.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596809	True	NA	15	True	AATAAA	-25	NA	84601017	84606889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604334_84606528
transcript_33727.known	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	19.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596841	True	NA	20	True	AATAAA	-21	NA	84601049	84616614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604334_84616308
transcript_33728.known	chr15	+	3756	3	FSM	ENSG00000176371.14	ENST00000546148.6	3756	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596800	True	NA	16	True	AATAAA	-17	NA	84601008	84623716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604334_84620601
transcript_33729.nnic	chr15	+	888	3	NIC	ENSG00000176371.14	novel	3756	3	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	70	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596789	True	NA	16	True	AATAAA	-17	NA	84600997	84623716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_84601136_84603819_84604334_84623480
transcript_33730.nic	chr15	+	1059	3	NIC	ENSG00000176371.14	novel	993	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	23.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596796	True	NA	15	True	AATAAA	-25	NA	84601004	84606889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_84601189_84603819_84604334_84606528
transcript_33731.nic	chr15	+	1004	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	10.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596796	True	NA	20	True	AATAAA	-21	NA	84601004	84616614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_84601189_84603819_84604334_84616308
transcript_33733.known	chr15	-	2140	7	FSM	ENSG00000177082.13	ENST00000559015.5	2140	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	26.9118932815958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGATTTCTGCTCCT	-84650797	True	NA	-8	True	AATAAA	-42	NA	84654280	84643054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84648626_84652713_84652803_84653631_84653700_84654233
transcript_33734.known	chr15	+	910	4	FSM	ENSG00000176371.14	ENST00000485222.2	910	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	49.0328687945364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	84603001	True	NA	17	True	AATAAA	-18	NA	84603900	84623717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84604334_84620601_84620773_84622645_84622715_84623480
transcript_33735.known	chr15	-	1017	3	FSM	ENSG00000197696.10	ENST00000394588.3	1017	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	84	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTCCTCTCCTTTCA	NA	False	NA	2	True	AATAAA	-21	NA	84658563	84655128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84655405_84657175_84657349_84657995
transcript_33736.known	chr15	-	655	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTGGTCCTCTCCTT	-84656634	True	NA	-1	True	AATAAA	-18	NA	84658199	84655131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84655410_84657175_84657349_84657995
transcript_3374.known	chr1	+	3883	20	FSM	ENSG00000117408.11	ENST00000372343.8	3883	20	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_14	17.6046141017953	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATACATTTATTTA	43945290	True	NA	23	True	ATTAAA	-17	NA	43946949	43968022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
transcript_33744.known	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	521.95362182222	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	-84693833	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
transcript_33761.known	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_5	54.6721135497797	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693809	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_33762.known	chr15	-	1256	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	485.525166700965	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-84715641	False	NA	-6	True	AATAAA	-24	NA	84716460	84669537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
transcript_33763.known	chr15	-	971	5	FSM	ENSG00000140612.14	ENST00000558134.5	971	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	484.643876985978	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693759	True	NA	-12	True	AATAAA	-18	NA	84716089	84669543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_33764.known	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	526.254928718012	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693781	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_33765.known	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	480.768330383772	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	-84693733	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
transcript_33766.known	chr15	+	1966	3	FSM	ENSG00000259527.2	ENST00000560153.2	1966	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTGACGATCACGTC	87576834	True	NA	NA	False	AATAAA	-14	NA	87576928	87579866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_87577048_87577709_87577765_87578074
transcript_33775.nic	chr15	+	1116	6	NIC	ENSG00000181991.16	novel	2002	6	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_1	69.2774133466312	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	88467443	True	NA	16	True	AATAAA	-18	NA	88467467	88478263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_88467783_88467910_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_33778.known	chr15	-	2315	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.3150211575089	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTGGTTGGATGA	-88545926	True	NA	NA	False	AATAAA	-21	NA	88546653	88512482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
transcript_33786.known	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.9765453086705	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545954	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
transcript_33788.known	chr15	-	986	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	28.6472802664872	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTCAGCTGATTTG	-88462323	True	NA	-10	True	AATAAA	-15	NA	88467388	88459477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
transcript_33795.known	chr15	+	453	2	FSM	ENSG00000181991.16	ENST00000559125.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTGAATGTGAGAT	88462443	True	NA	85	True	AGTAAA	-23	NA	88467677	88468258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467910
transcript_33796.known	chr15	-	1002	2	FSM	ENSG00000259494.2	ENST00000558531.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCGAGGTGTAATTTGG	-88462325	True	NA	NA	False	NA	NA	NA	88467390	88465012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88465774_88467149
transcript_33797.known	chr15	+	766	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	103.151284529084	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	88462483	True	NA	12	True	AATAAA	-14	NA	88467717	88478259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
transcript_33798.known	chr15	+	458	3	FSM	ENSG00000181991.16	ENST00000560850.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	104.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	88462473	True	NA	35	True	AATAAA	-14	NA	88467707	88472620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88468025_88472354
transcript_33799.known	chr15	+	2002	6	FSM	ENSG00000181991.16	ENST00000559323.5	2002	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	96.6175967409664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	88462471	True	NA	16	True	AATAAA	-18	NA	88467705	88478263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88469146_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_33801.nnic	chr15	+	1329	5	Fusion	ENSG00000172183.16_ENSG00000181026.15	novel	3072	4	NA	NA	-41	0	multi-exon	TRUE	canonical	2	4	junction_3	331.629593824194	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGTCCTCTTCTTAT	88610836	True	NA	33	True	AGTAAA	-26	NA	88621295	88655650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr15_+_88621383_88626145_88626750_88629225_88629427_88652109_88652311_88655414
transcript_33802.known	chr15	+	3072	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	41.0636362518253	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610880	True	NA	25	True	AATAAA	-18	NA	88621339	88632281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
transcript_33803.nnic	chr15	+	1128	4	Fusion	ENSG00000172183.16_ENSG00000181026.15	novel	3072	4	NA	NA	-41	0	multi-exon	FALSE	canonical	2	9	junction_2	287.225811282111	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGTCCTCTTCTTAT	88610836	True	NA	33	True	AGTAAA	-26	NA	88621295	88655650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr15_+_88621383_88626145_88626750_88652109_88652311_88655414
transcript_33805.known	chr15	+	1242	2	FSM	ENSG00000181026.15	ENST00000557787.1	1242	2	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGGGCTTAAGGGGAAA	88610877	True	NA	NA	False	CATAAA	-2	NA	88621336	88627341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88621383_88626145
transcript_33806.known	chr15	+	1583	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.84321537348893	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAATTTTTTTTTTT	88638910	True	NA	NA	False	AATAAA	-17	NA	88639015	88656483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
transcript_33808.known	chr15	-	1892	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	21.016362672927	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-88893867	True	NA	-9	True	AATAAA	-25	NA	88895544	88877293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
transcript_3381.known	chr1	+	987	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1545	junction_7	70.2444710584806	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	43966143	True	NA	8	True	AATAAA	-21	NA	43974959	43978295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_33810.nnic	chr15	-	2532	8	NNC	ENSG00000140545.15	novel	1936	8	NA	NA	161	0	intron_retention	FALSE	canonical	2	16	junction_7	342.801245443407	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-88913113	False	16822	-5	True	AATATA	-20	NA	88913156	88898682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912427
transcript_33811.known	chr15	-	1936	8	FSM	ENSG00000140545.15	ENST00000268150.13	1936	8	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_3	48.0616101202086	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-88896557	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_33812.known	chr15	-	1752	7	FSM	ENSG00000140545.15	ENST00000268151.11	1752	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	336.038894904874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-88896559	True	NA	-35	True	NA	NA	NA	88913381	88898712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88899533_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_33813.known	chr15	-	2464	1	FSM	ENSG00000140545.15	ENST00000617199.1	2464	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATAGTGACTGTGCCAT	-88904603	False	NA	NA	False	AATAAA	-20	NA	88904646	88902182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88902200_88904600
transcript_33814.known	chr15	+	8424	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	5.76541412215983	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	89086248	True	NA	11	True	AATAAA	-14	NA	89088455	89202355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
transcript_33817.known	chr15	-	1638	9	FSM	ENSG00000140522.12	ENST00000268125.10	1638	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTCAAATGATTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	89221579	89209868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89210444_89210698_89210810_89211742_89211902_89215059_89215239_89217119_89217325_89218564_89218694_89218963_89219076_89219736_89219860_89221534
transcript_33820.known	chr15	+	4733	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_1	75.7324401004262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	89236513	True	NA	19	True	AATAAA	-16	NA	89243978	89317131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_33836.nic	chr15	+	1087	10	ISM	ENSG00000140525.19	ENST00000674831.1	4239	39	9	47840	5	0	5prime_fragment	FALSE	canonical	3	226	junction_1	106.385857223994	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236488	True	NA	8	True	AATAAA	-14	NA	89243953	89268631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_33837.nic	chr15	+	1088	10	NIC	ENSG00000140525.19	novel	4503	39	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	142.077791246317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236498	True	NA	8	True	AATAAA	-14	NA	89243963	89268631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244045_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_33838.nic	chr15	+	1110	10	NIC	ENSG00000140525.19	novel	3690	36	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	114.598278486628	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236499	True	NA	8	True	AATAAA	-14	NA	89243964	89268631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_33840.nic	chr15	+	898	9	ISM	ENSG00000140525.19	ENST00000674831.1	4239	39	9	51820	5	0	5prime_fragment	FALSE	canonical	3	226	junction_1	112.584135205632	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTGTGTATTTTA	89236488	True	NA	8	True	AATAAA	-20	NA	89243953	89264651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521
transcript_33842.nic	chr15	+	921	9	NIC	ENSG00000140525.19	novel	1070	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	121.380342312913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTGTGTATTTTA	89236499	True	NA	8	True	AATAAA	-20	NA	89243964	89264651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521
transcript_33843.nnic	chr15	+	653	8	NNC	ENSG00000140525.19	novel	3690	36	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	209.108798944278	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236488	True	NA	22	True	AATAAA	-22	NA	89243953	89316481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260752_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_33846.nnic	chr15	+	676	8	NNC	ENSG00000140525.19	novel	3690	36	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	213.318483751887	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236499	True	NA	22	True	AATAAA	-22	NA	89243964	89316481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260752_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_33853.known	chr15	+	1109	1	FSM	ENSG00000261441.1	ENST00000569473.1	1109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTTTTTTTT	89335026	True	NA	NA	False	AATACA	-17	NA	89335052	89336161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89335100_89336200
transcript_33854.known	chr15	-	1952	11	FSM	ENSG00000140519.14	ENST00000268122.9	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.26885775404495	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGAATGCTCCAATGG	-89496567	True	NA	NA	False	AATAAA	-24	NA	89496583	89471406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89471856_89472710_89472864_89476754_89476829_89477081_89477207_89477516_89477654_89477836_89477975_89479321_89479489_89480260_89480409_89483066_89483218_89486798_89486986_89496360
transcript_33855.nic	chr15	-	2269	2	ISM	ENSG00000166813.16	ENST00000445906.1	1375	5	-3	2239	-3	-2239	5prime_fragment	FALSE	canonical	3	34	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	-89653781	True	NA	NA	False	NA	NA	NA	89655454	89650741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_89652955_89655398
transcript_33856.known	chr15	-	2708	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTGTCTGTGAGTG	-89690513	True	NA	-3	True	AATAAA	-14	NA	89690754	89681534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89683949_89686430_89686547_89690576
transcript_33858.known	chr15	-	905	2	FSM	ENSG00000166821.9	ENST00000559170.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATGTGGGCAGAGATG	NA	False	NA	NA	False	NA	NA	NA	89690783	89683250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89683949_89690576
transcript_33860.known	chr15	-	1262	7	FSM	ENSG00000157823.17	ENST00000423566.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	213.713723367395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	-89888388	True	NA	NA	False	NA	NA	NA	89893977	89834981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
transcript_33861.known	chr15	-	738	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	207.380018859634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTGAGCCTTAGAAG	-89888405	True	NA	NA	False	NA	NA	NA	89893994	89835439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
transcript_33862.known	chr15	-	578	6	FSM	ENSG00000157823.17	ENST00000558806.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	180.590143695607	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCCAGAGATTCCTC	-89888439	True	NA	NA	False	AAAACA	-2	NA	89894028	89835593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889137_89893880
transcript_33864.nnic	chr15	-	1799	5	NIC	ENSG00000157823.17	novel	5543	6	NA	NA	-3	674	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	194.936528131595	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAAGGTTTGTTGCTGTG	-89888442	True	NA	-11	True	AATACA	-15	NA	89894031	89834307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_89835644_89837614_89837723_89888520_89888633_89889048_89889141_89893880
transcript_33866.known	chr15	-	2658	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_8	45.1819654286973	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCCTCTGCATAGTA	-90099104	True	NA	-15	True	AATAAA	-30	NA	90102468	90083044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
transcript_33874.known	chr15	-	1141	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	44.0293462741991	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTGAAGAATTAAAAAC	-90228515	True	NA	-2	True	AGTAAA	-16	NA	90233941	90229974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
transcript_33875.nic	chr15	-	934	7	NIC	ENSG00000185043.12	novel	906	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	187.588201476887	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	NA	False	NA	-38	True	AATAAA	-16	NA	90234093	90230249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233918
transcript_33878.known	chr15	-	1096	7	FSM	ENSG00000185043.12	ENST00000612800.1	1096	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	184.376125231971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTGACATGAGATACAC	NA	False	NA	-34	True	AATAAA	-20	NA	90234047	90230245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232448_90233668_90233704_90233834
transcript_33885.known	chr15	+	5258	5	FSM	ENSG00000183208.13	ENST00000559204.6	5258	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.84700778176325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	90233713	True	NA	NA	False	AGTAAA	-23	NA	90234197	90245811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90234293_90234521_90234597_90236062_90236182_90238491_90238549_90240899
transcript_33890.known	chr15	+	5128	4	FSM	ENSG00000183208.13	ENST00000329600.8	5128	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.35412613473634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	90233724	True	NA	NA	False	AGTAAA	-23	NA	90234208	90245811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90234293_90234521_90234597_90238491_90238549_90240899
transcript_33894.known	chr15	+	1340	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	713.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	90245755	True	NA	11	True	AATAAA	-17	NA	90265671	90272211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90265877_90266287_90266399_90271187
transcript_33897.known	chr15	+	2784	2	FSM	ENSG00000182768.9	ENST00000331497.3	2784	2	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_1	0	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATCAATTATTATTG	90245742	True	NA	NA	False	ATTAAA	-16	NA	90265658	90273231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90266399_90271187
transcript_33899.known	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	90377226	True	NA	9	True	AATAAA	-28	NA	90388354	90391932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90388397_90390773
transcript_339.nic	chr1	-	1894	11	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-2	0	intron_retention	FALSE	canonical	2	3	junction_10	20.0489401216124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115106	True	NA	-11	True	TATAAA	-16	NA	1116097	1081822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1115021_1115076_1116059
transcript_3390.known	chr1	+	1685	7	FSM	ENSG00000117410.14	ENST00000532642.5	1685	7	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_2	58.7066625028388	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCACCTGTGTCCCCC	43966127	True	NA	-74	True	NA	NA	NA	43974943	43978213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
transcript_33903.known	chr15	-	502	3	FSM	ENSG00000259736.1	ENST00000558105.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTTTCCCATAGAGA	-90716694	True	NA	NA	False	ATTAAA	-16	NA	90717049	90712992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90713300_90714920_90715043_90716976
transcript_33906.known	chr15	+	5240	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_9	27.5337764125703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	90711418	True	NA	NA	False	AATAAA	-16	NA	90717345	90816166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
transcript_33911.nic	chr15	+	1659	7	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-33	51039	-16	95	5prime_fragment	FALSE	canonical	3	195	junction_6	9.23158828275082	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCTCTTATTTCCCAG	90711402	True	NA	NA	False	NA	NA	NA	90717329	90760917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593
transcript_33917.nic	chr15	+	208	2	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-33	64471	-16	-2475	5prime_fragment	FALSE	canonical	3	216	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTAAGTGTTTTGACT	90711402	True	NA	5	True	AATAAA	-22	NA	90717329	90747485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_90717441_90747388
transcript_33919.known	chr15	+	2327	17	FSM	ENSG00000182511.12	ENST00000414248.6	2327	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	12.1243556529821	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCGTGTCCTCTCTGTGT	90883867	True	NA	-76	True	NA	NA	NA	90884446	90895693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90884545_90885036_90885259_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_33920.known	chr15	+	3252	20	FSM	ENSG00000140553.18	ENST00000418476.2	3252	20	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	40.6274200216766	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	90927005	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90935376_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_33921.known	chr15	+	4002	23	FSM	ENSG00000140553.18	ENST00000672480.1	4002	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	113.611169934493	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	NA	False	NA	26	True	AATAAA	-17	NA	90930179	90954093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90930256_90933976_90934144_90934338_90934550_90934943_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_33930.known	chr15	-	457	4	FSM	ENSG00000184508.12	ENST00000561036.1	457	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	79.432710866214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCGGCAACTGGAAGAG	-90930519	True	NA	NA	False	GGGGCT	-9	NA	90932476	90931336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932385
transcript_33931.known	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	11.0855260988773	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-90930592	True	NA	-18	True	ATTAAA	-16	NA	90932549	90929967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
transcript_33932.nnic	chr15	-	968	4	NNC	ENSG00000184508.12	novel	1309	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.5804612412582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTGCTCCTTCTCC	-90930630	True	NA	-1	True	AATAAA	-24	NA	90932587	90930917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_90931406_90931703_90931969_90932054_90932111_90932428
transcript_33933.known	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.3202753190433	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930589	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
transcript_33934.known	chr15	-	1024	3	FSM	ENSG00000184508.12	ENST00000559898.5	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGTGGTGGGAATCAGATG	-90930593	True	NA	NA	False	NA	NA	NA	90932550	90931098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931945_90932054_90932111_90932428
transcript_33937.known	chr15	-	1220	3	FSM	ENSG00000184508.12	ENST00000494993.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930595	True	NA	-8	True	AATAAA	-17	NA	90932552	90930924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931406_90931703_90931945_90932054
transcript_33938.known	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_17	14.6203328358627	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-91021153	True	NA	-1	True	AATAAA	-21	NA	91022594	90998672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
transcript_33943.nnic	chr15	-	2535	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	91.3476356155121	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986113	True	NA	-4	True	AATAAA	-30	NA	90994589	90966039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_33945.nic	chr15	-	3007	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	73.3007906994172	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986113	True	NA	-4	True	AATAAA	-30	NA	90994589	90966039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_33946.nic	chr15	-	2448	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	79.3963914938741	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	-90986113	True	NA	-14	True	AATAAA	-20	NA	90994589	90966049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_33948.known	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	85.1934797627309	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-41	True	AATATA	-13	NA	90995629	90966076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_33954.nic	chr15	-	2352	13	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_12	119.358237624761	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	-90986150	True	NA	-14	True	AATAAA	-20	NA	90994626	90966049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90994406
transcript_3396.known	chr1	+	944	7	FSM	ENSG00000117410.14	ENST00000236067.8	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	592.221078276986	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCAGCTTCTGTT	43966131	True	NA	2	True	AATAAA	-15	NA	43974947	43978289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975108_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_33965.known	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	118.0140297782	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986059	True	NA	-4	True	AATAAA	-30	NA	90994535	90966039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_33967.known	chr15	+	435	1	FSM	ENSG00000278514.1	ENST00000620171.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAATGTGTGGATCTT	91022743	False	NA	NA	False	AATAAA	-28	NA	91022765	91023200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_91022800_91023200
transcript_33969.known	chr15	-	2604	3	FSM	ENSG00000185442.13	ENST00000327355.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTACCTTGGGCTTG	-92653493	True	NA	-8	True	AATAAA	-18	NA	92655775	92617447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_92619460_92630213_92630346_92655315
transcript_33970.known	chr15	-	409	2	FSM	ENSG00000185442.13	ENST00000554082.1	409	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGCCTCGAGGTATTTT	-92809731	True	NA	NA	False	ATTAAA	-16	NA	92809884	92808843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_92809014_92809645
transcript_33971.known	chr15	+	2232	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.7723691511805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	92895052	True	NA	8	True	AATAAA	-17	NA	92900323	92949234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
transcript_33973.known	chr15	+	1740	2	FSM	ENSG00000173575.22	ENST00000627622.1	1740	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGTGATTCATTATG	92895049	True	NA	NA	False	TATAAA	-21	NA	92900320	92902402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92900825_92901166
transcript_33977.known	chr15	+	802	5	FSM	ENSG00000272888.8	ENST00000556895.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	146.443461786452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCACACTAACCCAGATA	92882826	False	NA	-96	True	AAGAAA	-2	NA	92882861	92897975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_33979.nic	chr15	+	705	5	NIC	ENSG00000279765.3	novel	808	7	NA	NA	0	-29258	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	364.254375402685	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	92883382	False	NA	1	True	AATAAA	-2	NA	92883412	92898072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_92883544_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_33981.nnic	chr15	+	767	5	NNC	ENSG00000272888.8	novel	1776	4	NA	NA	-399	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	372.361635376149	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	92884892	False	NA	1	True	AATAAA	-2	NA	92884924	92898072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_92885118_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_33984.known	chr15	-	1358	3	FSM	ENSG00000258433.2	ENST00000554649.2	1358	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAGGTGACCAAAACA	-95046907	True	NA	NA	False	AAGAAA	-2	NA	95047088	95034107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_95034745_95035383_95035739_95046722
transcript_33989.nnic	chr15	+	821	5	NNC	ENSG00000259485.2	novel	1149	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	17.1828402774396	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295813	97432086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_97295976_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_3399.known	chr1	+	2466	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_5	28.93717332429	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966060	True	NA	12	True	AATAAA	-15	NA	43970009	43973369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_33991.nnic	chr15	+	665	4	NNC	ENSG00000259485.2	novel	956	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	19.1891172861657	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295813	97432086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_97295976_97411191_97411279_97429769_97429890_97431790
transcript_33993.nnic	chr15	+	975	4	NIC	ENSG00000259485.2	novel	956	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.5130350811337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	97295057	True	NA	NA	False	AATAAA	-19	NA	97295828	97432086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_97296324_97372327_97372392_97429769_97429890_97431790
transcript_33994.nnic	chr15	+	861	3	NIC	ENSG00000259485.2	novel	956	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	97295107	True	NA	NA	False	AATAAA	-19	NA	97295878	97432086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_97296324_97429769_97429890_97431790
transcript_33995.known	chr15	+	956	4	FSM	ENSG00000259485.2	ENST00000655490.1	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	13.9283882771841	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACACACTTGTGCTTTT	97295103	True	NA	NA	False	AATAAA	-23	NA	97295874	97432090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_97296324_97411191_97411279_97429769_97429890_97431790
transcript_33996.known	chr15	+	1149	5	FSM	ENSG00000259485.2	ENST00000656523.1	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	18.364367672207	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACACACTTGTGCTTT	97295065	True	NA	NA	False	AATAAA	-22	NA	97295836	97432089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_97296324_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_33997.known	chr15	+	798	3	FSM	ENSG00000259485.2	ENST00000659377.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	97295137	True	NA	NA	False	AATAAA	-19	NA	97295908	97432086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_97296324_97411191_97411279_97431790
transcript_33998.nnic	chr15	-	386	2	NNC	ENSG00000259424.2	novel	334	2	NA	NA	-27	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAAGAAGTGGTTGTCT	-98647406	False	NA	-8	True	AATAAA	-39	NA	98647416	98646946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_98647197_98647280
transcript_33999.known	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	-98647361	False	109	-12	True	AATAAA	-35	NA	98647371	98646950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_98647194_98647280
transcript_34.known	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00084_+_0_1000
transcript_34003.known	chr15	+	967	10	FSM	ENSG00000168904.15	ENST00000561276.5	967	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	27.8288419529891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTAGTTTTGTGGCTT	99249996	True	NA	NA	False	NA	NA	NA	99251519	99386035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99251542_99255897_99255974_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34004.known	chr15	+	5852	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	8.84572854999784	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	99249957	True	NA	NA	False	NA	NA	NA	99251480	99390729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34006.known	chr15	+	1235	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	26.4516067564902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	99249981	True	NA	13	True	AATATA	-20	NA	99251504	99386296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_34007.nnic	chr15	+	1244	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	30.1454805899657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	99249925	True	NA	13	True	AATATA	-20	NA	99251448	99386296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34008.nic	chr15	+	1410	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	23.9361128840921	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	99249925	True	NA	13	True	AATATA	-20	NA	99251448	99386296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34018.nnic	chr15	-	601	3	NNC	ENSG00000183060.16	novel	2356	3	NA	NA	1	-4408	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	3	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCACAAAAAAGTTATTC	-99731480	True	NA	NA	False	AATAAA	-17	NA	99733420	99720110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_99720453_99720783_99720967_99733344
transcript_34020.known	chr15	-	2672	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	20	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731399	True	NA	0	True	AATAAA	-24	NA	99733339	99727404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_99729732_99731717_99732008_99733284
transcript_34021.known	chr15	-	2710	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731497	True	NA	0	True	AATAAA	-24	NA	99733437	99727404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_99729732_99731717_99732008_99733344
transcript_34023.known	chr15	-	2431	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	NA	False	NA	4	True	AATAAA	-28	NA	99733444	99727400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_99729732_99733344
transcript_34024.known	chr15	+	760	4	FSM	ENSG00000259363.6	ENST00000560059.6	760	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTACTTTAGGTGAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	99806984	99839086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99807099_99808146_99808303_99812972_99813087_99838710
transcript_34031.nnic	chr15	-	2421	7	NNC	ENSG00000140471.17	novel	4755	7	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.5361453272297	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTTATTTTCCAG	-100601285	True	NA	-6	True	AATAAA	-22	NA	100602217	100569234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_100570118_100571893_100572010_100573650_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602120
transcript_34033.known	chr15	-	4755	7	FSM	ENSG00000140471.17	ENST00000314742.13	4755	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.9626826512847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATGCAGATGTGGTTT	-100601252	True	NA	NA	False	CATAAA	-22	NA	100602184	100566923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_100570118_100571893_100572066_100573650_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602120
transcript_34036.known	chr15	-	2477	6	FSM	ENSG00000140471.17	ENST00000559149.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.6630104292671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGATGACTTTTTGAA	-100601242	True	NA	NA	False	AATAAA	-16	NA	100602174	100572202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_100573301_100573650_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602120
transcript_34038.known	chr15	+	1694	5	FSM	ENSG00000183475.13	ENST00000343276.4	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.97390157267426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGATTTCATAAAAAT	100601348	True	NA	NA	False	AATAAA	-19	NA	100602608	100630209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436
transcript_34039.known	chr15	-	1612	5	FSM	ENSG00000140471.17	ENST00000561308.5	1612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.4572725454788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTGTTGAGTC	-100601239	True	NA	NA	False	AATGAA	-31	NA	100602171	100573414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602120
transcript_34040.known	chr15	-	1196	5	FSM	ENSG00000140471.17	ENST00000560133.5	1196	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.3201142470194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGTCAGCTTTTTGT	-100601242	True	NA	NA	False	AAAAAG	-19	NA	100602174	100573476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_100574242_100574986_100575129_100580262_100580353_100580800_100580946_100602120
transcript_34041.known	chr15	+	4926	6	FSM	ENSG00000183475.13	ENST00000332783.12	4926	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.41848687365763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGAGTTGTATTTTA	100601328	True	NA	18	True	ATTAAA	-22	NA	100602588	100651701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436_100630043_100648322
transcript_34042.nnic	chr15	-	784	3	Fusion	ENSG00000259376.1_ENSG00000259755.1	novel	720	3	NA	NA	-14011	1639	multi-exon	FALSE	canonical	2	4	junction_2	10.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGTGTCTGGTTATGGG	-101063397	True	NA	68	True	AATAAA	-17	NA	101063467	101049092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr15_-_101049665_101050633_101050780_101063401
transcript_34045.nnic	chr15	-	719	3	Fusion	ENSG00000259376.1_ENSG00000259755.1	novel	720	3	NA	NA	-14011	1574	multi-exon	FALSE	canonical	2	4	junction_2	10.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGGGCTGACTTTAGG	-101063397	True	NA	3	True	ATTAAA	-30	NA	101063467	101049157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr15_-_101049665_101050633_101050780_101063401
transcript_34048.known	chr15	+	3469	13	FSM	ENSG00000184254.17	ENST00000329841.10	3469	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	11.3578166916005	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	100878968	True	NA	7	True	AATAAA	-18	NA	100879830	100916626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892509_100892640_100892944_100893007_100893953_100894083_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_3405.known	chr1	+	2414	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	145.978902585271	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966060	True	NA	12	True	AATAAA	-15	NA	43970009	43973369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_34050.nic	chr15	+	527	2	ISM	ENSG00000232386.9	ENST00000558254.5	755	4	-31	5662	-22	-5662	5prime_fragment	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCGTCTTCTTAGGT	100849686	True	NA	NA	False	AAGAAA	-10	NA	100849751	100850578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_100849911_100850210
transcript_34051.known	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	343.955786887404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	-101266737	True	NA	NA	False	NA	NA	NA	101277450	101270816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_34055.known	chr15	-	1218	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	75.5232414558591	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTACTTATTTCTCT	-101266772	True	NA	-8	True	ATTAAA	-21	NA	101277485	101272190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_34057.known	chr15	-	556	3	FSM	ENSG00000131871.15	ENST00000529968.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	41	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATCAAGAAGAATACACG	-101266787	True	NA	NA	False	NA	NA	NA	101277500	101275099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101275362_101276540_101276676_101277341
transcript_34058.known	chr15	-	355	2	FSM	ENSG00000131871.15	ENST00000534014.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAATA	-101266740	True	NA	NA	False	AGTAAA	-35	NA	101277453	101276432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101276676_101277341
transcript_34062.known	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	216.970620130929	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101276691	True	NA	-2	True	AATAAA	-22	NA	101295248	101281509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_34070.known	chr15	-	924	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	807.877617525055	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276647	True	NA	-6	True	AATAAA	-18	NA	101295204	101281513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_34079.known	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2243	junction_2	166.731737297439	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276725	True	NA	-6	True	AATAAA	-18	NA	101295282	101281513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_34083.known	chr15	-	556	6	FSM	ENSG00000131876.18	ENST00000394082.8	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	1120.17380794232	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGTGTTAGCAAAGT	-101276646	True	NA	NA	False	NA	NA	NA	101295203	101281653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101295096
transcript_34084.known	chr15	-	506	5	FSM	ENSG00000131876.18	ENST00000540017.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	1223.04180222918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAATAGGCCCTCTTG	-101276698	True	NA	NA	False	NA	NA	NA	101295255	101281708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101295096
transcript_34089.known	chr15	-	1395	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	91.358633965269	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGCCTGTTTTCTA	-101650917	True	NA	63	True	AATAAA	-17	NA	101652381	101641847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_34090.known	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	97.7113094784836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-101650912	True	NA	NA	False	NA	NA	NA	101652376	101632976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_34091.known	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	24.3002057604457	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-101652381	False	NA	65	True	AATAAA	-19	NA	101652391	101641845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_34094.known	chr15	-	503	3	FSM	ENSG00000259658.5	ENST00000558592.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	101745710	101737098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101737370_101744440_101744597_101745634
transcript_34097.known	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	106	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	101953192	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_101961642_101966069_101966224_101966521
transcript_34098.known	chr16	-	1372	3	FSM	ENSG00000161980.6	ENST00000293860.6	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	2	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATGTTGATCAGTTCC	-45383	True	NA	NA	False	NA	NA	NA	53608	46406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_47558_51557_51646_53475
transcript_34100.known	chr16	+	831	6	FSM	ENSG00000161981.11	ENST00000397876.6	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	450.564534778316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAATGCCCTAGTCACA	43486	True	NA	-58	True	NA	NA	NA	53886	57372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_54059_55458_55550_55776_55883_56320_56421_56538_56614_57085
transcript_34103.known	chr16	+	1085	5	FSM	ENSG00000161981.11	ENST00000383018.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	31.8040877875785	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGCTCACAGTGGC	43428	True	NA	13	True	AATAAA	-24	NA	53828	57668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
transcript_34105.known	chr16	+	279	1	FSM	ENSG00000278995.1	ENST00000624755.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACAGCCTTGTTGC	74660	False	NA	NA	False	NA	NA	NA	74682	74961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74700_75000
transcript_34106.known	chr16	-	2784	12	FSM	ENSG00000103148.17	ENST00000399953.7	2784	12	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_9	32.4513622070154	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-137678	False	NA	-44	True	AATAAA	-32	NA	138512	85800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
transcript_34107.known	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	28.7556757682529	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	68922	True	NA	28	True	AATAAA	-19	NA	78224	85846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78334_79424_79701_83051_83257_85400
transcript_34108.known	chr16	+	576	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	172875	173710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_173008_173124_173330_173471
transcript_34109.known	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	176664	False	NA	NA	False	AATAAA	-17	NA	176679	177522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_176812_176928_177134_177282
transcript_34110.known	chr16	+	504	3	FSM	ENSG00000206172.8	ENST00000397797.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	176688	False	NA	NA	False	AATAAA	-17	NA	176703	177522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_176763_176928_177134_177282
transcript_34111.known	chr16	+	528	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	8	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	179972	True	NA	10	True	AGTAAA	-17	NA	180458	181179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_180582_180665_180871_180979
transcript_34119.nic	chr16	-	1598	12	NIC	ENSG00000007392.17	novel	1520	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	235.183803625172	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-219495	True	NA	-31	True	AATAAA	-23	NA	229479	188989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_3413.known	chr1	+	1738	5	FSM	ENSG00000132768.14	ENST00000396758.6	1738	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	165.611744752599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAACCTAAATAAACCAGA	43966075	False	NA	-17	True	NA	NA	NA	43970024	43973340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43972157_43972335_43972414
transcript_34131.known	chr16	-	1520	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	196.873157134232	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCCTCTGCGTAGAG	-219466	True	NA	-16	True	AATAAA	-38	NA	229450	188974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_34137.known	chr16	-	1504	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	150.898870558406	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGCGTAGAGGCTT	-219479	True	NA	-12	True	AATAAA	-42	NA	229463	188970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34140.known	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_9	66.7096157949225	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-219465	True	NA	-31	True	AATAAA	-23	NA	229449	188989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34147.known	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	207.450127875486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-219450	True	NA	NA	False	NA	NA	NA	229434	189895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_34154.nic	chr16	-	1290	9	NIC	ENSG00000007392.17	novel	1434	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	179.021603095828	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-229447	False	NA	-31	True	AATAAA	-23	NA	229482	188989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_189340_189967_190136_190540_190571_192926_193016_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34158.known	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	66.317418526357	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-219479	True	NA	-10	True	AATAAA	-44	NA	229463	188968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34165.known	chr16	-	423	3	FSM	ENSG00000007392.17	ENST00000442701.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	291.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTAGTTTAAAATTT	-190488	False	NA	34	True	AATACA	-6	NA	190549	189114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189946_190136_190540
transcript_34171.nnic	chr16	+	2913	13	NNC	ENSG00000167930.17	novel	2909	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	235.816077107186	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	234704	False	NA	14	True	AATAAA	-23	NA	234789	266096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262199_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_34172.known	chr16	+	2909	13	FSM	ENSG00000167930.17	ENST00000399932.8	2909	13	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	95.1506116054379	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	226460	True	NA	14	True	AATAAA	-23	NA	234820	266096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_34177.nic	chr16	+	1160	6	NIC	ENSG00000167930.17	novel	984	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	307.022214180017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAATCAAGGAATCT	234704	False	NA	7	True	AATAAA	-17	NA	234789	260788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_260412
transcript_34178.known	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.72046505340853	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	280559	True	NA	14	True	ATTAAA	-22	NA	280590	283010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_34179.nic	chr16	+	1412	5	ISM	ENSG00000167930.17	ENST00000399932.8	2909	13	-31	5308	-12	0	5prime_fragment	FALSE	canonical	3	536	junction_1	130.958963038045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAATCAAGGAATCT	234704	False	NA	7	True	AATAAA	-17	NA	234789	260788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968
transcript_3419.known	chr1	-	2044	4	FSM	ENSG00000285649.1	ENST00000647729.1	2044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTATAGCCCTCCTC	NA	False	NA	NA	False	AATACA	-13	NA	43974821	43968350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43969644_43970040_43970308_43973363_43973469_43974442
transcript_34195.nnic	chr16	-	1113	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	1	83	junction_5	687.286665082337	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-370366	False	NA	-20	True	AGTAAA	-16	NA	370389	367393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370335
transcript_34196.known	chr16	-	800	6	FSM	ENSG00000086504.18	ENST00000441883.5	800	6	0	0	0	0	multi-exon	FALSE	canonical	1	90	junction_5	685.248684785312	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCAGAGCCGGCGG	-359475	True	NA	NA	False	NA	NA	NA	370432	367723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370361
transcript_34199.nic	chr16	-	1124	6	NIC	ENSG00000086504.18	novel	1524	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	248	junction_5	640.780898591711	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-359551	True	NA	-20	True	AGTAAA	-16	NA	370508	367393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370443
transcript_342.known	chr1	-	1832	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	11.8800590263321	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115098	True	NA	-11	True	TATAAA	-16	NA	1116089	1081822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_3420.known	chr1	+	1664	7	FSM	ENSG00000117410.14	ENST00000473485.5	1664	7	0	0	0	0	multi-exon	FALSE	canonical	3	1545	junction_6	74.5490144505986	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCAGCTTCTGTTGCC	43966155	True	NA	5	True	AATAAA	-18	NA	43974971	43978292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_34200.known	chr16	-	865	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	0	0	0	0	multi-exon	FALSE	canonical	1	100	junction_5	682.346656766192	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACAGATCCCGGGGAG	-359552	True	NA	NA	False	NA	NA	NA	370509	367612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
transcript_34201.known	chr16	-	1524	6	FSM	ENSG00000086504.18	ENST00000199706.13	1524	6	0	0	0	0	multi-exon	FALSE	canonical	1	438	junction_3	576.441289291459	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGTGTTGGGATTACA	-359581	True	NA	-43	True	NA	NA	NA	370538	366968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370498
transcript_34209.known	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_4	498.456868745933	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-359552	True	NA	-10	True	AGTAAA	-26	NA	370509	367383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
transcript_3421.known	chr1	-	3206	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	5.86434417001413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	-44031451	False	NA	0	True	AATGAA	-21	NA	44031462	43996482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_34212.known	chr16	+	1012	9	FSM	ENSG00000242612.7	ENST00000424398.6	1012	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.0154724577217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAACACTCAGCTATT	401860	False	NA	NA	False	NA	NA	NA	401881	411976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_402044_404955_405025_406345_406362_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_34214.known	chr16	+	1551	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	26.2651741856017	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	401863	False	NA	4	True	ATTAAA	-16	NA	401884	412482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_34220.nic	chr16	+	1130	6	NIC	ENSG00000103202.13	novel	1193	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_2	1309.56649315718	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	370330	True	NA	14	True	AGTAAA	-21	NA	397246	400754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_397314_398207_398386_398989_399124_399378_399481_399626_399740_400218
transcript_34221.known	chr16	+	1167	6	FSM	ENSG00000103202.13	ENST00000448828.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	1308.57867933113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTGCACACCCA	370282	True	NA	-6	True	AGTAAA	-1	NA	397198	400734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
transcript_34225.known	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1196.79008184393	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	396418	True	NA	6	True	AGTAAA	-13	NA	396724	400746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
transcript_34228.known	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	1135.95254632401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	370320	True	NA	21	True	ATTAAA	-18	NA	397236	400648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
transcript_34230.known	chr16	+	1000	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	3	2194	junction_1	296.894762500116	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	370282	True	NA	14	True	AGTAAA	-21	NA	397198	400754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
transcript_34232.known	chr16	+	1775	2	FSM	ENSG00000007541.17	ENST00000476438.1	1775	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCAGGCTCGGTCCCGGG	581746	False	NA	9	True	AATAAA	-18	NA	581760	584108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_582310_582882
transcript_34233.known	chr16	+	1976	2	FSM	ENSG00000127578.7	ENST00000319070.3	1976	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	629792	True	NA	8	True	AATAAA	-21	NA	630984	634117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_631425_632581
transcript_34236.known	chr16	-	797	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	329.291117402216	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616793	True	NA	-18	True	AATAAA	-18	NA	636305	634429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
transcript_34238.known	chr16	-	755	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	414.677899097601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACAGCCCCACCCAGTC	-616727	True	NA	-101	True	NA	NA	NA	636239	634512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
transcript_34239.known	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	358.249563851793	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	-616819	True	NA	-90	True	NA	NA	NA	636331	634501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
transcript_34240.known	chr16	-	801	5	FSM	ENSG00000130731.16	ENST00000614890.4	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	476.879112039938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCTGCCCCACCTC	-616854	True	NA	-15	True	AATAAA	-21	NA	636366	634426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_634957_635611_635775_636093
transcript_34242.known	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	464.767683902399	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	-616766	True	NA	NA	False	NA	NA	NA	636278	634625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
transcript_34246.known	chr16	-	726	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	447.374214165278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616790	True	NA	-18	True	AATAAA	-18	NA	636302	634429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
transcript_34247.nnic	chr16	-	580	4	NIC	ENSG00000130731.16	novel	801	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	52	junction_3	549.618251354722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-616798	True	NA	-17	True	AATAAA	-19	NA	636310	634428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_634645_634718_634798_634888_634957_636093
transcript_34249.nic	chr16	-	987	4	NIC	ENSG00000130731.16	novel	518	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	419	junction_3	391.252121045014	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-616821	True	NA	-17	True	AATAAA	-19	NA	636333	634428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_634645_634718_634798_634888_635341_636093
transcript_34250.known	chr16	-	604	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	520.944228194237	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCTTGCTGGTGTC	-616839	True	NA	-26	True	AATAAA	-10	NA	636351	634437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_635280_635341_636093
transcript_34251.known	chr16	-	558	4	FSM	ENSG00000130731.16	ENST00000397665.6	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	550.675544722621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGACCTTGTGGACGACA	-616778	True	NA	-114	True	NA	NA	NA	636290	634525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_635611_635775_636093
transcript_34252.known	chr16	-	544	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	614.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-616830	True	NA	-17	True	AATAAA	-19	NA	636342	634428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_636093
transcript_34253.nnic	chr16	+	845	5	NIC	ENSG00000172366.20	novel	1050	6	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	214.162759367729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635804	True	NA	22	True	AATAAA	-15	NA	641920	648474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_642044_646471_646609_647416_647545_647782_647885_648119
transcript_34254.known	chr16	+	1050	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	175.418813130177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635729	True	NA	22	True	AATAAA	-15	NA	641845	648474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
transcript_34255.known	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	213.512733812295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	642362	False	NA	-15	True	GGGGCT	-5	NA	642450	648437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
transcript_34256.nnic	chr16	+	704	4	NIC	ENSG00000172366.20	novel	931	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	213.585267906442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635808	True	NA	22	True	AATAAA	-15	NA	641924	648474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_642044_647416_647545_647782_647885_648119
transcript_34257.nnic	chr16	+	1293	4	NIC	ENSG00000172366.20	novel	1379	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_1	227.724980330808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	642348	True	NA	22	True	AATAAA	-15	NA	642436	648474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_643145_647416_647545_647782_647885_648119
transcript_3426.known	chr1	+	1472	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	39.323776204734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991466	True	NA	14	True	ATTAAA	-18	NA	43991598	43996528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_34262.known	chr16	+	2490	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_10	175.760569462487	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	643613	True	NA	65	True	NA	NA	NA	668131	674171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34271.nic	chr16	+	2580	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-27	0	intron_retention	TRUE	canonical	3	897	junction_9	113.357260517846	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643559	True	NA	19	True	ATTAAA	-19	NA	668077	674125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34276.nic	chr16	+	2563	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-27	0	intron_retention	FALSE	canonical	3	197	junction_6	269.605388937136	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643559	True	NA	19	True	ATTAAA	-19	NA	668077	674125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34279.nic	chr16	+	2444	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-27	0	intron_retention	FALSE	canonical	3	182	junction_4	300.988383364566	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643559	True	NA	19	True	ATTAAA	-19	NA	668077	674125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_343.nnic	chr1	-	997	8	NNC	ENSG00000184163.3	novel	1036	8	NA	NA	-611	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.59369576880387	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTCGAGTGCTGCCTG	-1247318	False	NA	-2	True	AATAAA	-20	NA	1247333	1242448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1247167
transcript_34325.known	chr16	+	2559	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	294.246383590445	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	643616	True	NA	68	True	NA	NA	NA	668134	674174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34326.known	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	182.609989220922	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	-684352	False	NA	NA	False	CATAAA	-33	NA	684363	682527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
transcript_34327.known	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	63.7636695584214	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	674773	True	NA	15	True	NA	NA	NA	680409	682801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_3433.nic	chr1	+	1386	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	20	junction_1	33.3870315774107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991038	True	NA	14	True	ATTAAA	-18	NA	43991781	43996528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_34333.known	chr16	-	3243	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_6	17.8448171747429	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-688948	True	NA	-8	True	AATAAA	-15	NA	690398	684621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_34338.known	chr16	-	2095	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	20.8844439715306	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	-739275	True	NA	-13	True	AATAAA	-19	NA	740997	729764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_34345.known	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.4054503219269	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726874	True	NA	9	True	AATAAA	-14	NA	727105	729715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
transcript_34350.known	chr16	+	870	5	FSM	ENSG00000103254.10	ENST00000569529.6	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	25.0798724079689	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	719552	True	NA	17	True	GATAAA	-17	NA	721145	722590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_721437_721597_721703_721800_721942_722083_722135_722308
transcript_34351.known	chr16	+	3092	22	FSM	ENSG00000127586.17	ENST00000262315.14	3092	22	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_8	111.130941541051	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776820	True	NA	23	True	TATAAA	-23	NA	788619	798074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_34358.known	chr16	-	1835	5	FSM	ENSG00000007376.8	ENST00000567114.5	1835	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	88.5476566601285	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGACTCCAAATAAATGT	-785339	True	NA	-48	True	NA	NA	NA	788397	785013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_788255
transcript_34359.known	chr16	-	985	3	FSM	ENSG00000127588.5	ENST00000248150.5	985	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCAGCTTCCTGTCTCTG	-800631	False	103	NA	False	TATAAA	-5	NA	800734	798040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_798825_798979_799112_800665
transcript_34360.known	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	16.1418710191849	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-970480	True	NA	-3	True	NA	NA	NA	970984	853633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
transcript_34363.known	chr16	-	1603	10	FSM	ENSG00000103227.19	ENST00000568897.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	16.3095064303001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGACCCAGCCCCTCGGC	-970362	True	NA	-28	True	AATAAA	-3	NA	970866	854511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_954352_954667_970787
transcript_34365.known	chr16	-	1728	4	FSM	ENSG00000260807.7	ENST00000563863.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	11.4309521329882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGCTGTCTCCCAAGT	-980930	False	NA	-3	True	AATGAA	-19	NA	981298	975763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_977094_979024_979111_979600_979759_981144
transcript_34366.known	chr16	-	813	3	FSM	ENSG00000260807.7	ENST00000565069.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGACCTCCCAGAGAG	-980930	False	NA	NA	False	NA	NA	NA	981298	976520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_977094_979024_979111_981144
transcript_34372.known	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_1	889.361890024849	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1272406	True	NA	15	True	ATTAAA	-15	NA	1309634	1327018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34374.known	chr16	+	2832	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	749.829313910839	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1306613	True	NA	15	True	ATTAAA	-15	NA	1309152	1327018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34375.known	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	765.464437812467	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1308868	False	NA	15	True	ATTAAA	-15	NA	1308879	1327018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34377.known	chr16	+	2850	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	219.269240888913	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	1272407	True	NA	14	True	ATTAAA	-14	NA	1309635	1327017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34381.known	chr16	+	1771	4	FSM	ENSG00000103275.21	ENST00000473256.6	1771	4	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	122.532535361928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	1272407	True	NA	NA	False	NA	NA	NA	1309635	1317125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653
transcript_34382.known	chr16	+	1975	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.7966096824469	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	1347970	True	NA	NA	False	AATAAA	-20	NA	1351930	1364113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_34386.known	chr16	+	2313	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	12.2030152112875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1347985	True	NA	NA	False	GATAAA	-31	NA	1351945	1364387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_34388.known	chr16	-	1431	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	8.01498596380555	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	-1412548	False	2203	NA	False	AATAAA	-17	NA	1414751	1398304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_34390.known	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-1418544	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1420613_1420691
transcript_34391.known	chr16	-	1005	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-1418553	True	NA	-7	True	AATAAA	-22	NA	1420756	1419751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1419800_1420800
transcript_34393.known	chr16	+	3314	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	77.2369082757719	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	1490979	True	NA	NA	False	AATAAA	-15	NA	1493359	1510454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_34399.known	chr16	+	593	6	FSM	ENSG00000206053.13	ENST00000566742.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	418.873441507098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACACCTGTCCAATT	1655009	True	NA	NA	False	NA	NA	NA	1678289	1700225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810_1698844_1700073
transcript_344.known	chr1	-	2260	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	53.1750254662218	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-1264091	True	NA	-4	True	AAAAAG	-28	NA	1273854	1253911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
transcript_34405.known	chr16	+	3185	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	486.775759462198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	1654996	True	NA	85	True	NA	NA	NA	1678276	1701490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_34407.known	chr16	+	3695	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_4	39.2460189063808	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	1654998	True	NA	24	True	AATAAA	-32	NA	1678278	1702086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_34415.known	chr16	+	1065	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	477.883528348348	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	1654998	True	NA	44	True	NA	NA	NA	1678278	1699599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
transcript_34418.known	chr16	+	911	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	459.290273743692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	1654975	True	NA	NA	False	NA	NA	NA	1678255	1699428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
transcript_34426.known	chr16	-	811	5	FSM	ENSG00000103024.8	ENST00000564628.1	811	5	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_3	189.285993935103	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-1771416	False	NA	-6	True	AATAAA	-40	NA	1771495	1770319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771268_1771411_1771488
transcript_34427.known	chr16	-	848	5	FSM	ENSG00000103024.8	ENST00000219302.8	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	50.6186724440695	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-1771464	False	39727	-6	True	AATAAA	-40	NA	1771543	1770319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279_1771411_1771488
transcript_34429.known	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_3	52.5124323903926	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	-1771478	False	39727	-63	True	NA	NA	NA	1771557	1770376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
transcript_34433.known	chr16	-	891	3	FSM	ENSG00000103024.8	ENST00000563367.1	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	64	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGAGCTGCTCCAGGA	-1771464	False	39727	-147	True	NA	NA	NA	1771543	1770460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1770767_1770880_1771411_1771488
transcript_34434.known	chr16	-	468	2	FSM	ENSG00000261399.2	ENST00000570022.2	479	2	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAAGCATCTTCCTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	1714208	1713526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1713788_1714001
transcript_34440.known	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	113.598342124053	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	1771801	True	NA	16	True	ATTAAA	-25	NA	1782959	1789186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34444.known	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	74.2914680311422	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-1779501	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
transcript_34445.known	chr16	+	815	6	FSM	ENSG00000095906.17	ENST00000565134.5	815	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	116.460465394914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGACTTCATCCAGGAG	1771848	True	NA	NA	False	NA	NA	NA	1783006	1788613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788208_1788568
transcript_34446.known	chr16	+	1173	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	207.513854959133	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	1771773	True	NA	11	True	ATTAAA	-20	NA	1782931	1789181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34447.known	chr16	+	582	6	FSM	ENSG00000095906.17	ENST00000569898.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	290.235352774261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGACGCGACGCCCG	1771840	True	NA	NA	False	NA	NA	NA	1782998	1788680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788160_1788208_1788568
transcript_34449.known	chr16	+	995	6	FSM	ENSG00000095906.17	ENST00000565603.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	107.343187953405	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGAAACAGAGGCCT	1771837	True	NA	NA	False	NA	NA	NA	1782995	1788767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_3445.nnic	chr1	+	1157	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	41.9738675315434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991094	False	NA	14	True	ATTAAA	-18	NA	43991837	43996528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992005_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_34451.known	chr16	-	1628	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	71.2336998898695	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-1779487	True	NA	-8	True	AATAAA	-19	NA	1782557	1776717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
transcript_34456.known	chr16	+	2196	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	74.5800744166966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	1771773	True	NA	13	True	ATTAAA	-22	NA	1782931	1789183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34457.nnic	chr16	+	1099	5	NIC	ENSG00000095906.17	novel	1349	7	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	301.073080829223	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	1782878	False	NA	16	True	ATTAAA	-25	NA	1782891	1789186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_1783037_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34459.known	chr16	-	1746	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	77.9274502341761	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACCCACATGGCGTGA	-1779524	True	NA	-12	True	AATAAA	-15	NA	1782594	1776721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
transcript_34463.known	chr16	-	1040	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	1257	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGTGGTGTCTTTGCGCT	-1733423	True	NA	-4	True	AATAAA	-19	NA	1773150	1771889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1772535_1772603_1772647_1772798
transcript_34464.known	chr16	-	998	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_2	74	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGTCGTGGTGTCTTT	-1733407	True	NA	-9	True	AATAAA	-14	NA	1773134	1771894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1772514_1772603_1772647_1772798
transcript_34465.known	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	-1769628	False	NA	-10	True	AATAAA	-13	NA	1772698	1771895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1772514_1772603
transcript_34467.known	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	1826715	True	NA	11	True	AATAAA	-20	NA	1826940	1828914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1826900_1828900
transcript_34468.known	chr16	-	1363	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	-94	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	145.07131866775	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTCTTTTTTTTTG	-1938262	True	NA	-10	True	AATGAA	-9	NA	1943293	1938233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_1939144_1940777_1940812_1940814_1940893_1941256_1941406_1943101
transcript_34469.known	chr16	-	550	5	FSM	ENSG00000198736.13	ENST00000564908.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	159.204860164506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGACGGCCACCACAC	-1938168	True	NA	NA	False	AAGAAA	-41	NA	1943199	1939094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1940777_1940893_1941028_1941168_1941256_1941406_1943101
transcript_34470.known	chr16	-	1277	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	21.202725191719	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-1938168	True	NA	-5	True	AATGAA	-14	NA	1943199	1938228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
transcript_34471.known	chr16	-	847	3	FSM	ENSG00000198736.13	ENST00000399753.2	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGGGCGCAGTGGTT	-1938164	True	NA	-88	True	NA	NA	NA	1943195	1939018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1940777_1941406_1943101
transcript_34472.known	chr16	-	373	3	FSM	ENSG00000198736.13	ENST00000473663.1	373	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	146.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACTCATTTGCTGA	-1938092	False	NA	-11	True	NA	NA	NA	1943123	1938941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1941256_1941406_1943101
transcript_34474.known	chr16	-	2145	10	FSM	ENSG00000140986.8	ENST00000268661.8	2145	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.98761597999981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGCGCATG	-1952480	False	NA	NA	False	ATTAAA	-13	NA	1954689	1943973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1944894_1945498_1945619_1945834_1945931_1946624_1946727_1946937_1947099_1947193_1947381_1950843_1950980_1952873_1953043_1953955_1954149_1954628
transcript_34476.nnic	chr16	+	667	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCTGTGTGAATT	1943396	True	NA	NA	False	AATAAA	-24	NA	1943491	1944633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_1943756_1944230
transcript_34481.known	chr16	+	628	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	1138.434402541	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920785	True	NA	25	True	TATAAA	-14	NA	1959551	1961975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
transcript_34482.known	chr16	+	495	4	FSM	ENSG00000140990.15	ENST00000570172.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	1245.5982052367	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGGCAGAGGATGCT	1920791	True	NA	NA	False	NA	NA	NA	1959557	1961840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961292_1961496_1961612_1961796
transcript_34483.known	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2271	junction_3	200.769076857524	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920771	True	NA	25	True	TATAAA	-14	NA	1959537	1961975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
transcript_34485.known	chr16	+	830	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	56.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920776	True	NA	25	True	TATAAA	-14	NA	1959542	1961975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961292_1961496
transcript_34486.known	chr16	+	958	2	FSM	ENSG00000140990.15	ENST00000565031.1	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGGCAGCTGTGGGT	1920777	True	NA	-51	True	NA	NA	NA	1959543	1961899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152
transcript_34488.known	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	35178	junction_6	8060.65561160436	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-1202565	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
transcript_34496.nic	chr16	-	1117	4	NIC	ENSG00000140988.16	novel	1243	4	NA	NA	-22	0	intron_retention	FALSE	canonical	3	258	junction_3	22738.9589911236	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964720	False	NA	-27	True	AATAAA	-15	NA	1964863	1962060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_1962271_1962496_1963257_1964275_1964366_1964806
transcript_34497.known	chr16	-	170	3	FSM	ENSG00000140988.16	ENST00000563194.1	170	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	18966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTTGAAGATTATGCC	-1964698	False	NA	NA	False	NA	NA	NA	1964841	1963211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1963257_1964275_1964366_1964806
transcript_34498.known	chr16	+	275	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	60	0	60	0	multi-exon	FALSE	canonical	3	499	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	1964293	True	NA	15	True	AATAAA	-20	NA	1964958	1965509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1965130_1965405
transcript_34499.known	chr16	-	242	1	FSM	ENSG00000277602.1	ENST00000618631.1	242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTATTGAGCACCTT	-1971669	False	227	NA	False	AATAAA	-19	NA	1971896	1971654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1971700_1971900
transcript_34501.nnic	chr16	+	2539	23	NNC	ENSG00000183751.16	novel	6783	22	NA	NA	-11	21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	123.123644431855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCCTGGCCGGCTCTG	1966824	True	NA	4	True	CATAAA	-4	NA	1972041	1978738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551_1978658_1978721
transcript_34503.known	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_10	34.6318506488619	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	1966835	True	NA	NA	False	NA	NA	NA	1972052	1982929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_34507.known	chr16	+	2594	21	FSM	ENSG00000183751.16	ENST00000569628.5	2594	21	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_9	35.0341262200158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCCGGCCTCTCTCCA	1966868	True	NA	15	True	CATAAA	-15	NA	1972085	1978684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1972206_1974055_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_34513.known	chr16	+	483	2	FSM	ENSG00000127554.13	ENST00000567719.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTCTCAGTTGGG	1984688	False	NA	9	True	ATTAAA	-18	NA	1984710	1986115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1984944_1985865
transcript_34516.known	chr16	+	752	2	FSM	ENSG00000127561.16	ENST00000564642.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCACTGCCCAGGACGTG	1990127	True	NA	NA	False	NA	NA	NA	1992462	1993298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1992779_1992862
transcript_3452.known	chr1	+	728	6	FSM	ENSG00000159214.13	ENST00000490064.5	728	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.8914238317855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGGGCTGGTCACCGA	43991030	True	NA	NA	False	NA	NA	NA	43991773	43996155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43992005_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_34520.known	chr16	-	1030	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_3	22.7209154745138	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-2041567	True	NA	-6	True	AATAAA	-18	NA	2047834	2039819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
transcript_34521.nnic	chr16	-	1071	6	NNC	ENSG00000065057.9	novel	1030	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	248.142217286781	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-2041583	True	NA	-6	True	AATAAA	-18	NA	2047850	2039819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046392_2047708
transcript_34523.known	chr16	-	837	6	FSM	ENSG00000065057.9	ENST00000568513.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	262.540968231627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	-2041527	True	NA	-7	True	AATAAA	-17	NA	2047794	2039820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046279_2046367_2047708
transcript_34526.known	chr16	-	802	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	283.617149516738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	-2041511	True	NA	-7	True	AATAAA	-17	NA	2047778	2039820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
transcript_3453.nnic	chr1	+	1162	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-40	0	intron_retention	FALSE	canonical	3	10	junction_1	35.9466271018576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991684	True	NA	14	True	ATTAAA	-18	NA	43992181	43996528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992388_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_34532.known	chr16	+	1922	9	FSM	ENSG00000167964.13	ENST00000564426.5	1922	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	16.6240601238085	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCTGTCTCATCTGTTG	NA	False	NA	5	True	AATAAA	-15	NA	2148272	2154139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2148325_2148791_2148979_2149940_2150052_2151129_2151316_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2153223_2153318
transcript_34533.known	chr16	-	342	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	5	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	1085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCAAGTGTCTTTA	-2149463	True	NA	-1	True	AATAAA	-23	NA	2155358	2154796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2154923_2155142
transcript_34535.known	chr16	+	3683	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	0	0	0	0	multi-exon	TRUE	canonical	3	969	junction_5	92.2297538758507	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	2146535	True	NA	15	True	AATAAA	-21	NA	2155781	2178129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
transcript_34536.known	chr16	+	666	4	FSM	ENSG00000131653.13	ENST00000567653.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	85.5375161357089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTTGCTGCTGGGTA	2146557	True	NA	5	True	AATAAA	-16	NA	2155803	2168510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076
transcript_3454.nnic	chr1	+	1076	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-40	0	intron_retention	FALSE	canonical	2	8	junction_1	36.7238342224774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991684	True	NA	14	True	ATTAAA	-18	NA	43992181	43996528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992388_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_34544.known	chr16	+	1671	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	139.865504592805	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGCGAGGGTGCCG	2199266	True	NA	29	True	GATAAA	-19	NA	2205453	2209453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34547.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	170.90768707112	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	7	True	AATAAA	-16	NA	2205176	2209396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34548.known	chr16	+	1691	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	127.60485884166	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2203731	True	NA	8	True	AATAAA	-17	NA	2205740	2209397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34552.known	chr16	+	1403	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	148.199121427344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGGCTAGCCTGCACT	2199266	True	NA	NA	False	NA	NA	NA	2205453	2209098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34560.known	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	11.034491379307	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-2204821	False	NA	0	True	AATAAA	-15	NA	2210863	2209252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
transcript_34561.known	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	184.059772900001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	2203759	False	NA	-37	True	NA	NA	NA	2205768	2209352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34562.known	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-2208798	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2214054_2214137
transcript_34563.known	chr16	+	2548	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	28.1872437471132	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222137	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_34564.known	chr16	-	961	6	FSM	ENSG00000167969.13	ENST00000566379.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_2	50.7369687703158	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCCAGAAGTCCCTGC	-2243575	True	NA	NA	False	NA	NA	NA	2251591	2240036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315
transcript_34566.known	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_7	960.07244624602	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	-2267478	False	NA	75	True	AATAAA	-20	NA	2268126	2253119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
transcript_34569.known	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_6	696.613873597769	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-2267749	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_34572.known	chr16	-	830	6	FSM	ENSG00000205937.12	ENST00000567147.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1310.26766731077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGCAGGCAGCAGGC	-2240798	True	NA	NA	False	NA	NA	NA	2268071	2253855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2254064_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_34575.known	chr16	+	543	2	FSM	ENSG00000260778.5	ENST00000563734.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	NA	False	NA	4	True	AATAAA	-13	NA	2268154	2273418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2268266_2272986
transcript_34577.known	chr16	-	1826	1	FSM	ENSG00000205937.12	ENST00000566783.1	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	-2266680	False	NA	NA	False	NA	NA	NA	2267328	2265502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2265500_2267300
transcript_34578.known	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	32.8718510849328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	2424727	True	NA	30	True	ATTAAA	-20	NA	2429446	2458854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_34582.nic	chr16	+	1967	13	ISM	ENSG00000162063.13	ENST00000397066.9	4230	17	-8	8502	-8	477	5prime_fragment	FALSE	canonical	3	399	junction_1	35.6880776855365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTAGCTGGGCG	2424719	True	NA	NA	False	ACTAAA	-14	NA	2429438	2450352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827
transcript_34584.known	chr16	-	397	1	FSM	ENSG00000260095.1	ENST00000561653.1	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAAAGGAAGTGTAGTT	-2452872	False	NA	-5	True	AATAAA	-17	NA	2452977	2452580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2452600_2453000
transcript_34586.known	chr16	+	1633	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	37.0618435444539	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456231	True	NA	17	True	ATTAAA	-17	NA	2460108	2464963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_34588.nic	chr16	+	1595	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	74.7394432344796	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2460036	False	NA	17	True	ATTAAA	-17	NA	2460047	2464963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_34589.known	chr16	+	1864	9	FSM	ENSG00000162062.15	ENST00000563531.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	35.5824307067407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTTGTGTGATATTAAA	2456256	True	NA	-19	True	NA	NA	NA	2460133	2464927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_34593.nic	chr16	+	1825	8	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_1	78.8216793963256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	2456231	True	NA	16	True	ATTAAA	-16	NA	2460108	2464962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_34598.known	chr16	+	3172	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	26.6915717034423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2517578	True	NA	26	True	AATACA	-22	NA	2520370	2531417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_34599.known	chr16	+	2890	10	FSM	ENSG00000162066.16	ENST00000648227.1	2890	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_8	51.0315806361338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGATGGTTGGTCCACA	2517604	True	NA	NA	False	GGGGCT	-2	NA	2520396	2531230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528993_2529096_2529474
transcript_34600.known	chr16	+	3273	10	FSM	ENSG00000162066.16	ENST00000302956.8	3273	10	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_4	19.5448202856921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTCTGTGACATGAAGT	2517572	True	NA	31	True	AATACA	-27	NA	2520364	2531422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474
transcript_34603.known	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_1	27	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	2497202	True	NA	23	True	AATAAA	-15	NA	2513951	2520218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2514183_2519217_2519402_2519540
transcript_34606.known	chr16	+	2748	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2.49443825784929	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	NA	False	NA	NA	False	AATAAA	-23	NA	2603349	2630494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
transcript_34609.known	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	26.8894031172133	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	2675632	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
transcript_34611.known	chr16	-	1297	5	FSM	ENSG00000172382.10	ENST00000565903.5	1297	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.03112887414927	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCCACGTGGGGATC	-2720532	False	NA	-7	True	AATAAA	-17	NA	2720551	2712423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2716499_2716527_2720114
transcript_34612.known	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	3294.45192710411	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700877	True	NA	-3	True	AATAAA	-16	NA	2777277	2771413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
transcript_34616.known	chr16	+	461	4	FSM	ENSG00000167978.17	ENST00000576415.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	712.08348449384	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	2717064	True	NA	39	True	NA	NA	NA	2752713	2758524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469
transcript_34617.known	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	5348	junction_3	1397.77465995059	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700880	True	NA	-3	True	AATAAA	-16	NA	2777280	2771413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
transcript_34620.known	chr16	-	331	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2468.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTTGCTGCCTCTTT	-2700872	True	NA	-7	True	AATAAA	-16	NA	2777272	2771942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2776992_2777128_2777236
transcript_34621.known	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	3639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	-2700727	True	NA	-5	True	AATAAA	-18	NA	2777127	2771940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2775450_2775626_2776992
transcript_34622.known	chr16	-	997	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	7310	junction_1	724.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGCATTTCTCATTT	-2700795	True	NA	-4	True	AATAAA	-15	NA	2777195	2771414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2775450_2775557_2776992
transcript_34623.known	chr16	+	3250	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTCTGTGCATCG	2777179	False	NA	4	True	AATAAA	-15	NA	2777318	2780568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2777300_2780600
transcript_34625.known	chr16	+	1091	6	FSM	ENSG00000007038.11	ENST00000005995.8	1091	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.48193472919817	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTCATGGACAGC	2817162	True	NA	18	True	AATAAA	-39	NA	2817236	2821719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818676_2818970_2820954_2821110_2821365
transcript_34628.known	chr16	-	683	3	FSM	ENSG00000263280.3	ENST00000659109.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCATGTTATTTTGCT	-2868178	True	NA	NA	False	AATAAA	-11	NA	2868204	2866351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2866853_2867460_2867530_2868091
transcript_34629.known	chr16	+	990	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	4.96655480858378	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	2880923	True	NA	16	True	AATAAA	-26	NA	2883214	2899365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
transcript_3463.known	chr1	+	482	2	FSM	ENSG00000230615.8	ENST00000623351.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCTACTC	44030203	True	NA	NA	False	AATACA	-26	NA	44030442	44040273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44030558_44039906
transcript_34630.known	chr16	+	915	4	FSM	ENSG00000162076.13	ENST00000293981.10	915	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	83.6752983595252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCTTCTGGGTCCTT	2880921	True	NA	33	True	AATAAA	-43	NA	2883212	2899382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2883273_2895219_2895321_2896351_2896772_2899048
transcript_34631.known	chr16	-	1806	9	FSM	ENSG00000127564.17	ENST00000574730.5	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	189.988445372344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	-2971366	True	NA	-64	True	NA	NA	NA	2980439	2972848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2976825_2979647_2979913_2980285
transcript_34632.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_7	57.0360357581065	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTCATGTGGCAACAT	-2971373	True	NA	-23	True	AATAAA	-28	NA	2980446	2972807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_34633.known	chr16	-	1891	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	171.8245835147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGTGTCTAATAAAAAGT	-2971406	True	NA	-66	True	NA	NA	NA	2980479	2972850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
transcript_34635.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000440027.6	2061	9	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_2	181.416948973904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2980355	False	9073	-6	True	AATAAA	-45	NA	2980391	2972790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973254_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_34637.known	chr16	-	1892	9	FSM	ENSG00000127564.17	ENST00000574385.5	1892	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	226.08225826013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACCCAAGCTTGCTCA	-2971351	True	NA	-34	True	AATAAA	-17	NA	2980424	2972818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979937_2980285
transcript_34638.known	chr16	+	1583	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	3012854	True	NA	NA	False	AATAAA	-17	NA	3012922	3014505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3012900_3014500
transcript_34639.known	chr16	+	977	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_1	109.42374310704	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010371	True	NA	18	True	AATAAA	-19	NA	3020367	3022383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
transcript_3464.nic	chr1	+	1666	12	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.023551407888	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208746	True	NA	17	True	AATAGA	-15	NA	44213443	44220673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44213528_44213708_44213859_44214349_44214442_44214538_44214617_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34640.known	chr16	+	583	4	FSM	ENSG00000006327.14	ENST00000574699.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	772.970173350103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTGGGCCCAGGGTTC	3010371	True	NA	NA	False	NA	NA	NA	3020367	3021963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3020492_3021188_3021320_3021554_3021690_3021770
transcript_34643.known	chr16	+	881	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	766.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010362	True	NA	18	True	AATAAA	-19	NA	3020358	3022383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3020492_3021554_3021690_3021770
transcript_34644.known	chr16	+	1678	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	1616	junction_2	28	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010393	True	NA	18	True	AATAAA	-19	NA	3020389	3022383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3021320_3021554_3021690_3021770
transcript_34646.known	chr16	+	1300	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	318.157472825632	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	3017980	True	NA	64	True	AATAAA	-22	NA	3024040	3027755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_34650.known	chr16	+	1360	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	247.355625680023	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	3017993	True	NA	31	True	NA	NA	NA	3024053	3027722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_34654.known	chr16	+	1246	12	FSM	ENSG00000131652.14	ENST00000253952.9	1246	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	267.087783879234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTCTTTCTTTCTAT	3018003	True	NA	58	True	AATAAA	-16	NA	3024063	3027749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027576
transcript_34676.known	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	227.003854592824	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-3024268	False	NA	NA	False	NA	NA	NA	3024286	3022917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
transcript_34682.known	chr16	-	828	4	FSM	ENSG00000103145.11	ENST00000573095.1	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	260.926554161639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAGTCTGGAACCTG	-3024197	False	NA	-7	True	AATAAA	-18	NA	3024215	3022625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023531_3023846_3023969_3024180
transcript_34685.known	chr16	-	765	3	FSM	ENSG00000103145.11	ENST00000354679.3	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	340.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCCTTCTTCCCCAC	-3024061	True	NA	NA	False	NA	NA	NA	3024273	3022840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023413_3023846
transcript_34686.known	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3024057	True	NA	-6	True	AATAAA	-19	NA	3024269	3022624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023969_3024180
transcript_34687.known	chr16	-	410	3	FSM	ENSG00000261971.9	ENST00000572222.2	639	3	224	5	223	-5	multi-exon	FALSE	canonical	0	0	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGTGGTGGCATGTGCC	-3058595	False	NA	-4	True	AATAAA	-14	NA	3059085	3057860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3058018_3058539_3058703_3058995
transcript_34688.known	chr16	-	618	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_2	261.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3020032	True	NA	-6	True	AATAAA	-19	NA	3023961	3022624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023846
transcript_34689.known	chr16	-	656	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	151.836169018525	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3020013	True	NA	-6	True	AATAAA	-19	NA	3023942	3022624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
transcript_34690.known	chr16	-	845	5	FSM	ENSG00000103145.11	ENST00000574980.5	845	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	260.500959691131	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCATCCCACCCCCAAGA	-3024243	False	NA	-57	True	NA	NA	NA	3024261	3022675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3024133_3024211
transcript_34691.known	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	-3024243	False	NA	-44	True	NA	NA	NA	3024261	3022662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232
transcript_34692.known	chr16	+	1105	7	FSM	ENSG00000008517.19	ENST00000325568.9	1105	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.66874967458085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	3065278	False	NA	NA	False	TATAAA	-19	NA	3065296	3069667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065495_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_34693.known	chr16	+	818	7	FSM	ENSG00000008517.19	ENST00000525643.7	818	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4.14996653266291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGGGGAGATACCATG	3065490	True	NA	2	True	AATAAA	-17	NA	3065639	3069530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_34694.known	chr16	+	1056	6	FSM	ENSG00000008517.19	ENST00000008180.13	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.27375485654325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGATGGAGTTTCGCT	3065481	True	NA	NA	False	NA	NA	NA	3065630	3069819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_34695.known	chr16	+	623	6	FSM	ENSG00000008517.19	ENST00000552356.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.21218606705912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCTGTCCTGTGCCC	3065527	False	NA	NA	False	NA	NA	NA	3065676	3069409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065711_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_34696.known	chr16	+	920	7	FSM	ENSG00000008517.19	ENST00000440815.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.99205898780101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	3065350	False	NA	23	True	AATAAA	-38	NA	3065368	3069551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065495_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_34697.known	chr16	+	814	7	FSM	ENSG00000008517.19	ENST00000533097.6	814	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.99205898780101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGGAGATACCATGAT	3065464	True	NA	4	True	AATAAA	-19	NA	3065613	3069532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065656_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_34698.known	chr16	+	1014	5	FSM	ENSG00000008517.19	ENST00000548476.5	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2.12132034355964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTATACTTCCCTGG	3065512	True	NA	-14	True	AATAAA	-1	NA	3065661	3069514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_3470.known	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.697468928337	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208790	True	NA	25	True	AATAGA	-23	NA	44213487	44220681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34701.known	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	176.978642779291	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3086768	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
transcript_34702.known	chr16	-	2350	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	231.712645317428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCACTTTCACAGCTG	-3086769	True	NA	-130	True	NA	NA	NA	3099295	3088988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
transcript_34704.known	chr16	+	1968	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	15.1152976226809	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111346	True	NA	12	True	ATTAAA	-16	NA	3112585	3120517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_34705.known	chr16	+	2062	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	17.8457900419741	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111320	True	NA	12	True	ATTAAA	-16	NA	3112559	3120517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_34708.known	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-3134222	True	NA	NA	False	NA	NA	NA	3134882	3128671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3129654_3131746_3132104_3134629
transcript_34709.known	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	-3134167	True	NA	-12	True	CATAAA	-17	NA	3134827	3131667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3132104_3134629
transcript_34710.known	chr16	+	302	3	FSM	ENSG00000263011.2	ENST00000570700.2	305	3	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATGCTCAGACTTCA	3106685	True	NA	NA	False	AATAAA	-17	NA	3106763	3109576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3106831_3108248_3108332_3109424
transcript_34711.known	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.3637553541853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-3234188	True	NA	-122	True	AATATA	-13	NA	3235186	3223335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_34712.known	chr16	-	1350	5	FSM	ENSG00000010539.12	ENST00000575948.1	1350	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	19.1180542943052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGAACCCTTTCTGGG	-3234072	True	NA	NA	False	NA	NA	NA	3235070	3223891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_34713.known	chr16	-	3348	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	13.4721935853075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATAGTTTTTGTTTCTTGC	-3234169	True	NA	-5	True	NA	NA	NA	3235167	3222344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_34714.known	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	16.1709616287962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	-3234160	True	NA	-8	True	NA	NA	NA	3235158	3222324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_34717.known	chr16	-	3162	5	FSM	ENSG00000010539.12	ENST00000396871.8	3162	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	24.1078306780183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTTTCTTGCCTT	-3235445	False	NA	-2	True	NA	NA	NA	3235457	3222341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3235111
transcript_34722.known	chr16	+	629	4	FSM	ENSG00000262668.2	ENST00000576468.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATAAATCTTTCCATCTA	3188131	True	NA	NA	False	NA	NA	NA	3188211	3224779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3188480_3189748_3189799_3191237_3191338_3224568
transcript_34728.known	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	16.0043396892496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3303625	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_34729.known	chr16	+	2546	6	FSM	ENSG00000162086.16	ENST00000498240.6	2546	6	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	23.6474100061719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	3	True	AATAAA	-17	NA	3305405	3318574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_34730.known	chr16	+	2361	6	FSM	ENSG00000162086.16	ENST00000574298.6	2361	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24.3146046646866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGTTGGGCGAGGATG	3303600	True	NA	NA	False	AATAAA	-18	NA	3305471	3318852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_34732.known	chr16	+	598	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	30.019785142469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	3303636	True	NA	NA	False	NA	NA	NA	3305507	3317252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_34733.nic	chr16	+	1306	3	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	69	6209	3	0	5prime_fragment	FALSE	canonical	3	33	junction_2	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGAGTCCCTGAGTACT	3303603	True	NA	14	True	AATAAA	-28	NA	3305474	3312365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3305644_3308312_3308837_3311752
transcript_34736.nic	chr16	+	1322	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	69	9109	3	-7	5prime_fragment	FALSE	canonical	3	75	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAACAAAAAAAAAA	3303603	True	NA	NA	False	NA	NA	NA	3305474	3309465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3305644_3308312
transcript_34738.nic	chr16	+	1798	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	69	8633	3	469	5prime_fragment	FALSE	canonical	3	75	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAGCCAGGCTGATG	3303603	True	NA	NA	False	NA	NA	NA	3305474	3309941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3305644_3308312
transcript_34739.known	chr16	-	3421	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTGTTTCATAA	-3304617	True	NA	0	True	TATAAA	-44	NA	3305430	3298807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3302010_3305211
transcript_3474.nic	chr1	+	1614	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.960696095881	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208766	True	NA	17	True	AATAGA	-15	NA	44213463	44220673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34740.known	chr16	-	3108	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	6.82316316348624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399464	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_34745.nic	chr16	-	2854	5	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21.540659228538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399429	True	NA	-4	True	AATAAA	-17	NA	3400969	3382084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_3383712_3384458_3384942_3393648_3393815_3397191_3397745_3400944
transcript_34746.known	chr16	-	906	5	FSM	ENSG00000140987.21	ENST00000571906.1	906	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	21.1586270821148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTACAGGGCCATGGCG	-3399436	True	NA	NA	False	NA	NA	NA	3400976	3384839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3384942_3390009_3390134_3390422_3390518_3397191_3397745_3400944
transcript_34747.known	chr16	-	2441	4	FSM	ENSG00000140987.21	ENST00000576500.5	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	20.8486610281492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAACAGAAAGAAG	-3399455	True	NA	NA	False	NA	NA	NA	3400995	3382357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3383712_3384458_3384942_3397191_3397745_3400944
transcript_34749.known	chr16	+	1068	4	FSM	ENSG00000103343.13	ENST00000575752.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	33.9934634239519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCCTCCTCTGTG	3399105	True	NA	10	True	AATAAA	-19	NA	3401234	3405043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3404908
transcript_3475.known	chr1	+	1545	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.432363511938	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208757	True	NA	25	True	AATAGA	-23	NA	44213454	44220681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34751.known	chr16	+	1586	4	FSM	ENSG00000103343.13	ENST00000571936.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	33.4165627596057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTTGCATGTAAATCA	3399105	True	NA	NA	False	NA	NA	NA	3401234	3408973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3408320
transcript_34754.known	chr16	-	5483	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACTTTTTAAAAA	-3443188	True	NA	NA	False	ATTAAA	-23	NA	3443504	3432413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
transcript_34755.known	chr16	+	4083	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5362284915914	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	3500272	True	NA	NA	False	AATACA	-23	NA	3501003	3539048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
transcript_34766.known	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	114.607938607396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3442930	True	NA	20	True	AATAAA	-16	NA	3443679	3486953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_3477.nnic	chr1	+	1583	11	NNC	ENSG00000178028.14	novel	1742	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.528308854889	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208773	True	NA	17	True	AATAGA	-15	NA	44213470	44220673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34772.nic	chr16	+	2665	8	NIC	ENSG00000122390.19	novel	2656	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_2	117.19824474551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3442932	True	NA	19	True	AATAAA	-15	NA	3443681	3486952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_3443828_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_34774.known	chr16	+	2531	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	53.8072692321606	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454105	True	NA	19	True	AATAAA	-15	NA	3458077	3486952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_34775.known	chr16	+	2619	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	0	0	0	0	multi-exon	TRUE	canonical	2	90	junction_6	79.6061485620859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454039	True	NA	19	True	AATAAA	-15	NA	3458011	3486952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_34776.known	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	51.8204592800952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	3454072	True	NA	-19	True	NA	NA	NA	3458044	3486914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_34777.known	chr16	+	1089	6	FSM	ENSG00000122390.19	ENST00000572942.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	113.994034931658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGTGGCCCCCACTC	3454105	True	NA	NA	False	NA	NA	NA	3458077	3485786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485084_3485466
transcript_34779.nic	chr16	+	2414	6	NIC	ENSG00000122390.19	novel	2531	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_1	105.163872123463	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3454107	True	NA	20	True	AATAAA	-16	NA	3458079	3486953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_34781.known	chr16	+	561	5	FSM	ENSG00000122390.19	ENST00000571107.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	118.691564569686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATTCACTGCTCACGA	3454078	True	NA	NA	False	NA	NA	NA	3458050	3482911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3482824
transcript_34787.known	chr16	+	328	3	FSM	ENSG00000122390.19	ENST00000575042.1	328	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCTTCAGAACCATGA	3442996	True	NA	NA	False	NA	NA	NA	3443745	3450145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443838_3448470_3448541_3449979
transcript_34788.nic	chr16	+	419	3	NIC	ENSG00000122390.19	novel	326	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442901	True	NA	NA	False	AATAAA	-17	NA	3443650	3450165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_3443838_3448470_3448541_3450003
transcript_34791.known	chr16	+	326	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442984	True	NA	NA	False	AATAAA	-17	NA	3443733	3450165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443828_3448470_3448541_3450003
transcript_34792.known	chr16	+	3142	8	FSM	ENSG00000122390.19	ENST00000649205.1	3142	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	132.634683185332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCTGTCTCATTACGA	3442944	True	NA	-24	True	NA	NA	NA	3443693	3486909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443838_3447481_3447621_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_34793.known	chr16	+	1719	3	FSM	ENSG00000122390.19	ENST00000573201.6	1719	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTAAACCTCTTTTTTT	3442973	True	NA	NA	False	NA	NA	NA	3443722	3449945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443828_3447481_3447621_3448470
transcript_34794.known	chr16	+	1643	13	FSM	ENSG00000103351.13	ENST00000341633.9	1643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	33.0235606129254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAAGAGCTGACGCC	3500280	True	NA	104	True	NA	NA	NA	3501011	3536559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3533098_3533156_3536121
transcript_34795.known	chr16	-	2309	13	FSM	ENSG00000126602.11	ENST00000575671.5	2309	13	0	0	0	0	multi-exon	FALSE	canonical	3	1682	junction_11	119.954939456448	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTTGGGCTTTTTT	-3678259	False	NA	-3	True	TTTAAA	-17	NA	3678304	3658037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497
transcript_34796.known	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.03364928200306	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4270299	True	NA	-4	True	AATAAA	-20	NA	4273023	4257185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
transcript_34797.known	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_19	16.8420402857746	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-4415719	True	NA	-1	True	ATTAAA	-18	NA	4416596	4354541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_3480.nic	chr1	+	1651	11	NIC	ENSG00000178028.14	novel	1742	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	121.532876210513	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208778	True	NA	17	True	AATAGA	-15	NA	44213475	44220673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44213663_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34814.known	chr16	-	533	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_4	112.247494404107	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342273	True	NA	-6	True	AATAAA	-14	NA	4351321	4340250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_34820.known	chr16	-	606	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	298.033869719534	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342267	True	NA	-6	True	AATAAA	-14	NA	4351315	4340250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
transcript_34822.known	chr16	-	650	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	281.665138062913	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342222	True	NA	-6	True	AATAAA	-14	NA	4351270	4340250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
transcript_34825.known	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	345.309844761033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	-4342245	True	NA	-73	True	AAAAAG	-22	NA	4351293	4340317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
transcript_34830.nnic	chr16	+	2347	13	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	212.785543446917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425831	4456775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545_4456154_4456542
transcript_34831.known	chr16	+	2700	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_11	175.315206093491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425867	4456775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
transcript_34833.nnic	chr16	+	2157	12	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	27	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	165.071584772103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGAATGTAAAATGATT	NA	False	NA	13	True	AATAAA	-19	NA	4425831	4456702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545_4456154_4456542
transcript_34834.nnic	chr16	+	2230	12	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	165.071584772103	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425831	4456775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545_4456154_4456542
transcript_34835.known	chr16	+	2591	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	54.0522894982257	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425859	4456775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
transcript_34837.known	chr16	+	403	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	62.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAT	4426003	True	NA	NA	False	NA	NA	NA	4426047	4437625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4426093_4434383_4434518_4437401
transcript_34841.known	chr16	+	1797	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	218.97260102579	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	4476327	False	NA	-39	True	NA	NA	NA	4476339	4510295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_34843.nnic	chr16	+	1349	7	NIC	ENSG00000103415.12	novel	1703	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	224.153717098086	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGCCTGACAGCATC	4475857	True	NA	5	True	AATAAA	-14	NA	4476396	4509901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_4476488_4496145_4496267_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_34853.known	chr16	+	1727	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	193.229811364603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	NA	False	NA	12	True	AATAAA	-17	NA	4474702	4510346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_34855.known	chr16	+	1673	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	51.6975821484912	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	4475858	True	NA	13	True	AATAAA	-18	NA	4476397	4510347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_34859.known	chr16	-	1233	6	FSM	ENSG00000153406.14	ENST00000404295.7	1233	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	60.6478359053314	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471944	True	NA	-21	True	AATAAA	-16	NA	4474622	4461693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474409
transcript_34860.known	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	160.327913976325	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-4471965	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
transcript_34866.known	chr16	+	1027	5	FSM	ENSG00000103415.12	ENST00000575120.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	211.391816303281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGTGACTTTTTAAA	4475866	True	NA	-60	True	ACTAAA	-6	NA	4476405	4509836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4476488_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_3487.known	chr1	+	1742	10	FSM	ENSG00000178028.14	ENST00000372289.7	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.6510247861522	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208773	True	NA	17	True	AATAGA	-15	NA	44213470	44220673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_34874.known	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	137.31860762475	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471947	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
transcript_34878.known	chr16	-	2774	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_5	50.8999017680781	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATATGTGCTTTTTTA	-4533185	True	NA	20	True	AATGAA	-10	NA	4538470	4510674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
transcript_34879.known	chr16	-	2706	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	192.394802424598	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTTTTTAAAACCC	-4537551	True	NA	26	True	AATACA	-3	NA	4538773	4510668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_34884.known	chr16	-	1374	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGGCTCTGTGGTCTT	-4609815	True	NA	-5	True	NA	NA	NA	4614888	4608883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4609984_4610492_4610556_4614677
transcript_34885.known	chr16	-	1275	3	FSM	ENSG00000153443.13	ENST00000591897.5	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	137.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-4614386	True	NA	-4	True	NA	NA	NA	4615027	4608882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4609984_4610492_4610556_4614916
transcript_34886.known	chr16	+	709	3	FSM	ENSG00000168101.14	ENST00000590460.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCTGTCATCATCTCC	4688117	False	NA	NA	False	NA	NA	NA	4693760	4695292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4693880_4693983_4694239_4694957
transcript_34890.known	chr16	-	2302	17	FSM	ENSG00000168096.15	ENST00000592077.5	2302	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	49.3371294640254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	-4731951	True	NA	-4	True	AATAAA	-15	NA	4734219	4696511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4731511_4731580_4734155
transcript_34891.nic	chr16	-	2291	16	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_14	33.3235985785182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGCTCAGTTCTGGT	-4734243	False	NA	-3	True	AATAAA	-16	NA	4734275	4696510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4734155
transcript_34893.known	chr16	-	2272	15	FSM	ENSG00000168096.15	ENST00000450067.6	2272	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	38.6937214756174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	4734377	4696509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4729979_4730152_4734155
transcript_349.known	chr1	-	2004	18	FSM	ENSG00000127054.22	ENST00000527098.5	2004	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	164.280079853518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGGACAGACCCTGG	-1318743	True	NA	NA	False	NA	NA	NA	1324666	1311822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1323180_1323288_1324580
transcript_34900.known	chr16	-	834	2	FSM	ENSG00000168096.15	ENST00000590689.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATCCCTGGCCTTC	-4731927	True	NA	NA	False	AAAAAG	-7	NA	4734195	4729357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4730152_4734155
transcript_34901.nic	chr16	-	432	2	ISM	ENSG00000168096.15	ENST00000589065.5	561	6	-24	26021	0	-1906	5prime_fragment	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTCAGTTCTGTG	-4732003	True	NA	NA	False	AATAAA	-26	NA	4734271	4731263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4731580_4734155
transcript_34902.known	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_7	19.2429207762231	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4800017	True	NA	-7	True	AATAAA	-16	NA	4802633	4796967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_34905.nnic	chr16	-	944	5	NNC	ENSG00000067836.13	novel	1418	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.166056075281	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4800050	True	NA	-7	True	AATAAA	-16	NA	4802666	4796967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4802547
transcript_34906.known	chr16	+	394	4	FSM	ENSG00000267795.6	ENST00000588606.5	394	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTGCAGTGTCTT	4795324	True	NA	NA	False	NA	NA	NA	4795377	4796281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4795450_4795714_4795859_4795947_4796034_4796189
transcript_34907.known	chr16	+	628	4	FSM	ENSG00000267795.6	ENST00000586005.6	628	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCACGAGGTCAGGAGA	4795315	True	NA	NA	False	NA	NA	NA	4795368	4796491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4795450_4795714_4795859_4795947_4796049_4796189
transcript_34909.nic	chr16	-	3361	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	254	junction_1	145.988106857203	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832885	True	NA	-1	True	AATAAA	-19	NA	4847304	4803202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_3491.known	chr1	-	1733	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_8	337.182813915538	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-44347565	True	NA	-5	True	AATAAA	-39	NA	44355257	44221069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
transcript_34913.known	chr16	-	1831	16	FSM	ENSG00000140632.17	ENST00000591451.5	1831	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	175.970022699575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTCAGCAGGATTGG	-4832846	True	NA	NA	False	NA	NA	NA	4847265	4805048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_34914.known	chr16	-	3718	16	FSM	ENSG00000140632.17	ENST00000321919.14	3718	16	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_6	80.0298833075635	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832869	True	NA	-1	True	AATAAA	-19	NA	4847288	4803202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_34916.nic	chr16	-	1021	9	ISM	ENSG00000140632.17	ENST00000591451.5	1831	16	-39	16155	-16	0	5prime_fragment	FALSE	canonical	3	627	junction_1	86.313020454622	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGTCGGGTCTCCCTT	-4832885	True	NA	3	True	GATAAA	-25	NA	4847304	4821203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_34918.nic	chr16	-	2329	5	ISM	ENSG00000140632.17	ENST00000591451.5	1831	16	-39	25177	-16	2229	5prime_fragment	FALSE	canonical	3	750	junction_4	44.5112345369121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAAAGTTGGCCAGG	-4832885	True	NA	NA	False	NA	NA	NA	4847304	4830225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_34919.nnic	chr16	-	830	5	NNC	ENSG00000140632.17	novel	3606	14	NA	NA	-16	-6378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	400.562963215522	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCGGCTTGTTCTCACC	-4832885	True	NA	-1	True	AATAAA	-15	NA	4847304	4839242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_4839680_4843403_4843603_4845073_4845154_4846173_4846211_4847227
transcript_3492.nnic	chr1	-	1419	9	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_8	387.703958420597	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-44347619	True	NA	-5	True	AATAAA	-39	NA	44355311	44221069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44355259
transcript_34920.nnic	chr16	-	630	4	NNC	ENSG00000140632.17	novel	3606	14	NA	NA	-16	-6379	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	377.537930397581	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCGGCTTGTTCTCAC	-4832885	True	NA	-2	True	AATAAA	-14	NA	4847304	4839243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_4839680_4845073_4845154_4846173_4846211_4847227
transcript_34921.nic	chr16	-	901	3	ISM	ENSG00000140632.17	ENST00000587875.1	630	4	-22	11912	-16	-11502	5prime_fragment	FALSE	canonical	3	750	junction_2	53.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCATGTGTAAAACTAAG	-4832885	True	NA	NA	False	AATAAA	-19	NA	4847304	4844366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4845154_4846173_4846211_4847227
transcript_34922.known	chr16	-	630	4	FSM	ENSG00000140632.17	ENST00000587875.1	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	46.2913478836908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATTTAAATCCTTTCTT	-4832863	True	NA	NA	False	AATACA	-9	NA	4847282	4832454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4832913_4845073_4845154_4846173_4846211_4847227
transcript_34923.known	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_11	15.4189187544249	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	5068508	True	NA	23	True	GATAAA	-18	NA	5071842	5087379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_34926.known	chr16	+	1689	13	FSM	ENSG00000033011.14	ENST00000591822.5	1689	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3999733546454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTGGTTCTGTGAC	5068514	True	NA	-17	True	NA	NA	NA	5071848	5085018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072214_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_34928.known	chr16	+	1419	13	FSM	ENSG00000033011.14	ENST00000544428.1	1419	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3999733546454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTTCTTCTCTGGAGG	5068913	False	NA	22	True	NA	NA	NA	5072247	5085057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072304_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_34930.known	chr16	+	3053	12	FSM	ENSG00000033011.14	ENST00000683772.1	3053	12	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_6	13.5610038878499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGTTTGTGGTTCCTG	5068471	True	NA	-82	True	NA	NA	NA	5071805	5085487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5083758_5084749
transcript_34932.known	chr16	+	1952	12	FSM	ENSG00000033011.14	ENST00000684335.1	1952	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	86.0082640657472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGGAAATTAACATTC	5068471	True	NA	-64	True	NA	NA	NA	5071805	5085505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5082558_5082674_5083681_5083758_5084749
transcript_34934.nic	chr16	-	1356	9	NIC	ENSG00000118894.15	novel	1282	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	85.6416042294865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-5097333	True	NA	NA	False	NA	NA	NA	5097759	5085362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279_5097354_5097643
transcript_34937.known	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	49.6502050060507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-5097369	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
transcript_34939.known	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	102.272545042097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-5097340	True	NA	NA	False	NA	NA	NA	5097766	5085362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
transcript_3494.nnic	chr1	-	1371	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_7	366.026317778001	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44355339	44221069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44355259
transcript_34944.known	chr16	-	2268	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	69.7075239044458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-5097362	True	NA	NA	False	AATAAA	-17	NA	5097788	5084303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
transcript_34948.known	chr16	-	2203	10	FSM	ENSG00000103174.13	ENST00000312251.8	2203	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	6.8005083324886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-5033463	True	NA	2	True	AATAAA	-45	NA	5033935	5024843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_34952.known	chr16	-	873	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	99.5035677752311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGGAAAGCGGATAAA	-5097316	True	NA	NA	False	NA	NA	NA	5097742	5085571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
transcript_34954.known	chr16	-	2100	9	FSM	ENSG00000103174.13	ENST00000381955.7	2100	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.9613299897307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-5033462	True	NA	2	True	AATAAA	-45	NA	5033934	5024843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5025686_5027134_5027199_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_34955.nic	chr16	-	882	5	ISM	ENSG00000153446.16	ENST00000472572.8	1360	8	7267	0	-69	0	3prime_fragment	FALSE	canonical	2	8	junction_2	2.59807621135332	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	-5058470	True	NA	-35	True	AATAAA	-17	NA	5058689	5044121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492
transcript_34956.known	chr16	+	1580	3	FSM	ENSG00000078328.23	ENST00000585867.2	1580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGTTGTCAG	5239556	True	NA	NA	False	AATACA	-18	NA	5239814	5600151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5240106_5467215_5467255_5598901
transcript_34960.known	chr16	+	4974	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	25.3355481487968	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	8618964	True	NA	NA	False	AATACA	-17	NA	8621697	8649654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_34963.nnic	chr16	+	1452	10	NNC	ENSG00000067365.15	novel	1510	10	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	58.5607208347998	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618924	True	NA	17	True	AGTAAA	-18	NA	8621657	8646218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_8621776_8625495_8625799_8628729_8629026_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_34964.nnic	chr16	+	1409	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	-25	0	intron_retention	FALSE	canonical	3	34	junction_9	50.1526066183731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618924	True	NA	17	True	AGTAAA	-18	NA	8621657	8646218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_34966.known	chr16	+	1510	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	41.5980175216127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	8618957	True	NA	23	True	AGTAAA	-24	NA	8621690	8646224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_34973.known	chr16	+	4779	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.34306599330729	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	8673822	True	NA	5	True	AATAAA	-15	NA	8674616	8784570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
transcript_34979.known	chr16	+	2285	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.1556306634789	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	8792003	True	NA	27	True	ATTAAA	-15	NA	8797838	8849325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_34981.known	chr16	+	1085	7	FSM	ENSG00000140650.13	ENST00000682008.1	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.3777236878425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTCCCCGGTGCCACT	8797699	True	NA	NA	False	ATTAAA	-29	NA	8797715	8813385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990
transcript_34982.known	chr16	+	986	7	FSM	ENSG00000140650.13	ENST00000566604.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	143.787748666799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCCCCATCATTCTAG	8792001	True	NA	NA	False	NA	NA	NA	8797836	8848124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_34983.known	chr16	+	931	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	144.391154699848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCCACCCACCCCC	8792006	True	NA	NA	False	NA	NA	NA	8797841	8848051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_34984.known	chr16	+	793	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	146.030133876539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	8792031	True	NA	NA	False	NA	NA	NA	8797866	8848030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_34985.known	chr16	+	1036	4	FSM	ENSG00000140650.13	ENST00000564030.5	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	44.5745318414999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGCTGGAGTGCAGTGG	8791985	True	NA	NA	False	NA	NA	NA	8797820	8807034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315
transcript_34988.known	chr16	-	565	4	FSM	ENSG00000153048.11	ENST00000567908.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1048.39379793833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATCACTCACCTGGCAC	-8867862	False	NA	NA	False	NA	NA	NA	8867887	8855230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8867706
transcript_34989.known	chr16	-	3026	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	1037.13397827325	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	-8868376	False	NA	-2	True	AATAAA	-22	NA	8868401	8852941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
transcript_3499.nnic	chr1	-	1150	7	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-136	0	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_6	360.919543204115	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44355396	44221069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
transcript_34994.known	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	-8796393	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8796591_8797611
transcript_34995.known	chr16	-	2709	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_3	374.904728638564	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCGTGTGTTTGTGT	-8838668	True	NA	-7	True	AATAAA	-17	NA	8869006	8852946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
transcript_34996.known	chr16	-	1913	2	FSM	ENSG00000153048.11	ENST00000563815.5	1913	2	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCG	-8838668	True	NA	NA	False	AATACA	-10	NA	8869006	8857463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8859336_8868965
transcript_34997.known	chr16	+	498	2	FSM	ENSG00000261481.1	ENST00000570290.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATTTACTTGAGGCC	8869211	True	NA	NA	False	AATAAA	-14	NA	8869250	8870032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8869329_8869612
transcript_34998.known	chr16	-	480	1	FSM	ENSG00000220793.5	ENST00000484462.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGGTGTTAAAAAAAAA	-9156870	False	NA	NA	False	NA	NA	NA	9156881	9156401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_9156400_9156900
transcript_34999.nnic	chr16	+	1248	3	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTGTCCCTCAGGTTT	9672100	True	NA	12	True	AATAAA	-26	NA	9674330	9717660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_9674462_9701069_9701257_9716730
transcript_35.known	ERCC-00085	+	828	1	FSM	ERCC-00085A	DQ883669	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00085_+_0_800
transcript_35002.nnic	chr16	-	1206	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674575	True	NA	NA	False	AATAAA	-22	NA	9676934	9666884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667360_9674300_9674771_9676673
transcript_35007.nnic	chr16	-	1237	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674575	True	NA	NA	False	AATAAA	-22	NA	9676934	9666884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667391_9674300_9674771_9676673
transcript_35008.nnic	chr16	+	979	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGACTGTGTTTCTTGAT	9672075	True	NA	17	True	AATAAA	-32	NA	9674305	9717553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_9674462_9716730
transcript_35012.known	chr16	-	660	2	FSM	ENSG00000260362.1	ENST00000561538.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674484	True	NA	NA	False	AATAAA	-22	NA	9676843	9666884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_9667375_9676673
transcript_35015.nnic	chr16	+	601	4	Fusion	ENSG00000283221.1_ENSG00000287830.1	novel	179	2	NA	NA	-120229	39	multi-exon	FALSE	canonical	2	8	junction_3	22.9927524813074	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	9672177	True	NA	17	True	AATAAA	-20	NA	9674407	9810765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9810465
transcript_35021.nnic	chr16	+	700	4	Fusion	ENSG00000283221.1_ENSG00000287830.1	novel	179	2	NA	NA	-120328	39	multi-exon	FALSE	canonical	2	8	junction_3	22.9927524813074	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	9672078	True	NA	17	True	AATAAA	-20	NA	9674308	9810765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9810465
transcript_35022.known	chr16	+	576	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383162	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386123_10387143_10387291_10387377
transcript_35023.known	chr16	+	1681	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383165	True	NA	11	True	AATAAA	-21	NA	10386060	10387741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386100_10387700
transcript_35024.known	chr16	+	3665	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	11.6873881309005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	10383159	True	NA	19	True	AATAAA	-17	NA	10386054	10483638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
transcript_35025.known	chr16	-	5097	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	3.03108891324554	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCCCTCTGCTTCTTT	-10578905	True	NA	NA	False	GATAAA	-20	NA	10580598	10528421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
transcript_35027.known	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	26.4166614090426	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740779	True	NA	22	True	AATAAA	-16	NA	10743841	10769351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_35028.nic	chr16	+	1183	10	NIC	ENSG00000103274.11	novel	1231	11	NA	NA	20	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_9	73.7093055753143	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740743	True	NA	22	True	AATAAA	-16	NA	10743805	10769351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10769046
transcript_35030.known	chr16	+	1185	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	78.4551456345803	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740792	True	NA	22	True	AATAAA	-16	NA	10743854	10769351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_35032.nic	chr16	+	1198	10	NIC	ENSG00000103274.11	novel	1231	11	NA	NA	20	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_3	81.0118113625841	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740743	True	NA	22	True	AATAAA	-16	NA	10743805	10769351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_10743883_10743960_10744066_10747142_10747277_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_35041.nic	chr16	+	2138	10	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-22	122800	-5	-20932	5prime_fragment	FALSE	canonical	3	39	junction_9	4.44722135470878	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTAGTATTTTTAAA	10943207	True	NA	NA	False	NA	NA	NA	10944558	11003987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073
transcript_35044.known	chr16	+	1865	5	FSM	ENSG00000175643.10	ENST00000572173.1	1865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6393596310755	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTATGAGTTTTTTT	NA	False	NA	4	True	AATAAA	-8	NA	11249648	11351755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11249779_11295215_11295295_11312828_11312938_11316451_11316885_11350641
transcript_35046.known	chr16	+	818	2	FSM	ENSG00000175643.10	ENST00000576027.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTCAAACATTTAGAC	11338316	True	NA	NA	False	NA	NA	NA	11345449	11351365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11345544_11350641
transcript_35047.known	chr16	+	1427	2	FSM	ENSG00000175643.10	ENST00000312499.6	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	1258	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	11338325	True	NA	9	True	AATAAA	-13	NA	11345458	11351760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11345767_11350641
transcript_35048.known	chr16	-	399	2	FSM	ENSG00000175646.4	ENST00000312511.4	399	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACTCTTCTCTCCTTGT	-11281299	True	NA	NA	False	AATAAA	-14	NA	11281330	11280840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11281036_11281126
transcript_35049.known	chr16	-	505	2	FSM	ENSG00000263080.1	ENST00000572706.1	505	2	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGACATTAAGGCTATT	-11345002	True	NA	NA	False	ATTAAA	-13	NA	11345197	11344350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11344771_11345112
transcript_35055.known	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_3	99.6895180046528	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	-11581443	True	NA	-8	True	AATAAA	-16	NA	11586919	11547721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
transcript_35056.known	chr16	-	1118	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	218.187992336884	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACTTCATTAGCACA	-11587200	False	NA	NA	False	NA	NA	NA	11587247	11549106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
transcript_35057.known	chr16	-	2632	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	272.833282427199	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	False	NA	-8	True	AATAAA	-16	NA	11587563	11547721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
transcript_35063.known	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	11664809	True	NA	18	True	AATAAA	-33	NA	11668454	11679152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11668541_11675974
transcript_35064.known	chr16	+	808	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGAGGTCTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	11797467	11798275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11797500_11798300
transcript_35069.known	chr16	-	1323	9	FSM	ENSG00000171490.13	ENST00000355674.9	1323	9	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	770.147865266794	1695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAATCAAAGAAGAGGCA	-11830548	True	NA	-8	True	NA	NA	NA	11851544	11837965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11838114_11839694_11839986_11841694_11841818_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_3507.nnic	chr1	-	941	6	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-51	-24	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	511.325571431744	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGGTGTGTGTGCAAA	-44347619	True	NA	-29	True	AATAAA	-15	NA	44355311	44221093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
transcript_35072.known	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	826.031896404461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-11830584	True	NA	NA	False	NA	NA	NA	11851580	11837717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
transcript_35076.nic	chr16	-	1011	8	ISM	ENSG00000171490.13	ENST00000571133.6	5440	9	-82	6092	-44	-93	5prime_fragment	FALSE	canonical	3	2056	junction_2	208.939303753653	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGGAAGAAGAAGAGGC	NA	False	NA	-128	True	AAGAAA	-16	NA	11851624	11839941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_35080.known	chr16	-	871	7	FSM	ENSG00000171490.13	ENST00000570767.5	871	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	909.407988137826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAAAAGTTAGTA	-11830546	True	NA	21	True	NA	NA	NA	11851542	11841707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850414_11851403
transcript_35084.known	chr16	-	7141	15	FSM	ENSG00000103342.13	ENST00000434724.7	7141	15	0	0	0	0	multi-exon	FALSE	canonical	3	1628	junction_12	265.21546881349	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTCGTTTGTAATTA	-11898251	True	NA	-5	True	AATAAA	-23	NA	11915956	11868127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11915368
transcript_35088.known	chr16	-	6143	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.290634073484	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-12803059	True	NA	NA	False	ATTAAA	-21	NA	12803887	12659798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
transcript_35091.known	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12803023	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_12665116_12781184_12781404_12803706
transcript_35092.nnic	chr16	-	744	3	NNC	ENSG00000103381.12	novel	568	2	NA	NA	0	9198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTTGGTTTGCTGGG	-12803059	True	NA	NA	False	AATAAA	-14	NA	12803887	12771775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_12772120_12781184_12781404_12803706
transcript_35097.known	chr16	+	2803	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	8.29556065197599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTTCTCTGTTTA	13918614	True	NA	NA	False	NA	NA	NA	13920157	13936727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
transcript_35099.known	chr16	+	2073	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	7.57363849150459	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	13918613	True	NA	NA	False	AATAAA	-17	NA	13920156	13933247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
transcript_35100.known	chr16	+	604	3	FSM	ENSG00000175595.16	ENST00000576348.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTGAGATCTACTG	13918647	True	NA	NA	False	NA	NA	NA	13920190	13926801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_13920373_13922030_13922212_13926560
transcript_35104.known	chr16	-	2884	25	FSM	ENSG00000140694.17	ENST00000650990.1	2884	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	99.0074351865668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTGTGAAATCG	-14629720	True	NA	NA	False	NA	NA	NA	14630208	14435910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14588097_14588173_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35106.known	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	TRUE	canonical	1	107	junction_21	53.4902425602029	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	-14629772	True	NA	-1	True	ATTAAA	-16	NA	14630260	14435700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35110.nic	chr16	-	1608	18	ISM	ENSG00000140694.17	ENST00000651027.1	1740	22	-18	29060	-5	-4596	5prime_fragment	FALSE	canonical	1	107	junction_15	60.9353846895745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACATTGCTAGACGTAG	-14629777	True	NA	NA	False	ATTAAA	-24	NA	14630265	14580667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35115.known	chr16	-	2319	23	FSM	ENSG00000140694.17	ENST00000651634.1	2319	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.6653111959829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTATACAAAGAAATAA	-14629759	True	NA	NA	False	NA	NA	NA	14630247	14460743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14461271_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35116.known	chr16	-	2879	23	FSM	ENSG00000140694.17	ENST00000651049.1	2879	23	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	82.8788446623261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTTCTGATGCTTTAA	-14629720	True	NA	NA	False	AATAAA	-15	NA	14630208	14460708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14461835_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35118.known	chr16	+	2903	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	50.059556367126	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	14628271	True	NA	19	True	AATAAA	-30	NA	14632950	14669236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_35128.known	chr16	+	1662	6	FSM	ENSG00000103429.11	ENST00000563971.5	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	82.3883486908191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTGTCTTATTGAAG	14628251	True	NA	13	True	CATAAA	-31	NA	14632930	14668350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_3513.known	chr1	+	916	10	FSM	ENSG00000187147.18	ENST00000475378.5	916	10	0	0	0	0	multi-exon	FALSE	canonical	1	196	junction_5	122.810704483781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTGCCCCCAGCCT	44631982	True	NA	NA	False	NA	NA	NA	44632254	44650808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_35133.known	chr16	+	1414	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_2	22.6274169979695	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTATTTTGTGTCTG	14628252	True	NA	24	True	TATAAA	-14	NA	14632931	14650589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
transcript_35134.known	chr16	+	1177	3	FSM	ENSG00000103429.11	ENST00000566520.5	1177	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	121.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	14628251	True	NA	-9	True	NA	NA	NA	14632930	14650556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14649803
transcript_35137.known	chr16	-	587	5	FSM	ENSG00000069764.10	ENST00000567462.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.51920240520265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGTACAACTTAAAG	NA	False	NA	NA	False	NA	NA	NA	14694276	14672680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14672750_14678644_14678761_14688164_14688272_14690494_14690646_14694132
transcript_35139.known	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
transcript_3514.nic	chr1	+	1936	10	NIC	ENSG00000187147.18	novel	3099	15	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	1	196	junction_5	126.502330042465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625520	False	NA	NA	False	ATTAAA	-16	NA	44632227	44651723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_35141.nnic	chr16	+	1525	8	NNC	ENSG00000254852.8	novel	954	7	NA	NA	382	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	81.6593221742575	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	14751194	14765413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_14751730_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
transcript_35142.known	chr16	-	706	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGAGCCTTTCTGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	14824702	14822431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14823069_14824633
transcript_35143.known	chr16	+	4312	31	FSM	ENSG00000103512.16	ENST00000287667.12	4312	31	0	0	0	0	multi-exon	TRUE	canonical	3	744	junction_11	167.347359969881	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	NA	False	NA	22	True	AATAAA	-29	NA	14833720	14896157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14834017_14838406_14838497_14841361_14841408_14844673_14844775_14846576_14846684_14848898_14848972_14852429_14852583_14853466_14853605_14853936_14854027_14857216_14857323_14857504_14857656_14863012_14863188_14864584_14864727_14865023_14865156_14866554_14866692_14868547_14868636_14871620_14871685_14872233_14872330_14875035_14875255_14875339_14875423_14876358_14876519_14876663_14876791_14878720_14878835_14880014_14880143_14881543_14881686_14882593_14882678_14884371_14884483_14886760_14886863_14889095_14889216_14894997_14895091_14895513
transcript_35145.known	chr16	+	4598	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	48.2281938049306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	14975000	False	NA	NA	False	AATAAA	-17	NA	14975025	15038332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_35149.known	chr16	+	2183	14	FSM	ENSG00000179889.20	ENST00000455313.6	2183	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	128.778972152441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTCTAAGTAATCAGAC	14969477	True	NA	NA	False	CATAAA	-19	NA	14975079	15029805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877
transcript_35152.nic	chr16	+	1269	12	ISM	ENSG00000179889.20	ENST00000455313.6	2183	14	-26	6999	23	5419	5prime_fragment	FALSE	canonical	3	25	junction_6	139.736351511997	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTGAATGATTTTAG	14975028	False	NA	9	True	AATATA	-18	NA	14975053	15022806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_35157.nnic	chr16	+	666	3	NNC	ENSG00000179889.20	novel	283	3	NA	NA	2	-20632	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAATTGTGTTCATTAT	14969488	True	NA	NA	False	NA	NA	NA	14975090	14977730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_14975221_14976199_14976306_14977300
transcript_35163.known	chr16	-	1210	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_9	107.490338354227	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	15056074	15037856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
transcript_35165.known	chr16	-	1043	9	FSM	ENSG00000157045.9	ENST00000565187.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	238.169057604047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTATTTTGGCAAAGGC	-15054947	True	NA	-30	True	NA	NA	NA	15056027	15037873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
transcript_35169.known	chr16	-	3706	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	37.6545948339738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTCAATTTCTGTTT	-15093760	True	NA	-22	True	AATAAA	-16	NA	15094272	15060032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_35173.known	chr16	-	2198	17	FSM	ENSG00000085721.13	ENST00000429751.6	2198	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_14	65.196817406987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAATATAGGCAGCA	-15093737	True	NA	NA	False	NA	NA	NA	15094249	15061427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15091314_15091372_15092508_15092615_15094144
transcript_35181.nic	chr16	-	785	3	ISM	ENSG00000085721.13	ENST00000564131.1	1001	10	-72	14439	-14	-14439	5prime_fragment	FALSE	canonical	3	289	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACTGATTCAGCATT	NA	False	NA	NA	False	TTTAAA	-30	NA	15094325	15090873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_15091372_15092508_15092615_15094144
transcript_35182.known	chr16	-	2128	19	FSM	ENSG00000085721.13	ENST00000563559.5	2128	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	71.0977417988004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTTTCAATTTCTGT	NA	False	NA	-24	True	AATAAA	-14	NA	15094311	15060034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15060174_15061788_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_35183.nnic	chr16	-	1552	8	NNC	ENSG00000183793.14	novel	1084	8	NA	NA	386	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	121.376627545363	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	-17	True	AATAAA	-21	NA	15377908	15363627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15377377
transcript_35184.known	chr16	+	2111	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	17.91758912354	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	NA	False	NA	9	True	ATTAAA	-37	NA	15434587	15588259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
transcript_35187.nic	chr16	+	1142	6	NIC	ENSG00000166780.11	novel	865	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	55.8261587430122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTTTTACTTTT	NA	False	NA	13	True	AATAAA	-23	NA	15434482	15587964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15587495
transcript_35188.nic	chr16	+	1437	6	NIC	ENSG00000166780.11	novel	2111	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	55.8261587430122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	NA	False	NA	9	True	ATTAAA	-37	NA	15434482	15588259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15587495
transcript_35191.known	chr16	+	3203	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	11.0227038425243	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	15648472	True	NA	18	True	AATAAA	-20	NA	15650244	15726353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
transcript_35193.known	chr16	-	646	6	FSM	ENSG00000133393.13	ENST00000573429.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	276.219477951863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTAAAATTGTATTAT	-15883703	True	NA	NA	False	NA	NA	NA	15888614	15867419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883021_15884007_15884206_15888557
transcript_35196.known	chr16	-	796	6	FSM	ENSG00000133393.13	ENST00000572415.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	275.967679266975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTACATTTGTGAATAAAA	-15883712	True	NA	-52	True	AAAACA	-13	NA	15888623	15867306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883049_15884007_15884206_15888557
transcript_35197.known	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	61.7353221421902	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-15883692	True	NA	-9	True	AATAAA	-17	NA	15888603	15865718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
transcript_35199.known	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	275.918264870032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-15883692	True	NA	35	True	AAAAAG	-21	NA	15888603	15867219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
transcript_3520.known	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	48.0578355271599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673265	True	NA	-1	True	AATAAA	-20	NA	44674462	44635237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
transcript_35200.known	chr16	-	851	4	FSM	ENSG00000133393.13	ENST00000573087.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	273.126751202115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGTAGTTTTTGTATT	-15883714	True	NA	NA	False	AAAACA	-16	NA	15888625	15867068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15884007_15884206_15888557
transcript_35201.known	chr16	-	530	4	FSM	ENSG00000133393.13	ENST00000575073.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	222.873656286845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTTTCTACAAAACAC	-15883714	True	NA	-83	True	NA	NA	NA	15888625	15867337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15879803_15879889_15884007_15884206_15888557
transcript_35207.known	chr16	-	714	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	16223467	16221186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_16221832_16223398
transcript_3521.known	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673280	True	NA	-1	True	AATAAA	-20	NA	44674477	44635237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44636458_44645359_44645465_44674330
transcript_35212.known	chr16	+	796	2	FSM	ENSG00000256340.9	ENST00000565118.2	813	2	0	17	0	-17	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	18571161	18573522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_18571312_18572876
transcript_3522.known	chr1	-	415	3	FSM	ENSG00000126106.14	ENST00000420706.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	55	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCTGCGCCTGTTGC	-44674369	False	NA	NA	False	GGGGCT	-36	NA	44674402	44654895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44655117_44660173_44660296_44674330
transcript_35220.known	chr16	-	589	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	5943.75957118052	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727114	True	NA	-33	True	AATAAA	-14	NA	18790362	18782967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
transcript_35226.known	chr16	-	2278	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	2796	junction_3	105.286276408656	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTCACTTTCTTTATA	-18748510	True	NA	-6	True	AATAAA	-16	NA	18801549	18791668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_35232.known	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	6031.56039097678	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-18727012	True	NA	-34	True	AATAAA	-13	NA	18790260	18782968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
transcript_35234.known	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	5500.24128448016	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-18727086	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
transcript_35235.known	chr16	-	525	5	FSM	ENSG00000134419.15	ENST00000563390.5	525	5	0	0	0	0	multi-exon	FALSE	canonical	3	6711	junction_4	3250.00025961537	11388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCGTTTTGAGCCTT	-18727135	True	NA	-21	True	AATAAA	-26	NA	18790383	18782955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790309
transcript_35236.known	chr16	-	481	5	FSM	ENSG00000134419.15	ENST00000569365.6	481	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5708.00862823454	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727086	True	NA	-33	True	AATAAA	-14	NA	18790334	18782967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788160_18788980_18789119_18790309
transcript_3524.known	chr1	-	2236	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673284	True	NA	NA	False	AATAAA	-17	NA	44674481	44653246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44655210_44660173_44660296_44674330
transcript_35242.known	chr16	-	948	5	FSM	ENSG00000170540.15	ENST00000563861.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1298.67759663436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGGCTACAGGAAGC	-18748508	True	NA	NA	False	NA	NA	NA	18801547	18792878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18793371_18794598_18794684_18797924_18798045_18798700_18798835_18801430
transcript_35244.known	chr16	-	418	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	5222.86168898069	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCACTTGGTCGTTTTG	-18727114	True	NA	-27	True	AATAAA	-20	NA	18790362	18782961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
transcript_35251.known	chr16	-	778	4	FSM	ENSG00000170540.15	ENST00000569976.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	2796	junction_1	131.251243380354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGCCTATAATCCCAGC	-18748509	True	NA	NA	False	AGTAAA	-44	NA	18801548	18795175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18795582_18797924_18798045_18798700_18798835_18801430
transcript_35254.known	chr16	-	427	5	FSM	ENSG00000134419.15	ENST00000562935.5	427	5	0	0	0	0	multi-exon	FALSE	canonical	2	134	junction_3	5658.42439973355	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727086	True	NA	-33	True	AATAAA	-14	NA	18790334	18782967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788106_18788980_18789119_18790309
transcript_35255.known	chr16	-	606	2	FSM	ENSG00000134419.15	ENST00000573554.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	6711	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGCCTGGGCGACAG	-18727092	True	NA	NA	False	NA	NA	NA	18790340	18788543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18789119_18790309
transcript_35256.known	chr16	+	2642	6	FSM	ENSG00000167186.11	ENST00000321998.10	2642	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.319217855735	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGATCTGCTCTTTAA	19066895	True	NA	6	True	AATAAA	-22	NA	19067613	19080095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_35257.known	chr16	+	2546	5	FSM	ENSG00000261210.8	ENST00000636231.2	2546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTTTTATTTTTATT	NA	False	NA	NA	False	GATAAA	-11	NA	19285730	19310947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19285940_19298672_19298839_19304061_19304156_19307544_19307678_19309003
transcript_35258.known	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	80.1947629212781	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-19515480	True	NA	NA	False	NA	NA	NA	19522123	19502382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
transcript_35265.known	chr16	+	3606	31	FSM	ENSG00000103544.16	ENST00000417362.7	3606	31	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	43.0751926544992	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCTCCAGAAGAGAAAGA	19551495	True	NA	62	True	NA	NA	NA	19555702	19701163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
transcript_35269.known	chr16	+	3482	10	FSM	ENSG00000174628.16	ENST00000320394.10	3482	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.0748693216864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGAATTGCTCCATCGT	NA	False	NA	NA	False	AATAAA	-17	NA	19716455	19858467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19716543_19717694_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_35273.known	chr16	+	946	8	FSM	ENSG00000174628.16	ENST00000561839.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	12.0796675180627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTCACTTTCTGCAT	19717755	True	NA	NA	False	AAGAAA	-4	NA	19718314	19856736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_35274.known	chr16	+	2423	8	FSM	ENSG00000174628.16	ENST00000308214.13	2423	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9412185537867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	NA	False	NA	5	True	AATAAA	-20	NA	19716455	19857539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19716543_19717694_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19788837_19788923_19827025_19827138_19856486
transcript_35278.known	chr16	+	473	3	FSM	ENSG00000174628.16	ENST00000566312.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATACTTTGATTTTACA	19717856	False	NA	NA	False	AATAAA	-17	NA	19718415	19734033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19718488_19730429_19730495_19733697
transcript_3528.known	chr1	-	2075	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673245	True	NA	NA	False	AATAAA	-17	NA	44674442	44653246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44655210_44674330
transcript_35288.known	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	105.411099984774	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-19704746	True	NA	-7	True	AATAAA	-30	NA	19718227	19701936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
transcript_35294.nic	chr16	-	1934	4	NIC	ENSG00000103550.14	novel	6422	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	421.529226612923	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGCAGGGTGTTGTAC	-19704746	True	NA	-30	True	AATAAA	-23	NA	19718227	19706355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_19707222_19710508_19710587_19714117_19715038_19718157
transcript_35297.nic	chr16	-	944	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	8	3904	0	635	5prime_fragment	FALSE	canonical	3	836	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAGGAAAGAGAGTG	-19704746	True	NA	15	True	AAGAAA	-3	NA	19718227	19714163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_35299.nic	chr16	-	966	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-234	4124	-234	415	5prime_fragment	FALSE	canonical	3	836	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGGAGGGAGATGCC	-19718415	True	NA	18	True	AAGAAA	-8	NA	19718469	19714383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_3530.known	chr1	-	117	1	FSM	ENSG00000199377.1	ENST00000362507.1	117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTCTGTTACTAAAGA	-44720493	False	1409	47	True	NA	NA	NA	44721902	44721785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44721800_44721900
transcript_35300.nic	chr16	-	769	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-234	4321	-234	218	5prime_fragment	FALSE	canonical	3	836	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAAAAGGGGGCCC	-19718415	True	NA	NA	False	AAAACA	-4	NA	19718469	19714580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_35302.known	chr16	-	5144	4	FSM	ENSG00000167191.12	ENST00000300571.7	5144	4	0	0	0	0	multi-exon	FALSE	canonical	3	956	junction_2	12.5698050899765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTTGTACAGAAAAG	-19875698	True	NA	55	True	ATTAAA	-17	NA	19884848	19856690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19884726
transcript_35303.known	chr16	-	2078	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	-19862326	False	NA	-33	True	AATAAA	-19	NA	19862340	19858970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19860545_19861836
transcript_35306.known	chr16	+	2533	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	6.68655809603099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	20763782	True	NA	NA	False	AATAAA	-17	NA	20764013	20797581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_35309.known	chr16	+	1517	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	3.57071421427143	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCTTCTTGGTCTCCA	20763808	True	NA	16	True	TATAAA	-21	NA	20764039	20786314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
transcript_3531.known	chr1	+	2862	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_3	56.9706942208009	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	44735394	True	NA	29	True	AATAAA	-37	NA	44739836	44767767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
transcript_35310.nic	chr16	+	2260	8	ISM	ENSG00000005187.12	ENST00000440284.6	1517	9	-41	268	-15	-106	5prime_fragment	FALSE	canonical	2	18	junction_4	3.73073281634303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCTTACTTTTTCTTC	20763767	True	NA	NA	False	AATAAA	-18	NA	20763998	20786046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983
transcript_35311.known	chr16	-	4122	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	106.175267835782	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	NA	False	NA	-13	True	AATAAA	-16	NA	20742084	20733663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
transcript_35315.known	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	31.4430702487315	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-20734917	True	NA	-13	True	AATAAA	-16	NA	20741818	20733663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
transcript_35318.known	chr16	-	2903	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	24.7421268185694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	-20806655	False	NA	NA	False	NA	NA	NA	20806676	20797373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_35319.nic	chr16	-	2859	10	NIC	ENSG00000196678.14	novel	2903	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	20	junction_9	28.2283457923563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-20805485	True	NA	-6	True	AATAAA	-17	NA	20806458	20796343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_35320.known	chr16	-	3502	9	FSM	ENSG00000196678.14	ENST00000357967.9	3502	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	21.8288799529431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-20805499	True	NA	-2	True	AATAAA	-21	NA	20806472	20796339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_35321.known	chr16	-	2646	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	26.6103245940368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-20805503	True	NA	-6	True	AATAAA	-17	NA	20806476	20796343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_35322.known	chr16	+	2691	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	10.6879692636445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805708	True	NA	11	True	AATAAA	-20	NA	20806526	20849665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_35323.known	chr16	+	2604	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.998100525998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805702	True	NA	11	True	AATAAA	-20	NA	20806520	20849665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_35329.known	chr16	+	857	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.0834470212676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCCTAGAGTTTCTCA	20899874	True	NA	NA	False	NA	NA	NA	20899901	20924263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
transcript_35331.known	chr16	+	1626	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	52.8695328142778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	20900521	False	NA	15	True	AATAAA	-15	NA	20900752	20925004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_35332.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	54.1623075169029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCGGAAGGATGTAAG	20900434	False	NA	NA	False	NA	NA	NA	20900665	20924381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
transcript_35333.known	chr16	+	1378	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	41.7212975189731	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	20899663	True	NA	17	True	AATAAA	-17	NA	20900770	20925006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
transcript_35337.known	chr16	-	6136	3	FSM	ENSG00000188215.10	ENST00000324344.9	6136	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGATATTTCTACAAAAA	-20897725	True	NA	-6	True	AATAAA	-15	NA	20900358	20854924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20860370_20862107_20862644_20900203
transcript_35344.known	chr16	+	1812	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	9.3407708461347	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	21156612	True	NA	23	True	AATAAA	-20	NA	21158678	21180609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
transcript_35347.known	chr16	+	1717	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	23.8890665368072	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	21156607	True	NA	30	True	AATAAA	-27	NA	21158673	21180616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_35350.known	chr16	+	584	4	FSM	ENSG00000011638.11	ENST00000572258.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	34.4995974211616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGATTATGGCTTAGA	21156594	True	NA	NA	False	NA	NA	NA	21158660	21179609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21179474
transcript_35353.known	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	234.273744794418	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	21585398	True	NA	NA	False	NA	NA	NA	21599557	21656119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
transcript_35361.nnic	chr16	-	1402	8	NIC	ENSG00000248124.9	novel	1178	8	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	49.9824458981269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21819048	True	NA	NA	False	AATAAA	-20	NA	21820468	21810426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
transcript_35362.known	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	3	45	junction_2	45.0219900919177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21818990	True	NA	NA	False	AATAAA	-20	NA	21820410	21810426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
transcript_35366.nic	chr16	-	1029	7	FSM	ENSG00000248124.9	ENST00000692968.1	1001	7	-31	3	-27	0	multi-exon	FALSE	canonical	3	29	junction_6	53.9557431810759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21819048	True	NA	NA	False	AATAAA	-20	NA	21820468	21810426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21820294
transcript_35368.nic	chr16	-	782	7	FSM	ENSG00000248124.9	ENST00000692968.1	1001	7	-31	250	-27	-247	multi-exon	FALSE	canonical	3	29	junction_6	53.9557431810759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCATTTTTTTTTTTGT	-21819048	True	NA	NA	False	ATTAAA	-13	NA	21820468	21810673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21820294
transcript_35369.nic	chr16	-	498	2	ISM	ENSG00000248124.9	ENST00000551681.2	1178	8	-31	8731	-27	-8731	5prime_fragment	FALSE	canonical	3	124	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCACGTAGAGATTTG	-21819048	True	NA	NA	False	NA	NA	NA	21820468	21819157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_21819482_21820294
transcript_35375.known	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_9	47.4736924968971	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	21938736	True	NA	58	True	AATAAA	-38	NA	21953360	21983660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
transcript_35390.known	chr16	+	535	5	FSM	ENSG00000140740.11	ENST00000630839.2	535	5	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_4	456.544836242838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATCTCCTCATCTGTT	21953241	False	NA	NA	False	AAGAAA	-24	NA	21953287	21959405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21959338
transcript_35391.known	chr16	+	4469	3	FSM	ENSG00000185716.12	ENST00000542527.7	4469	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTGAAAT	22007534	True	NA	NA	False	AATAAA	-24	NA	22008110	22084654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22008408_22075486_22075700_22080695
transcript_35393.known	chr16	+	3690	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	27.5664651342895	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	22293567	True	NA	3	True	AGTAAA	-15	NA	22297408	22335096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_35396.known	chr16	+	2469	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_19	39.4158172336874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	22293591	True	NA	17	True	AATAAA	-36	NA	22297432	22334025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
transcript_35397.known	chr16	+	3655	20	FSM	ENSG00000058600.16	ENST00000615879.4	3655	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.9673075430063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTCTCAGCTTTTCCA	22293533	True	NA	8	True	AGTAAA	-20	NA	22297374	22335101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22297538_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_35400.known	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	9.98436277385793	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-22371292	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
transcript_35401.nnic	chr16	-	751	3	Antisense	novelGene_ENSG00000122254.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCCCTGTTGTTTTGTA	-22860237	True	NA	NA	False	AATAAA	-13	NA	22860273	22846976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_-_22847397_22850938_22851184_22860187
transcript_35404.nnic	chr16	+	2591	13	NNC	ENSG00000168447.11	novel	1852	12	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	7.22841614740048	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23301369	True	NA	7	True	AATAAA	-16	NA	23301764	23381294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23301932_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23371775_23371884_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
transcript_35405.nnic	chr16	+	930	3	NNC	ENSG00000168447.11	novel	560	2	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	4.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGACTCCTTTGGTATA	23301369	True	NA	10	True	AATAGA	-17	NA	23301764	23353244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23301932_23348591_23348911_23352800
transcript_35406.known	chr16	-	2935	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	12.5597011807606	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-23451607	True	NA	-1	True	AATAAA	-20	NA	23453189	23388492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
transcript_35408.known	chr16	+	730	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	23452458	True	NA	-7	True	NA	NA	NA	23452757	23457588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23453266_23455469_23455531_23457427
transcript_35409.known	chr16	+	579	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	23452707	False	NA	10	True	AATAAA	-33	NA	23453006	23455789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23453266_23455469
transcript_35410.known	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	23452707	False	NA	11	True	CATAAA	-16	NA	23453006	23457606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23453266_23457427
transcript_35411.known	chr16	-	5973	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_14	29.7352247973679	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTCGTCTTTTTT	-23499638	True	NA	-5	True	AATAAA	-15	NA	23510494	23463541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
transcript_35415.known	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_6	10.2522863303753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-23551447	True	NA	-1	True	AATAAA	-37	NA	23557350	23520753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_35417.nic	chr16	+	996	6	ISM	ENSG00000103353.16	ENST00000395878.8	4745	7	400	3531	360	0	3prime_fragment	FALSE	canonical	3	535	junction_4	25.4133823014568	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTGTGTGGAATACT	23558109	True	NA	4	True	AATAAA	-12	NA	23558126	23570858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23566986_23567070_23570479
transcript_35418.known	chr16	+	1024	1	FSM	ENSG00000260751.2	ENST00000568262.2	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGCCCCACTGTCTT	NA	False	NA	10	True	AATAAA	-23	NA	23568672	23569696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23568700_23569700
transcript_35419.known	chr16	-	599	1	FSM	ENSG00000103356.18	ENST00000564759.1	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACATCGTGGCTTC	-23523635	False	NA	-30	True	AAGAAA	-28	NA	23523645	23523046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23523000_23523600
transcript_3542.known	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4948.02006463191	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759519	True	NA	52	True	AATATA	-21	NA	44775572	44778779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
transcript_35422.known	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	4011	junction_2	148.150261559	3037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572507	True	NA	-25	True	AATAAA	-14	NA	23596316	23581013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
transcript_35424.known	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	1925.93013603528	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572468	True	NA	-25	True	AATAAA	-14	NA	23596277	23581013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
transcript_35425.known	chr16	-	885	4	FSM	ENSG00000004779.10	ENST00000570319.5	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	4011	junction_1	167.921277852318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACACCCAAGTTTATT	-23572482	True	NA	NA	False	NA	NA	NA	23596291	23581870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23582376_23585335_23585424_23587196_23587320_23596122
transcript_35427.known	chr16	-	4008	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	35.8817502360183	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTGGCATGTTATTG	-23638857	True	NA	-5	True	AATAAA	-17	NA	23641310	23603164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
transcript_35430.nnic	chr16	+	1470	7	NNC	ENSG00000166847.10	novel	10954	6	NA	NA	-2	-12	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	119.007586126077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCTGGAACTGCTT	23633909	True	NA	26	True	AATAAA	-18	NA	23641468	23669860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046_23667574_23669442
transcript_35432.known	chr16	+	878	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	131.825035558501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAACAGTCACTTTG	23633911	True	NA	100	True	NA	NA	NA	23641470	23667371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
transcript_35433.known	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	TRUE	canonical	3	301	junction_5	22.3571017799714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	23633906	True	NA	19	True	AATAAA	-31	NA	23641465	23677472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
transcript_35436.known	chr16	+	523	3	FSM	ENSG00000166847.10	ENST00000568272.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	166.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTTTGCAAGTATAGT	23633969	True	NA	NA	False	AATAAA	-29	NA	23641528	23651147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23641591_23642954_23643024_23650755
transcript_35437.known	chr16	+	3405	1	FSM	ENSG00000166847.10	ENST00000563614.1	3405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTTCCTTTTTGTTTT	23666454	False	NA	38	True	AATAAA	-30	NA	23666467	23669872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23666500_23669900
transcript_35439.known	chr16	+	2160	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	0	0	0	0	multi-exon	TRUE	canonical	3	1840	junction_4	147.424640719786	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	23656622	True	NA	61	True	ATTAAA	-16	NA	23678888	23690367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_35451.known	chr16	-	759	5	FSM	ENSG00000134398.15	ENST00000562458.2	759	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.34520787991171	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAATTTGTAAAATTAG	-23694713	False	NA	NA	False	NA	NA	NA	23694760	23690637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23694727
transcript_35452.known	chr16	+	1967	7	FSM	ENSG00000166869.3	ENST00000300113.3	1967	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.42216638714053	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTGTGAATGCATTCG	23754759	False	NA	8	True	AATAAA	-15	NA	23755025	23758935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23755117_23755660_23755734_23755846_23755928_23756062_23756194_23756387_23756450_23757200_23757324_23757529
transcript_35453.known	chr16	+	8010	17	FSM	ENSG00000166501.14	ENST00000643927.1	8010	17	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	8.78830899547803	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTTATATGTCTTT	23835046	True	NA	NA	False	ATTAAA	-19	NA	23835982	24220611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23836349_23837374_23837407_23988507_23988591_24032135_24032248_24035418_24035548_24092790_24092948_24094162_24094298_24112972_24113070_24123834_24123982_24154683_24154858_24172269_24172362_24174517_24174581_24180789_24180929_24185110_24185192_24185459_24185568_24191089_24191231_24214657
transcript_35454.nic	chr16	+	1184	9	NIC	ENSG00000122257.20	novel	6858	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	52.1019133525824	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	24535023	True	NA	34	True	AATAAA	-36	NA	24539565	24559805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_24539760_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_35458.known	chr16	+	454	3	FSM	ENSG00000090905.19	ENST00000566108.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	24610050	True	NA	NA	False	AAAAAG	-7	NA	24610208	24750777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_24610485_24640883_24641010_24750725
transcript_35459.nic	chr16	+	248	3	ISM	ENSG00000090905.19	ENST00000315183.11	8303	24	-3	75451	-3	-7	5prime_fragment	FALSE	canonical	3	128	junction_2	16.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGACGACAAGAAAA	24723229	True	NA	NA	False	AAGAAA	-8	NA	24729691	24750770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_24729847_24730252_24730301_24750725
transcript_35461.known	chr16	-	1292	3	FSM	ENSG00000140750.17	ENST00000571843.1	1292	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-24931137	False	NA	-25	True	ATTAAA	-19	NA	24931160	24919394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_24920261_24927683_24927733_24930783
transcript_35462.known	chr16	+	1032	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGCGGTGTCATTAGAGT	25031492	True	NA	11	True	ATTAAA	-24	NA	25031743	25032775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25031700_25032800
transcript_35464.known	chr16	-	432	3	FSM	ENSG00000260448.7	ENST00000563176.2	561	3	41	88	41	-88	multi-exon	FALSE	canonical	1	2	junction_1	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGAGCAACAGAGGGA	-25111340	False	NA	NA	False	NA	NA	NA	25111414	25100563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_25100686_25103350_25103642_25111395
transcript_35465.known	chr16	-	534	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATTTGCTTAGTGAAT	-25106926	True	NA	0	True	AATAAA	-18	NA	25107102	25106568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_25106600_25107100
transcript_35468.known	chr16	+	1529	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	294.230078073224	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	25103826	True	NA	31	True	AATAAA	-19	NA	25111730	25178231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_3547.known	chr1	+	778	6	FSM	ENSG00000142937.12	ENST00000396651.8	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	8257	junction_1	1976.66988645044	10035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759486	True	NA	52	True	AATATA	-21	NA	44775539	44778779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_35473.known	chr16	+	1352	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.314029613721	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103837	True	NA	28	True	AATAAA	-16	NA	25111741	25178228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_35475.nic	chr16	+	1156	11	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	267.088842896891	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103805	True	NA	28	True	AATAAA	-16	NA	25111709	25178228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_25111769_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_35483.nnic	chr16	+	1263	10	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	78	junction_1	218.601333961796	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103834	True	NA	28	True	AATAAA	-16	NA	25111738	25178228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_25111997_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_35488.known	chr16	+	1168	9	FSM	ENSG00000205629.12	ENST00000564011.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.429692843396	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGTTTAAATAAATCTCA	25103830	True	NA	-2	True	NA	NA	NA	25111734	25178198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_35499.known	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.58034844053754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	27202901	True	NA	24	True	AATAGA	-20	NA	27203525	27221768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_35502.nnic	chr16	+	2162	6	NIC	ENSG00000155666.12	novel	2431	8	NA	NA	-13	0	intron_retention	FALSE	canonical	1	1	junction_2	12.537942414926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	27202870	True	NA	24	True	AATAGA	-20	NA	27203494	27221768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_27203637_27210092_27210622_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_35509.known	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	37.2766819930122	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-27267309	True	NA	-3	True	AATAAA	-22	NA	27268772	27224993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_35511.nic	chr16	-	937	7	NIC	ENSG00000169189.17	novel	1042	8	NA	NA	-22	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	96.0410791739081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCAGCCCGTCTGTGTTC	-27267331	True	NA	-9	True	AATAAA	-16	NA	27268794	27224999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_27225237_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_35515.known	chr16	+	3539	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	22.432339970302	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311886	True	NA	29	True	AATAAA	-18	NA	27313925	27364778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_35522.nic	chr16	+	682	5	ISM	ENSG00000047578.14	ENST00000261588.10	6599	28	-11	148946	0	144	5prime_fragment	FALSE	canonical	3	19	junction_1	6.98212002188447	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGCAGCACGTA	27548883	True	NA	NA	False	AATAAA	-13	NA	27550132	27631398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064
transcript_35523.known	chr16	-	1329	7	FSM	ENSG00000198156.10	ENST00000533640.5	1329	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.14862224856557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	-28356580	True	NA	NA	False	AAAAAG	-41	NA	28356654	28342554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28356535
transcript_35525.nic	chr16	-	435	2	ISM	ENSG00000198156.10	ENST00000533640.5	1329	7	-66	10257	-66	-10257	5prime_fragment	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28356720	28352811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_28353062_28356535
transcript_35526.known	chr16	-	2913	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	0	0	0	multi-exon	TRUE	canonical	3	2016	junction_13	408.871018782207	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-28403679	True	NA	NA	False	ACTAAA	-16	NA	28403841	28379714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_35533.known	chr16	-	1685	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	44.538921805041	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-28490849	True	NA	-7	True	AATAAA	-20	NA	28492074	28477278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_35534.known	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_13	30.53143244833	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-28490849	True	NA	0	True	AATAAA	-27	NA	28492074	28477271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_35535.known	chr16	-	1452	15	FSM	ENSG00000188603.22	ENST00000567963.6	1452	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	56.8205194324324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTGTGCTCCCAGC	-28490849	True	NA	NA	False	NA	NA	NA	28492074	28477432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713_28491836_28492019
transcript_35536.known	chr16	-	1841	15	FSM	ENSG00000188603.22	ENST00000360019.8	1841	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	63.2788209725297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	NA	False	NA	-7	True	AATAAA	-20	NA	28492302	28477278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_35542.known	chr16	-	1720	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	47.7914602061817	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATATCGTTTTTGT	-28490780	True	NA	-8	True	AATAAA	-19	NA	28492005	28477279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_35546.known	chr16	-	1536	14	FSM	ENSG00000188603.22	ENST00000636172.1	1536	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	55.5647710962823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	-28490833	True	NA	NA	False	GGGGCT	-44	NA	28492058	28477515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_35548.known	chr16	-	1173	14	FSM	ENSG00000188603.22	ENST00000355477.10	1173	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	56.8143452174291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	-28491740	False	1225	NA	False	GGGGCT	-44	NA	28491759	28477515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_35553.known	chr16	-	1577	13	FSM	ENSG00000188603.22	ENST00000637578.1	1577	13	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	68.151944212913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCCAGCCATTGTCTC	-28490798	True	NA	-89	True	NA	NA	NA	28492023	28477360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_35556.known	chr16	-	1224	13	FSM	ENSG00000188603.22	ENST00000636228.1	1224	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	68.4110838160666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGGCAGAGGGACAGG	-28491837	False	NA	NA	False	NA	NA	NA	28491856	28477482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_35562.known	chr16	-	1968	13	FSM	ENSG00000188603.22	ENST00000568076.6	1968	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	48.2760436333477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATCCATGGACTTCT	-28490845	True	NA	-22	True	AATAAA	-5	NA	28492070	28477293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_35564.known	chr16	-	1469	12	FSM	ENSG00000188603.22	ENST00000357806.11	1469	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	75.5301920913443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-28490758	True	NA	-19	True	AATAAA	-8	NA	28491983	28477290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_35568.known	chr16	-	1430	11	FSM	ENSG00000188603.22	ENST00000395653.9	1430	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	86.5230605099011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-28490798	True	NA	-19	True	AATAAA	-8	NA	28492023	28477290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_35571.known	chr16	-	1183	10	FSM	ENSG00000188603.22	ENST00000628023.3	1183	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.4703409920259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACAGGTCAGACACCCA	-28490811	True	NA	NA	False	NA	NA	NA	28492036	28477471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28489289_28489387_28491481_28491561_28491713
transcript_35575.known	chr16	-	1406	7	FSM	ENSG00000233232.7	ENST00000452313.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.45905169363301	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	-28470535	False	NA	NA	False	AAAAAG	-41	NA	28470547	28456371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28457027_28458385_28458422_28458530_28458592_28462673_28462870_28462981_28463082_28466719_28466903_28470372
transcript_35580.known	chr16	+	1159	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	9.76134983582107	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552564	True	NA	5	True	ATTAAA	-16	NA	28553919	28591790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_35582.nic	chr16	+	1820	9	ISM	ENSG00000176476.9	ENST00000317058.8	1159	10	-7	0	-2	0	intron_retention	FALSE	canonical	3	92	junction_1	9.75881012214092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552557	True	NA	5	True	ATTAAA	-16	NA	28553912	28591790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772
transcript_35584.nic	chr16	+	1236	9	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	-2	0	intron_retention	TRUE	canonical	3	92	junction_1	10.3531396204243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552557	True	NA	5	True	ATTAAA	-16	NA	28553912	28591790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590443_28590630_28590667_28590772_28590936_28591589
transcript_35586.known	chr16	-	1031	8	FSM	ENSG00000197165.11	ENST00000335715.9	1031	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.55492059863531	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	-28596979	True	NA	0	True	AATAAA	-18	NA	28597050	28591942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28592141_28592262_28592444_28593251_28593347_28593441_28593569_28595366_28595465_28595549_28595676_28595782_28595935_28596996
transcript_35587.known	chr16	-	1162	8	FSM	ENSG00000196502.13	ENST00000314752.12	1569	8	37	370	-17	0	multi-exon	FALSE	canonical	3	16	junction_2	13.2541868625637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	-28609761	True	NA	-24	True	NA	NA	NA	28610007	28605627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930
transcript_35588.known	chr16	-	939	8	FSM	ENSG00000196502.13	ENST00000566189.5	939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	18.7290018475113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGGCAGGCTGCAGC	-28609744	True	NA	NA	False	NA	NA	NA	28609990	28605864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608891_28609930
transcript_35590.known	chr16	-	5291	3	FSM	ENSG00000176046.9	ENST00000324873.8	5291	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTCAATTACTCCTC	-28538943	True	NA	NA	False	AATGAA	-21	NA	28538974	28532707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28537670_28538005_28538156_28538795
transcript_35592.known	chr16	-	432	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTGCTGCTTGCTGG	-28553941	True	NA	1	True	AATAAA	-28	NA	28554140	28553708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28553700_28554100
transcript_35595.known	chr16	+	2910	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	321.704041006637	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	28709627	True	NA	NA	False	ACTAAA	-16	NA	28711463	28735596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_35598.known	chr16	+	3137	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	651.676336458521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711416	28735727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_35609.known	chr16	+	3128	21	FSM	ENSG00000184110.15	ENST00000566501.5	3128	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	687.149976351597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGATTGCTTGTTGC	NA	False	NA	NA	False	ACTAAA	-18	NA	28688557	28735598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28688829_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_35610.known	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	2418	junction_7	300.301667349255	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	28709690	True	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_35617.known	chr16	+	1294	9	FSM	ENSG00000168488.19	ENST00000568266.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	121.794909581641	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGTGGTATCAATGG	28822214	False	NA	NA	False	NA	NA	NA	28824137	28830768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614
transcript_3562.known	chr1	+	898	3	FSM	ENSG00000142937.12	ENST00000464658.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	12837	junction_1	144	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44775449	False	NA	52	True	AATATA	-21	NA	44777225	44778779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44777790_44777999_44778130_44778575
transcript_35626.known	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_5	125.839403827083	2265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	-28813612	True	NA	-11	True	AATAAA	-16	NA	28846348	28842410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
transcript_3564.known	chr1	-	1900	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	64.0273701805049	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-44980781	True	NA	NA	False	NA	NA	NA	44986595	44850521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_35653.known	chr16	-	2307	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	10.8892786211433	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-28924591	True	NA	-6	True	AATAAA	-17	NA	28925238	28904420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_35655.nic	chr16	-	2268	12	ISM	ENSG00000177548.13	ENST00000358201.9	2307	13	526	0	-1	0	3prime_fragment	TRUE	canonical	3	66	junction_4	10.4050210384178	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-28924064	True	NA	-6	True	AATAAA	-17	NA	28924712	28904420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402
transcript_35659.nic	chr16	+	1042	8	ISM	ENSG00000177455.15	ENST00000538922.8	1918	15	4814	0	-14	0	3prime_fragment	FALSE	canonical	2	9	junction_5	1.92724822331886	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAAGTAGTGCCATT	28936742	True	NA	38	True	AATAAA	-19	NA	28936784	28939342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_28937137_28937270_28937376_28937454_28937524_28937623_28937681_28937768_28937826_28938675_28938769_28938871_28938979_28939140
transcript_3566.known	chr1	-	1923	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	127.266020602516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-44980908	True	NA	NA	False	NA	NA	NA	44986722	44850521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_35661.nnic	chr16	-	490	3	NIC	ENSG00000260442.6	novel	437	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878203	True	NA	-7	True	ATTAAA	-19	NA	28879938	28878956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_28879108_28879488_28879756_28879866
transcript_35662.nnic	chr16	-	437	3	FSM	ENSG00000260442.6	ENST00000686287.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	28.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878203	True	NA	-7	True	ATTAAA	-19	NA	28879938	28878956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28879108_28879541_28879756_28879866
transcript_35663.known	chr16	-	558	2	FSM	ENSG00000260442.6	ENST00000561547.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878160	True	NA	-7	True	ATTAAA	-19	NA	28879895	28878956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28879108_28879488
transcript_35664.known	chr16	-	530	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	0	16	0	multi-exon	FALSE	canonical	3	50	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878185	True	NA	-7	True	ATTAAA	-19	NA	28879920	28878956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28879108_28879541
transcript_35666.known	chr16	+	4569	8	FSM	ENSG00000176953.13	ENST00000320805.9	4564	8	0	-5	0	5	multi-exon	FALSE	canonical	3	186	junction_3	20.4759689910502	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGGAGGATTTTTGT	28950904	False	NA	8	True	AATAAA	-21	NA	28950936	28967097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28951399_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_35670.known	chr16	+	2102	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	150.148445065394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970145	True	NA	13	True	AATAAA	-14	NA	28974793	28984543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35671.known	chr16	+	1979	13	FSM	ENSG00000169682.18	ENST00000565975.5	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	136.421808088818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCCTGCTCTCGTCTTTC	28970123	True	NA	18	True	AATAAA	-19	NA	28974771	28984548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35672.nic	chr16	+	2119	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	153.940171459203	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970129	True	NA	10	True	AATAAA	-11	NA	28974777	28984540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35674.nic	chr16	+	1964	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	204.391497615534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970124	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35676.known	chr16	+	2205	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	64.2088534355203	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970129	True	NA	13	True	AATAAA	-14	NA	28974777	28984543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35678.nic	chr16	+	1982	12	NIC	ENSG00000169682.18	novel	2205	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	218.410486231471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970129	True	NA	10	True	AATAAA	-11	NA	28974777	28984540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35681.nic	chr16	+	2070	11	NIC	ENSG00000169682.18	novel	2205	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	6	junction_2	181.17695769606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970124	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28975393_28975491_28975558_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_35687.known	chr16	+	2253	5	FSM	ENSG00000169682.18	ENST00000568900.5	2253	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	39.350984739902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACAAAAAAAAATTA	28970129	True	NA	NA	False	NA	NA	NA	28974777	28980687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404
transcript_357.known	chr1	-	2114	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_10	44.9576189316116	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-1318737	True	NA	-17	True	AGTAAA	-15	NA	1324660	1311599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_35700.known	chr16	+	762	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	237.075278129121	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	29454561	29458219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
transcript_35703.known	chr16	-	937	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	1062.21066648759	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTGATAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	29454347	29443229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
transcript_35705.known	chr16	-	1305	5	FSM	ENSG00000261740.7	ENST00000568556.2	1305	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	1069.69537135579	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGCCATTATATTTA	NA	False	NA	NA	False	AATAAA	-14	NA	29454651	29443269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29454015_29454114_29454190
transcript_35708.known	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2524	junction_1	158.5	856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29453733_29454015_29454114_29454190
transcript_35709.known	chr16	+	418	1	FSM	ENSG00000279228.2	ENST00000624430.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	NA	False	NA	NA	False	AATAAA	-15	NA	29467160	29467578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29467200_29467600
transcript_35718.known	chr16	+	913	3	FSM	ENSG00000103485.19	ENST00000219771.7	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	532	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGACCAGCCTGG	29667607	True	NA	NA	False	NA	NA	NA	29679007	29697776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29679211_29696995_29697128_29697198
transcript_35720.known	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	116.121583791396	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	29667779	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
transcript_35727.known	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	TRUE	canonical	3	1578	junction_8	90.1627719393486	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770461	True	NA	24	True	AATACA	-15	NA	29790750	29805384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_3574.known	chr1	-	1457	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	22.4785219847143	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAAAAACTTTACTAGG	-44980773	True	NA	-5	True	AATAAA	-21	NA	44986587	44874526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_35762.known	chr16	+	2698	6	FSM	ENSG00000103495.15	ENST00000219782.10	2698	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	410.895899225096	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCTGGATTGAAT	29799488	False	NA	11	True	AATAAA	-18	NA	29806595	29811164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29809539_29809765_29810076
transcript_35763.known	chr16	+	672	4	FSM	ENSG00000103495.15	ENST00000561855.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	446.534059917792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGTCCCTTGGTACAA	29799540	False	NA	NA	False	NA	NA	NA	29806647	29810266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29806894_29808229_29808294_29808569_29808742_29810076
transcript_35769.known	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_2	239	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	29807265	True	NA	-28	True	NA	NA	NA	29808050	29811125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29808294_29808569_29808742_29810076
transcript_35770.known	chr16	+	1593	4	FSM	ENSG00000103495.15	ENST00000568282.1	1593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	468.865533910191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACCCCATTACAATAAAT	29807360	False	NA	-25	True	NA	NA	NA	29808145	29811128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29808294_29808569_29808742_29809539_29809772_29810087
transcript_35771.known	chr16	+	2867	2	FSM	ENSG00000167371.21	ENST00000647876.1	2867	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTACAACGCGGTTCGGA	29812136	False	NA	-28	True	NA	NA	NA	29812149	29815682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29812324_29812989
transcript_35772.known	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	29810524	True	NA	5	True	AATAAA	-16	NA	29812240	29815880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29812352_29812989
transcript_35773.known	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	22	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	29813323	True	NA	19	True	NA	NA	NA	29816151	29822489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29817008_29817209_29817293_29819554
transcript_35774.known	chr16	+	2798	15	FSM	ENSG00000013364.19	ENST00000357402.10	2798	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.37974369781684	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAATTTCAACACTTTT	29820451	False	NA	10	True	AATACA	-18	NA	29820461	29848021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29820511_29830514_29830675_29830877_29831074_29833732_29833857_29833934_29834067_29835703_29835799_29836721_29836959_29840177_29840460_29841595_29841841_29841914_29842113_29844492_29844880_29845862_29845980_29846157_29846285_29847196_29847386_29847761
transcript_35775.known	chr16	-	1843	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	32.124756808418	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGAGTGTGG	-29857599	True	NA	-11	True	AATAAA	-18	NA	29863226	29858356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_35776.known	chr16	+	729	6	FSM	ENSG00000214725.9	ENST00000565014.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGTTTCTCTGGGG	29863548	False	NA	8	True	AATAAA	-21	NA	29863592	29868053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
transcript_35777.nnic	chr16	+	596	6	NNC	ENSG00000214725.9	novel	729	6	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2.0591260281974	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	29863611	True	NA	3	True	AATAAA	-16	NA	29863682	29868048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865393_29865443_29867863
transcript_35780.known	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_12	63.5101822749326	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	NA	False	NA	-11	True	AATAAA	-21	NA	29899550	29871158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_35784.known	chr16	-	3015	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	87.154422339508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	-29897534	False	1530	-11	True	AATAAA	-21	NA	29899064	29871158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
transcript_3579.nic	chr1	-	766	5	ISM	ENSG00000070785.17	ENST00000372183.7	1457	10	-8	52013	0	88	5prime_fragment	FALSE	canonical	3	431	junction_1	8.8423695919137	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACTATACTGTGTGAAA	-44980781	True	NA	NA	False	AATAAA	-34	NA	44986595	44926539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_35791.known	chr16	+	1732	5	FSM	ENSG00000174939.11	ENST00000566693.1	1732	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	41.3906692383682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29900836	False	NA	76	True	AATAAA	-17	NA	29900857	29919864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
transcript_35793.known	chr16	+	775	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	26.6624996744283	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	29898526	True	NA	NA	False	GGGGCT	-33	NA	29900374	29905887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
transcript_35795.nnic	chr16	+	1021	4	NIC	ENSG00000174939.11	novel	1732	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	37.9326889224701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29898514	True	NA	76	True	AATAAA	-17	NA	29900362	29919864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_29900567_29901551_29901921_29904851_29904966_29919530
transcript_35796.known	chr16	+	1451	4	FSM	ENSG00000174939.11	ENST00000414952.6	1451	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	42.2400547137693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGATATTAAATAAAAAT	29900836	False	NA	-30	True	AAAACA	-40	NA	29900857	29919632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29919530
transcript_35797.known	chr16	+	1115	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	39.5165225640561	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29898530	True	NA	9	True	TATAAA	-19	NA	29900378	29906056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
transcript_35800.known	chr16	+	1816	3	FSM	ENSG00000174939.11	ENST00000308748.10	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	13.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29900383	False	NA	9	True	TATAAA	-19	NA	29900487	29906056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29901921_29904851_29904966_29905787
transcript_35805.known	chr16	+	1013	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	376.069585759515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957472	True	NA	14	True	AATAAA	-16	NA	29962110	29973048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
transcript_35807.nic	chr16	+	958	6	NIC	ENSG00000149932.17	novel	946	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	263	junction_1	219.287391338399	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957425	True	NA	14	True	AATAAA	-16	NA	29962063	29973048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_35810.known	chr16	+	946	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	254.781004001476	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957440	True	NA	14	True	AATAAA	-16	NA	29962078	29973048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_35811.known	chr16	+	721	5	FSM	ENSG00000149932.17	ENST00000575829.6	721	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	356.018521287868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCCTTCTCTGCTGTG	29957448	True	NA	NA	False	NA	NA	NA	29962086	29971466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971410
transcript_35814.known	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	284.226472201306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	29957465	True	NA	-10	True	NA	NA	NA	29962103	29972005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
transcript_3582.known	chr1	+	1335	10	FSM	ENSG00000126088.14	ENST00000651476.1	1335	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	308.344844629964	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005163	True	NA	15	True	AATAAA	-16	NA	45012161	45015575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_35820.nic	chr16	+	1258	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	90.4492190374787	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTGTCCTTTTT	29986715	True	NA	24	True	ATTAAA	-14	NA	29996225	30005790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
transcript_35831.known	chr16	+	883	7	FSM	ENSG00000169592.15	ENST00000567065.5	883	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	88.4006033161916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGATGCCCCCCCCCACG	29986735	True	NA	NA	False	GGGGCT	-35	NA	29996245	30005323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30005220
transcript_35832.known	chr16	+	1154	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	52.3789610011076	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29986730	True	NA	25	True	ATTAAA	-15	NA	29996240	30005791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
transcript_35834.known	chr16	+	880	7	FSM	ENSG00000169592.15	ENST00000567705.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	92.8505370055673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAACATGCACGGGTGTC	29986739	True	NA	NA	False	NA	NA	NA	29996249	30005577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001464_30001531_30005220
transcript_35837.known	chr16	-	2560	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	20.5216687647201	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTACTATTCAGTGGCCA	-29994640	True	NA	-8	True	AATAAA	-20	NA	29995617	29992329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
transcript_3584.known	chr1	+	1106	9	FSM	ENSG00000126088.14	ENST00000491773.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	439.575932007202	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTATTGTGTAGTTTT	45005249	True	NA	10	True	AATAAA	-11	NA	45012247	45015570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_35840.known	chr16	+	1489	6	FSM	ENSG00000169592.15	ENST00000304516.11	1489	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	77.0418068323946	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTTAAAAGGGCAGCT	29995679	False	NA	-49	True	NA	NA	NA	29995714	30005717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30005220
transcript_35843.known	chr16	-	988	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	53.4131070056779	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-29995608	False	NA	-4	True	AATAAA	-27	NA	29995643	29992989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
transcript_35847.known	chr16	-	2313	5	FSM	ENSG00000149926.14	ENST00000380495.9	2325	5	12	0	12	0	multi-exon	FALSE	canonical	3	63	junction_4	8.44097150806707	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCCTTGCCACCAAG	-30031149	False	NA	-5	True	AATAAA	-22	NA	30031259	30024426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30025468_30025725_30025822_30026608_30026844_30029431_30029516_30030402
transcript_35848.known	chr16	+	4469	7	FSM	ENSG00000169592.15	ENST00000569957.5	4469	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	102.551883887566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGCTCTGGGTTT	29986727	True	NA	8	True	AATGAA	-12	NA	29996237	30005774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30004658_30005220
transcript_35849.known	chr16	-	2013	11	FSM	ENSG00000149927.18	ENST00000350119.9	2013	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.3891272223562	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGACTCGTGTGTGCTGG	-30010949	True	NA	-5	True	AATAAA	-14	NA	30011027	30005513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902
transcript_35850.known	chr16	+	1359	11	FSM	ENSG00000149925.22	ENST00000569545.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_2	4201.71124186325	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACTCTTGAAGAGGAG	30054823	True	NA	NA	False	NA	NA	NA	30064184	30070257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30064249_30064423_30064506_30065875_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35854.known	chr16	+	2323	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5395.92772594932	3267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30053000	True	NA	21	True	AATAAA	-18	NA	30053150	30070414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35857.known	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4765.61925037095	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	29959537	True	NA	21	True	AATAAA	-18	NA	30065759	30070414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35863.known	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	3777.50502771009	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	30064023	False	NA	18	True	AATAAA	-15	NA	30064496	30070411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35875.known	chr16	+	1550	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_1	2958.74876161782	2173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30064017	False	NA	21	True	AATAAA	-18	NA	30064273	30070414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35876.known	chr16	+	1486	9	FSM	ENSG00000149925.22	ENST00000643777.4	1486	9	0	0	0	0	multi-exon	FALSE	canonical	3	7633	junction_1	1315.84216734949	6734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	29959537	True	NA	21	True	AATAAA	-18	NA	30065759	30070414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35877.known	chr16	+	1447	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	0	0	0	0	multi-exon	TRUE	canonical	3	704	junction_5	3651.02947596633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	29959554	True	NA	-13	True	NA	NA	NA	30065776	30070380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_35879.nic	chr16	+	1482	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_2	1028.38365287474	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	30055613	True	NA	108	True	AATAAA	-15	NA	30075972	30085376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_30076095_30076314_30076476_30081199_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_35884.known	chr16	+	1402	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	2200	junction_1	376.416574422541	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	30055634	True	NA	108	True	AATAAA	-15	NA	30075993	30085376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_35893.known	chr16	+	1447	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	2200	junction_1	402.154097787586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	30055647	True	NA	79	True	GATAAA	-21	NA	30076006	30085347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
transcript_35896.known	chr16	+	941	8	FSM	ENSG00000149923.14	ENST00000562664.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_4	932.216625433538	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGACTACTTCCTGTG	30055658	True	NA	NA	False	NA	NA	NA	30076017	30085041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_35897.known	chr16	+	1301	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1053.07948805551	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	30055663	True	NA	88	True	GATAAA	-30	NA	30076022	30085356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_35901.known	chr16	+	846	7	FSM	ENSG00000149923.14	ENST00000563732.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1117.57735253041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGGAAGGTTACAAG	30055618	True	NA	NA	False	NA	NA	NA	30075977	30084779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665
transcript_35906.known	chr16	-	1843	9	FSM	ENSG00000149922.12	ENST00000395224.7	1843	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	6.19349457091875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTCCTGTGTTTGG	-30091632	False	2678	2	True	AATAAA	-28	NA	30091924	30085792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075_30091242_30091872
transcript_35907.known	chr16	-	1796	8	FSM	ENSG00000149922.12	ENST00000279386.6	1796	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	4.45384493374854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGGCTCCTGTGTT	-30090957	False	NA	-1	True	AATAAA	-25	NA	30091249	30085795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075
transcript_35910.known	chr16	-	796	5	FSM	ENSG00000090238.12	ENST00000566595.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	131.873755918302	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGCTCTGGACCCTC	-30096620	True	NA	NA	False	NA	NA	NA	30096912	30092636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096615
transcript_35911.known	chr16	+	1650	2	FSM	ENSG00000250616.3	ENST00000515455.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	30096297	True	NA	6	True	AGTAAA	-18	NA	30096429	30104116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30097420_30103456
transcript_35914.nnic	chr16	+	719	2	FSM	ENSG00000250616.3	ENST00000693600.1	718	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	39	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	30095351	True	NA	6	True	AGTAAA	-18	NA	30097073	30104116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30097420_30103743
transcript_35916.nic	chr16	-	1867	10	NIC	ENSG00000102882.12	novel	1787	9	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	2	14	junction_2	116.568000606651	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGACCCTGGCTCTGTC	-30123238	False	NA	-8	True	TATAAA	-17	NA	30123256	30114111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_30114709_30115594_30115646_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_35918.nic	chr16	-	1687	9	NIC	ENSG00000102882.12	novel	1787	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	99.9087083291542	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-30122989	False	NA	-1	True	TATAAA	-24	NA	30123007	30114104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30122926
transcript_35919.known	chr16	-	1787	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	24.8768843507381	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-30121012	True	NA	-1	True	TATAAA	-24	NA	30123220	30114104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_35921.known	chr16	-	1743	8	FSM	ENSG00000102882.12	ENST00000322266.9	1743	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	97.3795435920917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-30123291	False	NA	-2	True	TATAAA	-23	NA	30123309	30114105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_35923.known	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	25.8093480928828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-30122950	False	2208	-2	True	TATAAA	-23	NA	30122968	30114105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
transcript_35924.known	chr16	+	1623	11	FSM	ENSG00000102879.16	ENST00000219150.10	1623	11	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	7.85111457055621	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGACTCTGATGACT	30183509	True	NA	NA	False	AATAAA	-20	NA	30183601	30189076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_35926.known	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.314891693851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	NA	False	NA	6	True	AATAAA	-18	NA	30199254	30204310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_35928.known	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	236.72597554979	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
transcript_35929.known	chr16	-	335	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1200.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	-30193217	True	NA	NA	False	ATTAAA	-15	NA	30193666	30192933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193075_30193357_30193418_30193532
transcript_35930.known	chr16	-	1012	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	2524	junction_1	90.5	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	30194306	30192934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193075_30193357_30193456_30193532
transcript_35931.known	chr16	-	687	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	2705	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	30193697	30192933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193456_30193532
transcript_35932.known	chr16	-	307	2	FSM	ENSG00000169627.9	ENST00000565525.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	2524	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	-30193075	False	NA	NA	False	ATTAAA	-14	NA	30193524	30192934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193075_30193357
transcript_35933.known	chr16	+	1326	8	FSM	ENSG00000261052.6	ENST00000395138.6	1326	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67.7597797745981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	NA	False	NA	6	True	AATAAA	-18	NA	30199859	30204310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30199904_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_35936.known	chr16	-	2362	13	FSM	ENSG00000183604.15	ENST00000411546.4	2374	13	7	5	-1	-5	multi-exon	TRUE	canonical	3	32	junction_8	155.838302059824	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACGTTTCTTCTTTTTC	-30334611	True	NA	NA	False	AATAAA	-30	NA	30335374	30285022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298591_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334974
transcript_35937.known	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_6	25.5864547498606	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-30350355	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_35940.known	chr16	+	992	2	FSM	ENSG00000260219.3	ENST00000563252.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACAACAGCAGGTTCTTT	30355321	True	NA	NA	False	AAAACA	-7	NA	30355440	30357104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30355621_30356292
transcript_35941.nic	chr16	+	777	6	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	839	0	-179	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.5736384915046	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30375640	30377991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_35942.nic	chr16	+	633	5	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	1215	0	197	0	3prime_fragment	FALSE	canonical	3	12	junction_1	4.15331193145904	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30376016	30377991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_35943.nic	chr16	-	681	2	ISM	ENSG00000180096.13	ENST00000573615.5	1616	9	3464	-47	3464	0	3prime_fragment	FALSE	canonical	3	38	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCGAGCCTTCTCCTTCC	-30378866	False	NA	-2	True	AATAAA	-19	NA	30378906	30378136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_30378521_30378609
transcript_35948.known	chr16	-	878	3	FSM	ENSG00000179958.10	ENST00000568973.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCAGGGGTGCCTCTGA	-30419269	False	NA	59	True	NA	NA	NA	30429800	30423978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429588
transcript_35949.known	chr16	-	1024	3	FSM	ENSG00000179958.10	ENST00000678016.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	549	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	-30419293	False	10531	-15	True	AATAAA	-20	NA	30429824	30423697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429747
transcript_35950.known	chr16	-	1181	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_2	14.5	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGTTATTACCTGTTT	-30419499	True	NA	68	True	AGTAAA	-22	NA	30430030	30423614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429879
transcript_35951.known	chr16	-	749	3	FSM	ENSG00000179958.10	ENST00000565758.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	553.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTATTCCTGGATGGC	-30419461	True	NA	4	True	AGTAAA	-21	NA	30429992	30424033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429854
transcript_35952.known	chr16	-	2244	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTAATGTTTGGTGG	-30439992	True	NA	-8	True	AATAAA	-26	NA	30445874	30443630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30443600_30445900
transcript_35953.known	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	-30534970	False	NA	NA	False	NA	NA	NA	30535004	30532305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30533149_30534196_30534311_30534450
transcript_35954.known	chr16	+	1153	2	FSM	ENSG00000235560.4	ENST00000664247.1	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTTCCACTTCATTG	30534468	True	NA	NA	False	GATAAA	-21	NA	30535048	30537149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30535481_30536428
transcript_35955.known	chr16	-	1999	2	FSM	ENSG00000169957.10	ENST00000562803.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGGTGGGGAGTG	-30526787	False	NA	NA	False	NA	NA	NA	30526821	30524132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30526052_30526741
transcript_35956.known	chr16	-	2289	2	FSM	ENSG00000169957.10	ENST00000380412.7	2289	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACTTGTCCTTAAAATG	-30526532	False	860	-14	True	AATAAA	-17	NA	30526566	30524003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30526052_30526325
transcript_35957.known	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	-30571398	True	NA	-2	True	AATAGA	-17	NA	30571714	30569725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30570437_30571009_30571124_30571433
transcript_35958.known	chr16	-	3557	3	FSM	ENSG00000156853.13	ENST00000287461.8	3557	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCCTTGTGGAATTA	-30609489	True	NA	NA	False	ATTAAA	-17	NA	30610389	30602557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30605448_30609524_30609639_30609836
transcript_35959.known	chr16	-	1207	3	FSM	ENSG00000156853.13	ENST00000563304.5	1207	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTACCCCTCACTGCT	-30609486	True	NA	NA	False	NA	NA	NA	30610386	30604539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30605448_30609524_30609639_30610201
transcript_35961.known	chr16	+	2078	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.5408423669516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650416	True	NA	28	True	AGTAAA	-20	NA	30650959	30656413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_35965.known	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	26.4374032024449	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	30756732	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_35967.nic	chr16	+	1534	10	NIC	ENSG00000156873.16	novel	5384	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	83.6062198643139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCCTGTGTCTGTCT	30746383	True	NA	22	True	AATAAA	-23	NA	30748399	30757365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_30748491_30748802_30748916_30751105_30751218_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_35969.known	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	78.661016746261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	30746423	True	NA	-12	True	NA	NA	NA	30748439	30757331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
transcript_35970.known	chr16	+	5384	10	FSM	ENSG00000156873.16	ENST00000563588.6	5384	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	28.5687388504668	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTCTTCACACTCA	30746408	True	NA	NA	False	AATAAA	-22	NA	30748424	30761176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_35980.known	chr16	+	1791	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.8579972536672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAATCTGCTACAC	30746426	True	NA	-9	True	NA	NA	NA	30748442	30757334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_35985.nic	chr16	+	1051	7	NIC	ENSG00000156873.16	novel	5384	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	104.742011098169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGATAAAGTTTTGGA	30746388	True	NA	NA	False	AATAAA	-17	NA	30748404	30755265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30754874
transcript_35993.known	chr16	+	1649	3	FSM	ENSG00000281991.2	ENST00000615541.3	1649	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTAGTTTTCATTGCT	30740622	True	NA	38	True	NA	NA	NA	30740641	30745196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30740708_30741740_30741909_30743781
transcript_35994.known	chr16	-	1142	2	FSM	ENSG00000261840.4	ENST00000568500.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACACTACTTGGTGCCTT	-30698898	True	NA	-10	True	AATAAA	-17	NA	30699058	30697712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30697932_30698135
transcript_35995.known	chr16	+	648	3	FSM	ENSG00000260083.3	ENST00000564901.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTGGGAGGGGACGAGG	30875094	True	NA	NA	False	NA	NA	NA	30875460	30895080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30875487_30876029_30876119_30894547
transcript_35996.known	chr16	+	1375	2	FSM	ENSG00000260083.3	ENST00000663816.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATGAGTGTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	30875407	30895211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30876119_30894547
transcript_35997.known	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	30894193	True	NA	16	True	AATAAA	-22	NA	30894295	30895220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30894300_30895200
transcript_35998.known	chr16	+	2171	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.89605362185907	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	30984807	True	NA	14	True	ATTAAA	-15	NA	30985206	30989147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_35999.known	chr16	-	4674	10	FSM	ENSG00000099365.11	ENST00000215095.11	4674	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	1.64053589558149	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCGTGTGCTCACTTCC	-31009933	True	NA	-14	True	NA	NA	NA	31010638	30989255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30992902_30993129_30993241_30993346_30993485_30996682_30996757_30996950_30997060_30997501_30997576_31000927_31001003_31001093_31001194_31001528_31001604_31010366
transcript_36.known	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00092_+_0_1100
transcript_3600.known	chr1	+	1177	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	334.045819274841	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_36001.nic	chr16	+	1459	11	NIC	ENSG00000103496.15	novel	1410	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	49.7389183637924	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	31028948	True	NA	8	True	ATTAAA	-19	NA	31033530	31040164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_36003.known	chr16	+	1410	11	FSM	ENSG00000103496.15	ENST00000313843.8	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	15.9940613979064	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	31028975	True	NA	8	True	ATTAAA	-19	NA	31033557	31040164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_3601.known	chr1	+	1193	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	80.2493029083988	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005255	True	NA	15	True	AATAAA	-16	NA	45012253	45015575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_36012.known	chr16	+	846	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	66.594961437701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	31029023	True	NA	-20	True	NA	NA	NA	31033605	31034853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
transcript_36013.known	chr16	+	649	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	22.0957512255687	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	31029222	False	NA	4	True	AATAAA	-18	NA	31033804	31034877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
transcript_36014.known	chr16	+	1002	3	FSM	ENSG00000103496.15	ENST00000461455.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	31029005	True	NA	4	True	AATAAA	-18	NA	31033587	31034877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034225
transcript_36015.known	chr16	-	2685	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-31074212	False	NA	-4	True	ATTAAA	-19	NA	31074240	31060846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31062281_31063812_31064482_31073658
transcript_36016.known	chr16	-	1077	4	FSM	ENSG00000167397.15	ENST00000319788.11	1077	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	420.74457809935	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094928	False	NA	-5	True	AATAAA	-30	NA	31094940	31090841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31092782_31092865_31093311_31093422_31094556
transcript_3602.known	chr1	+	1102	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	342.474725344806	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_36020.known	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	40	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-31085838	True	NA	-17	True	AATAAA	-18	NA	31094797	31090853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31093311_31093422_31094556
transcript_36021.known	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	478.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31085801	True	NA	-5	True	AATAAA	-30	NA	31094760	31090841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31093311_31093483_31094556
transcript_36022.known	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094944	False	NA	-5	True	AATAAA	-30	NA	31094956	31090841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31094556
transcript_36023.known	chr16	+	2036	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	55.9756440541127	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	31101434	True	NA	12	True	NA	NA	NA	31108385	31112791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
transcript_36026.known	chr16	+	1997	11	FSM	ENSG00000103507.14	ENST00000394950.7	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	39.4827810570633	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGGCCCCGTGTGTGGG	NA	False	NA	18	True	ATTAAA	-20	NA	31108293	31112567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868
transcript_3603.known	chr1	+	1816	1	FSM	ENSG00000186603.7	ENST00000334815.6	1816	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCTTCTCCTGTGCTTC	45325967	True	NA	31	True	AATAAA	-36	NA	45326894	45328710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45326900_45328700
transcript_36030.known	chr16	+	392	1	FSM	ENSG00000278133.1	ENST00000613584.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTTTTTGTAGTTCTT	31123652	False	NA	NA	False	AATAAA	-19	NA	31123672	31124064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31123700_31124100
transcript_36034.known	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	TRUE	canonical	3	716	junction_3	21.0428135001002	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-31125319	True	NA	-5	True	ATTAAA	-15	NA	31135727	31131432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
transcript_3604.known	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	7.78716893357271	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-45490351	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_36067.known	chr16	+	1785	15	FSM	ENSG00000089280.19	ENST00000568685.1	1785	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	648.366613349363	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCATTAAAAGTGACCAT	31103915	True	NA	0	True	NA	NA	NA	31180150	31191575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189119_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_36079.known	chr16	+	1787	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	674.779902753308	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103902	True	NA	27	True	ATTAAA	-17	NA	31180137	31191602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_3612.known	chr1	-	1677	16	FSM	ENSG00000132781.20	ENST00000475516.5	1677	16	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_14	72.9354661479737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340035	False	NA	-2	True	AGTAAA	-20	NA	45340080	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45339975
transcript_36121.known	chr16	+	952	3	FSM	ENSG00000089280.19	ENST00000487045.6	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	1691	junction_1	45	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGACTCTTCTTA	31103903	True	NA	NA	False	NA	NA	NA	31180138	31183350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512
transcript_36122.known	chr16	+	4920	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_3	462.568463401185	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103914	True	NA	27	True	ATTAAA	-17	NA	31180149	31191602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_36123.known	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	11	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197160	True	NA	-4	True	AATATA	-18	NA	31202760	31201485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31201842_31202146_31202204_31202416
transcript_36126.known	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197156	True	NA	-4	True	AATATA	-18	NA	31202756	31201485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31201842_31202416
transcript_36127.known	chr16	+	1095	2	FSM	ENSG00000261359.2	ENST00000561916.2	1095	2	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTGTTTGAATCCT	31201825	True	NA	11	True	ATTAAA	-22	NA	31201884	31203452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31201987_31202459
transcript_36129.known	chr16	-	589	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGCGCGCACACGT	-31216936	True	NA	-5	True	AATAAA	-19	NA	31217135	31215961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31216158_31216742
transcript_3613.known	chr1	-	1742	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_14	73.0286397396407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45339294	True	NA	-2	True	AGTAAA	-20	NA	45340388	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
transcript_36130.known	chr16	-	372	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	-31428277	True	NA	-1	True	AATAAA	-16	NA	31428360	31427730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31427858_31428014_31428152_31428252
transcript_36131.known	chr16	-	3026	1	FSM	ENSG00000260267.1	ENST00000564629.1	3026	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTGTGTATGTGAGA	-31459557	True	NA	-2	True	NA	NA	NA	31459736	31456710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31456700_31459700
transcript_36132.known	chr16	+	1805	11	FSM	ENSG00000140682.19	ENST00000394863.8	1805	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	7.67854152818099	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	31471753	True	NA	6	True	CATAAA	-18	NA	31472151	31477958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_36133.nic	chr16	+	1347	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-37	949	-3	580	5prime_fragment	FALSE	canonical	2	11	junction_1	6.82316316348624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTATGTTATTATTGT	31471739	True	NA	20	True	AATAAA	-29	NA	31472137	31475339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
transcript_36134.known	chr16	+	1770	10	FSM	ENSG00000140682.19	ENST00000567607.5	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	7.32491098837756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	31473412	False	NA	6	True	CATAAA	-18	NA	31473425	31477958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_36135.known	chr16	-	2785	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	21.5192097645078	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTGCAGCTGGACCC	-31506891	True	NA	-11	True	AATAAA	-31	NA	31508391	31489474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_3614.known	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_15	72.7554808931946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45337812	True	NA	-2	True	AGTAAA	-20	NA	45339970	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_36141.known	chr16	+	655	2	FSM	ENSG00000260625.3	ENST00000569782.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGATCCCCACAGTTT	31508416	True	NA	NA	False	AATAAA	-25	NA	31508470	31509256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31509037_31509167
transcript_36142.known	chr16	+	488	3	FSM	ENSG00000169877.10	ENST00000302312.9	488	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	NA	False	NA	11	True	AATAAA	-23	NA	31527899	31528803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31527963_31528135_31528215_31528457
transcript_36143.known	chr16	+	1812	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	32	0	4	0	multi-exon	TRUE	canonical	1	2	junction_2	6.6332495807108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	31699961	True	NA	NA	False	NA	NA	NA	31700589	31707437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_36144.known	chr16	+	1571	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	0	5	0	multi-exon	FALSE	canonical	3	10	junction_1	5.01426536422407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	31700006	True	NA	NA	False	NA	NA	NA	31700634	31707437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_36145.known	chr16	+	1449	7	FSM	ENSG00000131797.13	ENST00000686087.1	1777	7	36	292	1	-15	multi-exon	FALSE	canonical	0	0	junction_1	7.73340517208012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	31699966	True	NA	NA	False	NA	NA	NA	31700594	31707422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31700739_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_3615.known	chr1	-	1776	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_2	59.454184041159	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340070	False	NA	-2	True	AGTAAA	-20	NA	45340115	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_36153.known	chr16	+	2769	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-10	0	2	0	multi-exon	FALSE	canonical	3	80	junction_4	10.7325439668328	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	31710577	True	NA	4	True	AATAAA	-14	NA	31713233	31761565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_36154.known	chr16	+	1670	5	FSM	ENSG00000197302.11	ENST00000531864.6	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.60965203320114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTATAATTAACTTTCA	31710590	True	NA	NA	False	TTTAAA	-11	NA	31713246	31794869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31753765_31753901_31792629_31792731_31793334_31793412_31793701
transcript_36155.known	chr16	+	5994	5	FSM	ENSG00000197302.11	ENST00000534277.5	5994	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	41.9791614971047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGCACCAGAATCCT	31710588	True	NA	9	True	AATAAA	-14	NA	31713244	31759886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765_31753901_31754454
transcript_3616.known	chr1	-	1888	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_2	59.5790418034918	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	NA	False	NA	-2	True	AGTAAA	-20	NA	45340470	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_36160.known	chr16	+	639	3	FSM	ENSG00000197302.11	ENST00000533488.6	639	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTAAAGAATGTGACAA	31710616	True	NA	NA	False	AAGAAA	-35	NA	31713272	31754795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31753765_31753901_31754454
transcript_36163.known	chr16	+	481	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	31710630	True	NA	NA	False	NA	NA	NA	31713286	31759553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31753765_31753901_31759356
transcript_36165.nnic	chr16	+	319	2	ISM	ENSG00000197302.11	ENST00000689850.1	2924	6	34	47279	-3	-39605	5prime_fragment	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGGTATTTTGGCCTT	31710627	True	NA	1	True	ATTAAA	-18	NA	31713283	31714251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_31713436_31714084
transcript_36166.known	chr16	+	837	3	FSM	ENSG00000197302.11	ENST00000539915.5	837	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	38.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGTATGTAATGTGG	31710575	True	NA	-36	True	AAAAAG	-12	NA	31713231	31759841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713449_31753765_31753901_31759356
transcript_36168.known	chr16	+	680	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	30.7845334543176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTTTGATCAATATA	31870931	True	NA	NA	False	NA	NA	NA	31873806	31914725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
transcript_3617.known	chr1	-	1662	16	FSM	ENSG00000132781.20	ENST00000528013.6	1662	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	88.270543721498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAAGCCCCCATT	-45339901	False	NA	-66	True	NA	NA	NA	45339946	45329305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45339898
transcript_36171.known	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	22.2161102706022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	31870931	True	NA	72	True	ATTAAA	-20	NA	31873806	31917357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
transcript_36173.known	chr16	-	5177	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_8	12.690766547201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTAATATATCAATGC	-46619689	True	NA	72	True	AATATA	-17	NA	46621379	46578590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_36177.known	chr16	-	530	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATGGCATCGCTTAT	-46619661	True	NA	NA	False	AATAAA	-27	NA	46621351	46620465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46620901_46621256
transcript_36179.known	chr16	-	6776	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	0	0	0	multi-exon	TRUE	canonical	3	454	junction_16	52.882978121509	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGGAGAAAGAAAAAAA	-46679633	True	NA	NA	False	NA	NA	NA	46689178	46656131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
transcript_3618.nic	chr1	-	1754	16	NIC	ENSG00000132781.20	novel	1744	16	NA	NA	20	0	combination_of_known_junctions	TRUE	canonical	1	15	junction_14	76.2928276809528	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340015	False	NA	-2	True	AGTAAA	-20	NA	45340060	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45339975
transcript_36186.nic	chr16	-	2658	16	NIC	ENSG00000069329.18	novel	5054	18	NA	NA	-8	-520	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	152.182784834553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACAAAACCCACAAG	-46679657	True	NA	29	True	TTTAAA	-32	NA	46689202	46660196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681521_46683507_46683607_46689130
transcript_3619.known	chr1	-	1891	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_14	76.3806258157132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340395	False	NA	-2	True	AGTAAA	-20	NA	45340440	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
transcript_36195.known	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	35.8767179224757	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46680590	True	NA	20	True	AATAAA	-18	NA	46689658	46698394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_36196.nic	chr16	+	1722	7	NIC	ENSG00000091651.9	novel	1615	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	165.319891926733	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46680542	True	NA	20	True	AATAAA	-18	NA	46689610	46698394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_36198.known	chr16	+	888	6	FSM	ENSG00000091651.9	ENST00000568364.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	191.473653540115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAATTGGAGGCCGG	46680628	True	NA	NA	False	NA	NA	NA	46689696	46697818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46696016_46696086_46697457
transcript_36199.known	chr16	+	1833	4	FSM	ENSG00000091651.9	ENST00000569239.5	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	11.7851130197758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGGCCGGGCGGGGGG	46680590	True	NA	NA	False	GGGGCT	-29	NA	46689658	46694519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092
transcript_36200.known	chr16	-	6845	4	FSM	ENSG00000155330.10	ENST00000285697.9	6845	4	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_2	48.5249076935409	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATACTTACCAT	-46830037	True	NA	NA	False	AGTAAA	-18	NA	46831180	46796602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46803071_46809602_46809786_46824385_46824483_46831083
transcript_36201.known	chr16	-	6640	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	133.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATCATGTATACTTA	-46831139	False	NA	NA	False	AGTAAA	-14	NA	46831162	46796606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46803071_46824385_46824483_46831083
transcript_36205.nnic	chr16	-	1655	10	NNC	ENSG00000069345.12	novel	3008	9	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	265.847491785965	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCAGTGTAGTCTGTC	-46949329	True	NA	-7	True	AATAAA	-14	NA	46973708	46955364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_46955623_46957006_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_36208.known	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	54.0248785283225	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-46949295	True	NA	-4	True	AATAAA	-17	NA	46973674	46955361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_36219.known	chr16	+	516	2	FSM	ENSG00000261173.1	ENST00000562536.1	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAGCCACTGTAGC	46973803	False	NA	11	True	AATAAA	-22	NA	46973988	46978983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46974126_46978604
transcript_36220.known	chr16	-	3185	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	0	0	0	multi-exon	TRUE	canonical	3	321	junction_3	30.4268366338542	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCAGTGAGTTT	-47454902	True	NA	NA	False	AATAAA	-16	NA	47461063	47154390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_36224.nic	chr16	-	1187	6	NIC	ENSG00000129636.13	novel	2663	5	NA	NA	-19	1532	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	151.38427923665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTTTACTTAATCTG	-47454921	True	NA	NA	False	AATAAA	-17	NA	47461082	47449863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_47450454_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_36225.nic	chr16	-	735	6	NIC	ENSG00000129636.13	novel	2663	5	NA	NA	-19	1080	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	151.38427923665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTGAACTTTGAAAT	-47454921	True	NA	NA	False	AATAAA	-23	NA	47461082	47450315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_47450454_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_36228.known	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	36.3207471032092	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	47457737	True	NA	10	True	AATAAA	-16	NA	47461294	47699745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_36231.known	chr16	-	1325	2	FSM	ENSG00000261325.2	ENST00000570024.2	1330	2	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTCTCTGGGTCTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	47887130	47849313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_47849949_47886440
transcript_36232.known	chr16	+	8195	15	FSM	ENSG00000102910.14	ENST00000285737.9	8195	15	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_2	22.8898203914102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGTTAGGATCATA	48240746	True	NA	NA	False	GATAAA	-18	NA	48244299	48357349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48244622_48252130_48252366_48256609_48256742_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_36233.known	chr16	+	2580	14	FSM	ENSG00000102910.14	ENST00000535754.5	2580	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	50.3382640582923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTTTATAAACATAATC	48240779	True	NA	-82	True	NA	NA	NA	48244332	48351899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48244622_48252130_48252366_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_36234.known	chr16	-	2415	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48365807	True	NA	NA	False	ATTAAA	-25	NA	48365901	48360530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_48362431_48365386
transcript_36235.nnic	chr16	-	1945	2	NNC	ENSG00000196470.12	novel	2415	2	NA	NA	593	0	intron_retention	FALSE	canonical	2	24	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48384790	False	NA	NA	False	ATTAAA	-25	NA	48384820	48360530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_48362431_48384775
transcript_36236.known	chr16	-	2110	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48381993	True	NA	NA	False	ATTAAA	-25	NA	48385413	48360530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_48362431_48385203
transcript_36237.known	chr16	+	2237	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	48623005	True	NA	NA	False	GATAAA	-37	NA	48623421	48746318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
transcript_36239.nnic	chr16	+	747	2	FSM	ENSG00000260086.4	ENST00000686696.1	750	2	2	1	2	-1	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGCGACATTTGCTT	48623019	True	NA	NA	False	AATAAA	-16	NA	48623435	48676972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48623604_48676393
transcript_3624.nnic	chr1	-	1780	15	NIC	ENSG00000132781.20	novel	1776	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_10	77.3894207820397	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340116	False	NA	-2	True	AGTAAA	-20	NA	45340161	45329241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_36243.known	chr16	+	1075	4	FSM	ENSG00000279249.3	ENST00000662695.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281969	True	NA	NA	False	AATAAA	-21	NA	49282119	49290472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_49282233_49287366_49287476_49289537_49289656_49289737
transcript_36244.known	chr16	+	2884	5	FSM	ENSG00000279249.3	ENST00000670604.1	2884	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7.29725975966321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGTGTGTGAGAAAA	49281911	True	NA	NA	False	AATAAA	-26	NA	49282061	49290477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_49282233_49285482_49285521_49287366_49287476_49287829_49289656_49289737
transcript_36245.known	chr16	+	1210	5	FSM	ENSG00000279249.3	ENST00000668965.1	1210	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	3.19178633370093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281911	True	NA	NA	False	AATAAA	-21	NA	49282061	49290472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_49282233_49285482_49285624_49287366_49287476_49289443_49289656_49289895
transcript_36246.known	chr16	-	615	1	FSM	ENSG00000275155.1	ENST00000615979.1	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTGCACTGAATTTT	-49847607	False	NA	0	True	AATAAA	-18	NA	49847632	49847017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_49847000_49847600
transcript_36247.known	chr16	+	2965	7	FSM	ENSG00000205423.12	ENST00000458059.7	2965	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	85.9935398090397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTTCTTTATTGT	NA	False	NA	15	True	AATAAA	-22	NA	50024409	50037088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_36248.known	chr16	+	2092	6	FSM	ENSG00000205423.12	ENST00000427478.7	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	19.7787765041218	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGATTGGACTTTTTCT	50023065	True	NA	8	True	AATAAA	-15	NA	50025224	50037081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_36249.known	chr16	+	579	6	FSM	ENSG00000205423.12	ENST00000389134.9	579	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	97.8762483956144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTTGATGATGGTGA	50023074	True	NA	NA	False	NA	NA	NA	50025233	50035600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_36250.known	chr16	+	1992	5	FSM	ENSG00000205423.12	ENST00000568890.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	88.4657419569858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGACTTTTTCTTTAT	50023095	True	NA	12	True	AATAAA	-19	NA	50025254	50037085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_36251.known	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	105.422198059754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	-50368160	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_36255.known	chr16	-	5424	17	FSM	ENSG00000166164.16	ENST00000394688.8	5424	17	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_14	56.181034110721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGAGAGGGAGTCT	-50357704	True	NA	NA	False	NA	NA	NA	50368988	50315956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320775_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_36257.known	chr16	+	3513	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	13.8148909178706	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	50740724	True	NA	3	True	AATAAA	-17	NA	50742049	50796881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_36259.known	chr16	+	2248	2	FSM	ENSG00000261241.8	ENST00000576842.2	2264	2	16	0	16	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCTGAGAGTCCCT	50880178	True	NA	NA	False	AATAAA	-17	NA	50880208	50884101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50880262_50881906
transcript_36260.known	chr16	+	1377	1	FSM	ENSG00000224578.5	ENST00000562726.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18687	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTGCAGAACACCTAT	51645744	False	NA	NA	False	GATAAA	-29	NA	51645755	51647132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_51645800_51647100
transcript_36262.known	chr16	+	11547	39	FSM	ENSG00000177200.18	ENST00000447540.6	11547	39	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.19827041398895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTCAGCCTCTGTAC	53054212	True	NA	5	True	ATTAAA	-18	NA	53054990	53327497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53055078_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307954_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_36264.known	chr16	+	11504	39	FSM	ENSG00000177200.18	ENST00000564845.5	11504	39	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.3757482366104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	NA	False	NA	15	True	ATTAAA	-27	NA	53130920	53327451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53131059_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307906_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_36267.nic	chr16	+	754	4	NIC	ENSG00000177200.18	novel	703	3	NA	NA	-29	-16	intron_retention	FALSE	canonical	1	3	junction_1	12.9614813968157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAGAAAAAAATACGCA	53206346	True	NA	NA	False	NA	NA	NA	53208421	53226387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_53208710_53209481_53209814_53222643_53222756_53226365
transcript_36271.nnic	chr16	+	958	3	NNC	ENSG00000177200.18	novel	720	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGTTCAATATTTAT	53054250	True	NA	15	True	AATAAA	-28	NA	53055028	53122178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_53055078_53081778_53081809_53121299
transcript_36274.known	chr16	+	703	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	12	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	53206375	True	NA	NA	False	ATTAAA	-17	NA	53208450	53222755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53208710_53209481_53209814_53222643
transcript_36275.known	chr16	+	720	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATCATGTTAGAGTC	53054260	True	NA	NA	False	NA	NA	NA	53055038	53121980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53055078_53121299
transcript_36278.nic	chr16	+	586	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-29	12976	-29	-34	5prime_fragment	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTCTAAGTTAAAAGAG	53206346	True	NA	NA	False	AAAACA	-5	NA	53208421	53209779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53208710_53209481
transcript_36279.nic	chr16	+	1113	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-29	12449	-29	493	5prime_fragment	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTAATACCATATAAATCA	53206346	True	NA	NA	False	AATAAA	-45	NA	53208421	53210306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53208710_53209481
transcript_36280.known	chr16	+	968	2	FSM	ENSG00000177200.18	ENST00000564582.2	968	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGTTCAATATTTAT	53099169	False	NA	15	True	AATAAA	-28	NA	53099179	53122178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53099269_53121299
transcript_36281.nic	chr16	-	2181	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-25	73	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	28.701529188839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAACTGCCAGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	53503269	53491305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36282.known	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	29.6577181676807	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	-53502152	True	NA	1	True	ATTAAA	-19	NA	53503209	53491039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36283.nic	chr16	-	2108	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	28.701529188839	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	53503269	53491378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36284.known	chr16	-	1162	10	FSM	ENSG00000166971.17	ENST00000570004.5	1162	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	47.0909285909246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	-53502166	True	NA	-1	True	AGTAAA	-17	NA	53503223	53492304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_36289.nic	chr16	-	1810	10	NIC	ENSG00000166971.17	novel	1162	10	NA	NA	-9	-42	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	46.592268738202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAAACTACCCTTTTC	-53502196	True	NA	NA	False	AATAAA	-29	NA	53503253	53491689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_36290.nic	chr16	-	1797	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-25	-42	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	28.701529188839	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAAACTACCCTTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	53503269	53491689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36295.nic	chr16	-	1182	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	28.701529188839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	NA	False	NA	-1	True	AGTAAA	-17	NA	53503269	53492304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36300.nic	chr16	-	1351	4	ISM	ENSG00000103494.16	ENST00000680907.1	1816	11	-36	28441	15	904	5prime_fragment	FALSE	canonical	3	41	junction_1	24.4585817704589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAGAGAAACTTTATTAT	-53702646	True	NA	NA	False	AATAAA	-20	NA	53703874	53691322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_53692365_53696150_53696296_53700638_53700731_53703802
transcript_36301.known	chr16	-	893	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	8	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTATGTGCAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	53703938	53695630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53696296_53700638_53700731_53703802
transcript_36303.nic	chr16	+	2183	10	NIC	ENSG00000140718.21	novel	1636	10	NA	NA	-19	-500	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	101.112820498371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCTTAAATTTGATTA	53698882	True	NA	NA	False	AATAAA	-14	NA	53704136	54040226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54039344_54039435_54039545
transcript_36304.known	chr16	+	11573	9	FSM	ENSG00000140718.21	ENST00000471389.6	11573	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	22.1345318450606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATGCTTGGTGTTA	53698901	True	NA	NA	False	AATAAA	-14	NA	53704155	54121941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761
transcript_36307.known	chr16	-	1883	5	FSM	ENSG00000245694.11	ENST00000660344.1	1883	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	26.6211851727154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGACTCACCCGGC	-54929019	False	NA	NA	False	ATTAAA	-14	NA	54929189	54917955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928769
transcript_36308.known	chr16	-	1603	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	9.36416040016402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAACCTTTTGGGGTTT	-54928549	True	NA	NA	False	ATTAAA	-2	NA	54928838	54917967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
transcript_36310.nnic	chr16	+	2785	14	NNC	ENSG00000087245.13	novel	3514	13	NA	NA	-11	0	intron_retention	FALSE	non_canonical	1	3	junction_1	100.206237035568	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTTGCCATCTGTTT	55478945	False	NA	16	True	AATAAA	-16	NA	55479186	55506237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_55479276_55479561_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_36311.known	chr16	+	5313	14	FSM	ENSG00000087253.13	ENST00000262134.10	5313	14	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_12	7.23649527777953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTTCTGGTGGGTT	55508303	True	NA	NA	False	ATTAAA	-17	NA	55509071	55586666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55545734_55545818_55549276_55549403_55550948_55551103_55574630_55574730_55579108_55579245_55582913
transcript_36312.nic	chr16	+	1181	9	NIC	ENSG00000087253.13	novel	5313	14	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	8.20060973342836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCAATCTTCCTCATC	55509030	False	NA	6	True	AATAAA	-21	NA	55509043	55542028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55541837
transcript_36315.known	chr16	+	832	2	FSM	ENSG00000087253.13	ENST00000566911.1	832	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCTGCAGTGGCATA	55508303	True	NA	NA	False	NA	NA	NA	55509071	55526058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_55509353_55525507
transcript_36316.nnic	chr16	+	538	3	NNC	ENSG00000228695.10	novel	1704	14	NA	NA	32514	198	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	55793155	55794158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_55793239_55793407_55793481_55793776
transcript_36318.known	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	45.6978946763926	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	-56519188	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36319.known	chr16	-	2712	18	FSM	ENSG00000125124.14	ENST00000682348.1	2712	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	55.9122520633523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATATAAATACATATTTT	-56519157	True	NA	-96	True	NA	NA	NA	56519993	56484480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56501944_56502080_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36320.known	chr16	-	2704	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	37.0729327643498	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	-56519188	True	NA	0	True	ATTAAA	-17	NA	56520024	56484384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36321.known	chr16	-	2835	17	FSM	ENSG00000125124.14	ENST00000682737.1	2835	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	48.170108729377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	56520114	56484132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519956
transcript_36324.known	chr16	-	2992	16	FSM	ENSG00000125124.14	ENST00000684020.1	2992	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	38.210295296774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519232	True	NA	-10	True	ATTAAA	-45	NA	56520068	56484356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36325.known	chr16	-	2777	16	FSM	ENSG00000125124.14	ENST00000683347.1	2777	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	49.5519480500571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519228	True	NA	-10	True	ATTAAA	-45	NA	56520064	56484356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519956
transcript_36329.known	chr16	-	2610	17	FSM	ENSG00000125124.14	ENST00000682658.1	2610	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	49.0750382068114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTGAGTTTGTACTTT	-56519188	True	NA	-65	True	TATAAA	-22	NA	56520024	56484449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502701_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36334.known	chr16	+	4587	13	FSM	ENSG00000087263.17	ENST00000566157.6	4587	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	38.2368350619603	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTTCTCTCTTTAT	56446464	True	NA	NA	False	GATAAA	-24	NA	56451553	56479104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56451767_56453262_56453409_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_36339.known	chr16	+	2415	13	FSM	ENSG00000087263.17	ENST00000336111.9	2415	13	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	161.65103017165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAGAAAA	56446434	True	NA	NA	False	NA	NA	NA	56451523	56477129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56451568_56453262_56453381_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_36345.known	chr16	-	4393	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	0	0	0	multi-exon	TRUE	canonical	3	1092	junction_4	68.3073121187541	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGATTGTTTTGG	-56434239	True	NA	-6	True	AATAAA	-18	NA	56451332	56429132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
transcript_36351.known	chr16	+	406	3	FSM	ENSG00000087250.9	ENST00000200691.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAAGGACTGGTCTCT	56589505	True	NA	NA	False	AATAAA	-15	NA	56589527	56591085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56589622_56589869_56589936_56590839
transcript_36352.known	chr16	+	401	3	FSM	ENSG00000125148.7	ENST00000245185.6	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	44	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	56596158	True	NA	27	True	AATAAA	-16	NA	56608583	56609497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56608684_56608991_56609058_56609262
transcript_36353.known	chr16	+	903	1	FSM	ENSG00000125148.7	ENST00000562017.1	903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	56596169	True	NA	27	True	AATAAA	-16	NA	56608594	56609497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56608600_56609500
transcript_36354.known	chr16	+	186	3	FSM	ENSG00000260549.3	ENST00000566367.2	186	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGACAGCCCTGCTCC	56617422	False	NA	NA	False	NA	NA	NA	56617562	56618680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56617591_56618178_56618245_56618588
transcript_36355.known	chr16	+	332	2	FSM	ENSG00000169715.15	ENST00000568293.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56618145	True	NA	28	True	AATAAA	-18	NA	56625780	56627112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56625880_56626879
transcript_36356.known	chr16	+	398	3	FSM	ENSG00000205364.4	ENST00000379818.4	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	8.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56632544	True	NA	6	True	AATAAA	-17	NA	56632658	56633981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56632760_56633339_56633406_56633750
transcript_36357.known	chr16	+	186	3	FSM	ENSG00000255986.6	ENST00000444023.4	186	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAACAGCTCTTCTCC	56635797	False	NA	-60	True	NA	NA	NA	56635817	56636943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56635846_56636438_56636505_56636851
transcript_36358.known	chr16	+	396	3	FSM	ENSG00000205362.11	ENST00000290705.12	396	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTGGTTTTCTTT	56638613	True	NA	4	True	AATAAA	-15	NA	56638665	56640087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56638767_56639263_56639330_56639858
transcript_36359.known	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	28	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	56650422	True	NA	15	True	ATTAAA	-15	NA	56657958	56659303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56658087_56658674_56658741_56659072
transcript_36360.known	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	193.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	56650475	True	NA	17	True	ATTAAA	-17	NA	56658011	56659305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56658087_56658674_56658783_56659072
transcript_36363.known	chr16	-	406	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	97.5	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGGTTCCTGTTGTGT	-56642030	True	NA	-7	True	ATTAAA	-18	NA	56668065	56666730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56666971_56667311_56667378_56667965
transcript_36364.known	chr16	-	410	3	FSM	ENSG00000125144.14	ENST00000379811.4	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	225.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTTCCTGTTGTGTT	-56642030	True	NA	-6	True	ATTAAA	-19	NA	56668065	56666729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56666971_56667311_56667381_56667965
transcript_36367.known	chr16	-	305	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	-56641999	True	NA	-11	True	ATTAAA	-14	NA	56668034	56666734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56666971_56667965
transcript_36368.nnic	chr16	+	633	3	NNC	ENSG00000205358.4	novel	397	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	359	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667052	True	NA	14	True	ATTAAA	-14	NA	56669806	56671129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_56669913_56670505_56670572_56670668
transcript_36369.known	chr16	+	397	3	FSM	ENSG00000205358.4	ENST00000332374.5	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	31	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667059	True	NA	14	True	ATTAAA	-14	NA	56669813	56671129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56669913_56670505_56670572_56670897
transcript_36370.known	chr16	+	697	2	FSM	ENSG00000205358.4	ENST00000569155.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667085	True	NA	14	True	ATTAAA	-14	NA	56669839	56671129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56669913_56670505
transcript_36371.known	chr16	+	242	3	FSM	ENSG00000275691.2	ENST00000379816.5	242	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTAGAAAGTGTACAAA	56673377	False	NA	-92	True	NA	NA	NA	56676131	56677763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56676218_56677070_56677115_56677651
transcript_36372.known	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_2	272	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666575	True	NA	18	True	AATAAA	-14	NA	56682469	56684196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682569_56683164_56683231_56683957
transcript_36373.known	chr16	+	549	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666586	True	NA	18	True	AATAAA	-14	NA	56682480	56684196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682569_56683164_56683387_56683957
transcript_36374.known	chr16	+	538	2	FSM	ENSG00000187193.9	ENST00000562939.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	2897	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCCCTAGCCTTCCCC	56666575	True	NA	NA	False	NA	NA	NA	56682469	56683603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682569_56683164
transcript_36375.known	chr16	+	1727	1	FSM	ENSG00000187193.9	ENST00000568370.1	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666575	True	NA	18	True	AATAAA	-14	NA	56682469	56684196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682500_56684200
transcript_36377.known	chr16	+	8234	22	FSM	ENSG00000102900.13	ENST00000308159.10	8234	22	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_7	106.69310896742	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTGCCATGTGCCC	56716757	True	NA	NA	False	AGTAAA	-15	NA	56730128	56850286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56730212_56748233_56748427_56758537_56758656_56798475_56798539_56805503_56805633_56818663_56818739_56821503_56821594_56823706_56823847_56828976_56829110_56830527_56830686_56831841_56832008_56832294_56832389_56833214_56833407_56834127_56834255_56834369_56834443_56834733_56834779_56836600_56836718_56837607_56837727_56838951_56839070_56839520_56839605_56841704_56841834_56844498
transcript_36400.known	chr16	+	1862	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	89.3683046585926	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929756	True	NA	22	True	AATAAA	-22	NA	56932146	56943881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_36406.known	chr16	+	1388	6	FSM	ENSG00000051108.15	ENST00000344114.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	122.384639559056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929756	True	NA	22	True	AATAAA	-22	NA	56932146	56943881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56942131_56942238_56943125
transcript_36407.known	chr16	+	1125	4	FSM	ENSG00000051108.15	ENST00000569569.5	1125	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	6.97614984548545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCCCCTTTTTCTAGTA	56929756	True	NA	NA	False	NA	NA	NA	56932146	56937413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935400_56935476_56936686
transcript_36408.known	chr16	+	570	2	FSM	ENSG00000051108.15	ENST00000562914.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGAGACTGTATG	56929751	True	NA	NA	False	AATAAA	-17	NA	56932141	56935554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234
transcript_36409.nic	chr16	+	1160	8	ISM	ENSG00000140848.17	ENST00000565874.5	1976	15	11138	-171	-1617	0	3prime_fragment	FALSE	canonical	3	93	junction_2	12.6716782065924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTTTCCAAGTAACT	NA	False	NA	16	True	AATAAA	-17	NA	57121688	57147966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_57121761_57123413_57123474_57125859_57125994_57127848_57127904_57134774_57134827_57137148_57137283_57146084_57146322_57147550
transcript_36410.known	chr16	+	901	2	FSM	ENSG00000140848.17	ENST00000567011.1	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTACAACCGGACCTC	NA	False	NA	NA	False	NA	NA	NA	57145639	57147769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57146322_57147550
transcript_36422.known	chr16	-	1055	8	FSM	ENSG00000172775.17	ENST00000564108.5	1055	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	391.047990165203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAGGGAGCTCCTCCC	-57178230	True	NA	NA	False	NA	NA	NA	57186032	57154278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57175538_57175591_57185820
transcript_36439.known	chr16	-	1086	7	FSM	ENSG00000172775.17	ENST00000567439.5	1086	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	378.062458096836	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTGCATCCTGTGT	-57178238	True	NA	-82	True	NA	NA	NA	57186040	57154199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185824
transcript_36440.nic	chr16	-	1682	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-59	203	intron_retention	FALSE	canonical	0	0	junction_3	353.177677978411	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAGAAACAAACGTAG	-57186158	False	NA	41	True	AATAAA	-23	NA	57186175	57153532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_36443.nic	chr16	-	1479	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-59	0	intron_retention	FALSE	canonical	0	0	junction_3	353.177677978411	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGGGGTGTCACTTC	-57186158	False	NA	-29	True	AGTAAA	-15	NA	57186175	57153735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_36447.nic	chr16	-	1080	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	353.177677978411	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTGTGGCCCGAATCG	-57186158	False	NA	-17	True	NA	NA	NA	57186175	57154134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_36453.nic	chr16	+	2463	15	NIC	ENSG00000159579.14	novel	3586	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	49.3738342667863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	57182718	True	NA	NA	False	AAAAAG	-8	NA	57186279	57239046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_36455.nic	chr16	+	3886	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	49.3738342667863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	57182718	True	NA	36	True	AATAAA	-21	NA	57186279	57240469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_36456.known	chr16	+	3503	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	44.3020707121886	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	57182767	True	NA	36	True	AATAAA	-21	NA	57186328	57240469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_36459.known	chr16	+	3586	15	FSM	ENSG00000159579.14	ENST00000537866.5	3586	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	59.2219967407312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATGAATTATTGACTA	57182771	True	NA	5	True	AATAAA	-20	NA	57186332	57239957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57187051_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_36461.nic	chr16	+	2061	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	65.033154809603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	57182764	True	NA	NA	False	AAAAAG	-8	NA	57186325	57239046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57186430_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_36463.known	chr16	+	1241	2	FSM	ENSG00000159579.14	ENST00000566352.1	1241	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAGTAAATATGGAGTG	57182749	True	NA	NA	False	GATAAA	-20	NA	57186310	57205269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57186786_57204503
transcript_36465.known	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	12.0233106921513	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	57243959	True	NA	49	True	AGTAAA	-35	NA	57245258	57253635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
transcript_36466.known	chr16	-	1497	4	FSM	ENSG00000102934.10	ENST00000219207.10	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGACAAGATGTTGGCAA	-57284344	True	NA	-10	True	AATAAA	-21	NA	57284672	57256096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57257030_57258461_57258585_57261896_57262071_57284405
transcript_36467.known	chr16	-	2016	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_7	317.792286722003	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	-57438364	True	NA	-18	True	AATAAA	-15	NA	57447419	57428186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
transcript_36468.known	chr16	-	2021	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	962	junction_8	99.8620924074796	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	-57438330	True	NA	-18	True	AATAAA	-15	NA	57447385	57428186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_3647.nic	chr1	+	2022	8	NIC	ENSG00000132773.12	novel	1887	8	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	28.5457027038597	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	45339005	True	NA	27	True	NA	NA	NA	45340142	45343973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
transcript_36479.known	chr16	-	1137	8	FSM	ENSG00000005194.15	ENST00000568940.5	1137	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	373.000957486324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTCATGTTAAGAGAAG	-57438313	True	NA	NA	False	NA	NA	NA	57447368	57428937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57429281_57430257_57430340_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_3648.known	chr1	+	1887	8	FSM	ENSG00000132773.12	ENST00000372090.6	1887	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	14.1911153579287	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	45339032	True	NA	27	True	NA	NA	NA	45340169	45343973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_36481.nic	chr16	-	1516	8	NIC	ENSG00000005194.15	novel	2016	9	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	374.106827480263	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATCTTGAGATTCTGC	-57438443	True	NA	-35	True	ATTAAA	-16	NA	57447498	57428553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57447341
transcript_36496.known	chr16	+	1630	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5730799099486	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	57443509	True	NA	10	True	AATAAA	-17	NA	57447478	57461270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_36507.known	chr16	-	1848	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_1	15.3010603874239	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	-57479864	False	NA	NA	False	NA	NA	NA	57479874	57472876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_3651.nic	chr1	+	1905	8	NIC	ENSG00000132773.12	novel	1887	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	30.1979861472075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	45339032	True	NA	27	True	NA	NA	NA	45340169	45343973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_45340323_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_36514.known	chr16	+	882	6	FSM	ENSG00000088682.14	ENST00000567933.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	103.584940990474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTGAAAAATGAGATG	57443527	True	NA	NA	False	NA	NA	NA	57447496	57460873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57459564_57459721_57460050_57460105_57460588
transcript_36515.known	chr16	+	1764	9	FSM	ENSG00000102978.13	ENST00000219252.10	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_7	41.0571248384492	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	57454103	True	NA	27	True	AATAAA	-18	NA	57462678	57472009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57462811_57463028_57463079_57465952_57466022_57466174_57466228_57469164_57469294_57469709_57469762_57469960_57470130_57470279_57470355_57470974
transcript_36516.known	chr16	+	1482	8	FSM	ENSG00000088682.14	ENST00000567072.5	1482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.542291584027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAAATATGTTTG	57443524	True	NA	-18	True	NA	NA	NA	57447493	57461242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456627_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_36518.nic	chr16	+	2719	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_16	87.8536304759891	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	NA	False	NA	11	True	ATTAAA	-13	NA	57735719	57757244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
transcript_36519.known	chr16	+	2618	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	87.8536304759891	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57730988	True	NA	11	True	ATTAAA	-13	NA	57735769	57757244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_36521.nic	chr16	+	2808	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_16	100.763071985228	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57731059	True	NA	11	True	ATTAAA	-13	NA	57735840	57757244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_36528.nic	chr16	+	410	4	ISM	ENSG00000159648.13	ENST00000441824.4	1434	8	8588	545	-49	0	3prime_fragment	FALSE	canonical	3	44	junction_1	1.4142135623731	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAATTGTCTCTGTCTGTG	57985041	True	NA	10	True	AATAAA	-24	NA	57985131	57987571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_57985268_57985481_57985547_57985908_57985942_57987395
transcript_36537.known	chr16	+	2248	7	FSM	ENSG00000103005.12	ENST00000219281.8	2248	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	22.5511763674438	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGGACTACTTGTA	57993428	True	NA	24	True	AATAAA	-22	NA	58001406	58021618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
transcript_36540.known	chr16	+	1212	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	182.564618697052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTCTCTTCCTCTCC	57993426	True	NA	NA	False	NA	NA	NA	58001404	58020634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
transcript_36542.known	chr16	+	1217	4	FSM	ENSG00000103005.12	ENST00000423271.7	1217	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	213.729319987273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATTTCACTCACCCT	57993428	True	NA	NA	False	NA	NA	NA	58001406	58011708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011017
transcript_36543.known	chr16	+	548	4	FSM	ENSG00000103005.12	ENST00000568848.5	548	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	214.666149067699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTCTTTCACTGAGG	57993440	True	NA	NA	False	NA	NA	NA	58001418	58011475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011441
transcript_36544.known	chr16	+	1751	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	213.729319987273	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	57993441	True	NA	7	True	AATAAA	-27	NA	58001419	58013558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
transcript_36546.known	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	23.7116005364463	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-58123309	True	NA	0	True	AATAAA	-24	NA	58129381	58113591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
transcript_36548.known	chr16	-	1605	5	FSM	ENSG00000070761.8	ENST00000562622.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	9.31396800509858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTAAATTTGTT	-58123299	True	NA	-14	True	AATAAA	-10	NA	58129371	58113605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58114031_58114809_58115458_58116040_58116153_58116871_58116952_58129031
transcript_36549.known	chr16	+	5272	9	FSM	ENSG00000103021.10	ENST00000219299.8	5272	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	16.293691263799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	58248930	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_36552.nnic	chr16	+	1332	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	0	-6323	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	23.9395497204172	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTACTCACGAAATTGAA	58248930	True	NA	NA	False	AATAAA	-15	NA	58249935	58277513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58277151
transcript_36553.known	chr16	+	1728	4	FSM	ENSG00000181938.14	ENST00000426538.6	1728	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAGCTGTCAGGGAGT	58391140	True	NA	NA	False	NA	NA	NA	58392393	58405481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58392788_58395101_58395219_58403097_58403332_58404498
transcript_36554.known	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	58391217	True	NA	18	True	AATACA	-22	NA	58392470	58406147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58392788_58403097_58403332_58404498
transcript_36556.known	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	58391140	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58392788_58404498
transcript_36558.known	chr16	-	655	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAAGTCCGACCCTTTC	-58392637	True	NA	-11	True	AATAAA	-24	NA	58392807	58392152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58392200_58392800
transcript_36559.known	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.0231532061166	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	4	True	ATTAAA	-16	NA	58500046	58513619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_36564.known	chr16	-	304	2	FSM	ENSG00000125107.19	ENST00000569263.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGGAAGTATTTTCT	-58612854	True	NA	16	True	AATAAA	-40	NA	58629847	58623225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58623410_58629727
transcript_36565.known	chr16	+	2042	9	FSM	ENSG00000103037.12	ENST00000310682.6	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	29.7814959328775	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGGGGAAAAGGATAT	58513003	True	NA	NA	False	TTTAAA	-39	NA	58515478	58519662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58515565_58515790_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_36568.nic	chr16	+	1298	8	NIC	ENSG00000103037.12	novel	2042	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	46.7498772234555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATACTCATTGATGTTT	58513016	True	NA	3	True	NA	NA	NA	58515491	58519076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_58515565_58515790_58515881_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_36577.known	chr16	-	4058	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_11	22.5875706331477	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCCCTGTGTCTGA	-58683014	True	NA	0	True	AATAAA	-19	NA	58684770	58665108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
transcript_36583.known	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_5	56.9151415120206	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	-58715996	True	NA	-17	True	AATAAA	-17	NA	58734316	58707130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_36588.known	chr16	-	1615	9	FSM	ENSG00000125166.13	ENST00000434819.2	1615	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	431.877297388969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACACGTTAGAGGCT	-58716006	True	NA	NA	False	NA	NA	NA	58734326	58707817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58723745_58723903_58734139
transcript_36600.known	chr16	-	566	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22916	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCTATCAACCT	NA	False	NA	NA	False	AATAAA	-30	NA	61055964	61055398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_61055400_61056000
transcript_36601.known	chr16	-	3986	9	FSM	ENSG00000150394.14	ENST00000584337.5	3986	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.73329613076702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTCTCTGAAGAAA	-62036182	True	NA	NA	False	AATAAA	-43	NA	62036402	61725165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_36604.known	chr16	-	539	2	FSM	ENSG00000150394.14	ENST00000577228.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAACTGGAGATATC	-61918584	True	NA	NA	False	NA	NA	NA	61918714	61901391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_61901474_61918257
transcript_36609.nnic	chr16	-	658	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-90	1	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	322.5	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-65235008	False	NA	-105	True	AATAAA	-18	NA	65235023	65229844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65230206_65233014_65233174_65234885
transcript_3661.known	chr1	-	2229	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.83321838943783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	NA	False	NA	60	True	ATTAAA	-18	NA	45500079	45493865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_36611.nnic	chr16	-	768	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-1	-71	1	multi-exon	FALSE	canonical	3	371	junction_2	268.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-65231440	True	NA	-105	True	AATAAA	-18	NA	65235004	65229844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_65230206_65233014_65233303_65234885
transcript_36614.nnic	chr16	-	400	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-10	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65231440	True	NA	-29	True	AATAAA	-17	NA	65235004	65227904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65228022_65228302_65228467_65234885
transcript_36615.nnic	chr16	-	339	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-72	-10	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	91.5	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65234990	False	NA	-29	True	AATAAA	-17	NA	65235005	65227904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65228022_65233014_65233117_65234885
transcript_36616.nnic	chr16	-	411	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-87	-10	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	193.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65235005	False	NA	-29	True	AATAAA	-17	NA	65235020	65227904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65228022_65233014_65233174_65234885
transcript_36617.nnic	chr16	-	525	3	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-72	-10	combination_of_known_splicesites	FALSE	canonical	3	371	junction_2	139.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65234990	False	NA	-29	True	AATAAA	-17	NA	65235005	65227904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_65228022_65233014_65233303_65234885
transcript_36620.nnic	chr16	-	587	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-72	5	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	220.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65234990	False	NA	-101	True	AATAAA	-22	NA	65235005	65229840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_36621.nnic	chr16	-	1355	3	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-71	5	combination_of_known_junctions	FALSE	canonical	3	133	junction_2	387.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65231440	True	NA	-101	True	AATAAA	-22	NA	65235004	65229840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_65230206_65233014_65233886_65234885
transcript_36623.known	chr16	-	146	2	FSM	ENSG00000260834.2	ENST00000565901.1	146	2	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	-65234889	False	NA	-19	True	AATAAA	-27	NA	65234904	65227894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_65228022_65234885
transcript_36624.nnic	chr16	-	620	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-207	5	combination_of_known_splicesites	FALSE	canonical	3	1386	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235140	65229840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_65230206_65234885
transcript_3663.known	chr1	-	2095	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.96865172858795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	NA	False	NA	60	True	ATTAAA	-18	NA	45500073	45493865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_36630.known	chr16	+	508	3	FSM	ENSG00000217555.13	ENST00000351137.8	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	67	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66563121_66563218_66565885
transcript_36631.nic	chr16	+	550	3	NIC	ENSG00000217555.13	novel	656	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	168.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	66550068	True	NA	31	True	ATTAAA	-21	NA	66552572	66566068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_66552794_66563071_66563218_66565885
transcript_36632.known	chr16	+	412	2	FSM	ENSG00000217555.13	ENST00000362093.4	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66565885
transcript_36633.known	chr16	+	656	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	90.149258948085	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	66550071	True	NA	31	True	ATTAAA	-21	NA	66552575	66566068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
transcript_36634.known	chr16	+	571	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	54.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66558189_66558349_66565885
transcript_36636.known	chr16	-	4326	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_9	29.6436005835249	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTTCTTTAT	-66744099	True	NA	-3	True	AATAAA	-23	NA	66751609	66720892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_36641.known	chr16	-	1502	12	FSM	ENSG00000135720.13	ENST00000443351.6	1502	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	83.7435084446046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCACATCTGGGCTTC	-66744091	True	NA	NA	False	NA	NA	NA	66751601	66723477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66749196_66749314_66751272_66751347_66751484
transcript_36650.known	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_20	328.570764828522	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-66814340	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
transcript_36651.known	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_19	81.3157383750478	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-66814340	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_36660.known	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	265.255851333513	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-66814319	True	NA	NA	False	NA	NA	NA	66830955	66802911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_3668.known	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2914.58042263376	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	-45293173	True	NA	-14	True	ATTAAA	-28	NA	45521938	45511035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
transcript_36688.known	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	66875756	True	NA	4	True	ATTAAA	-24	NA	66880514	66891101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66880641_66884230
transcript_36691.known	chr16	-	668	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	577.952149835953	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTTGGTG	-66923482	True	NA	-11	True	AATAAA	-16	NA	66934402	66932064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_36695.known	chr16	-	696	6	FSM	ENSG00000166595.12	ENST00000567511.1	696	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	672.114990161654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCCAGCATGCCTTGG	-66923442	True	NA	-13	True	AATAAA	-14	NA	66934362	66932066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66932301_66932480_66932551_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_36696.known	chr16	+	2871	12	FSM	ENSG00000172831.14	ENST00000317091.10	2871	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3202809298435	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTGCCTCTCCCC	66935504	False	NA	6	True	AATAAA	-18	NA	66935515	66945096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_36699.known	chr16	+	2124	12	FSM	ENSG00000172824.16	ENST00000540579.6	2124	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.987525499200019	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCCACCTATAAAATGG	67000507	True	NA	NA	False	AATAAA	-22	NA	67000538	67009741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67000780_67000856_67000991_67001307_67001462_67003069_67003175_67003255_67003361_67003514_67003554_67004083_67004225_67004792_67004874_67005239_67005394_67006390_67006520_67006744_67006818_67008973
transcript_367.known	chr1	-	1798	15	FSM	ENSG00000127054.22	ENST00000419704.5	1798	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	137.881511539763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	-1318730	True	NA	-23	True	AGTAAA	-9	NA	1324653	1311605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1320995_1321094_1324580
transcript_36701.known	chr16	+	2818	6	FSM	ENSG00000067955.15	ENST00000651988.1	2818	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	230.062947907741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTCTGTGTAGTAA	67028970	False	NA	49	True	NA	NA	NA	67028983	67101035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67029028_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_36702.nic	chr16	+	2818	6	NIC	ENSG00000067955.15	novel	3103	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	222.019818935157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	67025959	True	NA	72	True	AATAAA	-18	NA	67029097	67101058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
transcript_36703.known	chr16	+	584	6	FSM	ENSG00000067955.15	ENST00000561924.6	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	218.611619087367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATTGCTTCTAG	67025977	True	NA	NA	False	NA	NA	NA	67029115	67098811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_36706.nic	chr16	+	2488	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	-9	-324	intron_retention	FALSE	canonical	3	63	junction_1	32.0134249183058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTACAGCCTCATCCT	67107428	True	NA	7	True	NA	NA	NA	67109931	67148220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_36707.nic	chr16	+	2812	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	63	junction_1	32.0134249183058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	67107428	True	NA	14	True	NA	NA	NA	67109931	67148544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_36708.known	chr16	+	1353	17	FSM	ENSG00000125149.12	ENST00000569600.5	1353	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.8134320926996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCACCACCCATGCCC	67107459	True	NA	NA	False	NA	NA	NA	67109962	67147131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67109990_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_3671.known	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_5	2737.19976618441	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	-45293173	True	NA	NA	False	NA	NA	NA	45521938	45510913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
transcript_36711.known	chr16	+	1351	4	FSM	ENSG00000140939.14	ENST00000568146.1	1351	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.25967446224258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	67173915	False	NA	21	True	AATATA	-30	NA	67174001	67175735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67174047_67174161_67174455_67174620_67174945_67175046
transcript_36712.known	chr16	+	1592	6	FSM	ENSG00000140939.14	ENST00000564053.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.403845442912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGACTTCTCT	67170410	True	NA	NA	False	NA	NA	NA	67170539	67175485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67170575_67171151_67171458_67173861_67174047_67174161_67174465_67174620_67174945_67175046
transcript_36713.nic	chr16	+	1460	4	ISM	ENSG00000140939.14	ENST00000564053.5	1592	6	3363	-250	-48	0	3prime_fragment	FALSE	canonical	3	18	junction_3	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	67173816	True	NA	21	True	AATATA	-30	NA	67173902	67175735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_67174047_67174161_67174465_67174620_67174945_67175046
transcript_36714.known	chr16	+	1394	4	FSM	ENSG00000140939.14	ENST00000268605.11	1394	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	NA	False	NA	21	True	AATATA	-30	NA	67170496	67175735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67170575_67174161_67174465_67174620_67174945_67175046
transcript_36715.known	chr16	+	2110	10	FSM	ENSG00000205250.9	ENST00000379378.8	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	312.491580133483	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATGTGGTTCTTTGG	67186482	True	NA	21	True	AATAAA	-18	NA	67192154	67198918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67192363_67192760_67192871_67193008_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_36717.known	chr16	+	2486	20	FSM	ENSG00000102890.16	ENST00000393997.8	2486	20	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	12.4375448049695	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	67198089	True	NA	6	True	AATAAA	-20	NA	67199130	67204004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_3672.known	chr1	-	1296	6	FSM	ENSG00000117450.15	ENST00000424390.2	1296	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_5	2674.48429421449	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	-45523012	False	NA	NA	False	NA	NA	NA	45523047	45510913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45522777
transcript_36722.known	chr16	+	776	6	FSM	ENSG00000168701.19	ENST00000304800.14	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	55.3953066604022	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223971	True	NA	25	True	AATAAA	-15	NA	67227129	67229278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_36724.known	chr16	+	775	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	241.811165995287	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223998	True	NA	25	True	AATAAA	-15	NA	67227156	67229278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
transcript_36727.known	chr16	+	887	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	253.17630220856	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	67223961	True	NA	9	True	NA	NA	NA	67227119	67229262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_36729.known	chr16	+	832	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	61.9273768215641	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67224009	True	NA	25	True	AATAAA	-15	NA	67227167	67229278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
transcript_36731.known	chr16	+	915	5	FSM	ENSG00000168701.19	ENST00000567193.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_1	35.6467039149484	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTATACTTATACTC	67223944	True	NA	-28	True	NA	NA	NA	67227102	67229225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228882_67228975
transcript_36733.known	chr16	+	698	4	FSM	ENSG00000168701.19	ENST00000561586.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_1	37.853518844209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACCGTTTCTCTTGTAGG	67223986	True	NA	NA	False	NA	NA	NA	67227144	67228956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494
transcript_36734.known	chr16	-	3813	22	FSM	ENSG00000135723.14	ENST00000258201.9	3813	22	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_18	26.6719382544545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245084	True	NA	-1	True	AATAAA	-20	NA	67247481	67229388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_36735.known	chr16	-	1021	4	FSM	ENSG00000159713.11	ENST00000393957.7	1021	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTGGTTGACGATGA	-67393465	False	33	0	True	AATAAA	-18	NA	67393498	67389808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67390363_67390478_67390633_67390923_67391118_67393379
transcript_36737.nic	chr16	+	1674	5	NIC	ENSG00000176387.7	novel	540	4	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	73.6796274420548	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	67430342	True	NA	19	True	AATAAA	-25	NA	67430608	67437553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_36739.known	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	159.900719197882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	-67474980	True	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
transcript_36740.known	chr16	-	1636	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	0	0	0	multi-exon	TRUE	canonical	3	371	junction_6	22.2435498561736	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCTGTCTCGTTTAG	-67475058	True	NA	-5	True	AATAAA	-21	NA	67481157	67438018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
transcript_36741.known	chr16	+	696	2	FSM	ENSG00000270049.4	ENST00000602596.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTGTAGTAG	67481335	True	NA	NA	False	AATAAA	-17	NA	67481383	67484669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67481520_67484109
transcript_36742.known	chr16	+	3975	11	FSM	ENSG00000102974.16	ENST00000642819.1	3975	11	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	39.5418765361484	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTAACAAGTGCTCCAA	67570747	False	NA	-2	True	AATAAA	-7	NA	67570772	67639162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
transcript_36743.known	chr16	-	798	2	FSM	ENSG00000261386.2	ENST00000605277.1	798	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCCCTGCTTTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	67563958	67549213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67549348_67563294
transcript_36750.known	chr16	-	2065	12	FSM	ENSG00000102977.17	ENST00000620338.4	2065	12	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	33.3850562897694	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGCCGCCGCCTCTTT	-67660536	False	NA	-6	True	AATAAA	-36	NA	67660815	67657512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660046_67660121
transcript_36752.nnic	chr16	-	1527	12	NNC	ENSG00000102977.17	novel	2065	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	109.625659058301	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGGAGAGGATCAGGG	-67656856	True	NA	-26	True	AATAAA	-16	NA	67660315	67657532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659719_67659796_67659902_67660046_67660121
transcript_36764.known	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	22.4746384843005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	-67656822	True	NA	-56	True	NA	NA	NA	67660281	67657562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
transcript_36768.known	chr16	+	1244	3	FSM	ENSG00000102981.10	ENST00000458121.7	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	45	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	67659635	True	NA	12	True	ATTAAA	-18	NA	67660959	67662774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67661102_67661454_67661678_67661895
transcript_36770.known	chr16	+	1266	4	FSM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.98887651569859	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	67666570	True	NA	5	True	AATAAA	-18	NA	67666813	67668755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668199
transcript_36771.known	chr16	-	1253	4	FSM	ENSG00000124074.12	ENST00000602942.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.71722460186015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTCCATAAGAGCTT	-67664233	False	NA	-1	True	ATTAAA	-16	NA	67664512	67662945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936
transcript_36772.nnic	chr16	-	879	4	NIC	ENSG00000124074.12	novel	1253	4	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	24.2395452835971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTCCATAAGAGCTT	-67665993	False	NA	-1	True	ATTAAA	-16	NA	67666272	67662945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_67663322_67663419_67663557_67663656_67663821_67666070
transcript_36775.nnic	chr16	-	717	3	NIC	ENSG00000124074.12	novel	735	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTCCATAAGAGCTT	-67665995	False	NA	-1	True	ATTAAA	-16	NA	67666274	67662945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_67663322_67663419_67663557_67666070
transcript_36777.known	chr16	-	2018	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	2.5	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGCATGTGGTTTTT	-67718280	True	NA	-4	True	AATAAA	-15	NA	67719316	67674535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67676054_67685456_67685803_67719162
transcript_36779.nnic	chr16	-	836	4	NNC	ENSG00000141084.12	novel	5245	14	NA	NA	0	-34677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.8607649252891	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACGTGTGTGGCAGTT	-67805668	True	NA	NA	False	NA	NA	NA	67806560	67770321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_67770734_67772033_67772087_67805427_67805540_67806301
transcript_36787.known	chr16	-	2580	16	FSM	ENSG00000102901.13	ENST00000562787.6	2580	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	170.81797979786	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	NA	False	NA	0	True	AATAAA	-16	NA	67847693	67828156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749_67834101_67835171_67835301_67835537_67835659_67847400
transcript_36803.known	chr16	-	1737	12	FSM	ENSG00000102901.13	ENST00000626059.2	1737	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	138.556847539196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATATTCTGCATTT	-67824819	True	NA	-8	True	AATAAA	-8	NA	67833896	67828164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832454_67832546_67833749
transcript_36806.known	chr16	-	2133	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_5	60.6615049419167	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	-67824820	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_36819.known	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	TRUE	canonical	3	377	junction_9	28.2055944017416	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-67824836	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
transcript_3682.known	chr1	+	5049	4	FSM	ENSG00000132763.15	ENST00000401061.9	5049	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAAGCTTTTCCATTA	45498377	True	NA	NA	False	AATAAA	-17	NA	45500299	45513382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795
transcript_36826.known	chr16	+	2120	5	FSM	ENSG00000102898.12	ENST00000219169.9	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	350.150681849972	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCTTTCTTCCAA	67832399	True	NA	23	True	AATAAA	-15	NA	67846932	67872567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_36829.known	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	1064.80338560694	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	67847041	False	NA	27	True	AATAAA	-29	NA	67847160	67871323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_36832.known	chr16	+	1876	1	FSM	ENSG00000168286.3	ENST00000303596.3	1876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTCTCGCCATTTTAT	67838489	True	NA	12	True	ATTAAA	-19	NA	67842319	67844195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67842300_67844200
transcript_36835.known	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884151	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67884983_67885721_67885855_67885973
transcript_36837.nnic	chr16	+	607	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	43.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884149	True	NA	28	True	ATTAAA	-17	NA	67884882	67886368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_67884983_67885742_67885855_67885973
transcript_3684.known	chr1	-	945	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	6804	junction_5	235.885056754344	16794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	-45293119	True	NA	-29	True	ATTAAA	-13	NA	45521884	45511050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
transcript_36842.known	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	355.400722381635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67936840	False	NA	NA	False	AATAAA	-20	NA	67936850	67934505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
transcript_36845.nic	chr16	-	678	4	ISM	ENSG00000261884.2	ENST00000573493.1	573	5	-117	3581	-117	-3581	5prime_fragment	FALSE	canonical	3	86	junction_2	309.483799611906	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67928298	True	NA	NA	False	AATAAA	-20	NA	67935758	67934505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_67934672_67934796_67934949_67935295_67935479_67935581
transcript_36846.known	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_2	15.1730755689881	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67935785	False	NA	NA	False	AATAAA	-20	NA	67935795	67934505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
transcript_36849.nic	chr16	-	646	3	ISM	ENSG00000205220.12	ENST00000570985.1	591	4	48	0	48	0	intron_retention	FALSE	canonical	3	723	junction_2	17	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67928287	True	NA	NA	False	AATAAA	-20	NA	67935747	67934505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_67934672_67934796_67934949_67935419
transcript_3685.nic	chr1	+	1492	11	NIC	ENSG00000117448.14	novel	1818	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	558.45676645556	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550779	45570049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_45550877_45550965_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_36852.known	chr16	+	185	2	FSM	ENSG00000159792.10	ENST00000575198.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTTTGCTTTG	67890252	True	NA	4	True	AATAAA	-17	NA	67893300	67903145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67893372_67903031
transcript_36853.known	chr16	-	3627	24	FSM	ENSG00000124067.17	ENST00000541864.6	3627	24	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_23	50.027213766132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	-67966526	False	NA	NA	False	NA	NA	NA	67966878	67944481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_36854.known	chr16	-	1240	5	FSM	ENSG00000213398.8	ENST00000570980.1	1240	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	15.8646619882051	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGCACCTGGTGTGGA	-67943615	False	NA	NA	False	NA	NA	NA	67943625	67940245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67940479_67942362_67942588_67942670_67942767_67942860_67942977_67943055
transcript_36856.known	chr16	-	673	5	FSM	ENSG00000124067.17	ENST00000576462.1	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	26.6774717692663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGGGCA	-67968117	False	NA	NA	False	TATAAA	-11	NA	67968469	67957528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_36857.known	chr16	-	1737	10	FSM	ENSG00000141096.6	ENST00000672962.1	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	3.57287448684745	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	67980549	67975663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67976002_67976092_67976229_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_36859.known	chr16	+	1982	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.8172854858649	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021330	True	NA	14	True	CATAAA	-1	NA	68023283	68079320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_36860.known	chr16	+	1933	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	27.0970273072322	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021299	True	NA	14	True	CATAAA	-1	NA	68023252	68079320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_36876.known	chr16	+	2694	6	FSM	ENSG00000103066.13	ENST00000219345.10	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	7.39188744503053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTGGCCTACATTCT	68244908	True	NA	8	True	AATAAA	-20	NA	68245372	68261058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255765_68255991_68259145
transcript_36877.known	chr16	+	1203	6	FSM	ENSG00000103066.13	ENST00000566188.5	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	26.4529771481397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTGTTGGCCTCTGG	68244908	True	NA	NA	False	NA	NA	NA	68245372	68259692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255890_68255991_68259145
transcript_36879.known	chr16	+	6308	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	34.3378931952866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	68262725	True	NA	3	True	AATAAA	-16	NA	68264559	68301819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_36880.known	chr16	+	6255	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_2	22.4501670372405	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	68262691	True	NA	3	True	AATAAA	-16	NA	68264525	68301819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_36882.nnic	chr16	+	1738	10	NIC	ENSG00000103064.15	novel	6255	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	9	junction_1	33.7324256941281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCATATAGTGGGGCTC	68262693	True	NA	3	True	ATTAAA	-14	NA	68264527	68297433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68264577_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_36885.known	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	12.4096736459909	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-68308547	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
transcript_36886.known	chr16	-	910	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTGACAACAAAATCT	-68308423	True	NA	NA	False	GATAAA	-25	NA	68310822	68303689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_68304233_68310334_68310614_68310734
transcript_36888.known	chr16	+	3738	19	FSM	ENSG00000132600.18	ENST00000441236.3	3738	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	67.7292403618998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATCTCAGCAAGTT	68306703	True	NA	20	True	ATTAAA	-19	NA	68311018	68358584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_36889.nic	chr16	+	2422	19	ISM	ENSG00000132600.18	ENST00000687654.1	4265	21	3	3593	0	0	5prime_fragment	FALSE	canonical	2	12	junction_1	72.8455155503924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306706	True	NA	5	True	AATAAA	-18	NA	68311021	68357259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_68311112_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_36890.known	chr16	+	4238	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	74.7389902705854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	68306818	True	NA	-11	True	AATACA	-9	NA	68311133	68358553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_36893.nic	chr16	+	2296	18	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	43.8194628985765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306685	True	NA	5	True	AATAAA	-18	NA	68311000	68357259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_36896.nic	chr16	+	2287	18	NIC	ENSG00000132600.18	novel	4265	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	62.9416712459937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306706	True	NA	5	True	AATAAA	-18	NA	68311021	68357259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311112_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_3690.known	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	409.810465073735	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_36901.nic	chr16	+	2259	17	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	71.5534928829474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306685	True	NA	5	True	AATAAA	-18	NA	68311000	68357259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311100_68315896_68316075_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_36909.nic	chr16	+	2074	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	68.2450940151954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306685	True	NA	5	True	AATAAA	-18	NA	68311000	68357259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_36918.known	chr16	+	1723	11	FSM	ENSG00000132600.18	ENST00000565356.5	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_10	74.9143510951006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATAAATTAAGCGT	68306748	True	NA	-22	True	NA	NA	NA	68311063	68352660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247
transcript_36920.known	chr16	+	695	5	FSM	ENSG00000184939.16	ENST00000611381.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	15.9275704361965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	68538448	True	NA	NA	False	NA	NA	NA	68539315	68576040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_36923.nic	chr16	+	421	3	NIC	ENSG00000184939.16	novel	199	2	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGTTTTTCTTTTGC	68538417	True	NA	23	True	AATAAA	-37	NA	68539284	68555240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68539470_68539757_68539826_68555072
transcript_36925.known	chr16	+	4452	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_9	56.7217771230768	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	68629439	True	NA	5	True	AATAAA	-16	NA	68645309	68700292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_36927.nic	chr16	+	1360	8	ISM	ENSG00000062038.15	ENST00000429102.6	3611	16	283	17680	-25	-1036	5prime_fragment	FALSE	canonical	3	813	junction_7	55.6666462992345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTGATATGAAAATCTT	68629405	True	NA	22	True	AATGAA	-41	NA	68645275	68681356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967
transcript_36929.nic	chr16	+	1868	8	ISM	ENSG00000062038.15	ENST00000429102.6	3611	16	283	17172	-25	-528	5prime_fragment	FALSE	canonical	3	813	junction_7	55.6666462992345	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTCCGAGCAACTG	68629405	True	NA	8	True	AATAAA	-20	NA	68645275	68681864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967
transcript_3693.known	chr1	+	1818	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_1	506.487687686263	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550542	45570049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_36931.known	chr16	+	4811	16	FSM	ENSG00000039068.20	ENST00000261769.10	4811	16	0	0	0	0	multi-exon	TRUE	canonical	3	975	junction_10	57.8682027445893	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAAATTTGTTTTA	68708067	True	NA	13	True	ATTAAA	-14	NA	68737291	68835537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68819279_68819426_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
transcript_36932.known	chr16	+	4893	18	FSM	ENSG00000103047.8	ENST00000261778.2	4893	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	9.86307643773529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTCCACGCAACCCAC	68841964	True	NA	14	True	AATAAA	-28	NA	68843530	69085182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078_68867221_68875153_68875291_68878117_68878281_68880547_68880631_68900433_68900547_68902327_68902505_68907442_68907576_68909210_68909403_68919084_68919220_68927567_68928084_68930237_68930296_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_36934.known	chr16	+	542	5	FSM	ENSG00000103047.8	ENST00000562000.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	28.2787464361488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTGAAGCACGTAGTG	NA	False	NA	NA	False	NA	NA	NA	68973039	69083515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68973144_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_36935.nnic	chr16	+	1055	2	NNC	ENSG00000103047.8	novel	4893	18	NA	NA	45959	368	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGGCTAAATCTGGTC	NA	False	NA	5	True	AATAAA	-18	NA	69072533	69084214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_69072859_69083484
transcript_36936.nnic	chr16	+	2023	2	NNC	ENSG00000103047.8	novel	4893	18	NA	NA	45959	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTCCACGCAACCCAC	NA	False	NA	14	True	AATAAA	-28	NA	69072533	69085182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_69072859_69083484
transcript_36940.nnic	chr16	+	2118	17	NNC	ENSG00000141076.18	novel	2188	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	25	junction_16	235.078834848546	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124561	True	NA	NA	False	AATAAA	-16	NA	69132595	69169021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167124_69168881
transcript_36941.known	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_8	88.5465758442979	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124614	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_36945.known	chr16	+	2186	17	FSM	ENSG00000141076.18	ENST00000562237.5	2186	17	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	214.783893934694	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	69124561	True	NA	NA	False	AATAAA	-15	NA	69132595	69169020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69132690_69133511_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_36947.nic	chr16	+	2117	16	ISM	ENSG00000141076.18	ENST00000314423.12	2188	17	-53	1759	0	-580	5prime_fragment	FALSE	canonical	3	787	junction_8	91.0147729156585	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGAGCACCTTCAGTTT	69124561	True	NA	NA	False	AATAAA	-15	NA	69132595	69167262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074
transcript_36953.nic	chr16	+	2074	16	NIC	ENSG00000141076.18	novel	2188	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_1	240.302827467529	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124567	True	NA	NA	False	AATAAA	-16	NA	69132601	69169021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_69132690_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_36970.known	chr16	+	4191	4	FSM	ENSG00000103044.11	ENST00000569188.6	4191	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4447831962576	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69104967	True	NA	14	True	AATAAA	-22	NA	69105652	69117660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69105788_69109395_69110032_69113440_69113543_69114342
transcript_36971.known	chr16	+	900	4	FSM	ENSG00000103044.11	ENST00000566118.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4722086720835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTCAACGTGGAGCGG	69106346	True	NA	NA	False	NA	NA	NA	69106608	69114397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69106716_69109395_69110032_69113440_69113543_69114342
transcript_36975.known	chr16	-	1073	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	148.302243932975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACCAAACCCCAATCT	-69132127	False	NA	NA	False	NA	NA	NA	69132146	69119810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
transcript_36976.known	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	69.5956575912287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132569	False	NA	-10	True	AATAAA	-15	NA	69132588	69118009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
transcript_36978.nic	chr16	-	1246	4	NIC	ENSG00000168802.14	novel	1073	4	NA	NA	-72	-1	combination_of_known_splicesites	FALSE	canonical	3	173	junction_3	55.7215298505783	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCACTGTGTTT	-69132199	False	NA	-11	True	AATAAA	-14	NA	69132218	69118010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_69118526_69120106_69120650_69121435_69121494_69132088
transcript_36980.known	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	61	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132132	False	3899	-10	True	AATAAA	-15	NA	69132151	69118009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69120650_69121435_69121494_69132088
transcript_36985.known	chr16	+	4106	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_6	31.3949040450835	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	69302743	True	NA	NA	False	AATAAA	-19	NA	69311349	69326939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
transcript_36988.known	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_4	27.233940221716	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	69334378	True	NA	17	True	AATAAA	-30	NA	69339771	69343106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
transcript_36997.known	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	210.086225684175	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	69334403	True	NA	15	True	AATAAA	-28	NA	69339796	69343104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
transcript_37.known	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00095_+_0_500
transcript_37003.known	chr16	+	4262	5	FSM	ENSG00000103018.18	ENST00000307892.13	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	22.7087538187369	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	69406770	True	NA	25	True	AATAAA	-18	NA	69424618	69466264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462429
transcript_37005.known	chr16	+	823	5	FSM	ENSG00000103018.18	ENST00000687780.1	1446	5	0	623	0	140	multi-exon	FALSE	canonical	1	4	junction_4	351.593781941604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCTTTTAAGTAAATT	69406831	True	NA	86	True	NA	NA	NA	69424679	69462918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462461
transcript_37007.known	chr16	+	2492	3	FSM	ENSG00000103018.18	ENST00000514123.5	2492	3	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	26	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACTATTGAGC	69406770	True	NA	NA	False	NA	NA	NA	69424618	69450238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69424858_69447149_69447279_69448114
transcript_37008.known	chr16	+	1658	3	FSM	ENSG00000103018.18	ENST00000688840.1	4203	3	59	2486	-2	-26	multi-exon	FALSE	canonical	0	0	junction_2	415	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAAAATACTGGCGGT	69406829	True	NA	2	True	NA	NA	NA	69424677	69463778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69424858_69447149_69447279_69462429
transcript_37009.known	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	29.9492904757358	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	-69721466	True	NA	0	True	AATAAA	-26	NA	69726560	69709400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_3701.known	chr1	+	1407	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	203.119692238345	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45538057	True	NA	27	True	AATAAA	-17	NA	45550825	45570049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_37010.known	chr16	-	2527	5	FSM	ENSG00000181019.13	ENST00000379047.7	2527	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	119.534513844329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	NA	False	NA	0	True	AATAAA	-26	NA	69726668	69709400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69711282_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_37011.known	chr16	-	1105	5	FSM	ENSG00000181019.13	ENST00000379046.6	1105	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	118.113028493896	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTCTTTAAAGGCA	-69721490	True	NA	NA	False	NA	NA	NA	69726584	69710726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69711282_69713027_69713130_69718122_69718254_69718369_69718535_69726432
transcript_37013.known	chr16	-	924	4	FSM	ENSG00000181019.13	ENST00000439109.6	924	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	142.364165278892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATCCGACTGGGCTCAA	-69721466	True	NA	52	True	NA	NA	NA	69726560	69710781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69711282_69718122_69718254_69718369_69718535_69726432
transcript_37014.known	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	491	junction_4	23.7983061372023	555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	-69749202	True	NA	-17	True	AATAAA	-15	NA	69754926	69741870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_37022.nic	chr16	+	2502	9	ISM	ENSG00000198373.13	ENST00000359154.7	4487	24	-23	31489	-19	0	5prime_fragment	FALSE	canonical	3	133	junction_1	32.6716620330218	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	69757597	True	NA	2	True	AATAAA	-13	NA	69762308	69910250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_37023.known	chr16	-	2764	25	FSM	ENSG00000196696.13	ENST00000530079.5	2764	25	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	73.6969088564778	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCACACTCCAAAAACAAA	-70064440	True	NA	NA	False	AAGAAA	-44	NA	70065853	69976351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69976733_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
transcript_37024.known	chr16	-	3489	21	FSM	ENSG00000090861.17	ENST00000676212.1	3489	21	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	275.761287166999	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255719_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37025.known	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_20	268.487518331858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	-70289569	False	NA	NA	False	NA	NA	NA	70289580	70251982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
transcript_37026.known	chr16	-	3527	21	FSM	ENSG00000090861.17	ENST00000675853.1	3527	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	273.941398842891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTGCTGGCTGCTGT	-70270574	True	NA	-32	True	AATAAA	-6	NA	70289557	70252306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253665_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37027.known	chr16	-	3441	21	FSM	ENSG00000090861.17	ENST00000676209.1	3441	21	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_10	274.128049458643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270572	True	NA	-28	True	AATAAA	-10	NA	70289555	70252302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262485_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37030.known	chr16	-	3296	20	FSM	ENSG00000090861.17	ENST00000676168.1	3296	20	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	266.787236131868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37038.known	chr16	+	1765	12	FSM	ENSG00000157349.17	ENST00000563206.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	169.773354020992	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	NA	False	NA	11	True	AATACA	-16	NA	70294776	70333823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70294918_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37039.known	chr16	+	3275	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	131.601389125779	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGCAGACTCCCAC	70292672	True	NA	96	True	ATTAAA	-26	NA	70299185	70335305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37040.known	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	TRUE	canonical	3	303	junction_4	117.286750394841	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	70340812	True	NA	16	True	AATATA	-18	NA	70346902	70373383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_37044.known	chr16	+	1692	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	174.669087133356	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	70292680	True	NA	11	True	AATACA	-16	NA	70299193	70333823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37047.known	chr16	+	1717	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.773599840692	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	70292648	True	NA	14	True	AATACA	-19	NA	70299161	70333826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37050.known	chr16	+	1790	9	FSM	ENSG00000157349.17	ENST00000562519.5	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	223.095131053997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAGTGGTGGAAAGGG	70299124	False	NA	NA	False	NA	NA	NA	70299141	70333972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37055.known	chr16	+	707	5	FSM	ENSG00000157349.17	ENST00000569224.1	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	13.2382022948737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGAAAGAGAAAAAGAGGAG	70292820	False	NA	NA	False	AAGAAA	-10	NA	70299333	70317942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495
transcript_37059.known	chr16	-	887	3	FSM	ENSG00000261777.6	ENST00000570278.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAATAATTTTTTTCT	-70346635	True	NA	NA	False	NA	NA	NA	70346747	70333782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70333961_70341939_70342100_70346198
transcript_37061.known	chr16	-	2820	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_11	30.0848594052241	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTGCTGTTACC	-70516977	True	NA	-3	True	AATAAA	-16	NA	70523554	70480570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_37064.known	chr16	-	2761	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	110.994965439614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-70516983	True	NA	-5	True	AATAAA	-14	NA	70523560	70480572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_37066.nic	chr16	-	660	4	ISM	ENSG00000103051.20	ENST00000564653.6	590	5	-12	1971	-2	-1864	5prime_fragment	FALSE	canonical	3	454	junction_3	24.9977776790036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTTTTTCTTTTTCT	-70516985	True	NA	NA	False	AATAAA	-21	NA	70523562	70514237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_70514510_70517625_70517741_70519648_70519732_70523372
transcript_37067.known	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_16	115.377613079835	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	70501743	True	NA	7	True	AATAAA	-18	NA	70523815	70577668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
transcript_37074.nnic	chr16	+	1753	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-26878	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	8.10349718742881	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	70619643	True	NA	36	True	ATTAAA	-18	NA	70619680	70660682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_70619813_70646547_70646976_70654537_70654672_70656601_70656680_70656962_70657122_70659617_70659754_70659996
transcript_37076.nnic	chr16	+	1815	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-24180	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.13770374382247	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	70622349	False	NA	36	True	ATTAAA	-18	NA	70622378	70660682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_70622570_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_37078.nnic	chr16	+	2070	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-22878	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	8.13770374382247	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	70623669	False	NA	36	True	ATTAAA	-18	NA	70623680	70660682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_70624130_70646547_70646976_70654537_70654672_70656601_70656680_70656962_70657122_70659617_70659754_70659996
transcript_37083.known	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-71288083	True	NA	-4	True	ATTAAA	-15	NA	71289402	71281391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71285940_71288877_71288938_71289135
transcript_37084.known	chr16	+	1454	11	FSM	ENSG00000172137.19	ENST00000302628.9	1454	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.17647603485372	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGTCTAGTGGTC	71358316	True	NA	8	True	AATAAA	-28	NA	71358722	71390433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71385576_71385649_71389748
transcript_37085.known	chr16	-	1947	5	FSM	ENSG00000157429.16	ENST00000569717.5	1947	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.76662979332984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGTTAGGTTTTCT	-71484263	True	NA	-7	True	AATAAA	-34	NA	71484613	71474748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71476273_71478227_71478342_71478878_71479101_71482081_71482144_71484588
transcript_37086.known	chr16	-	2612	5	FSM	ENSG00000157429.16	ENST00000565637.5	2612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.63680924774785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGTTTATTCAGTT	NA	False	NA	NA	False	ACTAAA	-22	NA	71489314	71474378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71484588_71484749_71488997
transcript_37088.known	chr16	-	3677	12	FSM	ENSG00000261611.6	ENST00000561908.1	3677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.587857751783	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTATGAGTACATTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	71489311	71447599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456071_71456122_71456763_71456829_71462209_71462371_71463545_71463649_71478227_71478342_71478878_71479006_71482081_71482144_71484588_71484749_71488997
transcript_37090.nic	chr16	-	3178	5	NIC	ENSG00000167377.19	novel	2627	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_3	14.8492424049175	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461311	True	NA	-2	True	AATAAA	-23	NA	71462247	71447596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763_71456829_71461658
transcript_37094.nic	chr16	-	3228	5	NIC	ENSG00000167377.19	novel	2627	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_3	15.188400179084	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461311	True	NA	-2	True	AATAAA	-23	NA	71462247	71447596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_71449886_71453242_71453351_71454041_71454219_71456763_71456829_71461658
transcript_37095.known	chr16	-	3186	5	FSM	ENSG00000167377.19	ENST00000357254.8	3186	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.6643713349804	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	NA	False	NA	-2	True	AATAAA	-23	NA	71462759	71447596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456763_71456829_71462209
transcript_37097.known	chr16	-	2358	3	FSM	ENSG00000167377.19	ENST00000539742.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATGAAAAATAAAGAT	-71461316	True	NA	-41	True	NA	NA	NA	71462252	71447635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449886_71456763_71456829_71462209
transcript_37098.known	chr16	-	3242	6	FSM	ENSG00000167377.19	ENST00000393539.6	3242	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.8679622641132	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461278	True	NA	-2	True	AATAAA	-23	NA	71462214	71447596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456071_71456122_71456763_71456829_71461658
transcript_37099.known	chr16	+	2412	3	FSM	ENSG00000140835.10	ENST00000338482.5	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTTCTTTCTTGTGT	NA	False	NA	NA	False	AATAGA	-13	NA	71525232	71538746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71525365_71526119_71526313_71536659
transcript_37101.known	chr16	+	2159	2	FSM	ENSG00000140835.10	ENST00000539698.4	2159	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTTCTTGTGTGA	71526314	False	NA	NA	False	AATAGA	-15	NA	71526425	71538748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71526496_71536659
transcript_37103.known	chr16	-	3593	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	52.03143589563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATGGAGTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71809201	71732384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_37104.known	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_22	22.251984775437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-71806174	False	2660	-1	True	AATAAA	-25	NA	71808834	71728999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_37107.known	chr16	+	1962	11	FSM	ENSG00000182149.21	ENST00000541571.6	1962	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	337.847243587986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTCTGTTGATCCTG	71893898	False	NA	NA	False	NA	NA	NA	71893933	71927973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71894482_71894720_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_37111.known	chr16	+	2356	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	266.27990471367	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	71891111	True	NA	23	True	AATAAA	-21	NA	71895542	71929010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
transcript_37113.nnic	chr16	+	2354	10	NNC	ENSG00000182149.21	novel	4561	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	275.809515588003	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTGCTTTCTCTACTG	71891067	True	NA	15	True	AATAAA	-13	NA	71895498	71929002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924810_71924818_71927613
transcript_37118.nic	chr16	+	2316	9	NIC	ENSG00000182149.21	novel	4561	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	290.945871254431	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGCTGCTAATAAAGTTA	71891074	True	NA	-13	True	NA	NA	NA	71895505	71928974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923385_71927613
transcript_37120.known	chr16	+	2255	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	261.558519981667	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	71891121	True	NA	21	True	AATAAA	-19	NA	71895552	71929008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
transcript_37131.known	chr16	+	7896	3	FSM	ENSG00000224470.9	ENST00000427980.7	7896	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTTGCGCCTTC	71841444	True	NA	19	True	TATAAA	-14	NA	71845975	71857328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71846105_71848009_71848072_71849623
transcript_37132.known	chr16	+	445	2	FSM	ENSG00000224470.9	ENST00000565676.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTAAAAGAAAGCACAAAG	71841537	False	NA	NA	False	NA	NA	NA	71846068	71848418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71846105_71848009
transcript_37137.known	chr16	+	4669	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	0	0	0	0	multi-exon	FALSE	canonical	2	180	junction_7	33.843158466668	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	72006567	True	NA	5	True	AATATA	-14	NA	72008743	72027659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
transcript_37140.nic	chr16	+	1111	5	ISM	ENSG00000102967.12	ENST00000219240.9	4669	9	-9	5972	-9	456	5prime_fragment	FALSE	canonical	3	220	junction_4	17.0953209972788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTGGCTCATGCCTGTA	72006558	True	NA	NA	False	AATAAA	-19	NA	72008734	72021687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123
transcript_37141.known	chr16	+	607	5	FSM	ENSG00000102967.12	ENST00000574309.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	100.641380654282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTCAGGCAAGCCTTT	72006592	True	NA	NA	False	NA	NA	NA	72008768	72024238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72024144
transcript_37143.known	chr16	+	4323	27	FSM	ENSG00000140829.12	ENST00000268482.8	4323	27	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	40.2464302507563	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTCTGACTTTTTCC	72090558	True	NA	22	True	AATAAA	-22	NA	72093846	72112912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_37144.nnic	chr16	-	916	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	27.1825107171668	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72093619	False	NA	-3	True	AATAAA	-17	NA	72093642	72084856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
transcript_37145.known	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	21.0765799460496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72092251	True	NA	-3	True	AATAAA	-17	NA	72093620	72084856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
transcript_37148.nic	chr16	+	1165	3	ISM	ENSG00000140829.12	ENST00000268482.8	4323	27	-12	15485	-12	515	5prime_fragment	FALSE	canonical	3	116	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCACTAGTATTTTTTGA	72090546	True	NA	NA	False	ATTAAA	-20	NA	72093834	72097427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_72094052_72096138_72096481_72096821
transcript_37154.known	chr16	-	436	7	FSM	ENSG00000261008.8	ENST00000655530.1	436	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.95298686029343	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-72663609	True	NA	-8	True	AATAAA	-27	NA	72664977	72521007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_72521042_72522552_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_37158.nnic	chr16	+	734	4	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	-1	-9384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.12825877028341	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	72664275	True	NA	NA	False	AATAAA	-17	NA	72665126	72812308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_72665334_72713332_72713417_72745404_72745467_72811927
transcript_37160.known	chr16	+	1395	8	FSM	ENSG00000103035.11	ENST00000568717.1	1395	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	912.252225236518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGAATGGAGACTGAT	74274110	True	NA	117	True	NA	NA	NA	74296819	74305888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74296989_74299575_74299746_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_37162.known	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	143.623350005028	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	74274104	True	NA	21	True	ATTAAA	-16	NA	74296813	74306288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_37171.known	chr16	+	931	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	157.319293158849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGTGTCCTTCTCAAC	74274119	True	NA	1	True	AATAAA	-18	NA	74296828	74304709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
transcript_37174.known	chr16	-	8261	27	FSM	ENSG00000090863.12	ENST00000205061.9	8261	27	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	152.140958659314	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTGGTGACTGGG	-74594306	True	NA	-1	True	AATAAA	-27	NA	74607114	74447426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_37175.known	chr16	-	9287	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_19	50.0039358450912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGTTAAATCTTCTC	-74594306	True	NA	-14	True	AATAAA	-14	NA	74607114	74447439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_37185.nnic	chr16	-	584	3	NNC	ENSG00000168411.14	novel	458	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661290	True	NA	-11	True	AATAAA	-15	NA	74666882	74621398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_74621805_74664664_74664746_74666785
transcript_37187.known	chr16	-	841	3	FSM	ENSG00000168411.14	ENST00000575397.5	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	18	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCACAAAGTAATGAA	-74661240	True	NA	NA	False	AATAAA	-11	NA	74666832	74660779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74661452_74664623_74664746_74666785
transcript_37191.known	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	5.97411081249754	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	-74700492	True	NA	-1	True	AATAAA	-22	NA	74700862	74671854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
transcript_37195.known	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_2	21.8771427521969	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	-74981341	True	NA	1	True	ATTAAA	-18	NA	74985083	74908732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37197.nic	chr16	-	1588	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-53	3385	-13	0	5prime_fragment	FALSE	canonical	3	167	junction_7	12.7148983107713	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGAGATTCGGAAGT	-74981394	True	NA	-8	True	AGTAAA	-17	NA	74985136	74912117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37199.nic	chr16	-	1482	14	NIC	ENSG00000103091.15	novel	550	7	NA	NA	-13	101	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	51.3039440448414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCCTGTAATTCCAACT	-74981394	True	NA	NA	False	NA	NA	NA	74985136	74915578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_74915718_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37200.nic	chr16	-	1452	10	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-53	12767	-13	2450	5prime_fragment	FALSE	canonical	3	167	junction_3	10.6851691379301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACAGATGATGTGA	-74981394	True	NA	NA	False	AAAAAG	-9	NA	74985136	74921499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37201.nnic	chr16	+	605	5	NNC	ENSG00000186187.12	novel	2046	2	NA	NA	-365	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	157.328279403291	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATATAAAAA	74998560	True	NA	-5	True	TTTAAA	-9	NA	74998658	75108004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_74998700_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_37203.known	chr16	+	4626	5	FSM	ENSG00000186187.12	ENST00000335325.9	4626	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	8.78564169540279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCAGGTTGGTGTAAC	74994847	True	NA	NA	False	NA	NA	NA	74999023	75110994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75000096_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_37205.known	chr16	-	2007	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37631344236401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTGGAAGTCAGCAGG	-75116470	True	NA	-9	True	AATAAA	-29	NA	75116780	75111863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_37207.known	chr16	-	2067	11	FSM	ENSG00000166816.15	ENST00000300051.8	2067	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	11.6451706728583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	-75116457	True	NA	-5	True	AATAAA	-33	NA	75116767	75111859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_37211.known	chr16	+	3287	4	FSM	ENSG00000184517.12	ENST00000570010.6	3287	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTTTGTATATG	75147843	True	NA	8	True	AATAAA	-15	NA	75148523	75172234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75148644_75152908_75152967_75166769_75166897_75169252
transcript_37218.known	chr16	-	608	4	FSM	ENSG00000153774.9	ENST00000565646.5	608	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	468.027776953462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAATGTTCCTTCAGCTC	-75418920	True	NA	NA	False	AAGAAA	-8	NA	75433473	75395134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75433288
transcript_37219.known	chr16	-	1293	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_4	96.6443939858329	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTCGCTCACCTTCCCT	-75418950	True	NA	17	True	AATAAA	-41	NA	75433503	75293709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_37220.known	chr16	-	1167	5	FSM	ENSG00000153774.9	ENST00000566901.5	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	59.9723894804934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75418908	True	NA	NA	False	NA	NA	NA	75433461	75394681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_37224.known	chr16	-	4959	3	FSM	ENSG00000166822.13	ENST00000357613.8	4959	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	-75460560	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451737_75451840_75464467
transcript_37225.known	chr16	-	5028	3	FSM	ENSG00000166822.13	ENST00000561878.2	5028	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	-75460560	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451668_75451840_75464467
transcript_37226.known	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	55.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	-75464394	False	4129	5	True	NA	NA	NA	75464416	75445713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451668_75451840_75464231
transcript_37236.nnic	chr16	-	925	3	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	0	57	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	8	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTGTGGTGGTTT	-75493311	True	NA	0	True	AATAAA	-23	NA	75495445	75473123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_75473468_75481816_75481892_75494939
transcript_37239.known	chr16	-	1869	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	15.9172862008572	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGACTTCCATTGTGT	-75620966	True	NA	-77	True	NA	NA	NA	75623300	75600001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
transcript_37243.known	chr16	-	4247	7	FSM	ENSG00000205084.12	ENST00000258173.11	4247	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.989442215108	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTGGTTTATTTCCT	-75555446	True	NA	0	True	TATAAA	-17	NA	75556252	75536740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
transcript_37247.known	chr16	+	974	4	FSM	ENSG00000034713.8	ENST00000037243.7	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_1	6.54896090146283	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	75549190	True	NA	NA	False	AATAAA	-19	NA	75566378	75577881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75566521_75566851_75566908_75568036_75568210_75577278
transcript_37248.known	chr16	+	791	3	FSM	ENSG00000034713.8	ENST00000563744.1	791	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	315	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	75549200	True	NA	NA	False	AATAAA	-19	NA	75566388	75577881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75566521_75566851_75566908_75577278
transcript_37249.known	chr16	+	2274	1	FSM	ENSG00000034713.8	ENST00000565985.1	2274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	75575566	False	NA	NA	False	AATAAA	-19	NA	75575607	75577881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75575600_75577900
transcript_37250.known	chr16	+	639	3	FSM	ENSG00000166848.7	ENST00000569234.1	639	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	73.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGAGGCTACTTCCG	75647105	False	NA	NA	False	NA	NA	NA	75648395	75656433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75648683_75654272_75654398_75656206
transcript_37254.known	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_14	311.881158685255	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-75633567	True	NA	-21	True	AGTAAA	-3	NA	75647665	75627473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
transcript_37258.known	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_13	120.738016544307	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-75633567	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
transcript_37259.known	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	396.479507667168	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	-75633550	True	NA	-95	True	NA	NA	NA	75647648	75627769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
transcript_37284.known	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	8.18290901819151	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	77189471	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
transcript_37286.known	chr16	+	1057	11	FSM	ENSG00000205078.6	ENST00000378644.5	1057	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.9860827458704	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	77199387	False	NA	NA	False	NA	NA	NA	77199407	77213215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77199513_77206440_77206501_77208209_77208270_77208464_77208540_77209096_77209145_77209416_77209472_77211212_77211277_77212129_77212200_77212281_77212370_77212573_77212647_77212856
transcript_37288.known	chr16	+	899	5	FSM	ENSG00000140876.11	ENST00000564085.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	41.1885906532379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATTCACGAGGATT	77721826	True	NA	NA	False	CATAAA	-41	NA	77722513	77741969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77741581
transcript_37290.known	chr16	+	1096	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	43.1508980207828	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCATTTACCTTAT	77721826	True	NA	NA	False	AATAAA	-19	NA	77722513	77742260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
transcript_37294.known	chr16	+	678	3	FSM	ENSG00000140876.11	ENST00000568787.5	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	37.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGATGCTTCAGAATT	77721828	True	NA	NA	False	NA	NA	NA	77722515	77736249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77735827
transcript_37295.known	chr16	+	930	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	32.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	77721831	True	NA	NA	False	AATAAA	-17	NA	77722518	77742258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77741581
transcript_37296.known	chr16	+	3791	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	9.95536915438097	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	77787043	True	NA	18	True	AATAAA	-24	NA	77788563	77980107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
transcript_37298.known	chr16	+	710	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	28.082734909549	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	78096237	True	NA	7	True	AATAAA	-21	NA	78099678	78278696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
transcript_37299.known	chr16	+	448	4	FSM	ENSG00000186153.18	ENST00000565562.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	33.5095342982992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGTTCGGGGCCACTAC	78096292	True	NA	NA	False	GATAAA	-13	NA	78099733	78111992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78111819
transcript_37301.known	chr16	+	525	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	78096233	True	NA	6	True	AATAAA	-19	NA	78099674	78100199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78099700_78100200
transcript_37302.known	chr16	-	1799	2	FSM	ENSG00000287106.1	ENST00000669173.1	1799	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTGGATTTAATAAATG	-78275557	True	NA	NA	False	NA	NA	NA	78275607	78273496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_78275129_78275440
transcript_37303.known	chr16	-	2669	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCTGTGTGATTTTTT	-79600595	True	NA	NA	False	AATACA	-17	NA	79600737	79593837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_79594554_79598784
transcript_37304.known	chr16	+	999	3	FSM	ENSG00000260876.6	ENST00000668234.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCACTTCACATGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	79770420	79799090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_79770528_79797490_79797731_79798438
transcript_37308.known	chr16	+	3928	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_7	446.833179161978	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	80995248	True	NA	17	True	AATAAA	-19	NA	81007213	81031485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_37312.known	chr16	+	971	10	FSM	ENSG00000166451.14	ENST00000428963.6	971	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	459.246914409952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTAAGCACAGCTCC	80995278	True	NA	22	True	GATAAA	-13	NA	81007243	81028660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_37316.known	chr16	+	1699	10	FSM	ENSG00000166451.14	ENST00000439957.7	1699	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	436.82357938437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACATCAGTTAATTTTG	80995241	True	NA	3	True	AATAAA	-14	NA	81007206	81029309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_37325.known	chr16	+	1398	7	FSM	ENSG00000166451.14	ENST00000299572.9	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_6	149.707121481318	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTGTTTTATACCA	81006460	False	NA	25	True	AATAAA	-27	NA	81006551	81022885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022754
transcript_37335.known	chr16	-	663	6	FSM	ENSG00000103121.9	ENST00000565613.5	663	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	513.6736707288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAATCCGAAAAATAAATT	-80997719	True	NA	NA	False	AAGAAA	-17	NA	81006854	80976109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80978241_80978416_80980769_80980880_80981805_80981878_80997313_80997430_81006733
transcript_37337.known	chr16	-	640	6	FSM	ENSG00000103121.9	ENST00000565925.5	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	384.781808301796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-80997740	True	NA	NA	False	AATAAA	-43	NA	81006875	80976049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_37338.known	chr16	-	573	6	FSM	ENSG00000103121.9	ENST00000562713.3	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	381.877153021754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAGAGGAATCCGAAAA	-80997723	True	NA	NA	False	AAGAAA	-10	NA	81006858	80976116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_37348.nic	chr16	-	1084	5	NIC	ENSG00000103121.9	novel	871	6	NA	NA	-244	0	combination_of_known_junctions	FALSE	canonical	3	294	junction_2	420.336174983786	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	-81007089	True	NA	NA	False	AATAAA	-14	NA	81007141	80975801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81006733
transcript_37351.known	chr16	-	671	5	FSM	ENSG00000103121.9	ENST00000565650.5	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	472.307831292262	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAGGGCGTTTAGTAC	-80997759	True	NA	NA	False	NA	NA	NA	81006894	80975927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_37352.nic	chr16	-	818	5	NIC	ENSG00000103121.9	novel	573	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	467.998130338146	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	-80997763	True	NA	NA	False	AATAAA	-14	NA	81006898	80975801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_80976180_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_37353.known	chr16	-	1560	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	2111	junction_3	104.972317779498	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGACTCTGATAGTATT	-81087907	True	NA	NA	False	AATAAA	-34	NA	81096395	81081944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_37355.known	chr16	-	766	4	FSM	ENSG00000103121.9	ENST00000486645.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	501.355717585384	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	-80997760	True	NA	NA	False	AATAAA	-14	NA	81006895	80975801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80980769_80980880_80997313_80997430_81006733
transcript_37356.known	chr16	-	10072	4	FSM	ENSG00000103121.9	ENST00000219400.8	10072	4	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	144.693545890002	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCATTATTTTTT	-80997750	True	NA	NA	False	ATTAAA	-19	NA	81006885	80966447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_81006733
transcript_37357.known	chr16	-	424	4	FSM	ENSG00000103121.9	ENST00000564174.5	424	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	18.624953392932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAAAGACTCTGGGTT	-80997719	True	NA	NA	False	AATAAA	-33	NA	81006854	80976059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80997313_80997430_80998284_80998352_81006733
transcript_37359.known	chr16	-	612	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	400	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTCTCCTTTCTCT	-80997762	True	NA	NA	False	AATAAA	-12	NA	81006897	80975803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_81006733
transcript_37360.known	chr16	-	399	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	557	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-80997751	True	NA	NA	False	AATAAA	-43	NA	81006886	80976049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_37361.known	chr16	-	1488	7	FSM	ENSG00000166473.17	ENST00000531391.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTGGGATCTGCT	-81181282	True	NA	0	True	AATAAA	-16	NA	81181329	81170288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_81170806_81170942_81171075_81174719_81174915_81175604_81175751_81177806_81177984_81179644_81179787_81181150
transcript_37362.nic	chr16	-	1725	6	NIC	ENSG00000166473.17	novel	1608	6	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	2.4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGTGATGGGCTCTCA	-81141428	True	NA	NA	False	TATAAA	-18	NA	81141527	81123017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_81123785_81127760_81128067_81130458_81130645_81133562_81133701_81137436_81137534_81141296
transcript_37365.known	chr16	-	829	4	FSM	ENSG00000261235.1	ENST00000567021.1	829	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCATCTATCAGGAATA	-82139497	True	NA	-38	True	NA	NA	NA	82139631	82044370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82044609_82063092_82063254_82070802_82071190_82139588
transcript_37366.known	chr16	-	566	3	FSM	ENSG00000261235.1	ENST00000561826.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCTCATTTCTCC	NA	False	NA	-3	True	AATAAA	-14	NA	82063222	82044335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82044606_82052292_82052459_82063092
transcript_37382.known	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_3	22.4874965258474	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-82160584	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
transcript_37396.known	chr16	-	619	3	FSM	ENSG00000135698.10	ENST00000569599.5	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACGGAAAAATGTTACT	-82160559	True	NA	NA	False	NA	NA	NA	82170199	82151083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82151515_82164081_82164195_82170124
transcript_37397.known	chr16	-	392	2	FSM	ENSG00000135698.10	ENST00000569021.1	392	2	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCTTTTTTACATTG	-82160557	True	NA	NA	False	NA	NA	NA	82170197	82163875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82164195_82170124
transcript_3740.known	chr1	+	1018	4	FSM	ENSG00000117448.14	ENST00000471651.1	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	215.382347362906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAAGGCGGGCGGATCA	45548839	True	NA	NA	False	NA	NA	NA	45551067	45567588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868
transcript_37402.known	chr16	+	8649	4	FSM	ENSG00000230989.8	ENST00000433866.7	8649	4	0	0	0	0	multi-exon	FALSE	canonical	2	4786	junction_2	1121.4860181424	1371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTTATCTTTATTTT	83768688	True	NA	NA	False	ATTAAA	-16	NA	83807977	83819737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_83808122_83808679_83808747_83809304_83809426_83811420
transcript_3741.known	chr1	+	775	3	FSM	ENSG00000117448.14	ENST00000496999.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	667.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGCAGTCTCACATG	45538077	True	NA	NA	False	NA	NA	NA	45550845	45567213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45566568_45566689_45566868
transcript_37413.known	chr16	+	1922	6	FSM	ENSG00000140961.14	ENST00000393306.6	1922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCGTCTGAGGACTC	83953223	True	NA	NA	False	AATAAA	-17	NA	83953239	83966332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_83953371_83957639_83957739_83959259_83959397_83960568_83960761_83960980_83961073_83965061
transcript_37414.known	chr16	-	4377	23	FSM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	23.4344963640081	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTAACGGACTCT	-84112641	True	NA	-21	True	AATAAA	-27	NA	84116942	84053762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_37415.known	chr16	+	521	1	FSM	ENSG00000260018.1	ENST00000565382.1	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGGGTGACTTAGAT	84116788	True	NA	30	True	AATAAA	-36	NA	84117050	84117571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84117000_84117600
transcript_37421.known	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	101.250514401985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-84142133	True	NA	-45	True	NA	NA	NA	84145169	84124122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
transcript_37424.known	chr16	-	3648	6	FSM	ENSG00000103160.12	ENST00000219439.9	3648	6	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	29.9372677444018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAACTATGTGCCT	-84142141	True	NA	-12	True	ATTAAA	-23	NA	84145177	84122140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84124729_84129547_84129776_84129985_84130432_84131101_84131328_84135543_84135606_84145079
transcript_37433.known	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	-84142156	True	NA	-1	True	AATAAA	-30	NA	84145192	84130960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84131328_84135543_84135606_84145079
transcript_37436.known	chr16	-	5013	8	FSM	ENSG00000140950.16	ENST00000343629.11	5013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.2647285290672	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAACTATATTTTG	-84503056	True	NA	NA	False	ATTAAA	-20	NA	84504659	84476354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_37441.known	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	79.4243175747971	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-84599488	True	NA	-2	True	AATAAA	-24	NA	84618078	84565595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
transcript_37442.nnic	chr16	-	1636	4	NNC	ENSG00000103187.8	novel	1842	4	NA	NA	-636	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	396.713442620181	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-84618672	True	NA	-2	True	AATAAA	-24	NA	84618714	84565595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_84566956_84590104_84590263_84617500_84617584_84618679
transcript_37444.nic	chr16	+	3395	15	NIC	ENSG00000103194.16	novel	3328	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	476.468535483847	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678743	True	NA	17	True	AATAAA	-21	NA	84699985	84779922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37445.known	chr16	+	2717	15	FSM	ENSG00000103194.16	ENST00000570191.5	2717	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	484.729342741169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGGGCTAGAATGAAA	84678761	True	NA	NA	False	NA	NA	NA	84700003	84779194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84704739_84704861_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37446.known	chr16	+	3328	14	FSM	ENSG00000103194.16	ENST00000219473.12	3328	14	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_4	129.575958395386	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678757	True	NA	17	True	AATAAA	-21	NA	84699999	84779922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37451.nic	chr16	+	3303	13	NIC	ENSG00000103194.16	novel	3328	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_2	389.503922387895	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678721	True	NA	17	True	AATAAA	-21	NA	84699963	84779922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_84700112_84733434_84733504_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37454.known	chr16	+	1315	12	FSM	ENSG00000103194.16	ENST00000563048.5	1315	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	418.126359958999	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGAAACCAACTGCTG	84678761	True	NA	NA	False	NA	NA	NA	84700003	84779015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733434_84733504_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37457.known	chr16	+	3070	11	FSM	ENSG00000103194.16	ENST00000540269.6	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	565.737651212998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678752	True	NA	17	True	AATAAA	-21	NA	84699994	84779922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733434_84733504_84744632_84745674_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37464.nnic	chr16	+	1813	7	NIC	ENSG00000103194.16	novel	3070	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	553.908360852427	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678739	True	NA	17	True	AATAAA	-21	NA	84699981	84779922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_84700112_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_37468.known	chr16	+	888	5	FSM	ENSG00000103194.16	ENST00000562743.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	665.262730054826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCGGGGCTGATTTT	84678743	True	NA	NA	False	NA	NA	NA	84699985	84745211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632
transcript_37470.nic	chr16	+	1676	4	ISM	ENSG00000103194.16	ENST00000219473.12	3328	14	-36	33892	-22	819	5prime_fragment	FALSE	canonical	3	1371	junction_3	92.7086235950512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTGTGCTCCTTTTT	84678721	True	NA	-45	True	NA	NA	NA	84699963	84746030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632
transcript_37471.nic	chr16	+	1735	4	ISM	ENSG00000103194.16	ENST00000219473.12	3328	14	-36	33833	-22	878	5prime_fragment	FALSE	canonical	3	1371	junction_3	92.7086235950512	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTTTTTTTTTTGGA	84678721	True	NA	14	True	AAGAAA	-17	NA	84699963	84746089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632
transcript_37472.known	chr16	-	601	3	FSM	ENSG00000270124.1	ENST00000602862.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCTACTGTCT	-85583541	True	NA	NA	False	NA	NA	NA	85583571	85580008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_85580230_85582018_85582170_85583342
transcript_37475.known	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_4	34.4310906013736	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	-85677421	True	NA	0	True	CATAAA	-23	NA	85688954	85676197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
transcript_37481.known	chr16	+	716	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2795.26877061938	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85727306	True	NA	30	True	AATAAA	-19	NA	85799696	85807002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
transcript_37483.known	chr16	+	873	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	2722.21164680485	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	85727302	True	NA	-21	True	AATGAA	-6	NA	85799692	85807044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_37484.known	chr16	-	1966	5	FSM	ENSG00000131148.9	ENST00000253457.8	1966	5	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_3	15.0582203463756	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTTCCCCTTTCTTC	-85791658	True	NA	0	True	AATAAA	-24	NA	85799544	85778623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_85779868_85780378_85780474_85781210_85781281_85788973_85789051_85799064
transcript_37489.known	chr16	+	3946	1	FSM	ENSG00000131143.10	ENST00000569997.1	3946	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85802942	False	NA	30	True	AATAAA	-19	NA	85803056	85807002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85803100_85807000
transcript_37490.known	chr16	+	490	5	FSM	ENSG00000131143.10	ENST00000566405.5	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	2623.9798374797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGAACCCCAT	85727307	True	NA	NA	False	NA	NA	NA	85799697	85806802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85799753_85801204_85801279_85804940_85805105_85805732_85805865_85806737
transcript_37491.known	chr16	+	1481	3	FSM	ENSG00000131143.10	ENST00000564903.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	6140	junction_2	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCACTGCTAATAAATGAC	85801087	True	NA	-4	True	NA	NA	NA	85801201	85806968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85801279_85804936_85805105_85805732
transcript_37492.known	chr16	+	1235	3	FSM	ENSG00000131143.10	ENST00000564648.1	1235	3	0	0	0	0	multi-exon	FALSE	canonical	3	6201	junction_1	398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCACTGCTAATAAATGA	85801087	True	NA	-5	True	NA	NA	NA	85801201	85806967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85801279_85804936_85805865_85806737
transcript_37493.nnic	chr16	+	665	2	Antisense	novelGene_ENSG00000268754.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGGCTCTTC	86278234	True	NA	10	True	AATAAA	-22	NA	86278427	86281241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_86278682_86280830
transcript_37495.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000634347.1	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.1136400116731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554749_86555168
transcript_37496.known	chr16	-	3028	8	FSM	ENSG00000103248.19	ENST00000360900.11	3028	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	8.92371296385224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCACACCTTTCAC	-86554562	True	NA	-9	True	AATAAA	-15	NA	86555235	86530185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554752_86555168
transcript_37497.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.9447963778537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
transcript_37500.known	chr16	-	845	6	FSM	ENSG00000103248.19	ENST00000568037.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.61034021896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGACCATGTCTTATG	-86554505	True	NA	-9	True	AATAAA	-15	NA	86555178	86547145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86547569_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_37501.known	chr16	+	1980	1	FSM	ENSG00000280278.1	ENST00000624773.1	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAACCTTAACTCAAAT	86555303	True	NA	NA	False	AATAAA	-21	NA	86555319	86557299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_86555300_86557300
transcript_37503.known	chr16	-	1113	7	FSM	ENSG00000260456.7	ENST00000567970.2	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.6866805086908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-87316731	True	NA	-1	True	AATAAA	-22	NA	87317392	87302813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87303076_87305718_87305906_87310296_87310334_87311149_87311297_87314970_87315097_87315771_87315824_87317090
transcript_37506.known	chr16	-	974	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	17.8675683852056	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGACCTCTGATTTC	-87316759	True	NA	12	True	AATAAA	-35	NA	87317420	87302800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
transcript_37507.known	chr16	-	953	5	FSM	ENSG00000260456.7	ENST00000253461.8	953	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	26.8979553126255	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-87316755	True	NA	-1	True	AATAAA	-22	NA	87317416	87302813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317090
transcript_37508.known	chr16	+	2147	4	FSM	ENSG00000140941.14	ENST00000268607.10	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_3	7.58653778449403	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCCAGTTTAATGGG	87387102	True	NA	14	True	AATAAA	-21	NA	87392335	87404774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87392468_87398814_87398871_87402174_87402282_87402922
transcript_37509.known	chr16	+	401	2	FSM	ENSG00000270006.3	ENST00000602282.3	417	2	16	0	9	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGTTCTTTAAGTTA	87317337	True	NA	9	True	AGTAAA	-22	NA	87317508	87318043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87317723_87317856
transcript_37510.nnic	chr16	-	1983	12	NNC	ENSG00000104731.14	novel	4572	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	44.8777954998418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCTAATCTTTAGTTT	-87761777	True	NA	-5	True	AATAAA	-18	NA	87765992	87698145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_87698463_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_37513.known	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	23.5887632585118	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761771	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_37514.nnic	chr16	-	1945	12	NNC	ENSG00000104731.14	novel	1924	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	49.2844669006975	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761777	True	NA	NA	False	AATAAA	-18	NA	87765992	87707811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730660_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_37516.known	chr16	-	1757	11	FSM	ENSG00000104731.14	ENST00000562155.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	53.8506267372999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAATTGGACTTG	-87761714	True	NA	NA	False	NA	NA	NA	87765929	87707839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87761948_87762041_87765791
transcript_37518.known	chr16	-	1821	11	FSM	ENSG00000104731.14	ENST00000347925.9	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	43.952246814014	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761761	True	NA	NA	False	AATAAA	-18	NA	87765976	87707811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_37524.known	chr16	-	1665	1	FSM	ENSG00000269935.1	ENST00000602388.1	1665	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTACTTTTCATTTCT	-87602145	True	NA	NA	False	AATAAA	-17	NA	87602190	87600525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87600500_87602200
transcript_37526.nic	chr16	+	2334	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.0374366775363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949499	True	NA	15	True	AATAAA	-16	NA	87951431	88077316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_37527.nic	chr16	+	2325	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	21.2464049246507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949499	True	NA	15	True	AATAAA	-16	NA	87951431	88077316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_37528.known	chr16	+	2283	13	FSM	ENSG00000172530.21	ENST00000393208.6	2283	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	40.2468080169789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	87949501	True	NA	17	True	AATAAA	-18	NA	87951433	88077318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_37530.known	chr16	+	1551	12	FSM	ENSG00000172530.21	ENST00000479780.6	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	25.5057925684628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGCCCATGGCACCAGG	87949501	True	NA	NA	False	NA	NA	NA	87951433	88076661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_37531.nic	chr16	+	652	2	ISM	ENSG00000172530.21	ENST00000412691.5	586	5	-13	31503	0	0	5prime_fragment	FALSE	canonical	1	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCTGTCATCATT	87949499	True	NA	12	True	ATTAAA	-21	NA	87951431	87952748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_87951516_87952180
transcript_37532.known	chr16	+	2164	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.6757063737909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	87949554	True	NA	17	True	AATAAA	-18	NA	87951486	88077318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_37536.known	chr16	+	3705	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_7	34.2680255902594	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	88564942	True	NA	15	True	AATAAA	-16	NA	88570402	88631964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_37537.known	chr16	+	1028	2	FSM	ENSG00000124391.5	ENST00000569133.1	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCCTATTTATGTGTAT	88638526	True	NA	NA	False	NA	NA	NA	88638590	88640122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88639310_88639813
transcript_37538.known	chr16	+	1060	3	FSM	ENSG00000124391.5	ENST00000244241.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAGGCCAACATTCA	88638507	True	NA	13	True	ATTAAA	-13	NA	88638571	88640468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88638648_88638980_88639310_88639813
transcript_37539.known	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_1	101.39625239623	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-88638469	True	NA	-7	True	AATAAA	-17	NA	88651053	88643288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_37541.known	chr16	-	1052	4	FSM	ENSG00000051523.11	ENST00000563526.5	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	2459	junction_1	97.0188985026457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGACGCAGCGGTTGCTG	-88650959	False	NA	NA	False	NA	NA	NA	88650988	88645964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88646839_88647100_88647176_88648044_88648115_88650955
transcript_37546.nic	chr16	-	1984	11	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	255.979764825269	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	-88655149	False	NA	-9	True	AATAAA	-15	NA	88663174	88651939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_37551.known	chr16	-	1799	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	0	0	0	multi-exon	TRUE	canonical	3	565	junction_4	59.4090237149663	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	-88655066	True	NA	-9	True	AATAAA	-15	NA	88663091	88651939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_37559.known	chr16	-	217	2	FSM	ENSG00000167508.12	ENST00000562741.1	217	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGGTTTTTGTGTGA	-88655136	True	NA	-8	True	AATAAA	-17	NA	88663161	88662101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88662168_88663010
transcript_37560.known	chr16	+	2446	4	FSM	ENSG00000260630.8	ENST00000669434.1	2446	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCAGCTGTCCCCCAT	88662862	True	NA	6	True	AGTAAA	-11	NA	88663334	88675484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603
transcript_37562.known	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-88685534	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88678630_88681093_88681715_88686330
transcript_37568.known	chr16	+	1721	15	FSM	ENSG00000174177.13	ENST00000453996.7	1721	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	24.2953762292838	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGGGACGGCAGCGC	88703487	True	NA	16	True	AATAAA	-34	NA	88706502	88715396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_3757.known	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_5	518.28739269692	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	45547889	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_37570.known	chr16	+	1672	14	FSM	ENSG00000174177.13	ENST00000312060.9	1672	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	60.5553197131526	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	88703467	True	NA	6	True	AATAAA	-24	NA	88706482	88715386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715181
transcript_37572.known	chr16	+	1586	14	FSM	ENSG00000174177.13	ENST00000564105.5	1586	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	59.3995596979278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGGGACTGGCCTCT	88703467	True	NA	-60	True	NA	NA	NA	88706482	88715320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_37582.known	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2321.37473637211	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783155	True	NA	-4	True	AGTAAA	-15	NA	88811928	88809468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
transcript_37583.known	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2364.25611979751	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783152	True	NA	-4	True	AGTAAA	-15	NA	88811925	88809468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_37584.known	chr16	-	542	4	FSM	ENSG00000198931.11	ENST00000568319.5	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2195.91863844421	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783164	True	NA	-4	True	AGTAAA	-15	NA	88811937	88809468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809707_88810069_88810149_88811549_88811657_88811819
transcript_37585.known	chr16	+	1060	6	FSM	ENSG00000167515.10	ENST00000564365.5	1060	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	401.818566022029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCCTCCTCTTTCTGGA	88856143	True	NA	NA	False	NA	NA	NA	88856219	88861415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88856247_88858618_88858790_88859344_88859444_88859572_88859751_88859892_88859973_88860910
transcript_37591.known	chr16	+	854	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	429.079465250902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	88846094	True	NA	NA	False	NA	NA	NA	88857085	88861351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
transcript_37593.known	chr16	-	2344	14	FSM	ENSG00000141012.13	ENST00000268695.10	2344	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	13.706561293235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTGGCTGAGTGA	-88854945	True	NA	-19	True	AATAAA	-34	NA	88856947	88813733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88842705_88842830_88856757
transcript_37594.known	chr16	+	2215	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	305.427057576764	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	88846094	True	NA	28	True	AATAAA	-29	NA	88857085	88862686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
transcript_37595.known	chr16	-	703	3	FSM	ENSG00000141012.13	ENST00000568311.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTACTTCTGCTTTT	-88854968	True	NA	-8	True	AATAAA	-19	NA	88856970	88855127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88855523_88856206_88856302_88856757
transcript_37596.known	chr16	+	915	5	FSM	ENSG00000167515.10	ENST00000564404.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	481.254805170816	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGGCTTTTTCCTTC	88846152	True	NA	14	True	ACTAAA	-14	NA	88857143	88861110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860892
transcript_37597.known	chr16	+	499	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	397.02141000203	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	88846143	True	NA	16	True	ACTAAA	-16	NA	88857134	88861112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
transcript_37598.known	chr16	+	4095	11	FSM	ENSG00000176715.17	ENST00000614302.5	4095	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.2575482748176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTCTGGTGCTGAC	89092427	True	NA	NA	False	ATTAAA	-18	NA	89093851	89156233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_37600.known	chr16	+	2247	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.5816434315147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	89092458	True	NA	9	True	AAAACA	-24	NA	89093882	89154589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_37609.known	chr16	+	2866	14	FSM	ENSG00000129910.8	ENST00000289746.3	2866	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.72160242458822	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGGCGCCCACTGCCAC	89171724	True	NA	NA	False	AATGAA	-25	NA	89171747	89195492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89171874_89179415_89179575_89180199_89180356_89183547_89183693_89185172_89185334_89187428_89187558_89188099_89188286_89190242_89190497_89191329_89191473_89191654_89191895_89192204_89192445_89193469_89193607_89193754_89193914_89194861
transcript_37610.known	chr16	-	2443	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTATAGGAGTTC	-89217456	True	NA	-6	True	ATTAAA	-16	NA	89217653	89215210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89215200_89217700
transcript_37620.known	chr16	+	2187	6	FSM	ENSG00000167526.14	ENST00000311528.10	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	3823.70488400975	5091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	89328906	True	NA	30	True	AATACA	-20	NA	89560681	89564542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_37627.known	chr16	+	712	6	FSM	ENSG00000167526.14	ENST00000567815.5	712	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7586.28972818729	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCCACGTGGTGTGT	89328905	True	NA	16	True	AATAAA	-38	NA	89560680	89563080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89560713_89560953_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_3763.known	chr1	+	1538	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	621.329572666409	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	45547913	True	NA	14	True	AATAAA	-14	NA	45584064	45618247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_37631.known	chr16	+	924	5	FSM	ENSG00000167526.14	ENST00000484610.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	3985.08302924795	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCAGTCATGCTGGGTCT	89328903	True	NA	3	True	AATAAA	-25	NA	89560678	89563067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89560713_89560939_89561064_89561226_89561752_89562334_89562392_89562883
transcript_37635.nnic	chr16	+	1726	12	NNC	ENSG00000015413.10	novel	1631	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	40.1414853110246	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	89612048	True	NA	12	True	AATAAA	-15	NA	89613641	89638430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_89613720_89628871_89628970_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_37637.nic	chr16	+	1716	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-88	3	5	0	multi-exon	FALSE	canonical	3	82	junction_6	13.9143810498347	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	89611960	True	NA	12	True	AATAAA	-15	NA	89613553	89638430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_37640.nic	chr16	+	1409	10	NIC	ENSG00000015413.10	novel	1631	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	34.0014524018033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	89612057	True	NA	12	True	AATAAA	-15	NA	89613650	89638430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89613720_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_37642.known	chr16	+	1772	9	FSM	ENSG00000015413.10	ENST00000564281.5	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	14.6538177619349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGGCCCGCAATAAAAG	89612079	True	NA	-20	True	NA	NA	NA	89613672	89638398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637972_89638051
transcript_37645.known	chr16	-	2342	7	FSM	ENSG00000131165.16	ENST00000397901.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_4	20.169421299471	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89650031	True	NA	-7	True	AATAAA	-19	NA	89657708	89644434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_37648.known	chr16	-	1845	6	FSM	ENSG00000131165.16	ENST00000675778.1	1845	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	177.182391901679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCGTGGGTGTTAC	-89650016	True	NA	NA	False	NA	NA	NA	89657693	89644769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89651568_89651647_89653903_89653924_89657581
transcript_37649.known	chr16	-	2550	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	156.236999459155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAGTACATGGTCTC	NA	False	NA	NA	False	TTTAAA	-13	NA	89657738	89644236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
transcript_37650.known	chr16	-	2797	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	22.068982758614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89649998	True	NA	-7	True	AATAAA	-19	NA	89657675	89644434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_37651.nic	chr16	+	1184	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	30	0	intron_retention	FALSE	canonical	2	9	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	NA	False	NA	-1	True	NA	NA	NA	89657769	89661483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89657836_89658247_89658422_89660539
transcript_37652.known	chr16	+	2190	3	FSM	ENSG00000167523.15	ENST00000301031.8	2190	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	24.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAAGC	89656682	True	NA	NA	False	NA	NA	NA	89657801	89671267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89657836_89658247_89658422_89669285
transcript_37656.known	chr16	+	647	3	FSM	ENSG00000167523.15	ENST00000566204.2	647	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGCAGCCCCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	89657739	89669631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89657867_89658247_89658422_89669285
transcript_37658.nic	chr16	+	1250	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	-12	0	intron_retention	FALSE	canonical	2	9	junction_2	17.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	89656697	True	NA	-1	True	NA	NA	NA	89657816	89661483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89657949_89658247_89658422_89660539
transcript_37659.known	chr16	+	1297	3	FSM	ENSG00000167523.15	ENST00000457689.3	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	17.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCCACCCTGTGAG	89656718	True	NA	NA	False	NA	NA	NA	89657837	89670297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89657949_89658247_89658422_89669285
transcript_37661.known	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	89656709	True	NA	NA	False	NA	NA	NA	89657828	89671272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89658210_89669285
transcript_37663.known	chr16	+	1546	2	FSM	ENSG00000167523.15	ENST00000611218.1	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGCTCTGCAGAG	89657701	True	NA	8	True	AATAAA	-19	NA	89658046	89670456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89658422_89669285
transcript_37677.known	chr16	+	1767	13	FSM	ENSG00000185324.22	ENST00000353379.12	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	83.2214248589602	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681626	True	NA	35	True	GATAAA	-16	NA	89686688	89696354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_37687.nic	chr16	+	1749	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_1	85.3409420435988	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681605	True	NA	34	True	GATAAA	-15	NA	89686667	89696353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_37688.known	chr16	+	1424	13	FSM	ENSG00000185324.22	ENST00000505473.5	1424	13	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	127.143919983965	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGGACAAGAGGGACA	89681607	True	NA	NA	False	NA	NA	NA	89686669	89696164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_37699.known	chr16	+	1376	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	119.924287409781	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	89681628	True	NA	NA	False	NA	NA	NA	89686690	89696038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_377.known	chr1	+	1257	8	FSM	ENSG00000169972.12	ENST00000379031.10	1257	8	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	29.9829883740219	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	1304240	True	NA	17	True	AATAAA	-17	NA	1308596	1311677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1308721_1308914_1308973_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_37708.nic	chr16	+	1859	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	193	junction_1	78.6029881878934	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681604	True	NA	34	True	GATAAA	-15	NA	89686666	89696353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_37709.known	chr16	+	1703	12	FSM	ENSG00000185324.22	ENST00000505733.5	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	128.964662979906	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681627	True	NA	35	True	GATAAA	-16	NA	89686689	89696354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_37715.nic	chr16	+	1820	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	182	junction_1	81.1758625525902	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681605	True	NA	34	True	GATAAA	-15	NA	89686667	89696353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_3772.known	chr1	+	3097	13	FSM	ENSG00000132780.17	ENST00000537798.5	3097	13	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	698.984913801594	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTTTAAAGATCTTA	45583936	True	NA	29	True	AATAAA	-25	NA	45583987	45618904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_37725.known	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	82.4024271487194	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681637	True	NA	35	True	GATAAA	-16	NA	89686699	89696354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_37737.nic	chr16	-	1774	14	ISM	ENSG00000187741.15	ENST00000568369.5	4601	43	-25	52641	-14	0	5prime_fragment	FALSE	canonical	3	66	junction_4	40.9856375478911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-89811742	True	NA	NA	False	NA	NA	NA	89816671	89791043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_37740.nic	chr16	-	2174	13	NIC	ENSG00000187741.15	novel	5452	43	NA	NA	-14	10	intron_retention	FALSE	canonical	3	66	junction_3	41.1976098281873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACACACACACA	-89811742	True	NA	NA	False	NA	NA	NA	89816671	89791033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_37745.nic	chr16	-	2061	12	NIC	ENSG00000187741.15	novel	5452	43	NA	NA	-14	10	intron_retention	FALSE	canonical	3	15	junction_2	49.504987644205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACACACACACA	-89811742	True	NA	NA	False	NA	NA	NA	89816671	89791033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_89792069_89792470_89792548_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_37748.known	chr16	-	1088	11	FSM	ENSG00000187741.15	ENST00000534992.5	1088	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	52.8359725944361	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCTGCACCAATGTT	-89811726	True	NA	NA	False	NA	NA	NA	89816655	89798918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89799080_89799171_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_37750.known	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	23.5801758127039	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	-89811706	True	NA	-29	True	ATTAAA	-32	NA	89816635	89798384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_37752.known	chr16	-	650	5	FSM	ENSG00000187741.15	ENST00000567883.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	12.5099960031968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTTTAGAAATCATCTGT	-89811679	True	NA	NA	False	NA	NA	NA	89816608	89810571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_37755.nic	chr16	+	1491	4	NIC	ENSG00000261373.1	novel	1753	4	NA	NA	-6	0	intron_retention	FALSE	canonical	2	14	junction_3	26.7124606795322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTCCTCTCCTTGCCAGT	89709517	True	NA	NA	False	NA	NA	NA	89711849	89718164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89712223_89712688_89712819_89716470_89716638_89717343
transcript_37756.known	chr16	+	1753	4	FSM	ENSG00000261373.1	ENST00000562866.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2966464777861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTCTCCTTGCCAGTT	89709523	True	NA	NA	False	NA	NA	NA	89711855	89718165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89712223_89712688_89712819_89716470_89716905_89717343
transcript_37759.known	chr16	+	2377	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_17	93.9633498291281	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	89863936	True	NA	35	True	TATAAA	-19	NA	89873585	89911384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
transcript_37765.known	chr16	+	2248	18	FSM	ENSG00000141002.20	ENST00000263346.13	2248	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	36.6927766950349	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	89863942	True	NA	30	True	TATAAA	-14	NA	89873591	89911379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_37767.nic	chr16	+	2247	18	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_7	72.0804049314826	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	NA	False	NA	30	True	TATAAA	-14	NA	89873547	89911379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895082_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_3778.known	chr1	+	604	5	FSM	ENSG00000132780.17	ENST00000464190.6	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_3	48.1404196076436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCTAAGATGCTT	45547889	True	NA	104	True	GGGGCT	-15	NA	45584040	45606680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481
transcript_37781.known	chr16	+	925	5	FSM	ENSG00000258947.8	ENST00000556536.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	238.85979150958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGACATCTGCTTCCGC	89911148	True	NA	NA	False	NA	NA	NA	89923341	89935070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934329_89934576_89934728
transcript_37784.known	chr16	+	1706	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	25.3026129524645	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGCCAGAGATGTCC	89911148	True	NA	34	True	AATAAA	-23	NA	89923341	89936097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
transcript_37785.nic	chr16	+	506	3	ISM	ENSG00000141002.20	ENST00000614813.4	2047	6	-93	6020	-22	0	5prime_fragment	FALSE	canonical	3	341	junction_1	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAACAAGA	NA	False	NA	28	True	NA	NA	NA	89873547	89884613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89873860_89883350_89883513_89884581
transcript_37786.known	chr16	+	1767	13	FSM	ENSG00000140995.17	ENST00000563795.1	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	168.203910642873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGAAATTCCACAGCTC	89942072	True	NA	NA	False	NA	NA	NA	89948802	89966306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964220_89964311_89964465_89964576_89965860
transcript_37787.known	chr16	+	3620	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	164.586350183321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942024	True	NA	5	True	ATTAAA	-14	NA	89948754	89968060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_37794.known	chr16	+	612	6	FSM	ENSG00000140995.17	ENST00000561784.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	208.373318829451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGCACCGCTTTTACA	89942024	True	NA	NA	False	NA	NA	NA	89948754	89959048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957472_89957661_89959013
transcript_37795.known	chr16	+	852	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	189.022749953544	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942064	True	NA	NA	False	ATTAAA	-14	NA	89948794	89959366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_37798.nic	chr16	+	889	6	NIC	ENSG00000140995.17	novel	852	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	195.206557266911	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942024	True	NA	NA	False	ATTAAA	-14	NA	89948754	89959366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89948815_89949419_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_37799.known	chr16	+	580	6	FSM	ENSG00000140995.17	ENST00000561741.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	247.618577655232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACAAGTGTAACACCAT	89942044	True	NA	NA	False	NA	NA	NA	89948774	89959097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949564_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_37800.known	chr16	+	816	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	122.693469671372	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	89942000	True	NA	NA	False	ATTAAA	-11	NA	89948730	89959363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_37803.nic	chr16	+	682	4	ISM	ENSG00000140995.17	ENST00000562986.5	468	5	-45	1606	3	0	5prime_fragment	FALSE	canonical	2	13	junction_1	235.006855691961	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942003	True	NA	NA	False	ATTAAA	-14	NA	89948733	89959366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89948815_89955168_89955267_89957510_89957661_89959013
transcript_37806.known	chr16	+	535	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	89958208	True	NA	NA	False	ATTAAA	-13	NA	89958350	89959365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89958534_89959013
transcript_37807.known	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	-89972166	True	NA	-17	True	ATTAAA	-17	NA	89972534	89969790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89969800_89972500
transcript_37809.nic	chr16	+	1319	6	ISM	ENSG00000223959.9	ENST00000557444.5	2447	17	-50	15483	0	484	5prime_fragment	FALSE	canonical	3	27	junction_1	12.3223374405995	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAGAGACAAAG	89970667	True	NA	NA	False	NA	NA	NA	89972580	89985185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_3781.known	chr1	-	3641	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_12	149.150068908987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45678241	True	NA	-17	True	AATAAA	-27	NA	45686533	45627303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
transcript_37816.known	chr16	+	1687	11	FSM	ENSG00000141013.17	ENST00000536122.7	1687	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.5746733949854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCATCCTCTTTCCTGG	90018479	True	NA	18	True	AATGAA	-16	NA	90019642	90043472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_90019769_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_37819.known	chr16	+	3094	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	34.3920048848566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	90022398	True	NA	16	True	TATAAA	-16	NA	90022679	90044960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_37821.nic	chr16	-	1714	5	NIC	ENSG00000222019.7	novel	1349	5	NA	NA	-27	395	combination_of_known_junctions	TRUE	canonical	2	4	junction_4	2.58602010819715	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAACTGCCTTGGTCTC	-90047665	True	NA	NA	False	AATAAA	-29	NA	90047800	90039365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_90040418_90043647_90043990_90044501_90044624_90046956_90047097_90047742
transcript_37822.known	chr16	-	2056	4	FSM	ENSG00000003249.15	ENST00000002501.11	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	36.9864840178139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-90014581	True	NA	-7	True	ATTAAA	-20	NA	90019456	90004870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019310
transcript_37823.known	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	332.129827360058	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-90019099	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
transcript_37824.known	chr16	+	1906	4	FSM	ENSG00000260528.6	ENST00000663989.1	1906	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.9740516301441	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGGTCTGTGCTT	90100081	True	NA	NA	False	AATAAA	-13	NA	90106528	90120883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90119464
transcript_37825.nic	chr17	-	2554	10	NIC	ENSG00000181031.16	novel	2719	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	3.19722101554181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	-386081	True	NA	-11	True	ATTAAA	-17	NA	386240	212501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_333758_333935_386196
transcript_37826.known	chr17	-	880	2	FSM	ENSG00000181031.16	ENST00000572965.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCCAGGACCGTGGG	NA	False	NA	NA	False	NA	NA	NA	215933	213323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_213924_215653
transcript_37828.known	chr17	-	2882	5	FSM	ENSG00000141252.21	ENST00000680241.1	2882	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.7891197504849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACGTATGCAAGCATTT	-709900	True	NA	NA	False	AATAAA	-27	NA	714828	667409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_669888_697417_697485_699330_699381_710532_710614_714622
transcript_37829.nic	chr17	-	1056	4	ISM	ENSG00000141252.21	ENST00000681295.1	1264	5	-19	22761	-1	622	5prime_fragment	FALSE	canonical	3	45	junction_2	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTTATAAGTCTTAT	-709930	True	NA	NA	False	NA	NA	NA	714858	696795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_697485_699330_699381_710532_710614_714622
transcript_37830.known	chr17	-	1369	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTGATTGTCTTT	-709886	True	NA	-1	True	AATAAA	-14	NA	714814	704999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_706096_710532_710614_714622
transcript_37831.known	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9203969395706	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	731398	True	NA	94	True	ATTAAA	-19	NA	732595	742968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
transcript_37833.known	chr17	+	2386	4	FSM	ENSG00000167695.15	ENST00000570699.1	2386	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.5034434281774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTGTCTTTTTT	732619	True	NA	9	True	TTTAAA	-13	NA	732676	742883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_733182_737845_738048_740504_740601_741300
transcript_37834.known	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	-746924	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_748033_752132
transcript_37836.known	chr17	-	1809	10	FSM	ENSG00000167699.14	ENST00000301328.9	1809	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	327.074952711696	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGAAATCAAGCTGTG	-771322	True	NA	-20	True	AATAAA	-17	NA	782279	759329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778621_778662_780683_780739_782165
transcript_37844.known	chr17	-	2059	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-233	-47	226	multi-exon	FALSE	canonical	3	689	junction_6	29.7885779284611	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATGCTATTATACCTT	-771384	True	NA	NA	False	NA	NA	NA	782341	759096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
transcript_3785.known	chr1	-	3599	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_11	141.076381632595	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45678244	True	NA	-17	True	AATAAA	-27	NA	45686536	45627303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
transcript_37861.known	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	38.8615777114391	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	777298	True	NA	14	True	AATAAA	-23	NA	782352	792509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_783082_783328_787964_788133_791533
transcript_37863.known	chr17	+	727	3	FSM	ENSG00000171861.11	ENST00000574509.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGATGTAGAAAC	777312	True	NA	NA	False	NA	NA	NA	782366	791766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_787964_788133_791533
transcript_37864.known	chr17	+	770	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGTGGGGTTTCACCA	777303	True	NA	NA	False	NA	NA	NA	782357	783517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_783082
transcript_37865.known	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_3	41.811747418904	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	997128	1003671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
transcript_37870.known	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	5581.5333441826	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	NA	False	NA	-20	True	AATAAA	-25	NA	1400220	1344539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
transcript_37873.known	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	11131	junction_2	760.132883119787	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	NA	False	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
transcript_3788.nic	chr1	-	3395	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	31	-189	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	175.945803075364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-45684658	True	NA	-41	True	AATAAA	-15	NA	45687102	45627492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_37883.known	chr17	-	691	3	FSM	ENSG00000108953.17	ENST00000486241.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	11792	junction_2	805.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCAAACGGCATACATTT	NA	False	NA	-91	True	NA	NA	NA	1400209	1361680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1362009_1364858_1365059_1400046
transcript_37884.known	chr17	-	780	2	FSM	ENSG00000108953.17	ENST00000573026.1	780	2	0	0	0	0	multi-exon	FALSE	canonical	2	121	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	-1361581	True	NA	2	True	NA	NA	NA	1400181	1344854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1345500_1400046
transcript_37885.known	chr17	-	465	2	FSM	ENSG00000108953.17	ENST00000489287.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	11792	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTTATAATGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	1400200	1364747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1365059_1400046
transcript_37886.known	chr17	-	3675	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	34.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	-1452447	True	NA	0	True	AAAAAG	-4	NA	1456223	1420688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1423651_1436789_1437156_1455876
transcript_37887.known	chr17	-	2706	12	FSM	ENSG00000132376.20	ENST00000421807.7	2706	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	21.5299138428988	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	-1515241	True	NA	-6	True	NA	NA	NA	1516612	1494576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1516455
transcript_37890.known	chr17	-	3888	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	185.361206457835	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACCAAACAAGCAAAACAT	-1558604	True	NA	NA	False	NA	NA	NA	1562792	1517717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_37892.known	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	158	junction_1	0	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	1512446	True	NA	9	True	AATAAA	-18	NA	1516930	1518096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_1517094_1517717
transcript_37895.known	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_29	202.864229699595	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-1663506	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_37896.known	chr17	-	1383	4	FSM	ENSG00000186594.15	ENST00000334146.8	1488	4	59	46	0	9	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGGAGAGGTGGG	-1716102	True	NA	NA	False	AATATA	-25	NA	1716210	1711492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1712400_1713702_1714015_1714370_1714454_1716129
transcript_37897.known	chr17	-	555	4	FSM	ENSG00000186594.15	ENST00000608198.6	1911	4	38	1318	-1	-464	multi-exon	FALSE	canonical	1	2	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGATGTGGAGAAGA	-1716101	True	NA	NA	False	NA	NA	NA	1716209	1712824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1712905_1713702_1714015_1714370_1714454_1716129
transcript_37898.known	chr17	-	525	3	FSM	ENSG00000186594.15	ENST00000690262.1	1326	3	36	765	0	92	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGGAAATTCATAAAAG	-1716103	True	NA	NA	False	NA	NA	NA	1716211	1712268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1712400_1713702_1714015_1716129
transcript_37899.known	chr17	-	584	3	FSM	ENSG00000186594.15	ENST00000609442.6	1855	3	59	1212	0	-353	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAACAAAGGTGACTCTG	-1716102	True	NA	NA	False	NA	NA	NA	1716210	1712713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1712905_1713702_1714015_1716129
transcript_379.nic	chr1	+	1235	7	NIC	ENSG00000169972.12	novel	1257	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	129.270710784256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	1304204	True	NA	17	True	AATAAA	-17	NA	1308560	1311677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_1308721_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_37904.nic	chr17	+	1704	8	NIC	ENSG00000132386.11	novel	1438	8	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	65.3973724742104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1759536	True	NA	16	True	AATAAA	-17	NA	1761988	1777565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_1762114_1766902_1766995_1769851_1770051_1770833_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_37905.known	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	17.4636649027841	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1759607	True	NA	16	True	AATAAA	-17	NA	1762059	1777565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_37908.nic	chr17	+	1463	8	NIC	ENSG00000132386.11	novel	459	4	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	63.0225097460731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1762734	True	NA	16	True	AATAAA	-17	NA	1762804	1777565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_1762884_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_37915.known	chr17	+	4847	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_8	68.6626718093609	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTAAATGTTTAAGAAA	1822259	True	NA	NA	False	NA	NA	NA	1830004	1900082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
transcript_3792.known	chr1	-	3117	9	FSM	ENSG00000197429.11	ENST00000396478.4	3117	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTCCTTTTTTGCTA	-45750180	True	NA	NA	False	AAAAAG	-7	NA	45750653	45698710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_37928.nic	chr17	+	1386	9	ISM	ENSG00000108963.19	ENST00000263083.12	2646	13	-6	2937	-6	480	5prime_fragment	FALSE	canonical	3	162	junction_5	23.1678656764062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGGTCACTGTCTTTA	2027981	True	NA	NA	False	AATACA	-13	NA	2030146	2040961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504
transcript_37929.known	chr17	+	991	6	FSM	ENSG00000108963.19	ENST00000576129.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	25.1029878699728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCGGACAGCTAACAAGCA	2028020	True	NA	NA	False	NA	NA	NA	2030185	2037283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834
transcript_37930.known	chr17	+	1031	2	FSM	ENSG00000262664.3	ENST00000572195.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	2039431	True	NA	18	True	AATAAA	-14	NA	2042021	2043425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2042232_2042604
transcript_37933.known	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	62.143226599887	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-2321779	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_3794.nic	chr1	-	1315	5	ISM	ENSG00000197429.11	ENST00000396478.4	3117	9	-131	28891	-131	-28891	5prime_fragment	FALSE	canonical	3	20	junction_4	3.69966214673719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTGTTGGCTATATT	-45750311	True	NA	-2	True	AATAAA	-19	NA	45750784	45727601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_37941.known	chr17	+	2482	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	9.84160265694276	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	2303123	True	NA	7	True	AATAAA	-24	NA	2303949	2325260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
transcript_37944.nic	chr17	-	1350	6	ISM	ENSG00000167721.11	ENST00000301364.10	4245	15	-12	10994	-12	0	5prime_fragment	FALSE	canonical	3	554	junction_1	45.3942727665066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTCCATTTCTCAAAA	-2321791	True	NA	0	True	AATAAA	-17	NA	2336469	2333389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_3795.known	chr1	+	1465	3	FSM	ENSG00000159596.7	ENST00000372025.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	8.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	45680714	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45688276_45690973_45691111_45693203
transcript_37954.nnic	chr17	-	1918	7	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.2703634325652	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508402	True	NA	-7	True	AATAAA	-33	NA	2511914	2416048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_2417174_2464298_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_37957.nnic	chr17	-	1523	4	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.8045985501857	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508402	True	NA	-7	True	AATAAA	-33	NA	2511914	2416048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_2417174_2477771_2477886_2502203_2502332_2511758
transcript_37962.known	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	29.6292085618229	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	2589236	True	NA	19	True	ATTAAA	-15	NA	2593653	2685615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_37964.known	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	163.574047867632	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591601	True	NA	12	True	ATTAAA	-41	NA	2593946	2685608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_37969.known	chr17	+	443	2	FSM	ENSG00000262050.1	ENST00000572876.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTCGGCCGGGCGG	2712215	False	NA	NA	False	TTTAAA	-29	NA	2712308	2712833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2712400_2712481
transcript_37972.nnic	chr17	-	624	3	NIC	ENSG00000261848.5	novel	534	4	NA	NA	5	65	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTGGTTGTTCTTTTGT	-3176808	True	NA	NA	False	AATAAA	-23	NA	3176930	3134903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_3135191_3163692_3163890_3176790
transcript_37974.known	chr17	+	4139	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.98575548592841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	3635637	True	NA	NA	False	ATTAAA	-22	NA	3636759	3663103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_3798.nnic	chr1	+	1468	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	45680689	True	NA	11	True	ATTAAA	-15	NA	45688155	45694436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_45688254_45690973_45691111_45693203
transcript_37980.known	chr17	+	2417	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21.1974841274462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	3635603	True	NA	-9	True	NA	NA	NA	3636725	3661512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_37981.known	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	19.8131269616888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	3635706	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
transcript_37984.nnic	chr17	-	1244	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.304282966531	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662719	True	NA	-6	True	AATAAA	-15	NA	3668637	3662894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_3663563_3663657_3663886_3664194_3664273_3664678_3664799_3668487
transcript_37985.nnic	chr17	-	1268	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.304282966531	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662719	True	NA	-6	True	AATAAA	-15	NA	3668637	3662894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_3663567_3663637_3663886_3664194_3664273_3664678_3664799_3668487
transcript_37988.known	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	35.9289422177844	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662660	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
transcript_37991.known	chr17	-	1302	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGGCTTTGCTGAGGC	-3668669	False	NA	-7	True	AATAAA	-14	NA	3668679	3662895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3663886_3664678_3664799_3668487
transcript_37993.known	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_1	0	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	3644827	True	NA	22	True	ATTAAA	-15	NA	3668811	3669665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3668900_3669097
transcript_37994.known	chr17	+	762	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTCTTTCCTGCTG	3644837	True	NA	25	True	ATTAAA	-18	NA	3668821	3669668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3669013_3669097
transcript_37995.known	chr17	+	2490	13	FSM	ENSG00000040531.16	ENST00000381870.8	2490	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.8824421198501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTGCTCGATACAGA	3636283	True	NA	21	True	ATTAAA	-23	NA	3636458	3661542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636709_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235_3660351_3660616
transcript_37999.known	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	278.314907074702	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	-3719108	True	NA	-75	True	NA	NA	NA	3723854	3714691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
transcript_38.known	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21685	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00096_+_0_1100
transcript_38001.known	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_3	30.554141381416	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-3719091	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
transcript_38005.known	chr17	+	2797	1	FSM	ENSG00000177602.5	ENST00000325418.5	2797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATATTTATAAACCCT	3720796	True	NA	NA	False	AATAAA	-22	NA	3723902	3726699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3723900_3726700
transcript_38008.known	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	32.025597400968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-3838720	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_3801.known	chr1	+	722	2	FSM	ENSG00000159596.7	ENST00000496366.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAGTAGTTAAAAGTAG	45680729	True	NA	NA	False	NA	NA	NA	45688195	45693845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45688276_45693203
transcript_38015.nic	chr17	-	1387	3	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-17	36950	-17	-16604	5prime_fragment	FALSE	canonical	3	165	junction_1	17.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTAGTGAGTCTATGT	-3838737	True	NA	-11	True	AATAAA	-15	NA	3846263	3839107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_3840206_3843085_3843152_3846040
transcript_38016.nic	chr17	-	1925	10	ISM	ENSG00000185722.18	ENST00000574367.5	5033	25	-21	28187	2	0	5prime_fragment	FALSE	canonical	3	96	junction_2	17.6348420554591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	-4258745	True	NA	NA	False	NA	NA	NA	4263977	4194460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_38018.nnic	chr17	-	1731	7	NNC	ENSG00000185722.18	novel	948	4	NA	NA	2	9904	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	50.2582221023475	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGTTGGAGCACTTAAA	-4258745	True	NA	NA	False	AATAAA	-19	NA	4263977	4206612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_4207576_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_38019.known	chr17	-	1881	9	FSM	ENSG00000185722.18	ENST00000570934.5	1881	9	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	16.985287751463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	4242450	4194460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255
transcript_38020.known	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	28.9635786616379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
transcript_38022.nnic	chr17	+	1309	4	NNC	ENSG00000167740.10	novel	1969	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	32.9679979508749	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	4142741	True	NA	9	True	ATTAAA	-25	NA	4143196	4157697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_4143346_4149890_4150032_4154673_4154861_4156865
transcript_38024.known	chr17	+	1969	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.1233464566864	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	4142741	True	NA	9	True	ATTAAA	-25	NA	4143196	4157697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
transcript_38026.known	chr17	+	1588	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	30.7354301526214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	4142755	True	NA	42	True	TTTAAA	-29	NA	4143210	4157572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
transcript_38028.nnic	chr17	-	1735	6	NNC	ENSG00000132388.13	novel	4167	6	NA	NA	681	549	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_5	472.479671520373	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	-4347563	False	18381	-8	True	AATATA	-16	NA	4365944	4271430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4365799
transcript_38031.known	chr17	+	537	2	FSM	ENSG00000262921.1	ENST00000574133.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTCCTGGATCAGTGT	NA	False	NA	NA	False	NA	NA	NA	4565751	4571760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4565855_4571326
transcript_38034.known	chr17	-	3465	17	FSM	ENSG00000141456.16	ENST00000574876.5	3465	17	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_9	59.3806576251897	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	-4694213	True	NA	-2	True	AATAAA	-20	NA	4704129	4671384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_38039.known	chr17	+	472	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	4703968	True	NA	5	True	CATAAA	-17	NA	4704229	4705529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4704371_4705198
transcript_3804.known	chr1	-	2719	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	36.6534298927467	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-46195329	True	NA	-11	True	ATTAAA	-20	NA	46198434	46188682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_38040.nic	chr17	+	1825	15	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_13	119.133093125089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710475	False	NA	19	True	AATAAA	-15	NA	4710620	4721497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_38041.known	chr17	+	1778	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	62.8347362661184	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710486	False	NA	19	True	AATAAA	-15	NA	4710631	4721497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38042.known	chr17	+	1348	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	76.5409740600364	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGTCAATGGGG	4710484	False	NA	NA	False	NA	NA	NA	4710629	4721096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38043.known	chr17	+	1236	14	FSM	ENSG00000141480.18	ENST00000381488.10	1236	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	117.400694533393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGGTTGGGAGAGG	4708606	True	NA	NA	False	NA	NA	NA	4710692	4721061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38046.known	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	6.24819974072532	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-4739699	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_38048.known	chr17	+	652	3	FSM	ENSG00000161920.11	ENST00000575284.5	652	3	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	105.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCAAATGGTGGGCAT	4730125	True	NA	NA	False	NA	NA	NA	4731427	4733312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4731575_4731775_4731907_4732938
transcript_38049.known	chr17	+	836	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	17	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	4730125	True	NA	NA	False	AATAAA	-33	NA	4731427	4733607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4731575_4731775_4731907_4733049
transcript_3805.known	chr1	+	1849	2	FSM	ENSG00000171357.6	ENST00000371980.4	1849	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGGGATCTCACTTCC	46202573	True	NA	3	True	AATAGA	-15	NA	46203333	46221256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46203625_46219698
transcript_38051.known	chr17	+	802	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTGGTGGTGAGTA	4730128	True	NA	NA	False	NA	NA	NA	4731430	4732433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4731575_4731775
transcript_38052.known	chr17	-	698	3	FSM	ENSG00000182853.12	ENST00000328739.6	698	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	-4786258	False	18	1	True	ATTAAA	-16	NA	4786364	4785284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4785660_4785936_4786053_4786157
transcript_38054.known	chr17	+	824	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	0	0	0	0	multi-exon	FALSE	canonical	3	7142	junction_3	502.900944520887	6294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	4742593	True	NA	29	True	AATAAA	-16	NA	4796163	4798495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
transcript_38055.known	chr17	+	871	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_5	3029.86382532285	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	4742573	True	NA	36	True	AATAAA	-23	NA	4796143	4798502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
transcript_38056.known	chr17	+	3443	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_23	14.0608178006196	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	4804606	True	NA	13	True	AATAAA	-14	NA	4807151	4823430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_38060.known	chr17	+	1728	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	250.294146955138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4939879	False	NA	-11	True	NA	NA	NA	4940007	4945191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38062.nic	chr17	+	1741	11	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	71	junction_2	253.357928630623	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	NA	False	NA	20	True	AATAAA	-21	NA	4939975	4945222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4940231_4940486_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38065.nic	chr17	+	1910	11	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_2	245.288014383092	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4939858	True	NA	20	True	AATAAA	-21	NA	4939986	4945222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4940361_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38071.nic	chr17	+	1937	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-32	0	intron_retention	FALSE	canonical	3	189	junction_1	181.562967344971	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	NA	False	NA	20	True	AATAAA	-21	NA	4939975	4945222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38072.known	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	172.677033865802	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4940084	False	NA	20	True	AATAAA	-21	NA	4940267	4945222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38073.nnic	chr17	+	1484	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	229.05059013132	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4939864	True	NA	20	True	AATAAA	-21	NA	4939992	4945222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4940231_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38085.known	chr17	-	1692	8	FSM	ENSG00000108528.14	ENST00000225665.12	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_5	85.9724683030704	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCCCGGTGTGTTTC	-4940032	False	121548	3	True	TATAAA	-43	NA	4940046	4937129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
transcript_3809.nic	chr1	+	2592	18	NIC	ENSG00000085999.13	novel	2549	19	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	93.5237512160547	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTGAGAGCAGTGT	NA	False	NA	21	True	AATAAA	-14	NA	46247585	46278472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_46247747_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_38092.known	chr17	-	952	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	446.065920639041	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTGCTGCGCCTATA	-4940039	False	121548	NA	False	GGGGCT	-4	NA	4940053	4937723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
transcript_38097.known	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_5	41.7342784770505	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4940147	False	NA	-11	True	NA	NA	NA	4940380	4945191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_3810.known	chr1	+	3078	18	FSM	ENSG00000085999.13	ENST00000371975.9	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_7	39.6693949998482	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	46242905	True	NA	22	True	AATAAA	-15	NA	46247762	46278473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_38101.known	chr17	+	1453	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_1	30.4937332675919	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	4950319	True	NA	9	True	AATAAA	-17	NA	4951118	4957129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_38102.known	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	34.5734336456417	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	4951024	False	NA	11	True	AATAAA	-19	NA	4951094	4957131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_38115.known	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	30661	junction_2	679	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	-4826982	True	NA	-44	True	AATAAA	-18	NA	4948530	4945651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4945998_4946627_4946821_4948262
transcript_38116.known	chr17	-	1173	2	FSM	ENSG00000108518.8	ENST00000574872.1	1173	2	0	0	0	0	multi-exon	FALSE	canonical	3	32019	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	-4947434	False	NA	34	True	AATAAA	-3	NA	4947469	4945666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4945998_4946627
transcript_38118.known	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	366.258295317511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	-4967179	False	NA	-31	True	GGGGCT	-8	NA	4967191	4959255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
transcript_38124.known	chr17	-	431	2	FSM	ENSG00000091640.8	ENST00000570341.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCCGCGGCGGACGGA	-4966737	False	NA	NA	False	NA	NA	NA	4966749	4966237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4966320_4966400
transcript_38125.known	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	-4954793	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4966320_4967719
transcript_38126.known	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	77.3809120879016	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	-4954802	True	NA	-1	True	AATAAA	-16	NA	4967817	4959225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_38127.known	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	81.958526097045	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	-4967778	False	NA	-1	True	AATAAA	-16	NA	4967790	4959225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_38130.nnic	chr17	+	2091	4	NNC	ENSG00000262227.1	novel	551	2	NA	NA	-3	3779	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGTCATGTCACTCTCT	4987460	True	NA	NA	False	AATAAA	-19	NA	4987702	4992225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_4988226_4988415_4988593_4988686_4989034_4991181
transcript_38131.known	chr17	-	2375	5	FSM	ENSG00000132517.15	ENST00000254853.10	2375	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCTAGTGTGCAATTA	-5035404	True	NA	NA	False	ATTAAA	-17	NA	5035426	5032601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5033170_5033260_5033385_5033478_5034359_5034476_5034714_5034860
transcript_38133.nic	chr17	-	1697	5	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	47.7859812078815	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-6	True	CATAAA	-19	NA	5112051	5105734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106534_5108925_5109053_5109393_5109769_5111075_5111220_5111799
transcript_38134.known	chr17	-	1553	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	21.821720830402	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	-5109022	True	NA	-44	True	NA	NA	NA	5111845	5105772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_38139.known	chr17	-	574	5	FSM	ENSG00000167840.13	ENST00000575538.1	574	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	48.2979036812158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTCTACATTTGAAGCT	-5108992	True	NA	NA	False	NA	NA	NA	5111815	5106404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109053_5109710_5109869_5111075_5111220_5111799
transcript_38141.nic	chr17	-	1596	5	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	34.1577224065071	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCCTGTGTCTTTCT	-5109055	True	NA	-7	True	CATAAA	-18	NA	5111878	5105735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106507_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_38147.nic	chr17	-	1394	4	NIC	ENSG00000167840.13	novel	2179	5	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	54.7133946630581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	-5109069	True	NA	-6	True	CATAAA	-19	NA	5111892	5105734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106534_5108925_5109053_5109393_5109769_5111799
transcript_38157.nnic	chr17	-	1496	4	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	-33	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	31.6262900483478	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCCTGTGTCTTTCT	-5109055	True	NA	-7	True	CATAAA	-18	NA	5111878	5105735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106534_5109393_5109869_5111075_5111220_5111799
transcript_38158.known	chr17	+	474	3	FSM	ENSG00000234327.9	ENST00000413077.2	508	3	18	16	6	0	multi-exon	FALSE	canonical	3	304	junction_1	28	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTCTTTGAACATTCA	5109988	True	NA	4	True	AATAAA	-15	NA	5111931	5114377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5112119_5113385_5113453_5114157
transcript_38160.known	chr17	+	452	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	16	1	-15	-1	multi-exon	FALSE	canonical	3	93	junction_1	133.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	5109998	True	NA	9	True	AATAAA	-20	NA	5111941	5114382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5112102_5113385_5113453_5114157
transcript_38162.known	chr17	-	1907	3	FSM	ENSG00000167840.13	ENST00000574735.1	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	65.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-6	True	CATAAA	-19	NA	5112064	5105734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109769_5111799
transcript_38169.nic	chr17	+	256	2	ISM	ENSG00000234327.9	ENST00000413077.2	508	3	0	957	0	-941	5prime_fragment	FALSE	canonical	3	304	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGAATTTCAGTAT	5109970	True	NA	15	True	AATAAA	-21	NA	5111913	5113436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_5112119_5113385
transcript_38170.nic	chr17	+	1202	2	ISM	ENSG00000234327.9	ENST00000413077.2	508	3	0	11	0	-1	intron_retention	FALSE	canonical	3	304	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	5109970	True	NA	9	True	AATAAA	-20	NA	5111913	5114382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_5112119_5113385
transcript_38174.known	chr17	-	1610	4	FSM	ENSG00000167840.13	ENST00000575898.5	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	35.311313893551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	-5109018	True	NA	71	True	NA	NA	NA	5111841	5105540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106507_5108925_5109053_5109393_5109869_5111799
transcript_38175.known	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	52.083466666496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	-5122894	True	NA	-23	True	NA	NA	NA	5123102	5105634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
transcript_38176.nic	chr17	+	525	4	ISM	ENSG00000261879.8	ENST00000667038.1	1058	6	-43	16513	5	-8395	5prime_fragment	FALSE	canonical	1	3	junction_2	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	5191828	True	NA	NA	False	AATAAA	-16	NA	5192046	5215248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_5192164_5209749_5209896_5214049_5214210_5215146
transcript_38178.known	chr17	+	1058	6	FSM	ENSG00000261879.8	ENST00000667038.1	1058	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.86781592116274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATCTTGGCGGGACG	5191871	True	NA	NA	False	AATAAA	-20	NA	5192089	5231761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5192164_5209749_5209896_5214049_5214210_5215146_5215294_5223316_5223485_5231398
transcript_3818.nnic	chr1	+	1933	14	NIC	ENSG00000085999.13	novel	2549	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	143.051031569633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTGAGAGCAGTGT	46242831	True	NA	21	True	AATAAA	-14	NA	46247688	46278472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_46247747_46248511_46248599_46249999_46250120_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_38181.known	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_1	68.6894904170208	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	-5416547	True	NA	-3	True	AATAAA	-17	NA	5419662	5384832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_38197.nnic	chr17	+	1309	8	NNC	ENSG00000129197.15	novel	995	7	NA	NA	-10	26173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	269.530733547272	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTACTGGTGT	5419771	True	NA	NA	False	CATAAA	-7	NA	5419877	5459050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541_5432870_5459032
transcript_38202.known	chr17	+	995	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	205.091578460832	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	5406686	True	NA	27	True	AATAAA	-16	NA	5420181	5432877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
transcript_3821.known	chr1	-	2842	10	FSM	ENSG00000132128.18	ENST00000615587.4	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_7	35.7556867617232	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGCCCTTCTTGATG	-46298194	True	NA	-26	True	AATAAA	-14	NA	46303263	46278402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46279085_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283_46298371_46303123
transcript_38215.known	chr17	+	1394	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	280.355773973	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
transcript_38217.known	chr17	+	1471	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	303.260284244409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
transcript_38221.known	chr17	+	1688	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	201.537490308875	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
transcript_38225.known	chr17	+	1423	6	FSM	ENSG00000129197.15	ENST00000571558.5	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	280.296557238936	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5428070_5428212_5432541
transcript_38230.known	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_4	383.96770697547	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-5347187	True	NA	-25	True	CATAAA	-20	NA	5439155	5432776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
transcript_38234.known	chr17	+	815	5	FSM	ENSG00000129197.15	ENST00000327154.10	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	331.096662622866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCATTCCCTCTGAGG	5419781	True	NA	-78	True	NA	NA	NA	5419887	5432608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5432541
transcript_38236.known	chr17	+	1547	5	FSM	ENSG00000129197.15	ENST00000571043.5	1547	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_4	299.256996576521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5432541
transcript_38238.known	chr17	+	2728	5	FSM	ENSG00000129197.15	ENST00000573126.1	2728	5	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	189.454974862103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCGACATCTGTTCTT	5406704	True	NA	18	True	AAGAAA	-7	NA	5420199	5432704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5428212_5432541
transcript_3824.nnic	chr1	-	743	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	228.958996814325	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-46303327	False	NA	3	True	AATAAA	-22	NA	46303380	46296741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_46297070_46297562_46297634_46298283_46298371_46303123
transcript_38241.known	chr17	+	1282	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	360.243927776722	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
transcript_38243.known	chr17	+	1359	5	FSM	ENSG00000129197.15	ENST00000575599.5	1359	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	340.130122159153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5428070_5428212_5432541
transcript_38245.nnic	chr17	+	719	5	NNC	ENSG00000129197.15	novel	1282	5	NA	NA	-16	26173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	353.912418544475	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTACTGGTGT	5406655	True	NA	NA	False	CATAAA	-7	NA	5420150	5459050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541_5432870_5459032
transcript_38248.known	chr17	+	1057	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_3	241.960511011382	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTGGTCTTTTGTG	5419602	False	NA	29	True	AAGAAA	-18	NA	5419640	5432715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
transcript_3825.nnic	chr1	-	693	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	228.01754318473	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-46298256	True	NA	3	True	AATAAA	-22	NA	46303325	46296741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_46297075_46297562_46297634_46298283_46298371_46303123
transcript_38250.known	chr17	+	597	3	FSM	ENSG00000129197.15	ENST00000572174.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	53	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGTAAGATAGTAGTAT	5406671	True	NA	NA	False	NA	NA	NA	5420166	5423069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768
transcript_38257.nnic	chr17	-	1349	8	NNC	ENSG00000072849.11	novel	4167	7	NA	NA	32	19	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	340.886539266456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCTTTTGTGTGTGAT	-5486126	False	NA	-25	True	AATAAA	-28	NA	5486244	5474289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_5474790_5477847_5478000_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38259.nic	chr17	-	1181	8	NIC	ENSG00000072849.11	novel	657	7	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	336.906030621875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	-5486126	False	NA	-44	True	AATAAA	-9	NA	5486244	5474308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5474790_5480053_5480145_5480386_5480544_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38262.nic	chr17	-	1283	7	NIC	ENSG00000072849.11	novel	4167	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	64	junction_3	274.193362428779	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	-5480624	True	NA	-44	True	AATAAA	-9	NA	5486193	5474308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5474790_5480053_5480145_5480386_5480544_5481100_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38264.known	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	50.6557005676558	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-5480609	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38267.known	chr17	-	657	7	FSM	ENSG00000072849.11	ENST00000570848.5	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	367.467307691749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTGGACACTTTTG	-5480609	True	NA	NA	False	NA	NA	NA	5486178	5474609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38272.known	chr17	-	570	6	FSM	ENSG00000072849.11	ENST00000571476.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	305.134462163814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCTTCGCCTGGGGTG	-5480579	True	NA	NA	False	NA	NA	NA	5486148	5474726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5482808_5482883_5485150_5485217_5486068
transcript_3828.known	chr1	+	2577	19	FSM	ENSG00000085999.13	ENST00000671528.1	2577	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.7780966954817	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGTGGTAAGCC	46242842	True	NA	29	True	AATAAA	-22	NA	46247699	46278480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46247747_46248317_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_38287.known	chr17	-	589	4	FSM	ENSG00000072849.11	ENST00000572834.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	352.794872726663	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATATCCTGCCA	-5480593	True	NA	NA	False	NA	NA	NA	5486162	5474451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5485150_5485217_5486068
transcript_38288.known	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	12	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	5483823	True	NA	14	True	ATTAAA	-16	NA	5486565	5490811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5486685_5488195_5488590_5488822
transcript_38293.known	chr17	+	2204	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	5486352	True	NA	-60	True	AATGAA	-24	NA	5486395	5490737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5486685_5488822
transcript_38295.known	chr17	+	2505	3	FSM	ENSG00000167842.16	ENST00000381165.3	2505	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTATTTTCTGC	5486431	False	NA	17	True	ATTAAA	-19	NA	5486926	5490814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5487046_5488195_5488590_5488822
transcript_38296.known	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-5500170	True	NA	-2	True	AATAAA	-23	NA	5501006	5499426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5499951_5500030
transcript_38303.known	chr17	+	891	7	FSM	ENSG00000129195.16	ENST00000570337.6	891	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	325.802087163357	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCCTGTCTGACCGCCA	6436083	True	NA	NA	False	AAAAAG	-22	NA	6444442	6450365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703_6449779_6450027_6450073_6450361
transcript_38307.known	chr17	+	831	6	FSM	ENSG00000129195.16	ENST00000573557.5	831	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	313.339177250468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTCGTCAGTACCCCT	6436082	True	NA	NA	False	NA	NA	NA	6444441	6450441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445343_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_38312.known	chr17	+	1908	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.919475303614	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	6436095	True	NA	5	True	AATAAA	-18	NA	6444454	6451469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_38314.known	chr17	+	1002	5	FSM	ENSG00000129195.16	ENST00000571373.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	334.343386356004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTCTGATCTTGTGTA	6436083	True	NA	NA	False	NA	NA	NA	6444442	6449938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703
transcript_38316.known	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	335.540887970453	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	6436081	True	NA	23	True	AATAAA	-17	NA	6444440	6451065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
transcript_38323.known	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1506.06647337434	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	6640888	False	NA	-8	True	NA	NA	NA	6640984	6643067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
transcript_38325.known	chr17	+	459	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1575.43736431789	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGGCATGTGT	6629682	True	NA	12	True	AATAAA	-41	NA	6641015	6643114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
transcript_38326.known	chr17	+	505	4	FSM	ENSG00000129235.11	ENST00000573792.5	505	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1574.51163504399	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCATGTGTCTAAAC	6641446	False	NA	18	True	AATAAA	-12	NA	6641465	6643120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641643_6641752_6641835_6642248_6642325_6642950
transcript_38327.known	chr17	-	619	4	FSM	ENSG00000108590.11	ENST00000574128.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	52.8540968663315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAATTGTTCTTTGATTT	-6651399	False	NA	-28	True	AATAGA	-15	NA	6651427	6644294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651348
transcript_38328.known	chr17	-	1629	4	FSM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.8859335970941	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGGTGTGCTCTGCA	-6649088	True	NA	NA	False	AATAAA	-22	NA	6651605	6643310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651500
transcript_3833.known	chr1	+	537	4	FSM	ENSG00000173660.12	ENST00000311672.10	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	5722	junction_2	806.007581988049	13724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204101	True	NA	18	True	AATAAA	-19	NA	46303697	46316776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100_46309128_46310154_46310317_46316551
transcript_38333.known	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	67	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	-6649117	True	NA	-12	True	AATAGA	-31	NA	6651634	6644278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6644660_6650355_6650434_6651500
transcript_38334.known	chr17	-	620	2	FSM	ENSG00000108590.11	ENST00000575519.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTTTTGTTATCA	-6649058	True	NA	NA	False	AATAGA	-41	NA	6651575	6649888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6650434_6651500
transcript_38335.known	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2916	junction_3	304.055185049615	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	6629726	True	NA	-47	True	NA	NA	NA	6641059	6644541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
transcript_38336.known	chr17	+	518	4	FSM	ENSG00000129235.11	ENST00000577146.5	518	4	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_1	1524.0910588136	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGCATGTGTCTAAA	6641288	True	NA	17	True	AATAAA	-11	NA	6641307	6643119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641499_6641752_6641835_6642248_6642325_6642950
transcript_38337.known	chr17	+	616	4	FSM	ENSG00000129235.11	ENST00000574734.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1430.35753106231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGGCATGTGTCT	6629700	True	NA	14	True	AATAAA	-43	NA	6641033	6643116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641228_6641752_6641933_6642248_6642325_6642950
transcript_38338.known	chr17	+	700	4	FSM	ENSG00000274114.2	ENST00000603173.6	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	6656973	True	NA	NA	False	AATAAA	-13	NA	6657303	6658491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6657405_6657644_6657784_6657861_6657985_6658154
transcript_38339.known	chr17	+	1009	4	FSM	ENSG00000274114.2	ENST00000634558.1	1009	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACACACACC	6656829	False	NA	NA	False	AAAAAG	-36	NA	6657033	6693211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6657405_6657644_6657784_6689875_6690028_6692864
transcript_3834.known	chr1	+	674	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	3267.92895998368	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204112	True	NA	18	True	AATAAA	-19	NA	46303708	46316776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
transcript_38343.nnic	chr17	+	631	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-11	-8274	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGATGCTTGTCTCT	6656962	True	NA	NA	False	AATAAA	-15	NA	6657292	6684937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_6657405_6657644_6657784_6684557
transcript_3835.known	chr1	+	553	4	FSM	ENSG00000173660.12	ENST00000489056.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3178.42564102978	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204101	True	NA	18	True	AATAAA	-19	NA	46303697	46316776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100_46309144_46310154_46310317_46316551
transcript_38352.known	chr17	-	1224	1	FSM	ENSG00000215067.11	ENST00000666062.1	1224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTAGTTCTTGTCCATT	-7012515	False	NA	NA	False	AATAAA	-22	NA	7012530	7011306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7011300_7012500
transcript_38353.known	chr17	+	2392	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	3.9102353929658	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGTCTTCTTTTGGT	6995816	True	NA	22	True	AATAAA	-35	NA	6996048	7010754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
transcript_3836.known	chr1	+	687	2	FSM	ENSG00000173660.12	ENST00000486951.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	5759	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	46204110	True	NA	NA	False	NA	NA	NA	46303706	46309673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100
transcript_38368.known	chr17	+	952	4	FSM	ENSG00000219200.12	ENST00000546395.5	952	4	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	622.737148045269	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	7012379	True	NA	28	True	AATAAA	-7	NA	7012460	7014520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012762_7013318_7013517_7013665_7013743_7014144
transcript_38369.known	chr17	+	783	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	640.056768315645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	7001484	True	NA	27	True	AATAAA	-6	NA	7012647	7014519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
transcript_38370.known	chr17	+	591	3	FSM	ENSG00000219200.12	ENST00000552039.2	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	552.5	2429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7001468	True	NA	40	True	AATAAA	-19	NA	7012631	7014532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012758_7013665_7013743_7014144
transcript_38374.known	chr17	+	595	3	FSM	ENSG00000219200.12	ENST00000552842.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	689.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGTGTCTGTGCTTG	7001482	True	NA	38	True	AATAAA	-17	NA	7012645	7014530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012778_7013665_7013743_7014144
transcript_38375.known	chr17	+	739	3	FSM	ENSG00000219200.12	ENST00000552321.2	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	649.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	7013151	False	NA	28	True	AATAAA	-7	NA	7013230	7014520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7013517_7013665_7013743_7014144
transcript_38376.known	chr17	+	760	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	274.536427455447	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	7001902	True	NA	17	True	AATAAA	-13	NA	7014768	7017519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
transcript_38377.known	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	287.05661462506	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	7001886	True	NA	4	True	AAAACA	-5	NA	7014752	7017506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
transcript_38378.known	chr17	+	850	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	91.3993435425003	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001915	True	NA	18	True	AATAAA	-14	NA	7014781	7017520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_38379.known	chr17	+	1485	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7001482	True	NA	40	True	AATAAA	-19	NA	7012645	7014532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7013743_7014144
transcript_38380.known	chr17	+	779	5	FSM	ENSG00000258315.5	ENST00000552775.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	207.092370694818	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7002173	False	NA	18	True	AATAAA	-14	NA	7015039	7017520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
transcript_38381.known	chr17	+	3527	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	4.9749371855331	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	7022864	True	NA	23	True	AATAAA	-18	NA	7023049	7029644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
transcript_38385.known	chr17	-	927	2	FSM	ENSG00000174326.15	ENST00000573338.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCCCAATAAAGAATTTT	NA	False	NA	-54	True	NA	NA	NA	7043606	7041658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7041909_7042929
transcript_38386.known	chr17	-	944	8	FSM	ENSG00000141505.12	ENST00000380920.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.7797997028077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	-7177942	False	NA	NA	False	NA	NA	NA	7178116	7173552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178084
transcript_38387.nnic	chr17	-	1095	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	10.7797997028077	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7178008	True	NA	-5	True	AGTAAA	-17	NA	7178182	7173430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178121
transcript_38388.nnic	chr17	-	1092	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	10.4939243841183	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7178011	True	NA	-5	True	AGTAAA	-17	NA	7178185	7173430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178127
transcript_3839.known	chr1	+	4347	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.62168800331654	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	46339945	True	NA	12	True	AATAAA	-14	NA	46340806	46365018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
transcript_38390.nnic	chr17	-	1070	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	13.0274435602034	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7178011	True	NA	-5	True	AGTAAA	-17	NA	7178185	7173430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7177002_7177077_7177209_7177327_7178127
transcript_38392.nic	chr17	-	1888	7	ISM	ENSG00000141505.12	ENST00000380920.8	944	8	-64	-122	-64	0	intron_retention	FALSE	canonical	3	21	junction_5	6.6248689714506	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7178006	True	NA	-5	True	AGTAAA	-17	NA	7178180	7173430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
transcript_38401.known	chr17	+	562	2	FSM	ENSG00000072778.20	ENST00000578033.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	900	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	7224621	False	NA	15	True	AATAAA	-17	NA	7224632	7225266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7224885_7224956
transcript_38402.known	chr17	-	2989	15	FSM	ENSG00000004975.12	ENST00000005340.10	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_11	39.1543908971984	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-7210369	False	7486	-3	True	AATAAA	-18	NA	7234517	7225341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230156_7230284_7230431_7230727_7230798_7234068
transcript_38405.known	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	232.270316657123	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	-7239429	False	24148	-22	True	AATAAA	-26	NA	7239439	7235028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
transcript_38409.known	chr17	-	1662	5	FSM	ENSG00000040633.13	ENST00000454255.6	1662	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	262.314100840957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCCCCTCCCTCATCT	-7238920	False	NA	-27	True	TATAAA	-18	NA	7238930	7235286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7238785
transcript_38410.known	chr17	-	1978	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	77.7383431776109	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-7239447	False	24148	-31	True	AATAAA	-17	NA	7239457	7235037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
transcript_3842.known	chr1	+	4344	5	FSM	ENSG00000117481.11	ENST00000307089.7	4344	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	27.6981497577004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGTGAGTATTAATG	46339927	True	NA	NA	False	NA	NA	NA	46340788	46365152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46340920_46344800_46345145_46352867_46353029_46360703_46360829_46361569
transcript_38424.known	chr17	-	1944	4	FSM	ENSG00000040633.13	ENST00000576955.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	276.241842514047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-7239445	False	24148	-31	True	AATAAA	-17	NA	7239455	7235037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7239245
transcript_38425.known	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	59	junction_1	433.064083017745	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	7251761	True	NA	NA	False	AATAAA	-19	NA	7252052	7259931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_38426.known	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	437.872966024394	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7252031	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_38428.known	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	132	junction_7	431.921241875962	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_38429.known	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	458.592653912186	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7245170	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
transcript_3843.nnic	chr1	+	1979	16	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	73.0866760923099	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46393670	True	NA	NA	False	AAGAAA	-3	NA	46393779	46413845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46405870_46405953_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_38430.known	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	419.015226453646	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_38435.known	chr17	+	671	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	424.850561962674	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	7251764	True	NA	37	True	AATAAA	-27	NA	7252055	7254913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_38436.known	chr17	+	473	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	447.022370804863	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	7252036	False	NA	NA	False	NA	NA	NA	7252236	7254633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_38440.known	chr17	-	605	5	FSM	ENSG00000181885.18	ENST00000575313.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	525.585863584629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTGGGAGGTGCAC	-7262599	True	NA	NA	False	NA	NA	NA	7263200	7260488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262086_7263158
transcript_38443.known	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	507.919961706567	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	-7262612	True	NA	-40	True	AATAAA	-19	NA	7263213	7260136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
transcript_3845.nnic	chr1	+	1897	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	49.8076401810823	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46393670	True	NA	NA	False	AAGAAA	-3	NA	46393779	46413845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_38451.known	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_1	87.7319148821504	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	7251791	False	NA	30	True	AATAAA	-20	NA	7252375	7254906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
transcript_38455.known	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	863.472446964387	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	-7240718	False	24148	5	True	AATAAA	-32	NA	7241819	7240407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
transcript_38457.known	chr17	-	568	4	FSM	ENSG00000170296.10	ENST00000571129.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_3	914.300096613069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCTGCTGTAGACTTC	-7241966	False	NA	NA	False	NA	NA	NA	7242156	7240627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242078
transcript_38459.known	chr17	-	1319	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1594	junction_3	182.410404186701	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTTGGCTAGACTTTT	-7218301	True	NA	NA	False	AGTAAA	-20	NA	7242449	7240007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
transcript_38461.known	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_3	59.2002252247968	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	-7245196	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
transcript_38466.known	chr17	-	583	3	FSM	ENSG00000170296.10	ENST00000570856.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	1005.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCTGTTCCCTTTC	-7218210	True	NA	NA	False	NA	NA	NA	7242358	7240573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7242240
transcript_38468.known	chr17	+	1768	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	1.03040205505508	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGCATTAATACTACAA	7281309	False	NA	-9	True	AATAAA	-8	NA	7281735	7286151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
transcript_38478.known	chr17	-	1176	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_10	161.519070081523	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-7310197	True	NA	-6	True	AATAAA	-16	NA	7315360	7312660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
transcript_38499.known	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1582.7940611463	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7305682	True	NA	-34	True	AATAAA	-28	NA	7306998	7312463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_38504.known	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	260.314117942151	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7104202	True	NA	-34	True	AATAAA	-28	NA	7307627	7312463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_38506.known	chr17	+	1089	6	FSM	ENSG00000132507.18	ENST00000573542.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1584.39305729355	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTGGGGACCAGCCC	7104176	True	NA	NA	False	NA	NA	NA	7307601	7312244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307753_7309596_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_38508.known	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	1355.76065734332	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7299945	True	NA	-42	True	AATAAA	-20	NA	7307973	7312455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_38510.known	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1572.00089058499	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7306544	True	NA	-42	True	AATAAA	-20	NA	7308370	7312455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_38514.known	chr17	+	811	5	FSM	ENSG00000132507.18	ENST00000572815.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	287.704166636495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGAGCCTGGCCTGGCT	7104156	True	NA	NA	False	NA	NA	NA	7307581	7311868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311652_7311821
transcript_38520.known	chr17	+	1366	7	FSM	ENSG00000132507.18	ENST00000571955.5	1366	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1864.93732393939	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7299945	True	NA	-42	True	AATAAA	-20	NA	7307973	7312455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7308114_7308480_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_38522.known	chr17	+	2511	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_1	18.405855323893	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7335141	True	NA	21	True	ATTAAA	-21	NA	7336528	7351477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_38532.known	chr17	+	761	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	10.5237825899246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	7335209	True	NA	NA	False	ACTAAA	-14	NA	7336596	7342753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
transcript_38534.known	chr17	+	320	3	FSM	ENSG00000072818.12	ENST00000571471.5	320	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGGTTCACTTCTTG	NA	False	NA	20	True	ATTAAA	-20	NA	7350316	7351476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7350405_7350949_7351000_7351294
transcript_38535.known	chr17	+	274	3	FSM	ENSG00000072818.12	ENST00000570504.5	274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7350372	False	NA	21	True	ATTAAA	-21	NA	7350389	7351477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7350431_7350949_7351000_7351294
transcript_38536.known	chr17	+	412	3	FSM	ENSG00000072818.12	ENST00000574499.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7350403	False	NA	21	True	ATTAAA	-21	NA	7350420	7351477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7350600_7350949_7351000_7351294
transcript_38540.known	chr17	-	1740	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	98.2554776533547	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386288	False	75	0	True	TATAAA	-26	NA	7394842	7389726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_38549.known	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1230	junction_3	29.5334085777823	989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-7395543	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
transcript_38554.known	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	37.7380444644393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	7444767	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_38555.nic	chr17	+	2282	10	NIC	ENSG00000170175.11	novel	2560	11	NA	NA	-29	-97	combination_of_known_junctions	TRUE	canonical	3	27	junction_6	45.72488854113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7445014	False	NA	23	True	AATAAA	-32	NA	7445031	7457613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_38556.known	chr17	+	1623	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	14.5381575411521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	7444933	True	NA	NA	False	NA	NA	NA	7445502	7456926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_38558.nic	chr17	+	2115	9	NIC	ENSG00000170175.11	novel	1623	10	NA	NA	-15	-97	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	33.6616900199619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7444918	True	NA	23	True	AATAAA	-32	NA	7445487	7457613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_3856.nic	chr1	+	712	2	FSM	ENSG00000232022.8	ENST00000692135.1	718	2	0	6	0	-6	multi-exon	FALSE	canonical	3	29	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCCTCATGATCTCTGG	46442369	True	NA	1	True	AATAAA	-16	NA	46442829	46445702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46443038_46445198
transcript_38562.known	chr17	+	928	5	FSM	ENSG00000161958.11	ENST00000575235.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	30.8463936303744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTGGGCCTAGGAGG	7437647	True	NA	NA	False	GGGGCT	-32	NA	7438272	7443331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_38564.known	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	26.8374738006393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	7439965	True	NA	-15	True	NA	NA	NA	7440742	7444902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_38565.nnic	chr17	+	2404	5	NNC	ENSG00000161958.11	novel	2315	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	35.3438467063222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	7440030	True	NA	20	True	ATTAAA	-20	NA	7440807	7444937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_7440936_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_38566.nic	chr17	+	2634	4	ISM	ENSG00000161958.11	ENST00000575082.5	2315	5	-1	-35	0	0	intron_retention	FALSE	canonical	3	26	junction_1	30.9012764928714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	7439964	True	NA	20	True	ATTAAA	-20	NA	7440741	7444937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593
transcript_3857.known	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	46442463	True	NA	7	True	AATAAA	-21	NA	46442923	46482493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46443038_46482209
transcript_38573.known	chr17	+	1811	6	FSM	ENSG00000161955.17	ENST00000338784.9	1811	6	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	3.65513337649941	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	7558735	False	NA	10	True	AATAAA	-16	NA	7558749	7561601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_38584.known	chr17	+	1705	6	FSM	ENSG00000129226.14	ENST00000250092.11	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.46969384566991	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTATGCCTTCC	7579591	False	NA	NA	False	ATTAAA	-20	NA	7579637	7582111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7579727_7579809_7580328_7580465_7580586_7580710_7580784_7580895_7581067_7581377
transcript_38586.known	chr17	-	838	6	FSM	ENSG00000141504.12	ENST00000575826.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	143.328154945217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAGGGTTAGGGGTGCC	-7623650	True	NA	-110	True	NA	NA	NA	7627796	7626341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626706_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627556
transcript_3859.known	chr1	-	2719	14	FSM	ENSG00000079277.22	ENST00000371946.9	2719	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	54.5422044934555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-46602430	True	NA	-11	True	AATAAA	-13	NA	46604214	46557417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46571416_46571540_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_38592.known	chr17	-	860	6	FSM	ENSG00000141504.12	ENST00000571074.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	124.179547430324	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTAGGGGTGCCTATCC	-7623713	True	NA	-105	True	NA	NA	NA	7627859	7626336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627556
transcript_38593.known	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	65.6396221805092	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623675	True	NA	-2	True	AATAAA	-20	NA	7627821	7626233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
transcript_38595.known	chr17	+	900	5	FSM	ENSG00000129255.16	ENST00000574558.1	900	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	178.353581405028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAGAGTGGAGGGACTG	7579922	False	NA	NA	False	NA	NA	NA	7583894	7587938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_38598.known	chr17	-	582	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	111.126898184013	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCCCAAGATCTGAC	-7623730	True	NA	NA	False	NA	NA	NA	7627876	7626533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
transcript_38599.known	chr17	-	640	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	108.544921576276	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGACTACGTCCACAG	-7623659	True	NA	NA	False	NA	NA	NA	7627805	7626387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
transcript_38605.known	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	80	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7590055	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7588547_7589143_7589739_7589986
transcript_38606.known	chr17	-	679	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	259	504	12	-497	multi-exon	FALSE	canonical	3	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTGGACAGGACAGGA	-7583501	False	199	NA	False	NA	NA	NA	7583518	7582471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582532_7582899
transcript_38607.known	chr17	-	725	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	8	12	-1	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGACTGCATTATCTC	-7584069	False	1646	-9	True	AATAAA	-16	NA	7584086	7581975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582532_7583917
transcript_38608.known	chr17	-	287	2	FSM	ENSG00000233223.4	ENST00000572046.2	1058	2	732	39	520	-37	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCGTCACATTTAATAA	-7581364	False	NA	-45	True	CATAAA	-35	NA	7583010	7582011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582164_7582875
transcript_38609.known	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7588448	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7588547_7589143
transcript_3861.known	chr1	-	2686	13	FSM	ENSG00000079277.22	ENST00000650508.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	38.1454635427188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-46602510	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_38610.known	chr17	-	1563	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623650	True	NA	-2	True	AATAAA	-20	NA	7627796	7626233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626200_7627800
transcript_38611.known	chr17	+	1758	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	0	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	1273.99711538135	4295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	7340154	True	NA	27	True	AATAAA	-18	NA	7572824	7579006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_38612.known	chr17	+	1319	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	4294.18104066421	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	7340166	True	NA	41	True	AATAAA	-35	NA	7572836	7578641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
transcript_38613.known	chr17	+	577	6	FSM	ENSG00000161960.16	ENST00000585024.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_1	5655.13404262003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTCAAGGACCAGATCT	7340157	True	NA	NA	False	AATACA	-44	NA	7572827	7577110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574265_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055
transcript_38614.known	chr17	+	1645	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_9	4336.00741708172	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	7340171	True	NA	11	True	AATAAA	-2	NA	7572841	7578990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
transcript_38615.known	chr17	+	1645	5	FSM	ENSG00000129255.16	ENST00000577088.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_4	27.3895509273153	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATAATACAAAACTGTT	7579879	True	NA	-22	True	AATAAA	-15	NA	7583851	7588177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7587272_7587425
transcript_38616.known	chr17	+	1311	8	FSM	ENSG00000129214.15	ENST00000340624.9	1311	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.0303814862217	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTATTCATTTATTCA	7627865	False	NA	NA	False	ATTAAA	-30	NA	7627968	7633382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7628152_7630415_7630508_7630679_7630870_7631199_7631362_7631588_7631749_7631878_7632016_7632751_7632960_7633203
transcript_38617.known	chr17	+	3341	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	19.437220880454	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	7647020	True	NA	16	True	AATAAA	-41	NA	7650925	7657770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_3862.nic	chr1	-	2658	13	NIC	ENSG00000079277.22	novel	2661	13	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	42.2238577899588	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTCCTTTTTTTTT	-46602523	True	NA	0	True	AATAAA	-24	NA	46604307	46557406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_38620.known	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	18.5280867873615	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	7686478	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_38623.known	chr17	-	2506	11	FSM	ENSG00000141510.18	ENST00000445888.6	2506	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	98.9664589646411	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	-7681541	True	NA	-12	True	AATAAA	-13	NA	7687487	7668420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676620_7687376
transcript_38628.known	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	17.763883459299	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_38629.known	chr17	-	2639	10	FSM	ENSG00000141510.18	ENST00000610292.4	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_9	47.1336424108468	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	-7681535	True	NA	7	True	AATAAA	-32	NA	7687481	7668401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676623_7687376
transcript_38639.known	chr17	-	1112	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTACAATTCTTTTTG	-7680425	False	NA	-52	True	AATAAA	-14	NA	7686371	7685259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7685300_7686400
transcript_3864.nic	chr1	-	2614	12	NIC	ENSG00000079277.22	novel	2686	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	36.5273587039126	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-46602482	True	NA	-1	True	AATAAA	-23	NA	46604266	46557407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_38640.known	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	7854735	True	NA	5	True	AATAAA	-17	NA	7855065	7856099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7855285_7855444
transcript_38641.known	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	7857729	True	NA	11	True	AATAAA	-18	NA	7858002	7862282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
transcript_38645.known	chr17	+	538	3	FSM	ENSG00000182224.12	ENST00000574196.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATCCGGGATGAGGAG	7858192	True	NA	NA	False	NA	NA	NA	7858284	7859505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7858480_7858605_7858825_7859381
transcript_38647.known	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855408	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7856844_7856984_7857199_7857382
transcript_38648.known	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	125.5	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855405	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7856844_7857014_7857199_7857382
transcript_3865.known	chr1	-	1270	12	FSM	ENSG00000079277.22	ENST00000428112.7	1270	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	41.8896622289186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCTGATGGCCTCT	-46602471	True	NA	NA	False	NA	NA	NA	46604255	46558698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_38650.known	chr17	-	424	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	-7854888	True	NA	-18	True	NA	NA	NA	7857263	7856698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7856844_7856984
transcript_38652.known	chr17	+	2783	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	26.7253982866532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	7933058	False	NA	23	True	AATAAA	-17	NA	7933079	7949578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
transcript_38653.known	chr17	+	3769	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_17	37.6227620227732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	7929690	True	NA	21	True	AATAAA	-15	NA	7932154	7949576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
transcript_38657.known	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	465.898594116788	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	-7931976	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
transcript_38659.known	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_2	26.2339898266013	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	-7919485	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
transcript_38660.known	chr17	-	648	4	FSM	ENSG00000170043.12	ENST00000571739.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	546.798561324613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTGAGCGTGTTGGTT	-7919501	True	NA	-6	True	AATAAA	-17	NA	7931962	7930347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931730_7931830_7931939
transcript_38661.known	chr17	-	409	4	FSM	ENSG00000170043.12	ENST00000572656.2	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	499.681454084055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCACTGGGATCAAAGT	-7932100	False	NA	NA	False	NA	NA	NA	7932123	7931094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7931150_7931505_7931577_7931730_7931830_7931939
transcript_38662.known	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	-7919460	True	NA	NA	False	NA	NA	NA	7931921	7930503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931730
transcript_38664.known	chr17	+	1804	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	8079236	True	NA	NA	False	AATAAA	-19	NA	8079481	8081565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8079525_8079804
transcript_38671.known	chr17	-	2126	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	36.0104151600617	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTCTAAGATCTTTT	-8161626	True	NA	-2	True	AATAAA	-18	NA	8162948	8159148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
transcript_38674.known	chr17	-	557	4	FSM	ENSG00000220205.9	ENST00000481878.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	37.3214266727424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTATTTAGCCTGCATT	-8161626	True	NA	NA	False	NA	NA	NA	8162948	8161318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8162877
transcript_38675.known	chr17	-	2263	5	FSM	ENSG00000179029.15	ENST00000437139.7	2263	5	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_3	1.6583123951777	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTTATTGAGTACCT	-8175385	True	NA	-43	True	NA	NA	NA	8176380	8172456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8174519_8174617_8175756_8175858_8175958_8176027_8176199
transcript_38677.known	chr17	-	756	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.536824204563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACTTATATACAGT	-8175404	True	NA	-12	True	AATAAA	-17	NA	8176399	8174000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
transcript_38680.known	chr17	-	455	3	FSM	ENSG00000179029.15	ENST00000431792.2	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTAAGACTTATATACA	-8175321	False	NA	-14	True	AATAAA	-15	NA	8176316	8174002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8175958_8176027_8176199
transcript_38682.known	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	-8175378	True	NA	NA	False	NA	NA	NA	8176373	8173741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8175858_8175958_8176027_8176199
transcript_38683.known	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	-8175378	True	NA	-25	True	AATACA	-3	NA	8176373	8173236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8176199
transcript_38688.known	chr17	-	726	5	FSM	ENSG00000179029.15	ENST00000533070.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.8890665368072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-8175393	True	NA	-10	True	AATAAA	-19	NA	8176388	8173998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8174540_8174617_8175756_8175876_8175958_8176027_8176199
transcript_38689.nnic	chr17	-	1325	3	Genic_Genomic	ENSG00000271002.1	novel	315	1	NA	NA	-791	7843	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCTTTGGCTATGTGT	-8199939	False	NA	NA	False	AATAAA	-45	NA	8200228	8191279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr17_-_8192501_8199212_8199289_8200200
transcript_38711.known	chr17	-	1243	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	0	0	0	multi-exon	TRUE	canonical	3	770	junction_8	125.652298029125	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	-8190797	True	NA	-8	True	AATAAA	-22	NA	8210575	8204733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_38716.nnic	chr17	-	1183	9	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	353.28102747671	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	NA	False	NA	-8	True	AATAAA	-22	NA	8210657	8204733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_38719.nic	chr17	-	1229	9	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	353.28102747671	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	NA	False	NA	-8	True	AATAAA	-22	NA	8210657	8204733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_38728.known	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	370.090667324666	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-8190803	True	NA	-17	True	AATAAA	-13	NA	8210581	8204742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
transcript_3874.nic	chr1	-	725	6	ISM	ENSG00000079277.22	ENST00000371945.10	2661	13	2	17419	2	0	5prime_fragment	FALSE	canonical	3	113	junction_2	31.7048892128643	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-46602482	True	NA	-1	True	AATAAA	-20	NA	46604266	46574825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_3875.nic	chr1	-	724	6	ISM	ENSG00000079277.22	ENST00000496619.6	738	8	-13	6370	-13	0	5prime_fragment	FALSE	canonical	3	47	junction_5	51.6643010211113	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-46602523	True	NA	-1	True	AATAAA	-20	NA	46604307	46574825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_38763.known	chr17	+	831	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	72.6476943887416	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	8286735	True	NA	NA	False	AATAAA	-17	NA	8288669	8290087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
transcript_38766.known	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.77263412660235	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-8294956	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_38767.known	chr17	+	1074	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_3	19.8662192343351	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	8286719	True	NA	NA	False	AATAAA	-20	NA	8288653	8290090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
transcript_38768.known	chr17	+	749	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	197.053856146542	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286736	True	NA	NA	False	AATAAA	-22	NA	8288670	8290092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
transcript_38770.known	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286743	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257
transcript_38773.known	chr17	+	607	2	FSM	ENSG00000108961.14	ENST00000578849.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAGGAAAACCAGCAGG	8286764	True	NA	NA	False	NA	NA	NA	8288698	8289395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955
transcript_38780.known	chr17	-	563	4	FSM	ENSG00000161970.15	ENST00000584343.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	6373.85688226176	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAACTGGACAAAGACC	-8382963	False	NA	-68	True	NA	NA	NA	8383009	8377678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382774
transcript_38781.known	chr17	-	763	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	6195.7682511713	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	-8221707	True	NA	62	True	AATAAA	-15	NA	8383166	8377548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
transcript_38787.known	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-8376658	False	161459	NA	False	GATAAA	-1	NA	8376704	8358821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8370387_8375899
transcript_38788.known	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	9272	junction_3	2286.31406416529	20665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-8221734	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
transcript_38789.known	chr17	-	564	4	FSM	ENSG00000161970.15	ENST00000583011.6	564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6492.96836756673	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTGTTTTGTGTGTG	-8221754	True	NA	88	True	AATAAA	-41	NA	8383213	8377522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382339_8383156
transcript_38791.known	chr17	-	7694	42	FSM	ENSG00000133026.14	ENST00000379980.8	7694	42	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	252.555342590077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-8611398	True	NA	-2	True	AATAAA	-38	NA	8630761	8474206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576670_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_38792.known	chr17	-	7662	41	FSM	ENSG00000133026.14	ENST00000269243.8	7662	41	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_36	158.909012881586	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	-8611398	True	NA	-7	True	AATAAA	-33	NA	8630761	8474211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_38797.nic	chr17	-	939	6	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	4	2696	-4	1949	5prime_fragment	FALSE	canonical	3	69	junction_1	325.560194126985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGCTTAGAGCCTTAT	-8629323	False	NA	-3	True	ATTAAA	-19	NA	8630765	8576509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_38798.nic	chr17	-	1111	4	ISM	ENSG00000133026.14	ENST00000685736.1	2417	6	44	25936	-1	-25936	5prime_fragment	FALSE	canonical	3	122	junction_3	364.242593152787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAAGTTGGTTGATTT	-8611363	True	NA	-15	True	AATAAA	-13	NA	8630726	8604394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8604983_8622901_8623278_8623423_8623498_8630653
transcript_38799.nic	chr17	-	1076	3	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	4	30581	-4	-25936	5prime_fragment	FALSE	canonical	3	721	junction_2	91.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAAGTTGGTTGATTT	-8629323	False	NA	-15	True	AATAAA	-13	NA	8630765	8604394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8604983_8622901_8623278_8630653
transcript_3880.nic	chr1	-	540	4	ISM	ENSG00000079277.22	ENST00000528077.6	1557	11	2	22047	2	0	5prime_fragment	FALSE	canonical	3	127	junction_3	27.9324582201822	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-46602482	True	NA	0	True	AATAAA	-19	NA	46604266	46580439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604184
transcript_38800.nic	chr17	+	2471	10	NIC	ENSG00000166579.16	novel	2352	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	91.4999831343167	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	8431513	True	NA	19	True	AATAAA	-19	NA	8435851	8468163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_8436046_8444259_8444358_8444953_8445041_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_38801.known	chr17	+	1858	10	FSM	ENSG00000166579.16	ENST00000402554.7	1858	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	94.3713442591762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGCACACACAGGCC	8431569	True	NA	NA	False	NA	NA	NA	8435907	8467658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8463319_8463355_8466929
transcript_38805.known	chr17	+	2352	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	22.4220873247787	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	8431545	True	NA	19	True	AATAAA	-19	NA	8435883	8468163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_38809.known	chr17	+	454	4	FSM	ENSG00000166579.16	ENST00000585098.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	109.91309698525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCGCAAGGTGATACATAC	8431555	True	NA	NA	False	NA	NA	NA	8435893	8467269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8436046_8444259_8444358_8445710_8445796_8467150
transcript_3881.nic	chr1	-	539	4	ISM	ENSG00000079277.22	ENST00000496619.6	738	8	-13	11984	-13	0	5prime_fragment	FALSE	canonical	3	47	junction_3	65.3044153688452	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-46602523	True	NA	0	True	AATAAA	-19	NA	46604307	46580439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604226
transcript_38813.known	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	46.3645712736326	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	-9571083	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
transcript_38815.known	chr17	-	731	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	190.720927593755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAAAGCTCTGACCTC	-9571100	True	NA	-17	True	AATAAA	-2	NA	9575837	9250486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
transcript_38818.known	chr17	-	638	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	173.097198128681	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTGCATTGCTTCA	-9571098	True	NA	-2	True	AATAAA	-17	NA	9575835	9250471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
transcript_3882.known	chr1	-	584	3	FSM	ENSG00000079277.22	ENST00000468852.2	584	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	62.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGCAGAAGTATATGAA	-46602486	True	NA	NA	False	ATTAAA	-30	NA	46604270	46593522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46593853_46594112_46594281_46604184
transcript_38822.known	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	28.5685141370706	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-10688738	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
transcript_38823.known	chr17	-	1601	6	FSM	ENSG00000133028.12	ENST00000577427.1	1601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.794071030459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTTGCTGTTCAGAC	-10688735	True	NA	-23	True	AGTAAA	-5	NA	10697530	10680353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692856_10692962_10695740_10695832_10697234
transcript_38826.known	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	7.95989949685296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-10729637	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
transcript_3883.known	chr1	-	464	3	FSM	ENSG00000079277.22	ENST00000465783.6	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGCTGTATTCACTG	-46592496	False	NA	6	True	AATAAA	-25	NA	46594280	46580433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46580628_46583227_46583330_46594112
transcript_38830.known	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.6450540489952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-10729637	True	NA	NA	False	NA	NA	NA	10730023	10714675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
transcript_38831.known	chr17	+	1534	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.94392028877595	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTATACTTGGATTTTT	10696853	True	NA	NA	False	NA	NA	NA	10697593	10711558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
transcript_38832.known	chr17	+	1277	4	FSM	ENSG00000170222.12	ENST00000468843.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.71547606649408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGCTTGCATAACAAAAT	10696873	True	NA	21	True	AATAAA	-25	NA	10697613	10711233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10697668_10704909_10705616_10706437_10706555_10710833
transcript_38836.known	chr17	+	575	4	FSM	ENSG00000263400.8	ENST00000579114.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.24933858267454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTATACCCAGGTGGTA	10729366	True	NA	NA	False	NA	NA	NA	10729803	10768030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10729901_10754228_10754363_10766678_10766857_10767864
transcript_3884.known	chr1	-	2815	4	FSM	ENSG00000142961.16	ENST00000319928.9	2738	4	-73	-4	-73	4	multi-exon	FALSE	canonical	3	12	junction_3	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGGAAGCGGTGATCT	-46616867	False	NA	NA	False	AATAAA	-20	NA	46616884	46607714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46609685_46610001_46610205_46612903_46613372_46616710
transcript_38841.known	chr17	+	562	3	FSM	ENSG00000263400.8	ENST00000581366.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGACACGAGCAACTAAT	10729339	True	NA	NA	False	NA	NA	NA	10729776	10767006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10729877_10754228_10754363_10766678
transcript_38842.known	chr17	+	1138	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	8	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	10704885	False	NA	18	True	AATAAA	-22	NA	10704899	10711230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10705528_10706437_10706551_10710833
transcript_38843.known	chr17	-	2261	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	35.0780874937934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTATCTTATTTGTTT	-11996654	True	NA	-14	True	AATAAA	-13	NA	11997457	11977451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_38845.known	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	33.6633661748528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-11996672	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_38848.nnic	chr17	+	792	2	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGTTCT	NA	False	NA	16	True	AATAAA	-18	NA	11971948	11976905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_11972336_11976500
transcript_3885.known	chr1	-	588	4	FSM	ENSG00000079277.22	ENST00000525888.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	59.1739432145227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGCTTCCATTTTAAA	-46602462	True	NA	NA	False	NA	NA	NA	46604246	46584546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46584804_46585873_46585975_46594112_46594281_46604184
transcript_38858.known	chr17	-	2529	4	FSM	ENSG00000236088.11	ENST00000664612.1	2529	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.4527905462721	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAGTTGAATCATTTAA	-14068054	True	NA	NA	False	NA	NA	NA	14069475	14028765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_14030572_14033551_14033662_14034007_14034417_14069271
transcript_3886.nic	chr1	-	1457	8	ISM	ENSG00000123472.12	ENST00000532925.5	998	9	490	-667	7	0	3prime_fragment	FALSE	canonical	3	627	junction_4	67.8305210936547	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGTTTGCATGATTT	-46665338	False	NA	-2	True	AATAAA	-23	NA	46665365	46635040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255
transcript_38861.nnic	chr17	+	1608	8	NNC	ENSG00000006695.12	novel	2898	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	94.3186089804128	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	14064993	True	NA	11	True	AATAAA	-15	NA	14069494	14208677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809_14207255_14208553
transcript_38862.known	chr17	+	2898	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	34.9638702408961	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	14065002	True	NA	11	True	AATAAA	-15	NA	14069503	14208677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_38864.nnic	chr17	+	1072	6	NNC	ENSG00000006695.12	novel	2898	7	NA	NA	-1	-25227	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	105.711683365653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	14064993	True	NA	NA	False	AATAAA	-21	NA	14069494	14182286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14182020
transcript_38865.known	chr17	+	875	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	8.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCTTTAGTGTTT	14064994	True	NA	NA	False	ATTAAA	-22	NA	14069495	14077322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_14069649_14074322_14074457_14076734
transcript_38866.known	chr17	-	459	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTTTGTT	-14705493	False	NA	NA	False	AAGAAA	-4	NA	14705534	14705075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_14705100_14705500
transcript_38867.known	chr17	-	1740	9	FSM	ENSG00000125409.13	ENST00000395930.6	1740	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.10653744329409	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTCTCGGAAAGCCT	-15341527	True	NA	-1	True	ATTAAA	-27	NA	15341597	15303811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15304153_15308663_15308819_15312258_15312482_15314086_15314231_15319076_15319148_15327991_15328076_15331006_15331615_15340027_15340062_15341517
transcript_38868.known	chr17	-	2423	5	FSM	ENSG00000109099.16	ENST00000674673.1	2423	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.03112887414927	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGAGTTTTTGTGGGA	NA	False	NA	5	True	AATAAA	-22	NA	15263190	15229772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260762_15262428
transcript_38871.nnic	chr17	-	2991	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	99.1101222203394	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562295	True	NA	-11	True	AATAAA	-15	NA	15563590	15436020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15438201_15440207_15440286_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_38873.known	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.2213327816037	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562266	True	NA	-11	True	AATAAA	-15	NA	15563561	15436020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_38874.known	chr17	-	520	7	FSM	ENSG00000259024.6	ENST00000518506.4	520	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	109.031213675514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCACCTATACCTCT	-15562153	True	NA	NA	False	AAAACA	-15	NA	15563448	15438140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553764_15553830_15555281_15555365_15563436
transcript_38877.known	chr17	-	556	6	FSM	ENSG00000259024.6	ENST00000481756.7	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.8858624869677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCGAGGAAAGACCCTG	-15562177	True	NA	NA	False	NA	NA	NA	15563472	15438063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_3888.known	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	94.1985137887005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	-46668096	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_3889.known	chr1	+	2256	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1.92847303959967	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	47023596	True	NA	4	True	AATAAA	-19	NA	47023668	47050751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
transcript_38896.known	chr17	+	607	6	FSM	ENSG00000187607.16	ENST00000585194.5	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	57.9434206791418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTTTCAGACATGG	15693762	True	NA	NA	False	NA	NA	NA	15699744	15716044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_38898.known	chr17	+	5443	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	42.4358339142758	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	15693756	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_3890.known	chr1	+	661	2	FSM	ENSG00000224805.2	ENST00000429328.2	661	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTATGACGGCAGTA	NA	False	NA	NA	False	AATAAA	-25	NA	47179249	47180339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_47179439_47179867
transcript_38902.nic	chr17	+	852	5	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	-20	12363	0	0	5prime_fragment	FALSE	canonical	3	78	junction_1	43.222534631833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	15693736	True	NA	10	True	AATAAA	-22	NA	15699718	15708424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
transcript_38907.known	chr17	+	1522	2	FSM	ENSG00000170425.4	ENST00000304222.3	1522	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGCCAGGAAGGTG	15945052	True	NA	NA	False	AATAAA	-23	NA	15945129	15975746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15945584_15974678
transcript_38912.known	chr17	-	1264	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	246.720200111092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994776	True	NA	0	True	GATAAA	-32	NA	15999650	15976559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_38915.known	chr17	-	721	8	FSM	ENSG00000214941.8	ENST00000497719.5	721	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	258.60323403442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAAAATAGATGACAGA	-15994839	True	NA	NA	False	NA	NA	NA	15999713	15977011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_3892.known	chr1	+	2937	6	FSM	ENSG00000162368.14	ENST00000371873.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_5	31.9274176844918	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTTTAGATTTCTG	47328781	True	NA	29	True	AATAAA	-23	NA	47333789	47378839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47374908_47374986_47375196_47375294_47376703
transcript_38923.nic	chr17	-	829	7	NIC	ENSG00000214941.8	novel	987	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	221.304779784702	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-15994833	True	NA	-3	True	AATAAA	-25	NA	15999707	15977729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_38924.nic	chr17	-	829	7	NIC	ENSG00000214941.8	novel	987	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	205.314122477946	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-15994846	True	NA	-3	True	AATAAA	-25	NA	15999720	15977729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999518
transcript_38925.nic	chr17	-	688	7	NIC	ENSG00000214941.8	novel	558	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	235.710274136138	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-15994846	True	NA	-3	True	AATAAA	-25	NA	15999720	15977729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999659
transcript_38928.known	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	251.893151951378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994714	True	NA	0	True	GATAAA	-32	NA	15999588	15976559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_38931.known	chr17	-	918	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	237.408845665026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	-15994795	True	NA	-6	True	AATAAA	-22	NA	15999669	15977732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_38935.known	chr17	-	723	6	FSM	ENSG00000214941.8	ENST00000460315.5	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	195.502838854069	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994814	True	NA	0	True	AATAAA	-28	NA	15999688	15977726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_38936.known	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	173.724609655627	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994765	True	NA	0	True	AATAAA	-28	NA	15999639	15977726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_38937.known	chr17	-	703	6	FSM	ENSG00000214941.8	ENST00000472495.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	99.4263546550913	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994810	True	NA	0	True	AATAAA	-28	NA	15999684	15977726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
transcript_38938.known	chr17	-	558	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	207.269486418045	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-15994809	True	NA	-3	True	AATAAA	-25	NA	15999683	15977729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_38942.known	chr17	-	682	5	FSM	ENSG00000214941.8	ENST00000460252.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	218.064783951926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGGGCTGTGGAGG	-15994807	True	NA	NA	False	NA	NA	NA	15999681	15977890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_38943.known	chr17	-	879	5	FSM	ENSG00000214941.8	ENST00000491631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	193.040151263927	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994843	True	NA	0	True	AATAAA	-28	NA	15999717	15977726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_38944.known	chr17	-	2020	5	FSM	ENSG00000214941.8	ENST00000399277.6	2020	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_4	101.521857252515	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994830	True	NA	0	True	GATAAA	-32	NA	15999704	15976559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
transcript_38945.known	chr17	-	1869	5	FSM	ENSG00000214941.8	ENST00000399280.6	1869	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	231.448023322732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994820	True	NA	0	True	GATAAA	-32	NA	15999694	15976559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_38947.known	chr17	-	677	5	FSM	ENSG00000214941.8	ENST00000584519.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	230.323685277915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGGGTGCAGTG	-15994762	True	NA	44	True	NA	NA	NA	15999636	15977682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15999518
transcript_3895.known	chr1	-	881	8	ISM	ENSG00000186094.18	ENST00000371839.6	2989	14	1360710	1319	382470	-1319	3prime_fragment	FALSE	canonical	0	0	junction_1	1.74963553055941	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACGGAGTCCTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	48663244	48534172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_48534294_48534889_48534917_48539641_48539739_48587003_48587167_48590832_48590986_48634492_48634605_48653336_48653452_48663151
transcript_38963.known	chr17	+	3050	10	FSM	ENSG00000011295.16	ENST00000261647.10	3050	10	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	73.8839597353366	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTCACTGGAGTTTTC	15995913	True	NA	1	True	ATTAAA	-15	NA	15999823	16029404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_38968.known	chr17	+	1289	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	13.29995822884	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214730	True	NA	NA	False	NA	NA	NA	16217209	16326411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_38971.nic	chr17	+	2213	6	NIC	ENSG00000108474.17	novel	1289	7	NA	NA	0	-157	intron_retention	FALSE	canonical	3	46	junction_2	14.1985914794391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGATGTGACTTTTA	16214711	True	NA	8	True	CATAAA	-26	NA	16217190	16326254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16317909_16325799
transcript_38972.known	chr17	+	1257	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214730	True	NA	NA	False	NA	NA	NA	16217209	16326411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
transcript_38975.known	chr17	+	888	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	16214766	True	NA	14	True	AATAAA	-25	NA	16217245	16218219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16217547
transcript_3898.known	chr1	-	1693	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	13.7025545063685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCTTTATCCTCATTT	-48776874	False	NA	NA	False	AATAAA	-23	NA	48776891	48727518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
transcript_38980.known	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1355	junction_3	208.367913796726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-16339524	True	NA	-22	True	AATAAA	-17	NA	16353469	16342536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
transcript_38981.known	chr17	-	1770	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	603.018449137338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-16339511	True	NA	-19	True	AATAAA	-20	NA	16353456	16342533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
transcript_38983.known	chr17	-	554	2	FSM	ENSG00000166582.11	ENST00000472570.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1797	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-16344731	False	NA	-19	True	AATAAA	-20	NA	16344742	16342533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_16342942_16344596
transcript_38988.known	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6034	junction_1	0	7588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283729	True	NA	19	True	AATAAA	-18	NA	16381090	16382740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381185_16381901
transcript_38989.known	chr17	+	1014	2	FSM	ENSG00000170315.14	ENST00000395837.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16377731	True	NA	19	True	AATAAA	-18	NA	16381340	16382740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381516_16381901
transcript_38990.known	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283928	False	NA	19	True	AATAAA	-18	NA	16381289	16382740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381463_16381901
transcript_38991.known	chr17	+	2779	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_7	5.08749968660682	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	16415532	True	NA	15	True	AATATA	-17	NA	16415570	16437003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
transcript_38994.known	chr17	+	1061	6	FSM	ENSG00000175061.19	ENST00000662869.1	1061	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1364.53977589516	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439531_16439704_16440184_16440254_16441073_16441131_16441367
transcript_38997.known	chr17	+	1023	6	FSM	ENSG00000175061.19	ENST00000671170.1	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	1309.35455855166	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441356
transcript_38998.known	chr17	+	1056	6	FSM	ENSG00000175061.19	ENST00000667979.2	1066	6	0	10	0	0	multi-exon	FALSE	canonical	3	261	junction_2	1289.53935961645	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369173	True	NA	-27	True	AATAAA	-20	NA	16438992	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_38999.known	chr17	+	993	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	0	4	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1300.5817160025	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369167	True	NA	-17	True	AATAAA	-30	NA	16438986	16442028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39.known	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00099_+_0_1300
transcript_3900.known	chr1	-	1465	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	20.8844439715306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTCGTGTTTTCCTT	-48776915	False	NA	NA	False	AATAAA	-16	NA	48776932	48727869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
transcript_39000.known	chr17	+	1043	6	FSM	ENSG00000175061.19	ENST00000487066.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1495.64533228971	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	NA	False	NA	-27	True	AATAAA	-20	NA	16438974	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439030_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39004.known	chr17	+	879	5	FSM	ENSG00000175061.19	ENST00000582911.6	885	5	0	6	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1404.50745370041	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATTCTTGAAAATGTG	16369200	True	NA	-33	True	AATAAA	-14	NA	16439019	16442012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439394_16440184_16440254_16441073_16441131_16441367
transcript_39005.known	chr17	+	1300	5	FSM	ENSG00000175061.19	ENST00000653954.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1139.97442405521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTGAAAATGTGTATT	16369217	True	NA	-29	True	AATAAA	-18	NA	16439036	16442016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073
transcript_39006.known	chr17	+	1035	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_4	725.442063503351	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369190	True	NA	-27	True	AATAAA	-20	NA	16439009	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
transcript_39010.known	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	261	junction_2	794.402448384948	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	16369217	True	NA	-22	True	AATAAA	-25	NA	16439036	16442023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
transcript_39014.known	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	803.507739539577	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
transcript_39015.known	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1400.42535948904	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
transcript_39017.known	chr17	+	1217	5	FSM	ENSG00000175061.19	ENST00000475947.7	1217	5	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	469.010327711448	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCAGATATTCGCTCT	NA	False	NA	31	True	AGTAAA	-26	NA	16438766	16442076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_39019.known	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_2	1022.74908335329	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
transcript_3902.known	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	297	junction_9	28.2427746687122	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	-50956688	True	NA	-3	True	AATAAA	-17	NA	50960267	50437027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
transcript_39020.known	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1388.21414054172	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369181	True	NA	-17	True	AATAAA	-30	NA	16439000	16442028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_39023.known	chr17	+	1159	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	486.548615819175	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369184	True	NA	-27	True	AATAAA	-20	NA	16439003	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
transcript_39026.known	chr17	+	897	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	1066.95860588247	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	NA	False	NA	-17	True	AATAAA	-30	NA	16438981	16442028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
transcript_39027.known	chr17	+	1685	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	540.219914067924	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369191	True	NA	-27	True	AATAAA	-20	NA	16439010	16442018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
transcript_39028.known	chr17	+	793	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	1	7	0	-5	multi-exon	FALSE	canonical	2	10	junction_1	1617.07190797304	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	16369218	True	NA	-34	True	AATAAA	-13	NA	16439037	16442011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
transcript_3903.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_17	6.25025951018329	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-51344985	True	NA	29	True	NA	NA	NA	51345116	51287257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
transcript_39030.known	chr17	+	1470	3	FSM	ENSG00000175061.19	ENST00000654561.1	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	593.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGTCTTGCTGTATT	16369217	True	NA	NA	False	NA	NA	NA	16439036	16441592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16440254_16441073
transcript_39034.known	chr17	+	1201	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	8	0	7	0	multi-exon	FALSE	canonical	3	222	junction_1	1448.64443101128	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369225	True	NA	-17	True	AATAAA	-30	NA	16439044	16442028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39035.known	chr17	+	1057	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	22	29	3	-3	multi-exon	FALSE	canonical	3	455	junction_2	1263.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	16369239	True	NA	-46	True	AATAAA	-1	NA	16439058	16441999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16440184_16440254_16441367
transcript_39036.known	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	218.572642386919	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
transcript_39037.known	chr17	+	1930	3	FSM	ENSG00000175061.19	ENST00000659884.1	1930	3	0	0	0	0	multi-exon	FALSE	canonical	3	3396	junction_2	43.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGGTGTCAATTCT	16369196	True	NA	-43	True	AATAAA	-4	NA	16439015	16442002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16440254_16441073_16441131_16441367
transcript_39038.known	chr17	+	564	3	FSM	ENSG00000175061.19	ENST00000584141.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	250.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAAAACTCGCTTCA	16369217	True	NA	NA	False	AATAAA	-8	NA	16439036	16441190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16440184_16440254_16441073
transcript_39039.known	chr17	+	1371	2	FSM	ENSG00000175061.19	ENST00000654356.1	1371	2	0	0	0	0	multi-exon	FALSE	canonical	3	3483	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAAATCACCCAAAATA	16369218	True	NA	-63	True	AAAAAG	-9	NA	16439037	16441228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16440254_16441073
transcript_3904.known	chr1	-	5163	25	FSM	ENSG00000085832.17	ENST00000371733.8	5163	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_14	16.6582791394816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-51514851	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_39041.known	chr17	-	7639	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	9.92773891679269	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATATGTACAAATGCGTG	-16568530	True	NA	NA	False	ATTAAA	-23	NA	16569204	16546953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
transcript_39046.nic	chr17	-	930	2	ISM	ENSG00000240505.9	ENST00000261652.7	1391	5	31580	0	524	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGTTGGGTCTTTGA	-16940518	False	NA	-13	True	AATAAA	-28	NA	16940538	16939080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_16939798_16940325
transcript_39047.known	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	3.60272006083385	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	-17233793	True	NA	-9	True	AATAAA	-14	NA	17237139	17221170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_39054.known	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	664	junction_11	72.2685533385918	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-17272636	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_39055.nic	chr17	-	1641	12	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	219.172448048269	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17272663	True	NA	-31	True	ATTAAA	-19	NA	17281273	17246834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_39058.known	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	293.756012774756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	-17272581	True	NA	-33	True	ATTAAA	-17	NA	17281191	17246836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_3906.known	chr1	-	1773	9	FSM	ENSG00000085832.17	ENST00000371727.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	40.9939019855393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-51514830	True	NA	NA	False	NA	NA	NA	51519245	51457535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51458734_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_39063.nic	chr17	-	1525	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	228.148285112994	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17272696	True	NA	-31	True	ATTAAA	-19	NA	17281306	17246834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17281131
transcript_3907.known	chr1	+	3660	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	186.927702531045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	51614191	True	NA	12	True	CATAAA	-44	NA	51617091	51789219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39070.nic	chr17	-	1482	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	228.225787324746	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17272697	True	NA	-31	True	ATTAAA	-19	NA	17281307	17246834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_39081.known	chr17	+	1581	5	FSM	ENSG00000205309.14	ENST00000389022.9	1581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.9602092806665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17302622	True	NA	9	True	AATAAA	-24	NA	17303372	17347663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344909_17346804
transcript_39082.known	chr17	+	1408	6	FSM	ENSG00000205309.14	ENST00000483704.5	1408	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	42.3698005659692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17303657	False	NA	9	True	AATAAA	-24	NA	17303677	17347663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344927_17346804
transcript_39083.known	chr17	-	636	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCTGGGGACTTGGA	-17383959	False	NA	NA	False	AAAAAG	-44	NA	17384012	17383376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17383400_17384000
transcript_39084.known	chr17	+	2209	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	17474178	True	NA	16	True	ATTAAA	-27	NA	17476999	17493221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_17477266_17491278
transcript_39089.known	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_6	31.0733898304571	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587583	True	NA	-7	True	AATAAA	-17	NA	17591708	17505562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_39090.nic	chr17	-	965	7	NIC	ENSG00000133027.18	novel	960	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	197.481152405883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587593	True	NA	-7	True	AATAAA	-17	NA	17591718	17505562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_39092.nic	chr17	-	905	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	201.91721075728	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587583	True	NA	-7	True	AATAAA	-17	NA	17591708	17505562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17576919_17577028_17591530
transcript_39096.known	chr17	-	708	5	FSM	ENSG00000133027.18	ENST00000580147.5	708	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.191490510944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATAAAGGCACCCTGA	-17587558	True	NA	-33	True	NA	NA	NA	17591683	17505588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17576919_17577028_17591530
transcript_39097.known	chr17	-	383	2	FSM	ENSG00000133027.18	ENST00000582268.5	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17506303	False	NA	-7	True	AATAAA	-17	NA	17506323	17505562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17505849_17506226
transcript_39098.known	chr17	-	1050	8	FSM	ENSG00000133027.18	ENST00000395781.6	1050	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	249.277486560906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGCTCCAGCCTCTG	-17587583	True	NA	-9	True	AATAAA	-15	NA	17591708	17505564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17505849_17506226_17506302_17507168_17507200_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_39099.known	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.76166666071399	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-17971858	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_39106.known	chr17	-	1553	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.3884443616814	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTAAGCTGGTTGT	-18035247	True	NA	-9	True	NA	NA	NA	18039168	18018020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_39112.nic	chr17	-	1130	6	NIC	ENSG00000171953.16	novel	1553	8	NA	NA	-8	0	intron_retention	FALSE	canonical	1	2	junction_1	95.581169693617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTGAGCCCTGTTTT	-18035296	True	NA	-21	True	ATTAAA	-18	NA	18039217	18018263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18018687_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_39118.known	chr17	+	1897	13	FSM	ENSG00000108591.10	ENST00000395726.8	1897	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	67.6011074038157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAACGGTTCCTGTTCA	18084009	True	NA	-1	True	AATAAA	-4	NA	18087924	18107959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106471_18107153
transcript_3912.known	chr1	+	3352	26	FSM	ENSG00000117859.19	ENST00000371714.5	3352	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	240.670416960623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51577178	51788469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51577257_51598123_51598194_51614304_51614420_51616873_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39120.known	chr17	+	1838	13	FSM	ENSG00000108591.10	ENST00000580055.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	68.1399703225321	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCCTGGCTCTCCTTTC	18084050	True	NA	-33	True	NA	NA	NA	18087965	18107927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101494_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_39135.known	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	89.6178553637611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	18084091	True	NA	NA	False	NA	NA	NA	18088006	18107600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_39136.known	chr17	+	577	4	FSM	ENSG00000108591.10	ENST00000578767.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	111.977180214939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCAAACTAGCCTTGT	18084046	True	NA	NA	False	NA	NA	NA	18087961	18099221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016
transcript_39138.known	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	TRUE	canonical	3	396	junction_19	144.883084604513	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-18244433	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_39140.nic	chr17	-	1709	10	ISM	ENSG00000177731.16	ENST00000545457.6	3975	29	11282	-5	-5	0	3prime_fragment	FALSE	canonical	3	824	junction_9	111.868970973486	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	-18247427	False	NA	NA	False	ATTAAA	-25	NA	18247441	18244835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168
transcript_39146.known	chr17	+	3236	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	5.79271573232759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATCTCAGTCTGTTTG	18259390	True	NA	NA	False	AATAAA	-31	NA	18260661	18266552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
transcript_39147.known	chr17	+	2441	4	FSM	ENSG00000177427.13	ENST00000395706.2	2441	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5629881700422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGCTGGATAAGGGAGT	18261097	False	NA	18	True	AATAAA	-27	NA	18261109	18265781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18261162_18262713_18262868_18263085_18263249_18263709
transcript_39148.nnic	chr17	-	1384	12	NNC	ENSG00000177302.15	novel	6596	19	NA	NA	0	-338	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.7168265760376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGTGTTGTCTGTCTT	-18309591	True	NA	-4	True	NA	NA	NA	18314994	18271765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_18271817_18292808_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
transcript_39149.known	chr17	-	727	4	FSM	ENSG00000177302.15	ENST00000583328.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.1233464566864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTTAA	-18314755	False	NA	NA	False	NA	NA	NA	18314774	18306549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18306967_18308350_18308425_18308881_18308942_18314598
transcript_39151.nic	chr17	-	2043	13	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	139.046155406517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTCATAATCATTTAG	-18357286	True	NA	-2	True	AATAAA	-14	NA	18363524	18328469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18360413_18360553_18363371
transcript_39155.known	chr17	-	2527	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	69.910095748778	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357312	True	NA	-8	True	AATAAA	-19	NA	18363550	18327872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39162.known	chr17	-	1759	11	FSM	ENSG00000176974.21	ENST00000580002.5	1759	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	122.432389505392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTCATAATCATTTAG	-18357257	True	NA	-2	True	AATAAA	-14	NA	18363495	18328469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18353671_18353818_18355885_18356001_18363371
transcript_39163.known	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	86.234621817458	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-18357213	True	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39175.nnic	chr17	-	2298	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	101.810766124047	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357323	True	NA	-8	True	AATAAA	-19	NA	18363561	18327872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39176.nnic	chr17	-	1701	10	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	101.810766124047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTCATAATCATTTAG	-18357323	True	NA	-2	True	AATAAA	-14	NA	18363561	18328469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39178.nnic	chr17	-	1571	10	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	101.810766124047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-18357251	True	NA	-9	True	ATTAAA	-12	NA	18363489	18328527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39191.known	chr17	+	1418	8	FSM	ENSG00000214856.11	ENST00000399124.6	1418	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.12485826771597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGAACTGAGCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	18439984	18442734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18440518_18440953_18441037_18441173_18441331_18441444_18441606_18441694_18441821_18442122_18442344_18442437_18442485_18442644
transcript_39194.nnic	chr17	+	1023	7	NNC	ENSG00000108448.23	novel	576	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5.87839736284947	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	18697584	True	NA	9	True	AATAAA	-16	NA	18697997	18736112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18735764
transcript_39195.known	chr17	+	815	5	FSM	ENSG00000108448.23	ENST00000449697.8	836	5	21	0	18	0	multi-exon	FALSE	canonical	0	0	junction_4	6.96419413859206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTAATCTATTTCCT	18697614	True	NA	NA	False	AATAAA	-23	NA	18698027	18704547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704128
transcript_39199.known	chr17	+	1049	7	FSM	ENSG00000171928.14	ENST00000574294.5	1049	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	142.214235886879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGCATTTTGATCCA	NA	False	NA	NA	False	AATGAA	-26	NA	18781110	18805895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352_18789436_18790895_18790961_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_392.known	chr1	-	485	4	FSM	ENSG00000127054.22	ENST00000534345.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	229.341569619543	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCCAGGTCAGGTTCC	-1318748	True	NA	NA	False	NA	NA	NA	1324671	1319305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319525_1320455_1320530_1320995_1321097_1324580
transcript_3920.nic	chr1	+	2710	21	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	-14	-66	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	118.408730674727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGTTTAATTAATTATT	51721670	True	NA	14	True	ATTAAA	-18	NA	51729793	51788398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39201.known	chr17	+	1876	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	49.2375195692607	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18778981	True	NA	NA	False	TATAAA	-21	NA	18781182	18806714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_39205.known	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	110.38832969718	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18779112	True	NA	NA	False	TATAAA	-21	NA	18781313	18806714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_39207.known	chr17	+	718	6	FSM	ENSG00000171928.14	ENST00000571018.5	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	142.060550470565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTTTGTTTTTCCAC	NA	False	NA	NA	False	NA	NA	NA	18781142	18805661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352_18789436_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_3921.nic	chr1	+	2781	21	NIC	ENSG00000117859.19	novel	2721	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	118.408730674727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721670	True	NA	20	True	CATAAA	-29	NA	51729793	51788469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39210.known	chr17	+	336	2	FSM	ENSG00000171928.14	ENST00000582288.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTAATTCTGTGCTAT	18779085	True	NA	NA	False	TTTAAA	-30	NA	18781286	18789669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352
transcript_39227.known	chr17	+	1958	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	70.6441437156847	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	18852097	True	NA	35	True	AATAAA	-36	NA	18858130	18931287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_3923.known	chr1	+	2210	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_5	98.2993387566773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAGATGCAAAGTTTA	51721684	True	NA	-99	True	NA	NA	NA	51729807	51787789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39234.nnic	chr17	+	1770	11	NIC	ENSG00000141127.15	novel	1905	11	NA	NA	-10	-53	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	101.747186693294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	18855804	True	NA	31	True	AATAAA	-28	NA	18856318	18931215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_18856430_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39236.known	chr17	+	1835	11	FSM	ENSG00000141127.15	ENST00000492129.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	138.854204113523	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18855835	True	NA	16	True	AATAAA	-17	NA	18856349	18931268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18856430_18865468_18865565_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39243.nic	chr17	+	1825	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	0	-53	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	18852062	True	NA	31	True	AATAAA	-28	NA	18858095	18931215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39244.nic	chr17	+	1878	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18852062	True	NA	16	True	AATAAA	-17	NA	18858095	18931268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39252.known	chr17	+	1540	10	FSM	ENSG00000141127.15	ENST00000395656.6	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	123.031261710285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAATAAAATAA	18852103	True	NA	NA	False	NA	NA	NA	18858136	18931024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39259.nnic	chr17	+	1135	3	NNC	ENSG00000228157.4	novel	1176	2	NA	NA	-3531	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19089442	19094307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_19089641_19093212_19093307_19093464
transcript_3926.known	chr1	+	2721	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	125.149528293689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721691	True	NA	20	True	CATAAA	-29	NA	51729814	51788469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39261.nnic	chr17	-	1127	3	NNC	ENSG00000197665.7	novel	1173	2	NA	NA	-3526	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19162637	19157780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_19158621_19158778_19158873_19162444
transcript_39262.nnic	chr17	+	1129	3	NNC	ENSG00000281856.1	novel	1173	2	NA	NA	-3528	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19215614	19220473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_19215810_19219381_19219476_19219633
transcript_39264.known	chr17	+	3149	7	FSM	ENSG00000166484.20	ENST00000308406.9	3149	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	76.1985709985576	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGTGTAATTTTTGG	NA	False	NA	12	True	AATACA	-20	NA	19377720	19383543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19378102_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_39265.known	chr17	+	3059	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	47.1925723910966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19378213	True	NA	13	True	AATACA	-21	NA	19378252	19383544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_39266.known	chr17	-	923	7	FSM	ENSG00000108641.20	ENST00000461069.6	923	7	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	88.2798580273741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACCTTCTGTATATT	-19360860	True	NA	-6	True	AATAAA	-13	NA	19362614	19340920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19341327_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39267.nnic	chr17	-	929	7	NNC	ENSG00000108641.20	novel	913	7	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	89.7601742917698	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCCTGGGGCTGCCTT	-19361004	True	NA	-7	True	AATAAA	-18	NA	19362758	19343173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_19343442_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39268.known	chr17	-	733	7	FSM	ENSG00000108641.20	ENST00000395616.7	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	86.4299652255448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCTCAGGGCTTTGT	-19360979	True	NA	NA	False	NA	NA	NA	19362733	19343453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343551_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39269.nic	chr17	-	982	7	NIC	ENSG00000108641.20	novel	913	7	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	89.7601742917698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGGCCTGGGGCTGCCT	-19361004	True	NA	-8	True	AATAAA	-17	NA	19362758	19343174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_19343496_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39270.known	chr17	-	1031	7	FSM	ENSG00000108641.20	ENST00000261499.11	913	7	0	-118	0	0	multi-exon	FALSE	canonical	3	174	junction_1	28.5345794120436	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-19360969	True	NA	NA	False	NA	NA	NA	19362723	19343056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39274.known	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	11.4960862905599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-19360956	True	NA	NA	False	NA	NA	NA	19362710	19343056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39275.known	chr17	-	755	6	FSM	ENSG00000108641.20	ENST00000268841.10	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	97.3192683901806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATGAGTCAGACACCT	-19360915	True	NA	-14	True	ATTAAA	-23	NA	19362669	19346945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19347197_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39276.known	chr17	-	601	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	89.3657652571722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAGTATGAGTCAGAC	-19360788	False	NA	-18	True	ATTAAA	-19	NA	19362542	19346949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39278.known	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	22.1503950303375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-19386707	True	NA	1	True	AATAAA	-20	NA	19387190	19383441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
transcript_39279.known	chr17	-	1820	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	8.01498596380555	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTCAGGGGGAGTTG	-19386707	True	NA	-2	True	AATAAA	-17	NA	19387190	19383444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
transcript_39286.known	chr17	+	3183	11	FSM	ENSG00000072210.19	ENST00000581518.6	3183	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	156.867332481942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATGCCTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	19648135	19677130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19648266_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39287.known	chr17	+	1708	11	FSM	ENSG00000072210.19	ENST00000672357.1	1708	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	151.924619466366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATATGCAAAC	19648684	False	NA	-76	True	AATGAA	-28	NA	19648722	19675664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19648844_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39289.known	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	195.273654136957	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19640089	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
transcript_39295.known	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	81.0442646922419	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19640089	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39296.known	chr17	+	2060	10	FSM	ENSG00000072210.19	ENST00000671878.1	2060	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	162.663554918628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19640119	True	NA	NA	False	NA	NA	NA	19648780	19685700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19685274
transcript_393.known	chr1	-	549	4	FSM	ENSG00000127054.22	ENST00000531019.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	232.925357619608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	-1318737	True	NA	NA	False	NA	NA	NA	1324660	1319380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319525_1320455_1320683_1320995_1321094_1324580
transcript_3930.known	chr1	+	2755	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	104.851563724689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721780	False	NA	20	True	CATAAA	-29	NA	51729903	51788469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_39301.known	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	172.528937790157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	19640144	False	NA	2	True	AATAAA	-13	NA	19648805	19675742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
transcript_39302.known	chr17	+	1524	9	FSM	ENSG00000072210.19	ENST00000672567.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	174.901356126818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19649063	False	NA	NA	False	NA	NA	NA	19649080	19685700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19685274
transcript_39304.known	chr17	+	3276	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	183.917572486665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	19640124	True	NA	-40	True	NA	NA	NA	19648785	19677531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39306.known	chr17	+	3822	9	FSM	ENSG00000072210.19	ENST00000631291.2	3822	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	159.282718381499	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGATGGTATTTGTCA	19648487	False	NA	19	True	TATAAA	-16	NA	19648525	19677590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19671720_19671957_19675557
transcript_39312.known	chr17	-	3908	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_1	7.93180813225544	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	-19867672	True	NA	-1	True	AATAAA	-22	NA	19867936	19770829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_39313.known	chr17	-	681	1	FSM	ENSG00000270091.1	ENST00000602353.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGCCTATTTCATCAAC	NA	False	NA	-1	True	AATAAA	-17	NA	19897270	19896589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19896600_19897300
transcript_39314.known	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	12.969351627304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-19974272	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_39317.known	chr17	-	1815	14	FSM	ENSG00000108599.15	ENST00000395536.7	1815	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	38.0445083472584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAACTTGAGATAAAGG	-19977667	False	NA	NA	False	NA	NA	NA	19977679	19906226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_39323.known	chr17	+	2251	12	FSM	ENSG00000128487.19	ENST00000581399.6	2251	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	33.2185351028634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCCAGGGCAACC	20149706	True	NA	-14	True	AAAACA	-19	NA	20155993	20314729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_39326.known	chr17	+	2536	6	FSM	ENSG00000128487.19	ENST00000395525.7	2536	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	85.1694781010193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	20149801	True	NA	NA	False	AATAAA	-23	NA	20156088	20237179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_39327.known	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	92.3752537208965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	20149770	True	NA	NA	False	NA	NA	NA	20156057	20239273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_39328.known	chr17	-	1184	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTTTTTTTTTAAAT	-20009175	True	NA	NA	False	AATAAA	-36	NA	20009234	20008050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_20008000_20009200
transcript_39330.nic	chr17	+	1821	5	NIC	ENSG00000233098.10	novel	1488	4	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	47.8297762905076	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862663	True	NA	NA	False	AATAAA	-29	NA	20868416	20930046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358_20924834_20929430
transcript_39335.known	chr17	+	3727	4	FSM	ENSG00000233098.10	ENST00000577537.5	3727	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.6789449880446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	20862679	True	NA	NA	False	AATAAA	-20	NA	20868432	20905230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20902217
transcript_39338.nic	chr17	+	1554	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	-61	-5	-7	0	multi-exon	FALSE	canonical	3	78	junction_2	37.9502598439355	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862672	True	NA	NA	False	AATAAA	-29	NA	20868425	20930046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
transcript_39342.nnic	chr17	+	1272	4	NNC	ENSG00000233098.10	novel	1488	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	61.6999909958574	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862813	True	NA	NA	False	AATAAA	-29	NA	20868566	20930046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_20868686_20892370_20892433_20924358_20924834_20929430
transcript_39344.known	chr17	+	3382	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	24.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	20862766	True	NA	NA	False	AATAAA	-20	NA	20868519	20905230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20892229_20892433_20902217
transcript_39346.known	chr17	+	1257	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	36	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	56.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862766	True	NA	NA	False	AATAAA	-29	NA	20868519	20930046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20924358_20924834_20929430
transcript_39347.nnic	chr17	+	1377	3	NNC	ENSG00000233098.10	novel	3382	3	NA	NA	20	-1817	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	50.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTTAATTTATGT	20862813	True	NA	12	True	ATTAAA	-14	NA	20868566	20903413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_20868686_20892370_20892433_20902217
transcript_39350.known	chr17	+	1910	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21125251	True	NA	NA	False	NA	NA	NA	21126963	21128873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_21127000_21128900
transcript_39351.known	chr17	-	827	4	FSM	ENSG00000178307.10	ENST00000583929.1	827	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	73.2317478207976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGATCTCCTGGCAGTT	-21204768	True	NA	NA	False	NA	NA	NA	21214176	21198539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21208391_21208540_21210935_21211228_21214090
transcript_39352.known	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	-21204753	True	NA	-9	True	ATTAAA	-13	NA	21214161	21197957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21210935_21211228_21214090
transcript_39353.known	chr17	-	819	3	FSM	ENSG00000178307.10	ENST00000583264.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	58.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGAGGCAGCAGA	-21204755	True	NA	NA	False	NA	NA	NA	21214163	21198255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21211066_21211228_21214090
transcript_39354.known	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	-21204753	True	NA	-5	True	ATTAAA	-17	NA	21214161	21197953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21214090
transcript_39359.nnic	chr17	+	2283	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	172.707702831356	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	27281816	True	NA	NA	False	AATACA	-10	NA	27294072	27312887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39362.nnic	chr17	+	3027	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	172.707702831356	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	27281816	True	NA	38	True	ATTAAA	-20	NA	27294072	27313631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39366.known	chr17	+	4187	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_5	107.142136902341	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	27281836	True	NA	38	True	ATTAAA	-20	NA	27294092	27313631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39374.known	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	145.232518311155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	27281857	True	NA	9	True	AATAAA	-15	NA	27294113	27315926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39390.known	chr17	+	1611	7	FSM	ENSG00000109046.15	ENST00000348811.6	1611	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	252.174983339391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	27281874	True	NA	NA	False	AATACA	-10	NA	27294130	27312887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39392.nic	chr17	+	1498	6	ISM	ENSG00000109046.15	ENST00000467843.6	4187	9	-20	5424	-3	0	5prime_fragment	FALSE	canonical	3	319	junction_5	67.9276085255473	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAG	27281816	True	NA	NA	False	NA	NA	NA	27294072	27308207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743
transcript_39393.known	chr17	+	1900	5	FSM	ENSG00000109046.15	ENST00000581185.5	1900	5	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	20.5243757517738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACACAGGCGCACAATGG	27281857	True	NA	NA	False	NA	NA	NA	27294113	27307789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781
transcript_39397.known	chr17	+	544	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGTGTAGGGTAATAA	27281857	True	NA	NA	False	NA	NA	NA	27294113	27302009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787
transcript_394.known	chr1	-	896	4	FSM	ENSG00000127054.22	ENST00000493534.6	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	229.891278651453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAACCCACCAGGCTCT	-1318735	True	NA	NA	False	NA	NA	NA	1324658	1319059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319706_1320455_1320530_1320995_1321094_1324580
transcript_39402.nnic	chr17	-	1477	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	3119	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	10.6144555520604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27888857	False	345	2	True	AGTAAA	-18	NA	27889202	27878357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_27879491_27880273_27880367_27882568_27882713_27889095
transcript_39403.known	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	10.6144555520604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893020	True	NA	2	True	AGTAAA	-18	NA	27893365	27878357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
transcript_39410.nnic	chr17	+	2996	12	NNC	ENSG00000087095.13	novel	1702	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	5	junction_1	44.1172367506443	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCATCTGTTTTATT	28039361	True	NA	22	True	ATTAAA	-17	NA	28041713	28196381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_28041780_28043272_28043332_28122602_28122733_28132619_28132676_28161159_28161267_28163542_28163629_28168447_28168658_28172516_28172619_28185178_28185266_28191020_28191220_28192119_28192214_28194581
transcript_39412.known	chr17	-	852	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	67.2577133123035	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAATGGCTTGATGTA	-28333130	True	NA	-14	True	AATAAA	-7	NA	28335439	28328336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_39413.known	chr17	-	1071	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	46.2990280675523	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	-28333140	True	NA	-6	True	AATAAA	-15	NA	28335449	28328328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_39414.known	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	31.6889176211495	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-28333163	True	NA	-3	True	AATAAA	-18	NA	28335472	28328325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
transcript_39416.known	chr17	-	831	5	FSM	ENSG00000109083.14	ENST00000578985.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	45.8441653866662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAACTTGTTAATATCA	-28333131	True	NA	NA	False	AATAAA	-23	NA	28335440	28328998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_39421.nic	chr17	-	1769	4	NIC	ENSG00000109083.14	novel	1071	6	NA	NA	-456	0	intron_retention	FALSE	canonical	3	99	junction_3	33.1461410524161	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	28335945	28328328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28329277_28330442_28330529_28331858_28331988_28335339
transcript_39423.known	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	855	junction_2	5.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	28303163	True	NA	20	True	AATAAA	-17	NA	28319199	28328685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28319366_28325502_28325648_28326533
transcript_39425.known	chr17	+	1075	2	FSM	ENSG00000109084.14	ENST00000582384.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGTGTATCACCTGT	28303232	False	NA	NA	False	ACTAAA	-17	NA	28319268	28327511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28319366_28326533
transcript_39426.known	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	44.9706570999357	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-28340604	True	NA	-8	True	ATTAAA	-14	NA	28357527	28346632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
transcript_39428.known	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	9.46337971105226	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	28334560	True	NA	6	True	AATAAA	-17	NA	28335760	28347009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_39434.known	chr17	+	3082	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	9.54148835350125	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	28354786	True	NA	19	True	ATTAAA	-16	NA	28357646	28363683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
transcript_39438.nnic	chr17	+	947	6	NNC	ENSG00000244045.13	novel	3082	6	NA	NA	-1	610	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	85.7242089493977	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTATTTTAACTCCTG	28354785	True	NA	22	True	AATAAA	-19	NA	28357645	28362065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361674
transcript_39439.known	chr17	-	1626	8	FSM	ENSG00000109072.14	ENST00000226218.9	1626	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.728431359084683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATTATTGTTCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	28370307	28367283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28367482_28367714_28368060_28368520_28368674_28368871_28369029_28369288_28369429_28369506_28369852_28369926_28370047_28370139
transcript_39440.known	chr17	+	493	2	FSM	ENSG00000265254.1	ENST00000580714.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTCTGGTATATTCAA	NA	False	NA	29	True	AAAAAG	-11	NA	28405239	28406796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28405452_28406515
transcript_39441.known	chr17	+	585	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATGACTAAATAAAA	28466471	False	NA	NA	False	NA	NA	NA	28467821	28468406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28467800_28468400
transcript_39443.known	chr17	-	1379	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	38.8546972707291	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-28548011	True	NA	-6	True	AATAAA	-18	NA	28552624	28546707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
transcript_39444.known	chr17	-	1653	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	19.3045763140937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-28548018	True	NA	-6	True	AATAAA	-18	NA	28552631	28546707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
transcript_39446.known	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_11	30.4335069800941	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571513	False	3282	-5	True	AATAAA	-29	NA	28571524	28553386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
transcript_39447.known	chr17	-	2815	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	23.7573146630675	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571525	False	3282	-5	True	AATAAA	-29	NA	28571536	28553386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
transcript_39452.known	chr17	-	2397	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	103.707714274301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTACTCTTTCT	-28571517	False	3282	-1	True	AATAAA	-33	NA	28571528	28553382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
transcript_39454.known	chr17	-	1722	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	106.522819673116	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	-28576937	False	NA	-24	True	AATAAA	-19	NA	28576948	28573114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
transcript_39457.known	chr17	-	1608	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_8	41.3430768085782	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTACTTTGCCTGTCTGTT	-28573613	True	NA	-29	True	AATAAA	-14	NA	28576895	28573119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
transcript_39459.known	chr17	-	3786	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_17	72.075417338362	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-28590952	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
transcript_39463.known	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	18.7192414376224	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-28638857	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_39469.known	chr17	-	583	4	FSM	ENSG00000132581.10	ENST00000587338.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	9.17726659862414	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGACCTATCAGTGGGCA	-28661466	True	NA	NA	False	NA	NA	NA	28662189	28649126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28662045
transcript_3947.known	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	300.351238071258	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-51878751	False	NA	-3	True	AATAAA	-45	NA	51878805	51789190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
transcript_39470.known	chr17	-	1025	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	153	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-28661462	True	NA	-3	True	GATAAA	-20	NA	28662185	28648588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28655286_28655484_28662045
transcript_39471.known	chr17	-	681	3	FSM	ENSG00000132581.10	ENST00000588472.6	681	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGTACTGATAAAACA	-28661409	False	NA	NA	False	NA	NA	NA	28662132	28648740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649138_28655286_28655484_28662045
transcript_39474.known	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	-28657259	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28655286_28655484_28661725
transcript_39475.known	chr17	-	823	2	FSM	ENSG00000132581.10	ENST00000585749.5	823	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-28661457	True	NA	-3	True	GATAAA	-20	NA	28662180	28648588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28662045
transcript_39476.known	chr17	+	6404	37	FSM	ENSG00000109111.15	ENST00000314616.11	6404	37	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_1	46.5747772570434	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCCTCTGCCGTTCAT	28654481	True	NA	21	True	AGTAAA	-15	NA	28662204	28702679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_39483.nic	chr17	-	1646	4	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	22.0655588845805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28711219	False	NA	-3	True	AATAAA	-18	NA	28711235	28703196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28710870
transcript_39484.known	chr17	-	1566	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	20.0055547841649	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28711838	False	NA	-3	True	AATAAA	-18	NA	28711854	28703196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
transcript_39488.known	chr17	-	766	2	FSM	ENSG00000167525.15	ENST00000581289.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCACAAGCCAGGAAGG	-28711731	False	NA	NA	False	AAAAAG	-12	NA	28711747	28703624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28704213_28711569
transcript_39491.known	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	337.681210611429	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	-28717922	False	NA	NA	False	NA	NA	NA	28718161	28714624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_39492.nic	chr17	-	1342	11	NIC	ENSG00000109113.20	novel	1592	11	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	349.416313299766	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28718308	False	NA	-2	True	ATTAAA	-19	NA	28718547	28714283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718369
transcript_39494.known	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_10	334.06168592043	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28718176	False	3832	-2	True	ATTAAA	-19	NA	28718415	28714283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_39498.known	chr17	-	1184	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	416.329965291954	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-28717927	False	3832	-3	True	ATTAAA	-18	NA	28718166	28714284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_395.known	chr1	-	704	4	FSM	ENSG00000127054.22	ENST00000490853.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	228.948805534241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	-1318726	True	NA	NA	False	NA	NA	NA	1324649	1319380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319844_1320455_1320530_1320995_1321094_1324580
transcript_3950.known	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	202.456700446183	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-51860301	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_39500.nic	chr17	-	1549	11	NIC	ENSG00000109113.20	novel	1592	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_10	413.712085876156	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28718157	False	3832	-2	True	ATTAAA	-19	NA	28718396	28714283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_39502.known	chr17	-	1741	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_8	131.832478809798	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717857	False	NA	-2	True	ATTAAA	-19	NA	28717868	28714283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_39513.known	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	324.262734503449	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717737	False	3031	-2	True	ATTAAA	-19	NA	28717748	28714283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_39521.nic	chr17	-	1597	9	NIC	ENSG00000109113.20	novel	1741	10	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	368.595115777461	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717805	False	3832	-2	True	ATTAAA	-19	NA	28717816	28714283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28717212
transcript_39522.known	chr17	-	914	9	FSM	ENSG00000109113.20	ENST00000430132.6	914	9	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_8	393.496188037445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGCTGAGGAGACTGT	-28718166	False	3832	NA	False	NA	NA	NA	28718405	28714646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28718121
transcript_39537.known	chr17	+	3573	15	FSM	ENSG00000160602.14	ENST00000268766.11	3573	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	17.855428489135	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	28728584	True	NA	12	True	AATAAA	-14	NA	28728787	28743455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28728861_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
transcript_39544.known	chr17	+	580	6	FSM	ENSG00000198242.14	ENST00000394935.7	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7464.73355452155	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGCCTGTCTGTCA	28720237	False	NA	33	True	AATATA	-23	NA	28720263	28723933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720329_28720413_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_39547.known	chr17	+	636	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	6575.6783442851	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720048	False	NA	36	True	AATATA	-26	NA	28720078	28723936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_39548.known	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	6563.85756910523	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720217	False	NA	36	True	AATATA	-26	NA	28720243	28723936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_39554.known	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_2	17.2497987105808	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-28722401	True	NA	-1	True	AATGAA	-15	NA	28726233	28724347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
transcript_39555.known	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	133.369994959719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	-28726917	False	239	-106	True	NA	NA	NA	28726932	28724452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
transcript_39556.known	chr17	-	578	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	135.711294870971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTACTTTTCCCGCCTC	-28727696	True	NA	NA	False	NA	NA	NA	28727935	28724598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
transcript_39558.known	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	12081	junction_1	1995.56464440519	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	28532132	True	NA	29	True	AATAAA	-23	NA	28719984	28724359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_39559.known	chr17	+	639	4	FSM	ENSG00000198242.14	ENST00000472628.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	12918	junction_3	1686.96499337979	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720102	False	NA	36	True	AATATA	-26	NA	28720568	28723936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720891_28722722_28722900_28723570_28723641_28723866
transcript_39560.known	chr17	+	2894	7	FSM	ENSG00000076604.16	ENST00000262395.10	2894	7	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	19.5994614438481	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCCTTACTGTCTTG	28737480	True	NA	15	True	ATTAAA	-15	NA	28744010	28750956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28744256_28747212_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
transcript_39566.known	chr17	+	1841	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_9	44.8151209049847	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	28843644	True	NA	21	True	AATAAA	-22	NA	28855015	28861061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
transcript_39567.nic	chr17	+	1754	10	NIC	ENSG00000132591.12	novel	1841	10	NA	NA	-53	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_9	201.933860337035	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	28843585	True	NA	21	True	AATAAA	-22	NA	28854956	28861061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860576
transcript_3957.known	chr1	-	3819	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	255.872539883956	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTTGTTTGTATT	-51878883	True	NA	-8	True	AATAAA	-40	NA	51878937	51789195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792426_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_39588.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	146.348898185125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838633	True	NA	-17	True	AGTAAA	-15	NA	28842727	28755979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_39591.known	chr17	-	4050	4	FSM	ENSG00000173065.14	ENST00000577682.6	4050	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	30.2103734943259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759765_28766585_28766708_28834292_28834327_28842681
transcript_39593.known	chr17	-	4169	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	159.354949719173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838689	True	NA	-17	True	AGTAAA	-15	NA	28842783	28755979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
transcript_39594.known	chr17	-	4162	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	153.573724604468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
transcript_39595.known	chr17	-	4246	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28807351	True	NA	-17	True	AGTAAA	-15	NA	28812435	28755979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28812208
transcript_39596.known	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	164.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28842681
transcript_3960.nic	chr1	-	2738	11	ISM	ENSG00000078618.23	ENST00000352171.12	3594	31	-63	25978	15	741	5prime_fragment	FALSE	canonical	3	738	junction_9	65.9818914551561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAGGTAAGC	-51860364	True	NA	NA	False	ATTAAA	-14	NA	51878790	51815187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_39600.known	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	95.063347300629	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886394	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
transcript_39601.known	chr17	-	2585	11	FSM	ENSG00000132589.16	ENST00000585169.5	2585	11	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_9	411.833716443907	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGCATTGTGTCTTC	-28886313	True	NA	-9	True	AATAAA	-15	NA	28897652	28879340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28888944_28889027_28897525
transcript_39602.nic	chr17	-	2549	11	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_7	306.37018458068	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886344	True	NA	-7	True	AATAAA	-17	NA	28897683	28879338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883176_28883232_28884224_28884316_28888944_28889027_28897525
transcript_39603.nnic	chr17	-	2524	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_9	326.547635154033	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886332	True	NA	-7	True	AATAAA	-17	NA	28897671	28879338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28897525
transcript_39607.nnic	chr17	-	1704	4	NIC	ENSG00000167536.14	novel	1929	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	15	junction_3	103.654340103163	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-28900676	True	NA	-12	True	AATAAA	-15	NA	28902976	28897783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28898893_28900989_28901302_28901492_28901617_28902817
transcript_39609.known	chr17	+	2169	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	8.97388501402252	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	29043103	True	NA	19	True	AATAAA	-33	NA	29043140	29057216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_39612.known	chr17	-	10877	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	28.003967972811	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTTGTTATCTTTT	-29273061	True	NA	-2	True	AATAAA	-16	NA	29294148	29255838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
transcript_39615.known	chr17	-	341	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	29340822	29340481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29340500_29340800
transcript_39617.known	chr17	-	965	8	FSM	ENSG00000141298.19	ENST00000579040.5	965	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.22161910928488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTACATCTATATCAT	-29928905	True	NA	NA	False	AATAAA	-32	NA	29930173	29673900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29674160_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
transcript_39618.known	chr17	-	560	3	FSM	ENSG00000141298.19	ENST00000582084.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTTTTCTGTAGTGC	NA	False	NA	-15	True	AATAAA	-23	NA	29930276	29925216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29925556_29929937_29930041_29930158
transcript_39619.nic	chr17	-	2311	2	ISM	ENSG00000141298.19	ENST00000577483.1	1630	7	-125	116092	-4	1694	5prime_fragment	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGGAAGAAGAAGAAT	-29928964	True	NA	NA	False	ACTAAA	-14	NA	29930232	29791921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_29793938_29929937
transcript_39620.known	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTGATACCTATATT	-29928960	True	NA	-75	True	NA	NA	NA	29930228	29925276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29925556_29929937
transcript_39625.known	chr17	+	1242	8	FSM	ENSG00000126653.18	ENST00000475652.5	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	162.220686166741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGAACCGACCCAGTG	30109858	True	NA	5	True	AAGAAA	-17	NA	30116828	30185193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_39627.known	chr17	+	2506	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.9809832971462	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	30109845	True	NA	15	True	AATAAA	-22	NA	30116815	30186475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_39631.known	chr17	+	2420	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_1	153.09813846027	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	30109836	True	NA	14	True	AATAAA	-21	NA	30116806	30186474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_39638.nic	chr17	+	409	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-26	7331	9	0	5prime_fragment	FALSE	canonical	3	211	junction_1	97.8068888166882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	30109819	True	NA	NA	False	AAAAAG	-8	NA	30116789	30179144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_39641.known	chr17	+	2057	7	FSM	ENSG00000126653.18	ENST00000540900.7	2057	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.782573649317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTGAATTTATATATA	NA	False	NA	-52	True	NA	NA	NA	30115520	30185847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30115624_30116645_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_39644.known	chr17	+	482	3	FSM	ENSG00000126653.18	ENST00000584423.5	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	101.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAGTTATATATATAT	30109810	True	NA	NA	False	NA	NA	NA	30116780	30128163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30118079_30118174_30127858
transcript_39646.known	chr17	-	2307	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_8	37.7008669913681	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	-30287299	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
transcript_39651.nic	chr17	-	1823	10	NIC	ENSG00000108578.15	novel	2307	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	127.321116342367	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	-30287299	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286852_30291491_30291509_30291806
transcript_39657.known	chr17	+	5987	9	FSM	ENSG00000108587.16	ENST00000451249.7	5987	9	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	62.1691241694782	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	30468660	True	NA	NA	False	NA	NA	NA	30477407	30527592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_39658.known	chr17	+	6039	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	0	0	0	0	multi-exon	TRUE	canonical	3	243	junction_2	84.6329390662997	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	30468614	True	NA	NA	False	NA	NA	NA	30477361	30527592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_3966.nic	chr1	-	1477	3	ISM	ENSG00000078618.23	ENST00000354831.11	3895	33	15	47758	15	3043	5prime_fragment	FALSE	canonical	3	72	junction_1	380	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCCCAATCATTTTAA	-51860364	True	NA	NA	False	NA	NA	NA	51878790	51836948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_51837621_51840225_51840515_51878274
transcript_39660.known	chr17	+	1011	9	FSM	ENSG00000108587.16	ENST00000467337.6	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	144.100659262892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	30468675	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477487_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_39662.known	chr17	+	947	9	FSM	ENSG00000108587.16	ENST00000414833.2	947	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	151.658281590555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTTTCTAACACATT	30468694	True	NA	NA	False	NA	NA	NA	30477441	30522558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477487_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_39672.known	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	24.415955621046	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	30600156	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
transcript_39674.known	chr17	-	2873	8	FSM	ENSG00000176390.12	ENST00000324238.7	2873	8	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_2	28.7487355533833	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTACTTTTTTCTTC	-30818630	True	NA	-7	True	AATAAA	-17	NA	30824692	30782683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_39679.nic	chr17	-	1051	5	ISM	ENSG00000176390.12	ENST00000324238.7	2873	8	-43	10625	-43	-8202	5prime_fragment	FALSE	canonical	3	143	junction_2	17.1373130916139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATTACCTCATGTGAT	-30818673	True	NA	NA	False	NA	NA	NA	30824735	30793308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_39684.nic	chr17	+	1847	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-39	40928	-35	-34341	5prime_fragment	FALSE	canonical	3	84	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTAAAGAAGAAGAATAAGA	30828851	True	NA	NA	False	AATAAA	-3	NA	30831930	30835511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30832414_30834147
transcript_3969.known	chr1	-	1020	2	FSM	ENSG00000078618.23	ENST00000491410.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATATCTCTCAGAGG	-51860345	True	NA	NA	False	TATAAA	-41	NA	51878771	51839991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51840515_51878274
transcript_39691.known	chr17	-	1262	4	FSM	ENSG00000172171.11	ENST00000306049.9	1262	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.8760836282606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30899607_30900412_30900522_30904065_30904530_30906167
transcript_39694.known	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	4.54606056566195	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905506	True	NA	-3	True	AATAAA	-13	NA	30906238	30898985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
transcript_39695.nnic	chr17	-	1874	4	NNC	ENSG00000172171.11	novel	1306	4	NA	NA	-591	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	55.6496980125579	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30906775	True	NA	-3	True	AATAAA	-13	NA	30906829	30898985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_30899607_30900412_30900563_30904065_30904530_30906190
transcript_39700.known	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30900563_30904065_30904530_30906167
transcript_39704.known	chr17	-	559	2	FSM	ENSG00000172171.11	ENST00000541382.2	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATTTGAGAACCTACT	-30905503	True	NA	NA	False	NA	NA	NA	30906235	30904038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30904530_30906167
transcript_39712.nnic	chr17	-	671	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-40	45	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	7.1336448530109	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095208	True	NA	-8	True	AATAAA	-32	NA	31095490	31090741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31095226
transcript_39713.nnic	chr17	-	483	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-357	45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.1233464566864	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095784	False	NA	-8	True	AATAAA	-32	NA	31095807	31090741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31095731
transcript_39723.known	chr17	-	4330	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_7	26.4425769648726	640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTACTTTAGAACA	-31893878	True	NA	-30	True	ATTAAA	-13	NA	31901708	31860903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_3974.nnic	chr1	-	1759	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9684277300709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	-51985056	True	NA	-4	True	ATTAAA	-17	NA	51990763	51907955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_51908843_51919926_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_39743.known	chr17	+	393	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCCGAAGCTTTGT	32007979	False	NA	2	True	AATAAA	-14	NA	32008035	32017220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32008133_32016924
transcript_39744.known	chr17	+	431	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	13.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACACATGGACATAACTG	32082824	False	NA	NA	False	AAGAAA	-17	NA	32083178	32096989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32083323_32095061_32095202_32096842
transcript_39745.known	chr17	+	860	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTCATTTATTTAT	32127538	True	NA	NA	False	ATTAAA	-16	NA	32127594	32128454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32127600_32128500
transcript_39747.known	chr17	+	3165	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_18	55.4373195500285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139671	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
transcript_39749.known	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	54.0625209626735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	32139729	True	NA	23	True	AATAAA	-29	NA	32142559	32225666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_39755.known	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	256.136262805498	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	32329830	True	NA	6	True	AATAAA	-20	NA	32350156	32381885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_39761.known	chr17	+	2124	11	FSM	ENSG00000010244.19	ENST00000394673.6	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_8	182.635949363755	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTTTTTATTCATAAC	32329811	True	NA	18	True	AATAAA	-15	NA	32350137	32370343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32367771_32368015_32369294_32369455_32369598
transcript_39764.known	chr17	+	2283	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	387.420043363789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	32329805	True	NA	12	True	AATAAA	-22	NA	32350131	32370451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_39776.nic	chr17	-	1383	10	NIC	ENSG00000108666.10	novel	4547	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	201.987226096535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	-32340120	True	NA	-20	True	AATAAA	-14	NA	32342178	32331595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339925_32341203_32341285_32341999
transcript_39777.nic	chr17	-	1355	10	NIC	ENSG00000108666.10	novel	4547	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	198.972235795057	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	-32341911	False	NA	-20	True	AATAAA	-14	NA	32341937	32331595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341800
transcript_39779.known	chr17	-	4547	10	FSM	ENSG00000108666.10	ENST00000577809.6	4547	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	156.053409660496	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGTTTTTGTTTAAT	-32340115	True	NA	-1	True	AATAAA	-18	NA	32342173	32328440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
transcript_3978.known	chr1	-	12780	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	31.3079462756662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	-51984993	True	NA	-4	True	ATTAAA	-17	NA	51990700	51907955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_39785.nnic	chr17	-	1260	9	NNC	ENSG00000108666.10	novel	4581	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	160.797961352127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	-32340120	True	NA	-20	True	AATAAA	-14	NA	32342178	32331595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337962_32339812_32339939_32341203_32341285_32341999
transcript_39789.nic	chr17	-	1650	9	NIC	ENSG00000108666.10	novel	4581	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	405	junction_6	43.3207513785253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	-32340120	True	NA	-20	True	AATAAA	-14	NA	32342178	32331595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32338352_32339812_32339939_32341203_32341285_32341999
transcript_39800.known	chr17	+	1005	5	FSM	ENSG00000010244.19	ENST00000577324.1	1005	5	0	0	0	0	multi-exon	FALSE	canonical	3	1061	junction_3	54.283975536064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAATGAATATGAGGTGC	32329871	True	NA	NA	False	NA	NA	NA	32350197	32361333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891
transcript_39807.known	chr17	+	3850	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	0	0	0	0	multi-exon	FALSE	canonical	3	2004	junction_13	131.193068802339	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	32411336	True	NA	NA	False	AATAAA	-19	NA	32444509	32483319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
transcript_39808.known	chr17	+	3317	14	FSM	ENSG00000108671.11	ENST00000649012.1	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_13	566.567459699666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATATATTATTAAAA	32411287	True	NA	NA	False	NA	NA	NA	32444460	32483295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32481310
transcript_3981.nic	chr1	-	945	4	ISM	ENSG00000169213.7	ENST00000371655.4	12780	5	-63	25101	-63	-25101	5prime_fragment	FALSE	canonical	3	193	junction_3	16.4991582276861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTTTACCAGTTC	-51985056	True	NA	NA	False	AATAAA	-16	NA	51990763	51933056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_51933443_51937293_51937413_51976889_51977118_51990551
transcript_39815.known	chr17	+	2159	13	FSM	ENSG00000108671.11	ENST00000457654.6	2159	13	0	0	0	0	multi-exon	FALSE	canonical	3	2025	junction_5	125.172630794435	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGCCCCCAAGGGGCCT	32411300	True	NA	NA	False	NA	NA	NA	32444473	32481471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488
transcript_39829.known	chr17	+	3024	3	FSM	ENSG00000226377.2	ENST00000435733.2	3024	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGAGATGAAGTGCTTA	32876734	True	NA	NA	False	NA	NA	NA	32876758	32881070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32876894_32877843_32877962_32878299
transcript_39830.known	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	81.8617550433382	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	32922666	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_39835.nic	chr17	+	1629	7	NIC	ENSG00000006042.12	novel	4218	8	NA	NA	41	0	intron_retention	FALSE	canonical	3	384	junction_1	86.3913897458666	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32928033	False	NA	-14	True	NA	NA	NA	32928111	32941613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_32928238_32931326_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_39836.known	chr17	+	1683	7	FSM	ENSG00000006042.12	ENST00000394642.7	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	190.707818985542	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32927717	False	NA	-14	True	NA	NA	NA	32927909	32941613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32928238_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_39839.nnic	chr17	+	1245	6	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	232.996652336466	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32922676	True	NA	-14	True	NA	NA	NA	32928162	32941613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_32928238_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_39840.nnic	chr17	+	1113	5	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	260.105147007898	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32922676	True	NA	-14	True	NA	NA	NA	32928162	32941613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_32928238_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_39842.known	chr17	+	3810	4	FSM	ENSG00000263571.3	ENST00000583224.3	3810	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	13.4742552876052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCACTATTAATACCAC	34155538	False	NA	NA	False	AATAAA	-11	NA	34155565	34165736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34156703_34159042_34159116_34161424_34161900_34163611
transcript_39844.known	chr17	+	1937	3	FSM	ENSG00000263571.3	ENST00000667899.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34155586	False	NA	NA	False	NA	NA	NA	34155613	34162199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34156703_34159042_34159116_34161424
transcript_39845.nnic	chr17	+	1119	3	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	2236	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34157821	False	NA	NA	False	NA	NA	NA	34157849	34162199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_34158121_34159042_34159116_34161424
transcript_39846.known	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	4	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	34254766	True	NA	NA	False	AATAAA	-18	NA	34255284	34257203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34255426_34256221_34256340_34256721
transcript_39847.known	chr17	+	8382	20	FSM	ENSG00000005156.12	ENST00000378526.9	8382	20	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	26.1802826993153	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAGGAGGGAAACTGA	34973480	True	NA	NA	False	NA	NA	NA	34980511	35009743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_39849.known	chr17	-	1847	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	3.39334538463274	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAATATTTAAATATTT	-34961318	True	NA	60	True	AATAAA	-16	NA	34961460	34927860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
transcript_3985.known	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	TRUE	canonical	3	1154	junction_1	115.853355583686	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-52041163	True	NA	-5	True	AATAAA	-15	NA	52055191	52020130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
transcript_39853.nnic	chr17	+	587	3	NNC	ENSG00000198783.6	novel	667	2	NA	NA	0	5834	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTTGCATAGAGTAT	34958983	True	NA	NA	False	NA	NA	NA	34961539	34969611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_34961936_34963023_34963111_34969507
transcript_39854.known	chr17	+	667	2	FSM	ENSG00000198783.6	ENST00000578339.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCTCTTAGTGTGCTT	34962354	False	NA	20	True	CATAAA	-23	NA	34962364	34963186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34962869_34963023
transcript_39857.known	chr17	-	9966	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	14.0712472794703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCTATAAATATGTCA	-35119849	False	NA	-19	True	AATAAA	-17	NA	35119860	35092220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
transcript_39860.known	chr17	-	1571	9	FSM	ENSG00000185379.21	ENST00000586044.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	17.3956711569287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119735	False	286	-12	True	TATAAA	-15	NA	35119746	35100382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_39862.known	chr17	-	1409	8	FSM	ENSG00000185379.21	ENST00000588594.5	1409	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.4975932676836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119708	False	NA	-12	True	TATAAA	-15	NA	35119719	35100382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35107365_35107448_35119110_35119173_35119531
transcript_39863.known	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	22.0661883130428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119734	False	286	-12	True	TATAAA	-15	NA	35119745	35100382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
transcript_39871.nic	chr17	-	1979	14	NIC	ENSG00000073536.18	novel	5193	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	80.1348715175615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTGTGTTGGGTTC	-35136940	True	NA	-48	True	NA	NA	NA	35142313	35132070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_35132450_35133170_35133242_35133338_35133499_35134942_35135060_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_39872.known	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	32.8032857432842	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-35136930	True	NA	13	True	AATAAA	-39	NA	35142303	35128729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_39879.known	chr17	+	10555	5	FSM	ENSG00000166750.10	ENST00000299977.9	10555	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTCTTCTTTCTTCT	35242447	True	NA	NA	False	AATAAA	-24	NA	35243071	35273655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35243144_35258650_35259703_35260970_35261097_35264182_35264904_35265071
transcript_39886.known	chr17	+	963	4	FSM	ENSG00000267364.3	ENST00000662029.1	963	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCATGATGTGATTATT	35313471	True	NA	NA	False	GATAAA	-24	NA	35313648	35325308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35321736_35321866_35323147_35323269_35324653
transcript_39888.known	chr17	+	764	4	FSM	ENSG00000267364.3	ENST00000585387.2	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	35313346	True	NA	NA	False	ATTAAA	-21	NA	35313523	35324909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35321736_35321866_35323147_35323344_35324653
transcript_39890.known	chr17	+	1116	3	FSM	ENSG00000267364.3	ENST00000659130.2	1167	3	51	0	1	0	multi-exon	FALSE	canonical	3	6	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTTATTTCCAGGTT	35313330	True	NA	NA	False	AATATA	-32	NA	35313507	35325449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35323147_35323269_35324653
transcript_39891.known	chr17	+	1219	3	FSM	ENSG00000267364.3	ENST00000662865.1	1219	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	NA	False	NA	NA	False	AATATA	-31	NA	35313478	35325448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35323147_35323344_35324653
transcript_39893.known	chr17	+	1140	3	FSM	ENSG00000267364.3	ENST00000669048.1	1140	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	35313318	True	NA	NA	False	AATATA	-31	NA	35313495	35325448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313645_35323147_35323344_35324653
transcript_39895.known	chr17	-	2506	4	FSM	ENSG00000172123.13	ENST00000304905.10	2506	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.8878405775519	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAAAACAAAACTCCA	-35432195	True	NA	NA	False	AATGAA	-19	NA	35432500	35410921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
transcript_39899.known	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	TRUE	canonical	2	74	junction_14	66.82409982529	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	35580321	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_399.known	chr1	-	1589	3	FSM	ENSG00000127054.22	ENST00000498173.2	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	-1318764	True	NA	-18	True	AATGAA	-15	NA	1324687	1318680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319525_1320455_1321094_1324580
transcript_3990.known	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-52032545	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52032100_52033800
transcript_39900.known	chr17	+	5702	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	0	0	0	0	multi-exon	FALSE	canonical	2	188	junction_9	38.4008788961919	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	35587142	False	NA	NA	False	AATAAA	-14	NA	35587273	35726409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_39903.nic	chr17	+	2476	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_14	69.0255794053545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	35580321	True	NA	12	True	AATAAA	-24	NA	35587321	35660120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_39906.known	chr17	+	2542	14	FSM	ENSG00000006125.18	ENST00000616784.4	2542	14	0	0	0	0	multi-exon	FALSE	canonical	2	188	junction_9	35.796102396009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATCTTTCTTCCCTT	35586787	False	NA	NA	False	NA	NA	NA	35586898	35657791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598
transcript_39907.known	chr17	+	2285	15	FSM	ENSG00000006125.18	ENST00000614600.4	2285	15	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_1	78.2089039244332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCATCTGTTTTTT	35580366	True	NA	NA	False	NA	NA	NA	35587366	35670898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856
transcript_39908.known	chr17	-	1604	3	FSM	ENSG00000108733.11	ENST00000586663.2	1604	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAAGGGAATCATGT	-35577960	True	NA	NA	False	ATTAAA	-15	NA	35578552	35575788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35576182_35577037_35577592_35577895
transcript_39911.known	chr17	+	1298	2	FSM	ENSG00000267321.4	ENST00000592381.1	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTCTGAATGAAAAATT	35565177	True	NA	NA	False	TATAAA	-20	NA	35568119	35574792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35568502_35573876
transcript_3992.known	chr1	+	892	7	FSM	ENSG00000134717.18	ENST00000477828.6	892	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	586.039935120087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACTAAAAGTTTGGT	52037557	True	NA	NA	False	NA	NA	NA	52056198	52086747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52060427_52060660_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_39927.nnic	chr17	+	2094	16	NNC	ENSG00000270647.7	novel	2324	18	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.2326111938378	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	35791448	True	NA	36	True	AATAAA	-20	NA	35809444	35847234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077_35824100_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_39929.known	chr17	+	2140	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	19.2208220427743	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	35791492	True	NA	36	True	AATAAA	-20	NA	35809488	35847234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_39947.known	chr17	-	1163	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13.5451918488526	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	-35930414	True	NA	-17	True	AATAAA	-16	NA	35930773	35918079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_39950.known	chr17	-	1032	6	FSM	ENSG00000278023.7	ENST00000616596.4	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16.004999218994	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	-35930368	False	NA	-3	True	AATAAA	-30	NA	35930727	35918065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_39952.nnic	chr17	-	999	6	NNC	ENSG00000278023.7	novel	779	5	NA	NA	-8	1084	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	17.1860408471527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTCAGAAGCTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	35930781	35921070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_35921349_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_39956.known	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	8.06225774829855	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	-35930381	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_39957.known	chr17	-	588	4	FSM	ENSG00000275718.2	ENST00000617897.2	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGCTGAGCCCCAACA	NA	False	NA	NA	False	AATAAA	-17	NA	36001553	35997581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35997861_35998279_35998392_35998865_35998926_36001416
transcript_39958.known	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_14	30.0763295632961	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-36529937	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_39965.known	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_8	18.0820352836731	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-36529937	True	NA	-23	True	ATTAAA	-21	NA	36534868	36513085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_39966.known	chr17	-	4299	19	FSM	ENSG00000278259.5	ENST00000621550.4	4299	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.3832324233876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCATCTGAATGTCAAG	NA	False	NA	-6	True	AGTAAA	-11	NA	36535457	36495639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36496407_36498265_36498555_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36512657_36512780_36512873_36513506_36513628_36513726_36514445_36514549_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_39967.known	chr17	-	1186	8	FSM	ENSG00000278259.5	ENST00000620640.4	1186	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	56.590545110631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACCGCATGATCAGAAGA	-36529965	True	NA	-103	True	NA	NA	NA	36534896	36513165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36532526_36532682_36533952_36534105_36534760
transcript_39970.known	chr17	+	881	5	FSM	ENSG00000273611.5	ENST00000620863.4	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	230.175476539096	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	36482042	True	NA	79	True	AATAAA	-21	NA	36486699	36495822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36486934_36486967_36492817_36492900_36493925_36494007_36495222
transcript_39972.known	chr17	+	834	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	249.78090399388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	36482037	True	NA	NA	False	NA	NA	NA	36486694	36498148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
transcript_39976.known	chr17	+	926	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	252.248995152717	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCTTTTTAAAGGA	NA	False	NA	80	True	AATAAA	-22	NA	36486628	36495823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
transcript_39978.known	chr17	+	1981	4	FSM	ENSG00000273611.5	ENST00000612728.4	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	269.644622090303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATAAGGCAAAATTGG	36482020	True	NA	NA	False	AATAAA	-26	NA	36486677	36499310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36497605
transcript_39981.known	chr17	+	876	2	FSM	ENSG00000277161.2	ENST00000619326.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCACTGAAGAGGTTAA	36534438	True	NA	NA	False	NA	NA	NA	36535019	36537934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36535055_36537093
transcript_39982.known	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	36535355	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36535602_36537093
transcript_39983.known	chr17	+	2816	2	FSM	ENSG00000277161.2	ENST00000614443.2	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	36534405	True	NA	32	True	AATAAA	-39	NA	36534986	36539303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36535593_36537093
transcript_39984.known	chr17	+	2816	14	FSM	ENSG00000278311.5	ENST00000613102.5	2816	14	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_1	62.5453208462736	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	36544719	False	NA	NA	False	AATAAA	-28	NA	36544918	36589848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
transcript_39989.known	chr17	+	1839	5	FSM	ENSG00000278619.5	ENST00000614766.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_1	16.6789538041209	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	36601560	False	NA	13	True	AATAAA	-14	NA	36601582	36608964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_39990.known	chr17	+	1284	5	FSM	ENSG00000278619.5	ENST00000612760.1	1284	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.6961536499415	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	36601939	False	NA	13	True	AATAAA	-14	NA	36601961	36608964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36602177_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_39993.known	chr17	+	630	1	FSM	ENSG00000275720.1	ENST00000618067.1	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGTTATCTTCATC	NA	False	NA	4	True	AATAAA	-25	NA	36634068	36634698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36634100_36634700
transcript_39998.known	chr17	+	2007	12	FSM	ENSG00000275700.6	ENST00000679997.1	2007	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	159.364803190252	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCTTGTGATTTCTTA	NA	False	NA	30	True	AATAAA	-18	NA	36949007	37056871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031690_37056605
transcript_39999.known	chr17	+	2018	11	FSM	ENSG00000275700.6	ENST00000680340.1	2018	11	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_10	158.11214374614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCTTGTGATTTCTT	NA	False	NA	29	True	AATAAA	-17	NA	36948924	37056870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37056600
transcript_4.known	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	713	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00009_+_0_1000
transcript_40.known	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00108_+_0_1000
transcript_4000.known	chr1	+	4533	6	FSM	ENSG00000134717.18	ENST00000313334.13	4533	6	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	85.5724254652163	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTCTGATGCGGCAG	52037653	True	NA	3	True	AATACA	-17	NA	52056294	52090716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_40000.known	chr17	+	1963	11	FSM	ENSG00000275700.6	ENST00000680579.1	1963	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	170.736785725865	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	NA	False	NA	17	True	AATAAA	-5	NA	36948924	37056858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_40001.known	chr17	+	1940	11	FSM	ENSG00000275700.6	ENST00000616434.2	1940	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	172.248657469369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	NA	False	NA	17	True	AATAAA	-5	NA	36948924	37056858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_40012.known	chr17	+	2712	11	FSM	ENSG00000275700.6	ENST00000679881.1	2712	11	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	42.3839592298785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	NA	False	NA	19	True	AATAAA	-7	NA	36949289	37056860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_40017.nic	chr17	-	771	4	NIC	ENSG00000278540.5	novel	451	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	76.9083148228388	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	-37351788	True	NA	0	True	AATAAA	-24	NA	37359127	37328644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_37328987_37330172_37330426_37339803_37339851_37358998
transcript_40021.nnic	chr17	+	2079	17	NNC	ENSG00000276234.5	novel	2211	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	20.8924889314318	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	37404873	True	NA	16	True	ATTAAA	-17	NA	37406881	37478267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477323_37478025
transcript_40023.known	chr17	+	2211	17	FSM	ENSG00000276234.5	ENST00000620628.4	2211	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	20.8924889314318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	37404881	True	NA	16	True	ATTAAA	-17	NA	37406889	37478267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477491_37478053
transcript_40028.known	chr17	+	4236	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	11.5123122496453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	37404877	True	NA	2	True	AATAAA	-18	NA	37406885	37479725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_40037.known	chr17	+	1043	11	FSM	ENSG00000276234.5	ENST00000620367.4	1043	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12.7608777127594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTCCCCTTTATTAC	37404930	True	NA	4	True	AATAAA	-17	NA	37406938	37465653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430
transcript_40040.known	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	47.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	37489840	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37489959_37510676_37510765_37512180
transcript_40046.known	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_12	43.3856108000083	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-37637235	True	NA	-4	True	AATAAA	-35	NA	37643446	37609738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_4005.known	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	480.551245966546	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	52037662	True	NA	42	True	NA	NA	NA	52056303	52088418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_40055.nic	chr17	-	1693	13	ISM	ENSG00000278053.5	ENST00000617633.5	6383	15	-18	10029	-18	0	5prime_fragment	FALSE	canonical	3	336	junction_10	43.9926603726879	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATCTTGAATTTACCT	-37637253	True	NA	0	True	CATAAA	-22	NA	37643464	37619767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_40057.nic	chr17	-	312	2	ISM	ENSG00000278053.5	ENST00000613633.1	776	6	-31	15302	-18	-11319	5prime_fragment	FALSE	canonical	3	471	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGATGACTTCAGGT	-37637253	True	NA	15	True	AAGAAA	-5	NA	37643464	37642127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_37642309_37643333
transcript_40059.known	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	2	8	junction_9	108.205574167839	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	38257192	38195702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_40070.known	chr17	+	1553	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_4	38.1115441292841	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	38297141	True	NA	12	True	TATAAA	-18	NA	38297167	38323211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
transcript_40072.known	chr17	+	1554	7	FSM	ENSG00000278845.5	ENST00000619548.1	1554	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	286.545371625507	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGATTGTGTTCTTA	NA	False	NA	18	True	TATAAA	-24	NA	38297022	38323217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38322125_38322300_38322508
transcript_40083.known	chr17	-	482	4	FSM	ENSG00000276170.5	ENST00000617855.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.1780056072107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAGAAATTAGCCA	-38451991	True	NA	-27	True	NA	NA	NA	38452444	38450587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451305_38451394_38451625_38451757_38452317
transcript_40085.known	chr17	-	702	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	0	32	0	multi-exon	FALSE	canonical	3	38	junction_2	13.8162545173751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451946	True	NA	NA	False	AATAAA	-33	NA	38452399	38450393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
transcript_40089.nic	chr17	-	867	4	NIC	ENSG00000276170.5	novel	734	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	11.3431330181157	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451979	True	NA	NA	False	AATAAA	-33	NA	38452432	38450393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38450724_38451305_38451526_38451625_38451828_38452317
transcript_4009.known	chr1	+	794	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	441.67550305626	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTCTTTTCCC	52037629	True	NA	9	True	AATAAA	-14	NA	52056270	52087155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
transcript_40090.nic	chr17	-	952	3	ISM	ENSG00000276170.5	ENST00000617990.5	734	4	272	0	204	0	3prime_fragment	FALSE	canonical	3	38	junction_2	16.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451706	False	NA	NA	False	AATAAA	-33	NA	38452159	38450393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_38450724_38451305_38451394_38451625
transcript_40091.nic	chr17	-	1098	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-248	0	190	0	multi-exon	FALSE	canonical	3	46	junction_2	12.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451720	False	NA	NA	False	AATAAA	-33	NA	38452173	38450393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451305_38451526_38451625
transcript_40093.nic	chr17	-	647	3	FSM	ENSG00000276170.5	ENST00000688817.1	654	3	7	0	-1	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451979	True	NA	NA	False	AATAAA	-33	NA	38452432	38450393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451625_38451828_38452317
transcript_40094.known	chr17	-	468	3	FSM	ENSG00000276170.5	ENST00000613481.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGATTCCTCCAACAC	-38451910	True	NA	NA	False	NA	NA	NA	38452363	38451305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38451526_38451625_38451828_38452317
transcript_40096.known	chr17	-	419	2	FSM	ENSG00000276170.5	ENST00000622796.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCCCGAGGAACATGG	-38451493	False	NA	-65	True	NA	NA	NA	38451946	38450625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451625
transcript_40097.nic	chr17	-	1549	2	NIC	ENSG00000276170.5	novel	654	3	NA	NA	-1	0	intron_retention	FALSE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451979	True	NA	NA	False	AATAAA	-33	NA	38452432	38450393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38451828_38452317
transcript_40098.known	chr17	+	2296	1	FSM	ENSG00000277969.1	ENST00000612330.1	2296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCGTGTGAGAGCGTC	NA	False	NA	NA	False	AATAAA	-20	NA	38702451	38704747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38702500_38704700
transcript_401.nic	chr1	-	2061	3	NIC	ENSG00000127054.22	novel	1104	4	NA	NA	-7	0	intron_retention	FALSE	canonical	3	487	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	-1318771	True	NA	-18	True	AATGAA	-15	NA	1324694	1318680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1320530_1320995_1321094_1324580
transcript_40101.nnic	chr17	-	1365	11	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.3070170639456	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	38748400	38733899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38734254_38735491_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_40102.known	chr17	-	1534	11	FSM	ENSG00000277258.5	ENST00000616129.4	1534	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	50.0880225203591	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	NA	False	NA	-25	True	AATATA	-43	NA	38748378	38735043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
transcript_40105.known	chr17	-	1499	10	FSM	ENSG00000277258.5	ENST00000618941.4	1499	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.6897751751478	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGTTTTATAAATAAAT	-38748173	False	NA	-35	True	NA	NA	NA	38748184	38735108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
transcript_40106.nnic	chr17	-	1459	10	NIC	ENSG00000277258.5	novel	1534	11	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.2907858705985	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	NA	False	NA	-25	True	AATATA	-43	NA	38748400	38735043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_40112.known	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	40.3429740544194	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	38728071	True	NA	NA	False	NA	NA	NA	38730340	38735605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
transcript_40119.known	chr17	+	762	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	2579	junction_5	148.776879924268	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724830	True	NA	27	True	AATAAA	-16	NA	38752740	38764225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
transcript_40120.known	chr17	+	662	6	FSM	ENSG00000277791.5	ENST00000613870.4	662	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1140.99791410852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724853	True	NA	27	True	AATAAA	-16	NA	38752763	38764225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760507_38760609_38762410_38762506_38764118
transcript_40126.known	chr17	+	552	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	1167.35373816166	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724862	True	NA	27	True	AATAAA	-16	NA	38752772	38764225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
transcript_40128.known	chr17	+	426	3	FSM	ENSG00000277791.5	ENST00000614132.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2579	junction_2	119.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38760351	False	NA	27	True	AATAAA	-16	NA	38760384	38764225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38760609_38762410_38762506_38764118
transcript_40129.known	chr17	-	5383	10	FSM	ENSG00000276293.5	ENST00000619039.5	5383	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_2	13.7517675631575	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	NA	False	NA	-8	True	AATAAA	-20	NA	38799556	38765690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
transcript_40137.known	chr17	-	3067	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	23.4841685575518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	-38824919	True	NA	-8	True	AATAAA	-30	NA	38825321	38800440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40138.nic	chr17	-	2263	10	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	0	254	intron_retention	FALSE	canonical	3	45	junction_5	27.8505712865581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTTGGTCAATGAC	NA	False	NA	-2	True	AAAAAG	-17	NA	38825355	38801470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40143.nic	chr17	-	693	5	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-34	10132	0	-219	5prime_fragment	FALSE	canonical	3	101	junction_3	10.5593560409714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAGAAAAAGAAGG	NA	False	NA	-1	True	NA	NA	NA	38825355	38810572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40147.known	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	3917.6953285701	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-38793935	False	NA	-16	True	AATAAA	-25	NA	38853428	38850080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
transcript_40153.known	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_4	1166.50618836764	2281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	-38794228	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_40155.known	chr17	-	615	4	FSM	ENSG00000125691.14	ENST00000577407.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_3	1297.36305207482	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAAAACTA	-38794244	True	NA	6	True	NA	NA	NA	38853737	38850113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853697
transcript_40156.known	chr17	-	625	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_1	3412.1314511607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	-38794229	True	NA	NA	False	ATTAAA	-17	NA	38853722	38847864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_40157.known	chr17	-	2779	3	FSM	ENSG00000125691.14	ENST00000584912.5	2779	3	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_2	1383.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-38794247	True	NA	-16	True	AATAAA	-25	NA	38853740	38850080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38852733_38853021_38853106_38853697
transcript_40158.known	chr17	+	3910	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_6	23.6008474424119	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	38863635	True	NA	33	True	AATAAA	-22	NA	38870057	38921770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
transcript_40160.known	chr17	+	3492	8	FSM	ENSG00000002834.18	ENST00000435347.7	3492	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	172.503771032427	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGACTTGGTTTCCT	38863720	False	NA	24	True	AATAAA	-13	NA	38870142	38921761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604_38919983_38920306
transcript_40161.known	chr17	+	3692	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAGAATTATAAATTA	38925154	False	NA	NA	False	AATAAA	-22	NA	38925167	38929384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38925892_38926416
transcript_40164.known	chr17	+	2698	4	FSM	ENSG00000214553.11	ENST00000647826.2	2714	4	0	16	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	19.3275853524323	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCACTCTGCAAAGAAT	39033098	False	NA	-1	True	AATAAA	-31	NA	39033108	39053199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39033446_39034169_39034242_39044387_39046342_39052864
transcript_4017.known	chr1	+	608	3	FSM	ENSG00000134717.18	ENST00000524414.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	76.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACCCTAGCTGGAATG	52037672	True	NA	NA	False	NA	NA	NA	52056313	52065299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52064824
transcript_40170.known	chr17	+	2305	5	FSM	ENSG00000263818.5	ENST00000583447.5	2305	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	3.35410196624968	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	39056816	True	NA	NA	False	NA	NA	NA	39057018	39081451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39057160_39063421_39063547_39072466_39072592_39073067_39073334_39079803
transcript_40171.known	chr17	-	3722	13	FSM	ENSG00000067191.16	ENST00000622445.4	3722	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	9.992705672973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTGTGGCATCACTGT	-39196005	True	NA	NA	False	AATACA	-15	NA	39197703	39173455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_40172.known	chr17	-	1753	13	FSM	ENSG00000067191.16	ENST00000394310.7	1753	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	17.2183687445188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	-39196004	True	NA	NA	False	NA	NA	NA	39197702	39177135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_40173.known	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1265	junction_1	5674.85391530037	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	39051176	True	NA	15	True	AATAAA	-1	NA	39200341	39204711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40174.known	chr17	+	792	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6160.2156001231	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	39051179	True	NA	24	True	AATAAA	-10	NA	39200344	39204720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40177.known	chr17	+	690	6	FSM	ENSG00000108298.12	ENST00000579374.5	690	6	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	5921.76214990099	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	39051150	True	NA	31	True	AATAAA	-17	NA	39200315	39204727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200350_39201221_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40178.known	chr17	+	1247	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	10414	junction_1	2025.40100967685	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	39051151	True	NA	31	True	AATAAA	-17	NA	39200316	39204727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
transcript_4018.known	chr1	-	3121	17	FSM	ENSG00000085840.13	ENST00000371568.8	3121	17	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	27.1937492817743	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGAAGTTATTACA	-52399469	True	NA	-2	True	ATTAAA	-19	NA	52404423	52372828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
transcript_40180.known	chr17	+	645	1	FSM	ENSG00000273576.1	ENST00000615852.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGCCTAAACTCCCTT	39566903	False	NA	8	True	AATAAA	-16	NA	39566914	39567559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39566900_39567600
transcript_40181.known	chr17	+	1815	7	FSM	ENSG00000131771.14	ENST00000254079.9	1815	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	4.52462398683274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	39626149	True	NA	14	True	AATAAA	-14	NA	39626951	39636624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_40182.known	chr17	+	1504	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	27.92499875659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACTCCTCTTTCAGG	39628375	True	NA	16	True	AATAAA	-16	NA	39628497	39636626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_40183.known	chr17	+	1466	5	FSM	ENSG00000131771.14	ENST00000579000.5	1466	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.6674242345982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGACTCCTCTTT	39627165	False	NA	12	True	AATAAA	-12	NA	39627199	39636622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39627474_39629169_39629231_39633882_39634087_39635606_39635727_39635815
transcript_40185.known	chr17	+	1666	15	FSM	ENSG00000131748.16	ENST00000544210.6	1666	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	142.364812351642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTGGCTGGAGGAAGT	39631948	True	NA	NA	False	NA	NA	NA	39637140	39663094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972_39658027_39658404_39658523_39658708_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40188.nic	chr17	+	2104	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_4	99.1886730284404	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631887	True	NA	37	True	ATTAAA	-27	NA	39637079	39663484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40191.known	chr17	+	2770	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	22.2633816673323	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGCTCAGTAATCAAT	39631951	True	NA	12	True	ATTAAA	-18	NA	39637143	39664201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40200.nic	chr17	+	1964	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	108.097534306185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631941	True	NA	37	True	ATTAAA	-27	NA	39637133	39663484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40202.nic	chr17	+	2252	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	391	junction_1	21.9207826059922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631951	True	NA	37	True	ATTAAA	-27	NA	39637143	39663484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40204.known	chr17	+	1949	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	113.782206572664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	39631951	True	NA	-13	True	NA	NA	NA	39637143	39663434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40207.known	chr17	+	821	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	39667967	False	NA	3	True	AATAAA	-15	NA	39667980	39670473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39668071_39669628_39669837_39669950
transcript_4021.known	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	311	junction_3	38.6957106756209	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	52399140	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_40210.known	chr17	-	2687	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	23.5415394915594	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39686187	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_40211.known	chr17	-	3028	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	22.5345413877353	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-39686187	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_40214.known	chr17	-	2220	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	65.4488774201327	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39686187	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
transcript_40215.known	chr17	-	1397	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	28.3117564901148	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTGTACAAAGCCTGG	-39723999	True	NA	NA	False	AGTAAA	-15	NA	39730532	39728509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
transcript_40217.known	chr17	-	806	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_2	33.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAACTAGTGTGTGTT	-39723977	True	NA	-8	True	AGTAAA	-18	NA	39730510	39729157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729762_39730193_39730292_39730406
transcript_40218.known	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	24.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723958	True	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729606_39729684_39729762_39730193
transcript_40219.known	chr17	-	925	2	FSM	ENSG00000141741.12	ENST00000498164.2	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCTAACTAGTGTGTG	-39723983	True	NA	-10	True	AGTAAA	-16	NA	39730516	39729159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729762_39730193
transcript_40220.known	chr17	+	2233	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	38.4567077029085	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39737324	True	NA	24	True	AATAAA	-18	NA	39737937	39747285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_40222.known	chr17	+	2093	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	23.8824715843983	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39736748	True	NA	24	True	AATAAA	-18	NA	39738336	39747285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_40224.nic	chr17	+	2406	14	NIC	ENSG00000141738.14	novel	2233	15	NA	NA	-250	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	48.8988812930928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39737660	False	NA	24	True	AATAAA	-18	NA	39737676	39747285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_40226.nic	chr17	+	2051	14	NIC	ENSG00000141738.14	novel	2093	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	38.9223168061991	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39736702	True	NA	24	True	AATAAA	-18	NA	39738290	39747285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_40233.known	chr17	-	1427	9	FSM	ENSG00000073605.19	ENST00000394179.5	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	11.6505096455048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTCTTTTGAAGCCT	-39917288	False	NA	-2	True	ATTAAA	-21	NA	39917316	39904596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39908957_39909043_39909755_39909925_39912325_39912498_39917081
transcript_40234.known	chr17	-	1127	8	FSM	ENSG00000073605.19	ENST00000523371.5	1127	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	12.9267954581298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAAAGCCCTTTCTCCC	-39917288	False	NA	NA	False	NA	NA	NA	39917316	39904811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39909755_39909925_39912325_39912498_39917081
transcript_40235.known	chr17	-	1626	8	FSM	ENSG00000073605.19	ENST00000394175.6	1626	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.4984165215603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	-39910645	False	NA	0	True	ATTAAA	-23	NA	39917540	39904594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39908957_39909043_39909755_39909925_39912325_39912498_39917081
transcript_40237.known	chr17	-	2109	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.46337971105226	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCTGGCCTTCGC	-39920706	True	NA	-14	True	AATAAA	-20	NA	39927601	39921042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
transcript_40238.known	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	63.9788188090273	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	39955868	True	NA	16	True	AATAAA	-16	NA	39980806	39997959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
transcript_4024.known	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	132.545102065797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	52399166	True	NA	28	True	ATTAAA	-22	NA	52404627	52417022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_40241.known	chr17	+	2538	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	5.80123443653627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	40062798	False	NA	17	True	CATAAA	-18	NA	40062809	40093867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
transcript_40242.known	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	8.65200224555813	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-40100001	True	NA	-6	True	NA	NA	NA	40100589	40092792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
transcript_40243.known	chr17	-	3480	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_25	41.7057118390275	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-40049941	True	NA	-13	True	AATAAA	-17	NA	40054408	40019103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_40244.known	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_13	58.8052648289048	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	40126932	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
transcript_40249.known	chr17	+	7492	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	10.2180312812844	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	40217210	True	NA	16	True	AATAAA	-21	NA	40219303	40284136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_40257.known	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_11	49.0477925131521	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	40269477	True	NA	9	True	AATAAA	-19	NA	40287878	40304657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_40262.known	chr17	+	1948	12	FSM	ENSG00000094804.12	ENST00000649662.1	1948	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	227.280908943642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTATCTCTAG	40269531	True	NA	-79	True	CATAAA	-41	NA	40287932	40302236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40287950_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_40274.known	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	17.0861786248418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	40317065	True	NA	NA	False	NA	NA	NA	40318280	40356331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_40275.known	chr17	+	2285	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.3141017767797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	40342247	True	NA	7	True	NA	NA	NA	40342362	40356795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_40278.known	chr17	-	5695	35	FSM	ENSG00000131747.15	ENST00000423485.6	5695	35	0	0	0	0	multi-exon	TRUE	canonical	1	587	junction_4	173.805694815138	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAATGCCTCTTTTA	-40393709	True	NA	-5	True	AATAAA	-19	NA	40417896	40388524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_4028.known	chr1	+	1229	3	FSM	ENSG00000116157.6	ENST00000361314.5	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	21.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATAGTCTCCCTCCC	52601217	True	NA	12	True	AATAAA	-20	NA	52602370	52609051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52602548_52606683_52606946_52608261
transcript_40280.nic	chr17	-	3943	29	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	6944	-47	914	5prime_fragment	FALSE	canonical	3	1133	junction_20	112.399495922684	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAGAAAAGAGAACCAG	-40393756	True	NA	NA	False	AAAACA	-13	NA	40417943	40395468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40281.nic	chr17	-	3856	28	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	7774	-47	84	5prime_fragment	FALSE	canonical	3	1133	junction_19	112.656706891697	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAATTAAGGTAA	-40393756	True	NA	NA	False	AAGAAA	-3	NA	40417943	40396298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40284.nic	chr17	-	943	7	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	24232	-47	723	5prime_fragment	FALSE	canonical	3	1135	junction_3	87.537452302175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTTTCCTGGATGTTA	-40393756	True	NA	NA	False	AATAAA	-9	NA	40417943	40412756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40286.nic	chr17	-	456	4	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	27508	-47	-2553	5prime_fragment	FALSE	canonical	3	1306	junction_2	40.5736641458745	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGTATTAGAGTCACA	-40393756	True	NA	NA	False	NA	NA	NA	40417943	40416032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40287.nic	chr17	-	226	2	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	28318	-47	-3363	5prime_fragment	FALSE	canonical	3	1390	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGACTGTCTGTTGAAA	-40393756	True	NA	-21	True	AATAAA	-19	NA	40417943	40416842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40416896_40417770
transcript_40288.known	chr17	+	2205	4	FSM	ENSG00000141753.7	ENST00000269593.5	2205	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	25.381533094402	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTGGTTGAT	40437552	True	NA	12	True	AAAACA	-23	NA	40443449	40457725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40444085_40452984_40453143_40453927_40454063_40456448
transcript_40289.known	chr17	-	2488	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	416.864982006333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAAAAGGTCTCAG	-40639966	True	NA	NA	False	AATAAA	-6	NA	40647837	40627721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40294.known	chr17	-	5150	11	FSM	ENSG00000073584.20	ENST00000348513.12	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_2	75.0392563929041	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTTAAGAGCCTGA	-40639947	True	NA	0	True	ATTAAA	-18	NA	40647818	40624961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40298.known	chr17	-	2840	10	FSM	ENSG00000073584.20	ENST00000647508.1	2840	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	358.912279939483	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAAGGTCTCAGTGT	-40648315	False	NA	NA	False	AATAAA	-9	NA	40648370	40627718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_403.known	chr1	-	2428	2	FSM	ENSG00000127054.22	ENST00000496353.1	2428	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTATCTTTTTTG	-1318688	True	NA	-34	True	NA	NA	NA	1324611	1318696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1321094_1324580
transcript_40302.known	chr17	-	2856	10	FSM	ENSG00000073584.20	ENST00000469334.6	2856	10	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_2	72.363281050851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTATATGTTTCTTAAAG	-40639953	True	NA	NA	False	AATAGA	-26	NA	40647824	40627762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40305.known	chr17	-	1569	9	FSM	ENSG00000073584.20	ENST00000431889.6	1569	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	383.307460630497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTACAGCTCACTGGG	-40639968	True	NA	NA	False	NA	NA	NA	40647839	40628467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40647772
transcript_40309.known	chr17	-	2703	6	FSM	ENSG00000213424.9	ENST00000394052.5	2703	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-40665089	True	NA	NA	False	AATAAA	-19	NA	40665177	40654664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40665003
transcript_4031.known	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	-52693587	False	NA	-96	True	NA	NA	NA	52698068	52687561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52688169_52692726_52692868_52697908
transcript_40311.known	chr17	-	2764	6	FSM	ENSG00000213424.9	ENST00000394049.5	2764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-40665068	True	NA	NA	False	AATAAA	-19	NA	40665156	40654664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40664921
transcript_40313.known	chr17	-	2156	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	4.32049379893857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCCTAGTTATGCAT	-40639975	True	NA	-9	True	AATAAA	-16	NA	40647846	40640573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40315.nic	chr17	+	625	4	NIC	ENSG00000167920.11	novel	611	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	42.1294301989582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTGG	40818063	True	NA	2	True	ATTAAA	-12	NA	40819112	40836267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_40819209_40833114_40833200_40834381_40834520_40835961
transcript_40316.known	chr17	+	854	3	FSM	ENSG00000167920.11	ENST00000436612.5	854	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	51	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTTTCATGACTTCT	40818056	True	NA	9	True	AATAAA	-15	NA	40819105	40835085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40819171_40833114_40833200_40834381
transcript_40318.known	chr17	+	2070	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	9	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGGTTT	40818063	True	NA	5	True	ATTAAA	-15	NA	40819112	40836270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40819209_40833114_40833200_40834381
transcript_40320.known	chr17	-	2163	8	FSM	ENSG00000186395.9	ENST00000635956.2	2163	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.0937311256219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	40822614	40818116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40818483_40818766_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_40321.known	chr17	-	2143	8	FSM	ENSG00000186395.9	ENST00000269576.6	2143	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	492.697365405531	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	40822614	40818116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40818483_40818786_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_40322.known	chr17	+	789	2	FSM	ENSG00000167920.11	ENST00000670968.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTAGTTTTCATGACT	NA	False	NA	6	True	AATAAA	-12	NA	40833111	40835082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40833200_40834381
transcript_40324.known	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_5	79.8298189901493	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-41525899	True	NA	-6	True	AATAAA	-19	NA	41528308	41523616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
transcript_40326.known	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	325.419046086051	3360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	41632428	True	NA	11	True	AATAAA	-17	NA	41688884	41692668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
transcript_40331.known	chr17	+	1428	3	FSM	ENSG00000173812.11	ENST00000482111.1	1428	3	0	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	386.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	41632438	False	NA	-2	True	TTTAAA	-10	NA	41688894	41691622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41689070_41689777_41690190_41690781
transcript_40333.known	chr17	+	1120	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2284	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	41632444	False	NA	6	True	AATAAA	-2	NA	41688900	41691630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41689070_41690087_41690190_41690781
transcript_40335.known	chr17	+	465	3	FSM	ENSG00000184502.4	ENST00000329402.4	465	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGACTGTGTCAGTGT	41712319	True	NA	NA	False	AATAAA	-16	NA	41712330	41715969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41712388_41715431_41715648_41715777
transcript_40337.nnic	chr17	-	3259	15	NNC	ENSG00000173801.17	novel	3200	15	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_14	114.248141145062	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773371	True	NA	-1	True	AATAAA	-19	NA	41786735	41754603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786565
transcript_40338.known	chr17	-	3200	15	FSM	ENSG00000173801.17	ENST00000310706.9	3200	15	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	75.8590597013667	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773334	True	NA	-1	True	AATAAA	-19	NA	41786698	41754603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_40339.known	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	20.0929936809259	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	41799427	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_4034.known	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	13.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-52693866	True	NA	-14	True	ATTAAA	-8	NA	52698347	52684448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52688169_52692726_52692868_52698220
transcript_40346.nic	chr17	+	2489	9	NIC	ENSG00000141756.19	novel	2585	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	34.0073521462639	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	41799377	True	NA	13	True	AATAAA	-13	NA	41812953	41823213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_41813280_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_40362.nic	chr17	+	1515	4	ISM	ENSG00000141756.19	ENST00000321562.9	2585	10	-313	4242	-4	475	5prime_fragment	FALSE	canonical	3	74	junction_3	11.0855260988773	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGGGTGCTTTATTC	41812616	False	NA	NA	False	NA	NA	NA	41812690	41818971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381
transcript_40363.nic	chr17	+	1345	3	ISM	ENSG00000141756.19	ENST00000585664.5	598	5	282	-473	-27	473	intron_retention	FALSE	canonical	3	90	junction_2	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGGGGTGCTTTAT	41799385	True	NA	NA	False	NA	NA	NA	41812961	41818969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41817057_41817204_41818088
transcript_40365.nic	chr17	+	1106	3	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-35	4240	-35	475	5prime_fragment	FALSE	canonical	3	14	junction_1	30	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGGGTGCTTTATTC	41799377	True	NA	NA	False	NA	NA	NA	41812953	41818971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41818088_41818279_41818381
transcript_40366.nic	chr17	+	1208	2	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-35	4241	-35	474	intron_retention	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGGGTGCTTTATT	41799377	True	NA	NA	False	NA	NA	NA	41812953	41818970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41818088
transcript_40367.nic	chr17	-	1471	10	NIC	ENSG00000141698.17	novel	1573	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	243.701902503757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-41828054	True	NA	-49	True	TTTAAA	-17	NA	41836267	41825226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587_41835683_41835858_41835958_41836078
transcript_40370.nic	chr17	-	1376	9	NIC	ENSG00000141698.17	novel	1408	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	179.617258009914	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-41828054	True	NA	-49	True	TTTAAA	-17	NA	41836267	41825226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_40371.known	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	133.413829867821	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-41828019	True	NA	NA	False	NA	NA	NA	41836232	41825056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_40374.known	chr17	-	730	8	FSM	ENSG00000141698.17	ENST00000415460.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	204.078716305693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGGCGGGAGCGCTAC	-41828028	True	NA	NA	False	NA	NA	NA	41836241	41825653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_40379.known	chr17	-	4293	29	FSM	ENSG00000131473.17	ENST00000352035.7	4293	29	0	0	0	0	multi-exon	TRUE	canonical	3	805	junction_16	278.84096850048	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGCTCCTGGCATC	-41882131	True	NA	-17	True	AATAAA	-23	NA	41918951	41866917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_40381.known	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_27	336.773193430598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	-41882202	True	NA	-13	True	AATAAA	-20	NA	41919022	41867573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_40385.known	chr17	+	3146	12	FSM	ENSG00000204815.10	ENST00000377540.6	3146	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.66597787247549	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTCACTCACTTCCT	41930417	True	NA	NA	False	AATAAA	-38	NA	41930616	41966503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41930838_41935216_41935349_41935598_41935750_41936472_41936535_41936761_41936928_41938556_41938782_41938964_41939173_41945135_41945223_41949152_41949350_41955216_41955318_41961381_41961467_41964992
transcript_40388.known	chr17	-	1876	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	273.63005712689	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	-42007895	True	NA	-38	True	ATTAAA	-20	NA	42017431	41976456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_4039.known	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	-52772632	False	NA	NA	False	NA	NA	NA	52772648	52772193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52772200_52772600
transcript_40390.known	chr17	-	1774	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_13	209.428752483664	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	-42014387	False	9536	16	True	NA	NA	NA	42017151	41976478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
transcript_40391.known	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_13	203.699395647072	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42014398	False	9536	-28	True	NA	NA	NA	42017162	41976522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
transcript_40392.known	chr17	-	1719	14	FSM	ENSG00000168259.17	ENST00000674233.1	1719	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	219.702757777748	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42007895	True	NA	-28	True	NA	NA	NA	42017431	41976522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982245_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_40393.known	chr17	-	1692	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	178.367879932784	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGGGGTGGACAGGGA	-42015762	True	NA	-43	True	NA	NA	NA	42018526	41976537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_404.known	chr1	+	2154	3	FSM	ENSG00000224051.7	ENST00000343938.9	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGCCTGATTTCCTGC	1323296	True	NA	23	True	AATAAA	-37	NA	1324801	1328896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1325103_1326835_1327033_1327240
transcript_40406.known	chr17	+	997	5	FSM	ENSG00000168256.18	ENST00000485789.5	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	109.68449069946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	42014308	True	NA	NA	False	NA	NA	NA	42020077	42024265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022564_42022641_42023653
transcript_40408.known	chr17	+	992	5	FSM	ENSG00000168256.18	ENST00000479407.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	111.813460728125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	42014308	True	NA	NA	False	NA	NA	NA	42020077	42024265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022569_42022641_42023653
transcript_40411.known	chr17	+	5172	4	FSM	ENSG00000173786.17	ENST00000393892.8	5172	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	3.39934634239519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGTATTTGATTCCAT	41964159	True	NA	12	True	AATAAA	-21	NA	41966794	41977740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41966888_41968067_41968741_41971891_41972032_41973474
transcript_40412.known	chr17	+	1041	4	FSM	ENSG00000168256.18	ENST00000491638.5	1041	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	121.387350613187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTCTGAGTTCCTATT	42014334	True	NA	NA	False	NA	NA	NA	42020103	42024220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022375_42022641_42023653
transcript_40414.known	chr17	+	1461	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	116.810387665938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	42014336	True	NA	NA	False	NA	NA	NA	42020105	42024833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
transcript_40416.known	chr17	+	2453	4	FSM	ENSG00000168256.18	ENST00000393885.9	2453	4	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	23.2522400354604	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	42014320	True	NA	32	True	AATAAA	-21	NA	42020089	42025641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022641_42023653
transcript_40419.known	chr17	+	1598	4	FSM	ENSG00000168256.18	ENST00000393881.7	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	133.868094281896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	42014327	True	NA	NA	False	NA	NA	NA	42020096	42024774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021544_42021672_42022398_42022641_42023653
transcript_40421.known	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.33999733546454	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-42028434	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
transcript_40423.known	chr17	+	563	3	FSM	ENSG00000168256.18	ENST00000587337.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCCCCTCAGCCGGA	42014302	True	NA	NA	False	NA	NA	NA	42020071	42023841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42022398_42022641_42023653
transcript_40424.nic	chr17	+	1303	2	ISM	ENSG00000173786.17	ENST00000393892.8	5172	4	-49	8512	-17	559	5prime_fragment	FALSE	canonical	3	306	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGATGGTTCTCAGGCC	41964110	True	NA	NA	False	ATTAAA	-22	NA	41966745	41969228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41966888_41968067
transcript_40425.known	chr17	+	2583	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	139.557236366382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	41964179	True	NA	17	True	AATAAA	-17	NA	41966814	41975176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
transcript_40427.nic	chr17	-	1384	6	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	12.9089116504839	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	-42107736	True	NA	0	True	AATAAA	-21	NA	42107844	42101403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603
transcript_40428.nnic	chr17	-	1172	5	NNC	ENSG00000108771.13	novel	2591	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.2741809737743	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	-42107736	True	NA	0	True	AATAAA	-21	NA	42107844	42101403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_42101947_42102215_42102292_42104765_42104928_42105017_42105168_42107603
transcript_40431.nnic	chr17	-	865	3	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	29.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	-42107720	True	NA	0	True	AATAAA	-21	NA	42107828	42101403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42101947_42102215_42102313_42107603
transcript_40432.known	chr17	-	782	3	FSM	ENSG00000108771.13	ENST00000589979.1	782	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	-42104799	False	NA	0	True	AATAAA	-21	NA	42104907	42101403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42101947_42102215_42102313_42104765
transcript_40437.known	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	31.6455368101096	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-42141450	True	NA	-3	True	AATATA	-23	NA	42154989	42124978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
transcript_40440.known	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-42193837	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_40441.known	chr17	-	2496	10	FSM	ENSG00000167925.16	ENST00000414034.7	2496	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.97791931915893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGCCTCAGGGTCTGC	-42193837	True	NA	-1	True	AATAAA	-15	NA	42194494	42189087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42189922_42190184_42190360_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_40442.known	chr17	-	5079	19	FSM	ENSG00000173757.10	ENST00000293328.8	5079	19	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_18	19.8236826816242	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATTGAGTCCTGTTTTT	-42274472	True	NA	-8	True	AATAAA	-18	NA	42276391	42199176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42201865_42202339_42202448_42202756_42202809_42207557_42207729_42210170_42210302_42210402_42210498_42211983_42212191_42216013_42216107_42217159_42217283_42217376_42217465_42218150_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
transcript_40443.known	chr17	-	3319	24	FSM	ENSG00000168610.16	ENST00000585517.5	3319	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	144.080278504951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTTCAGTTAACAGC	-42377170	True	NA	NA	False	NA	NA	NA	42388439	42314853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
transcript_40444.known	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	116.750505477709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-42377145	True	NA	-4	True	AATAGA	-13	NA	42388414	42315558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_40445.known	chr17	-	4890	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	103.265748168507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-42377242	True	NA	-37	True	NA	NA	NA	42388511	42313420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_40446.known	chr17	-	3570	2	FSM	ENSG00000177469.13	ENST00000357037.6	3570	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTGATTGTATTCT	-42421633	True	NA	-1	True	AATAAA	-19	NA	42423256	42402448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42405389_42422626
transcript_40447.known	chr17	+	4110	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	45.7334669580166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	42450806	True	NA	20	True	AATAAA	-24	NA	42458879	42522582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_40448.known	chr17	+	3028	21	FSM	ENSG00000033627.17	ENST00000393829.6	3028	21	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_5	29.8690475241512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGACTTTGAGTTCCCT	42450770	True	NA	NA	False	NA	NA	NA	42458843	42521485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_40452.known	chr17	+	1797	5	FSM	ENSG00000033627.17	ENST00000588629.1	1797	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	15.204851199535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGACTTGGTTGGGC	42450784	True	NA	NA	False	NA	NA	NA	42458857	42471439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089
transcript_40455.known	chr17	+	1976	11	FSM	ENSG00000068120.15	ENST00000590958.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	170.094561935413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGCTCACCCTGGTT	42555785	True	NA	NA	False	NA	NA	NA	42562150	42566037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42562220_42562355_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_40456.nic	chr17	+	1834	10	NIC	ENSG00000068120.15	novel	2071	10	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	146.542371574459	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555711	True	NA	14	True	ATTAAA	-14	NA	42562076	42566274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42562220_42562932_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_40458.known	chr17	+	2071	10	FSM	ENSG00000068120.15	ENST00000421097.6	2071	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	136.185421891634	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	42555781	True	NA	0	True	NA	NA	NA	42562146	42566260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_40460.nic	chr17	+	2352	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	126.789803694886	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555782	True	NA	14	True	ATTAAA	-14	NA	42562147	42566274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_40462.known	chr17	+	2479	9	FSM	ENSG00000068120.15	ENST00000393818.3	2479	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	36.8510515453766	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	42555782	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_40472.nnic	chr17	+	1192	8	NIC	ENSG00000068120.15	novel	2071	10	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	168.543096892765	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555748	True	NA	14	True	ATTAAA	-14	NA	42562113	42566274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42562220_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_40480.known	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	-42552235	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42552400_42554700
transcript_40484.known	chr17	+	2360	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	158.690817346827	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	42562599	True	NA	10	True	AATAAA	-23	NA	42567099	42573203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_40489.known	chr17	+	2586	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	88.3462575579169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_40492.known	chr17	-	1408	8	FSM	ENSG00000131470.15	ENST00000253789.9	1408	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.474626903538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATATGTAGTGCTGT	NA	False	NA	-14	True	AATAAA	-4	NA	42577831	42572322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573588_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_40494.known	chr17	-	902	8	FSM	ENSG00000131470.15	ENST00000588544.5	902	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	143.512070174304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	42577795	42572961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577079_42577303_42577460_42577562_42577652
transcript_40495.known	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_7	67.1686880403453	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-42572221	True	NA	-1	True	AATAAA	-17	NA	42577729	42572309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_40497.nic	chr17	-	1283	8	NIC	ENSG00000131470.15	novel	1355	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_4	121.843492787649	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-42572246	True	NA	-1	True	AATAAA	-17	NA	42577754	42572309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460_42577562_42577652
transcript_405.known	chr1	+	1101	2	FSM	ENSG00000224051.7	ENST00000464957.1	1101	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTATTACACGCGT	NA	False	NA	NA	False	NA	NA	NA	1324755	1327994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1325103_1327240
transcript_40504.known	chr17	+	2334	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	204.844181974712	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_40509.known	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	43.1380213835647	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	-42572189	True	NA	-34	True	NA	NA	NA	42577697	42572342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
transcript_4051.known	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_6	28.1810723626013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	-52920760	True	NA	2	True	AATAAA	-38	NA	52921740	52895909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_40511.known	chr17	-	664	7	FSM	ENSG00000131470.15	ENST00000590760.5	664	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	124.176845220391	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	-42572188	True	NA	NA	False	NA	NA	NA	42577696	42572961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460
transcript_40513.known	chr17	-	1244	7	FSM	ENSG00000131470.15	ENST00000589505.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_6	68.4876306755866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	42577795	42572961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42574211_42577212_42577303_42577460_42577562_42577652
transcript_40518.known	chr17	+	2537	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.973178065861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
transcript_40529.known	chr17	+	542	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGCGCGCTTCTGT	42577683	True	NA	6	True	AATAAA	-15	NA	42577824	42578366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42577800_42578400
transcript_4053.nic	chr1	-	1356	10	NIC	ENSG00000121310.17	novel	1676	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	30.3571335200733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920774	True	NA	-18	True	ATTAAA	-6	NA	52921754	52896231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52913894_52914096_52921552
transcript_40532.known	chr17	+	1608	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	94.0370139891734	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	42592261	True	NA	13	True	AATAAA	-19	NA	42609682	42615238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_40533.known	chr17	+	1776	11	FSM	ENSG00000131462.9	ENST00000681413.1	1776	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	535.276601394083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	42592219	True	NA	1	True	AATAAA	-7	NA	42609640	42615226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614137_42614259_42614413_42614495_42614658_42614843
transcript_40536.known	chr17	+	1719	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	96.0417861733008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592219	True	NA	-1	True	AATAAA	-5	NA	42609640	42615224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
transcript_40537.known	chr17	+	1899	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_7	77.5241897732572	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	42592219	True	NA	1	True	AATAAA	-7	NA	42609640	42615226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
transcript_4054.nic	chr1	-	1587	10	NIC	ENSG00000121310.17	novel	1606	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	31.6910237710037	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920774	True	NA	-18	True	ATTAAA	-6	NA	52921754	52896231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52912022_52913894_52914096_52921552
transcript_40542.known	chr17	+	1980	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_7	75.093275331417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592219	True	NA	-1	True	AATAAA	-5	NA	42609640	42615224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_40544.known	chr17	-	3749	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	17.4839211849059	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGAGACTGATGCTG	-42604951	True	NA	-10	True	AATAAA	-17	NA	42609374	42579514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
transcript_40556.known	chr17	+	1782	11	FSM	ENSG00000037042.9	ENST00000251412.8	1782	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	157.989113549004	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656197	True	NA	14	True	AATAAA	-26	NA	42659283	42667006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_40562.known	chr17	+	542	3	FSM	ENSG00000267042.1	ENST00000593139.1	542	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGGAAGGAAAG	42679944	True	NA	NA	False	NA	NA	NA	42679962	42682020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42680402_42681363_42681439_42681992
transcript_40563.nic	chr17	-	1532	9	NIC	ENSG00000108799.13	novel	2752	19	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	21	junction_8	11.2333209693305	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATGTGGCACAGACTG	-42743483	True	NA	-1	True	AATAAA	-19	NA	42745064	42718008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_40567.known	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	56.6647058484282	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42760763	False	NA	8	True	AATAAA	-18	NA	42760774	42763041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
transcript_40569.known	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	66.9842435867487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	42760618	False	NA	NA	False	NA	NA	NA	42760804	42762698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
transcript_4057.known	chr1	-	1126	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.4446661748242	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGAGTCTTGGTAT	-52920746	True	NA	-19	True	ATTAAA	-5	NA	52921726	52896232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_40570.known	chr17	+	752	4	FSM	ENSG00000131477.11	ENST00000253796.10	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	21.4009345590327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42761179	False	NA	8	True	AATAAA	-18	NA	42761226	42763041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42761359_42761833_42761900_42762354_42762464_42762596
transcript_40574.known	chr17	-	1288	4	FSM	ENSG00000197291.9	ENST00000592195.1	1288	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATGTAAGTATATACT	-42760956	False	NA	NA	False	ATTAAA	-23	NA	42761011	42758294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42759023_42759738_42759881_42760425_42760712_42760879
transcript_40577.known	chr17	+	1088	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_4	61.4576276795647	1620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	42763844	True	NA	13	True	ATTAAA	-14	NA	42773448	42779599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_40582.known	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1431	junction_1	0	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-42785819	True	NA	1	True	AATAAA	-28	NA	42798704	42797624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42798168_42798467
transcript_40592.known	chr17	-	2112	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	152.474791304894	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-42817822	True	NA	-13	True	AATAAA	-25	NA	42824263	42810133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_40593.known	chr17	-	2109	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	147.637931026163	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-42817841	True	NA	-13	True	AATAAA	-25	NA	42824282	42810133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_4060.nic	chr1	-	1530	9	NIC	ENSG00000121310.17	novel	1606	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	36.3902459458575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920774	True	NA	-18	True	ATTAAA	-6	NA	52921754	52896231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52907867_52907955_52911565_52911654_52911722_52912022_52913894_52914096_52921552
transcript_40604.known	chr17	+	3144	11	FSM	ENSG00000131467.12	ENST00000293362.7	3144	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	449.080404827465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCCTTCTGGTTTCC	42814208	True	NA	9	True	AATAAA	-22	NA	42833470	42843757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838691_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_40606.known	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_6	98.3850090206836	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	42814134	True	NA	12	True	AATAAA	-25	NA	42833396	42843760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_4061.nic	chr1	-	1140	8	NIC	ENSG00000121310.17	novel	2645	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	25.9213882218322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-52920798	True	NA	-9	True	ATTAAA	-15	NA	52921778	52896222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_4062.nic	chr1	-	1122	8	NIC	ENSG00000121310.17	novel	1126	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	28.2373323594052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920798	True	NA	-18	True	ATTAAA	-6	NA	52921778	52896231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_40624.known	chr17	+	3366	10	FSM	ENSG00000131467.12	ENST00000541124.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	474.437210457471	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCCTTCTGGTTTCCA	42833070	True	NA	10	True	AATAAA	-23	NA	42833141	42843758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_40635.nic	chr17	-	1923	10	NIC	ENSG00000126581.13	novel	2109	12	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	195.60434997309	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCAGGGGTGCACTGTT	-42817862	True	NA	-16	True	AATAAA	-22	NA	42824303	42810136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42810929_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_40640.known	chr17	+	826	9	FSM	ENSG00000131467.12	ENST00000592169.2	826	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	488.381190772126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAGTAATCACACCTC	42814233	True	NA	-38	True	NA	NA	NA	42833495	42841671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_40662.known	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_11	34.5739117240272	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42960876	True	NA	-12	True	AATAAA	-17	NA	42964454	42950525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_40663.nic	chr17	-	1308	12	NIC	ENSG00000266967.7	novel	1320	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	92.9623579735368	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42960905	True	NA	-12	True	AATAAA	-17	NA	42964483	42950525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964442
transcript_40676.nic	chr17	-	1292	11	NIC	ENSG00000266967.7	novel	1320	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_2	88.1254219848053	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42960903	True	NA	-12	True	AATAAA	-17	NA	42964481	42950525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42950729_42951799_42951895_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_4069.known	chr1	+	2759	16	FSM	ENSG00000116171.19	ENST00000371514.8	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	344.763429357324	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTGGACATAATCAC	52926774	True	NA	102	True	AATAAA	-30	NA	52927275	53051698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_40705.known	chr17	-	983	6	FSM	ENSG00000266967.7	ENST00000441280.7	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	30.482782025268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGTCATGGAACTG	-42960865	True	NA	NA	False	NA	NA	NA	42964443	42955886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_40707.known	chr17	+	585	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	5455.2643382333	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	42998198	True	NA	53	True	ATTAAA	-8	NA	42998272	43002949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_4071.known	chr1	+	1889	15	FSM	ENSG00000116171.19	ENST00000371509.8	1889	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	353.116706151472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTAGGAACAGTAA	52926784	True	NA	NA	False	NA	NA	NA	52927285	53050970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_40713.known	chr17	+	505	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	7329	junction_1	2490.62265056351	21578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913290	True	NA	63	True	ATTAAA	-18	NA	42998418	43002959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_40714.known	chr17	+	318	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	4315.96990515715	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913307	True	NA	63	True	ATTAAA	-18	NA	42998435	43002959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
transcript_40715.known	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	10738	junction_2	1669	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	42913290	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43000103_43002672_43002784_43002871
transcript_40716.known	chr17	+	730	4	FSM	ENSG00000131469.15	ENST00000589913.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	10738	junction_3	1362.85680343412	5894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913342	True	NA	63	True	ATTAAA	-18	NA	42998470	43002959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998832_42999932_43000103_43002672_43002784_43002871
transcript_40717.known	chr17	+	1182	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	5.01386965216377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006652	False	NA	5	True	AGTAAA	-17	NA	43006783	43014456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
transcript_40718.known	chr17	+	1232	7	FSM	ENSG00000068079.8	ENST00000438323.2	1232	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	4.74926894959167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006608	True	NA	5	True	AGTAAA	-17	NA	43006739	43014456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013380_43013475_43013663_43013775_43013883_43014107
transcript_40719.nnic	chr17	-	2396	6	NNC	ENSG00000108828.16	novel	2699	6	NA	NA	-2563	0	intron_retention	TRUE	canonical	2	2	junction_5	568.450877385197	92	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-43027643	True	NA	-20	True	AATAAA	-14	NA	43027686	43014606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43027539
transcript_4072.known	chr1	+	742	4	FSM	ENSG00000116171.19	ENST00000533119.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	389.149785501104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCAGTTTAAGAGTTTT	53009283	True	NA	NA	False	AAAAAG	-45	NA	53014965	53051062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53015044_53038916_53039047_53047857_53047938_53050608
transcript_40725.nnic	chr17	+	801	6	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	215	-2813	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	338.63750530619	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	43025401	False	NA	27	True	AATAAA	-19	NA	43025455	43029228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431_43028677_43029089
transcript_40729.known	chr17	+	4162	5	FSM	ENSG00000108830.10	ENST00000587250.4	4162	5	0	0	0	0	multi-exon	TRUE	canonical	3	537	junction_1	102.637712367336	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCAGAGTTTCTGTG	43020607	True	NA	12	True	AATAAA	-19	NA	43025230	43032041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_40732.nnic	chr17	+	1214	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	215	-2813	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	295.146044357704	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	43025401	False	NA	27	True	AATAAA	-19	NA	43025455	43029228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_40739.known	chr17	-	2379	23	FSM	ENSG00000012048.23	ENST00000491747.6	2379	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	22.9440570097382	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCAGCCACAGGTAC	-43122637	True	NA	NA	False	NA	NA	NA	43125356	43045677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082576_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_40741.known	chr17	-	4497	10	FSM	ENSG00000012048.23	ENST00000354071.7	4497	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	16.4166431659918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAAGTTGCAGCGT	-43125240	False	NA	NA	False	AGTAAA	-27	NA	43125315	43091097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_40743.nic	chr17	-	967	6	NIC	ENSG00000012048.23	novel	558	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	25.2459897805572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCCTGAACATCTAAAAG	-43122627	True	NA	NA	False	AAAAAG	-9	NA	43125346	43104224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43124736
transcript_40744.known	chr17	-	2108	10	FSM	ENSG00000012048.23	ENST00000470026.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	22.7303028283098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAAAAAAAGTACAA	-43122604	True	NA	NA	False	NA	NA	NA	43125323	43093583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125181
transcript_40745.known	chr17	-	7270	24	FSM	ENSG00000012048.23	ENST00000471181.7	7270	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	27.2376643486229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-43125408	True	NA	-5	True	AATAAA	-21	NA	43125483	43044294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43079333_43079400_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_40748.known	chr17	+	4613	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_11	20.9666401695646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	43167003	True	NA	15	True	AATAAA	-19	NA	43171213	43211688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
transcript_4075.known	chr1	-	1102	8	FSM	ENSG00000162384.14	ENST00000294360.5	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	45.6499547354314	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-53216510	True	NA	0	True	ATTAAA	-18	NA	53220634	53214098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260_53220345_53220569
transcript_40752.nic	chr17	+	2726	17	ISM	ENSG00000188554.15	ENST00000589872.1	3097	21	-34	9094	-5	4643	5prime_fragment	FALSE	canonical	3	139	junction_11	23.4053112295052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTGGATTCTGGATT	43166998	True	NA	2	True	AATAAA	-15	NA	43171208	43200763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166
transcript_40757.known	chr17	+	978	4	FSM	ENSG00000198496.12	ENST00000356906.7	978	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	10.4243305140746	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	43124770	True	NA	13	True	AATAAA	-22	NA	43125639	43140333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815
transcript_40760.known	chr17	-	2406	2	FSM	ENSG00000267002.4	ENST00000634503.1	2406	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTTATCATCTTCGA	-43170375	False	NA	NA	False	AAAAAG	-15	NA	43170441	43165759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43167850_43170125
transcript_40763.known	chr17	-	191	1	FSM	ENSG00000277903.1	ENST00000611544.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43271559	43271368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43271400_43271600
transcript_40764.known	chr17	-	191	1	FSM	ENSG00000274452.1	ENST00000619225.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43290481	43290290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43290300_43290500
transcript_40765.known	chr17	-	191	1	FSM	ENSG00000275219.1	ENST00000620268.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43296615	43296424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43296400_43296600
transcript_40766.known	chr17	-	191	1	FSM	ENSG00000273709.1	ENST00000616535.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-43241346	False	NA	NA	False	NA	NA	NA	43241370	43241179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43241200_43241400
transcript_40767.known	chr17	-	191	1	FSM	ENSG00000278048.1	ENST00000613119.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43252019	43251828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43251800_43252000
transcript_40768.known	chr17	-	1083	5	FSM	ENSG00000188825.15	ENST00000658754.1	1083	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.54950975679639	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATAGTTACCATCTCAT	NA	False	NA	NA	False	AATAAA	-27	NA	43388350	43371076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43371427_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_40770.known	chr17	-	1321	1	FSM	ENSG00000279602.1	ENST00000624705.1	1321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCGGACTTGCCCTGAGT	-43360863	True	NA	NA	False	AATAAA	-17	NA	43361361	43360040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43360000_43361400
transcript_40771.known	chr17	+	1578	2	FSM	ENSG00000175906.5	ENST00000320033.5	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTCTGTAGTTTT	43398403	True	NA	4	True	NA	NA	NA	43398992	43401137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43399094_43399660
transcript_40772.known	chr17	-	1727	13	FSM	ENSG00000175832.13	ENST00000591713.5	1727	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	309.745986881007	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAATGGCAAGTCTAGA	-43545863	False	NA	NA	False	NA	NA	NA	43545899	43528336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43545860
transcript_40774.nic	chr17	-	2274	11	ISM	ENSG00000175832.13	ENST00000393664.6	2182	12	100	-2	100	0	intron_retention	FALSE	canonical	3	1007	junction_6	101.525563283343	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43545535	False	NA	-4	True	AATAAA	-20	NA	43545571	43527843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273
transcript_40779.nnic	chr17	-	2075	10	NIC	ENSG00000175832.13	novel	2147	12	NA	NA	-18	0	combination_of_known_splicesites	TRUE	canonical	3	55	junction_9	353.683404497983	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43545384	False	3846	-4	True	AATAAA	-20	NA	43545420	43527843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43545273
transcript_40785.nic	chr17	-	1292	4	NIC	ENSG00000108861.9	novel	1019	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	71.4438396380137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGTATTGTTTTTTT	-43775069	True	NA	NA	False	AATAAA	-11	NA	43778977	43766130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_40786.nic	chr17	-	928	4	NIC	ENSG00000108861.9	novel	4095	3	NA	NA	0	17	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	71.4438396380137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGATCTTCAATATGAAG	-43775069	True	NA	NA	False	AAAAAG	-1	NA	43778977	43766494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_40787.known	chr17	-	4095	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	16	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-43775069	True	NA	NA	False	AATAAA	-17	NA	43778977	43766124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43769815_43774711_43774939_43778799
transcript_40788.known	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.29197089312436	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-43832625	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_40792.known	chr17	+	1459	2	FSM	ENSG00000161649.13	ENST00000588884.1	1459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCATCGAACCACATTGA	NA	False	NA	NA	False	AATAAA	-21	NA	43847152	43849909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43847260_43848557
transcript_40793.known	chr17	-	4206	12	FSM	ENSG00000108852.16	ENST00000377184.7	4206	12	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	15.8713838856692	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTCTGCTTTTCTTT	-43896136	True	NA	-1	True	ATTAAA	-16	NA	43900598	43875356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_40795.nnic	chr17	-	450	3	NNC	ENSG00000282199.1	novel	445	2	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTGTGAGTTATCA	-43917318	False	NA	NA	False	ATTAAA	-17	NA	43917342	43914431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_43914771_43917137_43917199_43917292
transcript_40796.nnic	chr17	-	1080	2	NNC	ENSG00000282199.1	novel	445	2	NA	NA	-479	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTGTGAGTTATCA	-43917854	True	NA	NA	False	ATTAAA	-17	NA	43917878	43914431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_43914771_43917137
transcript_40797.known	chr17	-	445	2	FSM	ENSG00000282199.1	ENST00000591374.5	445	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTTGTGAGTTATC	-43917375	False	NA	NA	False	ATTAAA	-16	NA	43917399	43914432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43914771_43917292
transcript_40798.known	chr17	+	434	2	FSM	ENSG00000261514.2	ENST00000565120.2	544	2	106	4	106	-4	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGACTTCTGTGGGCC	43938348	False	NA	17	True	AATAAA	-17	NA	43938362	43938959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43938398_43938560
transcript_40799.known	chr17	-	1053	7	FSM	ENSG00000131096.11	ENST00000360085.6	1053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.79271573232759	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATGTATGCCTTTGTAT	-44004457	False	NA	-3	True	AATAAA	-19	NA	44004469	43952737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43952981_43953108_43953190_43953295_43953484_43953849_43953976_43957937_43958029_43966287_43966533_44004390
transcript_40800.known	chr17	+	2114	7	FSM	ENSG00000161653.11	ENST00000293404.8	2114	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	12.4632793972266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCTTACACTTGAAAGA	44004450	True	NA	20	True	ATTAAA	-21	NA	44004621	44009068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44005090_44005636_44005912_44006023_44006238_44006528_44006710_44007322_44007495_44007590_44007774_44008447
transcript_40802.nic	chr17	+	1210	3	ISM	ENSG00000161653.11	ENST00000592915.1	1955	4	1041	-5	1041	0	3prime_fragment	FALSE	canonical	3	44	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCTTACACTTGAAAGA	44007039	True	NA	20	True	ATTAAA	-21	NA	44007088	44009068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_44007495_44007590_44007774_44008447
transcript_40804.known	chr17	-	1525	4	FSM	ENSG00000091947.10	ENST00000206380.8	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	3.68178700572909	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTGCTTTTCTGTT	-44012932	True	NA	-3	True	AATAAA	-16	NA	44014963	44011187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44012237_44013008_44013156_44014356_44014538_44014815
transcript_40817.known	chr17	-	2552	5	FSM	ENSG00000161654.10	ENST00000293406.8	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_1	61.5589148702282	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-44049403	True	NA	-1	True	AGTAAA	-18	NA	44066671	44034327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_4082.nnic	chr1	-	1063	7	NIC	ENSG00000162384.14	novel	1102	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	142.154161231937	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-53216528	True	NA	0	True	ATTAAA	-18	NA	53220652	53214098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53220260_53220345_53220569
transcript_40837.known	chr17	+	1573	6	FSM	ENSG00000141349.9	ENST00000269097.9	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_4	76.5819822151399	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	44070708	True	NA	24	True	AATAAA	-18	NA	44070734	44076344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_40840.known	chr17	+	851	5	FSM	ENSG00000141349.9	ENST00000590639.1	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	47.8611272328599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGAAATGGCCAGAAGA	44071147	False	NA	NA	False	NA	NA	NA	44071166	44075832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075452_44075679
transcript_40842.nic	chr17	+	1323	5	NIC	ENSG00000141349.9	novel	1573	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	375.787423286091	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	44057330	True	NA	24	True	AATAAA	-18	NA	44070865	44076344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44071184_44074159_44074267_44074679_44074771_44075309_44075452_44075679
transcript_40852.known	chr17	+	2698	10	FSM	ENSG00000125319.15	ENST00000585683.6	2698	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	28.6239992547047	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140503	True	NA	4	True	AATAAA	-14	NA	44141929	44162476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_40853.nic	chr17	+	2614	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	42.2640509180083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140478	True	NA	4	True	AATAAA	-14	NA	44141904	44162476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_40858.nic	chr17	+	2498	8	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_3	38.9594242089623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140478	True	NA	4	True	AATAAA	-14	NA	44141904	44162476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_40859.known	chr17	+	2725	10	FSM	ENSG00000125319.15	ENST00000319977.8	2725	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	41.9349878964635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140479	True	NA	4	True	AATAAA	-14	NA	44141905	44162476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154552_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_40860.known	chr17	-	4795	21	FSM	ENSG00000108312.15	ENST00000436088.6	4795	21	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_20	112.669472351653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-44219555	False	NA	-13	True	AATAAA	-13	NA	44219675	44205039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_40862.known	chr17	-	2570	20	FSM	ENSG00000108312.15	ENST00000529383.5	2570	20	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_13	92.8229184136412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCACCCCAGGGCA	-44218382	False	725	NA	False	NA	NA	NA	44218502	44207239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171
transcript_40863.known	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_19	98.5191461628897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	-44219630	False	NA	NA	False	NA	NA	NA	44219750	44207115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_40865.known	chr17	-	2459	19	FSM	ENSG00000108312.15	ENST00000526094.5	2459	19	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_13	68.855032002743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCACCCCAGGGCA	-44218382	False	725	NA	False	NA	NA	NA	44218502	44207239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171
transcript_40878.known	chr17	+	2418	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	40	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44185789	True	NA	9	True	AATAAA	-17	NA	44187205	44191726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187744_44188934_44189589_44190500
transcript_40879.known	chr17	+	1921	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	47	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	44186740	True	NA	13	True	AATAAA	-21	NA	44186985	44191730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187110_44189021_44189589_44190500
transcript_40880.known	chr17	+	1918	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGTGGTCCTGCAG	44185845	True	NA	-5	True	AATAAA	-3	NA	44187261	44191712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187401_44189021_44189589_44190500
transcript_40881.nic	chr17	+	2011	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	38	junction_1	34.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCCTCTTTCTGTGA	44185796	True	NA	8	True	AATAAA	-16	NA	44187212	44191725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44187432_44189021_44189589_44190500
transcript_40884.known	chr17	+	746	2	FSM	ENSG00000108309.14	ENST00000588564.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	44316429	False	NA	11	True	AATAAA	-15	NA	44316554	44318670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44316726_44318095
transcript_40887.known	chr17	-	1542	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_11	808.774095276353	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAACTTCTGCCTG	-44298510	True	NA	NA	False	NA	NA	NA	44324809	44319641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
transcript_40891.known	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_8	627.020726719251	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-44298524	True	NA	NA	False	NA	NA	NA	44324823	44319627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_40894.known	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	107.422161742042	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	44330720	True	NA	21	True	AATAAA	-19	NA	44345301	44353106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_40895.nic	chr17	+	2428	13	NIC	ENSG00000030582.18	novel	2130	13	NA	NA	-7	0	intron_retention	FALSE	canonical	3	151	junction_1	210.590175986968	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	44330693	True	NA	21	True	AATAAA	-19	NA	44345274	44353106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_40912.known	chr17	-	496	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375804	False	380	-36	True	AATAAA	-16	NA	44376184	44372180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44372424_44375832_44375986_44376084
transcript_40913.nic	chr17	-	496	2	ISM	ENSG00000005961.19	ENST00000648408.1	2618	25	10430	0	1274	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	-44374736	False	NA	-35	True	AATAAA	-17	NA	44374910	44372179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_44372424_44374658
transcript_40914.known	chr17	-	4713	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	41.0670183967621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGCTTTCAGT	-44498748	True	NA	NA	False	NA	NA	NA	44503404	44397415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
transcript_40915.known	chr17	-	6832	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_2	13.5631553730491	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAGAGTCTGTCGTAA	-44498750	True	NA	-4	True	AATAAA	-18	NA	44503406	44395280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_40917.nnic	chr17	-	2198	7	NIC	ENSG00000186566.13	novel	6832	8	NA	NA	-175	1296	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	39.4732680289951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCACAAAAAATCCAGCA	-44503589	False	NA	NA	False	AAAAAG	-6	NA	44503605	44400040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44474828_44474904_44503325
transcript_40918.nic	chr17	-	628	7	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-28	10699	-4	-4572	5prime_fragment	FALSE	canonical	3	84	junction_1	14.6334851928339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAAAGCCCTTCGGCG	-44503418	False	444	NA	False	NA	NA	NA	44503434	44405979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_40919.known	chr17	-	650	3	FSM	ENSG00000186566.13	ENST00000592154.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	62.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGGCGCCTGTAGTC	-44503414	False	444	NA	False	NA	NA	NA	44503430	44473289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44473760_44474828_44474904_44503325
transcript_40920.known	chr17	-	565	2	FSM	ENSG00000186566.13	ENST00000588554.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTTATATTAAAAACAT	-44498750	True	NA	NA	False	NA	NA	NA	44503406	44474419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44474904_44503325
transcript_40922.known	chr17	-	2114	5	FSM	ENSG00000180329.14	ENST00000315286.13	2114	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	130.616566713415	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-44684900	True	NA	-9	True	AATAAA	-40	NA	44689776	44677439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44679044_44680584_44680644_44682002_44682139_44683871_44683960_44689549
transcript_40924.known	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	148.041285532861	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-44684903	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
transcript_40925.known	chr17	-	692	3	FSM	ENSG00000180329.14	ENST00000592333.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACAATATAGCTGTA	-44684869	True	NA	NA	False	AAAACA	-38	NA	44689745	44681730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44682139_44683871_44683960_44689549
transcript_40930.known	chr17	+	2998	12	FSM	ENSG00000161692.18	ENST00000526924.5	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.8331258904423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCACTTTTTCTT	44705792	True	NA	NA	False	NA	NA	NA	44708697	44750239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_40937.known	chr17	+	836	5	FSM	ENSG00000161692.18	ENST00000528766.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.64736790015417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCTCCAACTCTG	44705750	True	NA	NA	False	NA	NA	NA	44708655	44731218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_40941.known	chr17	-	586	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	76	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAGCAGACAAGAAGG	-44827744	True	NA	-132	True	NA	NA	NA	44830816	44805506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44805838_44807393_44807470_44830637
transcript_40943.known	chr17	-	7566	2	FSM	ENSG00000182963.11	ENST00000590758.3	7566	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTTTGTGTTTCCTT	-44827741	True	NA	-6	True	AATACA	-15	NA	44830813	44798447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44805838_44830637
transcript_40944.known	chr17	-	4326	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_16	81.9882724391623	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCTGTTGCATGAT	-44882030	True	NA	-5	True	NA	NA	NA	44899445	44849947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_40945.known	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_23	204.343621140191	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-44882016	True	NA	-62	True	NA	NA	NA	44899431	44850865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_40948.known	chr17	-	3045	27	FSM	ENSG00000108883.13	ENST00000402521.7	3045	27	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_26	210.903775136587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTGAGAGAGGAGCAT	-44882030	True	NA	NA	False	NA	NA	NA	44899445	44851119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44899368
transcript_40954.known	chr17	+	921	4	FSM	ENSG00000167131.17	ENST00000410006.6	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGCAGGACCATAATA	44899393	True	NA	-84	True	NA	NA	NA	44899711	44902882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44899830_44900989_44901142_44901519_44901653_44902364
transcript_40959.known	chr17	+	3397	4	FSM	ENSG00000214447.5	ENST00000331733.4	3397	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	44899455	True	NA	8	True	NA	NA	NA	44899773	44905390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
transcript_40962.known	chr17	-	594	4	FSM	ENSG00000131095.14	ENST00000585543.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCTTGCTGCCCTAGG	-44911417	True	NA	NA	False	NA	NA	NA	44911515	44907204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44907389_44908063_44908150_44910614_44910659_44911235
transcript_40966.known	chr17	+	4881	12	FSM	ENSG00000136448.13	ENST00000258960.7	4881	12	0	0	0	0	multi-exon	FALSE	canonical	2	498	junction_8	77.3345207470348	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCCTGGTATTCCT	45047821	True	NA	NA	False	AATAAA	-19	NA	45061316	45109016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_4097.known	chr1	-	841	2	FSM	ENSG00000162384.14	ENST00000474227.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACCAAGCAGAGTGG	-53216476	True	NA	NA	False	NA	NA	NA	53220600	53219534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53220345_53220569
transcript_40970.known	chr17	+	1328	8	FSM	ENSG00000136448.13	ENST00000590310.2	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_5	29.119738729485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTAGTGAACCTTCA	45047805	True	NA	NA	False	AGTAAA	-19	NA	45061300	45099819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404
transcript_40971.nic	chr17	+	436	2	ISM	ENSG00000136448.13	ENST00000585561.5	807	7	-252	15544	-189	-15544	5prime_fragment	FALSE	canonical	3	698	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAAAAGGCAGTG	45061058	False	NA	55	True	AAAAAG	-21	NA	45061081	45081700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_45061461_45081643
transcript_40972.nnic	chr17	-	2065	6	NIC	ENSG00000172992.13	novel	1957	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	68.9190829886759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGATTCCCAGACTTGGC	-45047273	True	NA	-13	True	AATAAA	-30	NA	45051610	45023343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_45024725_45030091_45030180_45033934_45034043_45034186_45034391_45034773_45035000_45051552
transcript_40973.known	chr17	-	1000	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	13	1158	-1	-760	multi-exon	FALSE	canonical	0	0	junction_4	68.521438251105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGGCTCGCTGCCAT	-45047282	True	NA	NA	False	NA	NA	NA	45051619	45024501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
transcript_40974.known	chr17	-	990	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	967	5	-569	multi-exon	FALSE	canonical	3	49	junction_4	47.5447157947127	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	-45047273	True	NA	NA	False	NA	NA	NA	45051610	45024310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
transcript_40975.known	chr17	-	2030	5	FSM	ENSG00000172992.13	ENST00000342350.10	2149	5	113	6	8	0	multi-exon	FALSE	canonical	3	28	junction_4	56.5127198071372	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGATTCCCAGACTTGGC	-45059346	True	NA	-13	True	AATAAA	-30	NA	45061018	45023343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45060887
transcript_40979.known	chr17	-	2122	5	FSM	ENSG00000172992.13	ENST00000310604.9	2112	5	-8	-2	4	0	multi-exon	FALSE	canonical	1	2	junction_4	67.6623048676292	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGATTCCCAGACTTG	-45059437	True	NA	-15	True	AATAAA	-28	NA	45061109	45023345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035003_45060887
transcript_4098.known	chr1	-	656	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_2	88.03550420143	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAACTCTTCTCAATT	-53223547	True	NA	-16	True	AATAAA	-44	NA	53238518	53226899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
transcript_40982.known	chr17	+	1579	10	FSM	ENSG00000181513.15	ENST00000586346.5	1579	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	14.2473735937887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATCGGGTCTCAGCCCC	45134433	True	NA	NA	False	NA	NA	NA	45135646	45143850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_40984.known	chr17	+	1827	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.09663853432741	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45134473	True	NA	12	True	AATAAA	-13	NA	45135686	45144176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_40987.known	chr17	+	1453	10	FSM	ENSG00000181513.15	ENST00000376955.8	1453	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.5255862921022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGACCTTGCTTTCCT	45134480	True	NA	2	True	NA	NA	NA	45135693	45142959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_40988.known	chr17	+	2026	12	FSM	ENSG00000181513.15	ENST00000431281.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.6878914781856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTCTGCTGTCTGGT	45132514	True	NA	8	True	AATAAA	-9	NA	45132599	45144172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45132664_45135340_45135597_45135841_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_40989.known	chr17	+	1986	9	FSM	ENSG00000181513.15	ENST00000398322.7	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	7.99902337788808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGGTCCCCTACGG	45134473	True	NA	17	True	AATAAA	-18	NA	45135686	45144181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_40990.known	chr17	-	1741	1	FSM	ENSG00000276728.1	ENST00000612013.1	1741	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCGTTCTTTTTATT	-45148460	False	NA	NA	False	NA	NA	NA	45148470	45146729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45146700_45148500
transcript_40991.known	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	38.1255236758206	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160917	True	NA	20	True	ATTAAA	-20	NA	45161874	45170035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
transcript_40992.known	chr17	+	1302	3	FSM	ENSG00000168517.11	ENST00000593138.6	1302	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160901	True	NA	20	True	ATTAAA	-20	NA	45161077	45170035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161249_45162749_45162860_45169014
transcript_40993.known	chr17	+	1246	3	FSM	ENSG00000168517.11	ENST00000592695.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	41	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160959	True	NA	20	True	ATTAAA	-20	NA	45161916	45170035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45162032_45162749_45162860_45169014
transcript_40994.known	chr17	+	1176	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	49	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160937	True	NA	20	True	ATTAAA	-20	NA	45161894	45170035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161940_45162749_45162860_45169014
transcript_40995.known	chr17	+	1345	3	FSM	ENSG00000168517.11	ENST00000585340.2	1345	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160710	False	NA	20	True	ATTAAA	-20	NA	45160729	45170035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45160944_45162749_45162860_45169014
transcript_40996.known	chr17	+	1323	4	FSM	ENSG00000168517.11	ENST00000591070.6	1323	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	44.2743969153982	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160938	True	NA	20	True	ATTAAA	-20	NA	45161895	45170035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161940_45162487_45162636_45162749_45162860_45169014
transcript_40997.nic	chr17	-	594	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-11	2081	-11	0	5prime_fragment	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	-45248183	True	NA	-36	True	TATAAA	-21	NA	45248350	45247266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_40998.nic	chr17	-	490	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-11	2185	-11	10	5prime_fragment	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGGAAACAGGCTGCGGG	-45248183	True	NA	-6	True	AGTAAA	-10	NA	45248350	45247370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_40999.known	chr17	-	393	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	-45247676	False	NA	-36	True	TATAAA	-21	NA	45247843	45247266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45247517_45247700
transcript_41.known	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00111_+_0_1000
transcript_410.known	chr1	-	798	4	FSM	ENSG00000175756.14	ENST00000321751.9	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	2010.08943969057	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCGGGTCTGGAGCTC	-1344469	True	NA	-25	True	AATAAA	-20	NA	1375169	1373731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375074
transcript_41009.known	chr17	+	546	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	31.7909840468436	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGAAGGCCTGAACTGG	45614507	True	NA	NA	False	NA	NA	NA	45620327	45636394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
transcript_4101.known	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	479.704307070744	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	-53223528	True	NA	-42	True	AATAAA	-18	NA	53238499	53226925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
transcript_41010.known	chr17	+	9678	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_3	82.6599459633665	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTGCCAGAGAATTT	45614519	True	NA	NA	False	AATAAA	-19	NA	45620339	45655156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
transcript_41012.known	chr17	+	1107	9	FSM	ENSG00000186868.17	ENST00000334239.12	1107	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.278719262151	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGTCAATAATTGTGGAG	45894657	False	NA	NA	False	NA	NA	NA	45894667	46024183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45894687_45962320_45962471_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
transcript_41013.nic	chr17	-	2135	3	ISM	ENSG00000120071.15	ENST00000574655.6	1681	5	-14	17373	4	0	5prime_fragment	FALSE	canonical	3	31	junction_2	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTCCTATTAAAAAAAAAA	-46223264	True	NA	NA	False	AATACA	-38	NA	46225385	46170276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_46172233_46223670_46223805_46225340
transcript_41014.known	chr17	+	517	2	FSM	ENSG00000214401.5	ENST00000398275.5	527	2	8	2	8	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGAGTTCTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	46193575	46196721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46193739_46196367
transcript_41015.known	chr17	+	483	1	FSM	ENSG00000261575.3	ENST00000570002.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAACTGAGCTGAATG	NA	False	NA	9	True	AATAAA	-24	NA	46267036	46267519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46267000_46267500
transcript_41022.known	chr17	-	1140	5	FSM	ENSG00000228696.10	ENST00000570618.5	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	136.208250484323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAGCAAGAAACA	NA	False	NA	NA	False	ATTAAA	-10	NA	46361764	46274783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46275419_46299525_46299666_46352819_46352931_46358249_46358415_46361675
transcript_41025.known	chr17	-	2181	5	FSM	ENSG00000228696.10	ENST00000656849.1	2181	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	137.281417169259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGACTCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	46361750	46285275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46286966_46299525_46299666_46352819_46352931_46358249_46358415_46361675
transcript_41026.known	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	93.6919820475584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	46361718	46330452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_41029.nnic	chr17	-	2128	4	NIC	ENSG00000228696.10	novel	565	5	NA	NA	-5	3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	131.881259725052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCATCCAGTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	46361755	46309503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_46311276_46352819_46352931_46358249_46358415_46361675
transcript_41030.known	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	58.7669597270061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
transcript_41033.known	chr17	-	491	4	FSM	ENSG00000228696.10	ENST00000571246.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	134.687292149878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	46361732	46334679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46334838_46352819_46352931_46358249_46358415_46361675
transcript_41035.known	chr17	+	5669	15	FSM	ENSG00000238083.8	ENST00000576629.5	5669	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	13.0800127941022	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGTGATTCCGATG	NA	False	NA	NA	False	AATAAA	-22	NA	46511510	46555650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46511609_46512315_46515322_46517361_46517434_46520211_46520284_46523083_46523156_46523803_46523885_46540175_46540248_46540806_46540882_46546254_46546374_46548311_46549844_46550414_46550520_46553399_46553450_46555151_46555207_46555284_46555425_46555530
transcript_41041.nnic	chr17	-	996	6	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	0	12335	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	120.930723970379	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGGTGTTCTATGGC	-46579650	False	NA	NA	False	AATAAA	-27	NA	46579671	46504366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46504610_46517093_46517234_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41043.nnic	chr17	-	1016	6	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-31	8023	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	127.973434743309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAATCATAACATGATT	-46579701	False	NA	NA	False	AATAAA	-18	NA	46579722	46508678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46508891_46517093_46517234_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41045.nnic	chr17	-	1122	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	-31	16907	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	134.963884057921	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAGACAGAAATTGCC	-46579701	False	NA	NA	False	TATAAA	-14	NA	46579722	46499794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46500379_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_41047.nnic	chr17	-	781	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	-31	12335	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	123.103614894121	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGGTGTTCTATGGC	-46579701	False	NA	NA	False	AATAAA	-27	NA	46579722	46504366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46504610_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_41048.nnic	chr17	-	750	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	-31	8023	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	132.301502259045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAATCATAACATGATT	-46579701	False	NA	NA	False	AATAAA	-18	NA	46579722	46508678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46508891_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_41049.known	chr17	-	798	5	FSM	ENSG00000185829.18	ENST00000445552.6	798	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	135.263400445205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATCTCTCTTGCTTGGA	-46579649	False	NA	NA	False	AATAAA	-22	NA	46579670	46516701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46517014_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_41051.nnic	chr17	-	1961	5	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-31	1043	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	96.8823384317286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGTTTTGAAAAATA	-46579701	False	NA	NA	False	NA	NA	NA	46579722	46547163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46548461_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41052.nnic	chr17	-	1546	5	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-31	628	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	96.8823384317286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTCTGGATAAACATT	-46579701	False	NA	NA	False	AATACA	-22	NA	46579722	46547578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46548461_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41054.known	chr17	-	491	4	FSM	ENSG00000185829.18	ENST00000570550.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	137.995974176383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	-46579636	False	NA	NA	False	AATAAA	-18	NA	46579657	46552532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46552691_46570758_46570870_46576174_46576340_46579600
transcript_41055.known	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	61.4220373047546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	-46579670	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41058.known	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_15	33.1012084371553	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	12	True	AATAAA	-20	NA	46590668	46757464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_41060.nic	chr17	+	2152	15	ISM	ENSG00000073969.18	ENST00000398238.8	3983	21	32	43162	32	-37281	5prime_fragment	FALSE	canonical	3	220	junction_7	28.0149377064072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGATTTTTTAAAGTTC	NA	False	NA	2	True	AATAAA	-14	NA	46590700	46714302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852
transcript_41063.known	chr17	-	586	1	FSM	ENSG00000213326.4	ENST00000484240.1	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATGGCTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	46722167	46721581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46721600_46722200
transcript_41064.known	chr17	-	3287	5	FSM	ENSG00000108379.10	ENST00000225512.6	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	2.69258240356725	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	NA	False	NA	-13	True	ATTAAA	-23	NA	46818692	46762505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46764622_46768311_46768800_46769782_46770049_46773667_46773910_46818517
transcript_41065.nic	chr17	+	974	6	ISM	ENSG00000262633.2	ENST00000639822.1	1564	8	-32	82932	-5	-80154	5prime_fragment	FALSE	canonical	3	40	junction_4	134.429758610213	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	46917715	True	NA	19	True	ATTAAA	-19	NA	46923127	46967000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598_46938705_46966533
transcript_41067.known	chr17	+	1245	7	FSM	ENSG00000108433.17	ENST00000225567.9	1245	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	120.117188149277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGGACATTTACTT	46917707	True	NA	NA	False	TTTAAA	-36	NA	46923119	46941143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940554
transcript_41069.known	chr17	+	1115	7	FSM	ENSG00000108433.17	ENST00000573224.2	1115	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	85.479854676734	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	46917715	True	NA	19	True	ATTAAA	-19	NA	46923127	46967000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
transcript_4107.known	chr1	-	4552	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	0	0	0	multi-exon	TRUE	canonical	3	503	junction_9	46.8326180951595	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAGTTAATTGAAATA	-53832168	True	NA	-22	True	AATAAA	-18	NA	53838296	53765477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_41071.known	chr17	+	2683	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	122.724080766572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	46917751	True	NA	-3	True	NA	NA	NA	46923163	46940779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_41079.known	chr17	+	3574	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	119.25166665502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	46917733	True	NA	NA	False	TTTAAA	-42	NA	46923145	46941600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_41082.known	chr17	+	885	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.168691763099	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	46917785	True	NA	NA	False	NA	NA	NA	46923197	46935586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
transcript_41084.known	chr17	+	3808	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	157.356879417457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	46917725	True	NA	8	True	AATAAA	-20	NA	46923137	46942019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
transcript_41088.nnic	chr17	+	885	5	NIC	ENSG00000108433.17	novel	1115	7	NA	NA	-6	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	148.641136634513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	46917698	True	NA	19	True	ATTAAA	-19	NA	46923110	46967000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46966533
transcript_41089.known	chr17	+	1425	4	FSM	ENSG00000108433.17	ENST00000640007.1	1425	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	158.175711016438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTCTTCCTGGTCAT	46917748	True	NA	4	True	AATAAA	-16	NA	46923160	46933262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931104_46931208_46932066
transcript_41095.known	chr17	-	2579	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	23.2893765852243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTCTGTATACTGAGT	-47186817	True	NA	NA	False	NA	NA	NA	47189224	47120879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41097.nic	chr17	-	2965	19	NIC	ENSG00000004897.12	novel	5830	19	NA	NA	-14	169	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	40.8830385307425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTTGATTGCCAAGG	-47186902	True	NA	-25	True	AATAAA	-16	NA	47189309	47120440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47156984_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41098.known	chr17	-	5830	19	FSM	ENSG00000004897.12	ENST00000066544.8	5830	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	29.411931735183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATTTTTAGAATACCT	-47186888	True	NA	-3	True	AATAAA	-18	NA	47189295	47117702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41099.known	chr17	-	3177	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	42.6695962535907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGATCATTGTTGTCTT	-47186769	False	NA	-6	True	NA	NA	NA	47189176	47120254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41105.nic	chr17	-	1316	11	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-85	21548	-14	0	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9673215328761	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAATGAAGTT	-47186902	True	NA	-33	True	NA	NA	NA	47189309	47142427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41106.nic	chr17	-	1334	11	ISM	ENSG00000004897.12	ENST00000531206.5	3177	19	-133	22173	-14	0	5prime_fragment	FALSE	canonical	2	7	junction_3	42.3277686631365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAATGAAGTT	-47186902	True	NA	-33	True	NA	NA	NA	47189309	47142427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41111.known	chr17	+	855	7	FSM	ENSG00000198336.9	ENST00000393450.5	855	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.763762615825973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTCTGTTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-39	NA	47209347	47223679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_41114.nic	chr17	+	1356	9	NIC	ENSG00000178852.16	novel	3957	25	NA	NA	-8	-12867	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	7.85712256490886	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACATCTCTTTTCCAA	47323211	True	NA	NA	False	AATAAA	-20	NA	47323946	47361771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47324075_47324453_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47361377
transcript_41115.nic	chr17	+	1371	9	NIC	ENSG00000178852.16	novel	3957	25	NA	NA	2	-12867	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	10.0863459686846	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACATCTCTTTTCCAA	47323221	True	NA	NA	False	AATAAA	-20	NA	47323956	47361771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47324100_47324453_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47361377
transcript_4112.nic	chr1	-	2394	17	NIC	ENSG00000058804.12	novel	4552	18	NA	NA	-38	-2242	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	142.407371210201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCATTGATGGCAGTC	-53836537	True	NA	-16	True	AATAAA	-18	NA	53838501	53767719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
transcript_41120.known	chr17	-	473	4	FSM	ENSG00000228782.8	ENST00000573318.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	69.5333652924184	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAACTCCCTACCTT	-47491861	True	NA	NA	False	AAAAAG	-41	NA	47492459	47482991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47483091_47490165_47490296_47491014_47491193_47492393
transcript_41121.nnic	chr17	-	848	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	-117	5	-117	-5	multi-exon	FALSE	canonical	3	31	junction_1	83.4159590379576	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCCTGCTTAGAACT	NA	False	NA	-5	True	AATAAA	-16	NA	47492609	47488631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
transcript_41125.known	chr17	+	4309	23	FSM	ENSG00000141279.17	ENST00000322157.9	4309	23	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	54.5553778852126	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATTCACTTTATTC	NA	False	NA	24	True	AATAAA	-20	NA	47531107	47623276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_41131.known	chr17	-	442	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	29	315	-4	-315	multi-exon	FALSE	canonical	3	13	junction_2	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	-47649363	False	41	NA	False	NA	NA	NA	47649420	47621841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
transcript_41133.nnic	chr17	-	818	3	NIC	ENSG00000263766.6	novel	786	4	NA	NA	-114	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTCTTTTAGGCTAA	-47649335	True	NA	-18	True	AATAAA	-14	NA	47649563	47621527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47622088_47636511_47636602_47649395
transcript_41134.known	chr17	-	733	3	FSM	ENSG00000263766.6	ENST00000580045.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCTGGGATTACAGGC	-47649359	False	NA	NA	False	NA	NA	NA	47649416	47626005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47626628_47636511_47636602_47649395
transcript_41135.nic	chr17	-	508	2	ISM	ENSG00000263766.6	ENST00000580045.1	733	3	-147	10256	-114	-10256	5prime_fragment	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGACTCCATGAAATTT	-47649335	True	NA	NA	False	AATAAA	-22	NA	47649563	47636261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_47636602_47649395
transcript_41136.known	chr17	-	437	4	FSM	ENSG00000263766.6	ENST00000582389.5	437	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.65383665716478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTGTATGTTTAAAAGG	-47649345	False	NA	NA	False	ATTAAA	-26	NA	47649402	47603859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47604119_47626546_47626628_47636511_47636602_47649395
transcript_41137.known	chr17	+	6058	22	FSM	ENSG00000108424.11	ENST00000290158.9	6058	22	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	183.455951573669	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	47642119	True	NA	19	True	AATAAA	-24	NA	47649918	47685505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_41141.known	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	287.255565655393	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-47827323	True	NA	-50	True	NA	NA	NA	47831534	47823489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
transcript_41143.known	chr17	-	1576	5	FSM	ENSG00000159111.13	ENST00000421763.5	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	256.321453452496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACCCAGAAGTGGGTCC	-47827319	True	NA	NA	False	NA	NA	NA	47831530	47823582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831310
transcript_41144.known	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	51.7904431338447	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-47827330	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
transcript_41146.nic	chr17	-	1521	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	107.78606929791	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838299	True	NA	-9	True	AATAAA	-15	NA	47841275	47837691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_41147.known	chr17	-	1496	8	FSM	ENSG00000141295.14	ENST00000290216.14	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	41.3294380433559	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838297	True	NA	-9	True	AATAAA	-15	NA	47841273	47837691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_41150.nic	chr17	-	1408	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	105.335421489678	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	-47838303	True	NA	-37	True	NA	NA	NA	47841279	47837719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_41158.known	chr17	-	1779	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	44.0898703407786	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838313	True	NA	-9	True	AATAAA	-15	NA	47841289	47837691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_41162.known	chr17	-	952	6	FSM	ENSG00000141295.14	ENST00000579856.5	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	132.739444024751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGACACCAGGCAGCCC	-47838289	True	NA	NA	False	NA	NA	NA	47841265	47838312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840669_47840844_47841207
transcript_41166.known	chr17	-	1745	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	25.0094426611674	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	-47838197	True	NA	-24	True	NA	NA	NA	47841173	47837706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_41168.known	chr17	-	522	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	25	10	4	0	multi-exon	FALSE	canonical	3	27	junction_1	1.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCATAACTGGTGC	-47895518	True	NA	NA	False	ATTAAA	-43	NA	47895812	47891228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47891582_47893899_47893959_47895702
transcript_41169.known	chr17	+	3026	7	FSM	ENSG00000167182.16	ENST00000376741.5	3026	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	18.8628087928483	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTTCGGCTTCCTT	47894565	True	NA	12	True	AATAAA	-28	NA	47896235	47928957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723
transcript_4117.nnic	chr1	-	2546	15	NNC	ENSG00000058804.12	novel	785	5	NA	NA	-87	-25333	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	148.560112893257	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTAGGCGGTTTTTCTTTG	-53838523	False	NA	NA	False	AATAAA	-18	NA	53838550	53790810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_53791433_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_41172.nic	chr17	+	1819	15	NIC	ENSG00000108465.15	novel	1834	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	140.954707590193	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	NA	False	NA	27	True	AATAAA	-17	NA	47970991	47981772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_41175.known	chr17	+	1834	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	93.568062118015	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	47963743	True	NA	36	True	AATAAA	-26	NA	47971112	47981781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41179.nic	chr17	+	2078	13	NIC	ENSG00000108465.15	novel	1834	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	309	junction_5	79.8225462440838	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963705	True	NA	27	True	AATAAA	-17	NA	47971074	47981772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41182.known	chr17	+	2519	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	85.905430885105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	47963755	True	NA	23	True	AATAAA	-13	NA	47971124	47981768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41184.known	chr17	+	2609	13	FSM	ENSG00000108465.15	ENST00000580287.5	2609	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	139.174850058798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963757	True	NA	27	True	AATAAA	-17	NA	47971126	47981772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_41185.nnic	chr17	+	1627	12	NIC	ENSG00000108465.15	novel	1834	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	29	junction_5	147.833947498732	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	NA	False	NA	27	True	AATAAA	-17	NA	47970991	47981772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41188.known	chr17	+	2759	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	64.3913653674489	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963734	True	NA	27	True	AATAAA	-17	NA	47971103	47981772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_4119.nic	chr1	-	1863	11	ISM	ENSG00000058804.12	ENST00000371429.4	4552	18	-254	34863	-87	18629	5prime_fragment	FALSE	canonical	3	503	junction_2	35.5894647332606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATGACTGTAGT	-53838523	False	NA	NA	False	NA	NA	NA	53838550	53800340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_41199.known	chr17	+	3417	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.7082439194738	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTCAACCCGGCCTG	47940192	True	NA	22	True	AATAAA	-23	NA	47941570	47949308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_412.known	chr1	-	1047	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-6	-288	0	multi-exon	FALSE	canonical	3	2275	junction_3	1038.92583416185	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	-1375448	False	NA	-23	True	AATAAA	-22	NA	1375495	1373729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
transcript_41202.known	chr17	-	1524	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-47957844	True	NA	NA	False	AGTAAA	-20	NA	47957883	47951966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47953264_47957656
transcript_41204.nnic	chr17	-	359	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	278	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047731	False	182	NA	False	AATAAA	-18	NA	48047772	48046880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_48046971_48047208_48047330_48047624
transcript_41205.nnic	chr17	-	967	2	NNC	ENSG00000263412.2	novel	566	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047903	True	NA	NA	False	AATAAA	-18	NA	48048085	48046880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_48046971_48047208
transcript_41207.known	chr17	+	4390	6	FSM	ENSG00000082641.16	ENST00000585291.5	4390	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.6263662194678	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTTTTTCCCCACTTT	48039499	True	NA	-2	True	AATAAA	-25	NA	48048362	48061487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48048463_48050606_48050820_48051116_48051629_48056385_48056599_48057343_48057503_48058294
transcript_41208.nic	chr17	+	252	2	ISM	ENSG00000082641.16	ENST00000584137.5	529	3	-30	642	0	-317	5prime_fragment	FALSE	canonical	3	161	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCAGCTGTTCCTGAGA	48039465	True	NA	22	True	AATAAA	-28	NA	48048328	48050724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_48048463_48050606
transcript_4121.nic	chr1	-	1908	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	101.334565745732	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887626	True	NA	-18	True	AATAAA	-27	NA	53889819	53851718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_41210.known	chr17	-	578	5	FSM	ENSG00000108468.15	ENST00000402583.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	243.003472197415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGCTGACGTGGCATT	-48101285	False	NA	NA	False	NA	NA	NA	48101302	48071498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48071580_48075005_48075101_48075988_48076179_48076864_48077042_48101267
transcript_41211.known	chr17	-	2422	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	219.942606149877	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-48101181	False	NA	-1	True	AATAAA	-23	NA	48101198	48070051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
transcript_41213.known	chr17	-	2182	5	FSM	ENSG00000108468.15	ENST00000225603.9	2182	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_3	46.9913555880228	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATTTCTGTCTTAAG	-48068270	True	NA	-8	True	AATAAA	-16	NA	48101478	48070058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48101267
transcript_41217.nic	chr17	-	570	3	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-211	1091	-20	-928	5prime_fragment	FALSE	canonical	3	503	junction_1	61.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGAAGAGGTAA	-48101481	False	NA	NA	False	NA	NA	NA	48101498	48076016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_48076179_48076864_48077042_48101267
transcript_41220.known	chr17	+	2733	8	FSM	ENSG00000002919.15	ENST00000393405.6	2733	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	53.3731569007401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGGTATTCATCC	48107539	False	NA	14	True	AATAAA	-24	NA	48107557	48123074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107839_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41222.known	chr17	+	1200	7	FSM	ENSG00000002919.15	ENST00000580219.5	1200	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.4090350900393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCTCCTCAGGTGACC	48107530	False	NA	NA	False	NA	NA	NA	48107548	48121808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107597_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41224.known	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	24.3430345958209	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	48107177	True	NA	NA	False	NA	NA	NA	48107765	48123601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41226.known	chr17	+	1282	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	30.8436919536772	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTTATGTTGTATCC	48107199	True	NA	NA	False	NA	NA	NA	48107787	48121887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41227.nic	chr17	+	2867	7	NIC	ENSG00000002919.15	novel	2733	8	NA	NA	7	-329	intron_retention	FALSE	canonical	3	13	junction_1	57.2084395483355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	48107100	True	NA	14	True	AATAAA	-15	NA	48107582	48122745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_48107839_48110707_48110768_48112030_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41228.nnic	chr17	+	2183	7	NIC	ENSG00000002919.15	novel	922	8	NA	NA	-34	-329	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51.204383492909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	48107828	False	NA	14	True	AATAAA	-15	NA	48107859	48122745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_48107980_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41229.nnic	chr17	+	2209	7	NIC	ENSG00000002919.15	novel	922	8	NA	NA	-34	-329	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	53.570566130624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	48107828	False	NA	14	True	AATAAA	-15	NA	48107859	48122745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_48107980_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41233.known	chr17	-	2034	2	FSM	ENSG00000120094.9	ENST00000239174.7	2034	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCCTGCTTCTGTTTC	-48530983	True	NA	NA	False	AATAAA	-18	NA	48531011	48528525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48529876_48530327
transcript_41235.nnic	chr17	-	547	3	NNC	ENSG00000159182.5	novel	382	2	NA	NA	-534	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_2	132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGAAAGTTAACTGTG	-48723033	False	NA	-13	True	AATAAA	-20	NA	48723052	48721718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_48721900_48722317_48722404_48722772
transcript_41236.known	chr17	-	382	2	FSM	ENSG00000159182.5	ENST00000290294.5	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGAAAGTTAACTGTG	-48719941	True	NA	-13	True	AATAAA	-20	NA	48722518	48721718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48721900_48722317
transcript_41237.known	chr17	+	560	2	FSM	ENSG00000229637.4	ENST00000422730.4	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTGTTTGCTCTGAA	48722684	True	NA	15	True	AATAAA	-15	NA	48723184	48724758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48723314_48724327
transcript_41238.known	chr17	+	504	2	FSM	ENSG00000229637.4	ENST00000432056.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCACATCTTTTGTTTG	48723621	False	NA	8	True	AATAAA	-8	NA	48723691	48724751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48723772_48724327
transcript_41239.known	chr17	-	3039	2	FSM	ENSG00000159184.8	ENST00000290295.8	3039	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGAATCTTAGAGATT	-48728503	True	NA	NA	False	AATAAA	-17	NA	48728750	48724762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48727044_48727992
transcript_4124.known	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	85.1964788004763	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887540	True	NA	-18	True	AATAAA	-27	NA	53889733	53851718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_41241.nic	chr17	-	1004	7	ISM	ENSG00000170703.16	ENST00000393382.8	3573	16	140	34752	-12	144	5prime_fragment	FALSE	non_canonical	1	5	junction_2	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTCAAGACATTGTGAG	-48816295	True	NA	NA	False	ATTAAA	-26	NA	48817089	48796985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890_48803929_48804771_48804992_48816969
transcript_41244.known	chr17	+	1916	14	FSM	ENSG00000136436.15	ENST00000448105.6	1916	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	42.173914369601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTTTCTCCAAATGAT	48829271	True	NA	NA	False	NA	NA	NA	48831033	48863453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48831079_48841697_48841888_48846442_48846515_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_41246.known	chr17	+	3635	13	FSM	ENSG00000136436.15	ENST00000258947.8	3635	13	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_1	19.394300422776	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTTTTTTGAGACAG	48829272	True	NA	NA	False	AGTAAA	-5	NA	48831034	48865245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_41250.known	chr17	+	1438	12	FSM	ENSG00000136436.15	ENST00000416445.6	1438	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.7081002762839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTCTGCTGCCATCCTT	48829272	True	NA	113	True	NA	NA	NA	48831034	48863174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_41251.known	chr17	+	1396	12	FSM	ENSG00000136436.15	ENST00000508679.5	1396	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.4617708255333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGCTACCTTTAAGTCG	48829272	True	NA	NA	False	NA	NA	NA	48831034	48863196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48831079_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_41262.known	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	669.958720743301	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880613	True	NA	38	True	ATTAAA	-18	NA	48892764	48895871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_41264.known	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	1674.62374505439	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880645	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
transcript_41266.known	chr17	+	646	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_1	1508.36523677125	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880635	True	NA	38	True	ATTAAA	-18	NA	48892786	48895871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_41271.known	chr17	+	359	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	754.729237688737	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCATCTCCCACTGTA	48880650	True	NA	NA	False	NA	NA	NA	48892801	48895349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
transcript_41272.known	chr17	+	468	4	FSM	ENSG00000159199.14	ENST00000506855.1	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1674.41180385498	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880665	True	NA	38	True	ATTAAA	-18	NA	48892816	48895871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48895155_48895335_48895654
transcript_41278.known	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2033.34224041765	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	48880702	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
transcript_4128.known	chr1	-	1821	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	84.8070751765441	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-53887604	True	NA	-32	True	AATAAA	-13	NA	53889797	53851732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_41281.known	chr17	+	2214	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	48880615	True	NA	35	True	ATTAAA	-15	NA	48892766	48895868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48895335_48895654
transcript_41288.known	chr17	-	1051	9	FSM	ENSG00000159210.10	ENST00000510558.6	1051	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	686.750091008367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTTCCCTCATTCT	-48934250	True	NA	-30	True	AATAGA	-17	NA	48944806	48930370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48930613_48931642_48931718_48933204_48933347_48934478_48934577_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_41292.known	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	518.534315869928	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	-48934254	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_41298.nic	chr17	-	1095	4	ISM	ENSG00000159224.4	ENST00000357424.2	716	6	3550	0	3550	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	48965046	48958553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_48958717_48960885_48960988_48961726_48961820_48964309
transcript_41303.nnic	chr17	-	506	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	459	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	13	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	-48996664	True	NA	-12	True	ATTAAA	-16	NA	48997033	48995265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_48995583_48996417_48996492_48996918
transcript_41304.nnic	chr17	-	458	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	361	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	13.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	-48996762	True	NA	-12	True	ATTAAA	-16	NA	48997131	48995265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_48995583_48996417_48996492_48997064
transcript_41305.known	chr17	+	8796	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_10	112.129230291277	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	48989091	False	NA	23	True	AATAAA	-24	NA	48997384	49056145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
transcript_41307.known	chr17	+	1718	8	FSM	ENSG00000108798.9	ENST00000419580.6	1718	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.53409053624371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAGGAGGGATTGAAA	49210376	True	NA	NA	False	AATAAA	-36	NA	49210410	49223036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49210842_49216530_49216681_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_41308.known	chr17	+	1629	8	FSM	ENSG00000108798.9	ENST00000225941.6	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	2.71052370871575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGTGTGTGGTGTG	49210557	True	NA	5	True	NA	NA	NA	49210706	49223225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49210842_49216530_49216699_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_41311.known	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_7	1814.59125661164	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346757	True	NA	-23	True	AATAAA	-4	NA	49414884	49404071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
transcript_41316.known	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	1601.41926635927	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346731	True	NA	-23	True	AATAAA	-4	NA	49414858	49404071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
transcript_41319.known	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3539	junction_6	341.85803583749	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-49346755	True	NA	-3	True	AATAAA	-24	NA	49414882	49404051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_41321.known	chr17	-	1860	12	FSM	ENSG00000121067.19	ENST00000509079.6	1860	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	92.5262526962836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAGAAGGGAAAAGGAA	-49675271	True	NA	-10	True	AAAAAG	-30	NA	49678110	49599989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49677932
transcript_41325.known	chr17	-	2965	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	77.3113187056074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCTGTCATTGACT	-49678152	False	NA	-2	True	AATAAA	-18	NA	49678163	49598885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
transcript_41327.known	chr17	-	1707	11	FSM	ENSG00000121067.19	ENST00000513080.6	1707	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	87.5097708830277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGTGGTACTTCGGAGAC	-49675274	True	NA	-65	True	NA	NA	NA	49678113	49600092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49620620_49620671_49621945_49622068_49622732_49622877_49677932
transcript_41330.known	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	82.8505280610812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675271	True	NA	0	True	AATAAA	-20	NA	49678110	49598883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
transcript_41331.known	chr17	-	2850	10	FSM	ENSG00000121067.19	ENST00000504102.6	2850	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_9	26.7517162250883	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675258	True	NA	0	True	AATAAA	-20	NA	49678097	49598883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49677932
transcript_41335.known	chr17	+	3588	16	FSM	ENSG00000136504.13	ENST00000675278.1	3588	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	279.047299853547	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCTGTTTCATCTG	49781593	True	NA	18	True	AATAAA	-12	NA	49788647	49829090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823236_49825505_49825543_49825999_49826147_49826692_49826800_49827400
transcript_41337.known	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	262.43910536288	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	49781651	True	NA	24	True	AATAAA	-18	NA	49788705	49829096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_41344.nic	chr17	+	2662	9	NIC	ENSG00000136504.13	novel	912	8	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	295	junction_1	137.532723378838	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	49801938	True	NA	24	True	AATAAA	-18	NA	49814990	49829096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_49815075_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_41347.known	chr17	-	1320	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	96.6187740555633	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAGCAAAATCACA	-49708073	False	NA	-33	True	AATAAA	-2	NA	49708090	49701338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
transcript_41349.known	chr17	-	1615	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_7	70.9977992616673	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTTTTCTTAGG	-49707947	False	NA	-17	True	ATTAAA	-13	NA	49707964	49700942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
transcript_41362.known	chr17	-	2329	8	FSM	ENSG00000121104.8	ENST00000240364.7	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_7	20.4230761839721	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAGTTCTGTTAAATA	-49760892	True	NA	-7	True	AATAAA	-20	NA	49764131	49710331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49763891
transcript_41366.known	chr17	+	3364	11	FSM	ENSG00000005882.12	ENST00000503176.6	3364	11	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_4	26.5648263687155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAATGGGCCCTGAG	50093477	True	NA	NA	False	NA	NA	NA	50095350	50112152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884_50106070_50106793_50106884_50107075_50107154_50108155_50108233_50108318_50108418_50108611_50108720_50109286_50109401_50109956
transcript_41369.known	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	11.2644968324772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	50093513	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
transcript_4137.nic	chr1	-	1654	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	42.0399574772782	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	NA	False	NA	-32	True	AATAAA	-13	NA	53889850	53851732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_41370.known	chr17	+	1057	8	FSM	ENSG00000108823.17	ENST00000344627.10	1057	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.57790871674104	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	50165985	True	NA	30	True	NA	NA	NA	50166004	50175928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50170639_50170667_50175256_50175450_50175711
transcript_41374.known	chr17	+	1272	6	FSM	ENSG00000249406.3	ENST00000654981.1	1272	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.85472369909914	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGATTTATAGAAAAGT	50208096	True	NA	NA	False	AATAAA	-24	NA	50208129	50215423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50208199_50209335_50209407_50213834_50213916_50214100_50214776_50214919_50214983_50215110
transcript_41378.known	chr17	+	2693	5	FSM	ENSG00000167105.8	ENST00000507382.2	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	13.2098448136229	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAAAGCATCCATCAC	50273150	True	NA	NA	False	AATAAA	-19	NA	50274465	50281485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_4138.nic	chr1	-	1679	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	111.200630604838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-53887626	True	NA	-32	True	AATAAA	-13	NA	53889819	53851732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889243_53889464_53889712
transcript_41380.nnic	chr17	+	1014	5	NNC	ENSG00000167105.8	novel	2693	5	NA	NA	0	677	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	67.0410322116239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTGATTGCGGCTGAG	50273150	True	NA	39	True	GATAAA	-18	NA	50274465	50279793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_50274584_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_41385.known	chr17	-	742	5	FSM	ENSG00000108826.16	ENST00000503633.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	682.086688038991	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-50362539	True	NA	-14	True	AATAAA	-37	NA	50373196	50367867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50368314_50368837_50368868_50370031_50370100_50370454_50370587_50373130
transcript_41387.known	chr17	-	732	4	FSM	ENSG00000108826.16	ENST00000507088.5	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	696.995616118845	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCCTGGTGATCTGTT	-50372947	False	NA	-3	True	NA	NA	NA	50372960	50367856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50372870
transcript_41389.known	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_3	91.3613095839201	1359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	-50362527	True	NA	-13	True	AATAAA	-38	NA	50373184	50367866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
transcript_4139.known	chr1	-	1503	9	FSM	ENSG00000058799.15	ENST00000371399.5	1503	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	103.209662217256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-53887586	True	NA	-32	True	AATAAA	-13	NA	53889779	53851732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53889712
transcript_41391.known	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_2	40	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-50362550	True	NA	-14	True	AATAAA	-37	NA	50373207	50367867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50370100_50370454_50370587_50373130
transcript_41392.known	chr17	-	636	3	FSM	ENSG00000108826.16	ENST00000508200.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	669	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATGGAACTGCCTGGT	-50359916	False	185	-11	True	AATAAA	-40	NA	50370573	50367864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50368314_50370031_50370100_50370454
transcript_41396.known	chr17	+	2330	9	FSM	ENSG00000154920.15	ENST00000338165.9	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	19.4983973700404	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTAGTGATTCTGA	50371288	True	NA	42	True	AATAAA	-42	NA	50373228	50381483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379106_50379225_50379451_50379568_50380311_50380502_50380762
transcript_4140.nic	chr1	-	1490	9	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	95.5664036154966	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	NA	False	NA	-32	True	AATAAA	-13	NA	53889850	53851732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889712
transcript_41405.known	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	56.4852488118211	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-50380134	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
transcript_41410.nic	chr17	+	1454	2	ISM	ENSG00000154920.15	ENST00000511711.5	679	4	-22	-387	0	387	intron_retention	FALSE	canonical	3	96	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGATGTCATTTGTGG	50371279	True	NA	6	True	AATAAA	-16	NA	50373219	50376580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50373278_50375184
transcript_41412.known	chr17	+	2177	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	9.78979060041634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	50425969	True	NA	9	True	CATAAA	-21	NA	50426217	50474837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_41415.known	chr17	+	594	6	FSM	ENSG00000167107.13	ENST00000506582.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	16.48757107642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGACCACAGTCATCTC	50425969	True	NA	NA	False	NA	NA	NA	50426217	50462426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50426390_50460676_50460873_50461241_50461288_50461632_50461687_50462183_50462303_50462419
transcript_41419.known	chr17	+	3539	18	FSM	ENSG00000006282.21	ENST00000504334.5	3539	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.9365217735426	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGGGCCTCAGCTTT	50543034	False	NA	14	True	AATAAA	-20	NA	50543057	50555850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50543536_50546305_50546482_50547067_50547286_50547664_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_4142.known	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_5	57.4372701301167	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53941212	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_41420.known	chr17	+	334	2	FSM	ENSG00000136449.15	ENST00000573066.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTGCCTCTGTGTC	NA	False	NA	13	True	AATAAA	-33	NA	50530153	50531501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50530313_50531326
transcript_41421.known	chr17	-	4166	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	26.7523363465698	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCTATATGCCTTCATT	-50707569	False	NA	-9	True	ATTAAA	-18	NA	50707914	50693197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
transcript_4144.nnic	chr1	-	570	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-258	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_5	245.786574084102	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53945944	False	NA	-8	True	ATTAAA	-15	NA	53945957	53921560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945927
transcript_41446.nic	chr17	+	1994	12	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	3	214	junction_11	189.231154285086	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGATTGTCTCTGTC	50704592	True	NA	17	True	AATAAA	-21	NA	50719564	50752640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746_50750853_50752199
transcript_41447.nic	chr17	+	2065	12	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	214	junction_11	189.231154285086	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCCCCTGTTTTAAATA	50704592	True	NA	13	True	AATAAA	-16	NA	50719564	50752711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746_50750853_50752199
transcript_4145.nnic	chr1	-	623	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-620	0	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_5	193.392864397837	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53946306	False	NA	-8	True	ATTAAA	-15	NA	53946319	53921560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_41450.known	chr17	+	2284	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_10	148.95301272549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTTGTTACACTCAAT	50704626	True	NA	NA	False	AATAAA	-13	NA	50719598	50751617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
transcript_41453.known	chr17	+	1972	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_10	72.1338339477391	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	50704630	True	NA	11	True	AATAAA	-14	NA	50719602	50752709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
transcript_41461.known	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	59.9526562185056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	50704630	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
transcript_41472.nic	chr17	+	924	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-34	5835	0	969	5prime_fragment	FALSE	canonical	3	628	junction_2	34.7803603976117	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGAAGAAAGAGAAAA	50704592	True	NA	NA	False	AAAAAG	-10	NA	50719564	50745782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_41473.nic	chr17	+	999	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-34	5760	0	1044	5prime_fragment	FALSE	canonical	3	628	junction_2	34.7803603976117	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAAAAAGAAAGGGC	50704592	True	NA	NA	False	AAGAAA	-30	NA	50719564	50745857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_41477.known	chr17	+	1112	9	FSM	ENSG00000108848.16	ENST00000508045.5	1112	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	316.688505277662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTGTTTGTTT	50704597	True	NA	22	True	ATTAAA	-22	NA	50719569	50744813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50738136_50738200_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_41480.nic	chr17	+	536	5	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-34	9944	0	0	5prime_fragment	FALSE	canonical	3	628	junction_2	41.0814739268201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAATGAAGAAAAAATTC	50704592	True	NA	NA	False	NA	NA	NA	50719564	50741673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656
transcript_41481.known	chr17	+	533	4	FSM	ENSG00000108848.16	ENST00000508218.5	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	31.084115271666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGACCTCCCTAA	50704624	True	NA	NA	False	NA	NA	NA	50719596	50741292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101
transcript_41482.known	chr17	+	1351	2	FSM	ENSG00000229980.5	ENST00000416263.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATTTGTTTGTTTT	NA	False	NA	21	True	TATAAA	-18	NA	50866678	50868307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50867218_50867495
transcript_41489.known	chr17	+	1193	9	FSM	ENSG00000011052.21	ENST00000555572.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	3157.69411269917	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	51104167	True	NA	23	True	AATAAA	-15	NA	51153635	51171742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41490.known	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	2640.41310929845	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104121	True	NA	25	True	AATAAA	-17	NA	51153589	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41492.known	chr17	+	894	7	FSM	ENSG00000011052.21	ENST00000376392.10	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	2422.55656968694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104135	True	NA	25	True	AATAAA	-17	NA	51153603	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51171486
transcript_41497.known	chr17	+	986	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	1740.53548082192	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	51104107	True	NA	53	True	ATTAAA	-43	NA	51153575	51162061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_41498.known	chr17	+	796	6	FSM	ENSG00000239672.8	ENST00000013034.3	796	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1782.50190462731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGACCAGGCTGTAGGA	51104196	False	NA	NA	False	NA	NA	NA	51153664	51161898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153725_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_41502.known	chr17	+	781	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	1474.55575937297	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	51104128	True	NA	27	True	ATTAAA	-17	NA	51153596	51162035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
transcript_41503.known	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	3088	junction_1	409.403834862352	4798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	51104090	True	NA	NA	False	TATAAA	-29	NA	51153558	51162168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_41508.known	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	3226.25745834086	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51164784	False	NA	25	True	AATAAA	-17	NA	51165434	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41510.known	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	5160	junction_1	1058.96659531828	3698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081498	True	NA	25	True	AATAAA	-17	NA	51166410	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41513.known	chr17	+	749	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	365	junction_1	3094.591037197	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081505	True	NA	25	True	AATAAA	-17	NA	51166417	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41519.known	chr17	+	568	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	2920.09604103853	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081507	True	NA	25	True	AATAAA	-17	NA	51166419	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
transcript_41521.known	chr17	+	987	2	FSM	ENSG00000239672.8	ENST00000487481.1	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	3088	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGGGTGGGTGCCTGTA	51104103	True	NA	NA	False	AATACA	-14	NA	51153571	51156546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650
transcript_41523.known	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	3214.20669644937	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	51165758	False	NA	24	True	AATAAA	-16	NA	51165814	51171743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41524.known	chr17	+	866	4	FSM	ENSG00000243678.12	ENST00000393190.4	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	7133	junction_3	409.074022098147	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081651	False	NA	25	True	AATAAA	-17	NA	51166563	51171744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166957_51168241_51168344_51169936_51170050_51171486
transcript_41528.known	chr17	+	1876	14	FSM	ENSG00000011260.14	ENST00000225298.12	1876	14	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_4	60.1043471337864	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATCTGGTTCTTCC	51251578	True	NA	NA	False	AATAAA	-25	NA	51260545	51297933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51260927_51263273_51263387_51266181_51266281_51268836_51268905_51273361_51273451_51275865_51275992_51277129_51277305_51280004_51280106_51280388_51280480_51285244_51285369_51288028_51288204_51293902_51294046_51296964_51297004_51297781
transcript_4154.nic	chr1	+	1873	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	101.591092129182	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942394	True	NA	23	True	AATAAA	-19	NA	53946326	53968168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_41541.known	chr17	+	2168	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_12	80.4601764850165	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	54896655	True	NA	NA	False	AATAAA	-16	NA	54900851	54961956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_41543.known	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	119.020707815442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	54896555	True	NA	NA	False	AATAAA	-9	NA	54900751	54961949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
transcript_41547.known	chr17	+	1895	15	FSM	ENSG00000141198.16	ENST00000348161.8	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	120.065883274686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAATTATAAATTGTTA	54896609	True	NA	NA	False	ACTAAA	-44	NA	54900805	54961722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_4155.known	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	65.5809375886012	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942417	True	NA	23	True	AATAAA	-19	NA	53946349	53968168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_41550.known	chr17	+	1522	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	118.343447632867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	54896656	True	NA	NA	False	NA	NA	NA	54900852	54961475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_41554.known	chr17	+	1849	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	31.7260651495981	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	54896660	True	NA	9	True	AGTAAA	-20	NA	54900856	54938033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
transcript_41570.known	chr17	+	2337	7	FSM	ENSG00000141198.16	ENST00000572405.5	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	156.245533269488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACTTTAAACATATTT	54896637	True	NA	NA	False	AATAAA	-29	NA	54900833	54917452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903712_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745
transcript_41574.known	chr17	-	1054	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	158.854493169063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAACCTGTGTCCTTGT	-54958258	True	NA	-14	True	AATAAA	-11	NA	54968654	54951908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
transcript_41577.known	chr17	-	2663	5	FSM	ENSG00000166260.13	ENST00000576370.5	2663	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	135.368709456802	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCTTGTGGAGAGT	-54958257	True	NA	-7	True	AATAAA	-18	NA	54968653	54951901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_54952113_54961118_54962916_54963305_54963432_54964696_54964853_54968280
transcript_4158.nnic	chr1	+	1626	9	NNC	ENSG00000116212.15	novel	611	3	NA	NA	269	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	91.0397406356147	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942694	False	NA	23	True	AATAAA	-19	NA	53946626	53968168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_53946689_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_41585.known	chr17	-	3150	4	FSM	ENSG00000166260.13	ENST00000299335.8	3150	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	27.7168220079832	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCTAGTTTATTT	-54958258	True	NA	NA	False	AGTAAA	-20	NA	54968654	54960421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_54962916_54963305_54963432_54964696_54964853_54968280
transcript_41588.known	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	12	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-54958307	True	NA	15	True	ATTAAA	-33	NA	54968703	54962902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_54963432_54964696_54964853_54968280
transcript_4159.known	chr1	+	1727	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	51.0138036541612	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942420	True	NA	23	True	AATAAA	-19	NA	53946352	53968168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_41593.known	chr17	+	15590	18	FSM	ENSG00000166263.13	ENST00000376352.6	15590	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	12.3965616396011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTGGTTTTTGTGTGAA	54966616	True	NA	8	True	AATAAA	-18	NA	54968764	55173632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049_55081184_55141309_55141368_55159796
transcript_41597.known	chr17	+	2229	11	FSM	ENSG00000166263.13	ENST00000405898.5	2229	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5579561639696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTATGTGTGTATTT	54966626	True	NA	3	True	AATAAA	-16	NA	54968774	55044776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54968816_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55043611
transcript_41602.nic	chr17	+	292	3	ISM	ENSG00000166263.13	ENST00000461444.5	456	4	-17	4739	-17	-4739	5prime_fragment	FALSE	canonical	3	50	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTCTACTTGAAAAGTA	54968686	False	NA	NA	False	AATAAA	-22	NA	54968709	54986249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_54968816_54985613_54985692_54986141
transcript_41603.known	chr17	+	1174	5	FSM	ENSG00000166263.13	ENST00000464340.5	1174	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	23.2486558751253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATATAGCATGAGAAAGG	54966643	True	NA	NA	False	AATAAA	-19	NA	54968791	54991852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54991038
transcript_41604.known	chr17	-	2569	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.7039486250005	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-55419540	True	NA	-19	True	AATAAA	-14	NA	55421835	55392621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_41610.known	chr17	+	2680	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	45.3854602268171	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	55748285	True	NA	10	True	AATAAA	-11	NA	55751060	55777368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
transcript_41612.known	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	23.0963200532033	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	55748275	True	NA	16	True	AATAAA	-17	NA	55751050	55777374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_41613.known	chr17	+	919	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	53.1473423606487	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGAGCTCGCATTCTA	55748318	True	NA	NA	False	AATAAA	-20	NA	55751093	55823090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
transcript_41615.known	chr17	+	1856	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	53.1804475347848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	55751374	True	NA	16	True	AATAAA	-17	NA	55751399	55777374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_41618.known	chr17	+	1843	2	FSM	ENSG00000153933.10	ENST00000572810.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTTCTATTTCC	56833260	True	NA	NA	False	AATAAA	-13	NA	56834106	56836466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56834261_56834777
transcript_41619.known	chr17	+	348	1	FSM	ENSG00000274213.1	ENST00000619432.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTTTTTCTTCTTCTT	56913942	True	NA	9	True	AATAAA	-20	NA	56914185	56914533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56914200_56914500
transcript_41620.known	chr17	-	2634	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	17.410884207555	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-56960093	True	NA	-15	True	AATAAA	-17	NA	56961050	56938198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
transcript_41621.nic	chr17	-	2809	6	NIC	ENSG00000121058.5	novel	2634	7	NA	NA	-54	0	intron_retention	FALSE	canonical	3	307	junction_3	16.8689063071676	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-56960147	True	NA	-15	True	AATAAA	-17	NA	56961104	56938198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56950997_56960774
transcript_41623.nic	chr17	-	648	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-54	12480	-54	234	5prime_fragment	FALSE	canonical	3	350	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATGTGAATATAAAA	-56960147	True	NA	NA	False	AAGAAA	-16	NA	56961104	56950678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_56950997_56960774
transcript_41624.nic	chr17	-	509	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	7	12558	7	156	5prime_fragment	FALSE	canonical	3	350	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAGAAAAAATAAAGCAA	-56960086	True	NA	NA	False	NA	NA	NA	56961043	56950756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_56950997_56960774
transcript_41626.known	chr17	+	1915	13	FSM	ENSG00000121064.13	ENST00000576154.5	1915	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	86.2518920887472	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	56974383	True	NA	14	True	AATAAA	-23	NA	56978147	57006768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998373_56998499_57000854_57000993_57002017_57002182_57006172
transcript_41627.known	chr17	+	1921	13	FSM	ENSG00000121064.13	ENST00000262288.8	1921	13	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_9	27.2960874282174	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	56974366	True	NA	14	True	AATAAA	-23	NA	56978130	57006768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998384_56998499_57000854_57000993_57002017_57002182_57006172
transcript_41628.nic	chr17	+	1842	12	NIC	ENSG00000121064.13	novel	1921	13	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	83.9485281103893	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	56974331	True	NA	14	True	AATAAA	-23	NA	56978095	57006768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_57000854_57000993_57002017_57002182_57006172
transcript_41637.nic	chr17	+	1090	8	ISM	ENSG00000121064.13	ENST00000262288.8	1921	13	-35	10893	-33	0	5prime_fragment	FALSE	canonical	3	287	junction_1	16.9777765905664	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	56974331	True	NA	NA	False	ACTAAA	-15	NA	56978095	56995875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506
transcript_41639.known	chr17	-	713	3	FSM	ENSG00000263004.3	ENST00000576871.2	740	3	19	8	2	-2	multi-exon	FALSE	canonical	3	5	junction_1	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGTTTGCAGTATT	-57084944	True	NA	-7	True	AATAAA	-16	NA	57085022	57078297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57078704_57079286_57079411_57084839
transcript_41640.known	chr17	+	2247	15	FSM	ENSG00000153944.12	ENST00000675656.1	2247	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	5.53698142179528	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTTTGGCTTGGGTG	57256752	False	NA	NA	False	TTTAAA	-11	NA	57256781	57680738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57650649_57650674_57652098_57652162_57674917_57675127_57676986_57677060_57679548
transcript_41645.known	chr17	-	5609	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_4	64.5155020130821	834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCAGATTTCTTTTT	-57838020	True	NA	-6	True	AATAAA	-22	NA	57850044	57834780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
transcript_41653.nic	chr17	-	2085	8	ISM	ENSG00000180891.13	ENST00000407144.6	2190	11	17909	267	-2109	0	3prime_fragment	FALSE	canonical	3	28	junction_3	6.5621051873462	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGAAAGCAGATAAAAGT	NA	False	NA	-104	True	TTTAAA	-11	NA	57874779	57862962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_57863286_57866473_57866545_57867356_57867416_57868149_57868244_57869121_57869194_57871285_57871370_57872662_57872856_57873590
transcript_41654.known	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	18.9272290629136	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-57985189	True	NA	-5	True	ATTAAA	-17	NA	57988254	57971551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
transcript_4166.known	chr1	-	6457	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_7	150.681174426438	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTTGTAAAAGTGTC	-54042448	False	10756	-11	True	AATAAA	-28	NA	54053204	54026680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
transcript_41675.known	chr17	-	1720	4	FSM	ENSG00000136450.13	ENST00000581979.5	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	640.901621849164	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCAAAGATTTTTTTTT	-57975863	True	NA	NA	False	NA	NA	NA	58007232	58003806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58004002_58004922_58005974_58006342_58006528_58006943
transcript_41676.known	chr17	-	1465	4	FSM	ENSG00000136450.13	ENST00000583741.1	1465	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	769.970706513494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATATACATTTTCCTT	-57975892	True	NA	NA	False	ACTAAA	-17	NA	58007261	58004848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006906
transcript_41677.known	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1335	junction_1	199.707007610872	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	-57975877	True	NA	-10	True	ATTAAA	-19	NA	58007246	58000918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
transcript_41679.known	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1591	junction_2	116.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-57975892	True	NA	-8	True	ATTAAA	-17	NA	58007261	58003359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005974_58006342_58006528_58006943
transcript_41681.known	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_3	20.5229216102066	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_41685.known	chr17	-	2260	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	38.6316236230112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_41689.known	chr17	-	1626	14	FSM	ENSG00000011143.19	ENST00000585134.2	1626	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	19.2698065321628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCAGGCATTGTGC	-58217779	True	NA	-12	True	AATAAA	-16	NA	58219255	58207565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_4169.known	chr1	-	1116	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	220.906481275194	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	NA	False	NA	34	True	NA	NA	NA	54053504	54031965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
transcript_41690.known	chr17	-	1289	12	FSM	ENSG00000011143.19	ENST00000581761.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	46.3235120494446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTCTGAATG	-58217779	True	NA	NA	False	AATAAA	-29	NA	58219255	58208653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58208894_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_41693.known	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	42.0602701671139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-58217779	True	NA	-7	True	AATAAA	-21	NA	58219255	58207560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_41694.known	chr17	-	1040	4	FSM	ENSG00000011143.19	ENST00000581180.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	8.17856276425687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGCTTTCATTATTAG	-58217754	True	NA	NA	False	AATAAA	-15	NA	58219230	58215464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58216244_58216665_58216737_58218619_58218730_58219150
transcript_41696.known	chr17	-	1643	5	FSM	ENSG00000213246.7	ENST00000577396.5	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	210.874962951983	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATTGTAGAAACGAAG	-58352411	False	NA	-73	True	AAAAAG	-37	NA	58352423	58345246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352064
transcript_41699.known	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	275.531405751786	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	-58340863	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
transcript_41701.nic	chr17	-	2406	5	ISM	ENSG00000108389.10	ENST00000582663.5	572	7	-25	1248	25	-1094	5prime_fragment	FALSE	canonical	3	16	junction_4	30.5655034311559	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATATATATATATTCCAA	-58517031	True	NA	NA	False	NA	NA	NA	58517880	58509415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_41702.nic	chr17	-	962	6	ISM	ENSG00000121101.16	ENST00000240361.12	4911	33	126040	-2	-1725	0	3prime_fragment	FALSE	canonical	2	10	junction_2	3.3466401061363	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTGTGTAAGATATAT	-58565965	False	NA	-14	True	AATAAA	-22	NA	58565983	58556677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_58557048_58557798_58557851_58559452_58559563_58561519_58561613_58564868_58564969_58565746
transcript_41707.nic	chr17	+	1313	10	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	53.5225809043871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690403	True	NA	10	True	AATAAA	-21	NA	58692559	58734331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692633_58694930_58695190_58696692_58696860_58703195_58703330_58705877_58706023_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_41713.nic	chr17	+	1354	10	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	53.7940746656711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690415	True	NA	10	True	AATAAA	-21	NA	58692571	58734331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58705877_58706023_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_41714.nic	chr17	+	1168	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	35	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690403	True	NA	10	True	AATAAA	-21	NA	58692559	58734331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692633_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_41716.known	chr17	+	2562	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	10.8050913924872	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTTCAAAATCACCTA	58690445	True	NA	5	True	AATAAA	-19	NA	58692601	58735611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_41720.nic	chr17	+	1209	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	35.6431971068814	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690415	True	NA	10	True	AATAAA	-21	NA	58692571	58734331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_41723.nic	chr17	+	1256	8	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	39.4135582183158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690410	True	NA	10	True	AATAAA	-21	NA	58692566	58734331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58732483_58732545_58734117
transcript_41725.known	chr17	+	1098	8	FSM	ENSG00000108384.15	ENST00000482007.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	44.438905550549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCAGATCATATGAAG	58690458	True	NA	6	True	AATAAA	-17	NA	58692614	58734327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58692789_58694930_58695190_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_41728.known	chr17	+	567	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	58690471	True	NA	7	True	ATTAAA	-18	NA	58692627	58695336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58692789_58694930
transcript_41730.known	chr17	+	1609	2	FSM	ENSG00000108384.15	ENST00000486827.1	1609	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTGTTACTTCATTA	58690449	True	NA	4	True	ATTAAA	-15	NA	58692605	58695333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58693812_58694930
transcript_41733.known	chr17	-	3622	25	FSM	ENSG00000108395.14	ENST00000393066.7	3622	25	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	60.8286385174688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATTGCTAAAGTGAAGC	-59106886	False	NA	-10	True	AATAAA	-20	NA	59106921	58982650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_41735.known	chr17	-	4489	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_15	32.6202298441483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59099954	True	NA	-3	True	AATAAA	-16	NA	59106880	58998201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_41738.known	chr17	-	570	4	FSM	ENSG00000182628.13	ENST00000583976.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	189.501685715164	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAATTCTAACAGAGAA	-59143562	True	NA	NA	False	AAGAAA	-11	NA	59155177	59112261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59154955
transcript_41740.known	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	112.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-59143579	True	NA	NA	False	AATAAA	-42	NA	59155194	59112046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59131280_59131368_59154955
transcript_41742.known	chr17	-	689	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	212.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTGTAAATTAAAGT	-59143569	True	NA	9	True	CATAAA	-34	NA	59155184	59111887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119318_59119496_59155130
transcript_41746.known	chr17	+	1338	2	FSM	ENSG00000224738.2	ENST00000451775.2	1524	2	0	186	0	-186	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAATCCTCT	59106567	False	NA	NA	False	NA	NA	NA	59106597	59118267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59107592_59117923
transcript_41747.known	chr17	-	689	2	FSM	ENSG00000182628.13	ENST00000580541.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	-59143569	True	NA	11	True	CATAAA	-36	NA	59155184	59111885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59154955
transcript_41748.known	chr17	-	533	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	-59143645	True	NA	-46	True	NA	NA	NA	59155260	59111942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59155130
transcript_41752.known	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	223.861564365123	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	-59143559	True	NA	NA	False	AATATA	-6	NA	59155174	59112090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
transcript_41760.nnic	chr17	+	1773	11	NNC	ENSG00000068489.13	novel	2334	11	NA	NA	-67	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.2815846894582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAATGGGTAGTGAC	59150232	True	NA	NA	False	NA	NA	NA	59155664	59203848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201758_59203430
transcript_41761.nnic	chr17	+	1891	11	NNC	ENSG00000068489.13	novel	2334	11	NA	NA	-67	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.2815846894582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAGTTGAGTATTTAT	59150232	True	NA	-22	True	AATAAA	-19	NA	59155664	59203966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201758_59203430
transcript_41762.nnic	chr17	+	1584	11	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-67	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	16.2815846894582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAATGGGTAGTGAC	59150232	True	NA	NA	False	NA	NA	NA	59155664	59203848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201943_59203804
transcript_41763.nnic	chr17	+	1702	11	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-67	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.2815846894582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAGTTGAGTATTTAT	59150232	True	NA	-22	True	AATAAA	-19	NA	59155664	59203966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201943_59203804
transcript_41765.known	chr17	+	6226	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	8.20568908339411	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	59150313	True	NA	NA	False	AATAAA	-34	NA	59155745	59206709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
transcript_41766.known	chr17	+	3221	4	FSM	ENSG00000167447.13	ENST00000300917.10	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	3.29983164553722	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATACATGGATGATA	59208696	True	NA	-1	True	AATAAA	-23	NA	59210034	59215230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59211811_59212340_59212487_59212728_59213602_59214804
transcript_41768.nnic	chr17	+	568	3	NNC	ENSG00000068489.13	novel	6226	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAATGGGTAGTGACG	59150313	True	NA	NA	False	NA	NA	NA	59155745	59203849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169842_59203435
transcript_41769.known	chr17	+	199	3	FSM	ENSG00000068489.13	ENST00000577457.1	199	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCTCACTTTCAGTCC	59150312	True	NA	29	True	AAAAAG	-1	NA	59155744	59169819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59155806_59163598_59163665_59169747
transcript_41771.known	chr17	+	3241	10	FSM	ENSG00000153982.11	ENST00000284116.9	3241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	59219903	True	NA	NA	False	AATAAA	-17	NA	59220510	59275970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784_59272837_59273650
transcript_41773.known	chr17	+	3575	18	FSM	ENSG00000108406.10	ENST00000251241.9	3575	18	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.7454699090628	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	59562684	True	NA	15	True	AATAAA	-27	NA	59565609	59608345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59586152_59586234_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_41782.known	chr17	+	3686	12	FSM	ENSG00000062716.13	ENST00000262291.9	3686	12	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_5	52.3675819220597	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAAGTCTCATTTT	59701450	True	NA	5	True	AATAAA	-36	NA	59707653	59842255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59737452_59737544_59738836_59738948_59764970_59765139_59773753_59773886_59808795_59808877_59811669_59811787_59817711_59817774_59838294_59838398_59839767
transcript_41806.known	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	156.406312031479	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	59603211	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
transcript_41810.known	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59707559	True	NA	-7	True	AATAAA	-17	NA	59707626	59697307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59697979_59698870_59700190_59707370
transcript_41811.known	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	0	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59700737	True	NA	-7	True	AATAAA	-17	NA	59707430	59697307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59697979_59707370
transcript_41812.known	chr17	-	1162	1	FSM	ENSG00000273702.1	ENST00000611877.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGCCTTTTATCTTT	-59619693	False	NA	-1	True	AATAAA	-16	NA	59619714	59618552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59618600_59619700
transcript_41813.known	chr17	-	409	3	FSM	ENSG00000141378.15	ENST00000587935.1	409	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTATCGCTTT	-59700722	True	NA	NA	False	ATTAAA	-23	NA	59707415	59674635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59674822_59679366_59679545_59707370
transcript_41815.known	chr17	-	2491	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	7.53325958665968	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891173	True	NA	16	True	AATAAA	-27	NA	59892943	59859478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_41817.nic	chr17	-	2280	8	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.5656925901081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891173	True	NA	16	True	AATAAA	-27	NA	59892943	59859478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59892696
transcript_41818.known	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	19.6531142051122	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-59891150	True	NA	NA	False	NA	NA	NA	59892920	59860012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_41824.known	chr17	-	2184	7	FSM	ENSG00000108423.15	ENST00000613721.4	2184	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.6648550189518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTAAATGTGTACTT	-59891175	True	NA	13	True	AATAAA	-45	NA	59892945	59859481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_41825.known	chr17	-	1027	6	FSM	ENSG00000108423.15	ENST00000539018.5	1027	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.4670313617852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATGGGAAAAGTATACC	-59891123	True	NA	NA	False	NA	NA	NA	59892893	59860316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59892696
transcript_41827.nic	chr17	-	1907	6	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	26.5932322217515	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891203	True	NA	16	True	AATAAA	-27	NA	59892973	59859478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59886082_59886231_59890830_59891042_59892696
transcript_41833.nic	chr17	-	1666	5	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	29.3342802877453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891173	True	NA	16	True	AATAAA	-27	NA	59892943	59859478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59886082_59886231_59892696
transcript_41839.known	chr17	+	5428	15	FSM	ENSG00000108443.14	ENST00000225577.9	5428	15	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_10	11.4258925431742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTGCTGAGAAACTG	59889926	True	NA	NA	False	AATAAA	-27	NA	59893120	59950574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_41845.known	chr17	+	1913	14	FSM	ENSG00000108443.14	ENST00000443572.6	1913	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.1063741678398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTATCCTTTCATTAGG	59889935	True	NA	NA	False	NA	NA	NA	59893129	59947137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_41847.known	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	-59964041	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
transcript_41850.known	chr17	-	1893	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	14.0784971368628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTGGACGTCATA	-59964035	True	NA	1	True	AATAAA	-14	NA	59964734	59952361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
transcript_41853.known	chr17	-	1809	7	FSM	ENSG00000189050.16	ENST00000466544.5	1809	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	17.1464281994822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTAATAAGTGAAAATAA	-59964062	True	NA	-33	True	NA	NA	NA	59964761	59952395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826_59963285_59964607
transcript_41857.known	chr17	+	692	3	FSM	ENSG00000267302.5	ENST00000593015.5	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGATCACTTGGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	59964831	59973104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59965189_59966402_59966468_59972834
transcript_41858.known	chr17	-	884	3	FSM	ENSG00000189050.16	ENST00000477207.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTACTGTTAAAGTAGT	-59964038	True	NA	NA	False	AAGAAA	-7	NA	59964737	59962320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59962617_59962826_59963285_59964607
transcript_4186.known	chr1	+	10429	5	FSM	ENSG00000116205.14	ENST00000234827.6	10429	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.76313972081441	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTGGGCTGCATTTG	54052498	True	NA	NA	False	AATAAA	-17	NA	54053607	54106082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54053759_54054380_54054525_54068755_54068898_54088596_54088791_54096284
transcript_41860.known	chr17	-	6108	20	FSM	ENSG00000068097.16	ENST00000184956.11	6108	20	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	11.8982295756979	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTTCAGATTTCTA	-60077858	True	NA	NA	False	AATAAA	-34	NA	60078921	60041007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60044135_60046024_60046230_60047308_60047406_60048263_60048389_60049579_60049703_60050842_60050978_60055514_60055602_60056114_60056238_60057047_60057404_60059421_60059522_60059889_60060097_60066208_60066387_60067433_60067733_60069710_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_41862.known	chr17	-	1592	5	FSM	ENSG00000267248.4	ENST00000670159.1	1592	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCAGACTTTGTTCTT	-60135378	True	NA	-7	True	AATAAA	-25	NA	60135680	60126534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60126866_60128535_60128660_60128955_60129091_60132435_60132513_60134755
transcript_41864.known	chr17	-	1361	3	FSM	ENSG00000267248.4	ENST00000658811.2	1374	3	12	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTTTGTTCTTGTCA	-60135402	True	NA	-3	True	AATAAA	-29	NA	60135704	60126530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60126866_60132435_60132513_60134755
transcript_41865.known	chr17	-	1107	4	FSM	ENSG00000267248.4	ENST00000662447.1	1107	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATGTGCAGACTTTGT	-60135411	True	NA	-11	True	AATAAA	-21	NA	60135713	60126538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60126866_60132435_60132513_60134755_60134842_60135096
transcript_41867.known	chr17	+	1123	8	FSM	ENSG00000167434.10	ENST00000300900.9	1123	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_3	2.2314999074019	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	60149627	True	NA	8	True	ATTAAA	-24	NA	60149972	60159546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282_60158447_60159229
transcript_41870.nic	chr17	-	2179	16	ISM	ENSG00000170832.13	ENST00000300896.9	6937	34	-19	42244	-19	0	5prime_fragment	FALSE	canonical	3	147	junction_8	11.6267889901822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGTGAAAACTA	-60392142	False	NA	NA	False	NA	NA	NA	60392152	60219570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_41874.known	chr17	-	436	2	FSM	ENSG00000170832.13	ENST00000590297.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAAGGTCTGTTTTCTG	-60422316	False	NA	NA	False	AATAAA	-23	NA	60422337	60421207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60421552_60422245
transcript_41875.known	chr17	-	6492	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_12	8.30996724154527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTGTATCTGTTTCC	-60524456	False	NA	-20	True	AATAAA	-16	NA	60526242	60443157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
transcript_41878.nic	chr17	-	1813	3	ISM	ENSG00000062725.10	ENST00000585368.1	447	4	-119	-1131	0	1131	intron_retention	FALSE	canonical	3	55	junction_2	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTTTGTTTTATT	-60524456	False	NA	NA	False	ATTAAA	-16	NA	60526242	60493342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_60494618_60500398_60500488_60525793
transcript_41881.known	chr17	+	932	1	FSM	ENSG00000259349.3	ENST00000661567.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTCTATATAAATTC	60526078	True	NA	NA	False	AATAAA	-13	NA	60526303	60527235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_60526300_60527200
transcript_41884.nnic	chr17	+	1191	3	NIC	ENSG00000141376.23	novel	2094	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	23.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	61245117	True	NA	28	True	AATAAA	-22	NA	61245203	61392831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_61245372_61368326_61368495_61391976
transcript_41885.known	chr17	-	799	1	FSM	ENSG00000253506.3	ENST00000521764.3	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAATGCTCTCTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	61591219	61590420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61590400_61591200
transcript_41887.known	chr17	-	2807	17	FSM	ENSG00000136492.10	ENST00000584322.2	2807	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	21.6498231805712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCCATTTTTGCCTAT	-61861164	False	NA	NA	False	AATAAA	-26	NA	61863327	61739056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61739411_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_41888.known	chr17	-	1628	7	FSM	ENSG00000136492.10	ENST00000682369.1	1628	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.4770639602164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTGAGTTCTTACAAT	-61861207	False	NA	NA	False	AATAAA	-16	NA	61863370	61844935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61845820_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_41889.known	chr17	-	5837	25	FSM	ENSG00000108506.13	ENST00000647009.1	5837	25	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_24	20.629671188202	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATATTCTTTATCAAAC	-61925602	True	NA	-22	True	TATAAA	-2	NA	61927982	61865389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927921
transcript_41891.nnic	chr17	+	662	5	NNC	ENSG00000087995.16	novel	1556	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	154.127382382236	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	62417448	True	NA	-17	True	NA	NA	NA	62423879	62448914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_62424013_62440740_62440757_62444836_62444944_62447700_62447767_62448574
transcript_41892.known	chr17	+	1556	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_1	35.4901538515708	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	62417443	True	NA	-17	True	NA	NA	NA	62423874	62448914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_41894.known	chr17	-	1154	1	FSM	ENSG00000274565.1	ENST00000611274.1	1154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTGTTTCCTATCTTG	-62627555	False	NA	NA	False	AATAAA	-14	NA	62627590	62626436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_62626400_62627600
transcript_41895.known	chr17	-	2377	6	FSM	ENSG00000173838.12	ENST00000580520.5	2377	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.74355957741627	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTTCATGTTTATTTC	NA	False	NA	NA	False	AGTAAA	-18	NA	62744514	62701313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_62701759_62711230_62711345_62722487_62722598_62724937_62725105_62735930_62737333_62744375
transcript_41897.known	chr17	-	3151	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	49.3169342112828	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	-63444149	False	NA	-9	True	AATAAA	-11	NA	63446184	63432306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
transcript_41898.known	chr17	-	2929	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	31.5556651015313	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGCCTGTTATCTTCC	-63444271	True	NA	-6	True	AATAAA	-14	NA	63446306	63432303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
transcript_419.known	chr1	-	3112	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_6	241.646870453561	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-1399325	False	14990	-1	True	CATAAA	-17	NA	1399335	1385710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_41902.known	chr17	+	1367	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	260	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	84.3554191187139	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	63543237	True	NA	26	True	AATAAA	-27	NA	63550481	63594279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
transcript_41903.known	chr17	+	6324	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	26.2641496255934	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	63543232	True	NA	13	True	AATAAA	-14	NA	63550476	63594266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
transcript_41910.known	chr17	+	3959	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	84.0007826623614	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63769081	True	NA	11	True	AGTAAA	-17	NA	63774169	63819317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_41911.known	chr17	-	2195	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	254.412026622054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	-63755546	True	NA	-49	True	AATAAA	-17	NA	63773570	63746402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
transcript_41915.known	chr17	-	2166	13	FSM	ENSG00000266173.7	ENST00000336174.12	2166	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	59.7345982008938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	-63739631	True	NA	-23	True	ATTAAA	-25	NA	63741799	63702831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_41916.known	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_7	42.1178901022673	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-63755573	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_41918.known	chr17	-	2209	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	38.8174366545468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	-63739706	True	NA	-26	True	ATTAAA	-22	NA	63741874	63702834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_41919.known	chr17	-	2140	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	48.1857631318115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCATTGTGTCTG	-63739664	True	NA	-29	True	ATTAAA	-19	NA	63741832	63702837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
transcript_41920.known	chr17	-	1865	12	FSM	ENSG00000266173.7	ENST00000638276.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	52.4306704764642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGTGTGTGCCTCAT	-63739631	True	NA	NA	False	NA	NA	NA	63741799	63703012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_41922.known	chr17	-	1719	12	FSM	ENSG00000108588.15	ENST00000582252.1	1719	12	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	39.4978815207613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCGTGCCACACTGAGT	-63755546	True	NA	NA	False	AATAAA	-15	NA	63773570	63751769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_41924.known	chr17	-	1383	11	FSM	ENSG00000266173.7	ENST00000638309.1	1383	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	70.2638598427385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCCTGAGTGACAG	-63739628	True	NA	NA	False	NA	NA	NA	63741796	63704483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_41925.known	chr17	-	2153	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_9	39.3330649708359	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	-63739692	True	NA	-10	True	ATTAAA	-38	NA	63741860	63702818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_41926.known	chr17	-	2130	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	37.8181173513437	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	-63739693	True	NA	-10	True	ATTAAA	-38	NA	63741861	63702818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_41929.known	chr17	-	1925	11	FSM	ENSG00000266173.7	ENST00000640086.1	1925	11	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	53.933755663777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTTTCGTTGTCAG	-63739647	True	NA	-78	True	NA	NA	NA	63741815	63702886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_41933.known	chr17	-	1153	9	FSM	ENSG00000266173.7	ENST00000578008.6	1153	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	58.8828285665694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCCTCCCCAGATG	-63739601	True	NA	NA	False	NA	NA	NA	63741769	63704599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_41942.known	chr17	-	602	5	FSM	ENSG00000136490.9	ENST00000578993.5	602	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	495.420213051506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTTCCTGCTTCG	-63691793	True	NA	NA	False	NA	NA	NA	63700102	63698334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698819_63699027_63699070_63699256_63699349_63700031
transcript_41943.known	chr17	-	756	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	477.537433087711	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCCCTGGGAGGCCCC	-63699851	False	8309	NA	False	NA	NA	NA	63699861	63698288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
transcript_41945.known	chr17	-	3192	5	FSM	ENSG00000136490.9	ENST00000259006.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_4	97.0988542671848	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGAGCCAGCATGTCC	-63691816	True	NA	-29	True	AATAAA	-24	NA	63700125	63695887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700031
transcript_41948.known	chr17	-	566	5	FSM	ENSG00000136490.9	ENST00000584645.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	492.102377559792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAAGGAGCTCTGGGC	-63701162	False	NA	NA	False	NA	NA	NA	63701172	63698608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700983
transcript_41949.nic	chr17	-	1392	4	ISM	ENSG00000136490.9	ENST00000578061.5	756	5	291	-473	-208	0	3prime_fragment	FALSE	canonical	3	1058	junction_2	81.6551012218805	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	-63699560	False	NA	-18	True	AATAGA	-5	NA	63699570	63697815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256
transcript_41950.known	chr17	-	709	4	FSM	ENSG00000136490.9	ENST00000579814.1	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_3	104.156932878549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGGTGGGAAGGGGA	-63691823	True	NA	NA	False	NA	NA	NA	63700132	63698466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63699070_63699256_63699349_63700031
transcript_41951.known	chr17	-	2019	3	FSM	ENSG00000136490.9	ENST00000578067.5	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	49	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	-63691799	True	NA	-18	True	AATAGA	-5	NA	63700108	63697815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63699070_63699256
transcript_41954.known	chr17	-	3551	21	FSM	ENSG00000108592.17	ENST00000427159.7	3551	21	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_20	50.4825464888609	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTTTCTGACAGT	-63827649	False	20	-8	True	AATAAA	-16	NA	63827663	63819432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63819995_63820078_63820174_63820254_63820439_63820838_63820939_63821029_63821116_63821353_63821644_63821722_63821844_63821983_63822169_63823816_63823953_63824083_63824240_63824330_63824412_63824636_63824738_63824824_63824930_63825047_63825164_63825241_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835_63826929_63827051
transcript_4196.known	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	47.7229962910964	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-54405995	False	NA	-11	True	ATTAAA	-19	NA	54406008	54225432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_41966.known	chr17	+	1494	12	FSM	ENSG00000087191.13	ENST00000375812.8	1494	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	516.336971142485	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTGTTAATGAGG	63827658	False	NA	36	True	AATAAA	-25	NA	63827683	63832026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_41969.known	chr17	+	1331	12	FSM	ENSG00000087191.13	ENST00000310144.11	1331	12	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_7	196.823451535583	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	63810301	True	NA	29	True	AATAAA	-18	NA	63827430	63832019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_41970.known	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_12	239.746567580574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-63840920	False	4355	NA	False	NA	NA	NA	63842466	63832603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
transcript_41971.known	chr17	-	903	5	FSM	ENSG00000136487.18	ENST00000423893.7	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1.87082869338697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGACTAGGTGTCC	-63881918	True	NA	-3	True	AATAAA	-15	NA	63881944	63880214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63880519_63880771_63880937_63881028_63881149_63881358_63881520_63881791
transcript_41972.known	chr17	-	1138	4	FSM	ENSG00000136487.18	ENST00000332800.7	1138	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCATCATTTTGTTTGAC	-63881909	False	NA	-12	True	AATAAA	-6	NA	63881935	63880223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63880937_63881028_63881149_63881358_63881520_63881791
transcript_41973.known	chr17	-	1246	6	FSM	ENSG00000007312.13	ENST00000006750.8	1246	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	6.93974062915899	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63932237	True	NA	-3	True	AATAAA	-21	NA	63932331	63928739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931386_63932194
transcript_41974.known	chr17	-	1254	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	4.81663783151692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63932242	True	NA	-3	True	AATAAA	-21	NA	63932336	63928739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
transcript_41975.nic	chr17	-	1142	5	ISM	ENSG00000007312.13	ENST00000006750.8	1246	6	913	0	843	0	3prime_fragment	TRUE	canonical	3	14	junction_3	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63931324	False	NA	-3	True	AATAAA	-21	NA	63931418	63928739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334
transcript_41976.known	chr17	-	1159	4	FSM	ENSG00000007312.13	ENST00000559358.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATAAACGGTGTGTCCTG	-63930420	False	NA	-31	True	NA	NA	NA	63930514	63928767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073
transcript_41977.known	chr17	-	1135	5	FSM	ENSG00000108622.11	ENST00000579788.6	1135	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGCCCACAGTGTCT	NA	False	NA	1	True	AATACA	-15	NA	64020633	64002594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64002926_64003643_64003965_64005106_64005374_64006630_64006736_64020522
transcript_41978.known	chr17	-	1364	2	FSM	ENSG00000264954.2	ENST00000662204.1	1364	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACATGTGTGTATGTAC	-63998970	True	NA	NA	False	NA	NA	NA	63998980	63996047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63997264_63998832
transcript_41979.known	chr17	-	4833	2	FSM	ENSG00000178607.17	ENST00000680493.1	4833	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTCTAGTCTATGGTA	-64129561	True	NA	NA	False	AATAAA	-13	NA	64130059	64093492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64098242_64129975
transcript_41980.known	chr17	+	278	2	FSM	ENSG00000266402.4	ENST00000582965.2	290	2	12	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTCCGGCTGCTAG	64141718	True	NA	28	True	NA	NA	NA	64145969	64146476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_64146001_64146229
transcript_41981.known	chr17	+	106	2	FSM	ENSG00000266402.4	ENST00000580828.1	106	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCGGTGTGTGTC	64141718	True	NA	28	True	AATAAA	-16	NA	64145969	64146309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_64145996_64146229
transcript_41984.known	chr17	-	1557	9	FSM	ENSG00000256525.8	ENST00000671755.1	1557	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	78.1824788555595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	-64496531	False	NA	-27	True	NA	NA	NA	64496939	64477811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64483389_64483507_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_41989.known	chr17	-	1582	8	FSM	ENSG00000256525.8	ENST00000539111.7	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	30.4429878659123	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-64496646	False	20761	0	True	AATAAA	-17	NA	64497054	64477784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_4199.known	chr1	+	1483	7	FSM	ENSG00000116221.15	ENST00000360840.9	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_2	37.1468557066259	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTGGTATGAGGG	54180124	True	NA	23	True	AATAAA	-22	NA	54200166	54218383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54218171
transcript_41990.nic	chr17	-	1463	8	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	66.7914817983276	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-64496652	False	20761	0	True	AATAAA	-17	NA	64497060	64477784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496531
transcript_41995.nic	chr17	-	1480	7	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	60.8515954323851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTGTCTTATGTTC	-64496647	False	20761	-2	True	AATAAA	-15	NA	64497055	64477786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_64477989_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_41997.nic	chr17	-	1064	4	ISM	ENSG00000256525.8	ENST00000585141.5	1731	5	-28	5622	7	82	5prime_fragment	FALSE	canonical	3	144	junction_3	18.6607133363712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTATGTATTTTTTACC	-64496639	False	20761	NA	False	NA	NA	NA	64497047	64490779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_64490970_64492666_64492773_64492894_64493022_64496406
transcript_41998.known	chr17	-	565	4	FSM	ENSG00000256525.8	ENST00000578997.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	73.7744309816529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGTGGAACCTAGGAGA	-64496737	False	NA	NA	False	AATAGA	-2	NA	64496755	64490861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64490970_64492666_64492773_64492894_64493022_64496531
transcript_41999.known	chr17	+	2754	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_4	54.2678286825344	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	64505939	True	NA	14	True	AATAAA	-16	NA	64506976	64537946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
transcript_42.known	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00112_+_0_1100
transcript_42009.known	chr17	-	4747	14	FSM	ENSG00000108654.16	ENST00000677726.1	4747	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	1317.3856125186	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	-64506482	False	408	-11	True	AATAAA	-13	NA	64506521	64498258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64501260_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42010.known	chr17	-	3998	14	FSM	ENSG00000108654.16	ENST00000678814.1	3998	14	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	1311.4695131888	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	-64506482	False	408	-11	True	AATAAA	-13	NA	64506521	64498258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42011.known	chr17	-	3868	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_13	986.46349992607	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	-64506692	False	NA	-10	True	AATAAA	-14	NA	64506731	64498257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
transcript_42012.known	chr17	-	4461	14	FSM	ENSG00000108654.16	ENST00000585111.2	4461	14	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_13	980.47334299886	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	-64507523	True	NA	-10	True	AATAAA	-14	NA	64507562	64498257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754
transcript_42019.known	chr17	-	2021	13	FSM	ENSG00000108654.16	ENST00000578804.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_12	1007.67698679796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATGTAAATGTCTGTT	-64505917	False	NA	NA	False	NA	NA	NA	64505956	64499913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
transcript_4202.known	chr1	+	1582	7	FSM	ENSG00000116221.15	ENST00000605337.5	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	595.281352713899	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACATATATCGTACACA	54180153	True	NA	-3	True	AATAAA	-6	NA	54200195	54225464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54225124
transcript_42020.known	chr17	-	3684	13	FSM	ENSG00000108654.16	ENST00000225792.10	3684	13	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_10	216.490232651114	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64485528	True	NA	-6	True	AATAAA	-18	NA	64506289	64498253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42023.known	chr17	-	4283	13	FSM	ENSG00000108654.16	ENST00000676969.1	4283	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1013.52776026774	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTTTTTATTTA	-64506482	False	408	-9	True	AATAAA	-15	NA	64506521	64498256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42024.known	chr17	-	5535	14	FSM	ENSG00000108654.16	ENST00000678890.1	5535	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1331.70709504089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTTTTTATTTA	-64507523	True	NA	-9	True	AATAAA	-15	NA	64507562	64498256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754_64507315_64507477
transcript_42031.known	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_9	198.690922401171	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-64485528	True	NA	-4	True	AATAAA	-23	NA	64506289	64499615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42038.known	chr17	-	5342	11	FSM	ENSG00000108654.16	ENST00000678810.1	5342	11	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_8	206.773039828697	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTTTTTATTTA	-64506460	False	NA	-9	True	AATAAA	-15	NA	64506499	64498256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64502070_64502161_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42042.known	chr17	-	1168	6	FSM	ENSG00000214176.10	ENST00000584585.2	1191	6	20	3	3	0	multi-exon	FALSE	canonical	1	3	junction_1	8.22192191643779	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAGATAATCTTTTT	-64836408	True	NA	NA	False	AATAAA	-37	NA	64837136	64820693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64821018_64821766_64822053_64822253_64822394_64824624_64824873_64829160_64829250_64837055
transcript_42056.nnic	chr17	-	1069	6	FSM	ENSG00000214174.9	ENST00000693419.1	1068	6	-13	12	-1	0	multi-exon	FALSE	canonical	3	39	junction_5	74.8668150785113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973992	True	NA	70	True	AATAAA	-15	NA	64975618	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64975559
transcript_42058.nnic	chr17	-	1148	6	FSM	ENSG00000214174.9	ENST00000690225.1	1128	6	-22	2	0	0	multi-exon	FALSE	canonical	3	9	junction_5	91.0836977729824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973991	True	NA	70	True	AATAAA	-15	NA	64975617	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974950_64975118_64975559
transcript_42068.nnic	chr17	-	992	6	FSM	ENSG00000214174.9	ENST00000693419.1	1068	6	-13	89	-1	-4	multi-exon	FALSE	canonical	3	39	junction_5	74.8668150785113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGACTAGAACCTTCT	-64973992	True	NA	-7	True	AATAAA	-25	NA	64975618	64968114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64975559
transcript_42076.nnic	chr17	-	1004	5	FSM	ENSG00000214174.9	ENST00000691709.1	975	5	-31	2	-13	0	multi-exon	FALSE	canonical	3	13	junction_4	95.6882960450232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64974004	True	NA	70	True	AATAAA	-15	NA	64975630	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973231_64973518_64975559
transcript_42078.nnic	chr17	-	994	5	FSM	ENSG00000214174.9	ENST00000690715.1	993	5	-13	12	-13	0	multi-exon	FALSE	canonical	3	13	junction_4	85.9156563147835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64974004	True	NA	70	True	AATAAA	-15	NA	64975630	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64975559
transcript_42080.nnic	chr17	-	793	5	NIC	ENSG00000214174.9	novel	1068	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	90.7331251528349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973992	True	NA	70	True	AATAAA	-15	NA	64975618	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_64968382_64972533_64972663_64972753_64972928_64974554_64974642_64975559
transcript_42085.nnic	chr17	-	917	5	FSM	ENSG00000214174.9	ENST00000690715.1	993	5	-13	89	-13	-4	multi-exon	FALSE	canonical	3	13	junction_4	85.9156563147835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGACTAGAACCTTCT	-64974004	True	NA	-7	True	AATAAA	-25	NA	64975630	64968114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64975559
transcript_4209.known	chr1	+	1179	5	FSM	ENSG00000116221.15	ENST00000336230.10	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	708.875870657198	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTTTGGTATGAG	54180124	True	NA	21	True	AATAAA	-20	NA	54200166	54218381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54200590_54209947_54210132_54212500_54212659_54216140_54216345_54218171
transcript_42092.nnic	chr17	-	708	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-3	12	-3	0	multi-exon	FALSE	canonical	3	35	junction_3	86.3185315496556	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973994	True	NA	70	True	AATAAA	-15	NA	64975620	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_42094.nnic	chr17	-	689	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-61	89	-61	-4	multi-exon	FALSE	canonical	3	35	junction_3	86.3185315496556	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGACTAGAACCTTCT	-64975651	False	NA	-7	True	AATAAA	-25	NA	64975678	64968114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_42098.known	chr17	-	2259	4	FSM	ENSG00000214174.9	ENST00000397713.5	2259	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	70.517137396995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973950	True	NA	70	True	AATAAA	-15	NA	64975576	64968037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64973518_64974554
transcript_421.known	chr1	+	1747	3	FSM	ENSG00000224870.8	ENST00000444362.3	1759	3	12	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTCTTTTCCTAATC	1397618	True	NA	27	True	TATAAA	-20	NA	1399526	1402046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399686_1400157_1400304_1400604
transcript_42100.known	chr17	+	2736	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	2	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	65099038	True	NA	16	True	TATAAA	-19	NA	65100811	65113130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_65101043_65101206_65101297_65110715
transcript_42101.known	chr17	+	563	2	FSM	ENSG00000108370.17	ENST00000582940.2	563	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAATTCCTTAGCA	65099104	True	NA	27	True	AATAAA	-19	NA	65100877	65111113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_65101043_65110715
transcript_42103.known	chr17	-	3447	27	FSM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	4.58725401610637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCTACTTTTTAT	-66191449	True	NA	3	True	ATTAAA	-21	NA	66192133	65635536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_42106.nic	chr17	-	927	6	ISM	ENSG00000154240.17	ENST00000535342.7	3447	27	39	494030	-10	47087	5prime_fragment	FALSE	canonical	3	13	junction_3	2.72763633939717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCTGTCCCCAACAAG	-66191410	True	NA	NA	False	AATAAA	-24	NA	66192094	66129566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_42113.known	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	64.8617761088917	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	-67344884	True	NA	-1	True	AATAAA	-20	NA	67366577	67337915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_42126.known	chr17	+	6182	10	FSM	ENSG00000154217.16	ENST00000580974.5	6182	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	92.2433710689979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	67377362	True	NA	8	True	AATAAA	-17	NA	67377458	67697256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_42127.nic	chr17	+	1551	10	NIC	ENSG00000154217.16	novel	1735	7	NA	NA	-18	-443	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	113.737297486384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTTTT	67378928	False	NA	36	True	TATAAA	-26	NA	67378947	67692924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_67379393_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_42128.nnic	chr17	+	1188	10	NNC	ENSG00000154217.16	novel	1735	7	NA	NA	-30412	-443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.737297486384	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTTTT	NA	False	NA	36	True	TATAAA	-26	NA	67502492	67692924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_67502575_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_42129.known	chr17	+	6241	9	FSM	ENSG00000154217.16	ENST00000581322.6	6241	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.890057418826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	67374329	True	NA	8	True	AATAAA	-17	NA	67377280	67697256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
transcript_42138.known	chr17	+	2844	18	FSM	ENSG00000130935.10	ENST00000253247.9	2844	18	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_10	65.1180987284405	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAATCTCTCAGTA	67706561	True	NA	3	True	AATAAA	-15	NA	67717935	67744531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_67718089_67719673_67719788_67719905_67719963_67721377_67721527_67722579_67722638_67724048_67724194_67726459_67726649_67734362_67734440_67735899_67736024_67736665_67736755_67737070_67737146_67737507_67737693_67737846_67737973_67738121_67738356_67738931_67739011_67739515_67739609_67743478_67743587_67743742
transcript_4214.nic	chr1	-	821	4	ISM	ENSG00000215883.11	ENST00000528287.5	2642	8	6	17333	0	0	5prime_fragment	FALSE	canonical	3	49	junction_3	2.62466929133727	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGCATTTACTATC	-54198577	True	NA	-3	True	AATAAA	-15	NA	54200030	54190550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_54190897_54195418_54195716_54196368_54196492_54199975
transcript_4215.known	chr1	-	1975	8	FSM	ENSG00000162391.12	ENST00000302250.7	1975	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTATGTGAGTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	54623525	54609180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54609942_54610411_54610556_54611605_54611746_54612485_54612711_54614699_54614860_54616019_54616173_54619863_54620008_54623277
transcript_42158.known	chr17	-	1082	3	FSM	ENSG00000186665.10	ENST00000449250.3	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	22	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATAAAAAATAGT	-67991524	True	NA	NA	False	ATTAAA	-5	NA	67993545	67991335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_67992104_67993043_67993236_67993423
transcript_4216.known	chr1	+	2356	10	FSM	ENSG00000243725.7	ENST00000371281.4	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_8	26.7913750632135	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTAATTTGAGGCTGG	54713607	True	NA	25	True	AGTAAA	-26	NA	54715860	54742657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_42160.known	chr17	-	1535	3	FSM	ENSG00000186665.10	ENST00000334461.7	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCAATAAATCTTGAC	-67993639	False	NA	-37	True	NA	NA	NA	67993649	67991129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_67992104_67992900_67993236_67993423
transcript_42162.known	chr17	+	1977	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	282.770596066847	4138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979121	True	NA	19	True	AATAAA	-30	NA	68035734	68046854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_42163.known	chr17	+	2082	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	0	0	0	0	multi-exon	FALSE	canonical	3	4248	junction_4	279.890631197435	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979116	True	NA	19	True	AATAAA	-30	NA	68035729	68046854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_42164.known	chr17	-	672	3	FSM	ENSG00000265055.2	ENST00000579629.2	672	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTAATGAGTGTGG	-68101452	True	NA	54	True	ATTAAA	-30	NA	68101496	68096045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_68096479_68100551_68100709_68101414
transcript_42165.known	chr17	-	432	2	FSM	ENSG00000265055.2	ENST00000584047.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTTTGTTTATATAC	-68101425	True	NA	-2	True	AATAAA	-17	NA	68101469	68096101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_68096479_68101414
transcript_4217.known	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-54762682	True	NA	-5	True	AATAAA	-16	NA	54764523	54756897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54759191_54764460
transcript_42171.known	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	255.799267602787	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	68243044	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42175.known	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	256.145048193959	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	68243052	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_4218.known	chr1	-	4233	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_3	139.13010996905	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCGTTTCTTGCTTGG	-54836639	True	NA	-7	True	AATAAA	-19	NA	54887195	54849626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_42184.nic	chr17	+	1413	8	NIC	ENSG00000196704.14	novel	1498	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	298.749707539777	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	68243042	True	NA	20	True	AATAAA	-17	NA	68248032	68257155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_68248111_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42187.known	chr17	+	1498	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	316.7969155694	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	68243013	True	NA	29	True	AATAAA	-26	NA	68248003	68257164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42193.known	chr17	+	1932	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	42.4368812342388	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	68243052	True	NA	20	True	AATAAA	-17	NA	68248042	68257155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42200.known	chr17	+	1722	6	FSM	ENSG00000196704.14	ENST00000359783.8	1722	6	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_2	350.375798250964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	68243060	True	NA	-8	True	AATGAA	-8	NA	68248050	68257127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248706_68250187_68250471_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42206.known	chr17	+	2005	1	FSM	ENSG00000274712.2	ENST00000614046.1	2005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAGGAAAAAGGACCC	68205111	True	NA	9	True	AATAAA	-16	NA	68205488	68207493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68205500_68207500
transcript_42207.known	chr17	-	1310	1	FSM	ENSG00000265100.1	ENST00000577698.1	1310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGACTGTTCTCAAAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	68247938	68246628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_68246600_68247900
transcript_42209.known	chr17	+	2554	12	FSM	ENSG00000141337.13	ENST00000621439.5	2554	12	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_10	6.47053078155427	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAGAGCAGACATT	68290819	True	NA	NA	False	AATAAA	-29	NA	68291494	68420814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68291569_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_4221.known	chr1	+	3637	12	FSM	ENSG00000169174.11	ENST00000302118.5	3637	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_6	21.632543589434	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	55035316	True	NA	19	True	AATAAA	-22	NA	55039547	55064852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_42210.known	chr17	-	1908	13	FSM	ENSG00000070540.13	ENST00000262139.10	1908	13	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_5	30.5053501682719	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGGTTTTTATATAT	-68456219	True	NA	-15	True	AATAAA	-15	NA	68457496	68421280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_42213.known	chr17	+	3697	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	629.978354606511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	68495379	True	NA	NA	False	AATAAA	-21	NA	68512449	68532762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42215.known	chr17	+	3576	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_1	470.922329052255	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	68509958	True	NA	NA	False	AATAAA	-21	NA	68512031	68532762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42219.known	chr17	+	4253	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	0	0	0	0	multi-exon	FALSE	canonical	3	1318	junction_10	163.3	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGGGTTGACAGTCC	68495359	True	NA	NA	False	AATAAA	-17	NA	68512429	68533431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_4222.known	chr1	+	9355	9	FSM	ENSG00000162409.12	ENST00000371244.9	9355	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	6.06088896120033	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTGCTCCATCA	56643249	True	NA	22	True	ATTAAA	-25	NA	56645313	56715335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_56645482_56674380_56674523_56691393_56691488_56692357_56692503_56693764_56693853_56695934_56696160_56703970_56704476_56706091_56706219_56707474
transcript_42221.nic	chr17	+	1379	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_10	449.667254756225	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68510311	False	NA	18	True	AATAAA	-25	NA	68512384	68551319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_42225.known	chr17	+	4327	11	FSM	ENSG00000108946.16	ENST00000392711.5	4327	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	496.040159664517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	68510305	False	NA	NA	False	AATAAA	-9	NA	68512378	68533423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512580_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42230.known	chr17	+	556	2	FSM	ENSG00000108946.16	ENST00000592194.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAATTCTTTGTAACTT	68495344	True	NA	NA	False	AATAAA	-8	NA	68512414	68515815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68515393
transcript_42235.known	chr17	+	3551	11	FSM	ENSG00000108946.16	ENST00000392710.8	3551	11	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	483.640320899736	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAATGAATCAGT	68495379	True	NA	NA	False	AATAAA	-18	NA	68512449	68532759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68515393_68515567_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42236.known	chr17	+	1209	10	FSM	ENSG00000108946.16	ENST00000588188.6	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_9	472.948904921733	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68515330	True	NA	18	True	AATAAA	-25	NA	68515399	68551319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_42237.known	chr17	-	3017	21	FSM	ENSG00000154265.16	ENST00000593153.5	3017	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.27901857906693	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGCTGGTGAGAGT	-69327089	True	NA	NA	False	CATAAA	-23	NA	69327182	69273970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_69274129_69277640_69277843_69283952_69284073_69285897_69286038_69286220_69286312_69287612_69287752_69289176_69289297_69289861_69290038_69291215_69291327_69294654_69294714_69297190_69297360_69301138_69301287_69302717_69302907_69304668_69304811_69306724_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69325698_69325818_69327051
transcript_42239.known	chr17	+	1851	12	FSM	ENSG00000108984.15	ENST00000359094.7	1851	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	34.0510069510457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTCTTCTGACACTTG	69412013	False	NA	NA	False	AGTAAA	-4	NA	69414833	69542510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517552_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_42242.known	chr17	+	13405	12	FSM	ENSG00000108984.15	ENST00000590474.7	13405	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	14.5044877637666	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTACATTAATTG	69411876	True	NA	19	True	AATAAA	-20	NA	69414696	69553865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_42247.known	chr17	+	1512	12	FSM	ENSG00000108984.15	ENST00000589647.5	1512	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	32.649655434629	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAAGCTTCTCAGACTT	69502251	False	NA	38	True	ATTAAA	-24	NA	69502428	69542019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69502686_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_42250.known	chr17	+	1542	7	FSM	ENSG00000108984.15	ENST00000586641.5	1542	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	11.4515889242013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCTTAGAAATATGAAAG	69411890	True	NA	NA	False	GATAAA	-33	NA	69414710	69521833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048
transcript_42251.known	chr17	+	562	4	FSM	ENSG00000237560.8	ENST00000654068.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGGTCGTTCGTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	69961672	69983544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69961838_69981270_69981374_69982328_69982463_69983384
transcript_42255.known	chr17	+	3684	3	FSM	ENSG00000256124.6	ENST00000472655.4	3684	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATTCTGTGGTTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	72030560	72041310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_72030852_72037044_72037132_72038004
transcript_42257.known	chr17	-	1165	5	FSM	ENSG00000234899.11	ENST00000656392.1	1165	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCCTTTCTAAACATTT	-72120764	True	NA	NA	False	NA	NA	NA	72120807	72075913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72076734_72081920_72082042_72083905_72084029_72084989_72085046_72120762
transcript_42259.known	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.000561160071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-73090957	True	NA	-18	True	AATAAA	-16	NA	73092688	72645949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42260.known	chr17	-	2737	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	33	junction_5	13.3287028996694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-73090962	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42265.known	chr17	-	1004	7	FSM	ENSG00000133195.12	ENST00000579732.5	1004	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24.7835070605881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	-73090950	True	NA	-3	True	TTTAAA	-16	NA	73092681	72837799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72838121_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42266.known	chr17	+	3618	6	FSM	ENSG00000141219.16	ENST00000535032.7	3618	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	45.4110118803799	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCTGAGCTGATTA	73231671	True	NA	15	True	AATAAA	-22	NA	73232432	73248959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_42268.known	chr17	+	2075	6	FSM	ENSG00000141219.16	ENST00000426147.6	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	61.9645059691433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATACAGGAAGTAAACG	73229486	True	NA	NA	False	AATAAA	-26	NA	73232661	73245344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73245167
transcript_42269.known	chr17	+	3645	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	28.5418990258182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	73231860	False	NA	3	True	AATAAA	-10	NA	73232621	73248947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_42271.known	chr17	+	2163	5	FSM	ENSG00000141219.16	ENST00000255557.8	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	66.3871222452066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATGATACAGGAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	73232232	73245339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73245167
transcript_42273.known	chr17	+	3449	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	51.8766566000547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	73231875	False	NA	17	True	AATAAA	-13	NA	73232636	73248874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_42276.known	chr17	-	2865	4	FSM	ENSG00000133193.13	ENST00000405159.8	2876	4	23	-12	-4	0	multi-exon	FALSE	canonical	3	89	junction_2	156.942310703293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	73232371	73207352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73209769_73212677_73212741_73227164_73227265_73232085
transcript_42279.known	chr17	-	2798	3	FSM	ENSG00000133193.13	ENST00000403627.7	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	18.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	73232367	73207352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73209769_73227164_73227265_73232085
transcript_42282.known	chr17	+	7685	2	FSM	ENSG00000180616.9	ENST00000357585.4	7685	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGCGTATGTCTT	73164564	True	NA	NA	False	ATTAAA	-21	NA	73165009	73176633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73165289_73169227
transcript_42283.known	chr17	-	512	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTACAGCACCGAG	NA	False	NA	NA	False	NA	NA	NA	73232394	73209565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73209769_73232085
transcript_42286.known	chr17	-	3098	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-73311227	True	NA	-2	True	ATTAAA	-18	NA	73312001	73283623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73286613_73311892
transcript_42288.known	chr17	+	431	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	6336.68514978455	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	74203560	False	NA	15	True	ATTAAA	-17	NA	74203581	74209880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_4229.nnic	chr1	-	685	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-16	1408	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	35.2230984819148	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57422495	True	NA	NA	False	AATAAA	-18	NA	57424076	57144008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
transcript_42291.known	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6671.64312594731	8757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	74128530	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
transcript_42295.known	chr17	+	429	4	FSM	ENSG00000172809.13	ENST00000534490.5	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	11154	junction_1	2453.32880434365	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATTCTCAGATTATAT	74128531	True	NA	NA	False	NA	NA	NA	74203693	74209461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186
transcript_42297.known	chr17	+	576	3	FSM	ENSG00000172809.13	ENST00000529123.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	11154	junction_1	2735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCGAGCACGGCACACT	74128512	True	NA	NA	False	AATAAA	-22	NA	74203674	74204593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203746_74203917_74203959_74204129
transcript_42298.known	chr17	+	532	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	12347	junction_3	1894.3465012153	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	74128541	True	NA	31	True	ATTAAA	-33	NA	74203703	74209896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
transcript_42299.known	chr17	+	1592	4	FSM	ENSG00000170412.18	ENST00000481232.2	1592	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	29.2232783924049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74431506	False	NA	13	True	AATAAA	-20	NA	74431527	74447429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74432142_74439744_74440047_74443817_74443913_74446848
transcript_423.known	chr1	+	1748	3	FSM	ENSG00000224870.8	ENST00000448629.7	1759	3	1	10	1	0	multi-exon	FALSE	canonical	3	37	junction_1	39	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATTACTCTGTCTCT	1397611	True	NA	17	True	TATAAA	-10	NA	1399519	1402036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399690_1400157_1400304_1400604
transcript_42300.known	chr17	+	1813	4	FSM	ENSG00000170412.18	ENST00000392627.7	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	24.5266295188629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74431555	True	NA	13	True	AATAAA	-20	NA	74432087	74447429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
transcript_42301.nic	chr17	+	1785	4	NIC	ENSG00000170412.18	novel	2317	4	NA	NA	365	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	20.2868320729373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74432449	True	NA	13	True	AATAAA	-20	NA	74432497	74447429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_74432524_74439744_74440828_74443817_74443913_74446848
transcript_42302.known	chr17	+	393	3	FSM	ENSG00000170412.18	ENST00000582873.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGACTCTCCAGGCTC	74443065	False	NA	NA	False	NA	NA	NA	74443076	74447088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74443135_74443817_74443913_74446848
transcript_42303.known	chr17	+	1638	7	FSM	ENSG00000167851.15	ENST00000360141.8	1638	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	74466542	False	NA	7	True	AGTAAA	-16	NA	74466633	74484794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_42304.known	chr17	+	631	6	FSM	ENSG00000167851.15	ENST00000310828.9	631	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.19523539268061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCAGGGACAGCTCC	74466583	False	NA	NA	False	NA	NA	NA	74466674	74484167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74466744_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_42305.known	chr17	+	1785	7	FSM	ENSG00000167851.15	ENST00000648095.1	1785	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	74466307	True	NA	7	True	AGTAAA	-16	NA	74466398	74484794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74466656_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_42306.known	chr17	+	1993	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	15.107613974417	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	74740932	True	NA	9	True	NA	NA	NA	74748627	74769353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
transcript_42318.known	chr17	-	583	7	FSM	ENSG00000109065.12	ENST00000583476.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	107.008826219564	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAGAAGCCTTACAGA	-74773187	True	NA	NA	False	NA	NA	NA	74776337	74771767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74771978_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_42319.known	chr17	-	1011	7	FSM	ENSG00000109065.12	ENST00000581136.5	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	95.0327428953949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTTTCTCCTTAGAG	-74773174	True	NA	NA	False	NA	NA	NA	74776324	74771388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772040_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_42322.nnic	chr17	-	1865	7	NNC	ENSG00000109065.12	novel	1907	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	94.9679770589364	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	-74772993	False	NA	0	True	TATAAA	-38	NA	74776143	74770528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776103
transcript_42323.known	chr17	-	1860	7	FSM	ENSG00000109065.12	ENST00000580301.5	1860	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	30.0152738895827	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAACATTATAAAACGAA	-74773189	True	NA	-38	True	AAAACA	-14	NA	74776339	74770566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42324.known	chr17	-	839	7	FSM	ENSG00000109065.12	ENST00000578822.5	839	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	104.963088750284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGGTGTTGGGCCC	-74773148	True	NA	NA	False	NA	NA	NA	74776298	74771694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775853_74776266
transcript_42339.known	chr17	-	1993	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	16.9587735405601	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCTCAGTATAAAACAAA	-74773173	True	NA	-52	True	NA	NA	NA	74776323	74770580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42341.nic	chr17	-	2213	6	NIC	ENSG00000109065.12	novel	1103	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	46	junction_2	92.0738833763408	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	NA	False	NA	0	True	TATAAA	-38	NA	74776373	74770528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_74771859_74771959_74772396_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42346.known	chr17	-	573	6	FSM	ENSG00000109065.12	ENST00000582524.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	97.3188573710152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCCTTACAGAGATG	NA	False	NA	NA	False	NA	NA	NA	74776365	74771763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771835_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_42356.known	chr17	+	1740	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	37.8270919961988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	74774001	True	NA	19	True	AATAAA	-13	NA	74776499	74839751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_42360.nic	chr17	+	1009	5	ISM	ENSG00000109066.14	ENST00000582773.5	1740	10	-25	48962	-24	-4800	5prime_fragment	FALSE	canonical	3	98	junction_3	20.9448681065315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTTAAACCATG	74773976	True	NA	NA	False	NA	NA	NA	74776474	74790789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199
transcript_42364.nnic	chr17	-	1921	12	NNC	ENSG00000161513.12	novel	1846	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	77.7178622692524	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGTTGATGGGGGACT	-74871254	True	NA	-3	True	AATAAA	-17	NA	74873039	74862496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_74862948_74863045_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_42367.known	chr17	-	1766	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	78.1328599351956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGGTTGGGAACATG	-74871200	True	NA	-50	True	NA	NA	NA	74872985	74862543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
transcript_42368.known	chr17	-	2482	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	93.4707272866973	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGTTGATGGGGGA	-74871221	True	NA	-5	True	AATAAA	-15	NA	74873006	74862498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
transcript_42369.known	chr17	-	1846	12	FSM	ENSG00000161513.12	ENST00000293195.10	1846	12	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	27.8973916847062	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGTTGATGGGGGACT	-74871209	True	NA	-3	True	AATAAA	-17	NA	74872994	74862496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_42370.known	chr17	-	1967	12	FSM	ENSG00000161513.12	ENST00000442102.6	1967	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	78.6376773405768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTTGGGAACATGCT	-74871246	True	NA	-48	True	NA	NA	NA	74873031	74862541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74867006_74872035_74872134_74872865
transcript_42371.known	chr17	-	1827	12	FSM	ENSG00000161513.12	ENST00000581530.5	1827	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	78.0350631087088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCATGGTTGATGGGG	-74871176	True	NA	-7	True	AATAAA	-13	NA	74872961	74862500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864950_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_42372.known	chr17	-	1762	11	FSM	ENSG00000161513.12	ENST00000583917.5	1762	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.245947549016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAGCTGCAACCAAG	-74871230	True	NA	-24	True	NA	NA	NA	74873015	74862517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864346_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
transcript_42375.known	chr17	-	1705	11	FSM	ENSG00000161513.12	ENST00000420580.6	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	98.9213829260388	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTTGATGGGGGAC	-74871189	True	NA	-4	True	AATAAA	-16	NA	74872974	74862497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866783_74866880_74872035_74872134_74872865
transcript_4238.nic	chr1	-	1907	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	50.8574908445157	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545475	True	NA	1	True	AATAAA	-19	NA	58546704	58480718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546634
transcript_42386.known	chr17	-	1561	10	FSM	ENSG00000161513.12	ENST00000583881.5	1561	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	122.954171930284	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGTTGATGGGGGACT	-74871228	True	NA	-3	True	AATAAA	-17	NA	74873013	74862496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74864147_74864348_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866880_74872035_74872108_74872865
transcript_42387.known	chr17	-	2174	6	FSM	ENSG00000172782.13	ENST00000612771.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.01980390271856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAACTTTGAATGT	-74893617	False	NA	NA	False	AATAAA	-40	NA	74893633	74877301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74878478_74879403_74879584_74881067_74881256_74882529_74882711_74892522_74892690_74893351
transcript_42389.known	chr17	-	3298	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_16	13.752665286014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	-74971239	True	NA	-3	True	AATAAA	-16	NA	74972759	74950741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_4239.nic	chr1	-	1926	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	37.2323783822629	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545523	True	NA	1	True	AATAAA	-19	NA	58546752	58480718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_42391.nic	chr17	-	1747	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-1	7227	-1	0	5prime_fragment	FALSE	canonical	2	72	junction_9	13.8456664461789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATCTATCATCAT	-74971240	True	NA	NA	False	ATTAAA	-27	NA	74972760	74957968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_42395.known	chr17	+	593	6	FSM	ENSG00000167862.10	ENST00000584208.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	107.961845112058	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGCTGAGACAAAAGAG	75007028	True	NA	NA	False	AAAACA	-9	NA	75012669	75020939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020466_75020658_75020920
transcript_42396.known	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	19.9138143006306	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	75007028	True	NA	10	True	AATAAA	-13	NA	75012669	75021261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
transcript_4240.nic	chr1	-	1941	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	43.7914089748206	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545564	True	NA	1	True	AATAAA	-19	NA	58546793	58480718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
transcript_42408.known	chr17	-	609	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	2775	junction_5	366.032457577194	4088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-75011759	True	NA	-11	True	ATTAAA	-16	NA	75046969	75038862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
transcript_42409.known	chr17	-	553	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1482.69338957857	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-75011775	True	NA	-11	True	ATTAAA	-16	NA	75046985	75038862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
transcript_4241.known	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	52.1019133525824	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545497	True	NA	1	True	AATAAA	-19	NA	58546726	58480718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_42413.known	chr17	-	653	5	FSM	ENSG00000125458.7	ENST00000582170.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	259.019666241774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTGGAGCTAAAGG	-75123255	True	NA	NA	False	NA	NA	NA	75131744	75130472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130638_75130752_75130868_75131044_75131106_75131180_75131282_75131533
transcript_42414.known	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	259.265629551367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	-75131462	False	NA	-49	True	AATACA	-4	NA	75131473	75130270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
transcript_42415.known	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	15.9652400197707	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	-75131435	False	NA	-3	True	AATAAA	-20	NA	75131446	75130224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
transcript_42416.known	chr17	+	1204	3	FSM	ENSG00000125449.7	ENST00000582136.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	17.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTCTTGTGTTTAT	75108846	True	NA	12	True	AATGAA	-27	NA	75109977	75114826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75110380_75110462_75110607_75114168
transcript_42417.known	chr17	+	2151	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	3	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	75108837	True	NA	70	True	ATTAAA	-21	NA	75109968	75130272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75110380_75110462_75110607_75128676
transcript_42418.known	chr17	-	1315	3	FSM	ENSG00000125458.7	ENST00000583655.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	-75123260	True	NA	-6	True	AATAAA	-17	NA	75131749	75130227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75130964
transcript_42419.known	chr17	-	776	3	FSM	ENSG00000125458.7	ENST00000577523.5	776	3	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAAGCGCTGTGCTACCG	-75131414	False	NA	NA	False	NA	NA	NA	75131425	75130362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75131044
transcript_42420.known	chr17	-	1633	6	FSM	ENSG00000189159.16	ENST00000304834.11	1633	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	960.070705729531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTACTTCACAATCCT	NA	False	NA	-65	True	NA	NA	NA	75154675	75135306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75149090_75149186_75154341
transcript_42429.known	chr17	-	490	4	FSM	ENSG00000188612.12	ENST00000578238.2	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	1983.26011069317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAGATTACATTCTCA	-75182536	False	69853	NA	False	NA	NA	NA	75182563	75168297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182381
transcript_4243.nnic	chr1	-	1409	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	12	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	55.374052716825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545561	True	NA	1	True	AATAAA	-19	NA	58546790	58480718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58546702
transcript_42431.known	chr17	-	1434	5	FSM	ENSG00000189159.16	ENST00000409753.8	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	1884	junction_3	62.9166114790045	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTACTGTGTCTTCT	-75109722	True	NA	-6	True	AGTAAA	-20	NA	75154512	75135247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75154341
transcript_42432.known	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3634	junction_3	361.719043826375	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	-75113106	True	NA	-1	True	AATATA	-17	NA	75182959	75165585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
transcript_42434.known	chr17	+	2133	19	FSM	ENSG00000125450.11	ENST00000245544.9	2133	19	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	59.1678925277286	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTAGAGTCCACCCAG	75201276	True	NA	27	True	AATAAA	-19	NA	75205678	75235758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_42446.known	chr17	+	1890	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	123.906008578833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	75201317	True	NA	-40	True	NA	NA	NA	75205719	75235691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_42448.known	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	125.74483967894	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	75201304	True	NA	26	True	AATAAA	-18	NA	75205706	75235757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_42456.known	chr17	+	2233	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	123.203195347158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	75201317	True	NA	-21	True	NA	NA	NA	75205719	75235710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
transcript_42457.known	chr17	-	3871	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_14	25.3475066574604	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252951	True	NA	-5	True	AATAAA	-16	NA	75261606	75236598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_42459.known	chr17	-	1358	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	69.8593825719447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCTTCCTTTATAT	-75269973	True	NA	NA	False	AATAAA	-14	NA	75271173	75266232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
transcript_4246.nic	chr1	-	1791	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	56.0094744171894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545564	True	NA	1	True	AATAAA	-19	NA	58546793	58480718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
transcript_42460.known	chr17	-	1419	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	62.651593932016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCTGATACTAAAAC	-75270027	True	NA	NA	False	NA	NA	NA	75271227	75266246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_42461.nic	chr17	+	1203	6	NIC	ENSG00000125445.11	novel	731	5	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	141	junction_5	598.471720300968	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGGTGTGACTTGTGC	NA	False	NA	36	True	TATAAA	-6	NA	75261640	75266363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701_75265967_75266192
transcript_42462.known	chr17	-	1319	6	FSM	ENSG00000125457.15	ENST00000325102.13	1319	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	33.434114314574	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	-75270031	True	NA	NA	False	AATAAA	-19	NA	75271231	75266227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75271143
transcript_42470.known	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_3	38.1141377968858	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	75249002	True	NA	49	True	TATAAA	-19	NA	75261878	75266376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
transcript_42479.known	chr17	-	952	5	FSM	ENSG00000125457.15	ENST00000580571.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	65.3313668921752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAGCCACTGGTGGG	-75270027	True	NA	NA	False	NA	NA	NA	75271227	75266434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75268082_75268193_75270113_75270246_75271143
transcript_4248.known	chr1	-	7751	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_7	38.7825816915182	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	-58689703	True	NA	-21	True	AATAAA	-15	NA	58700062	58654742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_42480.known	chr17	+	1717	4	FSM	ENSG00000125445.11	ENST00000579761.5	1717	4	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_3	42.1979462375442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTCTTGTGTTCTCC	75259542	True	NA	NA	False	NA	NA	NA	75261673	75264490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339
transcript_42483.known	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_2	17.9876500843094	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	75249035	True	NA	3	True	NA	NA	NA	75261911	75266330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
transcript_42485.known	chr17	-	1554	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	43.4638014998266	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAACCTATTTAATAGAC	-75286951	True	NA	-54	True	NA	NA	NA	75289411	75273029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_42487.known	chr17	-	1630	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	64.3948280341754	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-75286973	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_42489.known	chr17	-	1496	7	FSM	ENSG00000125454.12	ENST00000442286.6	1496	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	46.8780924905819	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTATCTTACTCCATC	-75286930	True	NA	-17	True	ATTAAA	-12	NA	75289390	75272992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_42491.nic	chr17	-	1370	6	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	64.2669432912442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-75286973	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
transcript_42493.known	chr17	-	693	6	FSM	ENSG00000125454.12	ENST00000583332.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	65.4809896076716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGAAGGCTGCCCTCT	-75286926	True	NA	NA	False	NA	NA	NA	75289386	75273550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_42498.known	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_5	74.4859718336278	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75388986	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
transcript_4250.nic	chr1	-	1595	9	ISM	ENSG00000162601.11	ENST00000659812.1	3533	20	-104	17804	-26	0	5prime_fragment	FALSE	canonical	3	146	junction_4	37.068981305129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGTTAAACTGTGTTT	-58689744	True	NA	NA	False	AATAAA	-19	NA	58700103	58676771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_42500.known	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	45.985731482711	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75391775	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
transcript_42508.known	chr17	-	3669	20	FSM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	28.7951981223093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664667	True	NA	-18	True	AATAAA	-36	NA	75667154	75626853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_4251.known	chr1	-	378	5	FSM	ENSG00000162601.11	ENST00000483003.5	378	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	24.2538656712698	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAAAATTATGGAAT	-58689713	True	NA	NA	False	TATAAA	-11	NA	58700072	58690187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_42511.known	chr17	-	1749	9	FSM	ENSG00000108469.15	ENST00000340830.9	1749	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.3506454774911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTGTGTGTTTTTAT	-75664702	True	NA	6	True	AAAAAG	-21	NA	75667189	75650358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75650719_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_42518.known	chr17	+	1000	12	FSM	ENSG00000161526.15	ENST00000583536.5	1000	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_3	262.816845378823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCGTGCAGCCCAGT	75655969	True	NA	NA	False	NA	NA	NA	75667425	75706545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_42524.known	chr17	+	2500	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_9	35.5084496986281	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	75655881	True	NA	23	True	TATAAA	-18	NA	75667337	75708059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_42526.known	chr17	+	1272	11	FSM	ENSG00000161526.15	ENST00000293208.13	1272	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	322.945753958772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCCCCAAGACTCAATAG	75655909	True	NA	82	True	NA	NA	NA	75667365	75706824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75705610_75705694_75706007_75706093_75706339
transcript_42528.known	chr17	+	2439	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	188.661039047072	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	75655889	True	NA	18	True	TATAAA	-13	NA	75667345	75708054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_4253.known	chr1	-	698	3	FSM	ENSG00000162601.11	ENST00000489282.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	21.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTTTCCCTACATT	-58689718	True	NA	NA	False	AATAAA	-26	NA	58700077	58692405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58692932_58695128_58695208_58699984
transcript_42533.known	chr17	+	5896	40	FSM	ENSG00000132470.14	ENST00000200181.8	5896	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_32	6.66923027632368	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGCCTTGCCCATTCT	75721042	True	NA	11	True	AATAAA	-18	NA	75721458	75757818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75721613_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75753764_75753975_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_42534.known	chr17	-	1397	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_2	33.2430750806288	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-75762885	True	NA	30	True	NA	NA	NA	75765192	75757893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_42538.known	chr17	+	1312	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	75782199	True	NA	14	True	ATTAAA	-27	NA	75784854	75794198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
transcript_42543.known	chr17	-	576	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7625.40547555779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	-75701979	True	NA	-33	True	NA	NA	NA	75779780	75778573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
transcript_42544.known	chr17	-	2705	4	FSM	ENSG00000132475.10	ENST00000254810.8	2705	4	0	0	0	0	multi-exon	TRUE	canonical	3	13885	junction_3	1092.53110812563	4925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTCATTTCTCAATG	-75701978	True	NA	-16	True	AATAAA	-15	NA	75779779	75776433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779656
transcript_42546.known	chr17	-	783	4	FSM	ENSG00000132475.10	ENST00000591890.5	783	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7083.37692535606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTAGCTATTAAGGTAC	-75701958	True	NA	-102	True	NA	NA	NA	75779759	75778324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778820_75778964_75779046_75779185_75779656
transcript_4255.known	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	-59078063	False	NA	NA	False	NA	NA	NA	59078116	59055998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_59056186_59059637_59059683_59078031
transcript_42550.known	chr17	+	984	3	FSM	ENSG00000132478.10	ENST00000587501.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	66.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGAAGTAAGAGTACTT	75782193	True	NA	8	True	ATTAAA	-22	NA	75784848	75794124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75784985_75792312_75792479_75793442
transcript_42552.known	chr17	-	586	3	FSM	ENSG00000132475.10	ENST00000587171.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_2	1034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCCAGTTGGCTCGCC	-75701977	True	NA	-97	True	NA	NA	NA	75779778	75778637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778964_75779046_75779185_75779656
transcript_42555.known	chr17	-	575	3	FSM	ENSG00000132475.10	ENST00000589417.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_2	1252.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCCAAAGACATCCAGT	-75701978	True	NA	-106	True	NA	NA	NA	75779779	75778646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778809_75779185_75779656
transcript_42556.nic	chr17	-	1784	9	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-61	0	intron_retention	FALSE	canonical	3	15	junction_8	19.4482486358027	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	NA	False	NA	-1	True	AATAAA	-25	NA	75833330	75827224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_42559.nnic	chr17	+	1300	3	Antisense	novelGene_ENSG00000092929.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTTCTCTGTTTTAAAT	NA	False	NA	7	True	AATACA	-19	NA	75830585	75833433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_75830747_75831248_75831316_75832361
transcript_4256.nic	chr1	+	1943	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	13.2939418115504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295947	True	NA	8	True	AATAAA	-19	NA	59296774	59762724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_42563.known	chr17	-	1745	8	FSM	ENSG00000132471.12	ENST00000590221.5	1745	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.944790425574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAATAAACCCTGTTT	-75846645	True	NA	-40	True	AATATA	-4	NA	75855306	75845771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75846788_75846907_75846985_75847486_75847598_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_42565.known	chr17	-	1859	8	FSM	ENSG00000132471.12	ENST00000254806.8	1859	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	46.2473385886216	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTCTGGCTCTGCGTGT	-75846674	True	NA	-6	True	AGTAAA	-16	NA	75855335	75845698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_42569.known	chr17	-	928	7	FSM	ENSG00000132471.12	ENST00000433525.6	928	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	176.457501965771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTTCTGGGAGCACG	-75846674	True	NA	NA	False	NA	NA	NA	75855335	75846494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_4257.known	chr1	+	1873	16	FSM	ENSG00000172456.18	ENST00000303721.12	1873	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.054977768533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	59297075	True	NA	14	True	AATAAA	-25	NA	59297093	59762730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_42572.known	chr17	-	1907	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	7.49933330370107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878174	False	NA	NA	False	AATAAA	-16	NA	75878196	75874163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
transcript_42573.known	chr17	-	2269	6	FSM	ENSG00000132481.7	ENST00000254816.6	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.16227766016838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878420	True	NA	NA	False	AATAAA	-16	NA	75878581	75874163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877873
transcript_42579.known	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_1	59.9979166304964	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	-75893526	True	NA	-3	True	AATAAA	-18	NA	75904884	75898643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
transcript_42589.known	chr17	-	2215	14	FSM	ENSG00000161533.12	ENST00000301608.8	2215	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	22.1736023021352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAAGTGCAATTAACA	-75976068	True	NA	NA	False	ATTAAA	-15	NA	75979134	75946576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
transcript_4259.nic	chr1	+	1722	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	15.0219227552702	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295953	True	NA	8	True	AATAAA	-19	NA	59296780	59762724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_42590.known	chr17	-	7317	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	26.8398714271297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTAATCTTTTTGTG	-75976100	True	NA	0	True	AATAAA	-39	NA	75979166	75941506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
transcript_42599.known	chr17	-	308	2	FSM	ENSG00000161533.12	ENST00000592329.1	308	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATCACCGTGCTTGGT	-75979020	False	NA	NA	False	NA	NA	NA	75979045	75978466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75978694_75978964
transcript_42602.nnic	chr17	+	2407	11	NNC	ENSG00000261408.7	novel	2259	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	80.5099372748483	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	75976633	True	NA	18	True	AATAAA	-21	NA	75979216	76005998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000490_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_42605.known	chr17	+	974	4	FSM	ENSG00000257949.7	ENST00000397640.6	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	3.29983164553722	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCGTGGTGCAGCGC	75976656	True	NA	11	True	AATAAA	-24	NA	75979239	76000586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140
transcript_42606.known	chr17	+	1582	7	FSM	ENSG00000250506.9	ENST00000425876.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	14.6173412995205	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	76001318	False	NA	19	True	AATAAA	-22	NA	76001337	76005999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_42607.known	chr17	-	2124	20	FSM	ENSG00000182473.22	ENST00000634349.1	2124	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	214.956866123483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	-76091272	True	NA	-97	True	NA	NA	NA	76103692	76083647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_42608.known	chr17	-	4782	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	184.396981845095	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGGGAGAAGTGGTC	-76091367	True	NA	-35	True	AATAAA	-20	NA	76103787	76081015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_42610.known	chr17	-	4596	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_12	61.2463966880211	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGGGAGAAGTGGT	-76091275	True	NA	-36	True	AATAAA	-19	NA	76103695	76081016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_42611.known	chr17	-	2831	16	FSM	ENSG00000167881.15	ENST00000307877.7	2831	16	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_9	85.4119429588158	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACACTTAACGATTCCC	-76060789	True	NA	-6	True	AATAAA	-18	NA	76072517	76038784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
transcript_42613.known	chr17	-	718	4	FSM	ENSG00000182473.22	ENST00000406660.4	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	20.7257220756131	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTTGTTGTTGTTG	-76091314	True	NA	NA	False	ATTAAA	-37	NA	76103734	76101011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76101377_76101678_76101864_76103360_76103427_76103632
transcript_42614.known	chr17	-	2958	6	FSM	ENSG00000182473.22	ENST00000405068.3	2958	6	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	63.2626271980543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-76091323	True	NA	NA	False	NA	NA	NA	76103743	76092314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_42615.known	chr17	-	2587	3	FSM	ENSG00000129654.8	ENST00000322957.7	2587	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACCTGCTCAAAACTT	-76141034	True	NA	-4	True	AATAAA	-18	NA	76141245	76136332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76138121_76139897_76140565_76141113
transcript_42616.known	chr17	+	660	2	FSM	ENSG00000185262.9	ENST00000589240.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGAGGGCAGGGGGTTT	76265681	False	NA	-88	True	NA	NA	NA	76265702	76270586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76265970_76270193
transcript_42619.known	chr17	-	3435	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	51.0412566121095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTCTCAATTGTTAAC	-76348839	True	NA	NA	False	NA	NA	NA	76353916	76309477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_4262.nic	chr1	+	1594	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	15.3098181747655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295969	True	NA	8	True	AATAAA	-19	NA	59296796	59762724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_42621.known	chr17	-	1678	10	FSM	ENSG00000161542.17	ENST00000324684.8	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	167.062714623233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAGTCTTTTCATTAG	NA	False	NA	-43	True	AATAAA	-13	NA	76354198	76310933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76354116
transcript_42628.known	chr17	-	3511	19	FSM	ENSG00000129667.13	ENST00000675367.1	3511	19	0	0	0	0	multi-exon	TRUE	canonical	2	33	junction_12	16.7416830282168	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-76499417	True	NA	-13	True	ATTAAA	-18	NA	76501423	76470895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76501352
transcript_42629.known	chr17	+	3059	6	FSM	ENSG00000163597.16	ENST00000667091.1	3059	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	696.253574497108	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	76516828	True	NA	19	True	AATAAA	-9	NA	76557765	76565338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76557969_76558280_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_42632.known	chr17	+	989	5	FSM	ENSG00000163597.16	ENST00000586942.7	993	5	3	1	0	-1	multi-exon	FALSE	canonical	3	62	junction_1	710.090487191597	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTGTCTCCGCAGA	76516831	True	NA	9	True	GATAAA	-4	NA	76557768	76563581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_42634.known	chr17	+	1830	4	FSM	ENSG00000163597.16	ENST00000653677.2	2536	4	0	706	0	-637	multi-exon	FALSE	canonical	3	56	junction_3	290.425358549988	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAACTGTAAGTCCAAT	76516828	True	NA	-18	True	NA	NA	NA	76557765	76564642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76558944_76559044_76561287_76561403_76563118
transcript_4264.nnic	chr1	+	1455	13	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	17.1553360665291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295956	True	NA	8	True	AATAAA	-19	NA	59296783	59762724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_42643.known	chr17	+	2620	4	FSM	ENSG00000163597.16	ENST00000587838.2	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	828.516076421507	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	76516858	True	NA	19	True	AATAAA	-9	NA	76557795	76565338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76558373_76558601_76561287_76561399_76563118
transcript_42644.known	chr17	+	2407	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	3	27	0	-17	multi-exon	FALSE	canonical	3	56	junction_2	569	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	76516831	True	NA	2	True	NA	NA	NA	76557768	76565321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76561287_76561403_76563118
transcript_42650.known	chr17	+	84	1	FSM	ENSG00000199961.1	ENST00000363091.1	84	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCAAGTTTGCCTTACA	76561098	False	NA	NA	False	AAGAAA	-38	NA	76561108	76561192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76561100_76561200
transcript_42651.known	chr17	-	1833	4	FSM	ENSG00000182534.14	ENST00000449428.7	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	38.3869190682914	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTTTTCAGTTTG	-76706997	True	NA	-1	True	AATAAA	-24	NA	76710965	76679565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76680880_76685071_76685166_76688112_76688177_76710604
transcript_42652.known	chr17	+	1717	1	FSM	ENSG00000261335.1	ENST00000565271.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTAGTATAATTAC	76671823	True	NA	4	True	AATAAA	-16	NA	76671941	76673658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76671900_76673700
transcript_42653.known	chr17	-	1898	7	FSM	ENSG00000070495.15	ENST00000542934.5	1898	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	75.0570153653578	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-76726770	False	NA	-24	True	AATAAA	-24	NA	76726784	76718445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76718861_76720359_76720499_76721262_76721357_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_42655.known	chr17	-	1621	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	11.0526015037185	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAAATGTTTTCCTTT	-76724383	True	NA	-29	True	AATAAA	-19	NA	76726606	76718450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_42661.known	chr17	+	2538	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	17.1974265310232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	76737108	False	NA	NA	False	AAAAAG	-12	NA	76737700	76779286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_42665.known	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	12.5320889893852	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	76737851	True	NA	16	True	TATAAA	-16	NA	76738070	76778727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_42669.known	chr17	+	1059	6	FSM	ENSG00000181038.14	ENST00000586738.5	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81.6519442511934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTATTACAAGTACTTGGA	76724407	True	NA	NA	False	ATTAAA	-3	NA	76726842	76733866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76726880_76726969_76727214_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_42671.known	chr17	+	581	5	FSM	ENSG00000181038.14	ENST00000588563.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.746794813258	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATGCTGGTCATTT	76724414	True	NA	NA	False	NA	NA	NA	76726849	76733643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_42673.known	chr17	+	846	5	FSM	ENSG00000181038.14	ENST00000592849.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	86.1521183720981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCACATTCCTCTT	76724404	True	NA	NA	False	NA	NA	NA	76726839	76733564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_42675.known	chr17	+	1184	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	80.7480649922956	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	76724407	True	NA	NA	False	ATTAAA	-32	NA	76726842	76733936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_42676.known	chr17	+	617	4	FSM	ENSG00000181038.14	ENST00000589977.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	86.1484506857526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCTGACTGGTCACTT	76724394	True	NA	NA	False	TTTAAA	-19	NA	76726829	76733516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292
transcript_42677.nic	chr17	+	750	4	NIC	ENSG00000181038.14	novel	1128	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	101.512998620319	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724377	True	NA	NA	False	ATTAAA	-17	NA	76726812	76733880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_76726880_76732977_76733216_76733292_76733378_76733520
transcript_42678.known	chr17	+	904	4	FSM	ENSG00000181038.14	ENST00000586752.5	904	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	95.5207947110064	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAACTATGAGCAGAC	76724415	True	NA	NA	False	NA	NA	NA	76726850	76733738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76727214_76732977_76733216_76733292_76733378_76733520
transcript_42680.nnic	chr17	+	1375	4	NNC	ENSG00000181038.14	novel	1128	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	104.651803615609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724403	True	NA	NA	False	ATTAAA	-17	NA	76726838	76733880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_76727531_76732977_76733216_76733292_76733378_76733520
transcript_42681.known	chr17	+	1006	4	FSM	ENSG00000181038.14	ENST00000590964.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	95.2272136640689	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	76724418	True	NA	NA	False	ATTAAA	-15	NA	76726853	76733878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76727179_76732977_76733216_76733292_76733378_76733520
transcript_42684.nnic	chr17	+	493	3	NIC	ENSG00000181038.14	novel	1128	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724396	True	NA	NA	False	ATTAAA	-17	NA	76726831	76733880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_76726880_76733292_76733378_76733520
transcript_42687.known	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_1	96.5	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-76654137	True	NA	-4	True	ATTAAA	-31	NA	76737331	76734114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76735159_76736153_76736465_76736798
transcript_42690.known	chr17	-	3246	1	FSM	ENSG00000280122.1	ENST00000625040.1	3246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGAATTGCAGTGTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	76969530	76966284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76966300_76969500
transcript_42691.known	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_17	44.4644409072048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135995	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
transcript_42692.known	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	15.8922150753128	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135932	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_42694.nic	chr17	+	806	6	ISM	ENSG00000129657.16	ENST00000436233.9	5500	17	-58	23552	-21	0	5prime_fragment	FALSE	canonical	3	162	junction_4	12.0764233115604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTATCTTGGGATTT	77135874	True	NA	NA	False	ATTAAA	-4	NA	77140910	77193549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420
transcript_42697.nnic	chr17	+	1451	3	NNC	ENSG00000129657.16	novel	5500	17	NA	NA	2393	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77215094	True	NA	NA	False	AATAAA	-21	NA	77215107	77217101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_77215715_77216153_77216271_77216374
transcript_42698.known	chr17	+	2185	3	FSM	ENSG00000234912.12	ENST00000434411.6	2185	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTCGTTCTCCTGTGTG	NA	False	NA	10	True	AATAAA	-20	NA	77088630	77094990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152_77089272_77093243
transcript_42699.nnic	chr17	+	1010	3	NNC	ENSG00000234912.12	novel	849	2	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGACTCGTTCTCCTG	77087000	True	NA	6	True	AATAAA	-16	NA	77088754	77094986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_77088950_77089152_77089725_77094743
transcript_427.known	chr1	+	2228	1	FSM	ENSG00000224870.8	ENST00000572242.1	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAAATTACTCTGTC	1397897	False	NA	14	True	TATAAA	-7	NA	1399805	1402033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399800_1402000
transcript_4270.nic	chr1	+	1425	11	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	21.1992924410226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTGTATGTCTGGAAG	59295947	True	NA	NA	False	ATTAAA	-20	NA	59296774	59660423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59660218
transcript_42700.known	chr17	+	849	2	FSM	ENSG00000234912.12	ENST00000366365.3	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGAAACCCCATTTC	77087023	True	NA	NA	False	NA	NA	NA	77088777	77089829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152
transcript_42701.known	chr17	+	3733	12	FSM	ENSG00000184640.20	ENST00000427177.6	3733	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	198.768397973767	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77277177	True	NA	26	True	AATAAA	-22	NA	77281498	77500593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77281555_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_42703.known	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	148.033029347432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	77451219	False	NA	NA	False	NA	NA	NA	77451243	77499024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_42704.nic	chr17	+	3143	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	156.673837503345	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77460930	True	NA	26	True	AATAAA	-22	NA	77466392	77500593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_42706.known	chr17	-	8387	20	FSM	ENSG00000141524.17	ENST00000590602.6	8387	20	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_19	49.9735109888631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-78124593	True	NA	2	True	AATAAA	-22	NA	78128755	78107396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_42707.nic	chr17	-	2849	20	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_19	59.1355080323938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCCTTGGGGCTCTG	-78124624	True	NA	-14	True	ATTAAA	-17	NA	78128786	78112918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128658
transcript_42709.known	chr17	-	1681	12	FSM	ENSG00000141524.17	ENST00000306591.11	1681	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	92.7640746933801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGCTTGTCCCTTGGG	-78124468	True	NA	-20	True	ATTAAA	-11	NA	78128630	78112924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78113212_78113547_78113622_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_42711.known	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	63.6465936943124	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	78159575	True	NA	15	True	AATAAA	-15	NA	78168580	78172720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
transcript_42714.known	chr17	+	1553	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	77.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	78159605	True	NA	14	True	AATAAA	-14	NA	78168610	78172719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78168716_78170816_78171055_78171509
transcript_42715.known	chr17	+	2125	3	FSM	ENSG00000108639.8	ENST00000589168.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	468	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	78159612	True	NA	NA	False	NA	NA	NA	78168617	78173527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78168716_78170816_78171055_78171738
transcript_42716.known	chr17	-	631	8	FSM	ENSG00000167900.12	ENST00000586613.1	631	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	485.760586028525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCACTCCGTGTGTCGG	-78179064	True	NA	NA	False	NA	NA	NA	78187063	78174925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78183753_78183778_78185054_78185166_78186786_78186819_78186928
transcript_4272.known	chr1	+	5713	22	FSM	ENSG00000134709.13	ENST00000371208.5	5713	22	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_17	26.0372139050342	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAGTTGTGAAATGAT	59811432	True	NA	10	True	AATAAA	-18	NA	59814948	59876322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314_59848517_59849072_59849184_59858427_59858516_59858984_59859046_59860187_59860329_59862783_59862878_59864631_59864667_59865162_59865246_59865871_59865973_59868249_59868352_59871041_59871111_59872794
transcript_42720.known	chr17	-	642	7	FSM	ENSG00000167900.12	ENST00000590862.5	642	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	414.593274587678	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGCTGCCCAGCCACT	-78179037	True	NA	NA	False	NA	NA	NA	78187036	78174701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78174789_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_42722.known	chr17	-	1431	7	FSM	ENSG00000167900.12	ENST00000301634.12	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_1	77.2990225610188	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTGGACGCACATT	-78179053	True	NA	NA	False	NA	NA	NA	78187052	78174090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_42727.known	chr17	-	1681	6	FSM	ENSG00000167900.12	ENST00000588734.5	1681	6	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	57.877802307966	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTATGAAATTAACTAAT	NA	False	NA	NA	False	GGGGCT	-45	NA	78187233	78174120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_42729.known	chr17	-	683	5	FSM	ENSG00000167900.12	ENST00000590430.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	478.483542036714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGAAGCCGTGGCTGCC	-78179039	True	NA	NA	False	NA	NA	NA	78187038	78174829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78175170_78175528_78175619_78185054_78185166_78186786_78186819_78186928
transcript_42731.known	chr17	+	1730	11	FSM	ENSG00000183077.16	ENST00000409257.10	1686	11	-45	1	-41	0	multi-exon	FALSE	canonical	0	0	junction_7	20.3492014585339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	NA	False	NA	9	True	AATAAA	-17	NA	78187316	78207701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204655_78204742_78204827_78204901_78205092_78205191_78205439_78205519_78205602_78205739_78205945_78206051_78206910
transcript_42733.nic	chr17	+	1249	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	16.3095064303001	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179591	True	NA	9	True	AATAAA	-17	NA	78187325	78207701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
transcript_42735.known	chr17	+	647	5	FSM	ENSG00000183077.16	ENST00000588800.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.4560759719097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGACGCTCAAAAGTA	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78202702_78202752_78205945_78206051_78206910
transcript_42738.known	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	78179666	True	NA	3	True	AATAAA	-17	NA	78187400	78197560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78197134
transcript_42739.known	chr17	+	578	3	FSM	ENSG00000183077.16	ENST00000589256.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	78179627	True	NA	3	True	AATAAA	-17	NA	78187361	78197560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78197145
transcript_4274.known	chr1	-	1879	9	FSM	ENSG00000134716.11	ENST00000371204.4	1879	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	2.521780125229	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTCCTTCCTGCTTC	-59926667	True	NA	NA	False	CATAAA	-26	NA	59926773	59893307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_59893830_59900964_59901104_59904870_59905059_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_42740.known	chr17	+	582	3	FSM	ENSG00000183077.16	ENST00000591952.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGCAGTGGCGTGAT	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78206910
transcript_42741.known	chr17	+	2711	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	730.601250683299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	NA	False	NA	12	True	AATAAA	-22	NA	78214185	78225636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
transcript_42743.known	chr17	+	2574	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_3	185.581967514806	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	78200877	True	NA	11	True	AATAAA	-21	NA	78214252	78225635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
transcript_42746.known	chr17	+	2446	3	FSM	ENSG00000089685.15	ENST00000374948.6	2446	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	802.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	78200888	True	NA	12	True	AATAAA	-22	NA	78214263	78225636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78223464
transcript_42749.nnic	chr17	+	901	4	NNC	ENSG00000266970.2	novel	874	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	3.68178700572909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359785	True	NA	-14	True	CATAAA	-7	NA	78360416	78364905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_78360774_78361765_78361822_78362672_78362752_78364496
transcript_4275.known	chr1	-	2028	12	FSM	ENSG00000162598.13	ENST00000371201.3	2028	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.11340442853781	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGATTTTTTCCTAC	-60073751	True	NA	NA	False	AATAAA	-18	NA	60073770	59990393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_59990834_59997608_59997817_60001076_60001157_60010391_60010457_60025400_60025499_60033475_60033642_60037991_60038108_60039916_60040181_60040990_60041132_60055203_60055439_60072536_60072671_60073689
transcript_42752.nnic	chr17	+	1164	4	NNC	ENSG00000266970.2	novel	1119	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.1107279647928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359809	True	NA	-14	True	CATAAA	-7	NA	78360440	78364905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_78361061_78361765_78361822_78362672_78362752_78364496
transcript_42753.nnic	chr17	+	905	4	NNC	ENSG00000266970.2	novel	490	2	NA	NA	783	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	13.29995822884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78361217	False	NA	-14	True	CATAAA	-7	NA	78361243	78364905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_78361605_78361765_78361822_78362672_78362752_78364496
transcript_42755.nnic	chr17	+	1043	3	FSM	ENSG00000266970.2	ENST00000689065.1	1047	3	2	2	2	-2	multi-exon	FALSE	canonical	2	4	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGGGAAGTACACAGTG	78359790	True	NA	4	True	AATAAA	-16	NA	78360421	78364923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78360774_78362672_78362937_78364496
transcript_42759.known	chr17	+	2297	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	61.9039478985961	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78372180	True	NA	14	True	AATAAA	-18	NA	78378648	78424659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_4276.known	chr1	-	1321	4	FSM	ENSG00000226476.7	ENST00000668078.1	1321	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTAGTTTATGGTAATT	-60640379	True	NA	NA	False	AATAAA	-15	NA	60640489	60595510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_60596374_60600126_60600251_60640010_60640127_60640271
transcript_42770.nic	chr17	+	2126	9	NIC	ENSG00000087157.19	novel	2033	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	55.132652530057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	78372168	True	NA	3	True	AATATA	-18	NA	78378636	78424554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_42771.nic	chr17	+	2231	9	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	55.132652530057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78372168	True	NA	14	True	AATAAA	-18	NA	78378636	78424659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_42772.known	chr17	+	2033	9	FSM	ENSG00000087157.19	ENST00000589426.5	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	77.3618728767602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	78372188	True	NA	3	True	AATATA	-18	NA	78378656	78424554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_42779.nic	chr17	+	1149	3	NIC	ENSG00000267432.6	novel	2710	4	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAACAGGCCAACA	78484567	True	NA	NA	False	AATGAA	-6	NA	78484837	78490625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_78485163_78489374_78489575_78490001
transcript_42780.known	chr17	-	3286	13	FSM	ENSG00000108669.17	ENST00000591455.5	3286	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	11.2998893799895	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	-78780735	True	NA	-1	True	AATAAA	-21	NA	78782272	78674047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_42782.known	chr17	-	3187	17	ISM	ENSG00000055483.20	ENST00000312010.10	5234	20	23	5578	8	924	5prime_fragment	FALSE	canonical	3	136	junction_8	17.4918507811495	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGACACAGCGGGCAG	-78833909	True	NA	NA	False	AAAAAG	-18	NA	78840864	78802460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_42783.known	chr17	-	2479	3	ISM	ENSG00000055483.20	ENST00000592231.6	5895	21	41830	1	6	0	3prime_fragment	FALSE	canonical	3	53	junction_1	69.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGTCTTTGTTGGT	-78798974	False	NA	-13	True	AATAAA	-17	NA	78798984	78795652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_78797903_78798399_78798552_78798907
transcript_42784.known	chr17	-	2202	6	FSM	ENSG00000108679.13	ENST00000262776.8	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_2	23.6693895147298	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTGTACAGAAAGT	-78976573	True	NA	-15	True	ATTAAA	-19	NA	78979923	78971254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_42785.known	chr17	-	3287	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	31.1638813372147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-79007206	True	NA	-10	True	AATAAA	-18	NA	79009764	78991715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_42787.known	chr17	-	3534	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	-79007259	True	NA	-11	True	AATAAA	-17	NA	79009817	78991716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
transcript_42791.nic	chr17	-	1961	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	978	-1471	196	0	3prime_fragment	FALSE	canonical	3	85	junction_1	15.2212844398888	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGTATGCTCTGGCA	-79096912	True	NA	-1	True	AATAAA	-23	NA	79097530	79089344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_42792.nic	chr17	-	506	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	978	-16	196	0	3prime_fragment	FALSE	canonical	3	85	junction_1	15.2212844398888	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	-79096912	True	NA	25	True	AAAACA	-41	NA	79097530	79090799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_42796.nnic	chr17	+	1267	3	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183387	False	NA	9	True	AAAAAG	-3	NA	79183413	79186282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_79183693_79184346_79184578_79185525
transcript_42799.nnic	chr17	+	1028	2	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183387	True	NA	9	True	AAAAAG	-3	NA	79183421	79186282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_79183693_79185525
transcript_428.known	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	57.2033410057684	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-1392303	True	NA	-22	True	AATGAA	-17	NA	1407293	1401908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
transcript_42802.nnic	chr17	+	426	5	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	15	405	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	250.72145899384	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	79765200	True	NA	20	True	AATAAA	-16	NA	79778177	79788388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79788308
transcript_42803.known	chr17	+	567	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	79765185	True	NA	3	True	GATAAA	-15	NA	79778162	79779739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_79778308_79778383_79778428_79779361
transcript_42804.known	chr17	-	3752	5	FSM	ENSG00000141570.11	ENST00000269385.9	3752	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.1650635094611	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTGGTTTTATTC	-79796961	True	NA	NA	False	AATATA	-16	NA	79797077	79792131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79795559_79796056_79796124_79796249_79796316_79796496_79796541_79796929
transcript_42805.known	chr17	-	4244	8	FSM	ENSG00000167291.16	ENST00000340848.11	4244	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	61.2265781956743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGCTAATGTCTGC	-79950565	True	NA	1	True	NA	NA	NA	79950836	79937907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_42806.known	chr17	-	1141	7	FSM	ENSG00000167291.16	ENST00000572862.5	1141	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.2531504513113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATTTGCCGCCCTCATT	-79950557	True	NA	NA	False	ATTAAA	-34	NA	79950828	79943855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79944108_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_42807.known	chr17	+	1970	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	7.15821206726931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	80035634	True	NA	20	True	TATAAA	-15	NA	80036651	80067901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
transcript_42808.nic	chr17	+	1993	9	ISM	ENSG00000141519.15	ENST00000269318.9	1970	11	-19	8398	1	-7267	5prime_fragment	FALSE	canonical	3	14	junction_7	4.9180788932265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATGAGTCACCATCT	80036409	False	NA	NA	False	NA	NA	NA	80036632	80059503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857
transcript_4281.nic	chr1	-	1015	7	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	105.651549917642	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721207	True	NA	-4	True	AATAAA	-18	NA	61725146	61681045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
transcript_42810.known	chr17	+	816	3	FSM	ENSG00000141519.15	ENST00000572083.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGGTGGCGCACGCCT	80035646	True	NA	NA	False	ACTAAA	-17	NA	80036663	80040535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80036692_80038122_80038187_80039811
transcript_42811.known	chr17	+	537	3	FSM	ENSG00000141519.15	ENST00000574099.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAGAGCCATCCCAC	80035643	True	NA	NA	False	NA	NA	NA	80036660	80040187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80036758_80038122_80038187_80039811
transcript_42812.known	chr17	+	952	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	80095918	True	NA	NA	False	AATAAA	-18	NA	80101596	80102733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80101626_80101810
transcript_42813.known	chr17	-	2524	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_7	98.1348372444349	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGTAATTACCTGT	-80132367	True	NA	NA	False	ATTAAA	-23	NA	80147128	80134368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
transcript_42817.known	chr17	+	2888	18	FSM	ENSG00000181045.15	ENST00000361193.8	2888	18	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	15.4899230554246	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAATGTCTGCGTGG	80218746	True	NA	45	True	AATAAA	-17	NA	80220426	80253500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80220497_80220915_80221116_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_4282.nic	chr1	-	995	7	NIC	ENSG00000162604.12	novel	969	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_6	109.321264577798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721205	True	NA	-4	True	AATAAA	-18	NA	61725144	61681045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724919
transcript_42820.known	chr17	-	2705	8	FSM	ENSG00000181523.13	ENST00000326317.11	2705	8	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_1	10.6157372589482	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGATACCAACCTG	-80219452	True	NA	-12	True	AGTAAA	-29	NA	80220333	80209275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_42821.nic	chr17	+	588	4	ISM	ENSG00000173821.20	ENST00000508628.6	17730	69	-35	116402	-21	-13097	5prime_fragment	FALSE	canonical	2	3	junction_3	8.83176086632785	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	80254483	True	NA	NA	False	NA	NA	NA	80260830	80278910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80278763
transcript_42823.nic	chr17	+	441	3	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-39	48059	-21	-18603	5prime_fragment	FALSE	canonical	3	18	junction_2	3	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	80254483	True	NA	7	True	AAGAAA	-45	NA	80260830	80273404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80260903_80263573_80263779_80273240
transcript_42824.nnic	chr17	+	339	3	NNC	ENSG00000173821.20	novel	5316	17	NA	NA	-8	-18603	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	80254496	True	NA	7	True	AAGAAA	-45	NA	80260843	80273404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_80260903_80263662_80263779_80273240
transcript_42826.nic	chr17	+	1174	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	25.9234390341641	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80414429	True	NA	34	True	AATAGA	-24	NA	80415161	80430343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_42827.known	chr17	+	2820	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.0903233667185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTTTTTTCTTCAG	80414434	True	NA	7	True	AATAAA	-22	NA	80415166	80438086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_4283.known	chr1	-	1248	7	FSM	ENSG00000162604.12	ENST00000371180.6	1248	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	111.157545852722	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTAGTGCTTTGTTA	NA	False	NA	-7	True	AATAAA	-15	NA	61725423	61681048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_42832.nic	chr17	+	1039	9	NIC	ENSG00000173818.17	novel	1226	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	15.169356446468	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80414429	True	NA	34	True	AATAGA	-24	NA	80415161	80430343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_42833.known	chr17	+	2680	9	FSM	ENSG00000173818.17	ENST00000520367.5	2680	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	22.0166840146285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTGATTTTTTTTC	80414434	True	NA	2	True	AATAAA	-17	NA	80415166	80438081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_42838.nic	chr17	+	1361	9	NIC	ENSG00000173818.17	novel	908	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	30.3126932983528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80415237	True	NA	34	True	AATAGA	-24	NA	80415451	80430343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415519_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_42839.nic	chr17	+	1017	9	NIC	ENSG00000173818.17	novel	908	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	22.3201142470194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80415237	True	NA	34	True	AATAGA	-24	NA	80415451	80430343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415519_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_42842.known	chr17	+	1226	8	FSM	ENSG00000173818.17	ENST00000323854.9	1226	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.9599067771905	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80414451	True	NA	34	True	AATAGA	-24	NA	80415183	80430343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_42843.nic	chr17	+	1226	8	NIC	ENSG00000173818.17	novel	1475	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_1	22.6265150580789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80415237	True	NA	34	True	AATAGA	-24	NA	80415451	80430343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415519_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_42845.known	chr17	+	2549	8	FSM	ENSG00000173818.17	ENST00000518901.5	2549	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.9489375373998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTGATTTTTTTTCT	80415272	True	NA	3	True	AATAAA	-18	NA	80415486	80438082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415611_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_42848.nic	chr17	+	824	4	NIC	ENSG00000173818.17	novel	864	4	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	26.1661358757205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGTATGTTAATTGT	80414429	True	NA	NA	False	TTTAAA	-9	NA	80415161	80418839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415251_80415649_80415822_80417780_80417946_80418441
transcript_4285.nnic	chr1	-	966	6	NIC	ENSG00000162604.12	novel	969	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	106.814605742848	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721218	True	NA	-4	True	AATAAA	-18	NA	61725157	61681045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724901
transcript_42850.nic	chr17	+	467	3	NIC	ENSG00000173818.17	novel	375	2	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	80414429	True	NA	26	True	AATAAA	-37	NA	80415161	80417145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415251_80415649_80415822_80416939
transcript_42852.known	chr17	+	864	4	FSM	ENSG00000173818.17	ENST00000523999.5	864	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5801861245835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTTTAATTATTG	80414445	True	NA	NA	False	AATACA	-16	NA	80415177	80420533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80419585_80419721_80420049
transcript_42853.known	chr17	-	995	1	FSM	ENSG00000260369.2	ENST00000562672.2	995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGTCTGTGGCCTGTAC	-80454585	True	NA	NA	False	NA	NA	NA	80454729	80453734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_80453700_80454700
transcript_42856.known	chr17	+	1664	8	FSM	ENSG00000176108.9	ENST00000325167.9	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	12.033965536373	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	80988348	True	NA	26	True	ATTAAA	-19	NA	80991840	81000133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_42858.known	chr17	+	2229	16	FSM	ENSG00000175866.16	ENST00000575245.5	2229	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.39049559027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGATCTGTCCGCC	81032594	False	NA	16	True	AATAAA	-16	NA	81035157	81116225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110956_81115769
transcript_4286.nnic	chr1	-	932	6	NIC	ENSG00000162604.12	novel	969	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	117.880278248738	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721202	True	NA	-4	True	AATAAA	-18	NA	61725141	61681045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724919
transcript_42861.known	chr17	+	2129	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	21.0776020012346	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	81032598	False	NA	15	True	AATAAA	-15	NA	81035161	81116224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
transcript_42862.known	chr17	+	1939	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_13	17.8049923189899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGGCAGGAC	NA	False	NA	NA	False	NA	NA	NA	81035121	81109238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_42863.known	chr17	+	3304	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	18.0111733894243	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	81032587	True	NA	NA	False	AATAAA	-26	NA	81035150	81117434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_42866.known	chr17	-	2455	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_12	16.454271650716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237154	True	NA	-5	True	AATAAA	-19	NA	81239055	81228276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_42867.known	chr17	-	2287	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	23.61187542651	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237190	True	NA	-5	True	AATAAA	-19	NA	81239091	81228276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_42868.known	chr17	+	565	3	FSM	ENSG00000224877.4	ENST00000431388.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	61	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTCTTGGCCTCTC	81223514	True	NA	62	True	GGGGCT	-20	NA	81239317	81241310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81239448_81239567_81239679_81240986
transcript_42870.known	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6189.05972933961	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
transcript_42871.known	chr17	-	1860	7	FSM	ENSG00000184009.13	ENST00000680227.1	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6684.80634640143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81262476	True	NA	26	True	AATAAA	-12	NA	81512776	81509976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
transcript_42872.known	chr17	-	1880	7	FSM	ENSG00000184009.13	ENST00000576544.6	1880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5205.25132278292	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGGTAGTCTTGGGG	-81512838	False	NA	90	True	NA	NA	NA	81512851	81509912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_42875.known	chr17	-	1993	7	FSM	ENSG00000184009.13	ENST00000576214.3	1993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6463.90387717309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512838	False	NA	26	True	AATAAA	-12	NA	81512851	81509976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_42881.known	chr17	-	2052	6	FSM	ENSG00000184009.13	ENST00000570382.2	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	5661.98733308368	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGAATGGCTCCTGTT	-81262518	True	NA	27	True	AATAAA	-13	NA	81512818	81509975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
transcript_42882.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000573283.7	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_5	1010.68471839639	6939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	-81262499	True	NA	32	True	AATAAA	-18	NA	81512799	81509970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_42884.known	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5511.97106668749	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_42890.known	chr17	-	2241	5	FSM	ENSG00000184009.13	ENST00000574671.6	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_4	1082.29694977857	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512838	False	NA	26	True	AATAAA	-12	NA	81512851	81509976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81512143_81512231_81512361_81512733
transcript_42891.known	chr17	-	1958	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_4	1081.79226286751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGCTGCCGTAACCA	-81262480	True	NA	11	True	NA	NA	NA	81512780	81509991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_42898.known	chr17	-	1749	7	FSM	ENSG00000184009.13	ENST00000681092.1	1749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6587.02154281854	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81262500	True	NA	26	True	AATAAA	-12	NA	81512800	81509976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512247_81512361_81512733
transcript_42899.known	chr17	+	1896	2	FSM	ENSG00000182612.10	ENST00000571914.1	1896	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGGTGGTTTGGAAT	NA	False	NA	NA	False	AATATA	-22	NA	81637170	81639177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81637407_81637517
transcript_429.known	chr1	+	1843	3	FSM	ENSG00000224870.8	ENST00000447725.2	1843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGATAAACAAAAGTATAA	1397663	True	NA	-13	True	NA	NA	NA	1399571	1402006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399690_1399980_1400304_1400604
transcript_42900.known	chr17	-	458	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGGGACTGCAACCT	-81653306	True	NA	NA	False	NA	NA	NA	81653694	81650962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
transcript_42901.known	chr17	-	821	2	FSM	ENSG00000204237.5	ENST00000575992.1	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCAGCCTCCTTCCTTC	-81662464	True	NA	-121	True	NA	NA	NA	81666537	81665155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665585_81666145
transcript_42902.known	chr17	-	553	2	FSM	ENSG00000204237.5	ENST00000571092.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTGGGCTCCCAAGCA	-81662505	True	NA	NA	False	NA	NA	NA	81666578	81665460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665585_81666149
transcript_42903.known	chr17	-	637	2	FSM	ENSG00000204237.5	ENST00000374741.4	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-81662532	True	NA	-1	True	AATAAA	-24	NA	81666605	81665035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665585_81666517
transcript_42904.known	chr17	-	678	2	FSM	ENSG00000204237.5	ENST00000573786.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGGTTTCACAGGA	-81662073	False	NA	-21	True	AATAAA	-4	NA	81666146	81665055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665585_81665997
transcript_42905.known	chr17	-	1600	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-81662562	True	NA	-1	True	AATAAA	-24	NA	81666635	81665035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665000_81666600
transcript_42906.known	chr17	+	890	7	FSM	ENSG00000185298.13	ENST00000574107.1	890	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	157.011323017022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGCCGCAGCTGTGAT	81661454	True	NA	NA	False	NA	NA	NA	81666754	81672685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81666901_81667728_81667863_81670001_81670029_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_42907.known	chr17	+	2095	6	FSM	ENSG00000185298.13	ENST00000329214.13	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	16.4438438328756	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	81661436	True	NA	17	True	ATTAAA	-20	NA	81666736	81673899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_42909.known	chr17	+	2978	23	FSM	ENSG00000185359.14	ENST00000678105.1	2978	23	0	0	0	0	multi-exon	TRUE	canonical	2	33	junction_1	204.076229478145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674279	True	NA	12	True	AATAAA	-13	NA	81683999	81702116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81684104_81684812_81684892_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_42910.known	chr17	+	2893	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_17	78.996455042597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	81674290	True	NA	17	True	AATAAA	-18	NA	81684010	81702121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_42928.known	chr17	-	763	5	FSM	ENSG00000214087.9	ENST00000573715.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	222.258155080978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACCCTACATGATGG	-81674426	True	NA	NA	False	NA	NA	NA	81683668	81681607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81682490_81682676_81683012_81683127_81683592
transcript_4293.known	chr1	-	1056	5	FSM	ENSG00000162604.12	ENST00000371178.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.395949711462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAAGGGC	-61721181	True	NA	NA	False	NA	NA	NA	61725120	61694153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_42930.known	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.941379338799	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674555	True	NA	-45	True	AATAAA	-15	NA	81683797	81681186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
transcript_42932.known	chr17	-	1526	5	FSM	ENSG00000214087.9	ENST00000571082.5	1526	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	242.759654802852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATATAAGAAATAAAA	-81674501	True	NA	-78	True	NA	NA	NA	81683743	81681219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682676_81683012_81683127_81683535_81683595_81683692
transcript_42933.known	chr17	-	694	4	FSM	ENSG00000214087.9	ENST00000576135.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	225.161176839071	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCACACCTGTAAT	-81674426	True	NA	NA	False	AAAAAG	-20	NA	81683668	81681491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683592
transcript_42935.nic	chr17	-	992	4	NIC	ENSG00000214087.9	novel	1087	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	234.990779960973	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674574	True	NA	-45	True	AATAAA	-15	NA	81683816	81681186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_81681880_81682033_81682150_81683535_81683595_81683692
transcript_42938.known	chr17	-	1856	4	FSM	ENSG00000214087.9	ENST00000570910.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	235.740441069316	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATATAAGAAATAA	-81674496	True	NA	-80	True	NA	NA	NA	81683738	81681221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81683127_81683535_81683595_81683692
transcript_42940.known	chr17	-	869	3	FSM	ENSG00000214087.9	ENST00000573392.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	262.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	-81674424	True	NA	-59	True	AATAAA	-1	NA	81683666	81681200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81683592
transcript_42941.known	chr17	-	1977	1	FSM	ENSG00000262049.1	ENST00000575312.1	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGGATGCGCGTATCTG	-81702862	True	NA	NA	False	AGTAAA	-23	NA	81703300	81701323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81701300_81703300
transcript_42943.known	chr17	+	1942	11	FSM	ENSG00000183048.12	ENST00000350690.10	1942	11	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_7	11.0435501538228	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	81709991	True	NA	16	True	AATAAA	-16	NA	81712283	81721012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_42944.known	chr17	+	1009	5	FSM	ENSG00000262814.8	ENST00000333676.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	33.5596483890997	872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGAGTGCCGTGCTC	81680667	True	NA	31	True	AATACA	-13	NA	81703366	81707517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81703576_81704243_81704431_81704632_81704717_81706905_81707041_81707123
transcript_42948.known	chr17	-	1038	7	FSM	ENSG00000225663.8	ENST00000572645.5	1038	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	423.572504615994	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81823970	True	NA	-12	True	AATAAA	-16	NA	81833268	81822416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_42952.known	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	210.814041278089	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81823993	True	NA	-12	True	AATAAA	-16	NA	81833291	81822416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_42956.known	chr17	-	618	6	FSM	ENSG00000225663.8	ENST00000575061.2	618	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	461.085415080547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCGTGACTGACGGCTG	-81823958	True	NA	NA	False	NA	NA	NA	81833256	81823125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_4296.known	chr1	-	427	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAGTCATTATTTTCT	-61742412	False	NA	0	True	AATAAA	-20	NA	61742424	61741997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_61742000_61742400
transcript_42965.known	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_4	141.046756432043	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-81823993	True	NA	44	True	NA	NA	NA	81833291	81822360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_42968.known	chr17	-	577	4	FSM	ENSG00000225663.8	ENST00000576431.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_3	152.504280449945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACGGCTGAGGCCTGCC	-81823944	True	NA	NA	False	NA	NA	NA	81833242	81823116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823514_81824286_81824406_81824498_81824555_81833237
transcript_42969.known	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	372.786206230268	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	-81824004	True	NA	-24	True	AATAAA	-4	NA	81833302	81822428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
transcript_42973.known	chr17	-	2253	11	FSM	ENSG00000185624.16	ENST00000570907.6	2253	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	709.850582869381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCAGCCCTGGGGC	-81827732	True	NA	NA	False	NA	NA	NA	81860515	81843430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845459_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_42974.known	chr17	-	2377	11	FSM	ENSG00000185624.16	ENST00000680914.1	2377	11	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_6	697.501541216935	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81827752	True	NA	-9	True	AATAAA	-13	NA	81860535	81843165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847013_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_42976.known	chr17	-	2437	11	FSM	ENSG00000185624.16	ENST00000331483.9	2437	11	0	0	0	0	multi-exon	FALSE	canonical	3	2166	junction_7	132.455879446705	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81827752	True	NA	-9	True	AATAAA	-13	NA	81860535	81843165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_42977.known	chr17	-	2288	10	FSM	ENSG00000185624.16	ENST00000576390.6	2288	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	731.653851233417	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACCTGTCCTTGCCTCG	-81827726	True	NA	-11	True	AATAAA	-11	NA	81860509	81843167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_42980.known	chr17	-	2394	11	FSM	ENSG00000185624.16	ENST00000680846.1	2394	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	701.163062347126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	-81827752	True	NA	-45	True	NA	NA	NA	81860535	81843201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855580_81859180_81859388_81860326
transcript_42981.known	chr17	-	2157	9	FSM	ENSG00000185624.16	ENST00000415593.6	2157	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	774.300722829961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTACCACCTGTCCTT	-81827750	True	NA	-17	True	AATAAA	-5	NA	81860533	81843173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81859178_81859388_81860326
transcript_42982.known	chr17	-	886	7	FSM	ENSG00000141522.12	ENST00000584461.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	309.399103999277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGGTGTGCTGCTG	-81852246	True	NA	NA	False	NA	NA	NA	81871329	81868259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_42983.nnic	chr17	-	1825	7	NNC	ENSG00000141522.12	novel	1837	6	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_1	368.017209742515	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	-81852320	True	NA	-18	True	AATAAA	-14	NA	81871403	81867720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81868970_81869047_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_42985.known	chr17	-	1568	6	FSM	ENSG00000141522.12	ENST00000400721.8	1568	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	376.888630765111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTCCCTGACCCAGC	-81852293	True	NA	NA	False	NA	NA	NA	81871376	81867896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81868944_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_42987.known	chr17	-	1837	6	FSM	ENSG00000141522.12	ENST00000269321.12	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_5	78.8938527389809	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	-81852254	True	NA	-18	True	AATAAA	-14	NA	81871337	81867720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_42990.known	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_7	18.5037533730022	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	-81907493	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_42991.known	chr17	-	1097	6	FSM	ENSG00000183684.8	ENST00000505490.3	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	1522	junction_5	135.99411751984	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGATTCGTCCCACTG	-81856197	True	NA	-5	True	AATAAA	-25	NA	81891586	81887834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81888146_81888240_81888419_81888519_81888584_81889181_81889330_81890688_81890821_81891322
transcript_42999.known	chr17	+	672	5	FSM	ENSG00000141552.18	ENST00000577747.5	672	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1769.53897597651	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871641	True	NA	30	True	ATTAAA	-14	NA	81891759	81900254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891830_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_43.known	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3581	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00113_+_0_800
transcript_430.known	chr1	-	1693	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	32.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTTAGAGTCATTT	-1392278	True	NA	-26	True	AATGAA	-13	NA	1407268	1401912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1402257_1405808_1407020_1407130
transcript_43000.known	chr17	+	599	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	1764.60151309014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	81871631	True	NA	-65	True	NA	NA	NA	81891749	81900159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_43006.known	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1730.40515486981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	31	True	ATTAAA	-15	NA	81891646	81900255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
transcript_43008.known	chr17	+	722	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_1	1375.02218163926	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871613	True	NA	28	True	AATAAA	-21	NA	81891731	81900356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
transcript_43010.known	chr17	+	638	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	1408.73875821207	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	81871604	True	NA	31	True	ATTAAA	-15	NA	81891722	81900255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
transcript_43011.known	chr17	+	964	4	FSM	ENSG00000141552.18	ENST00000612413.4	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	892.962982933161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGCCTCCAGACTGAAG	81871594	True	NA	NA	False	NA	NA	NA	81891712	81900533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893551_81893615_81894466_81894625_81899919
transcript_43017.known	chr17	+	636	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	1593.39769744475	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871627	True	NA	30	True	ATTAAA	-14	NA	81891745	81900254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
transcript_43019.known	chr17	+	881	4	FSM	ENSG00000141552.18	ENST00000357385.7	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	111.03452916398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871620	True	NA	30	True	ATTAAA	-14	NA	81891738	81900254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891864_81894466_81894587_81899241_81899543_81899919
transcript_43025.known	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	1688.07312901097	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871819	False	NA	30	True	ATTAAA	-14	NA	81891937	81900254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
transcript_43029.known	chr17	+	668	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	1685	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871604	True	NA	28	True	AATAAA	-21	NA	81891722	81900356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891834_81894466_81894587_81899919
transcript_43030.known	chr17	+	603	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	280.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	81871604	True	NA	29	True	ATTAAA	-13	NA	81891722	81900253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891834_81894466_81894625_81899919
transcript_43031.known	chr17	+	575	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	1780	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	81871601	True	NA	28	True	ATTAAA	-12	NA	81891719	81900252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81894466_81894587_81899919
transcript_43032.known	chr17	+	563	3	FSM	ENSG00000141552.18	ENST00000579133.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	185.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871653	True	NA	30	True	ATTAAA	-14	NA	81891771	81900254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81894466_81894625_81899919
transcript_43033.known	chr17	+	686	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	1988	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871616	True	NA	28	True	AATAAA	-21	NA	81891734	81900356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891864_81894466_81894587_81899919
transcript_43037.known	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2080	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81891776	False	NA	30	True	ATTAAA	-14	NA	81892062	81900254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81892107_81894466_81894587_81899919
transcript_43039.known	chr17	+	523	3	FSM	ENSG00000141552.18	ENST00000582222.5	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGTTCAAACGGTTCTC	81871604	True	NA	NA	False	NA	NA	NA	81891722	81894807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893551_81893615_81894466
transcript_43042.known	chr17	-	1725	10	FSM	ENSG00000187531.14	ENST00000328666.11	1725	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.0966918352397	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918159	False	2286	-1	True	ATTAAA	-16	NA	81918176	81911938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_43055.known	chr17	-	1346	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	528.060177461251	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTCTTCACCCACTCC	-81925317	True	NA	NA	False	NA	NA	NA	81937239	81932934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
transcript_43059.nnic	chr17	-	1864	8	NNC	ENSG00000183010.17	novel	1346	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	182	junction_7	474.596498864766	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925353	True	NA	-19	True	ATTAAA	-18	NA	81937275	81932390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_43060.known	chr17	-	1904	8	FSM	ENSG00000183010.17	ENST00000619204.4	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_7	351.510501483329	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_43065.nnic	chr17	-	1707	7	NNC	ENSG00000183010.17	novel	1740	7	NA	NA	-18	0	intron_retention	FALSE	canonical	3	182	junction_6	638.425776596013	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925353	True	NA	-12	True	ATTAAA	-25	NA	81937275	81932383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_43066.known	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	557.088388159565	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_43070.known	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	606.730765844474	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_43077.known	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_1	149.68234884433	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925378	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_43078.known	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	524.684356036453	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925335	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_4308.nnic	chr1	+	663	5	NNC	ENSG00000240563.2	novel	3831	4	NA	NA	-25	22726	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	728.660414733777	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCAGCTCCGCATGAAAT	62150864	True	NA	16	True	AATAAA	-17	NA	62194823	62235054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_62194922_62196434_62196529_62223580_62223720_62229757_62229903_62234867
transcript_43083.known	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_7	46.4727399187476	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974773	True	NA	11	True	AATAAA	-19	NA	81977628	82017406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_43088.nnic	chr17	+	1746	16	NNC	ENSG00000169696.16	novel	5503	9	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	111.888515943326	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81977841	True	NA	11	True	AATAAA	-19	NA	81977876	82017406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_81977979_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_4309.known	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	83.1504660239496	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	62150889	True	NA	22	True	ATTAAA	-16	NA	62194848	62212328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
transcript_43090.nnic	chr17	+	1988	16	NNC	ENSG00000169696.16	novel	1919	17	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	116.522653972903	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81977849	False	NA	11	True	AATAAA	-19	NA	81977884	82017406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_81978229_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_43097.nic	chr17	+	1232	13	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_4	117.221626512441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974746	True	NA	11	True	AATAAA	-19	NA	81977601	82017406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_431.known	chr1	+	2196	2	FSM	ENSG00000224870.8	ENST00000418833.2	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAACAAACTGCAAATTA	1397621	True	NA	7	True	GATAAA	-12	NA	1399529	1402026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1400304_1400604
transcript_43102.nic	chr17	+	1272	12	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	43	junction_4	121.880784456922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974777	True	NA	11	True	AATAAA	-19	NA	81977632	82017406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82017114_82017308
transcript_43105.known	chr17	+	720	5	FSM	ENSG00000169696.16	ENST00000581647.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	45.1137451338281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTTGATCATTTTCAA	81974775	True	NA	5	True	AATAAA	-15	NA	81977630	81995150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820
transcript_43107.known	chr17	+	2698	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	13.8099545165797	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	82022099	True	NA	17	True	AATACA	-22	NA	82023304	82031151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
transcript_43113.known	chr17	-	894	5	FSM	ENSG00000169689.15	ENST00000583767.1	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	707.023470261066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCTGGCAGCGCTGC	-82000794	True	NA	NA	False	NA	NA	NA	82022852	82018865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022638
transcript_43114.known	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	681.188116455359	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	-82000821	True	NA	-130	True	NA	NA	NA	82022879	82018800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
transcript_43116.known	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	603.596512581045	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	-82000763	False	NA	-45	True	AATAAA	-6	NA	82022821	82018715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
transcript_43117.known	chr17	-	765	5	FSM	ENSG00000169689.15	ENST00000392359.8	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_2	403.271233166959	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000820	True	NA	-32	True	AATAAA	-19	NA	82022878	82018702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022825
transcript_4312.nnic	chr1	+	2083	4	NNC	ENSG00000240563.2	novel	3831	4	NA	NA	-19	-774	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_2	814.722993142795	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGGTCTCAATGTAGT	62150870	True	NA	45	True	AATAAA	-19	NA	62194829	62211554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_62194922_62196434_62196529_62207511_62207637_62209782
transcript_43121.known	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	530.744936386585	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000800	True	NA	-32	True	AATAAA	-19	NA	82022858	82018702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
transcript_43125.known	chr17	-	752	4	FSM	ENSG00000169689.15	ENST00000580090.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	706.230525788538	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCACATTCCTGCCAC	-82000815	True	NA	NA	False	NA	NA	NA	82022873	82018843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022638
transcript_43126.known	chr17	-	751	4	FSM	ENSG00000169689.15	ENST00000306704.10	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_2	268.254853948007	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000860	True	NA	-32	True	AATAAA	-19	NA	82022918	82018702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022825
transcript_43129.known	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	617.10993077949	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000834	True	NA	-32	True	AATAAA	-19	NA	82022892	82018702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
transcript_43132.known	chr17	-	861	4	FSM	ENSG00000169689.15	ENST00000577379.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	420.721074136086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCCACCCGACA	-82000791	True	NA	NA	False	NA	NA	NA	82022849	82018837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019382_82019640_82019695_82019857_82019910_82022638
transcript_43133.nic	chr17	-	858	4	NIC	ENSG00000169689.15	novel	765	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	907	junction_1	374.433201281914	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000840	True	NA	-32	True	AATAAA	-19	NA	82022898	82018702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_82019382_82019640_82019695_82019857_82019910_82022825
transcript_43140.nic	chr17	-	802	3	NIC	ENSG00000169689.15	novel	751	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1202	junction_1	277	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000838	True	NA	-32	True	AATAAA	-19	NA	82022896	82018702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_82019382_82019857_82019910_82022825
transcript_43142.known	chr17	+	1038	6	FSM	ENSG00000169750.9	ENST00000306897.9	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	27.6072454257936	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	82024436	True	NA	23	True	AATAAA	-16	NA	82031677	82034204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_43143.known	chr17	+	831	5	FSM	ENSG00000169750.9	ENST00000580965.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	16.015617378047	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAAGAAGCCGGGGAA	82024819	False	NA	NA	False	NA	NA	NA	82032060	82033790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_43144.known	chr17	+	730	5	FSM	ENSG00000169750.9	ENST00000584341.1	730	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	63.0966520506437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTCTGCCCGCCCCC	82021025	False	NA	NA	False	NA	NA	NA	82032183	82033772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82032499_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_43151.known	chr17	-	676	8	FSM	ENSG00000169738.8	ENST00000582900.5	676	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_7	336.811822954053	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCATGACCACGGGTT	-82029184	True	NA	NA	False	NA	NA	NA	82037687	82036017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037542_82037630
transcript_43168.known	chr17	-	968	6	FSM	ENSG00000169738.8	ENST00000578885.5	968	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	82.0399902486586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGCTGCCCAGACTA	-82037601	False	NA	-20	True	AATAAA	-3	NA	82037681	82035895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82036064_82036190_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_43170.known	chr17	-	915	7	FSM	ENSG00000169738.8	ENST00000580320.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_6	77.0814864643616	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGCTATTCCTAGGCT	-82029195	True	NA	-3	True	AATAAA	-20	NA	82037698	82035878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449
transcript_43171.known	chr17	+	709	2	FSM	ENSG00000264569.2	ENST00000584705.2	713	2	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	82037858	True	NA	3	True	NA	NA	NA	82037904	82039380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82038414_82039180
transcript_43176.known	chr17	+	1949	14	FSM	ENSG00000169727.13	ENST00000320548.8	1949	14	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_1	460.621396600198	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82051062	False	NA	31	True	ATTAAA	-17	NA	82051874	82057470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82052374_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43182.known	chr17	+	1842	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	352.891026223236	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038808	True	NA	31	True	ATTAAA	-17	NA	82051908	82057470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43183.known	chr17	+	1839	13	FSM	ENSG00000169727.13	ENST00000623691.3	1839	13	0	0	0	0	multi-exon	TRUE	canonical	3	287	junction_5	330.811995533549	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038796	True	NA	31	True	ATTAAA	-17	NA	82051896	82057470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055164_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_4319.nic	chr1	+	478	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-145	5644	-145	-5644	5prime_fragment	FALSE	canonical	3	1727	junction_1	36	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATATCACCTATATGA	62150744	True	NA	72	True	AAGAAA	-3	NA	62194703	62206684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_43198.known	chr17	-	1865	8	FSM	ENSG00000169733.12	ENST00000310496.9	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	34.2046661096621	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	-82049298	True	NA	-1	True	AGTAAA	-19	NA	82051811	82047901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293_82051343_82051499
transcript_432.known	chr1	+	506	2	FSM	ENSG00000215915.10	ENST00000484537.2	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCGGGGTTTGGG	NA	False	NA	NA	False	AATAAA	-36	NA	1462482	1468663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1462709_1468383
transcript_4320.nic	chr1	+	1381	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-145	4741	-145	-4741	5prime_fragment	FALSE	canonical	3	1727	junction_1	36	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAATAAATCAAGGAG	62150744	True	NA	-8	True	NA	NA	NA	62194703	62207587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_43200.known	chr17	-	994	7	FSM	ENSG00000169733.12	ENST00000429557.7	994	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	35.3207524771989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGATGGGTGTTTTGGG	-82048921	False	NA	NA	False	NA	NA	NA	82051434	82048552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293
transcript_43203.known	chr17	-	1078	6	FSM	ENSG00000169733.12	ENST00000578676.5	1078	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	37.3438080543482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCAGCACTTGCGCACC	-82048822	False	NA	NA	False	NA	NA	NA	82051335	82048444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82050007_82050401_82050556_82050661_82050765_82051293
transcript_43204.known	chr17	-	2082	6	FSM	ENSG00000169733.12	ENST00000580953.5	2082	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	37.989472225868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGTGGCTCCTGTCTTA	-82049049	False	79	-5	True	AGTAAA	-15	NA	82051562	82047905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82050556_82050661_82050765_82051293_82051343_82051499
transcript_43206.known	chr17	+	1855	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	485.029058407844	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	82038828	True	NA	24	True	ATTAAA	-10	NA	82051928	82057463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43207.known	chr17	-	1040	4	FSM	ENSG00000169718.18	ENST00000542088.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_3	101.905184689822	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAAAAGTGAACAATAAA	-82060761	False	NA	-45	True	NA	NA	NA	82060775	82057913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700
transcript_4321.known	chr1	+	3507	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	77.792090696934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	62436286	True	NA	78	True	TATAAA	-24	NA	62436303	62451802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_43210.known	chr17	-	513	2	FSM	ENSG00000176155.20	ENST00000584717.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCGTTGTTTATCTG	-82106225	True	NA	-6	True	ATTAAA	-30	NA	82106375	82101459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82101867_82106269
transcript_43212.known	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_2	85.7335810145607	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	-82271026	True	NA	18	True	AAGAAA	-2	NA	82273697	82244361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_43215.known	chr17	-	3712	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	177	junction_1	70.8818338857002	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	NA	False	NA	-13	True	AATAAA	-22	NA	82273731	82242666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_43218.known	chr17	+	2599	5	FSM	ENSG00000141526.18	ENST00000582743.6	2599	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	7.22841614740048	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	82227548	True	NA	NA	False	AATGAA	-15	NA	82229041	82240086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82229107_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_43219.known	chr17	-	1580	9	FSM	ENSG00000141551.15	ENST00000398519.9	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	121.170076751647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCATCTAACCACCA	-82270757	False	NA	-2	True	AATAAA	-17	NA	82273428	82239726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82240063_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_43220.known	chr17	-	1284	4	FSM	ENSG00000173762.8	ENST00000312648.8	1284	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACTTCTGCATTTA	-82317579	True	NA	-7	True	AATAAA	-16	NA	82317608	82314872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82315432_82316194_82316410_82316666_82316982_82317413
transcript_43221.known	chr17	+	1935	2	FSM	ENSG00000182459.5	ENST00000333437.5	1935	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGTAAGTCATTCC	82359115	True	NA	NA	False	CATAAA	-14	NA	82359246	82363775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82359286_82361879
transcript_43222.known	chr17	+	2167	13	FSM	ENSG00000169660.17	ENST00000327949.15	2167	13	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_10	12.4085543969562	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	82416897	True	NA	20	True	AATAAA	-20	NA	82418346	82442645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441076_82441164_82441267_82441799_82441890_82442176
transcript_43226.known	chr17	-	866	7	FSM	ENSG00000178927.18	ENST00000583617.5	866	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	75.8604347176811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGGGTGAACATCCAG	-82447486	True	NA	NA	False	NA	NA	NA	82450717	82443455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82443823_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_43229.known	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	40.303018910912	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-82447521	True	NA	0	True	NA	NA	NA	82450752	82442585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_4323.known	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	16.7760990698076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	62434629	True	NA	80	True	TATAAA	-26	NA	62437048	62451804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_43231.known	chr17	-	2050	6	FSM	ENSG00000178927.18	ENST00000434650.6	2050	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	87.5456452372133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82450635	False	NA	-7	True	CATAAA	-17	NA	82450829	82442643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82450699
transcript_43232.known	chr17	+	1760	13	NNC	ENSG00000141562.19	novel	1722	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	307.759104928947	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTACTTTGGTTTCT	82453958	True	NA	16	True	ATTAAA	-21	NA	82458663	82488265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82481812_82481836_82483186_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43233.known	chr17	+	1454	12	FSM	ENSG00000141562.19	ENST00000582907.5	1454	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	289.685523420379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCAACTCCCCCAAG	82454020	True	NA	NA	False	NA	NA	NA	82458725	82488065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478570_82478668_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_4324.known	chr1	-	2678	16	FSM	ENSG00000116641.18	ENST00000404627.3	2678	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	27.89934288354	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTGTTGATGGAATT	-62686212	True	NA	NA	False	AATAAA	-16	NA	62688368	62584104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_62584879_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_43241.known	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.851929837254	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	82454035	True	NA	27	True	AATAAA	-14	NA	82458740	82490537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43249.known	chr17	+	2598	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	209.43722357137	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	82454006	True	NA	10	True	ATTAAA	-15	NA	82458711	82488259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
transcript_43251.known	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	207.362151147202	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	82458271	False	NA	13	True	ATTAAA	-18	NA	82458648	82488262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43255.known	chr17	-	2322	10	FSM	ENSG00000141580.16	ENST00000572583.5	2322	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.757618814564	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	-82648272	False	NA	-24	True	AATAAA	-20	NA	82648318	82614575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_43256.known	chr17	-	2496	10	FSM	ENSG00000141580.16	ENST00000392325.9	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_8	41.8807831827438	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	-82643029	True	NA	-10	True	AATAAA	-34	NA	82648444	82614561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_43257.nic	chr17	-	2393	9	NIC	ENSG00000141580.16	novel	2496	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	80	junction_7	187.266813330606	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	-82643042	True	NA	-24	True	AATAAA	-20	NA	82648457	82614575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82643948_82644024_82648273
transcript_43262.known	chr17	+	887	7	FSM	ENSG00000141560.15	ENST00000574356.5	887	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.364534228538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTCTGGGCCGGTGAT	82714273	True	NA	NA	False	NA	NA	NA	82716748	82726916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82720760_82720966_82722803_82722887_82726479_82726603_82726832
transcript_43268.known	chr17	+	1822	6	FSM	ENSG00000141560.15	ENST00000269373.11	1822	6	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_4	15.3831076184235	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGATTGTATATTTC	82714230	True	NA	35	True	AATAAA	-45	NA	82716705	82728013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82722803_82722887_82726479_82726603_82726832
transcript_43271.known	chr17	+	627	4	FSM	ENSG00000141560.15	ENST00000573158.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	141.951478408019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATGAGGAATCTGG	82714311	True	NA	NA	False	NA	NA	NA	82716786	82727143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82716897_82722803_82722887_82726479_82726603_82726832
transcript_43274.known	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	120	junction_5	16.1012421881046	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-83050426	True	NA	-6	True	AATAAA	-21	NA	83051810	82943790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_43276.nnic	chr17	-	1324	12	NIC	ENSG00000175711.9	novel	2985	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_8	41.3988860791573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-83050433	True	NA	-6	True	AATAAA	-21	NA	83051817	82943790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_43282.nic	chr18	+	1925	5	FSM	ENSG00000263006.7	ENST00000576266.6	2646	5	88	633	88	-512	multi-exon	FALSE	canonical	3	9	junction_1	18.0969610708539	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTCCGTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	112185	121707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_112555_116841_116921_117042_117305_118296_118505_120700
transcript_43288.known	chr18	-	2033	21	FSM	ENSG00000079134.13	ENST00000580038.5	2033	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	124.25718289097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTACAGTCGGCTGG	-262342	True	NA	-14	True	AATAAA	-14	NA	268022	214520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247909_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_43290.known	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.2741215816939	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262367	True	NA	-13	True	AATAAA	-15	NA	268047	214519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_43292.nic	chr18	-	2144	21	NIC	ENSG00000079134.13	novel	2108	21	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	123.431316933751	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262382	True	NA	-13	True	AATAAA	-15	NA	268062	214519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224201_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_43294.known	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.7223802259079	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262339	True	NA	-13	True	AATAAA	-15	NA	268019	214519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_43297.known	chr18	+	4972	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_10	46.9545406631658	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	147391	True	NA	10	True	AATAAA	-22	NA	158556	214629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_433.known	chr1	+	2330	16	FSM	ENSG00000197785.14	ENST00000536055.6	2330	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	138.973698550801	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1512519	False	NA	28	True	AATAAA	-18	NA	1512529	1534685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1512691_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_43300.known	chr18	+	1681	15	FSM	ENSG00000101557.15	ENST00000400266.7	1681	15	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_2	154.587551971334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTTAGAGGAAGACAC	147370	True	NA	NA	False	AATAAA	-29	NA	158535	211350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_158715_163307_163454_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_43303.known	chr18	+	2131	1	FSM	ENSG00000263884.1	ENST00000581677.1	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATTTAATTCAGAA	267991	True	NA	NA	False	ATTAAA	-19	NA	268147	270278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_268100_270300
transcript_43312.known	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	21.7300611033553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	-710562	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_43313.nnic	chr18	-	1735	16	NNC	ENSG00000132199.20	novel	5362	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	38.5490164163324	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATGTTGCATAACTTG	-710460	True	NA	-14	True	ATTAAA	-18	NA	712528	674000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712345
transcript_43322.known	chr18	-	1296	15	FSM	ENSG00000132199.20	ENST00000585128.6	1296	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	37.9056293272368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTACTTGATTCTT	-710455	True	NA	NA	False	NA	NA	NA	712523	674160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_706469_706579_712503
transcript_43332.known	chr18	-	1745	14	FSM	ENSG00000132199.20	ENST00000581475.5	1745	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	39.6145630982781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGGTATCTGGTATGCA	-710539	True	NA	73	True	AATAAA	-16	NA	712607	673913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690746_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_43338.known	chr18	-	1397	13	FSM	ENSG00000132199.20	ENST00000580982.5	1397	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	51.1172399707009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGCACCTAGACATTA	-710547	True	NA	-53	True	NA	NA	NA	712615	674039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_693881_693909_694247_694335_706469_706579_712503
transcript_4334.known	chr1	+	2890	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	44.2809213996276	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTCTTTAGTCTAAA	62782062	True	NA	3	True	AATAAA	-15	NA	62784134	62865513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_43345.known	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	116.514305273358	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	651141	True	NA	9	True	ATTAAA	-19	NA	657652	673578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
transcript_43348.known	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-658264	False	NA	-9	True	AATAAA	-20	NA	658340	649619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_649965_657841
transcript_43350.known	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	45.5277592190098	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	-804607	True	NA	0	True	ATTAAA	-22	NA	812242	721587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
transcript_43360.known	chr18	-	3684	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	14.0484652186636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-2570661	True	NA	-4	True	ATTAAA	-22	NA	2571505	2537529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_43367.nic	chr18	-	521	2	ISM	ENSG00000101574.15	ENST00000574676.1	613	3	26	424	26	-424	5prime_fragment	FALSE	canonical	3	91	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCAATTTTCCTTAGAA	-2570601	True	NA	NA	False	ATTAAA	-20	NA	2571445	2567430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_2567655_2571148
transcript_43370.known	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	26.943227349373	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	2567824	True	NA	14	True	AATAAA	-20	NA	2571556	2616635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
transcript_43379.nic	chr18	+	1536	7	NIC	ENSG00000080986.13	novel	2126	17	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_6	119.817105994465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCAGTCCTTATTACAG	2567781	True	NA	NA	False	NA	NA	NA	2571513	2582879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2582101
transcript_4338.known	chr1	+	2944	11	FSM	ENSG00000125703.15	ENST00000317868.9	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	34.9422380508175	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTTAGTCTAAATAC	62782059	True	NA	6	True	AATAAA	-18	NA	62784131	62865516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_43380.known	chr18	+	775	4	FSM	ENSG00000132205.11	ENST00000583776.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGCGTGGCCCAGCTG	2905994	False	NA	NA	False	NA	NA	NA	2906568	2913162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_2907086_2908942_2908976_2909690_2909820_2913066
transcript_43384.known	chr18	+	1004	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1851.53468439022	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	3229354	True	NA	-11	True	AATATA	-40	NA	3247812	3256211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
transcript_43388.known	chr18	+	947	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1729.07920260724	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	3247469	False	NA	5	True	ATTAAA	-7	NA	3247480	3256227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
transcript_43391.known	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	223.402476858845	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	3229342	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
transcript_43397.known	chr18	+	1163	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_2	103.866367136924	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGCTTCTAGTCAGATG	3239448	True	NA	NA	False	AGTAAA	-21	NA	3262132	3278461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
transcript_43399.known	chr18	+	1249	4	FSM	ENSG00000118680.14	ENST00000581193.5	1249	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1247.48342229021	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	3262396	False	NA	38	True	AATAAA	-28	NA	3262416	3278284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3262785_3272883_3273083_3277252_3277415_3277764
transcript_434.known	chr1	-	1381	4	FSM	ENSG00000205090.9	ENST00000378733.9	1381	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCGCCTCTTCTGTCAC	-1540534	False	NA	0	True	AGTAAA	-18	NA	1540624	1534777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1535508_1535588_1535798_1539683_1539791_1540289
transcript_43401.known	chr18	+	614	2	FSM	ENSG00000101608.13	ENST00000585090.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACTCGACTTTATG	3229402	True	NA	NA	False	AATAAA	-21	NA	3247860	3249925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247910_3249360
transcript_43402.known	chr18	+	738	1	FSM	ENSG00000101608.13	ENST00000608786.1	738	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTCATGTTC	3229448	False	NA	9	True	AATAAA	-21	NA	3247906	3248644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247900_3248600
transcript_43404.known	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	583.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	3447183	True	NA	NA	False	AATATA	-23	NA	3447608	3459978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3447798_3456353_3456581_3457364
transcript_43406.known	chr18	+	801	3	FSM	ENSG00000177426.22	ENST00000549780.5	801	3	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	601.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGACCTCAACCAGGAC	3448260	False	NA	NA	False	AATACA	-35	NA	3448498	3457839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3448598_3456353_3456581_3457364
transcript_43413.known	chr18	+	563	3	FSM	ENSG00000177426.22	ENST00000549253.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGGGCCAAGATTTCTG	3449361	False	NA	NA	False	NA	NA	NA	3449412	3457456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3449657_3456353_3456581_3457364
transcript_43415.known	chr18	+	1689	3	FSM	ENSG00000177426.22	ENST00000405385.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	3449534	False	NA	12	True	AATAAA	-12	NA	3449650	3458406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3450071_3456353_3456581_3457364
transcript_43419.known	chr18	+	3175	3	FSM	ENSG00000177426.22	ENST00000343820.10	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	151.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	3439063	True	NA	NA	False	AATATA	-23	NA	3450171	3459978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3450506_3456353_3456581_3457364
transcript_43421.known	chr18	+	729	3	FSM	ENSG00000177426.22	ENST00000577543.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	396.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGGGATCAGTTTTGGC	3439103	True	NA	NA	False	NA	NA	NA	3450211	3457604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3450506_3456353_3456581_3457396
transcript_43423.known	chr18	+	1088	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	601.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAACAAAGGGTTTT	3449594	True	NA	-80	True	TATAAA	-11	NA	3451669	3458123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3451772_3456353_3456581_3457364
transcript_43427.known	chr18	+	1980	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	571	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	3449601	True	NA	17	True	AATAAA	-17	NA	3451676	3458411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3452383_3456353_3456581_3457364
transcript_43429.nnic	chr18	+	500	3	NIC	ENSG00000266835.6	novel	623	4	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466113	True	NA	3	True	AATAAA	-19	NA	3466224	3478978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_3466358_3467126_3467271_3478755
transcript_43430.known	chr18	+	450	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACTTGGCACTTAG	3466138	True	NA	-48	True	CATAAA	-35	NA	3466249	3478927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3466358_3467126_3467297_3478755
transcript_43431.known	chr18	+	643	4	FSM	ENSG00000266835.6	ENST00000579007.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.73053390247253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466185	True	NA	3	True	AATAAA	-19	NA	3466296	3478978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3466358_3467126_3467297_3473953_3474143_3478755
transcript_43432.known	chr18	+	613	3	FSM	ENSG00000266835.6	ENST00000581029.5	613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGCTGTTCCCTCAT	3466138	True	NA	NA	False	AATAAA	-23	NA	3466249	3473203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3466358_3467126_3467271_3472842
transcript_43433.nic	chr18	-	435	3	NIC	ENSG00000170579.17	novel	345	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTAAATCAAAATAAAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	4151290	3986416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_3986655_4005115_4005202_4151179
transcript_43434.known	chr18	-	3525	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.19535711353802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	-4452629	True	NA	-9	True	ATTAAA	-20	NA	4455266	3502218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
transcript_43435.known	chr18	+	501	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	42	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.54247233265651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGGGTAGCTGGTTG	3593905	True	NA	16	True	AATAAA	-27	NA	3594111	3597385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
transcript_43436.known	chr18	+	1977	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	0	2	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGTCTC	3593896	True	NA	NA	False	NA	NA	NA	3594102	3598352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3594419_3594485_3596578
transcript_43438.known	chr18	+	391	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	0	7	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	3593905	True	NA	3	True	AATAAA	-14	NA	3594111	3597372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3594419_3594485_3597175
transcript_43440.nnic	chr18	+	727	3	FSM	ENSG00000262001.2	ENST00000691824.1	673	3	-55	1	-11	0	multi-exon	FALSE	canonical	3	13	junction_2	121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3603899	False	NA	8	True	AATAAA	-28	NA	3603916	3610094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553_3606620_3609732
transcript_43441.nnic	chr18	+	809	3	FSM	ENSG00000262001.2	ENST00000687483.1	736	3	-73	0	-72	0	multi-exon	FALSE	canonical	3	44	junction_2	105.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3603843	True	NA	8	True	AATAAA	-28	NA	3603855	3610094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553_3606641_3609732
transcript_43442.nnic	chr18	+	883	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-89	9	-89	0	multi-exon	FALSE	canonical	3	118	junction_2	68.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3603825	False	NA	8	True	AATAAA	-28	NA	3603838	3610094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553_3606698_3609732
transcript_43443.nnic	chr18	+	1019	3	NNC	ENSG00000262001.2	novel	1056	3	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATTTTATTTTT	3603630	True	NA	10	True	AATAAA	-17	NA	3603643	3608465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_3604216_3606553_3606816_3608280
transcript_43445.nnic	chr18	+	865	3	NNC	ENSG00000262001.2	novel	1056	3	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATTTTATTTTT	3603825	False	NA	10	True	AATAAA	-17	NA	3603838	3608465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_3604216_3606553_3606865_3608288
transcript_43450.known	chr18	+	2261	2	FSM	ENSG00000262001.2	ENST00000572856.1	2261	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCACACTGGGGAT	3603724	True	NA	NA	False	NA	NA	NA	3603737	3608336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553
transcript_43452.nnic	chr18	-	864	3	NNC	ENSG00000266268.5	novel	561	5	NA	NA	-34	-194610	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	2.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTACCTAACAT	-5004508	True	NA	NA	False	AATAAA	-21	NA	5004571	5002544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_5003290_5003974_5004004_5004481
transcript_43453.known	chr18	-	825	4	FSM	ENSG00000198081.11	ENST00000582388.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	65.0589476295664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGAGACCCCAGAATC	-5295686	False	742	NA	False	NA	NA	NA	5295702	5291544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
transcript_43454.known	chr18	-	3528	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	52.6898683071254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTTCATTTTTTCA	-5295298	True	NA	1	True	TATAAA	-20	NA	5296040	5289018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
transcript_43457.known	chr18	-	1814	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	-5296179	False	NA	NA	False	NA	NA	NA	5296195	5290857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5292205_5293243_5293328_5295812
transcript_43460.known	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	5237786	True	NA	NA	False	AATAAA	-19	NA	5237825	5239859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_5237800_5239900
transcript_43461.known	chr18	-	3972	21	FSM	ENSG00000082397.18	ENST00000544123.5	3972	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.379358940841	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	-5540545	False	NA	0	True	AATAAA	-25	NA	5540556	5392380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5398020_5398144_5406776_5406969_5407700_5407737_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5540339
transcript_43462.known	chr18	-	867	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1436	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	-6461073	True	NA	NA	False	NA	NA	NA	6463010	6462143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_6462100_6463000
transcript_43463.known	chr18	-	491	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCACATTAACAGATACC	-6729834	False	104	NA	False	NA	NA	NA	6729862	6728820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_6729169_6729719
transcript_43464.known	chr18	-	545	4	FSM	ENSG00000265933.5	ENST00000578497.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGATTCATTTAGT	-6929918	True	NA	NA	False	AATACA	-43	NA	6929962	6927305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_6927585_6928119_6928220_6928850_6928969_6929914
transcript_43468.known	chr18	-	818	2	FSM	ENSG00000265962.2	ENST00000579368.2	896	2	78	0	78	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTAAAATTATTGT	-8707566	False	NA	NA	False	AATAAA	-15	NA	8707621	8695855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_8696122_8707069
transcript_43469.known	chr18	+	1338	9	FSM	ENSG00000101745.17	ENST00000540578.6	1338	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	39.5725204529608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATCAGACTTTAATGG	9128502	True	NA	NA	False	AATAAA	-13	NA	9136804	9235820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
transcript_43470.nic	chr18	+	1732	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-26	31248	-26	464	5prime_fragment	FALSE	canonical	3	29	junction_3	31.2307440673449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGGAAAAGAAAA	9128452	True	NA	46	True	AATAAA	-28	NA	9136754	9254737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43477.nic	chr18	+	1319	8	NIC	ENSG00000101745.17	novel	1338	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	33.9783844855063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATCAGACTTTAATGG	9128452	True	NA	NA	False	AATAAA	-13	NA	9136754	9235820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
transcript_43478.nic	chr18	+	1663	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-26	464	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGGAAAAGAAAA	9128452	True	NA	46	True	AATAAA	-28	NA	9136754	9254737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43479.nic	chr18	+	2179	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-26	-858	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGCATAAAAAAGAAAT	9128452	True	NA	NA	False	ATTAAA	-35	NA	9136754	9255253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43481.nic	chr18	+	3045	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-26	8	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAAGACAGGGAGC	9128452	True	NA	NA	False	AATAAA	-45	NA	9136754	9256119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43482.nic	chr18	+	3508	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-26	471	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAACGGTTGAGAAA	9128452	True	NA	NA	False	AATAGA	-41	NA	9136754	9256582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43483.nic	chr18	+	1768	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	0	464	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	32.0866174659805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGGAAAAGAAAA	9128478	True	NA	46	True	AATAAA	-28	NA	9136780	9254737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9137097_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43492.known	chr18	+	857	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	0	0	0	0	multi-exon	FALSE	canonical	3	3359	junction_2	229.953056433841	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	9082309	True	NA	28	True	AATAAA	-25	NA	9102698	9134341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
transcript_43495.known	chr18	-	770	4	FSM	ENSG00000266053.3	ENST00000582375.2	856	4	0	86	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTTGTAAGGTTA	-9136612	False	NA	1	True	AATAAA	-20	NA	9136645	9121264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_9121457_9132222_9132399_9133390_9133511_9136363
transcript_43497.known	chr18	+	868	2	FSM	ENSG00000178127.13	ENST00000497577.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAACTGTTTTCTG	9082305	True	NA	NA	False	NA	NA	NA	9102694	9103856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9102798_9103091
transcript_43498.nnic	chr18	-	1060	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-47	-7986	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_1	8	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	-9334160	True	NA	NA	False	AATAAA	-18	NA	9334492	9318507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_9319121_9322061_9322153_9334136
transcript_43499.nnic	chr18	-	1121	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-47	-7986	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	6	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	-9334160	True	NA	NA	False	AATAAA	-18	NA	9334492	9318507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_43500.nnic	chr18	-	1007	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-47	-8100	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	6	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAACAATTTCTTTGTA	-9334160	True	NA	2	True	AATAAA	-22	NA	9334492	9318621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_43502.nnic	chr18	+	755	6	NNC	ENSG00000128791.12	novel	2311	7	NA	NA	27	-904	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	120.738394887459	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGTAGGAAAATATC	9330658	True	NA	NA	False	NA	NA	NA	9334799	9396163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_9334921_9337192_9337353_9359971_9360072_9367487_9367631_9388039_9388141_9396033
transcript_43504.known	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	10.3531396204243	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	9330631	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
transcript_43506.known	chr18	+	4368	10	FSM	ENSG00000017797.13	ENST00000019317.8	4368	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	145.072225519856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	9474795	True	NA	17	True	ATTAAA	-28	NA	9475008	9538114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9475177_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_4351.nnic	chr1	+	1406	4	NNC	ENSG00000125703.15	novel	2890	11	NA	NA	-1	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.378039640302	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGGTTTTAA	62782061	True	NA	NA	False	AATAAA	-18	NA	62784133	62865156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_62784226_62834823_62834853_62841427_62841548_62863991
transcript_43510.known	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	51	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	9475544	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9475692_9512990_9513290_9516844
transcript_43512.known	chr18	+	836	3	FSM	ENSG00000017797.13	ENST00000458039.3	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	257.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCAGCCGTTTTCCG	9476079	False	NA	NA	False	NA	NA	NA	9476126	9517221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9476287_9512990_9513290_9516844
transcript_43515.known	chr18	-	3923	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_18	31.2511938830115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	-9613396	True	NA	-18	True	ATTAAA	-19	NA	9614559	9546793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
transcript_43517.known	chr18	-	481	3	FSM	ENSG00000154845.16	ENST00000577779.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCTGCTGTATGACGG	-9613350	True	NA	NA	False	TATAAA	-43	NA	9614513	9594702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_9595103_9614225_9614271_9614477
transcript_43518.known	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	31.6842056692114	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	9706793	True	NA	18	True	AATAAA	-15	NA	9708300	9862551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_43520.known	chr18	+	783	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.619420637395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	9706767	True	NA	NA	False	NA	NA	NA	9708274	9859469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_43522.known	chr18	+	1227	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	629.02907987893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	9891092	True	NA	NA	False	NA	NA	NA	9914061	9954358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
transcript_43523.known	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	85.6434469180217	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	9891046	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
transcript_43526.known	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	18.1121392103986	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	10523397	True	NA	9	True	AATAAA	-18	NA	10526026	10552764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_43532.known	chr18	+	1516	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	82.6161520008562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATGAGTTTGAAAAA	10525682	True	NA	4	True	AATAAA	-20	NA	10525904	10550801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_43535.known	chr18	+	6045	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4618631588204	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11751996	True	NA	28	True	AATAAA	-23	NA	11752084	11885685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_43536.known	chr18	+	3032	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	11848858	True	NA	9	True	ATTAAA	-16	NA	11851412	11854444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11851400_11854400
transcript_43545.known	chr18	-	1636	8	FSM	ENSG00000154889.17	ENST00000309976.13	1636	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	33.4383380116236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	-11906773	True	NA	-7	True	AATAAA	-21	NA	11908350	11884052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11908200
transcript_43546.known	chr18	-	1568	9	FSM	ENSG00000154889.17	ENST00000589731.5	1568	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	24.8193472919817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATATATAAATATAAG	-11906738	True	NA	NA	False	ATTAAA	-44	NA	11908315	11886114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11886622_11886712_11886782_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_43547.known	chr18	-	379	3	FSM	ENSG00000154889.17	ENST00000593001.5	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	9.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGTCTTTGCTGTG	-11906724	True	NA	NA	False	ATTAAA	-30	NA	11908301	11897185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11897357_11906202_11906310_11908200
transcript_43550.nic	chr18	+	1402	8	NIC	ENSG00000141401.12	novel	923	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	284.169825625309	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	NA	False	NA	23	True	AATAAA	-14	NA	11980993	12030877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_11981206_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_43552.known	chr18	+	923	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	285.888589688861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	11980787	False	NA	NA	False	NA	NA	NA	11981036	12030516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_43553.nnic	chr18	+	1264	8	NNC	ENSG00000141401.12	novel	1449	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	285.201039011188	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11974172	True	NA	23	True	AATAAA	-14	NA	11981452	12030877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_11981527_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_43554.known	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	54.8020556742395	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11974226	True	NA	23	True	AATAAA	-14	NA	11981506	12030877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_43557.known	chr18	+	1008	5	FSM	ENSG00000176194.18	ENST00000320477.10	1008	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGACACTTCCTGTG	12254326	True	NA	NA	False	AATAAA	-24	NA	12254360	12277595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12254422_12262824_12262970_12264306_12264454_12274092_12274275_12277122
transcript_43558.known	chr18	+	733	2	FSM	ENSG00000267069.2	ENST00000586226.2	884	2	45	106	45	-106	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTATTTTCTTCTCAC	12288258	True	NA	NA	False	NA	NA	NA	12288307	12291488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12288655_12291102
transcript_4356.known	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	379.945025263159	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
transcript_43560.known	chr18	-	3160	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	0	0	0	multi-exon	TRUE	canonical	3	621	junction_15	63.1699097672302	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCCCTATTTATGC	-12363110	True	NA	-1	True	AATAAA	-29	NA	12377227	12328943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
transcript_43564.known	chr18	+	524	5	FSM	ENSG00000176014.13	ENST00000590693.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	459.135600884967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGCTCACGCACT	12307637	False	NA	NA	False	NA	NA	NA	12307668	12325181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12307770_12308261_12308350_12308686_12308796_12310942_12311054_12325066
transcript_43567.known	chr18	+	788	4	FSM	ENSG00000176014.13	ENST00000586653.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	506.386106532248	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACCGCATCATGAACACC	12289073	True	NA	NA	False	NA	NA	NA	12308240	12325267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324808
transcript_43568.known	chr18	+	1879	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_3	80.6101730552664	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	12289073	True	NA	34	True	CATAAA	-26	NA	12308240	12326616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
transcript_43569.known	chr18	+	1017	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	488.01388869125	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	12289066	True	NA	22	True	ATTAAA	-18	NA	12308233	12329826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
transcript_43572.known	chr18	+	408	3	FSM	ENSG00000176014.13	ENST00000587204.1	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_2	22.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCATAGAAAAAGTGTGA	12289076	True	NA	NA	False	TTTAAA	-35	NA	12308243	12311135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942
transcript_43573.known	chr18	+	1075	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	538	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTCAAGCGCATCTC	12289064	True	NA	NA	False	NA	NA	NA	12308231	12325914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12325066
transcript_43574.known	chr18	+	485	3	FSM	ENSG00000176014.13	ENST00000591463.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	467.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGCTGGTGGAGAA	12289095	True	NA	NA	False	NA	NA	NA	12308262	12325353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12310942_12311054_12325066
transcript_43576.known	chr18	+	430	4	FSM	ENSG00000176014.13	ENST00000590967.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	520.519185258548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAGCCAGAGAGAGGGAA	12289085	True	NA	NA	False	NA	NA	NA	12308252	12337225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12337112
transcript_43577.known	chr18	-	2895	12	FSM	ENSG00000101624.11	ENST00000262127.7	2895	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	13.2121907143015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGGTCAGAGGATT	-12700816	True	NA	NA	False	GATAAA	-26	NA	12702723	12672624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
transcript_43587.known	chr18	+	1070	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_5	20.0866179886566	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	12692827	True	NA	18	True	AATAAA	-19	NA	12703041	12725740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
transcript_43591.known	chr18	+	1036	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_5	22.0036360631601	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGATTAATTATGC	12692808	True	NA	NA	False	AAAAAG	-33	NA	12703022	12724868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
transcript_43595.known	chr18	+	711	5	FSM	ENSG00000128789.21	ENST00000586587.1	711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	258.716060576069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTAAGGGTCTCTTTGCC	12692811	True	NA	-1	True	AGTAAA	-14	NA	12703025	12725658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12724498_12724620_12725438
transcript_43598.known	chr18	-	897	4	FSM	ENSG00000101624.11	ENST00000586887.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	42.8200368467328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGGATATTATTTTTT	-12700870	True	NA	NA	False	TTTAAA	-42	NA	12702777	12698792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12699166_12699829_12699906_12700957_12701114_12702485
transcript_436.known	chr1	-	1284	5	FSM	ENSG00000160075.12	ENST00000291386.4	1284	5	0	0	0	0	multi-exon	FALSE	canonical	3	1714	junction_2	77.3769183930195	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTGGTCCTGAATTC	-1548992	True	NA	-5	True	AATAAA	-16	NA	1574863	1541672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1542168_1543868_1543988_1544862_1545003_1564772_1564917_1574477
transcript_4360.nnic	chr1	-	510	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-24	6	-24	0	multi-exon	FALSE	canonical	0	0	junction_1	848	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63282786	True	NA	-43	True	AATAAA	-24	NA	63321689	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321583
transcript_43601.known	chr18	+	377	3	FSM	ENSG00000128789.21	ENST00000585853.2	377	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCCCAGGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	12658042	12663471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12658206_12658573_12658774_12663457
transcript_43603.known	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	153.652725325651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-12881081	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_4361.nic	chr1	-	1253	3	FSM	ENSG00000230798.6	ENST00000686286.1	1247	3	-12	6	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	414	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63322498	False	NA	-43	True	AATAAA	-24	NA	63322513	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321664
transcript_43610.known	chr18	-	1706	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_5	56.5340496111158	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	-12881205	False	NA	-1	True	ATTAAA	-19	NA	12884338	12785477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_43614.known	chr18	-	3470	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	52.9362824535309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTGTCCTGATTCA	-12881104	True	NA	-2	True	ATTAAA	-17	NA	12884237	12792151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_43632.known	chr18	+	3494	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	43.0985426087704	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	12937468	True	NA	21	True	AATAAA	-32	NA	12947994	12987536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_43638.nic	chr18	+	1536	8	NIC	ENSG00000085415.16	novel	3494	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_2	264.287104243449	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTGAGTGCTGATTT	12937461	True	NA	NA	False	AATAAA	-15	NA	12947987	12985718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_12948233_12951854_12951906_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_4364.known	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	277	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319595	True	NA	-43	True	AATAAA	-24	NA	63322458	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63322315
transcript_43640.known	chr18	+	6236	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	27.2509003566476	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721506	True	NA	13	True	AATAAA	-20	NA	13726672	13764556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_43641.known	chr18	+	1849	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.7480157480236	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCCACAGTGTTCAGA	13721493	True	NA	8	True	CATAAA	-31	NA	13726659	13760285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_43642.nic	chr18	+	915	5	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-36	27449	-23	5286	5prime_fragment	FALSE	canonical	3	48	junction_1	32.3911639185751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	13721470	True	NA	NA	False	NA	NA	NA	13726636	13737107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009
transcript_43644.nic	chr18	+	782	4	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-19	23178	-19	5286	5prime_fragment	FALSE	canonical	3	89	junction_1	18.8030730348939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	13721474	True	NA	NA	False	NA	NA	NA	13726640	13737107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009
transcript_43645.known	chr18	-	1091	4	FSM	ENSG00000177150.13	ENST00000592976.5	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_2	5.31245915016974	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAATAAGGTGCC	-13723181	True	NA	70	True	AAAAAG	-13	NA	13726586	13666493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
transcript_43649.nic	chr18	+	568	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-36	32735	-23	0	5prime_fragment	FALSE	canonical	3	48	junction_1	17	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	13721470	True	NA	NA	False	AAAAAG	-25	NA	13726636	13731821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_43651.nic	chr18	+	450	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-19	28449	-19	15	5prime_fragment	FALSE	canonical	3	89	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGAGGATGTTCCA	13721474	True	NA	NA	False	AAAAAG	-40	NA	13726640	13731836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13731475
transcript_43658.known	chr18	-	826	4	FSM	ENSG00000175322.12	ENST00000586507.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.8059820457696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTCAAAGAATGAGT	-14131069	True	NA	NA	False	AATAAA	-43	NA	14132438	14122162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14122604_14123113_14123208_14124349_14124477_14132274
transcript_4366.known	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	31	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63323567	False	NA	-43	True	AATAAA	-24	NA	63323582	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63323490
transcript_43660.known	chr18	-	2117	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131059	True	NA	-13	True	AATAAA	-26	NA	14132428	14099937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14101774_14124349_14124477_14132274
transcript_43662.known	chr18	-	6760	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131066	True	NA	-13	True	AATAAA	-26	NA	14132435	14099937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14106410_14124349_14124477_14132274
transcript_43665.known	chr18	-	599	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATGAATGTGAAAAAGT	-14131088	True	NA	NA	False	AGTAAA	-37	NA	14132457	14105993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14106410_14132274
transcript_43669.known	chr18	-	589	2	FSM	ENSG00000175322.12	ENST00000591987.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACCACGTCTGGCT	-14131063	True	NA	NA	False	NA	NA	NA	14132432	14124045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14124477_14132274
transcript_4367.known	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	145	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63324426	False	NA	-43	True	AATAAA	-24	NA	63324441	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63324354
transcript_43671.known	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_3	28.0592643176828	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-21595721	True	NA	14	True	AATAAA	-42	NA	21600704	21529283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_43676.nic	chr18	-	1403	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-18	45242	-18	18498	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTATCTCAGAAAAAAT	-21600837	False	NA	NA	False	AATAAA	-45	NA	21600902	21574544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_43681.known	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	5573	junction_3	265.557275680157	3438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	21554396	True	NA	17	True	AATAAA	-14	NA	21612313	21633520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
transcript_43682.known	chr18	+	320	4	FSM	ENSG00000167088.11	ENST00000579618.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	2533.03314010869	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAAGAGGGGGTCCT	21554396	True	NA	43	True	NA	NA	NA	21612313	21629109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_21612444_21622724_21622802_21623874_21623940_21629061
transcript_43684.known	chr18	+	723	3	FSM	ENSG00000167088.11	ENST00000582475.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	2695	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATAGGCTCAGAGGCT	21554413	True	NA	NA	False	NA	NA	NA	21612330	21629479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_21612444_21623747_21623940_21629061
transcript_43691.known	chr18	+	3275	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	26.6149962369217	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930385	True	NA	15	True	AATACA	-16	NA	22933327	23026486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_43693.known	chr18	+	3293	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	46.7478130471507	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	22930883	False	NA	17	True	AATACA	-18	NA	22933825	23026488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_43697.nic	chr18	+	3183	18	NIC	ENSG00000101773.19	novel	3275	19	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	49.0880150137799	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930407	True	NA	15	True	AATACA	-16	NA	22933349	23026486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23016827_23016925_23022128_23022271_23026142
transcript_437.known	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-1548713	False	25871	3	True	AATAAA	-31	NA	1574584	1560847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1564917_1574477
transcript_43702.known	chr18	+	3260	18	FSM	ENSG00000101773.19	ENST00000399725.6	3260	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	66.3991808012167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930898	False	NA	15	True	AATACA	-16	NA	22933840	23026486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23022128_23022271_23026142
transcript_43707.known	chr18	+	2229	11	FSM	ENSG00000101773.19	ENST00000399721.6	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	58.3030016379946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	22932815	True	NA	NA	False	AATAAA	-45	NA	22933875	22993569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22934265_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_43708.known	chr18	-	2994	15	FSM	ENSG00000134490.14	ENST00000383233.8	2994	15	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_7	13.3973801886177	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACTTGTTTCTGAACC	-23436199	True	NA	-24	True	AATAAA	-16	NA	23437961	23296012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_43718.known	chr18	+	3574	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_5	10.2479672781159	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	23451959	True	NA	19	True	ATTAAA	-21	NA	23453286	23483140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_43720.known	chr18	+	1904	13	FSM	ENSG00000101782.15	ENST00000577501.5	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	34.0657044873906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAACAGCTATAGGTT	23451980	True	NA	25	True	AATAAA	-39	NA	23453307	23481500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479325_23479425_23481171
transcript_43721.known	chr18	+	2200	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	80	junction_18	14.1646432751966	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATAGAACTTGTGGG	23502114	True	NA	NA	False	TATAAA	-42	NA	23503510	23531822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_43722.known	chr18	-	846	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTTTTCCTGAAAACA	-23662281	True	NA	-21	True	AATAAA	-15	NA	23662772	23648410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_23649194_23662709
transcript_43725.nic	chr18	+	919	3	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	53205	0	1573	0	3prime_fragment	FALSE	canonical	2	4	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAATATGAAACTTT	23951390	True	NA	NA	False	ATTAAA	-15	NA	23951465	23954989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_23951778_23952989_23953110_23954502
transcript_43727.known	chr18	-	4152	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_19	98.4212134337526	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-24392538	True	NA	-8	True	AATAAA	-16	NA	24397824	24162051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_4373.known	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63321514	False	NA	-43	True	AATAAA	-24	NA	63321529	63320883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366
transcript_43740.known	chr18	-	588	5	FSM	ENSG00000141447.19	ENST00000582350.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.3752713454493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATATTGGCCAGACTG	-24392498	True	NA	NA	False	NA	NA	NA	24397784	24347664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_43742.known	chr18	-	1887	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	94.1524694312369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	-24392502	True	NA	-13	True	AATAAA	-15	NA	24397788	24357124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
transcript_43743.nic	chr18	-	1929	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	79.9202727723073	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	-24392626	True	NA	-13	True	AATAAA	-15	NA	24397912	24357124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_43751.nnic	chr18	-	1577	5	NNC	ENSG00000141447.19	novel	1002	5	NA	NA	-32	4078	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	86.8058177773817	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGACTTTGTGGGGTTT	-24392626	True	NA	-1	True	AATAAA	-26	NA	24397912	24362326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_24363362_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_43754.known	chr18	-	1002	5	FSM	ENSG00000141447.19	ENST00000582618.1	1002	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	101.696546155708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTCCAGGGAGGGTAG	-24392555	True	NA	NA	False	NA	NA	NA	24397841	24366404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24366967_24368286_24368373_24368545_24368590_24377412_24377536_24397654
transcript_43757.nic	chr18	-	1238	4	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-71	18474	0	266	5prime_fragment	FALSE	canonical	3	203	junction_1	10.6562449087639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGGCTGCTCTAGC	-24392569	True	NA	1	True	AATAAA	-22	NA	24397855	24366138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_24366967_24368286_24368373_24377412_24377536_24397654
transcript_43760.nic	chr18	-	820	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-128	20269	-32	0	5prime_fragment	FALSE	canonical	3	214	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAACAATGTCACA	-24392626	True	NA	NA	False	AATAAA	-7	NA	24397912	24367933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_43764.known	chr18	+	1305	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	13.4669966956259	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137516	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
transcript_43765.known	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	9.79795897113271	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137549	True	NA	23	True	AATAAA	-13	NA	24139094	24161597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
transcript_43766.known	chr18	+	1792	6	FSM	ENSG00000154040.21	ENST00000463087.5	1792	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	21.6388539437744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137512	True	NA	26	True	AATAAA	-16	NA	24139057	24161600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159945_24160070_24161515
transcript_43767.nic	chr18	+	1406	5	ISM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	1345	0	-10	5prime_fragment	FALSE	canonical	3	22	junction_4	14.9059551857638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACTGTACCACAATGAC	24137516	True	NA	NA	False	AATAAA	-11	NA	24139061	24160255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471
transcript_43769.nic	chr18	+	2476	5	ISM	ENSG00000154040.21	ENST00000621648.4	2226	6	-127	1323	-19	9	5prime_fragment	FALSE	canonical	3	33	junction_4	10.4283268073071	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGCCAAGGATTTGATG	24137422	True	NA	NA	False	AATAAA	-30	NA	24138967	24160274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471
transcript_4377.nic	chr1	+	1825	15	NIC	ENSG00000088035.18	novel	2055	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	90.4914022299965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGGAGACCAAAG	63365044	True	NA	-14	True	NA	NA	NA	63367579	63437182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411156_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_43772.known	chr18	+	1109	4	FSM	ENSG00000154040.21	ENST00000327201.10	1109	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.5205956357638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137486	True	NA	23	True	AATAAA	-13	NA	24139031	24161597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24155700_24156043_24159471_24160070_24161515
transcript_43773.nic	chr18	+	2041	4	NIC	ENSG00000154040.21	novel	2252	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	16.2138486760204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137514	True	NA	26	True	AATAAA	-16	NA	24139059	24161600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_24139119_24155700_24157000_24159471_24160070_24161515
transcript_43774.known	chr18	+	1664	5	FSM	ENSG00000154040.21	ENST00000486759.6	1664	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	23.7644692766323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137516	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24161515
transcript_43775.known	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	78.7412332782629	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	24426620	False	NA	-12	True	NA	NA	NA	24426633	24453510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
transcript_43779.nnic	chr18	+	1452	12	NIC	ENSG00000154059.11	novel	3734	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	83.2710400781837	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	24422412	True	NA	9	True	AATAAA	-20	NA	24426669	24453531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450868_24453149
transcript_43781.known	chr18	+	3734	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	14.7461859475595	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	24422412	True	NA	9	True	AATAAA	-20	NA	24426669	24453531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
transcript_43790.known	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_3	224.36187287505	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-26082077	True	NA	-26	True	AATAAA	-17	NA	26090613	26016252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_43791.known	chr18	-	2321	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	270.512476606903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-26090364	True	NA	-15	True	ATTAAA	-13	NA	26091217	26017342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_43793.known	chr18	-	1840	11	FSM	ENSG00000141380.14	ENST00000579640.5	1840	11	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_8	246.225201797054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGCATCAGAAATCCTC	-26082074	True	NA	58	True	NA	NA	NA	26090610	26017884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26082362_26082529_26087500_26087578_26090500
transcript_43801.known	chr18	-	1836	10	FSM	ENSG00000141380.14	ENST00000269137.11	1836	10	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	59.1466058844827	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTAATACTTTTCCAC	-26090048	False	NA	-71	True	NA	NA	NA	26090901	26018013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_4381.known	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	76.1510314561578	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	63365091	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_43810.known	chr18	+	1794	7	FSM	ENSG00000154611.15	ENST00000415576.7	1794	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTGTTTTAATTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	26133868	26193355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_26134068_26144558_26144686_26151857_26151983_26158121_26158245_26178829_26178950_26179067_26179131_26192318
transcript_43811.known	chr18	-	814	5	FSM	ENSG00000134504.14	ENST00000580191.5	814	5	0	0	0	0	multi-exon	TRUE	canonical	2	17	junction_4	8.55862138431185	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCTCTGGACTAAATG	-26657224	True	NA	NA	False	GATAAA	-3	NA	26657401	26455759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26657359
transcript_43814.known	chr18	-	11379	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	70.4573629935154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCTGTGCATATTTC	-27181056	True	NA	-5	True	AATAAA	-23	NA	27185308	26906480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_43824.known	chr18	-	2033	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	103.572438418722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTGGACTTAGGCA	-27181046	True	NA	-6	True	GATAAA	-13	NA	27185298	26915778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_43831.known	chr18	-	4016	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	10.1893190264228	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	-28176192	True	NA	-3	True	AATAAA	-20	NA	28177130	27950965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
transcript_43833.nnic	chr18	+	690	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTCTAATCAACAGATA	31818515	True	NA	14	True	AATAAA	-18	NA	31819294	31829908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr18_+_31819445_31829368
transcript_43836.nnic	chr18	+	3511	9	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	181.282066129002	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	32084710	True	NA	10	True	ATTAAA	-16	NA	32091865	32131561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131024
transcript_43838.known	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	63.9639566873567	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	32084718	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_4384.known	chr1	+	1841	15	FSM	ENSG00000088035.18	ENST00000647818.1	1841	15	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_7	72.8532561988516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGGAACCACAGGAAAG	63365039	True	NA	-70	True	TATAAA	-20	NA	63367574	63437126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411254_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_43842.nnic	chr18	+	3212	8	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.855494089288	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	32085473	False	NA	10	True	ATTAAA	-16	NA	32092628	32131561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131024
transcript_43846.nic	chr18	+	2414	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	755	846	19	0	3prime_fragment	FALSE	canonical	3	491	junction_1	36.922215534824	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32085473	False	NA	7	True	AATAAA	-15	NA	32092628	32130715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_43847.nic	chr18	+	2511	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	755	749	19	97	3prime_fragment	FALSE	canonical	3	491	junction_1	36.922215534824	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGCCTTTGTTCTGTCA	32085473	False	NA	9	True	AAGAAA	-20	NA	32092628	32130812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_43851.known	chr18	+	5573	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.6712272491657	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTACTATTTTACTC	32018763	True	NA	42	True	ATTAAA	-31	NA	32018824	32073219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
transcript_43862.known	chr18	+	2071	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	229.18224189496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32090338	True	NA	7	True	AATAAA	-15	NA	32092689	32130715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_43866.known	chr18	-	473	2	FSM	ENSG00000265008.1	ENST00000582233.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-32092045	False	NA	NA	False	NA	NA	NA	32092119	32091294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_32091503_32091854
transcript_43871.known	chr18	+	1706	13	FSM	ENSG00000134769.23	ENST00000315456.10	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.1266761677062	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	34492135	True	NA	10	True	AATAAA	-20	NA	34493316	34829328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34829040
transcript_43872.known	chr18	+	4212	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	24.9844396019247	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGGAGTTACAGATT	35038199	True	NA	17	True	AATAAA	-21	NA	35041412	35143470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_43875.nnic	chr18	+	2263	5	NNC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	12.8452325786651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_35241110_35241601_35241691_35242390_35242885_35243151_35243294_35245261
transcript_43878.nic	chr18	+	2136	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.7531091641721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_35241072_35242390_35242885_35243151_35243294_35245261
transcript_43880.known	chr18	+	5259	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.6144555520604	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	35236485	True	NA	NA	False	ATTAAA	-18	NA	35241033	35249808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
transcript_43883.nnic	chr18	+	2266	4	NNC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.779617264871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_35241110_35242390_35242885_35243151_35243386_35245261
transcript_43884.nnic	chr18	+	2355	4	NNC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.779617264871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_35241110_35242390_35242885_35243151_35243475_35245261
transcript_43886.nic	chr18	+	2744	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	-6	2623	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.0369800568452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236496	True	NA	NA	False	ACTAAA	-14	NA	35241044	35246723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
transcript_43888.known	chr18	-	4122	4	FSM	ENSG00000186814.14	ENST00000333206.10	4122	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	18.2391520270726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-35289520	True	NA	-4	True	AATAAA	-16	NA	35290229	35251061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35290083
transcript_4389.known	chr1	+	1887	14	FSM	ENSG00000088035.18	ENST00000648964.1	1887	14	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	92.1490945224193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTATATGGAGA	63365067	True	NA	-20	True	NA	NA	NA	63367602	63437176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63367688_63370770_63371060_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_43892.known	chr18	+	1516	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	11.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	35236488	True	NA	3	True	ATTAAA	-17	NA	35241036	35244100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390_35242885_35243151
transcript_43896.known	chr18	+	2046	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	35236508	True	NA	-28	True	NA	NA	NA	35241056	35244069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241691_35242390_35242885_35243151
transcript_43899.known	chr18	+	690	2	FSM	ENSG00000186812.13	ENST00000589630.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCATACTTGTCT	NA	False	NA	NA	False	GATAAA	-39	NA	35241029	35243000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390
transcript_439.nic	chr1	+	550	3	NIC	ENSG00000197530.13	novel	592	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	1614928	True	NA	17	True	AATAAA	-27	NA	1615436	1617323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_1615634_1616507_1616615_1617077
transcript_43904.known	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	84	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	35287696	True	NA	NA	False	NA	NA	NA	35290335	35308110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35290392_35305975
transcript_43909.known	chr18	-	6256	4	FSM	ENSG00000172466.16	ENST00000261332.11	6256	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	89.9123029525005	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	-35339122	True	NA	-20	True	AATAAA	-21	NA	35344420	35332226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344359
transcript_43910.known	chr18	-	6282	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	16.1314048434171	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	-35339158	True	NA	-20	True	AATAAA	-21	NA	35344456	35332226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
transcript_43911.nic	chr18	-	960	4	NIC	ENSG00000172466.16	novel	7419	3	NA	NA	-24	1359	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	98.6891866191811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGGGCTGATATTTTC	-35339182	True	NA	1	True	AATAAA	-23	NA	35344480	35338875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_35339074_35339828_35339977_35340230_35340734_35344369
transcript_43920.known	chr18	-	3245	5	FSM	ENSG00000153391.16	ENST00000592173.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	132.222114262328	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTCACTTGGTCATG	-35494553	True	NA	-9	True	AATAAA	-20	NA	35497933	35452229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35454969_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_43922.known	chr18	-	408	5	FSM	ENSG00000153391.16	ENST00000591139.1	408	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	121.48328074266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCACCATTGAAGAGT	-35487083	False	NA	NA	False	NA	NA	NA	35487470	35468710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385
transcript_43924.known	chr18	-	943	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	17.0055138117024	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-35494580	True	NA	-7	True	AATAAA	-18	NA	35497960	35468332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_43926.known	chr18	-	455	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	-35494560	True	NA	-2	True	AATAAA	-17	NA	35497940	35443870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35444023_35446874_35446956_35497718
transcript_43928.known	chr18	-	382	3	FSM	ENSG00000153391.16	ENST00000587450.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGACGTCGTCACCGG	-35494580	True	NA	NA	False	NA	NA	NA	35497960	35468670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35497718
transcript_43929.known	chr18	-	595	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTCCCTGAATTTT	-35494524	True	NA	-8	True	AATAAA	-17	NA	35497904	35468333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35497718
transcript_43932.known	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	30.1122898498271	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	35968984	True	NA	8	True	TATAAA	-19	NA	35972678	35979278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
transcript_43943.known	chr18	+	703	4	FSM	ENSG00000141428.17	ENST00000269194.10	703	4	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	137.211110661232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGATTCCAAAGGTGG	35968939	True	NA	NA	False	ACTAAA	-25	NA	35972633	35978939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
transcript_43945.known	chr18	-	1264	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	256.842761396214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAACGAGTAATTTATA	-36052797	True	NA	NA	False	AAGAAA	-12	NA	36067559	35993039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_4395.known	chr1	+	2047	16	FSM	ENSG00000088035.18	ENST00000649570.1	2047	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	102.776694288583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTATATGGAGA	63365107	True	NA	-20	True	NA	NA	NA	63367642	63437176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411681_63411807_63411925_63412062_63414070_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_43950.nic	chr18	-	2312	7	ISM	ENSG00000141425.18	ENST00000588737.5	1264	8	-8	32559	-8	0	5prime_fragment	FALSE	canonical	3	75	junction_5	277.339993910403	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052805	True	NA	-7	True	AATAAA	-13	NA	36067567	36025598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_43954.known	chr18	-	4421	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	77.6410902093015	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-36052797	True	NA	-1	True	AATAAA	-25	NA	36067559	35989823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_43955.known	chr18	-	1022	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	237.753665703719	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052795	True	NA	-7	True	AATAAA	-13	NA	36067557	36025598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_43956.known	chr18	-	3003	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	73.3572351620294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTGGGGAGGCAT	-36122842	True	NA	NA	False	AATAAA	-17	NA	36129381	36109147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
transcript_43957.known	chr18	-	3566	10	FSM	ENSG00000141424.13	ENST00000269187.10	3566	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_8	37.4396633940762	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36122801	True	NA	-1	True	AATAAA	-19	NA	36129340	36108530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129113
transcript_43958.nic	chr18	-	2822	9	NIC	ENSG00000141424.13	novel	3566	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	81.087048133472	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36122855	True	NA	-1	True	AATAAA	-19	NA	36129394	36108530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36129113
transcript_43959.nnic	chr18	-	1230	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-54	-267	-54	267	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAATTAAGT	-36122855	True	NA	NA	False	NA	NA	NA	36129394	36127778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36128728_36129113
transcript_4396.nic	chr1	-	1124	11	NIC	ENSG00000142856.17	novel	1044	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	232.263126647344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518886	True	NA	-10	True	AATAAA	-19	NA	63523221	63440769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
transcript_43961.known	chr18	+	2722	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	157.084128904606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	36123873	True	NA	17	True	AATAAA	-23	NA	36129897	36174651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_43968.known	chr18	+	8432	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	49.7146962216221	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	36123874	True	NA	8	True	AATAAA	-22	NA	36129898	36180557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_4397.known	chr1	-	1285	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	183.361883298884	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523502	63440772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_43970.known	chr18	+	2542	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_18	121.659015694577	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	36123876	True	NA	27	True	NA	NA	NA	36129900	36174721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
transcript_43975.nnic	chr18	+	2403	21	NIC	ENSG00000134759.14	novel	2722	23	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_19	119.214208465266	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	36123863	True	NA	17	True	AATAAA	-23	NA	36129887	36174651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36171046_36171161_36174484
transcript_4398.known	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	207.667528682594	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	-63518859	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
transcript_43987.known	chr18	+	2453	21	FSM	ENSG00000134759.14	ENST00000351393.10	2453	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	123.868428180873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	36123866	True	NA	14	True	AATAAA	-20	NA	36129890	36174648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_43997.known	chr18	+	2385	19	FSM	ENSG00000134759.14	ENST00000423854.6	2385	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	135.239111517159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTGAGTTTCTGGGTT	36123874	True	NA	26	True	NA	NA	NA	36129898	36174720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_44.known	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00116_+_0_2000
transcript_440.known	chr1	+	584	3	FSM	ENSG00000197530.13	ENST00000511910.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	213.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1627608	False	NA	9	True	TATAAA	-15	NA	1629105	1630603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1629312_1629638_1629705_1630291
transcript_44013.known	chr18	+	583	3	FSM	ENSG00000134759.14	ENST00000541190.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_2	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAAGTTTTTTTCT	36123869	True	NA	NA	False	NA	NA	NA	36129893	36136632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306
transcript_44014.known	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	2	16	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-36187346	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36180391_36187234
transcript_44015.known	chr18	+	636	3	FSM	ENSG00000134759.14	ENST00000536830.1	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGAGATGGAGTCTT	36169918	False	NA	51	True	NA	NA	NA	36169935	36174745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36170197_36171046_36171161_36174484
transcript_44016.known	chr18	+	6182	15	FSM	ENSG00000075643.6	ENST00000261326.6	6182	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	6.61669194121186	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAATTTTCTTTGCTTTG	36185725	True	NA	18	True	ATTAAA	-19	NA	36187496	36272157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36187682_36195256_36195347_36198689_36198757_36199682_36200325_36203112_36203190_36205076_36205277_36213365_36213483_36215515_36215978_36220054_36220218_36248921_36249001_36251158_36251284_36256967_36257074_36260036_36260176_36266748_36266854_36268532
transcript_44021.nnic	chr18	+	667	6	NNC	ENSG00000150477.15	novel	4853	10	NA	NA	-5	10981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.3153517752613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTTATAATGTGTGTG	36827534	True	NA	5	True	ATTAAA	-18	NA	36829100	36897385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36897204
transcript_44023.known	chr18	+	1190	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	2.8613807855649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTTGTAATTGGTA	36827562	True	NA	NA	False	ATTAAA	-19	NA	36829128	36886404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
transcript_44030.known	chr18	-	1268	7	FSM	ENSG00000134779.15	ENST00000614939.4	1268	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	379.520750420843	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGTACATGTATG	NA	False	NA	0	True	AATAAA	-43	NA	36829216	36780026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36780189_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44031.known	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	329.843734045212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-36828774	False	NA	-4	True	AATAAA	-16	NA	36828842	36786572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44034.known	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_1	91.5600895587155	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-36825170	True	NA	-14	True	ACTAAA	-20	NA	36829002	36794107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44036.known	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	403.702068362301	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	-36828918	False	NA	-26	True	TATAAA	-17	NA	36828986	36796071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
transcript_44037.known	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	76.8749634146254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	-36823822	True	NA	-21	True	CATAAA	-14	NA	36828781	36798017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_4404.known	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	77.2551575948169	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518890	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_44041.known	chr18	-	579	2	FSM	ENSG00000101489.20	ENST00000590011.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGGCTGGGGCAAGTGG	-37253849	True	NA	NA	False	GGGGCT	-22	NA	37253981	37244833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_37245198_37253766
transcript_44044.nnic	chr18	-	772	4	NIC	ENSG00000267313.7	novel	549	5	NA	NA	0	-1648	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	10.8730042868667	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGCCATGCTCTGGG	-41631393	True	NA	4	True	AATAAA	-16	NA	41632128	41467430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_41467781_41501119_41501277_41516419_41516556_41631999
transcript_44049.known	chr18	+	9415	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_11	17.5639703813106	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	41952088	True	NA	NA	False	AATAAA	-20	NA	41955233	42087830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_44054.known	chr18	+	9206	24	FSM	ENSG00000078142.14	ENST00000398870.7	9206	24	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	31.0198424209171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	41952108	True	NA	NA	False	AATAAA	-20	NA	41955253	42087830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_41955360_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_44060.known	chr18	-	3936	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	-43277465	False	NA	-25	True	AATAAA	-18	NA	43277490	43267891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
transcript_44061.known	chr18	-	3000	15	FSM	ENSG00000152229.18	ENST00000409746.5	3000	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	4.26662414944802	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCGTATTTTTGTGT	-46071925	True	NA	-12	True	AATAAA	-20	NA	46072260	45983535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_45985451_45988701_45988760_45990721_45990757_45991901_45991984_45992105_45992203_45993604_45993704_45997748_45997829_45998793_45998840_45999435_45999535_46005468_46005532_46011180_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
transcript_44065.known	chr18	-	1945	13	FSM	ENSG00000152234.16	ENST00000282050.6	1945	13	0	0	0	0	multi-exon	FALSE	canonical	1	399	junction_12	1906.8349048008	6061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTCATTTGTGTTA	-46104081	True	NA	-10	True	AATAAA	-20	NA	46104233	46084143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171_46098280_46104136
transcript_44066.known	chr18	-	1931	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	2100.04038135122	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055830	True	NA	-16	True	AATAAA	-14	NA	46098295	46084149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
transcript_44067.known	chr18	-	1793	12	FSM	ENSG00000152234.16	ENST00000590665.5	1793	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2104.62781303606	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055831	True	NA	-16	True	AATAAA	-14	NA	46098296	46084149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089888_46089997_46091681_46091852_46095052_46095132_46098171
transcript_44070.known	chr18	+	1079	10	FSM	ENSG00000152240.13	ENST00000593165.5	1079	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	461.195574593568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCATAATTGATAGA	46096012	False	NA	-69	True	NA	NA	NA	46104421	46128239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46109646_46109785_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_44083.known	chr18	+	1072	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_4	64.3229158232119	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	46095975	True	NA	25	True	ATTAAA	-16	NA	46104384	46128333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_44090.known	chr18	+	1098	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	365.02754604961	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	46095986	True	NA	22	True	ATTAAA	-13	NA	46104395	46128330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_441.known	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_16	45.9945197265429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-1652993	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_44103.known	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	419.201787793049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	46095996	True	NA	58	True	AATAAA	-30	NA	46104405	46128169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_44105.known	chr18	+	506	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	438.021734620555	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	46095992	True	NA	68	True	AATAAA	-40	NA	46104401	46128179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_4411.nic	chr1	-	1170	8	NIC	ENSG00000142856.17	novel	945	6	NA	NA	41	-155	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	177.928901186825	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTAAATAATTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	63523461	63449457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_63449816_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_44110.known	chr18	+	5456	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	54.8497948947852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	46171806	True	NA	26	True	AATAAA	-23	NA	46174033	46266992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
transcript_44113.known	chr18	+	5264	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	14.522013940528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	46171806	True	NA	17	True	AATAAA	-14	NA	46174033	46266983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
transcript_44115.known	chr18	+	3744	2	FSM	ENSG00000152242.11	ENST00000619230.1	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCGGCACTAGATCAT	46173984	False	NA	NA	False	TTTAAA	-26	NA	46174018	46219242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46174331_46215810
transcript_44117.nnic	chr18	-	335	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATCCAAAGAATTTCT	-46433435	False	NA	NA	False	AATAAA	-17	NA	46433578	46429231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr18_-_46429415_46433426
transcript_44122.known	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	63.5668589921681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-46910744	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44127.nic	chr18	-	1914	14	NIC	ENSG00000078043.16	novel	4543	13	NA	NA	15	-160	combination_of_known_junctions	FALSE	canonical	3	67	junction_13	133.608143818686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGAGTGGAAAACAGC	-46910642	True	NA	-17	True	AATAAA	-15	NA	46917405	46818350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46903526_46903636_46917321
transcript_44128.known	chr18	-	2043	13	FSM	ENSG00000078043.16	ENST00000398654.7	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	126.823669145612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGCAACAAGAACCAAA	-46910691	True	NA	NA	False	NA	NA	NA	46917454	46812279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46890579_46891055_46917321
transcript_4413.known	chr1	-	873	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	182.970723653501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGATTTTGAGCTATA	-63518847	True	NA	NA	False	ATTAAA	-15	NA	63523182	63451724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_44130.known	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	65.384068310934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-46910740	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44133.nic	chr18	-	1709	12	ISM	ENSG00000078043.16	ENST00000324794.11	4543	13	98	5221	15	-2741	5prime_fragment	FALSE	canonical	3	389	junction_1	27.9104234209585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGAGTGTTTTTGTTT	-46910642	True	NA	NA	False	NA	NA	NA	46917405	46820931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44135.known	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_2	25.9383885389976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	-46910711	True	NA	NA	False	NA	NA	NA	46917474	46827757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44141.nnic	chr18	+	904	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	0	318	0	-122	multi-exon	FALSE	canonical	3	53	junction_1	34.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	46863547	True	NA	24	True	NA	NA	NA	46868643	46875445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_44143.nnic	chr18	+	1024	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	0	198	0	-2	multi-exon	FALSE	canonical	3	53	junction_1	34.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	46863547	True	NA	NA	False	AATAAA	-15	NA	46868643	46875565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_44145.nnic	chr18	+	1036	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-16	122	-9	-122	multi-exon	FALSE	canonical	3	122	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	46863534	True	NA	24	True	NA	NA	NA	46868630	46875445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868991_46874769
transcript_44147.nnic	chr18	+	1156	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-16	2	-9	-2	multi-exon	FALSE	canonical	3	122	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	46863534	True	NA	NA	False	AATAAA	-15	NA	46868630	46875565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868991_46874769
transcript_44149.nnic	chr18	+	1869	2	FSM	ENSG00000289168.1	ENST00000687124.1	467	2	-3	-1399	0	1399	multi-exon	FALSE	canonical	3	53	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAACTC	46863547	True	NA	NA	False	NA	NA	NA	46868643	46870631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811
transcript_44151.nnic	chr18	+	1121	2	FSM	ENSG00000289168.1	ENST00000690991.1	1127	2	4	2	0	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	46863547	True	NA	NA	False	AATAAA	-15	NA	46868643	46875565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868969_46874769
transcript_44154.known	chr18	+	2893	16	FSM	ENSG00000167216.19	ENST00000356157.12	2893	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	12.3367562817604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	46946584	True	NA	NA	False	AATAAA	-16	NA	46946834	47102243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_44156.nic	chr18	+	1368	13	ISM	ENSG00000167216.19	ENST00000356157.12	2893	16	-38	24701	0	0	5prime_fragment	FALSE	canonical	2	22	junction_4	7.42555646998182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	46946546	True	NA	14	True	AATAAA	-22	NA	46946796	47077542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_44157.nic	chr18	+	1365	13	NIC	ENSG00000167216.19	novel	2893	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	9.08295106229247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	46946546	True	NA	14	True	AATAAA	-22	NA	46946796	47077542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_46946924_47046456_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_44170.known	chr18	-	2224	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	164.297156261317	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-47146237	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
transcript_44171.known	chr18	-	2185	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	182.945726621009	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	-47146237	True	NA	-9	True	AATAAA	-15	NA	47150500	47107409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
transcript_4418.nic	chr1	-	787	7	NIC	ENSG00000142856.17	novel	961	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	182.586965580788	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518922	True	NA	-10	True	AATAAA	-19	NA	63523257	63440769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
transcript_44183.known	chr18	-	788	4	FSM	ENSG00000167220.12	ENST00000587841.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	232.860950402214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTTCTCTGCTGTCTC	-47146213	True	NA	70	True	GGGGCT	-25	NA	47150476	47108377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47150377
transcript_44187.known	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	57.5	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-47168621	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47156233_47157435_47157538_47176186
transcript_44197.known	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_10	75.1039279931483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-47929825	True	NA	-92	True	AATAAA	-19	NA	47931141	47831550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_44206.known	chr18	-	10445	10	FSM	ENSG00000175387.16	ENST00000356825.8	10445	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	116.236455470076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	-47931128	False	NA	-23	True	ATTAAA	-30	NA	47931146	47833095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
transcript_44208.nic	chr18	-	1600	10	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	0	-272	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	95.9144423270739	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCAAATTACTGAGCT	-47927557	True	NA	-7	True	AATAAA	-24	NA	47930362	47845183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930251
transcript_44209.nic	chr18	-	1570	10	ISM	ENSG00000175387.16	ENST00000402690.6	12075	11	261	13633	-25	-272	5prime_fragment	FALSE	canonical	3	85	junction_9	78.4615971174575	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCAAATTACTGAGCT	-47928866	True	NA	-7	True	AATAAA	-24	NA	47930880	47845183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_44211.known	chr18	-	1714	9	FSM	ENSG00000175387.16	ENST00000591214.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	120.505640428156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAATAGAAAAATAAGGC	-47928828	True	NA	NA	False	NA	NA	NA	47930842	47844911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
transcript_44215.known	chr18	-	5049	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_11	17.1472255408856	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	49460802	49041473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_44222.nic	chr18	-	2854	15	ISM	ENSG00000141627.14	ENST00000269445.10	5049	17	88	76532	0	-20821	5prime_fragment	FALSE	canonical	3	140	junction_9	17.9751813024832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGCTGGGCACA	-49456647	True	NA	NA	False	AGTAAA	-32	NA	49460714	49118005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_44228.known	chr18	-	856	8	FSM	ENSG00000265681.8	ENST00000618613.5	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	6439.05065889026	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315662	True	NA	-21	True	AATAAA	-21	NA	49492409	49488480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492257
transcript_44229.known	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	6435.06843120458	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	-49315652	True	NA	-92	True	AAGAAA	-40	NA	49492399	49488551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
transcript_44234.known	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	6366.89601111299	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	-49315735	True	NA	7	True	ATTAAA	-39	NA	49492482	49488452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
transcript_44245.known	chr18	-	790	7	FSM	ENSG00000265681.8	ENST00000579248.5	790	7	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_6	4989.20085172855	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315697	True	NA	-24	True	AATAAA	-18	NA	49492444	49488483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492257
transcript_44246.known	chr18	-	684	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_6	4884.49852993006	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAGAAACTGAAGAAACA	-49315685	True	NA	-101	True	AAGAAA	-31	NA	49492432	49488560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
transcript_44257.known	chr18	-	576	7	FSM	ENSG00000265681.8	ENST00000583036.5	576	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_5	6863.16257072658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGAGCTCTCCCTGCCA	-49315761	True	NA	NA	False	NA	NA	NA	49492508	49489451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492457
transcript_44265.known	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	5775.55508674274	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	-49315736	True	NA	NA	False	AAAAAG	-1	NA	49492483	49489358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_44274.known	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	102.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	-49310487	False	176747	-1	True	AATAAA	-30	NA	49487234	49477242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49482411_49483583_49483772_49487042
transcript_44275.known	chr18	-	5395	3	FSM	ENSG00000177576.12	ENST00000613385.4	5395	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	149	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTATCTTGAGTTTT	-49310505	False	176747	-8	True	AATAAA	-23	NA	49487252	49477249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49482411_49483583_49483772_49487206
transcript_44278.known	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	8803	junction_6	2523.35183282519	37623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315718	True	NA	-21	True	AATAAA	-21	NA	49492465	49488480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
transcript_44279.known	chr18	-	1440	7	FSM	ENSG00000215472.10	ENST00000584895.5	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6920.04049642935	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATTCAGTTTAACTG	-49314839	False	NA	23	True	TATAAA	-42	NA	49491586	49481680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49482411_49483583_49483772_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_44280.known	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	10533	junction_1	1753.85844354669	2885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315093	False	NA	-24	True	AATAAA	-18	NA	49491840	49488483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_44281.known	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	5487.52845641824	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315732	True	NA	-24	True	AATAAA	-18	NA	49492479	49488483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
transcript_44282.known	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	5759.97620133972	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	-49315067	False	NA	-58	True	AGTAAA	-1	NA	49491814	49488517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
transcript_44283.known	chr18	+	1453	6	FSM	ENSG00000101670.12	ENST00000580036.5	1453	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	3.61109401705356	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGGCTATCAGTCCA	49561631	True	NA	NA	False	AATAAA	-18	NA	49562086	49581852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414
transcript_44290.known	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_9	123.546662349809	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-49808002	False	5531	1	True	AATAAA	-19	NA	49813533	49782163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
transcript_44291.nic	chr18	-	1794	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	294.48335172713	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	-49808422	True	NA	-10	True	AATAAA	-18	NA	49813953	49783502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813681
transcript_44292.nic	chr18	-	1749	10	NIC	ENSG00000167315.18	novel	1840	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	308.24845678626	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	NA	False	NA	-10	True	AATAAA	-18	NA	49813958	49783502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_44294.known	chr18	-	1657	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	266.160770128799	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-49808422	True	NA	-12	True	AATAAA	-16	NA	49813953	49783504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
transcript_4430.known	chr1	+	2178	14	FSM	ENSG00000203965.13	ENST00000371088.5	2178	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_7	10.8954145938371	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTGTTCTTATTTA	63523099	True	NA	7	True	ATTAAA	-19	NA	63523524	63572693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63545915_63546058_63551724_63551835_63555357_63555516_63557113_63557248_63561708_63561858_63568309_63568520_63571020_63571129_63572441
transcript_44309.known	chr18	+	421	1	FSM	ENSG00000267322.3	ENST00000615535.1	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCAGGAGGCGGCCGC	49768605	True	NA	16	True	NA	NA	NA	49814022	49814443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_49814000_49814400
transcript_4431.known	chr1	+	2337	11	FSM	ENSG00000079739.17	ENST00000371084.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	2	359	junction_3	114.307523811865	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGTCGTCTTTTTTTC	63586256	True	NA	NA	False	AATAAA	-17	NA	63593410	63660245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
transcript_44310.known	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	31.4759332665451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	-50281456	False	7686	-28	True	AATAAA	-11	NA	50281466	50271049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44316.known	chr18	-	4905	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	45.368809648137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281759	False	7686	-3	True	TTTAAA	-31	NA	50281769	50268845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44322.known	chr18	-	385	2	FSM	ENSG00000141644.18	ENST00000589758.1	385	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACCTACTTAATAAA	-50281465	False	7686	NA	False	TTTAAA	-44	NA	50281475	50279745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50280018_50281362
transcript_44323.known	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	82.8145210573555	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50279965	True	NA	-15	True	AATAAA	-17	NA	50287651	50282346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44324.known	chr18	-	2280	15	FSM	ENSG00000154832.16	ENST00000412036.6	2280	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	80.8142554104845	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTCCACATTGCTGCG	-50279950	True	NA	-11	True	AATAAA	-21	NA	50287636	50282342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284719_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44326.known	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_9	38.3762921074766	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50280006	True	NA	-15	True	AATAAA	-17	NA	50287692	50282346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44334.known	chr18	-	2423	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	82.079193970459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGAAGAAACCAAGGA	NA	False	NA	-32	True	NA	NA	NA	50287839	50282363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44335.nic	chr18	-	2418	14	NIC	ENSG00000154832.16	novel	2320	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	235	junction_9	32.6529174462479	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50280027	True	NA	-15	True	AATAAA	-17	NA	50287713	50282346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_4435.known	chr1	+	2423	12	FSM	ENSG00000079739.17	ENST00000650546.1	2423	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	265.876874505276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTTTGGGATAATAAA	63586256	True	NA	NA	False	NA	NA	NA	63593410	63660209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63654989_63655112_63659585
transcript_44352.nnic	chr18	+	2533	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.0170035902535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50375000	50394168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_44353.known	chr18	+	979	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	28.487814158962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTGTGAACTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	50375039	50392247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_44354.known	chr18	+	2849	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	20.0783188760635	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	50374224	True	NA	14	True	AATAAA	-14	NA	50375045	50394168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_44357.known	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	24.2224872564501	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	50873937	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_4436.known	chr1	+	2305	7	FSM	ENSG00000185483.13	ENST00000371080.5	2305	7	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	188.328982250623	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTGAAACCTGGAGTT	63763935	True	NA	NA	False	AAAAAG	-19	NA	63774021	64143385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63774509_64009304_64009377_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404
transcript_44364.known	chr18	+	2211	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	6.16441400296898	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTAAAACATGCTCC	50967415	True	NA	5	True	AATAAA	-18	NA	50968039	50988121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
transcript_44365.known	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.4821855949366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	50967366	True	NA	NA	False	NA	NA	NA	50967990	50986946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
transcript_44366.known	chr18	+	1505	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAGTTGAGTAGTGAG	50967420	True	NA	NA	False	AATAAA	-17	NA	50968044	50969866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50968115_50968431
transcript_44367.known	chr18	-	129	1	FSM	ENSG00000207233.1	ENST00000384504.1	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTCTGATTAAAAAAAAAG	-54222387	False	NA	NA	False	NA	NA	NA	54222412	54222283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_54222300_54222400
transcript_44371.known	chr18	+	6020	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	40.4340646021015	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	54265321	True	NA	9	True	AATAAA	-14	NA	54269516	54298234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_44376.known	chr18	+	2030	9	FSM	ENSG00000101751.11	ENST00000406285.7	2030	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	119.534513844329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTGAAAAGCAAGGGAAT	54265323	True	NA	NA	False	CATAAA	-20	NA	54269518	54294483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_44378.nic	chr18	+	2363	9	NIC	ENSG00000101751.11	novel	2705	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	111.982141433355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	54265342	True	NA	16	True	AATAAA	-18	NA	54269537	54294724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_54269662_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_4438.known	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	439.731281580012	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147463	False	NA	39	True	AATAAA	-27	NA	65147548	65232145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_44384.known	chr18	+	1204	6	FSM	ENSG00000101751.11	ENST00000583136.5	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	126.724898895205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATTTTAGAAAAAGAA	54265389	True	NA	NA	False	NA	NA	NA	54269584	54282911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
transcript_44385.known	chr18	-	1683	1	FSM	ENSG00000277324.1	ENST00000621167.1	1683	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATATGATTCTACTT	-54269915	True	NA	NA	False	TATAAA	-26	NA	54270028	54268345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_54268300_54270000
transcript_44389.known	chr18	-	8041	20	FSM	ENSG00000196628.20	ENST00000354452.8	8041	20	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	22.3526260022548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTTCATTTTCAAA	-55582620	True	NA	NA	False	ATTAAA	-17	NA	55588192	55222184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_44390.known	chr18	-	3789	20	FSM	ENSG00000196628.20	ENST00000629387.2	3789	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	38.6836734656597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACAAGTAAAGTT	-55588783	True	NA	22	True	AATACA	-29	NA	55589807	55226792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_44391.known	chr18	-	8317	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	30.5408313945686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTTTTAGTATTATA	-55587605	False	NA	-3	True	TATAAA	-14	NA	55588629	55222333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_44392.known	chr18	-	2767	19	FSM	ENSG00000196628.20	ENST00000537578.5	2767	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	42.2998190463981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTGAACGGCAATCTT	NA	False	NA	NA	False	NA	NA	NA	55589836	55227751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_44393.known	chr18	-	2628	19	FSM	ENSG00000196628.20	ENST00000568740.5	2628	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	56.6069674636621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAAGTGC	-55588782	True	NA	23	True	AAAACA	-11	NA	55589806	55227845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351001_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_44395.nnic	chr18	+	818	3	Fusion	ENSG00000267327.2_ENSG00000267057.6	novel	518	3	NA	NA	-65	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCATATGCACAACTTA	55892295	True	NA	5	True	AATAAA	-20	NA	55892972	56096310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr18_+_55893443_55917204_55917317_56096074
transcript_44397.nnic	chr18	+	812	3	Fusion	ENSG00000267327.2_ENSG00000267057.6	novel	620	4	NA	NA	-69	0	multi-exon	TRUE	canonical	2	5	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGCACAACTTATTTA	55892291	True	NA	9	True	AATAAA	-24	NA	55892968	56096314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr18_+_55893443_56050079_56050178_56096074
transcript_44401.known	chr18	-	1339	10	FSM	ENSG00000091164.13	ENST00000590954.5	1339	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	383.348115657007	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTTTCTAAATCAG	-56651066	True	NA	-1	True	AATAAA	-25	NA	56651128	56602821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342_56638506_56647448_56647536_56651016
transcript_44406.known	chr18	-	6840	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_4	81.3611249495803	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTGTATTTTGT	-56628602	True	NA	NA	False	ATTAAA	-16	NA	56638592	56597208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
transcript_44411.nnic	chr18	-	2732	5	NNC	ENSG00000258609.3	novel	2604	4	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	17.7816619020833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	-57071525	True	NA	-1	True	AATAAA	-15	NA	57072158	57054557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_57056242_57056588_57056687_57057499_57058001_57069809_57070004_57071903
transcript_44412.known	chr18	-	2604	4	FSM	ENSG00000258609.3	ENST00000553704.3	2604	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.7371617907833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	-57071486	True	NA	-1	True	AATAAA	-15	NA	57072119	57054557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_57056251_57057499_57058001_57069809_57070004_57071903
transcript_44413.known	chr18	-	7689	11	FSM	ENSG00000066926.13	ENST00000262093.11	7689	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	12.4755761390006	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATATGCATAGACTGTT	-57583890	True	NA	NA	False	AGTAAA	-29	NA	57586702	57544376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586553
transcript_44415.known	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_13	126.674722052589	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-57593581	True	NA	-30	True	AATAAA	-20	NA	57621836	57600655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
transcript_44416.known	chr18	+	1954	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	7	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTAAGGCTAAAACTCA	57629458	True	NA	NA	False	AATAAA	-44	NA	57630349	57669296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_57630519_57641558_57642053_57668005
transcript_44418.nnic	chr18	+	1019	7	NNC	ENSG00000166562.9	novel	791	6	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	372.909916140018	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59139722	False	NA	15	True	AATAAA	-16	NA	59139822	59158832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_59140036_59148064_59148232_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_44421.known	chr18	+	727	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	324.297024346509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131194	True	NA	15	True	AATAAA	-16	NA	59139874	59158832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
transcript_44422.known	chr18	+	791	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.2161255371915	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131203	True	NA	15	True	AATAAA	-16	NA	59139883	59158832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_44426.known	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	327.070615464	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131218	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
transcript_44429.known	chr18	+	2054	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.1872140511882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTATTCTTTTTGTAC	59131185	True	NA	NA	False	AATAAA	-17	NA	59139865	59157311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
transcript_4443.known	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	468.754775975669	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147722	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_44430.known	chr18	+	1088	3	FSM	ENSG00000166562.9	ENST00000585864.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCATTTACCTTTATG	59131203	True	NA	NA	False	AGTAAA	-23	NA	59139883	59153361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535
transcript_44434.known	chr18	-	4824	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	0	0	0	multi-exon	TRUE	canonical	3	473	junction_5	60.936898145176	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTCCTTCATTGA	-59349716	True	NA	74	True	AATAAA	-17	NA	59359265	59327822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_44444.known	chr18	-	6271	11	FSM	ENSG00000183287.14	ENST00000439986.9	6271	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	6.48382603097893	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTCTACTGTGTTTTG	-59697115	True	NA	-2	True	NA	NA	NA	59697423	59430938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_59436142_59438110_59438147_59439542_59439579_59439676_59439817_59447982_59448104_59454850_59454952_59466738_59466892_59469472_59469608_59480185_59480239_59696628_59696710_59697211
transcript_44447.known	chr18	+	1262	3	FSM	ENSG00000141682.12	ENST00000269518.9	1262	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAGTTAATTTTT	59875653	True	NA	-7	True	AATAAA	-39	NA	59900015	59903537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59900236_59900427_59900579_59902646
transcript_44448.known	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	0	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	59875633	True	NA	25	True	ATTAAA	-14	NA	59899995	59904305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59900236_59902646
transcript_44450.known	chr18	-	653	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACTGCTTATTTCC	-61606779	True	NA	2	True	AATAAA	-18	NA	61606916	61606067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_61606655_61606850
transcript_44451.known	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_28	15.1195912913123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-62183487	True	NA	NA	False	NA	NA	NA	62187056	62042851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_44452.known	chr18	-	2367	15	FSM	ENSG00000197563.11	ENST00000638329.1	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	41.9139667920479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTAAAAAAATCTCT	-62183480	True	NA	NA	False	NA	NA	NA	62187049	62112564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_44455.known	chr18	-	5143	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	13.4421485642992	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTATCTAGAAGTTTG	-63364037	True	NA	-4	True	AATAAA	-29	NA	63367206	63327725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_44457.known	chr18	-	1024	9	FSM	ENSG00000119537.18	ENST00000326575.9	1024	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.9685769540853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGGCTGCAAGCAAG	-63364035	True	NA	NA	False	NA	NA	NA	63367204	63331650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_44458.known	chr18	+	785	2	FSM	ENSG00000267390.2	ENST00000589905.2	820	2	33	2	33	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGTGGTTTATTAT	63367286	True	NA	NA	False	AATAAA	-21	NA	63367327	63381629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_63367860_63381376
transcript_44459.known	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_5	21.2953046467995	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-63417468	True	NA	0	True	ATTAAA	-23	NA	63422476	63389189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_44462.known	chr18	+	2586	7	FSM	ENSG00000206075.14	ENST00000382771.9	2586	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.5723301886761	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTTTTTTTTTTCCT	63476918	True	NA	NA	False	AATAAA	-17	NA	63476957	63505085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_63477046_63484421_63484597_63486945_63487084_63489346_63489465_63492952_63493096_63499119_63499288_63503329
transcript_44463.known	chr18	-	1707	8	FSM	ENSG00000206073.11	ENST00000341074.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.98976975388345	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTTACCTGTTTTC	-63644183	True	NA	NA	False	AATAAA	-18	NA	63644256	63637258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63638124_63639184_63639341_63639633_63639777_63640873_63640992_63641759_63641889_63643160_63643218_63643412_63643604_63644208
transcript_44464.known	chr18	-	1707	8	FSM	ENSG00000057149.16	ENST00000283752.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.97948663722157	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTTACATTTTCTC	-63661837	True	NA	NA	False	AATAAA	-18	NA	63661893	63655196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63656062_63656830_63656987_63657269_63657413_63658512_63658631_63659398_63659528_63660799_63660857_63661051_63661243_63661845
transcript_44468.known	chr18	+	2102	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.05536398239638	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	63948856	True	NA	16	True	AATAAA	-16	NA	63949300	63961835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
transcript_44470.nic	chr18	+	447	3	ISM	ENSG00000221887.6	ENST00000481726.1	682	6	-95	21459	-39	115	5prime_fragment	FALSE	canonical	3	30	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATAGTCAGTTCTT	63948817	True	NA	-92	True	AATATA	-30	NA	63949261	63960315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_63949401_63954407_63954558_63960157
transcript_44471.nic	chr18	+	544	3	ISM	ENSG00000221887.6	ENST00000481726.1	682	6	-95	21362	-39	212	5prime_fragment	FALSE	canonical	3	30	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCCAACTCGTAGACCT	63948817	True	NA	5	True	ATTAAA	-16	NA	63949261	63960412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_63949401_63954407_63954558_63960157
transcript_44474.known	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_7	17.3789144271634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-68712762	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_44476.known	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	18.2029376413674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	-68712712	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_44479.nic	chr18	+	345	3	NIC	ENSG00000150636.17	novel	597	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	1	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	68714998	True	NA	NA	False	AATAAA	-15	NA	68715210	68718130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_68715362_68716527_68716595_68718003
transcript_44481.nic	chr18	+	716	2	ISM	ENSG00000150636.17	ENST00000580292.2	1859	4	-102	37913	2	-1038	5prime_fragment	FALSE	canonical	2	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGATGTGGTGGC	68714998	True	NA	NA	False	NA	NA	NA	68715210	68717092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_68715362_68716527
transcript_44482.nnic	chr18	+	490	3	NIC	ENSG00000263958.3	novel	2957	2	NA	NA	-59	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	72868229	True	NA	4	True	AATAAA	-16	NA	72868328	72881397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_72868463_72880086_72880235_72881189
transcript_44483.known	chr18	+	457	3	FSM	ENSG00000263958.3	ENST00000578967.2	562	3	103	2	59	-1	multi-exon	FALSE	canonical	2	6	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	72868833	False	NA	4	True	AATAAA	-16	NA	72869039	72881397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_72869141_72880086_72880235_72881189
transcript_44484.known	chr18	+	285	2	FSM	ENSG00000263958.3	ENST00000580564.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTCTGTTTTATTTTG	72868288	False	NA	6	True	AATAAA	-18	NA	72868387	72881399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_72868463_72881189
transcript_44485.known	chr18	-	1675	10	FSM	ENSG00000141665.13	ENST00000419743.7	1675	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.00616334280753	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGCAATGCCTTTCA	-74147694	True	NA	-31	True	AATAAA	-14	NA	74147834	74073367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74073731_74081926_74082052_74123367_74123511_74124488_74124572_74125974_74126102_74129404_74129615_74130415_74130659_74135761_74135867_74140201_74140313_74147669
transcript_44487.known	chr18	+	3084	6	FSM	ENSG00000075336.12	ENST00000169551.11	3084	6	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	22.4	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTGTGGTGTCTCTG	74142561	True	NA	NA	False	ACTAAA	-39	NA	74148522	74160531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74149110_74155144_74155208_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_44492.nnic	chr18	+	1381	6	NNC	ENSG00000075336.12	novel	3084	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	193.169976963295	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTATTCATTTTATAT	74148482	False	NA	3	True	AATAAA	-15	NA	74148497	74158786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_74149110_74155144_74155225_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_44512.known	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	1017.03171042008	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	-74276595	False	NA	-9	True	AATATA	-17	NA	74291041	74253295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
transcript_44513.known	chr18	-	776	6	FSM	ENSG00000166347.19	ENST00000494131.6	776	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	1186.92537254875	1838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	-74277489	True	NA	-10	True	AATATA	-16	NA	74291935	74253296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74255776_74256829_74256854_74260914_74260945_74263348_74263478_74291746
transcript_44514.known	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	2345	junction_2	44.4325331260778	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-74277517	True	NA	-6	True	AATAAA	-18	NA	74291963	74250845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
transcript_44518.known	chr18	+	4975	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	0	0	0	0	multi-exon	FALSE	canonical	1	454	junction_9	311.175005901053	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	74478108	True	NA	NA	False	AATAAA	-24	NA	74496362	74523454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_44519.known	chr18	+	2653	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	0	0	0	0	multi-exon	TRUE	canonical	1	338	junction_1	416.920389967015	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	74478052	True	NA	21	True	AATAAA	-30	NA	74496306	74521131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_4452.nnic	chr1	+	1469	5	NIC	ENSG00000162433.15	novel	6887	6	NA	NA	27	138	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	533.917830756756	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGTCTTGGGAACC	65143028	True	NA	52	True	NA	NA	NA	65147575	65227029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_65147666_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_44540.nic	chr18	+	871	6	NIC	ENSG00000133313.15	novel	4975	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	563.041881213112	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	74478051	True	NA	18	True	AATAAA	-19	NA	74496305	74509335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74509138
transcript_44542.nic	chr18	+	805	6	NIC	ENSG00000133313.15	novel	743	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	641.516453413317	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	74478062	True	NA	18	True	AATAAA	-19	NA	74496316	74509335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74509138
transcript_44546.known	chr18	+	586	2	FSM	ENSG00000133313.15	ENST00000580229.1	586	2	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTGACTGGATGAGT	74478107	True	NA	NA	False	NA	NA	NA	74496361	74498024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74496432_74497508
transcript_44547.known	chr18	+	536	4	FSM	ENSG00000133313.15	ENST00000577355.2	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	674.0385745638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	74501245	True	NA	18	True	AATAAA	-19	NA	74501385	74509335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74501473_74505848_74506012_74508839_74508929_74509138
transcript_44548.known	chr18	-	2418	2	FSM	ENSG00000264247.2	ENST00000652782.1	2418	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTTGTGTTAACTAG	-74597509	True	NA	NA	False	AATAAA	-21	NA	74597833	74592827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74593840_74596427
transcript_44550.known	chr18	-	7518	2	FSM	ENSG00000180011.7	ENST00000322342.4	7518	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATGTGTAGAGCGT	-75208994	False	NA	NA	False	AATAAA	-15	NA	75209139	75195112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_75202341_75208849
transcript_44551.known	chr18	+	631	3	FSM	ENSG00000265778.4	ENST00000657360.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGCGCAGAGTTTGC	76491496	True	NA	NA	False	AAAACA	-22	NA	76491628	76493168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_76491690_76492175_76492334_76492756
transcript_44553.nnic	chr18	+	1161	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-113	-110810	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTGGCTTTAT	77421064	True	NA	NA	False	TTTAAA	-20	NA	77421505	77450234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_77422025_77449592
transcript_44554.nnic	chr18	+	1504	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-16	-110370	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTTGGACATCCAAT	77421161	True	NA	NA	False	AATAAA	-24	NA	77421602	77450674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_77422025_77449592
transcript_44555.known	chr18	-	471	2	FSM	ENSG00000263146.3	ENST00000572007.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGCACGCTGCTTTCG	-78977872	False	NA	NA	False	NA	NA	NA	78977883	78977287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_78977430_78977554
transcript_44556.known	chr18	-	1256	2	FSM	ENSG00000263146.3	ENST00000575722.1	1256	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTGCAATGTTGTT	NA	False	NA	0	True	ATTAAA	-19	NA	78978843	78976554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_78977430_78978462
transcript_44557.known	chr18	-	2072	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTAAAGTTTTCCT	NA	False	NA	-2	True	ATTAAA	-14	NA	79679358	79677286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79677300_79679400
transcript_44558.known	chr18	+	2671	2	FSM	ENSG00000060069.18	ENST00000590599.2	2671	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCTTCTCGTGGGTG	79734679	False	NA	17	True	AATAAA	-13	NA	79734700	79754501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_79736522_79753651
transcript_44559.nic	chr18	-	886	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	81	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_2	579.940226805027	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCGTTTTGCATACT	-79988405	False	29471	-7	True	AGTAAA	-22	NA	79988421	79973405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_44560.nic	chr18	-	779	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_2	579.940226805027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	-79988405	False	29471	-11	True	AATAAA	-20	NA	79988421	79973512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_44561.known	chr18	-	3472	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_2	108	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTAAGTTTATTGTAT	-79959092	True	NA	-18	True	GATAAA	-15	NA	79988563	79970812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79977597_79977702_79988239
transcript_44562.known	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-80033764	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79977597_79977702_80033850
transcript_44566.known	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	-79959070	True	NA	-8	True	AGTAAA	-21	NA	79988541	79973406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79988239
transcript_44568.nnic	chr18	-	467	2	NIC	ENSG00000141759.15	novel	546	4	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	48	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	-80033788	True	NA	-11	True	AATAAA	-20	NA	80033973	79973512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_79973857_80033850
transcript_44571.known	chr18	+	5590	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	10.9239797387826	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATACTTTCTTTTT	80031290	True	NA	5	True	AATAAA	-22	NA	80034433	80050651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
transcript_44572.known	chr18	+	1219	6	FSM	ENSG00000101546.13	ENST00000262197.7	1219	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	73.6016304167238	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	80031322	True	NA	23	True	ATTAAA	-36	NA	80034465	80046397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80044211_80044286_80045773
transcript_44577.known	chr18	+	662	1	FSM	ENSG00000278000.1	ENST00000616901.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCCAGCTGTGACCA	NA	False	NA	14	True	AATAAA	-24	NA	80161751	80162413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_80161800_80162400
transcript_44578.known	chr18	+	1058	2	FSM	ENSG00000267270.7	ENST00000588226.6	1195	2	137	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTATTGCCCTCTCCCTCC	80147895	True	NA	27	True	ATTAAA	-31	NA	80148048	80149273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_80148255_80148421
transcript_44579.known	chr19	-	398	3	FSM	ENSG00000282458.1	ENST00000632089.1	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	-68430	True	NA	NA	False	TATAAA	-16	NA	70945	65821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_66048_66345_66500_70927
transcript_44583.known	chr19	-	850	6	FSM	ENSG00000141934.10	ENST00000633125.1	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	317.850908446083	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGTCACTGACGTT	-287497	True	NA	NA	False	NA	NA	NA	291398	281462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291288
transcript_44584.known	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	309.872877160942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-287492	True	NA	-23	True	AGTAAA	-22	NA	291393	281042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
transcript_44585.nic	chr19	-	1295	6	NIC	ENSG00000141934.10	novel	1279	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	319.446646562458	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-287500	True	NA	-23	True	AGTAAA	-22	NA	291401	281042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288190_291284
transcript_44593.known	chr19	+	1795	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	2649.90713737948	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	NA	False	NA	25	True	AATAAA	-24	NA	571276	583493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_44598.known	chr19	+	1329	6	FSM	ENSG00000172270.22	ENST00000618006.4	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3053.04853548056	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	449008	True	NA	19	True	AATAAA	-18	NA	572618	583487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_572702_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_446.nic	chr1	-	961	7	ISM	ENSG00000248333.9	ENST00000407249.7	2677	20	-95	6799	-95	-614	5prime_fragment	FALSE	canonical	3	85	junction_3	10.2794292967395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-1659089	False	NA	NA	False	NA	NA	NA	1659107	1642385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_44602.known	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	32	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-571294	True	NA	-3	True	NA	NA	NA	571734	567310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_567625_571439_571597_571696
transcript_44607.known	chr19	-	721	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	12	0	8	0	multi-exon	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	-571305	True	NA	5	True	NA	NA	NA	571745	567209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_567625_571439
transcript_44608.known	chr19	-	625	3	FSM	ENSG00000267751.6	ENST00000588908.6	1041	3	18	398	-8	-11	multi-exon	FALSE	canonical	1	2	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGACGTCATGAATTAA	-571296	True	NA	-6	True	NA	NA	NA	571736	567220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_567649_571439_571597_571696
transcript_44609.known	chr19	+	1575	8	FSM	ENSG00000172270.22	ENST00000680326.1	1575	8	0	0	0	0	multi-exon	FALSE	canonical	1	290	junction_1	2577.61547772751	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	448999	True	NA	25	True	AATAAA	-24	NA	572609	583493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_572702_579508_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_44611.known	chr19	-	469	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	18.5711843695788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	-617967	False	NA	-38	True	AATAAA	-19	NA	617997	617223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_617324_617418_617481_617569_617656_617776
transcript_44612.known	chr19	-	3771	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	0	0	0	multi-exon	TRUE	canonical	3	641	junction_6	84.7132073528089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	-621965	True	NA	-35	True	AATAAA	-22	NA	633537	617220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_44613.known	chr19	-	963	9	FSM	ENSG00000070423.18	ENST00000589762.5	963	9	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_5	245.18229824969	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCACGTCGGCCGTC	-658061	True	NA	NA	False	NA	NA	NA	663233	648131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651691_651856_652232_652297_652825_652885_663046
transcript_44614.known	chr19	+	2144	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	9	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	680634	False	NA	8	True	AATAAA	-15	NA	680706	683392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_680880_681332_681561_681649
transcript_44616.known	chr19	+	748	3	FSM	ENSG00000070404.10	ENST00000605925.3	748	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCTCTAGTCTGGGT	680510	True	NA	NA	False	NA	NA	NA	680750	682107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_680813_681332_681561_681649
transcript_44617.known	chr19	+	746	3	FSM	ENSG00000070404.10	ENST00000588773.5	746	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCTCTAGTCTGGGT	680474	True	NA	NA	False	NA	NA	NA	680714	682107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_680775_681332_681561_681649
transcript_44619.known	chr19	+	1023	2	FSM	ENSG00000267530.4	ENST00000606242.3	1045	2	0	22	0	-22	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACCACTTGTTACCTC	782461	True	NA	NA	False	NA	NA	NA	782762	785269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_783331_784814
transcript_44620.known	chr19	+	1191	5	FSM	ENSG00000197766.8	ENST00000327726.11	1191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5841423566947	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGTAATCCCAGCACTT	NA	False	NA	NA	False	NA	NA	NA	859663	863641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_859745_860616_860774_860860_861006_861698_861957_863091
transcript_44622.known	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	287	junction_5	65.1152823843988	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-885233	True	NA	NA	False	NA	NA	NA	893218	867629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_44623.known	chr19	-	2004	10	FSM	ENSG00000175221.16	ENST00000607471.5	2004	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	142.598720407051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-877924	False	NA	-15	True	AATAAA	-16	NA	885909	867962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_868500_868862_868947_871036_871254_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769
transcript_44624.known	chr19	+	107	1	FSM	ENSG00000207507.1	ENST00000384776.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCCATTTTCCC	893412	True	NA	NA	False	NA	NA	NA	893483	893590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_893500_893600
transcript_44627.known	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_7	51.5664817572067	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-906692	True	NA	-7	True	AATAAA	-17	NA	913219	896502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
transcript_44628.known	chr19	+	1521	10	FSM	ENSG00000065268.11	ENST00000585809.6	1521	10	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_7	87.0708523751395	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	974992	True	NA	19	True	NA	NA	NA	984344	994557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
transcript_4463.known	chr1	+	928	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	476.860238958964	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTCAAATGGTGTGTAA	65146967	True	NA	NA	False	AAGAAA	-14	NA	65149001	65226439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_44633.known	chr19	+	1492	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	1192.54599877056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTTCCCCCAGGGG	976413	True	NA	NA	False	AAGAAA	-3	NA	1026630	1038309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
transcript_44637.known	chr19	+	2109	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	909.023545105161	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976400	True	NA	31	True	AATAAA	-23	NA	1026617	1039068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
transcript_44639.known	chr19	+	2194	7	FSM	ENSG00000064666.15	ENST00000562958.6	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	978.693800713765	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976411	True	NA	31	True	AATAAA	-23	NA	1026628	1039068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036066_1036247_1036415_1036563_1037624
transcript_44642.known	chr19	+	2149	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	0	0	0	0	multi-exon	FALSE	canonical	3	2356	junction_6	139.610967413818	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	976390	True	NA	28	True	AATAAA	-20	NA	1026607	1039065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
transcript_44644.known	chr19	+	2033	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	984.345752263908	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976392	True	NA	31	True	AATAAA	-23	NA	1026609	1039068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
transcript_44645.known	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_12	22.0315978618852	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	1038589	True	NA	20	True	AATAAA	-33	NA	1040106	1065572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
transcript_44649.known	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3087	junction_2	289.115611364544	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-1056039	True	NA	-23	True	AATAAA	-22	NA	1095375	1086573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_44650.known	chr19	-	1286	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1229.790043471	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCGACTAACAAGGTTT	-1056038	True	NA	NA	False	AATAAA	-19	NA	1095374	1088162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_44651.known	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_1	1205.96107833088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-1056044	True	NA	NA	False	NA	NA	NA	1095380	1087644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_44653.known	chr19	-	1105	7	FSM	ENSG00000099817.12	ENST00000589737.5	1105	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	1196.68422689066	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	-1056039	True	NA	NA	False	AATAAA	-34	NA	1095375	1088147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
transcript_4466.known	chr1	+	867	5	FSM	ENSG00000162433.15	ENST00000479060.1	867	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	552.442078411846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGTGTGGATTTCAAA	65165882	True	NA	NA	False	AAGAAA	-4	NA	65165931	65226429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65166020_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_44661.known	chr19	+	940	4	FSM	ENSG00000180448.11	ENST00000586378.5	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	21.0607586652417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTGTGAGCTGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	1082783	1085996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1083067_1083142_1083354_1084237_1084347_1085659
transcript_44663.known	chr19	+	1563	3	FSM	ENSG00000180448.11	ENST00000592297.2	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	NA	False	NA	-14	True	NA	NA	NA	1082840	1086600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1083354_1084237_1084347_1085659
transcript_44664.known	chr19	-	1096	8	FSM	ENSG00000099817.12	ENST00000586746.5	1096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1230.21133077506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACGGTGGCTTCCGAGA	-1056018	True	NA	-28	True	AATAAA	-17	NA	1095354	1086578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1086989_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_44672.known	chr19	+	1002	8	NNC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1533.60415827739	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	1102522	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_1104930_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_44685.known	chr19	+	803	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	1272.86317672665	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	1073176	True	NA	22	True	AATAAA	-22	NA	1104072	1106788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
transcript_44687.known	chr19	+	793	7	FSM	ENSG00000167468.19	ENST00000611653.4	793	7	0	0	0	0	multi-exon	FALSE	canonical	3	3170	junction_1	180.753054377144	2979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073155	True	NA	13	True	AATAAA	-13	NA	1104051	1106779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_44706.known	chr19	+	812	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1392.03930978978	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073111	True	NA	13	True	AATAAA	-13	NA	1104007	1106779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
transcript_4471.nnic	chr1	+	2205	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	29	-1742	29	1742	multi-exon	FALSE	canonical	3	23	junction_2	103	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTTTAAAATTTTTT	65417612	True	NA	6	True	AATAAA	-21	NA	65420615	65433806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_44714.nnic	chr19	+	275	2	NIC	ENSG00000267778.1	novel	844	3	NA	NA	-70	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGTACCTGTACTAAA	1238044	False	NA	NA	False	AATAAA	-22	NA	1238108	1239520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_1238227_1239363
transcript_44715.known	chr19	+	704	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_4	330.846924573888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222552	True	NA	28	True	ATTAAA	-16	NA	1241745	1244825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
transcript_44716.known	chr19	+	1144	4	FSM	ENSG00000099624.8	ENST00000590265.5	1144	4	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	346.058119717226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222576	True	NA	28	True	ATTAAA	-16	NA	1241769	1244825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1242610_1244096_1244186_1244314_1244441_1244736
transcript_44717.known	chr19	+	343	3	FSM	ENSG00000099624.8	ENST00000614837.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_2	363.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1244037	False	NA	28	True	ATTAAA	-16	NA	1244057	1244825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1244186_1244314_1244441_1244736
transcript_44722.known	chr19	+	1052	9	FSM	ENSG00000099622.14	ENST00000585914.5	1052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	474.444411917771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGATTCGAATAAAGGGCC	1262495	True	NA	-20	True	NA	NA	NA	1269351	1274773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1273493_1273716_1274306_1274445_1274648
transcript_4473.known	chr1	+	4541	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	22.647050335284	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	65417664	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
transcript_44741.known	chr19	+	938	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	333.559773427462	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCGCACGAGTAGGACC	1262490	True	NA	87	True	AAGAAA	-17	NA	1269346	1274880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_44747.nic	chr19	+	946	8	NIC	ENSG00000099622.14	novel	938	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_1	407.327877759429	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262473	True	NA	17	True	AATAAA	-23	NA	1269329	1274810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_44749.known	chr19	+	1303	7	FSM	ENSG00000099622.14	ENST00000586472.5	1303	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	369.221553481857	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1266593	True	NA	NA	False	ATTAAA	-18	NA	1266652	1273172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1266702_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_44754.known	chr19	+	1328	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_6	94.1855438306042	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1262480	True	NA	NA	False	ATTAAA	-18	NA	1269336	1273172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_44755.known	chr19	+	1073	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	291.282795006273	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262493	True	NA	17	True	AATAAA	-23	NA	1269349	1274810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_4476.known	chr1	+	377	3	FSM	ENSG00000213625.9	ENST00000497874.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	103.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATTTGTTTATG	65417664	True	NA	NA	False	AATAAA	-18	NA	65420667	65428009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65427781
transcript_44763.known	chr19	+	830	7	FSM	ENSG00000099622.14	ENST00000591376.5	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	405.126077769488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCGCACGAGTAGGACC	1262491	True	NA	87	True	AAGAAA	-17	NA	1269347	1274880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_44765.known	chr19	+	870	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	344.407421845439	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	1269225	False	NA	55	True	NA	NA	NA	1269265	1272582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_44766.known	chr19	+	942	7	FSM	ENSG00000099622.14	ENST00000586773.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	410.667613635272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCGCCTGGAGCCCG	1269286	False	NA	NA	False	NA	NA	NA	1269326	1274595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_44768.known	chr19	+	1606	6	FSM	ENSG00000099622.14	ENST00000413636.6	1606	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	400.479912105464	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1262475	True	NA	NA	False	ATTAAA	-18	NA	1269331	1273172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271366_1271550_1271633_1271980
transcript_44769.known	chr19	+	3346	6	FSM	ENSG00000099622.14	ENST00000587896.6	3346	6	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_1	40.7303326772566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262475	True	NA	17	True	AATAAA	-23	NA	1269331	1274810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_4477.known	chr1	+	492	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGGAGATGAGTTTTA	65417583	True	NA	NA	False	AAGAAA	-8	NA	65420586	65432064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_44773.known	chr19	+	796	6	FSM	ENSG00000099622.14	ENST00000593128.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_5	97.3952770928858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCATTTCGGTTCTGA	1262474	True	NA	25	True	AGTAAA	-25	NA	1269330	1272552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271468_1271550_1271633_1271980_1272052_1272426
transcript_44774.known	chr19	+	650	6	FSM	ENSG00000099622.14	ENST00000593048.5	650	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	358.834223562915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCGGGATGGCCTCGTT	1262479	True	NA	73	True	NA	NA	NA	1269335	1272600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_44776.known	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	376.4781002927	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1269225	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_44780.known	chr19	+	3028	6	FSM	ENSG00000099622.14	ENST00000587169.5	3028	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	403.349277921754	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262478	True	NA	17	True	AATAAA	-23	NA	1269334	1274810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1274441_1274648
transcript_44782.known	chr19	+	769	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGCAAGATGCAACAT	1261527	False	NA	NA	False	NA	NA	NA	1261820	1264698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1262144_1264252
transcript_44783.known	chr19	-	1356	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCCTAGTTATTAAG	-1270030	False	NA	-3	True	NA	NA	NA	1270260	1267470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1268391_1269824
transcript_44784.known	chr19	+	1087	3	FSM	ENSG00000099622.14	ENST00000588917.2	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1272897	False	NA	17	True	AATAAA	-23	NA	1272924	1274810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1273716_1274306_1274441_1274648
transcript_44785.known	chr19	+	668	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	158.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1273311	True	NA	27	True	AATAAA	-35	NA	1276020	1279244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1276104_1277182_1277300_1278776
transcript_44787.nnic	chr19	+	753	3	NNC	ENSG00000228300.14	novel	668	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	229.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	1276036	True	NA	11	True	AATAAA	-19	NA	1276093	1279228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_1276278_1277182_1277300_1278776
transcript_44788.known	chr19	+	751	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	237.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	1276042	False	NA	NA	False	NA	NA	NA	1276099	1278836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1276674_1277182_1277300_1278776
transcript_44789.known	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1276037	False	NA	27	True	AATAAA	-35	NA	1276092	1279244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1277300_1278776
transcript_4479.known	chr1	+	3982	10	FSM	ENSG00000184588.18	ENST00000371045.9	3982	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	6.71648055986996	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGGCCCACTTATTT	66331987	False	NA	19	True	AATAAA	-20	NA	66332003	66374579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66332621_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_44791.nic	chr19	+	1632	5	NIC	ENSG00000160953.17	novel	1513	4	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_4	121.021692270436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	1351196	True	NA	NA	False	NA	NA	NA	1354978	1359894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1358587
transcript_44792.known	chr19	+	1513	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	118.412649474436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	1351189	True	NA	NA	False	NA	NA	NA	1354971	1359894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
transcript_44793.known	chr19	+	522	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	124.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354710	1357094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1355021_1356323_1356450_1357008
transcript_44794.known	chr19	+	1743	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	605.168554695167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	1361014	True	NA	30	True	AATAAA	-26	NA	1383899	1395589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
transcript_44795.known	chr19	+	758	8	FSM	ENSG00000115286.21	ENST00000233627.14	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	204.512261994538	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1361021	True	NA	25	True	AATAAA	-21	NA	1383906	1395584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_44797.known	chr19	+	2818	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	220.897915084975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	1361018	True	NA	22	True	AATAAA	-18	NA	1383903	1395581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_4480.nic	chr1	+	1535	14	ISM	ENSG00000118473.23	ENST00000468286.6	2183	15	69	4701	-1	0	5prime_fragment	FALSE	canonical	0	0	junction_1	1.88736063790543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCAGGAATTTTCTTA	66534073	True	NA	NA	False	AATAAA	-18	NA	66534083	66690531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_66534369_66625846_66625911_66633069_66633095_66635943_66636016_66639776_66639834_66642809_66642865_66643543_66643720_66670994_66671020_66671943_66671996_66673280_66673367_66677003_66677097_66679677_66679753_66689147_66689276_66690189
transcript_44804.known	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	27.7171427098826	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-1397436	True	NA	58	True	NA	NA	NA	1401542	1397025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_44805.known	chr19	+	2086	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	277.981181359607	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	1407595	False	NA	32	True	AATAAA	-23	NA	1407679	1435683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
transcript_44811.known	chr19	+	629	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	8870.42922674358	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307619	True	NA	29	True	AATAAA	-17	NA	1438418	1440494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
transcript_44812.known	chr19	+	550	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	8198.03368023224	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	1307600	True	NA	25	True	AATAAA	-13	NA	1438399	1440490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
transcript_44813.known	chr19	+	711	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8621.60954738151	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307606	True	NA	29	True	AATAAA	-17	NA	1438405	1440494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
transcript_44814.known	chr19	+	473	4	FSM	ENSG00000115268.10	ENST00000589656.6	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_3	8376.53178031736	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTCCTTTGCGCAGC	1307605	True	NA	23	True	AATAAA	-11	NA	1438404	1440488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440018_1440242_1440348
transcript_44815.known	chr19	+	570	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2882.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307621	True	NA	29	True	AATAAA	-17	NA	1438420	1440494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440018
transcript_44816.known	chr19	+	467	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8176.43227004704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307622	True	NA	29	True	AATAAA	-17	NA	1438421	1440494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
transcript_44817.known	chr19	+	873	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	19200	junction_2	653	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307601	True	NA	29	True	AATAAA	-17	NA	1438400	1440494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_44818.nnic	chr19	+	1952	4	FSM	ENSG00000115268.10_ENSG00000268798.1	ENST00000592588.7	501	4	8	-1459	-1	16	multi-exon	FALSE	canonical	3	14741	junction_1	2468.09737787363	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGATTTGCTCGT	1307604	True	NA	NA	False	NA	NA	NA	1438403	1441954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440018_1440254_1440348
transcript_44824.known	chr19	-	1287	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	207.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCGTCTGAATGGTGC	-1472661	True	NA	-12	True	CATAAA	-14	NA	1479183	1474173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478773_1478906_1479113
transcript_44825.known	chr19	-	2243	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_2	74	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	-1472693	True	NA	0	True	ATTAAA	-18	NA	1479215	1473200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478773_1478906_1479162
transcript_44829.known	chr19	-	1265	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	225.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	-1472659	True	NA	-6	True	CATAAA	-20	NA	1479181	1474167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478773_1478906_1479139
transcript_44833.known	chr19	-	1524	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	167.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCGTCTGAATGGT	-1472693	True	NA	-14	True	CATAAA	-12	NA	1479215	1474175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475515_1478773_1478906_1479162
transcript_44834.known	chr19	-	357	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	165.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGCTGGGCATAGT	-1472697	True	NA	NA	False	AATGAA	-33	NA	1479219	1478412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1478581_1478773_1478906_1479162
transcript_44841.known	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-1472694	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478653_1478906_1479162
transcript_44842.known	chr19	-	537	2	FSM	ENSG00000115257.15	ENST00000586074.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGCATGGGACCCACC	-1482654	False	NA	NA	False	NA	NA	NA	1482667	1481985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1482208_1482352
transcript_44843.known	chr19	+	1360	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_4	13.0072095393286	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	1489276	True	NA	27	True	AATAAA	-17	NA	1491180	1497927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
transcript_44853.known	chr19	-	533	4	FSM	ENSG00000127540.12	ENST00000593029.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	2583.06833049379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	-1586556	True	NA	-24	True	ATTAAA	-16	NA	1605443	1598048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1598216_1599411_1599561_1602293_1602427_1605359
transcript_44858.known	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	5127	junction_2	187.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-1586575	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1598216_1599411_1599561_1605359
transcript_4486.known	chr1	+	2262	5	FSM	ENSG00000152760.10	ENST00000282670.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.6809513236909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTATTGTAACAATG	66752305	True	NA	NA	False	AATAAA	-30	NA	66752458	66779047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66752585_66754655_66754778_66770386_66770479_66776278_66776404_66777250
transcript_44865.known	chr19	-	1299	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGGCTCATTTTTCT	-1873734	False	2435	1	True	TATAAA	-33	NA	1876169	1874870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1874900_1876200
transcript_44866.known	chr19	+	2501	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	37.1797435888594	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	1901916	True	NA	12	True	AATAAA	-21	NA	1905398	1926013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_44867.known	chr19	+	1477	6	FSM	ENSG00000227500.10	ENST00000414057.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	105.429787062291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCCAGCAAACCGG	1901895	True	NA	NA	False	NA	NA	NA	1905377	1925016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1905440_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_44868.known	chr19	-	875	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	168.859573479135	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	-2033063	False	NA	-3	True	AATAAA	-22	NA	2042140	2037464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
transcript_44872.known	chr19	-	3387	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	8.25757228245687	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-2095581	True	NA	-13	True	AATAAA	-23	NA	2096326	2071035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_44873.known	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	52.9172408105336	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	2219484	True	NA	21	True	ATTAAA	-13	NA	2236823	2248655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
transcript_44876.known	chr19	-	937	6	FSM	ENSG00000104886.12	ENST00000587394.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	668.550970382962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATATTTCTCAATAA	-2216430	True	NA	NA	False	NA	NA	NA	2236272	2230083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2230613_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_4488.known	chr1	+	758	3	FSM	ENSG00000152760.10	ENST00000525663.5	758	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACGTTTATCCATTACC	66752305	True	NA	NA	False	NA	NA	NA	66752458	66770896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66752585_66754655_66754778_66770386
transcript_44882.nnic	chr19	-	1233	6	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	-71	0	intron_retention	FALSE	canonical	2	219	junction_5	594.887081722237	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2236374	False	NA	-5	True	AATAAA	-18	NA	2236401	2233152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235934_2236154
transcript_44883.known	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_5	78.1050574546873	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216487	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_4489.known	chr1	+	1728	15	FSM	ENSG00000198160.15	ENST00000371014.5	1728	15	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	27.5102949190046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	66923549	True	NA	NA	False	NA	NA	NA	66924958	66986670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_44892.known	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	698.494273419618	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216452	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
transcript_44895.known	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_4	87.0660668687865	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-2216484	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_449.nic	chr1	-	588	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-95	13874	-95	-7840	5prime_fragment	FALSE	canonical	3	85	junction_1	11.9869720947369	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGAGCACGAACGTCG	-1659089	False	NA	13	True	AAGAAA	-3	NA	1659107	1649611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_44903.known	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	682.270503539469	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	-2236622	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
transcript_44904.known	chr19	+	3691	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	39.0850067813994	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	2324608	True	NA	NA	False	ATTAAA	-13	NA	2328683	2355095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
transcript_44906.known	chr19	+	2583	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	50.9193039053371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	2324617	True	NA	29	True	AATAAA	-19	NA	2328692	2353933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
transcript_4492.known	chr1	+	1648	14	FSM	ENSG00000198160.15	ENST00000401042.7	1648	14	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_1	18.1228549026494	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	66930231	False	NA	NA	False	NA	NA	NA	66930242	66986670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_44924.known	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	3225.4334075697	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	2269494	False	NA	109	True	AATAAA	-15	NA	2269508	2273488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
transcript_44929.known	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	1604.88566570955	3828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301261	True	NA	-15	True	AATAAA	-15	NA	2328611	2321520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
transcript_44940.known	chr19	+	969	6	FSM	ENSG00000104904.12	ENST00000582888.8	969	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3324.68781090797	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	2268719	True	NA	31	True	AATAAA	-20	NA	2269533	2273331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2269745_2271390_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_44941.known	chr19	+	726	4	FSM	ENSG00000104904.12	ENST00000592727.3	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	6605	junction_1	195.766868153594	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTGATACTGAAG	2271256	False	NA	-31	True	AATAAA	-42	NA	2271361	2273269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2271531_2271781_2271955_2272734_2272821_2272971
transcript_44942.known	chr19	-	575	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3988	junction_2	303	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAGCCCCGAATCTT	-2301236	True	NA	-14	True	AATAAA	-16	NA	2328586	2321519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2321823_2324124_2324197_2328386
transcript_44943.known	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2154.15448739304	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301127	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
transcript_44944.known	chr19	+	1131	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	6825	junction_3	138.420454493627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	2268705	True	NA	-5	True	NA	NA	NA	2269519	2273221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
transcript_44946.known	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4540	junction_1	56.5	2565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-2364412	True	NA	-2	True	AATAAA	-38	NA	2427586	2425624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2427047_2427255_2427325_2427413
transcript_44947.known	chr19	-	631	3	FSM	ENSG00000099800.8	ENST00000591871.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	2	106	junction_2	2217	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	-2427473	False	NA	-18	True	AATAAA	-16	NA	2427538	2426564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2427047_2427255_2427325_2427458
transcript_4495.nic	chr1	+	1516	14	NIC	ENSG00000198160.15	novel	1648	14	NA	NA	13	-179	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	30.0242505535405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGGCTCAACTGTCTG	66927704	True	NA	1	True	AATAAA	-18	NA	66930255	66986491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984653_66986402
transcript_44950.known	chr19	+	750	4	FSM	ENSG00000099860.9	ENST00000585359.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.5759527879163	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGAACCCCCTCCCC	2475074	False	NA	NA	False	AATACA	-4	NA	2476145	2477657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2476403_2476528_2476629_2477028_2477252_2477487
transcript_44951.known	chr19	+	2007	2	FSM	ENSG00000099860.9	ENST00000592937.1	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTATGTTTTCGGC	2475055	True	NA	26	True	AATAAA	-16	NA	2476126	2478259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2476403_2476528
transcript_44953.known	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	17.6776695296637	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2700083	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
transcript_44956.nnic	chr19	-	440	4	NNC	ENSG00000176533.13	novel	4193	5	NA	NA	-15	-23185	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	74.4057942785521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCAGTTTACCATCCAT	-2700098	True	NA	NA	False	AATAAA	-17	NA	2702709	2538177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_2538457_2555148_2555189_2646223_2646281_2702645
transcript_44957.nic	chr19	-	1101	2	ISM	ENSG00000176533.13	ENST00000382159.8	4193	5	-15	134025	-15	-130251	5prime_fragment	FALSE	canonical	3	132	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAAAAG	-2700098	True	NA	NA	False	NA	NA	NA	2702709	2645243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_2646281_2702645
transcript_44959.known	chr19	-	2940	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTCCACACGGGCA	-2734149	True	NA	-37	True	AATAAA	-18	NA	2740028	2734523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2737380_2739944
transcript_44960.known	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	23.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-2734138	True	NA	-3	True	TTTAAA	-32	NA	2740017	2732523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2733486_2737047_2737380_2739944
transcript_44961.known	chr19	-	2316	12	FSM	ENSG00000104969.11	ENST00000678109.1	2316	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	234.597633378465	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	-2769295	True	NA	-12	True	AATAAA	-9	NA	2783362	2754722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768964_2769092_2783232
transcript_44964.known	chr19	-	2854	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	221.574941149613	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	-2769174	True	NA	-12	True	AATAAA	-9	NA	2783241	2754722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
transcript_44966.known	chr19	+	4761	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_8	49.9407287580877	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	2775888	True	NA	NA	False	AATAAA	-18	NA	2785502	2815807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
transcript_44967.nic	chr19	+	2505	13	NIC	ENSG00000172009.15	novel	4761	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	157.249801271735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	2775900	True	NA	23	True	ATTAAA	-17	NA	2785514	2813599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811633_2811735_2813114
transcript_44969.nnic	chr19	+	869	7	NNC	ENSG00000172009.15	novel	4761	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	216.173862640442	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	2775900	True	NA	23	True	ATTAAA	-17	NA	2785514	2813599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805044_2813495
transcript_44970.known	chr19	+	8504	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.8415464455544	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAAAGCTTCAC	2840543	True	NA	NA	False	ATTAAA	-16	NA	2841474	2860471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
transcript_44976.known	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.12825877028341	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	2899465	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
transcript_44978.known	chr19	-	788	5	FSM	ENSG00000253392.3	ENST00000654521.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTTCACTGTCTTCC	NA	False	NA	NA	False	AGTAAA	-26	NA	2926817	2908370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2908727_2915146_2915287_2917004_2917107_2919016_2919175_2926785
transcript_44979.known	chr19	-	2040	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40870359029762	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-2944755	False	NA	0	True	AATAAA	-23	NA	2944971	2933217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
transcript_44980.known	chr19	+	1977	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	3.94443833137241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	2977403	True	NA	4	True	AATAAA	-17	NA	2977563	2995179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_44982.known	chr19	+	456	3	FSM	ENSG00000104953.20	ENST00000482627.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	2977389	True	NA	3	True	ATTAAA	-44	NA	2977549	2980407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2977611_2978197_2978285_2980099
transcript_44984.known	chr19	+	1883	16	FSM	ENSG00000104953.20	ENST00000452088.5	1883	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.4840457922134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	2977419	True	NA	4	True	AATAAA	-17	NA	2977579	2995179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2977620_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_4499.known	chr1	+	4818	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.8628087928483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGCTATCGATGG	66930231	False	NA	17	True	AATAAA	-18	NA	66930242	66988030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_44996.nic	chr19	-	1040	5	ISM	ENSG00000065717.15	ENST00000455444.6	2253	18	23059	5	2804	0	3prime_fragment	FALSE	canonical	3	88	junction_4	9.12414379544733	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-3006052	True	NA	-12	True	AATAAA	-15	NA	3006072	2997643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720
transcript_45.known	ERCC-00120	+	520	1	FSM	ERCC-00120A	DQ854992	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00120_+_0_500
transcript_45002.known	chr19	-	1798	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	0	0	0	multi-exon	FALSE	canonical	3	2075	junction_2	205.538858180691	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-3062276	True	NA	-10	True	AATAAA	-16	NA	3062495	3052909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
transcript_45003.known	chr19	-	1884	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	893.732249240976	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-3063078	True	NA	-10	True	AATAAA	-16	NA	3063107	3052909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_45004.nnic	chr19	-	1473	7	NNC	ENSG00000104964.15	novel	1798	7	NA	NA	301	53	intron_retention	FALSE	non_canonical	0	0	junction_6	899.536670860184	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTTTTTATTTT	-3061860	False	NA	-27	True	AATAAA	-16	NA	3061889	3053158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3061643
transcript_45007.known	chr19	+	4190	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.69991708074726	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	3092347	True	NA	13	True	AATAAA	-14	NA	3094361	3123999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_45009.known	chr19	+	3680	15	FSM	ENSG00000125912.11	ENST00000246117.9	3680	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	94.3225306908077	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3179440	True	NA	35	True	AATAAA	-21	NA	3185929	3209575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
transcript_45011.nic	chr19	+	786	4	ISM	ENSG00000161082.13	ENST00000292672.7	1896	13	61210	0	1109	0	3prime_fragment	FALSE	canonical	2	12	junction_2	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	3285608	True	NA	NA	False	AATAAA	-17	NA	3285870	3297076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_3286026_3290230_3290375_3293318_3293487_3296757
transcript_45013.nnic	chr19	-	798	4	NNC	ENSG00000095932.7	novel	1312	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	12.675435561221	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	-3478854	True	NA	-17	True	ATTAAA	-21	NA	3479108	3474406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3474997_3478418_3478479_3478817_3478930_3479072
transcript_45014.nnic	chr19	-	881	4	NNC	ENSG00000095932.7	novel	1312	4	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	9.84321537348893	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	-3478989	True	NA	-17	True	ATTAAA	-21	NA	3479243	3474406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3474997_3478418_3478479_3478817_3478930_3479124
transcript_45016.known	chr19	-	1312	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	11.4309521329882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCGCTCTGTCA	-3480503	True	NA	NA	False	NA	NA	NA	3480525	3473985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
transcript_45019.known	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	-3478834	True	NA	-118	True	NA	NA	NA	3479088	3474507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3474997_3478418_3478479_3478817
transcript_45020.known	chr19	-	660	2	FSM	ENSG00000095932.7	ENST00000591708.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	-3478466	False	254	-17	True	ATTAAA	-21	NA	3478488	3474406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3474997_3478418
transcript_45024.known	chr19	+	2434	8	FSM	ENSG00000064961.19	ENST00000488973.6	2434	8	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	62.4195809152277	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTAAGCTTGTTTG	3555646	True	NA	27	True	AATAAA	-29	NA	3572978	3579088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_45025.known	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	15.0229823936527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-3759527	True	NA	97	True	ATTAAA	-16	NA	3761692	3750771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
transcript_45028.known	chr19	-	575	2	FSM	ENSG00000011132.12	ENST00000591678.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTCCTTACAGGCCAGG	-3749566	False	NA	NA	False	NA	NA	NA	3751731	3751065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3751098_3751188
transcript_45029.known	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	52	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	3758873	True	NA	22	True	AATAAA	-22	NA	3762681	3767565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3762819_3765165_3765332_3767260
transcript_45031.nnic	chr19	-	1009	4	NNC	ENSG00000105278.12	novel	1019	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	55.5937646383717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866825	True	NA	0	True	AATAAA	-25	NA	3869038	3851804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3852137_3852169_3852615_3855401_3855560_3868964
transcript_45032.nnic	chr19	-	1149	4	NNC	ENSG00000105278.12	novel	715	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.5297717945568	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866828	True	NA	0	True	AATAAA	-25	NA	3869041	3851804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3852137_3852169_3852615_3855401_3855697_3868964
transcript_45037.nnic	chr19	-	851	3	NNC	ENSG00000105278.12	novel	1019	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866825	True	NA	0	True	AATAAA	-25	NA	3869038	3851804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3852137_3852169_3852615_3868964
transcript_45039.known	chr19	-	1019	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	37	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3868980	False	NA	0	True	AATAAA	-25	NA	3869015	3851804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3852615_3855401_3855560_3868964
transcript_4504.known	chr1	+	3875	16	FSM	ENSG00000198160.15	ENST00000371018.7	3875	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	39.5839473636585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66924894	66988619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66925096_66926141_66926243_66928889_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984653_66986402
transcript_45040.nic	chr19	-	1182	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	33	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866828	True	NA	0	True	AATAAA	-25	NA	3869041	3851804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_3852615_3855401_3855697_3868964
transcript_45041.known	chr19	-	870	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATGTGAATTTCAT	-3866819	True	NA	-8	True	AATAAA	-17	NA	3869032	3851812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3852615_3868964
transcript_45044.known	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	8.82664841387841	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	3879326	True	NA	14	True	AATAAA	-18	NA	3880684	3928082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_45046.nic	chr19	+	1152	7	ISM	ENSG00000077009.14	ENST00000168977.7	1160	8	287	0	240	0	3prime_fragment	FALSE	canonical	3	370	junction_5	64.5249736320924	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGTGTCTACCGTGTT	3933320	True	NA	15	True	AGTAAA	-20	NA	3933355	3942416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_45052.known	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6884	junction_14	759.65372414821	1835	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-3874955	True	NA	-15	True	AATAAA	-17	NA	3985463	3976055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
transcript_4506.nic	chr1	+	873	8	ISM	ENSG00000198160.15	ENST00000371014.5	1728	15	-44	23523	20	3069	5prime_fragment	FALSE	canonical	3	22	junction_1	30.0448644122589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAAAAAGGTGGGTT	66923505	True	NA	NA	False	NA	NA	NA	66924914	66963147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_45068.known	chr19	+	3069	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_9	9.42814934120159	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	3998410	True	NA	17	True	AATAAA	-20	NA	4007735	4039386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
transcript_45069.nic	chr19	-	1582	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	20.2192068719476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180940	True	NA	-4	True	AATAAA	-19	NA	4182585	4174108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_4507.nic	chr1	+	736	7	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	13	23523	13	3069	5prime_fragment	FALSE	canonical	3	43	junction_1	18.5060050314005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAAAAAGGTGGGTT	66927704	True	NA	NA	False	NA	NA	NA	66930255	66963147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_45071.known	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	10.5482371096998	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180918	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_45076.known	chr19	-	1361	7	FSM	ENSG00000077463.15	ENST00000601488.5	1361	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	29.8272805777977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180902	True	NA	-4	True	AATAAA	-19	NA	4182547	4174108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_45077.known	chr19	-	1473	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	24.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	-4180920	True	NA	-5	True	AATAAA	-18	NA	4182565	4174109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_45078.known	chr19	-	827	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	25.1925915035882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTCCCCAGCTGAC	-4180855	True	NA	NA	False	NA	NA	NA	4182500	4174635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_45079.known	chr19	-	1506	7	FSM	ENSG00000077463.15	ENST00000305232.10	1506	7	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	24.1292814278051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180905	True	NA	-4	True	AATAAA	-19	NA	4182550	4174108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_45082.known	chr19	-	371	2	FSM	ENSG00000077463.15	ENST00000594341.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATTCCAGACCAGC	-4180901	True	NA	NA	False	NA	NA	NA	4182546	4180611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4180910_4182473
transcript_45084.known	chr19	+	1158	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.78535710713571	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	4229436	True	NA	5	True	AATAAA	-1	NA	4229522	4237528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
transcript_45086.known	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	24.3595516194786	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	4245002	True	NA	14	True	AATAAA	-15	NA	4247079	4269088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_45087.nnic	chr19	+	1593	8	NNC	ENSG00000105248.16	novel	1431	8	NA	NA	-432	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	75.1740836801012	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	4245505	False	NA	14	True	AATAAA	-15	NA	4247582	4269088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_4247836_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_45089.known	chr19	-	1020	1	FSM	ENSG00000280247.1	ENST00000622962.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGCCCCAAGGGCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	4247358	4246338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4246300_4247400
transcript_45090.nic	chr19	+	545	3	ISM	ENSG00000105251.11	ENST00000593383.1	558	4	1673	-69	325	0	3prime_fragment	FALSE	canonical	2	17	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	4284691	True	NA	2	True	AATAAA	-13	NA	4284755	4290722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_4284905_4288242_4288363_4290446
transcript_45091.known	chr19	-	1212	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	1.4790199457749	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	-4302324	True	NA	NA	False	AATAAA	-17	NA	4302393	4292231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
transcript_45094.known	chr19	+	1634	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	120.106521009015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	4300609	True	NA	-20	True	NA	NA	NA	4304675	4323806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
transcript_45095.nnic	chr19	+	1732	13	NNC	ENSG00000105255.11	novel	1833	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_11	125.458132680012	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	4300577	True	NA	10	True	AATAAA	-15	NA	4304643	4323836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323183_4323347_4323437_4323532
transcript_45096.known	chr19	+	1833	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_6	31.770881147505	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	4300531	True	NA	10	True	AATAAA	-15	NA	4304597	4323836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_4510.known	chr1	-	6193	12	FSM	ENSG00000116704.8	ENST00000235345.6	6193	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.67929206269965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGACTAATCCAGAGC	-67054040	True	NA	NA	False	AATAAA	-45	NA	67054148	66999349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955_67052990_67053810
transcript_45111.known	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	26.7907270441762	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338113	True	NA	-6	True	ATTAAA	-16	NA	4338827	4324042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_45112.known	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.2016371888825	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338107	True	NA	-6	True	ATTAAA	-16	NA	4338821	4324042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_45113.known	chr19	+	1614	13	FSM	ENSG00000008382.16	ENST00000599840.6	1614	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	25.8009205262138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	4341286	True	NA	7	True	AATAAA	-16	NA	4343561	4360078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_45114.known	chr19	+	1445	12	FSM	ENSG00000008382.16	ENST00000597036.5	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	37.0293606982217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	4341435	False	NA	-33	True	NA	NA	NA	4343710	4360038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357339_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_45116.known	chr19	+	379	3	FSM	ENSG00000008382.16	ENST00000601877.1	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGTGGCCAGGCCCAGT	4352972	False	NA	3	True	AATAAA	-13	NA	4352989	4354577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4353030_4354044_4354130_4354323
transcript_45117.known	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	45.1830296996506	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-4391791	True	NA	-6	True	ATTAAA	-15	NA	4400547	4360369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
transcript_45119.known	chr19	+	2027	1	FSM	ENSG00000280239.1	ENST00000624986.1	2027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGACGCATTCTCATA	4448758	False	NA	NA	False	AATAAA	-27	NA	4448809	4450836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4448800_4450800
transcript_45121.known	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	TRUE	canonical	3	777	junction_5	54.4301387100933	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	-4656128	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
transcript_45122.known	chr19	-	2025	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	14.4997605344211	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGACTGTCTGTGGTCGC	-4720536	True	NA	-5	True	AATAAA	-35	NA	4723750	4694316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_45123.known	chr19	+	739	5	FSM	ENSG00000176840.13	ENST00000669408.1	739	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGGCCTCAGCAC	4769020	True	NA	NA	False	AATAAA	-37	NA	4769134	4772537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4769170_4769283_4769352_4769629_4769758_4770087_4770222_4772163
transcript_45124.known	chr19	+	603	4	FSM	ENSG00000176840.13	ENST00000588711.6	603	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGGCCTCAGCAC	4769018	True	NA	NA	False	AATAAA	-37	NA	4769132	4772537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4769170_4769287_4769352_4769629_4769758_4772163
transcript_45125.known	chr19	-	418	2	FSM	ENSG00000268536.2	ENST00000598782.2	627	2	111	98	111	-98	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGGGATAAATAGAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	4791207	4785119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4785528_4791197
transcript_45126.known	chr19	-	2684	2	FSM	ENSG00000127666.11	ENST00000248244.6	2684	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCAGCGCCATTGTCTTC	-4831636	True	NA	-24	True	AATAAA	-16	NA	4831712	4815931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4818517_4831613
transcript_45128.known	chr19	-	2154	8	FSM	ENSG00000105355.9	ENST00000592528.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	250.443524938605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	-4860121	True	NA	-44	True	NA	NA	NA	4867653	4838368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852266_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_45129.known	chr19	-	1535	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.291317323819	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGGCTCTCAAAACGG	-4860162	True	NA	NA	False	NA	NA	NA	4867694	4839061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_45134.known	chr19	-	279	1	FSM	ENSG00000233270.1	ENST00000435815.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	5576938	5576659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5576700_5576900
transcript_45138.known	chr19	+	3042	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_18	229.232545682327	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	5594540	True	NA	57	True	AATAAA	-26	NA	5623098	5668478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_45139.known	chr19	+	3014	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_18	140.503167224088	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	5594559	True	NA	45	True	AATAAA	-14	NA	5623117	5668466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_45141.nic	chr19	+	2579	20	NIC	ENSG00000160633.13	novel	3064	21	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	289.578641259476	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	5594491	True	NA	50	True	AATAAA	-19	NA	5623049	5668471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_4515.known	chr1	-	6676	8	FSM	ENSG00000142864.15	ENST00000370994.8	6676	8	0	0	0	0	multi-exon	FALSE	canonical	3	1979	junction_5	929.55161453339	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	-67331859	True	NA	-6	True	AGTAAA	-21	NA	67430415	67407809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_45155.known	chr19	-	3167	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_14	43.774735864423	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	-5615503	True	NA	-17	True	AATAAA	-15	NA	5622776	5586998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_45157.known	chr19	+	874	6	FSM	ENSG00000130255.13	ENST00000577222.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6838.83881956579	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTCCCTGAAATAAAGA	5680162	True	NA	8	True	AAGAAA	-19	NA	5681181	5691633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5681272_5684964_5685120_5690030_5690328_5690505_5690601_5691318_5691454_5691531
transcript_4516.known	chr1	-	6681	8	FSM	ENSG00000142864.15	ENST00000361219.11	6681	8	0	0	0	0	multi-exon	FALSE	canonical	3	2021	junction_5	918.423449533526	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	-67331846	True	NA	-6	True	AGTAAA	-21	NA	67430402	67407809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_45164.known	chr19	+	730	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.326921891156	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	NA	False	NA	NA	False	AATAAA	-23	NA	5681047	5685589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
transcript_45170.known	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	37.4195433192633	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5674234	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
transcript_45171.known	chr19	-	577	4	FSM	ENSG00000174917.9	ENST00000587589.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	279.43077059543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCTGGTAT	-5674206	True	NA	NA	False	AATAAA	-2	NA	5680488	5678914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680457
transcript_45173.known	chr19	+	399	3	FSM	ENSG00000167733.14	ENST00000577701.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	29.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCGAGGAAA	5681043	True	NA	NA	False	AATAAA	-44	NA	5681054	5685328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5681272_5684964_5685120_5685301
transcript_45177.known	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	283.695063208525	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5680202	False	6282	-7	True	AATAAA	-15	NA	5680252	5678421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
transcript_45178.known	chr19	-	586	4	FSM	ENSG00000174917.9	ENST00000585605.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	302.41288920209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGACCCGTGTGCTGGC	-5679713	False	NA	-6	True	AATAAA	-16	NA	5679763	5678420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5678649_5678774_5678903_5679344_5679397_5679585
transcript_45179.known	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3077.55534294493	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	5498632	True	NA	44	True	ATTAAA	-17	NA	5690294	5691875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
transcript_4518.known	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1230.14789222056	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	-67331816	True	NA	NA	False	AATATA	-24	NA	67430372	67412866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_45180.known	chr19	+	556	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	14569	junction_2	662	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	5498653	True	NA	42	True	AATAAA	-17	NA	5690315	5691667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5690601_5691318_5691454_5691531
transcript_45181.known	chr19	+	452	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3544.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	5498643	True	NA	28	True	AATAAA	-3	NA	5690305	5691653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5690328_5690505_5690601_5691318
transcript_45185.known	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	1251.08979993444	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	-5871327	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_4519.known	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1222.76144485358	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	-67331830	True	NA	-32	True	AATAAA	-34	NA	67430386	67411037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_45191.known	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2497	junction_1	209.19103443716	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871363	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
transcript_45196.known	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	149	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871344	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5896576_5896904_5896998_5903611
transcript_45197.known	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_9	75.7928756546418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	-5970632	True	NA	-37	True	NA	NA	NA	5978086	5917351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_45199.known	chr19	-	1783	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	0	0	0	multi-exon	TRUE	canonical	3	240	junction_9	85.3759268698671	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGACTGGAGACCTCG	-5970639	True	NA	-8	True	NA	NA	NA	5978093	5917322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_452.nic	chr1	-	563	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-95	16700	-95	-10666	5prime_fragment	FALSE	canonical	3	95	junction_3	9.7410927974683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAGCATTTACTTTCT	-1659089	False	NA	23	True	NA	NA	NA	1659107	1652437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_45201.known	chr19	-	2376	2	FSM	ENSG00000087903.13	ENST00000587700.1	2376	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	-6199289	True	NA	NA	False	AGTAAA	-11	NA	6199529	6189727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6192054_6199479
transcript_45202.nnic	chr19	+	368	2	FSM	ENSG00000266983.2	ENST00000692109.1	388	2	18	2	9	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGCGTCTGCTGATT	5978095	True	NA	11	True	AATAAA	-16	NA	5978372	5980727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5978515_5980501
transcript_45206.known	chr19	+	2410	6	FSM	ENSG00000125656.11	ENST00000245816.11	2410	6	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	33.2962460346508	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGCGGTGGCTCACGCC	6353228	True	NA	NA	False	AATAAA	-19	NA	6361530	6370242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_45211.known	chr19	+	1346	5	FSM	ENSG00000125656.11	ENST00000596070.1	1346	5	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	36.2172265641642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCTGGGCCTCCTCTC	6353262	True	NA	NA	False	NA	NA	NA	6361564	6368707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6361773_6361868_6362543_6364451_6364640_6366257_6366364_6368537
transcript_45212.known	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	89.3582054927744	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	6366292	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
transcript_45214.known	chr19	+	603	4	FSM	ENSG00000125652.8	ENST00000596657.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	298.617927570778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	6373459	False	NA	11	True	AATAAA	-18	NA	6373470	6375027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6373558_6374202_6374377_6374464_6374590_6374810
transcript_45215.known	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	294.378441239617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	6373687	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
transcript_45216.nnic	chr19	+	718	4	NNC	ENSG00000125652.8	novel	970	4	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	277.892465213115	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	6373713	False	NA	15	True	AATAAA	-22	NA	6373819	6375031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_6374018_6374202_6374377_6374464_6374590_6374810
transcript_45218.known	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_10	33.6373634850031	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-6387515	True	NA	-36	True	AATAAA	-18	NA	6393164	6379571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_45240.known	chr19	+	733	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	67.0312427156173	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460343	True	NA	12	True	TATAAA	-24	NA	6464282	6467221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
transcript_45241.known	chr19	+	1086	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	19.7709101684492	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460331	True	NA	12	True	TATAAA	-24	NA	6464270	6467221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
transcript_45242.known	chr19	-	2277	4	FSM	ENSG00000104833.12	ENST00000264071.7	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCGAATCCCTCT	-6500557	True	NA	-12	True	AATAAA	-22	NA	6502309	6494318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6496222_6501286_6501398_6501514_6501624_6502155
transcript_45243.known	chr19	-	911	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	-6591060	True	NA	NA	False	ATTAAA	-15	NA	6591150	6585838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6586406_6590102_6590137_6590840
transcript_45244.nic	chr19	-	2025	18	NIC	ENSG00000125734.16	novel	2009	18	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	68.4114359407405	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6737197	False	1825	-4	True	NA	NA	NA	6737302	6730054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_45245.nic	chr19	-	1853	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	65.2970852531761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6737492	False	NA	-4	True	NA	NA	NA	6737597	6730054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_45247.known	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_17	42.4832961271485	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	-6737155	False	1825	-35	True	NA	NA	NA	6737260	6730085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_45249.known	chr19	-	2057	18	FSM	ENSG00000125734.16	ENST00000264080.12	2034	18	-23	0	-23	0	multi-exon	FALSE	canonical	3	152	junction_17	36.6453120157758	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGCATGCAGGGCCCAA	-6737498	False	NA	NA	False	AATAAA	-15	NA	6737603	6729913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_45255.known	chr19	-	1834	18	FSM	ENSG00000125734.16	ENST00000597706.5	1834	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	74.8017911448483	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCAGCTATGTGTACA	-6735735	True	NA	-47	True	NA	NA	NA	6737560	6730097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732471_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_45258.known	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	164.09864979306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	6731357	True	NA	11	True	NA	NA	NA	6739761	6751464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
transcript_45259.known	chr19	+	2035	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	43.3077606229821	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	6731275	True	NA	33	True	TATAAA	-18	NA	6739679	6751526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_45268.nic	chr19	-	1204	4	ISM	ENSG00000125731.13	ENST00000597687.1	859	6	-87	4502	-87	-1788	5prime_fragment	FALSE	canonical	3	132	junction_2	8.28653526310404	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACAATTATTCCAAG	-6765453	True	NA	NA	False	NA	NA	NA	6767550	6759117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6759671_6760637_6760988_6763679_6763817_6767386
transcript_45270.nic	chr19	-	865	2	ISM	ENSG00000125731.13	ENST00000245908.11	2281	10	13709	0	1515	0	3prime_fragment	FALSE	canonical	3	163	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	-6753443	True	NA	-1	True	AATAAA	-22	NA	6753726	6752159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6752754_6753455
transcript_45271.nic	chr19	-	1471	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-125	7604	-87	-5180	5prime_fragment	FALSE	canonical	3	152	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGCCGGAAGAAAA	-6765453	True	NA	NA	False	NA	NA	NA	6767550	6762509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6763817_6767386
transcript_45272.nic	chr19	-	707	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-73	8316	-35	-5892	5prime_fragment	FALSE	canonical	3	152	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTATGCGCCTGTA	-6765401	True	NA	NA	False	AATAAA	-20	NA	6767498	6763221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6763817_6767386
transcript_45273.known	chr19	+	5759	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.39970842444753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	7068590	True	NA	NA	False	ATTAAA	-30	NA	7069702	7087968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_45276.known	chr19	+	5736	8	FSM	ENSG00000130544.12	ENST00000414706.2	5736	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.0995626366713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	7068592	True	NA	NA	False	ATTAAA	-30	NA	7069704	7087968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075675_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_45282.known	chr19	-	1078	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	12.8646803302686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-7488721	True	NA	-5	True	ATTAAA	-16	NA	7489035	7476874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_45283.known	chr19	-	806	5	FSM	ENSG00000104883.8	ENST00000593547.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	23.3291662945764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTAAACATTGTGGT	-7488658	False	NA	-31	True	NA	NA	NA	7488972	7476900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7477254_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_45284.nnic	chr19	-	1018	4	NIC	ENSG00000104883.8	novel	1078	5	NA	NA	-13	-9	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	26.8369562771605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTGGCGCCTGGCTCA	-7488734	True	NA	-15	True	ATTAAA	-6	NA	7489048	7476884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_7477437_7482032_7482212_7485837_7486027_7488950
transcript_45288.nic	chr19	+	1604	10	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19411	0	-133	0	3prime_fragment	FALSE	canonical	1	134	junction_5	71.6999922516655	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7555072	True	NA	22	True	AATAAA	-16	NA	7555127	7561764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_45289.nic	chr19	+	1479	9	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19775	0	231	0	3prime_fragment	FALSE	canonical	1	134	junction_4	75.1555678243468	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7555436	False	NA	22	True	AATAAA	-16	NA	7555491	7561764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_45291.known	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_6	28.854038808381	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	-7623743	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
transcript_45297.known	chr19	+	1859	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	91.8466415039524	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	7631081	True	NA	21	True	AATAAA	-21	NA	7637126	7647873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_45311.known	chr19	+	375	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1543.73692302154	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7619720	True	NA	13	True	AATATA	-26	NA	7629838	7631624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
transcript_45314.nic	chr19	+	588	4	ISM	ENSG00000229833.10	ENST00000598540.6	375	5	-62	0	-16	0	intron_retention	FALSE	canonical	3	40	junction_3	1452.60624013836	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7619658	True	NA	13	True	AATATA	-26	NA	7629776	7631624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231
transcript_45315.known	chr19	+	663	4	FSM	ENSG00000229833.10	ENST00000594797.6	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	2942	junction_1	189.519274891911	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCATTTGAGTGTGAG	7619674	True	NA	NA	False	NA	NA	NA	7629792	7631956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631472
transcript_45319.known	chr19	+	332	3	FSM	ENSG00000229833.10	ENST00000601406.5	332	3	0	0	0	0	multi-exon	FALSE	canonical	3	2942	junction_1	166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCCATGTCTACAGAAA	7619705	True	NA	NA	False	NA	NA	NA	7629823	7631030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630572_7630660_7630822
transcript_45322.known	chr19	+	219	3	FSM	ENSG00000229833.10	ENST00000456958.7	219	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1671	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	7619695	True	NA	9	True	AATATA	-22	NA	7629813	7631620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630822_7630847_7631472
transcript_45325.known	chr19	+	411	2	FSM	ENSG00000181029.9	ENST00000595985.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTGTCTTGTGTCT	7682202	True	NA	26	True	GATAAA	-19	NA	7682242	7682854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7682323_7682523
transcript_45326.nic	chr19	-	1030	5	ISM	ENSG00000182566.15	ENST00000328853.11	1299	9	1228	1	1228	0	3prime_fragment	FALSE	canonical	1	2	junction_2	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTCTGGCGAGATC	-7730833	True	NA	NA	False	AATAAA	-22	NA	7730882	7728957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_7729505_7729820_7729937_7730018_7730168_7730350_7730441_7730754
transcript_45328.nic	chr19	+	1626	4	ISM	ENSG00000268297.1	ENST00000596555.1	870	9	1224	-392	1224	392	intron_retention	FALSE	canonical	2	7	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCCTGGCTCTGGT	7788750	True	NA	3	True	AATAAA	-16	NA	7788772	7791013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7788901_7789208_7789305_7789495_7789644_7789759
transcript_45329.nic	chr19	+	1777	3	ISM	ENSG00000142459.9	ENST00000270530.8	3855	19	32707	0	2355	0	3prime_fragment	FALSE	canonical	3	50	junction_2	20.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7862661	True	NA	22	True	AATAAA	-18	NA	7862939	7864976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7863068_7863184_7863281_7863423
transcript_45330.known	chr19	+	3375	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	9.48894093142117	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	7898647	True	NA	17	True	AATAAA	-19	NA	7903876	7914478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_45331.known	chr19	+	1413	5	FSM	ENSG00000104976.12	ENST00000597584.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	85.5756244499565	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	7920970	True	NA	24	True	AATAAA	-24	NA	7921014	7923250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7921120_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_45336.known	chr19	-	1797	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_9	130.797128748642	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGCAGAAGAGCAGC	-7938226	True	NA	-27	True	AATAAA	-4	NA	7943635	7926735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
transcript_45342.known	chr19	-	556	3	FSM	ENSG00000104980.8	ENST00000600000.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCCGCCTCAGCCTT	-7938257	True	NA	NA	False	NA	NA	NA	7943666	7937797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7938198_7941101_7941198_7943606
transcript_45347.known	chr19	-	569	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	911.94147290273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	-8309097	True	NA	-2	True	AATAAA	-13	NA	8321375	8308767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
transcript_45353.known	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	577.440521227559	7178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	8173550	True	NA	30	True	AATAAA	-30	NA	8321495	8323340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
transcript_45354.known	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_3	857.850155265411	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297538	True	NA	-1	True	ATTAAA	-17	NA	8308350	8302126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
transcript_45358.known	chr19	-	580	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	2005	junction_2	83.9616314488681	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGAGCCACCACAC	-8309097	True	NA	53	True	NA	NA	NA	8321375	8311283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
transcript_45363.known	chr19	+	1523	3	FSM	ENSG00000233927.5	ENST00000449223.3	1523	3	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	151.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCAATCTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	8321157	8322946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321570_8321655_8322092_8322271
transcript_45368.known	chr19	+	912	2	FSM	ENSG00000233927.5	ENST00000602140.1	912	2	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCGGTCTTGCCAAACG	8173549	True	NA	137	True	NA	NA	NA	8321494	8322492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321570_8321655
transcript_45370.known	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_4	90.5189897203896	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297546	True	NA	-1	True	ATTAAA	-17	NA	8308358	8302126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
transcript_45371.known	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	9922	junction_2	522.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	8321622	False	NA	41	True	AATAAA	-21	NA	8321633	8322396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321704_8321952_8322092_8322271
transcript_45374.known	chr19	+	1590	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_4	88.7760525141775	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	8372683	True	NA	37	True	NA	NA	NA	8390359	8404434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
transcript_45377.known	chr19	+	894	4	FSM	ENSG00000185236.12	ENST00000594216.1	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_1	24.6576560118759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGGATTACAGGCGT	8372716	True	NA	NA	False	NA	NA	NA	8390392	8402924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484
transcript_45381.known	chr19	+	2568	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1120.79870899897	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	NA	False	NA	44	True	AATAAA	-17	NA	8444766	8489114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_45388.nic	chr19	+	2411	16	NIC	ENSG00000099783.12	novel	2568	17	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1268.78703230027	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	8385957	True	NA	44	True	AATAAA	-17	NA	8444869	8489114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_45392.known	chr19	+	2477	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1132.26468048185	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	8386062	True	NA	44	True	AATAAA	-17	NA	8444974	8489114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_45402.nic	chr19	+	2528	15	NIC	ENSG00000099783.12	novel	2477	16	NA	NA	-50	0	intron_retention	FALSE	canonical	0	0	junction_3	1294.30056953001	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	8385957	True	NA	44	True	AATAAA	-17	NA	8444869	8489114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_45406.known	chr19	+	2458	15	FSM	ENSG00000099783.12	ENST00000620401.4	2458	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	957.010929074139	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386077	True	NA	40	True	AATAAA	-13	NA	8444989	8489110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8445112_8455404_8455575_8462528_8462590_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_45432.nic	chr19	-	956	4	ISM	ENSG00000142347.19	ENST00000644032.2	4180	28	51867	334	1047	-315	3prime_fragment	FALSE	canonical	3	10	junction_2	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACGAGTTAACTTACTAAG	-8525540	False	NA	-16	True	AATAAA	-17	NA	8525575	8521111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_8521605_8522376_8522547_8522633_8522830_8525478
transcript_45444.known	chr19	+	4675	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	16.6332999331662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	9323163	True	NA	NA	False	AATAAA	-24	NA	9324178	9345871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_45449.known	chr19	+	967	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.6589920437153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	9323163	True	NA	NA	False	NA	NA	NA	9324178	9342148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_45450.known	chr19	+	2991	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	18.6182705963792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323760	False	NA	4	True	AATAAA	-18	NA	9323771	9343843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_45453.known	chr19	+	2117	4	FSM	ENSG00000188321.14	ENST00000605750.5	2117	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	7.93025150224688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACACATTGAGAAGTC	9323181	True	NA	NA	False	NA	NA	NA	9324196	9343610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9341101_9341185_9341694
transcript_45455.nic	chr19	+	788	2	ISM	ENSG00000188321.14	ENST00000592504.5	1398	6	-2	16654	-2	-13152	5prime_fragment	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCTGTTTCAAAAAGAAG	9323161	True	NA	NA	False	NA	NA	NA	9324176	9325430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_9324229_9324694
transcript_45457.known	chr19	+	2732	7	FSM	ENSG00000188321.14	ENST00000317221.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2381652659853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323163	True	NA	4	True	AATAAA	-18	NA	9324178	9343843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9337795_9337866_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_45461.known	chr19	-	2815	10	FSM	ENSG00000198028.4	ENST00000301480.5	2815	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	7.25888132047159	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTGATGAGTC	-9498020	True	NA	NA	False	AAAACA	-20	NA	9498616	9466354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9468335_9469104_9469188_9469629_9469711_9470391_9470519_9471295_9471379_9473178_9473260_9474198_9474326_9475283_9475370_9498127_9498216_9498537
transcript_45464.known	chr19	-	7104	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	8.17162836918577	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-9536320	True	NA	-3	True	AATAAA	-19	NA	9538645	9523222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_45466.nic	chr19	-	2720	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	-171	4784	-171	0	intron_retention	FALSE	canonical	3	24	junction_6	3.590109871423	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	9538816	9528006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_45470.known	chr19	-	919	6	FSM	ENSG00000130818.12	ENST00000589289.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.2898331965898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTACGAATGGAGGAAT	-9536063	False	NA	NA	False	NA	NA	NA	9538388	9529296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9529637_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_45471.known	chr19	-	2402	6	FSM	ENSG00000130818.12	ENST00000593003.5	2402	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	10.283968105746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-9536265	True	NA	NA	False	NA	NA	NA	9538590	9528006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9536207_9536357_9538258
transcript_45474.known	chr19	+	859	2	FSM	ENSG00000278611.3	ENST00000619671.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	9538510	True	NA	16	True	AATAAA	-22	NA	9538738	9539734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9538999_9539135
transcript_45477.nnic	chr19	-	1459	5	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	28.0757902827329	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-9576687	True	NA	-12	True	AATAAA	-17	NA	9584544	9560328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_9560768_9566335_9567110_9568094_9568176_9569001_9569083_9584460
transcript_45478.nnic	chr19	-	1140	5	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	-40	2284	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.4913450014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGTCTCGCTGTGTTG	-9576687	True	NA	NA	False	ATTAAA	-16	NA	9584544	9564375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_9564496_9566335_9567110_9568094_9568176_9569001_9569083_9584460
transcript_45479.known	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.0724477007517	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-9576647	True	NA	-12	True	AATAAA	-17	NA	9584504	9560328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
transcript_45487.known	chr19	-	1712	6	FSM	ENSG00000171466.10	ENST00000590155.5	1712	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.49933330370107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTCCTAAATGCCTTTT	-9673661	True	NA	-113	True	NA	NA	NA	9675082	9652712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9653879_9656546_9656654_9658008_9658136_9659378_9659468_9660719_9660875_9675014
transcript_45492.known	chr19	+	2486	5	FSM	ENSG00000267106.9	ENST00000586614.6	2486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	34.3465791600852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620101	True	NA	NA	False	NA	NA	NA	9621504	9635446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9626783_9626861_9627715_9627807_9632227_9632418_9633459
transcript_45496.known	chr19	-	1475	5	FSM	ENSG00000171466.10	ENST00000585688.5	1475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.96419413859206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTCACACTGGGGAG	-9673659	True	NA	NA	False	NA	NA	NA	9675080	9652820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9653879_9656546_9656654_9659378_9659468_9660719_9660875_9675014
transcript_45498.known	chr19	-	583	5	FSM	ENSG00000171466.10	ENST00000587392.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.80073525436772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAAATTTAATCCATG	-9673631	True	NA	NA	False	NA	NA	NA	9675052	9653707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9653882_9658008_9658136_9659378_9659468_9660719_9660875_9675014
transcript_455.known	chr1	-	5948	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_8	21.1538264860048	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTGTTTTCTTCCTT	-1692697	False	NA	-10	True	AATAAA	-13	NA	1692728	1661478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_45500.known	chr19	+	2413	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	20.6074420214316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620083	True	NA	NA	False	NA	NA	NA	9621486	9635446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
transcript_45502.known	chr19	+	2337	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	0	-1	0	multi-exon	FALSE	canonical	3	58	junction_1	13.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620082	True	NA	NA	False	NA	NA	NA	9621485	9635446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9632227_9632418_9633459
transcript_45506.known	chr19	-	683	6	FSM	ENSG00000196605.7	ENST00000589412.5	683	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	10.8921990433521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCAACCAGTTTCCAA	-9785658	False	NA	-76	True	AAGAAA	-45	NA	9785996	9758546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9758765_9759859_9759943_9762081_9762166_9763281_9763409_9764935_9765036_9785925
transcript_45509.known	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.41063228481487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	-9768538	True	NA	NA	False	NA	NA	NA	9768617	9757474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_45514.known	chr19	-	482	5	FSM	ENSG00000196605.7	ENST00000586814.5	482	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	6.41774882649672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAACTGTATGACTCT	-9785751	False	NA	NA	False	NA	NA	NA	9786089	9758748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9758765_9762081_9762169_9763281_9763409_9764935_9765036_9785937
transcript_45515.known	chr19	-	650	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	-9792842	True	NA	-1	True	AATAAA	-22	NA	9793180	9787407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9787811_9792933
transcript_45518.known	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.562405977797	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9818192	True	NA	0	True	ATTAAA	-29	NA	9819079	9810266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
transcript_45519.known	chr19	-	879	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	14.0554457615387	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTCAGCTATCTGCAG	-9818192	True	NA	NA	False	NA	NA	NA	9819079	9811281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
transcript_45520.known	chr19	-	777	4	FSM	ENSG00000127452.9	ENST00000590808.1	777	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	151.400132100339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGACAGGGCTGGATGCTG	-9816284	True	NA	NA	False	NA	NA	NA	9818816	9811307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9814137_9814343_9818544_9818618_9818727
transcript_45522.known	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-9818192	True	NA	-3	True	ATTAAA	-26	NA	9819079	9810269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818544_9818618_9818727
transcript_45523.known	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-9818189	True	NA	-4	True	ATTAAA	-25	NA	9819076	9810270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818544_9818618_9818753
transcript_45524.known	chr19	-	544	2	FSM	ENSG00000127452.9	ENST00000586469.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCCGACCTGAGCAT	-9818216	True	NA	NA	False	NA	NA	NA	9819103	9811549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818727
transcript_45525.known	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9816297	True	NA	0	True	ATTAAA	-29	NA	9818829	9810266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818544
transcript_45531.known	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	510.830390149216	5856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787971	True	NA	22	True	AATAAA	-14	NA	9827917	9830115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_45534.known	chr19	+	513	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	1840.77706078167	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787945	True	NA	22	True	AATAAA	-14	NA	9827891	9830115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_45536.known	chr19	+	320	4	FSM	ENSG00000198258.11	ENST00000593087.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2032.04532976561	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	9787968	True	NA	20	True	AATAAA	-12	NA	9827914	9830113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828390_9828836_9828875_9829964
transcript_45537.known	chr19	+	1450	4	FSM	ENSG00000198258.11	ENST00000589372.1	1450	4	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	578.370892152163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	9787979	True	NA	-17	True	NA	NA	NA	9827925	9830076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836
transcript_45539.nic	chr19	+	672	4	NIC	ENSG00000198258.11	novel	407	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	3703	junction_1	577.136802577074	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9827839	False	NA	22	True	AATAAA	-14	NA	9827850	9830115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_9827985_9828326_9828676_9828836_9828875_9829964
transcript_45545.known	chr19	+	307	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1841.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787949	True	NA	22	True	AATAAA	-14	NA	9827895	9830115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828394_9829964
transcript_45546.known	chr19	+	573	3	FSM	ENSG00000198258.11	ENST00000588141.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCACTTAGAAAATGGG	9787971	True	NA	NA	False	NA	NA	NA	9827917	9828993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828676_9828836
transcript_45551.known	chr19	+	648	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	721.269843747817	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9815184	True	NA	13	True	ATTAAA	-13	NA	9835340	9849682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_45555.known	chr19	+	536	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	910.249519362686	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCTCGGGGCAGGGC	9815212	False	NA	NA	False	NA	NA	NA	9835368	9849214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
transcript_45556.known	chr19	+	755	5	FSM	ENSG00000127445.14	ENST00000586352.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	926.297839520313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGACCGCCAGATTCTCC	9815189	True	NA	NA	False	NA	NA	NA	9835345	9849399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9838011_9838076_9838435_9838649_9848029_9848141_9849089
transcript_45558.known	chr19	+	1009	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	1813	junction_3	99.9344229426922	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	9815161	True	NA	20	True	ATTAAA	-20	NA	9835317	9849689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
transcript_45560.known	chr19	+	878	3	FSM	ENSG00000127445.14	ENST00000587625.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	52.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTCCTCTTCAGTCC	9815166	True	NA	NA	False	NA	NA	NA	9835322	9848614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9838435_9838649_9848029
transcript_45562.known	chr19	-	1982	6	FSM	ENSG00000105088.9	ENST00000264833.9	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_1	19.6020407100893	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	-9932493	True	NA	-6	True	AATAAA	-20	NA	9936515	9853717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
transcript_45563.known	chr19	-	6207	67	FSM	ENSG00000080573.7	ENST00000264828.4	6207	67	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	3.65050910320469	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	NA	False	NA	-1	True	AATAAA	-14	NA	10010504	9959560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9960558_9960650_9960891_9962818_9962888_9966313_9966427_9966535_9966747_9967346_9967401_9967903_9967940_9968025_9968080_9968384_9968493_9968674_9968729_9969348_9969403_9969574_9969683_9969868_9969923_9970621_9970676_9970974_9971029_9971204_9971259_9972918_9973027_9973569_9973624_9973755_9973810_9973918_9973973_9974170_9974225_9974300_9974409_9976557_9976612_9977228_9977283_9977364_9977473_9977593_9977702_9978573_9978628_9978890_9978981_9979131_9979240_9979363_9979418_9979838_9979893_9979993_9980048_9980647_9980693_9980805_9980860_9981087_9981133_9982064_9982119_9985841_9985896_9986314_9986423_9986552_9986607_9986713_9986759_9989123_9989178_9989321_9989367_9989468_9989523_9991609_9991655_9991787_9991842_9992003_9992049_9992826_9992881_9993022_9993068_9993379_9993434_9993618_9993673_9993752_9993807_9995563_9995618_9996065_9996120_9996205_9996263_9996432_9996517_9996614_9996690_9997370_9997434_9997983_9998026_9998101_9998150_10001523_10001671_10001767_10001882_10003564_10003715_10004040_10004146_10005557_10005715_10005795_10005986_10006072_10006232_10010297
transcript_45564.nnic	chr19	+	670	5	FSM	ENSG00000167798.18	ENST00000688591.1	702	5	22	10	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.78535710713571	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGGACATTTGTCCC	NA	False	NA	NA	False	AATAAA	-21	NA	10071388	10074135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10071527_10072923_10073011_10073089_10073180_10073299_10073436_10073916
transcript_45567.known	chr19	+	1928	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	41.5893432189997	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	10083664	True	NA	11	True	AATAAA	-17	NA	10086316	10093243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_45570.known	chr19	+	1481	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	55.2700236132036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	10083687	True	NA	NA	False	AATACA	-33	NA	10086339	10092927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
transcript_45573.known	chr19	+	2079	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	21.5148527508066	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCGTCTTACCTACCC	10083644	True	NA	20	True	AATAAA	-26	NA	10086296	10093252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_45576.known	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_9	66.6611016961079	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	10091390	True	NA	46	True	NA	NA	NA	10106361	10112012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_45589.known	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_4	121.602796020486	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	-10088965	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_456.known	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_16	60.8659122972653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-1724341	False	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_45600.nic	chr19	-	1851	10	NIC	ENSG00000130811.12	novel	1103	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1902	junction_9	115.769886700587	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTTGGTTCTTTTTGTT	-10088992	True	NA	-9	True	AATAAA	-15	NA	10119926	10115017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_45610.known	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	828.547500147095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-10088974	True	NA	NA	False	NA	NA	NA	10119908	10118369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_45612.known	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_8	69.699067425612	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	10091447	True	NA	2	True	CATAAA	-8	NA	10106418	10111254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_45613.known	chr19	-	5274	41	FSM	ENSG00000130816.17	ENST00000359526.9	5274	41	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_37	131.65442453636	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-10184100	True	NA	47	True	AATAAA	-17	NA	10194953	10133345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_45615.known	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_8	74.1788379526129	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	10235607	True	NA	20	True	AATAAA	-28	NA	10252213	10260055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_45616.known	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_4	56.3856979984775	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	10251681	False	NA	NA	False	NA	NA	NA	10252009	10259125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
transcript_45620.known	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	4.50924975282289	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	10270838	True	NA	11	True	AATAAA	-16	NA	10271119	10286615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
transcript_45621.known	chr19	+	552	3	FSM	ENSG00000105364.14	ENST00000588963.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	28	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGCACATAATAAGTTC	10252140	False	NA	NA	False	AATAAA	-9	NA	10252304	10253029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10252311_10252396_10252464_10252550
transcript_45623.known	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	10286797	True	NA	19	True	AATAAA	-15	NA	10286954	10288520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10287407_10287535_10287839_10287985
transcript_45626.known	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_4	49.5939064357261	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339102	False	522	0	True	AATAAA	-18	NA	10339624	10333775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
transcript_45627.known	chr19	-	2057	6	FSM	ENSG00000076662.10	ENST00000589900.5	2057	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	46.6990363926281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339107	False	NA	0	True	AATAAA	-18	NA	10339629	10333775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335977_10338681_10338949_10339538
transcript_45628.nnic	chr19	-	1785	6	NIC	ENSG00000076662.10	novel	1735	7	NA	NA	-301	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	51.6155015475002	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	NA	False	NA	0	True	AATAAA	-18	NA	10339962	10333775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10334060_10334159_10334409_10334527_10334783_10335670_10335977_10338681_10338949_10339538
transcript_45629.nic	chr19	-	813	5	NIC	ENSG00000267673.6	novel	1012	5	NA	NA	-8	2	intron_retention	FALSE	canonical	3	35	junction_1	147.384700698546	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCATGTTGAGTGTCCT	-10316012	False	NA	-6	True	AATAAA	-15	NA	10316023	10310214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10310606_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_45631.known	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	71.820957944043	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-10312653	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_45636.nic	chr19	-	971	3	ISM	ENSG00000076662.10	ENST00000592439.1	905	5	808	-199	-242	0	3prime_fragment	FALSE	canonical	3	146	junction_1	7	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10334443	False	NA	0	True	AATAAA	-18	NA	10334965	10333775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_10334060_10334159_10334409_10334527
transcript_45637.known	chr19	+	2813	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTTTATGACTATGAT	10333376	False	NA	16	True	AATAAA	-22	NA	10333435	10336248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10333400_10336200
transcript_45642.nnic	chr19	-	969	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	47.7336359394505	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353402	True	NA	-12	True	AATAAA	-16	NA	10353944	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353813
transcript_45643.nnic	chr19	-	889	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	47.7336359394505	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353410	True	NA	-12	True	AATAAA	-16	NA	10353952	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353901
transcript_45645.nic	chr19	-	1065	4	ISM	ENSG00000105397.14	ENST00000527481.2	628	6	1197	-414	-69	0	3prime_fragment	FALSE	canonical	3	61	junction_3	35.6931365951495	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353211	False	86	-12	True	AATAAA	-16	NA	10353325	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925
transcript_45646.nnic	chr19	-	778	4	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	152	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.9789233735463	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353384	True	NA	-12	True	AATAAA	-16	NA	10353926	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10353813
transcript_45647.nnic	chr19	-	695	4	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	57.567351858497	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353389	True	NA	-12	True	AATAAA	-16	NA	10353931	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10353901
transcript_45649.nnic	chr19	-	1124	4	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	147	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	56.1030797332513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353389	True	NA	-12	True	AATAAA	-16	NA	10353931	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10350969_10351051_10351163_10352925_10353099_10353527
transcript_45653.nnic	chr19	-	918	3	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	59	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353182	False	542	-12	True	AATAAA	-16	NA	10353296	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10350969_10351051_10351163_10352925
transcript_45654.nnic	chr19	-	665	3	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	70	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353389	True	NA	-12	True	AATAAA	-16	NA	10353931	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10353813
transcript_45657.nic	chr19	-	693	2	ISM	ENSG00000105397.14	ENST00000530560.5	558	4	2316	-216	-194	1	3prime_fragment	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGATTTTTGGA	NA	False	NA	-11	True	AATAAA	-17	NA	10354297	10350531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_10350969_10354041
transcript_45658.known	chr19	-	767	2	FSM	ENSG00000105397.14	ENST00000530220.1	767	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353142	False	542	-12	True	AATAAA	-16	NA	10353256	10350532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10350969_10352925
transcript_4566.known	chr1	+	1352	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	13.490737563232	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	67683469	True	NA	12	True	AATAAA	-22	NA	67685200	67688334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
transcript_45667.known	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_5	106.673639227892	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-10379778	True	NA	-28	True	AATAAA	-16	NA	10403542	10391132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
transcript_45668.known	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1342	junction_5	50.2449555234708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	-10379766	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
transcript_4567.nic	chr1	+	1084	3	ISM	ENSG00000116717.13	ENST00000370986.9	1352	4	753	1	278	0	3prime_fragment	FALSE	canonical	3	130	junction_1	15	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTATTGTGTGCTCTT	67685901	True	NA	11	True	AATAAA	-21	NA	67685953	67688333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_67686127_67686349_67686588_67687660
transcript_45671.known	chr19	-	2648	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	70.382952481407	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	-10502886	False	NA	-8	True	AATAAA	-24	NA	10502896	10486125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_45673.known	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	166.428843653977	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-10502570	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
transcript_45675.nic	chr19	-	2341	5	NIC	ENSG00000079999.14	novel	2648	6	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	186.245805321892	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-10499797	True	NA	-7	True	AATAAA	-25	NA	10502765	10486124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10486819_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_4568.known	chr1	-	4395	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	24.9042611258038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTCCCCTTTCCCTT	-67831555	True	NA	-16	True	AATAAA	-15	NA	67833467	67701474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
transcript_45680.known	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	25.0843023068656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562632	True	NA	-7	True	AATAAA	-24	NA	10566026	10553084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_45682.known	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.8067955504685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	-10562577	True	NA	NA	False	NA	NA	NA	10565971	10553575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_45684.known	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.566394575821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562603	True	NA	-7	True	AATAAA	-24	NA	10565997	10553084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
transcript_45687.known	chr19	-	1086	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	9	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGGAAGCTTGT	-10569042	False	NA	NA	False	NA	NA	NA	10569059	10566600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10567418_10568512_10568669_10568946
transcript_45691.known	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_6	284.910860353036	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10582126	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
transcript_45692.known	chr19	-	510	3	FSM	ENSG00000129354.12	ENST00000589348.1	510	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	563.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAAGATGAATCTAGC	-10572042	False	NA	-28	True	NA	NA	NA	10577231	10572688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10573089_10574416_10574493_10577197
transcript_45694.known	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_1	105.290226260711	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	10599345	True	NA	12	True	AATAAA	-12	NA	10602509	10644550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_45696.known	chr19	+	3784	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_21	110.033101595438	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618080	True	NA	19	True	AATAAA	-19	NA	10625524	10644557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_45698.known	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	66.3069889230792	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618108	True	NA	19	True	AATAAA	-19	NA	10625552	10644557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_457.known	chr1	-	2419	20	FSM	ENSG00000008128.23	ENST00000358779.9	2419	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	59.9063905044253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-1721917	True	NA	NA	False	NA	NA	NA	1724324	1702880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_45707.nnic	chr19	-	1564	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-35	-4	multi-exon	FALSE	canonical	1	6	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTCTCTCTGGTCCTTT	-10651520	True	NA	-8	True	AATAAA	-17	NA	10653879	10651865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr19_-_10653269_10653718
transcript_45709.known	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	-10651485	True	NA	-4	True	AATAAA	-21	NA	10653844	10651861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10651900_10653800
transcript_4571.nnic	chr1	-	1031	3	NNC	ENSG00000172380.6	novel	4395	4	NA	NA	8	-52398	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATAATGAGCATGCA	-67831547	True	NA	NA	False	AATAAA	-34	NA	67833459	67829535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_67830299_67831818_67831971_67833343
transcript_45710.nic	chr19	+	3520	20	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	537	junction_17	365.452749218497	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGTCTTAGGCCTGGGT	10624881	True	NA	10	True	AATAAA	-15	NA	10654277	10689847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_45717.known	chr19	+	3671	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_13	256.409396369776	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10624931	True	NA	40	True	AATACA	-15	NA	10654327	10685765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_45718.known	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_13	188.114832778861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	10624964	True	NA	-60	True	NA	NA	NA	10654360	10684761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_4572.known	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	3.23207069720567	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-68232299	True	NA	NA	False	NA	NA	NA	68232523	68125359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_45722.nic	chr19	+	3649	18	NIC	ENSG00000129351.17	novel	3035	17	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	305.729814907188	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10654663	False	NA	40	True	AATACA	-15	NA	10654973	10685765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_4573.known	chr1	-	5299	12	FSM	ENSG00000024526.17	ENST00000456315.7	5299	12	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	23.8226921475518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-68491496	True	NA	-9	True	ATTAAA	-17	NA	68497082	68474151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_45730.known	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_17	393.978766811184	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	10624864	True	NA	35	True	AATAAA	-35	NA	10654260	10692417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_45733.nic	chr19	+	1397	11	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	342.923446267531	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	10654663	False	NA	30	True	NA	NA	NA	10654973	10681306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_45741.known	chr19	+	1329	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	46.4234402265616	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	10696619	True	NA	26	True	NA	NA	NA	10701438	10713365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
transcript_45746.known	chr19	+	1571	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_5	40.5322017043239	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	10696610	True	NA	6	True	GGGGCT	-31	NA	10701429	10713345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_45762.nnic	chr19	-	1192	4	NNC	ENSG00000099203.7	novel	1633	4	NA	NA	36	249	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	151.587158646987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCCTGCTGATTGGGG	-10832421	False	3175	0	True	AATAAA	-18	NA	10835596	10832437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10833214_10834933_10835118_10835255_10835354_10835462
transcript_45764.known	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	8.98146239020499	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-10833037	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
transcript_45765.nic	chr19	-	2160	10	NIC	ENSG00000130733.11	novel	2111	10	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	90.3271147237693	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACGTCCGTTGTGACCG	-10925330	True	NA	-9	True	AATAAA	-17	NA	10928668	10922189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10923192_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_45767.known	chr19	-	2111	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_9	34.231239793174	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-10925301	True	NA	-12	True	AATAAA	-14	NA	10928639	10922192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_45768.known	chr19	-	2087	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_9	82.8860589329237	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	-10925343	True	NA	-4	True	AATAAA	-22	NA	10928681	10922184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
transcript_45773.nic	chr19	-	1580	10	NIC	ENSG00000130733.11	novel	2111	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	90.3271147237693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGTTTCCTCATTTATT	-10925330	True	NA	-32	True	AAGAAA	-15	NA	10928668	10922769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10923192_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_45776.nic	chr19	-	1250	10	NIC	ENSG00000130733.11	novel	2111	10	NA	NA	19	63	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	90.3271147237693	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGATTCAGAGAATTTATA	-10925268	True	NA	-4	True	NA	NA	NA	10928606	10923037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10923192_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_45783.known	chr19	+	5173	18	FSM	ENSG00000130164.14	ENST00000558518.6	5173	18	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	34.6482073114352	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAAACTCGATGCAC	11080788	True	NA	19	True	ATTAAA	-18	NA	11089462	11133820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_45784.known	chr19	+	2333	16	FSM	ENSG00000130164.14	ENST00000455727.6	2333	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	86.2519307352337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGGATTTTGGTTTCT	11080788	True	NA	NA	False	NA	NA	NA	11089462	11131484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_45788.known	chr19	-	2315	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	17	junction_1	8.86002257333467	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	-11147778	True	NA	-15	True	AATAAA	-22	NA	11155808	11145493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_45789.known	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.5462171841441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	-11147735	True	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_45792.known	chr19	-	699	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGGCCAAGTGTGGTAC	-11147739	True	NA	NA	False	AATAAA	-13	NA	11155769	11147598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
transcript_45795.nic	chr19	-	497	3	ISM	ENSG00000161888.12	ENST00000585486.1	699	4	-32	352	6	-352	5prime_fragment	FALSE	canonical	3	36	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGCTGGGTAACTTTC	-11147771	True	NA	NA	False	NA	NA	NA	11155801	11147950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_11148118_11149093_11149239_11155616
transcript_45797.known	chr19	-	832	5	FSM	ENSG00000161888.12	ENST00000591396.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5944701737507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGCCTGGTGTGGTG	-11147734	True	NA	-38	True	ATTAAA	-1	NA	11155764	11145922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11146280_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_45798.known	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	5.5937465083788	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	11346260	True	NA	6	True	AATAAA	-21	NA	11346518	11354944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
transcript_45804.known	chr19	-	4240	5	FSM	ENSG00000105514.8	ENST00000222120.8	4240	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	15.4333243340507	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGTGCTTTTATTTC	-11331649	False	8008	-25	True	AAGAAA	-24	NA	11339657	11322067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
transcript_45806.known	chr19	-	628	4	FSM	ENSG00000105518.14	ENST00000591677.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	286.462330275146	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCACCACAGCTGCCAT	-11338297	True	NA	NA	False	NA	NA	NA	11346305	11343063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
transcript_45807.known	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	116.878854660142	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338292	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
transcript_45809.known	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	264.313366206773	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338260	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
transcript_45810.known	chr19	-	688	4	FSM	ENSG00000105518.14	ENST00000587948.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	294.473918860209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	11346406	11342778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346333
transcript_45811.known	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	288.818666678977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338277	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
transcript_45812.known	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	231.799242640887	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-11338240	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
transcript_45813.known	chr19	-	788	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	285.991064351474	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	-11338263	True	NA	-5	True	AATAAA	-14	NA	11346271	11342778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
transcript_45820.known	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	TRUE	canonical	2	18	junction_2	299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338202	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11346126
transcript_45822.known	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	8.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338260	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519
transcript_45823.known	chr19	-	1310	2	FSM	ENSG00000105518.14	ENST00000588321.1	1310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGCATGCTAATAAATG	-11338248	True	NA	-36	True	NA	NA	NA	11346256	11342809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343101_11345237
transcript_45825.known	chr19	-	682	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	0	5	0	-5	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGACGGGGGTCTCA	-11374555	False	434	NA	False	AATATA	-16	NA	11374935	11368122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11368296_11371687_11371872_11374610
transcript_45826.known	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11373451	True	NA	NA	False	NA	NA	NA	11374706	11376951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11374930_11375512
transcript_45828.known	chr19	-	2511	19	FSM	ENSG00000205517.13	ENST00000380456.8	2511	19	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	35.138570486041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	-11417760	True	NA	-5	True	NA	NA	NA	11419314	11394059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_45839.known	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	14.9516226680639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-11383934	True	NA	NA	False	AATAAA	-17	NA	11384314	11377206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_4584.known	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	68.5248130241885	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-68497204	True	NA	-9	True	ATTAAA	-17	NA	68497221	68474151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_45840.known	chr19	-	2133	8	FSM	ENSG00000187266.14	ENST00000588681.5	2133	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	24.3008356285313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTACCATGATTTCT	-11383962	True	NA	NA	False	NA	NA	NA	11384342	11377762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11382846_11383233_11384092
transcript_45843.known	chr19	-	771	3	FSM	ENSG00000205517.13	ENST00000568420.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCCGAGGCAGG	-11417751	True	NA	NA	False	NA	NA	NA	11419305	11416462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11417060_11418670_11418785_11419245
transcript_45845.nic	chr19	-	1528	2	ISM	ENSG00000205517.13	ENST00000568420.1	771	3	-54	-242	-31	-182	intron_retention	FALSE	canonical	3	63	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTACCAGGAGTCATA	-11417805	True	NA	NA	False	NA	NA	NA	11419359	11416220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_11417060_11418670
transcript_45850.nic	chr19	+	2097	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	485	junction_11	145.584373091968	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413564	True	NA	18	True	AATAAA	-19	NA	11435612	11450968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_45851.known	chr19	+	2096	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_11	193.48377792037	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413586	True	NA	18	True	AATAAA	-19	NA	11435634	11450968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_45852.known	chr19	+	2063	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	213.590576234195	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11413586	True	NA	15	True	AATAAA	-16	NA	11435634	11450965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_45860.known	chr19	-	2123	13	FSM	ENSG00000198003.12	ENST00000356392.9	2123	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.118431480507	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11435100	False	NA	-8	True	AATAAA	-15	NA	11435121	11420604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11420948_11421127_11421213_11421676_11421833_11422470_11422628_11422700_11422862_11423876_11424030_11426143_11426267_11426445_11426572_11426682_11426785_11426872_11427041_11430698_11430777_11430898_11431021_11434772
transcript_45867.known	chr19	-	467	3	FSM	ENSG00000198003.12	ENST00000593281.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTGTATCTGGCATC	-11434878	False	NA	NA	False	ATTAAA	-14	NA	11434899	11430558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11430777_11430898_11431021_11434772
transcript_45868.known	chr19	+	1898	17	FSM	ENSG00000130175.10	ENST00000589838.5	1898	17	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_10	142.974853011815	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	11436095	False	NA	-10	True	NA	NA	NA	11436117	11450940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_45872.known	chr19	-	1647	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	34.2755937443921	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525897	True	NA	-12	True	AATAAA	-31	NA	11529134	11505928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_45876.nic	chr19	-	1574	7	FSM	ENSG00000130159.15	ENST00000585318.6	1510	7	-48	-16	-8	0	multi-exon	FALSE	canonical	3	40	junction_6	106.841003364813	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525943	True	NA	-12	True	AATAAA	-31	NA	11529180	11505928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
transcript_45879.known	chr19	-	1501	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	111.038156604936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525900	True	NA	-12	True	AATAAA	-31	NA	11529137	11505928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_4588.nic	chr1	-	2405	11	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-33	3644	-33	-899	5prime_fragment	FALSE	canonical	3	205	junction_4	22.2036033111745	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	-68491529	True	NA	NA	False	ATTAAA	-37	NA	68497115	68477795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_45881.known	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	122.879778645634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	-11525935	True	NA	-85	True	NA	NA	NA	11529172	11506001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
transcript_45882.known	chr19	-	1286	6	FSM	ENSG00000130159.15	ENST00000592312.5	1286	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	116.741766304952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCACCCGGGAGCT	-11525887	True	NA	NA	False	NA	NA	NA	11529124	11506300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11529061
transcript_45884.known	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	7.85281265959316	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	11537888	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_45885.nic	chr19	+	1505	7	NIC	ENSG00000130176.8	novel	565	5	NA	NA	-18	0	intron_retention	FALSE	canonical	3	15	junction_1	22.6672794034828	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	11539697	True	NA	16	True	AATAAA	-16	NA	11539875	11550323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_11540022_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_45886.known	chr19	+	580	3	FSM	ENSG00000130176.8	ENST00000588468.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCAGTGACATGATCTC	11537890	True	NA	NA	False	NA	NA	NA	11538852	11542241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11538991_11541075_11541198_11541921
transcript_45889.nnic	chr19	-	1103	5	NIC	ENSG00000130165.10	novel	1172	5	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	337.25880270202	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTGTCCGTGATG	-11555339	True	NA	-17	True	AATAAA	-14	NA	11559244	11553046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_11553811_11554010_11554082_11554231_11554366_11555173_11555254_11559190
transcript_45894.known	chr19	-	743	4	FSM	ENSG00000130165.10	ENST00000589171.5	743	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	342.477574286097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTGATCTCACTTGGC	-11555240	False	NA	NA	False	NA	NA	NA	11559145	11553456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11553816_11554010_11554082_11554231_11554366_11558966
transcript_45895.known	chr19	-	1019	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_3	74.253320165199	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	-11555331	True	NA	-13	True	AATAAA	-18	NA	11559236	11553042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
transcript_45899.known	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	12.0508183216835	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578335	True	NA	0	True	AATAAA	-22	NA	11578985	11574659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
transcript_45900.nic	chr19	-	1647	6	ISM	ENSG00000102575.13	ENST00000218758.9	1630	7	169	0	107	0	3prime_fragment	FALSE	canonical	3	13	junction_5	10.1074230147946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578166	False	NA	0	True	AATAAA	-22	NA	11578816	11574659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584
transcript_45901.known	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	11.1247471881387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	-11578336	True	NA	-31	True	NA	NA	NA	11578986	11574690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
transcript_45902.known	chr19	+	591	5	FSM	ENSG00000198551.10	ENST00000587939.5	591	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.7149302825218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACAAGAAAACTCCTGG	11594986	True	NA	NA	False	AAGAAA	-27	NA	11597461	11616773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11597631_11604209_11604365_11614526_11614654_11614826_11614888_11616694
transcript_45904.known	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	6.18241233033047	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	11595007	True	NA	39	True	CATAAA	-23	NA	11597482	11619161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
transcript_45906.nic	chr19	+	984	4	ISM	ENSG00000197332.9	ENST00000666937.1	923	5	-23	26212	-23	-26212	5prime_fragment	FALSE	canonical	3	9	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGAGAGAAGCCCTATG	11639088	True	NA	NA	False	ATTAAA	-18	NA	11639730	11652282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_11639897_11648357_11648485_11650356_11650418_11651652
transcript_45907.known	chr19	-	2396	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.69967317119759	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCTTTTGTTTTGTG	-11738506	True	NA	-3	True	ATTAAA	-18	NA	11738946	11721264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
transcript_45908.known	chr19	-	698	2	FSM	ENSG00000197933.13	ENST00000586121.1	698	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATAAATGTACACAATGT	-11738442	True	NA	NA	False	NA	NA	NA	11738882	11722710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11723343_11738816
transcript_45909.known	chr19	+	512	3	FSM	ENSG00000177599.13	ENST00000492230.1	512	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGTATAATACTTTT	11798434	True	NA	NA	False	TATAAA	-16	NA	11798587	11809622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11798728_11804541_11804668_11809376
transcript_45910.known	chr19	+	920	4	FSM	ENSG00000171295.13	ENST00000427505.5	920	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.0184900284226	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCGTAGACATGAAAG	11813331	False	NA	NA	False	NA	NA	NA	11814343	11831983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11814451_11830273_11830410_11830616_11830678_11831367
transcript_45912.known	chr19	+	2574	4	FSM	ENSG00000171291.9	ENST00000682736.1	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.09901951359278	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAATGTTACATTGTT	11848180	True	NA	NA	False	AATAAA	-30	NA	11848725	11869486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11848931_11866204_11866332_11866536_11866598_11867305
transcript_45914.known	chr19	+	2441	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	11885017	True	NA	NA	False	NA	NA	NA	11887781	11906696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
transcript_45916.known	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8012344973464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	11885053	True	NA	NA	False	NA	NA	NA	11887817	11904902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
transcript_45917.known	chr19	+	2843	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	8.17856276425687	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	11924053	True	NA	23	True	AATAAA	-25	NA	11925106	11950763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
transcript_45918.known	chr19	+	2862	4	FSM	ENSG00000197054.12	ENST00000358987.8	2862	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAAATACAGCCTTTT	11964803	True	NA	NA	False	AATAAA	-19	NA	11965039	11980617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11965212_11977037_11977165_11977370_11977432_11978115
transcript_45928.nnic	chr19	+	811	4	NNC	ENSG00000219665.8	novel	622	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	50.4667107001129	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985436	True	NA	4	True	AATAAA	-20	NA	11987608	12003811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_11987824_12001129_12001257_12001773_12001823_12003391
transcript_45929.known	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	52.332271751441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	11985594	True	NA	NA	False	NA	NA	NA	11987766	12003595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
transcript_45930.known	chr19	+	6588	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCCAAGTTATTGG	12063200	True	NA	11	True	ATTAAA	-22	NA	12064730	12081565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
transcript_45931.known	chr19	+	1994	4	FSM	ENSG00000214189.9	ENST00000430298.7	1994	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	33.9411254969543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAATGTAAACAGTGT	12088274	False	NA	NA	False	NA	NA	NA	12092467	12113048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12092471_12110304_12110432_12110633_12110695_12111245
transcript_45933.known	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	-12051768	True	NA	NA	False	NA	NA	NA	12052961	12043804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
transcript_45938.known	chr19	-	3004	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	9.03081145609604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATGTTTGCAATT	-12139189	True	NA	NA	False	ATTAAA	-31	NA	12140350	12131349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
transcript_45939.known	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8.17856276425687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	-12139154	True	NA	NA	False	GATAAA	-30	NA	12140315	12133667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
transcript_4594.known	chr1	+	1299	2	FSM	ENSG00000285407.1	ENST00000646995.1	1299	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCTCTCTCTTTTTTT	68881502	False	NA	NA	False	NA	NA	NA	68881576	68943452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_68882004_68942580
transcript_45943.nnic	chr19	-	1046	4	NIC	ENSG00000257591.6	novel	695	4	NA	NA	-32	0	intron_retention	FALSE	canonical	3	19	junction_1	11.8602979164381	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTCTTTTAGATTA	-12154207	True	NA	-6	True	AATAAA	-15	NA	12156766	12142089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12142737_12147394_12147456_12147675_12147803_12156555
transcript_45945.known	chr19	+	622	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	1.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985498	True	NA	4	True	AATAAA	-20	NA	11987670	12003811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11987824_12001773_12001823_12003391
transcript_45947.nnic	chr19	+	525	3	NNC	ENSG00000219665.8	novel	622	3	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11987558	False	NA	4	True	AATAAA	-20	NA	11987579	12003811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_11987824_12001773_12001823_12003579
transcript_45948.known	chr19	+	516	3	FSM	ENSG00000219665.8	ENST00000495324.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAACCATGTGGTAAAG	11985483	True	NA	NA	False	CATAAA	-17	NA	11987655	12018470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11987824_12001773_12001823_12018171
transcript_45950.nic	chr19	+	886	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-11	125	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAGTATCATGCCTGT	12088058	True	NA	NA	False	AATACA	-18	NA	12092251	12111785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_45951.nic	chr19	+	2512	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-11	363	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATATCTTCTGTGGA	12088058	True	NA	8	True	AATAAA	-16	NA	12092251	12113411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_45952.nic	chr19	+	3494	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-11	1345	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACTTTTTTATTTCAGA	12088058	True	NA	4	True	ATTAAA	-13	NA	12092251	12114393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_45954.nic	chr19	-	452	3	ISM	ENSG00000257446.4	ENST00000547628.2	1756	4	-11	2473	-11	-2473	5prime_fragment	FALSE	canonical	3	15	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTCCAATGTATTTAT	-12051779	True	NA	NA	False	AAAAAG	-21	NA	12052972	12046277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_12046429_12046633_12046761_12052798
transcript_45955.nic	chr19	+	373	2	ISM	ENSG00000219665.8	ENST00000489336.5	622	3	-91	1909	-37	-1693	5prime_fragment	FALSE	canonical	3	123	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCGCGGTGGCTCAC	11987558	False	NA	NA	False	TTTAAA	-13	NA	11987579	12001902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_11987824_12001773
transcript_45956.known	chr19	+	1257	3	FSM	ENSG00000219665.8	ENST00000406892.6	1257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGCTCTGTGATTTCA	11985444	True	NA	NA	False	ATTAAA	-15	NA	11987616	12027194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11987824_12001773_12001823_12026193
transcript_45957.known	chr19	-	2651	8	FSM	ENSG00000213297.8	ENST00000430024.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.1377945692616	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCACTGATGCCCAA	-12154172	True	NA	-12	True	AATAAA	-16	NA	12156731	12132116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179_12140326_12142640_12142716_12147394_12147456_12147675_12147803_12156555
transcript_45958.known	chr19	-	2405	6	FSM	ENSG00000197647.13	ENST00000548669.2	2405	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.17823512446701	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-12035447	True	NA	-4	True	AATAAA	-29	NA	12035696	12014715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12030139_12030199_12034827_12034875_12035536
transcript_45959.known	chr19	+	3601	4	FSM	ENSG00000196646.12	ENST00000343979.6	3601	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTCATGGATTGTG	12162250	True	NA	2	True	AATAAA	-14	NA	12163095	12189871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12163207_12185784_12185912_12186113_12186175_12186569
transcript_4596.known	chr1	-	2843	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_10	38.9408892700572	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	-70199756	True	NA	NA	False	AATAAA	-23	NA	70205579	70144804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
transcript_45962.known	chr19	+	478	3	FSM	ENSG00000196646.12	ENST00000439995.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAACACATGAGATAATTCA	12162218	True	NA	NA	False	NA	NA	NA	12163063	12186843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12163207_12186113_12186175_12186569
transcript_45966.known	chr19	-	2780	5	FSM	ENSG00000197857.15	ENST00000356109.10	2780	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.9171656597168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	-12294112	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12293231_12293376_12294691
transcript_45969.known	chr19	-	2636	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	5.73488351136175	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	-12294112	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
transcript_45972.nic	chr19	-	1483	5	NIC	ENSG00000188868.14	novel	958	5	NA	NA	-11	674	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	8.44097150806707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAAAGCCTTTCATAA	-12333063	True	NA	NA	False	AATAAA	-33	NA	12333731	12318504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12319312_12319429_12319666_12321271_12321333_12322584_12322712_12333479
transcript_45973.known	chr19	-	958	5	FSM	ENSG00000188868.14	ENST00000595977.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.44204936336256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACATGTAAACAGTGT	-12333052	True	NA	NA	False	NA	NA	NA	12333720	12319186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12319312_12319429_12319834_12321271_12321333_12322584_12322712_12333479
transcript_45975.known	chr19	-	2699	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	3.29983164553722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAAGACATA	-12332965	True	NA	NA	False	AAAACA	-33	NA	12333633	12317476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
transcript_45976.nic	chr19	-	2293	4	NIC	ENSG00000198342.10	novel	6274	6	NA	NA	-10	208	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.12825877028341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGTGTTGTAAAAGCT	-12365311	True	NA	-24	True	AATAAA	-19	NA	12365693	12349374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12351319_12352009_12352071_12352987_12353115_12365532
transcript_45977.known	chr19	-	1906	3	FSM	ENSG00000198342.10	ENST00000438182.5	1906	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCCCCTAACCATATG	-12365259	True	NA	NA	False	NA	NA	NA	12365641	12349582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12351319_12352009_12352071_12365532
transcript_45978.known	chr19	+	704	5	FSM	ENSG00000173875.14	ENST00000598225.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3513202428783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTCACACTGGAGAAAA	12607495	True	NA	NA	False	NA	NA	NA	12610919	12627982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12611083_12612225_12612317_12623699_12623827_12624649_12624711_12627720
transcript_45979.known	chr19	+	576	5	FSM	ENSG00000173875.14	ENST00000597691.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	27.1569512280005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGCCGGAGTAAAACC	12607495	True	NA	NA	False	NA	NA	NA	12610919	12627805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12611083_12612225_12612366_12623699_12623827_12624649_12624711_12627720
transcript_45980.known	chr19	-	6108	5	FSM	ENSG00000188033.10	ENST00000311437.11	6108	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	1.6393596310755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGAGTTTTTCAT	-12610052	True	NA	-1	True	ATTAAA	-23	NA	12610813	12576099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12610563
transcript_45982.known	chr19	+	6465	4	FSM	ENSG00000173875.14	ENST00000343325.9	6465	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	4.98887651569859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATGGGAGTTTGTT	12607495	True	NA	NA	False	AGTAAA	-21	NA	12610919	12633834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12611083_12623699_12623827_12624649_12624711_12627720
transcript_45984.known	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.28653526310404	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-12400556	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
transcript_45985.known	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	2.05480466765633	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	-12440422	True	NA	-1	True	ATTAAA	-22	NA	12441021	12429705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
transcript_45986.known	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-12549624	True	NA	-14	True	ATTAAA	-17	NA	12551482	12525372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
transcript_45988.known	chr19	-	3185	24	FSM	ENSG00000104774.13	ENST00000456935.7	3185	24	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_17	17.9150484314851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCTCTGTGACTGAGTG	-12645777	False	20965	-19	True	ATTAAA	-20	NA	12666742	12646511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658511_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_45991.known	chr19	+	1425	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	59.5957213229272	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	12666006	True	NA	21	True	AATAAA	-33	NA	12666813	12675831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_45993.known	chr19	+	1450	11	FSM	ENSG00000123154.12	ENST00000418543.8	1450	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	43.7236777959037	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCAGTCCTCGTTCTT	12665999	True	NA	22	True	AATAAA	-34	NA	12666806	12675832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670098_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_45998.known	chr19	+	1480	10	FSM	ENSG00000123154.12	ENST00000546754.5	1480	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	60.7510605506166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATAGAAGAGGGGG	12665994	True	NA	-19	True	AAAAAG	-25	NA	12666801	12675791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12666993_12668507_12668628_12669754_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_46.known	ERCC-00126	+	1111	1	FSM	ERCC-00126A	DQ459427	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00126_+_0_1100
transcript_46006.nic	chr19	+	1395	9	ISM	ENSG00000123154.12	ENST00000418543.8	1450	11	2697	0	-49	0	3prime_fragment	FALSE	canonical	3	150	junction_2	20.6030185895174	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCAGTCCTCGTTCTT	12668696	False	NA	22	True	AATAAA	-34	NA	12669503	12675832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_12669894_12669976_12670098_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_46012.known	chr19	-	1172	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	141.151016202506	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	-12674209	False	NA	-28	True	NA	NA	NA	12681206	12675742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
transcript_46014.known	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	53.1458782503404	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12674883	True	NA	-2	True	NA	NA	NA	12681880	12675716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_46022.known	chr19	-	1090	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	140.397249813171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	-12674774	False	NA	-7	True	NA	NA	NA	12681771	12675721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_46026.known	chr19	-	1176	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	138.044358443071	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGCTACGTCTCTAGAA	-12674863	True	NA	-47	True	NA	NA	NA	12681860	12675761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_46046.known	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	890.462177124267	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	-12648438	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
transcript_46047.known	chr19	-	554	3	FSM	ENSG00000104774.13	ENST00000493218.5	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGCTCTGTGACTGAGT	-12647601	False	NA	-20	True	ATTAAA	-19	NA	12647673	12646512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12646733_12647232_12647336_12647442
transcript_46049.known	chr19	-	627	3	FSM	ENSG00000105583.11	ENST00000598732.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	1669	junction_2	86	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCATGTTTCTAGGGG	-12648436	True	NA	-92	True	NA	NA	NA	12669401	12668144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12668618_12669127_12669234_12669353
transcript_46051.known	chr19	-	553	5	FSM	ENSG00000095059.17	ENST00000598246.5	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	189.910505238652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12672523	False	NA	-2	True	NA	NA	NA	12679520	12675716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676079_12677107_12677212_12677290_12677397_12679456
transcript_46052.known	chr19	-	574	2	FSM	ENSG00000104774.13	ENST00000469423.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTCTGTGACTGAGTGT	-12647490	True	NA	-18	True	ATTAAA	-21	NA	12647584	12646510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12646733_12647232
transcript_46053.known	chr19	-	464	4	FSM	ENSG00000095059.17	ENST00000600864.5	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	212.512483293466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	-12672543	False	NA	-7	True	NA	NA	NA	12679540	12675721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676079_12677290_12677397_12679456
transcript_46055.known	chr19	-	1727	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	12.6178396147363	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	-12695791	True	NA	-5	True	AATAAA	-22	NA	12696631	12688915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
transcript_46056.nic	chr19	-	1593	9	NIC	ENSG00000132004.13	novel	1727	10	NA	NA	-6	0	intron_retention	FALSE	canonical	2	10	junction_8	42.5600678453407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	-12695797	True	NA	-5	True	AATAAA	-22	NA	12696637	12688915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12696172
transcript_46060.known	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_2	471	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12712730	True	NA	-1	True	AGTAAA	-21	NA	12734684	12730639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12731069_12731343_12731422_12734312
transcript_46061.known	chr19	+	1275	7	FSM	ENSG00000198356.12	ENST00000357332.8	1275	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	431.50617994802	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	12727146	True	NA	15	True	AATAAA	-16	NA	12737496	12748323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_46074.known	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	10.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-12768534	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12774742_12774811_12774898_12775404
transcript_46077.known	chr19	-	1114	2	FSM	ENSG00000095066.12	ENST00000592808.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGGAATAGCAGATGT	-12768562	True	NA	NA	False	NA	NA	NA	12775572	12773951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12774898_12775404
transcript_46079.known	chr19	-	925	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	7636	junction_5	469.592589379347	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	-12745587	True	NA	-10	True	AATAAA	-17	NA	12801800	12796822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_46080.known	chr19	-	784	5	FSM	ENSG00000167815.12	ENST00000334482.9	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	3406.95160664193	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGCTCTG	-12745574	True	NA	-7	True	AATAAA	-20	NA	12801787	12796819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12797167_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_46088.known	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	827	junction_3	67.5398597352795	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12793372	True	NA	17	True	AATAGA	-20	NA	12806583	12813640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_461.nic	chr1	-	1033	7	ISM	ENSG00000008128.23	ENST00000358779.9	2419	20	-235	6637	-202	-4910	5prime_fragment	FALSE	canonical	3	37	junction_3	24.7885502242915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-1724543	False	NA	NA	False	NA	NA	NA	1724559	1709517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_46101.known	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_3	86.6833317310773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	12793465	True	NA	NA	False	AATAAA	-35	NA	12806676	12807976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
transcript_46104.known	chr19	+	1245	6	FSM	ENSG00000104889.7	ENST00000593017.2	1245	6	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	44.6569143582492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACACGTAGGGGATGT	12793472	False	NA	8	True	ATTAAA	-13	NA	12806683	12813525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12807080_12807205_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_46105.known	chr19	+	1496	13	FSM	ENSG00000105613.10	ENST00000591495.5	1496	13	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	15.4371485565034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGTCATTGATTTG	12833489	True	NA	-42	True	NA	NA	NA	12833950	12858864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12834007_12838268_12838301_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
transcript_46106.nnic	chr19	+	1336	12	NNC	ENSG00000105613.10	novel	4853	26	NA	NA	-6	-539	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	17.2908995315909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTGGTGTGGTCTC	12837618	True	NA	NA	False	ATTAAA	-20	NA	12838508	12858325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12855724_12855768_12858173
transcript_46109.known	chr19	-	1328	7	FSM	ENSG00000132026.15	ENST00000322912.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.42261628933256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12835332	False	NA	-4	True	AATAAA	-17	NA	12835416	12825481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_46111.known	chr19	-	1023	6	FSM	ENSG00000132026.15	ENST00000674343.2	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.18747549010185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12834495	False	84	-4	True	AATAAA	-17	NA	12834579	12825481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834488
transcript_46114.known	chr19	+	739	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGGAGGAGCGGCGA	NA	False	NA	-83	True	NA	NA	NA	12825710	12832983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12825913_12826784_12826893_12832554
transcript_46116.nnic	chr19	+	708	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	302	108	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCGTGAGGGAGGGG	12825894	False	NA	25	True	TATAAA	-28	NA	12826012	12833091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_46117.nnic	chr19	+	817	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	302	217	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGCGTCTCCTGTGAA	12825894	False	NA	NA	False	NA	NA	NA	12826012	12833200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_46118.known	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_2	21.5925913220252	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-12877000	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
transcript_46122.known	chr19	+	1852	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	57.0316716417109	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	12885553	True	NA	38	True	NA	NA	NA	12891159	12899999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_46124.nnic	chr19	+	1601	12	NNC	ENSG00000105607.13	novel	1852	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_11	130.69003136246	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAAGGTGTCAGGCCGGT	12885542	True	NA	8	True	AATAAA	-16	NA	12891148	12899969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899699
transcript_46129.nic	chr19	+	2141	11	NIC	ENSG00000105607.13	novel	1852	12	NA	NA	-11	0	intron_retention	FALSE	canonical	3	274	junction_1	59.501344522624	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAAGGTGTCAGGCCGGT	12885542	True	NA	8	True	AATAAA	-16	NA	12891148	12899969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_46133.known	chr19	+	791	6	FSM	ENSG00000105607.13	ENST00000587832.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	66.3403346388907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCCAAAGTTTAAAGT	12885573	True	NA	NA	False	NA	NA	NA	12891179	12893882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482
transcript_46134.known	chr19	-	1248	6	FSM	ENSG00000161860.8	ENST00000293695.8	1248	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_5	3.9293765408777	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGATAGGGTCTCACT	-12918867	True	NA	NA	False	NA	NA	NA	12919293	12898785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12899386_12900003_12900121_12900459_12900649_12904491_12904667_12918221_12918338_12919242
transcript_46135.known	chr19	+	1051	5	FSM	ENSG00000105607.13	ENST00000590627.5	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	73.4383244634571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGTGACCACCGTC	12885573	True	NA	NA	False	NA	NA	NA	12891179	12893834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482
transcript_46136.known	chr19	+	1867	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.4789486095367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	12885553	True	NA	-15	True	NA	NA	NA	12891159	12899946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_46138.known	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_9	81.1570836231947	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	-12924180	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_46143.known	chr19	-	1831	12	FSM	ENSG00000179115.11	ENST00000588965.5	1831	12	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_8	73.1807453337509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGCCCTGAGGAGACCT	-12924165	True	NA	-80	True	NA	NA	NA	12933696	12922539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_4615.known	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	286.250570111029	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70199760	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_46158.known	chr19	+	1678	10	FSM	ENSG00000179218.15	ENST00000586967.2	1678	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	1047.59471712969	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734575	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712_12943989_12944211
transcript_46163.known	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2768	junction_3	281.249194443291	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734575	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_46171.known	chr19	+	1661	8	FSM	ENSG00000179218.15	ENST00000588454.6	1661	8	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	1115.8936749877	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734611	True	NA	25	True	ATTAAA	-17	NA	12938644	12944489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12938771_12939133_12939236_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_46177.known	chr19	+	1772	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_6	295.16510210389	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	12933556	True	NA	14	True	AATAAA	-14	NA	12945861	12953642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_4618.known	chr1	+	2385	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	271.299598639995	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	70199718	True	NA	NA	False	NA	NA	NA	70205681	70251617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_46180.known	chr19	+	1736	9	FSM	ENSG00000179262.10	ENST00000316856.7	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_6	211.815330830891	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTTTTAAAAACTAG	12933570	True	NA	-5	True	GATAAA	-13	NA	12945875	12953623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_46182.known	chr19	+	1691	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	473.52017842432	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	12945875	True	NA	-15	True	GATAAA	-3	NA	12945893	12953613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_46188.known	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-12923277	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12954527_12956862
transcript_46192.nic	chr19	-	2041	17	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	117.322988343078	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111432	True	NA	-11	True	AATAAA	-20	NA	13116744	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_46193.known	chr19	-	2128	17	FSM	ENSG00000104907.13	ENST00000357720.9	2128	17	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_9	67.958627119741	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111428	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_462.known	chr1	-	2078	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	60.6071136272156	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCCTGCTTTGTTT	-1745868	False	NA	NA	False	AATAAA	-22	NA	1745919	1724837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
transcript_46201.nic	chr19	-	2013	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_10	120.717742413174	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111439	True	NA	-11	True	AATAAA	-20	NA	13116751	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_46204.nic	chr19	-	2052	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_8	102.513001885398	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111439	True	NA	-11	True	AATAAA	-20	NA	13116751	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_46208.known	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	120.313959659255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111428	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_46209.nic	chr19	-	2229	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	272	junction_8	66.8666999002908	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111439	True	NA	-11	True	AATAAA	-20	NA	13116751	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_46213.nic	chr19	-	2216	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-2	0	intron_retention	TRUE	canonical	3	44	junction_10	115.385999535857	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111439	True	NA	-11	True	AATAAA	-20	NA	13116751	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_4622.nic	chr1	+	2723	13	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	290.745832109231	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209044	True	NA	10	True	AATAAA	-14	NA	70221350	70252001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_70221401_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_46244.known	chr19	-	582	4	FSM	ENSG00000104907.13	ENST00000591717.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	198.236110624567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCACCAGAGGGTGTCG	-13111437	True	NA	NA	False	NA	NA	NA	13116749	13113000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13113012_13115278_13115467_13116145_13116432_13116652
transcript_46245.known	chr19	-	2263	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_9	69.9844427156652	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTGTGGTTTGTGTAT	-13111337	True	NA	-6	True	AATAAA	-25	NA	13116649	13104901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_46246.known	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	105.887816068879	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111345	True	NA	-11	True	AATAAA	-20	NA	13116657	13104906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_46247.known	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	119.42457700087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	-13111413	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
transcript_46255.known	chr19	-	1099	8	FSM	ENSG00000104915.15	ENST00000242770.9	1099	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.527906325858	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13149984	False	NA	-3	True	AATAAA	-19	NA	13150178	13144061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13144487_13144576_13144672_13144767_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_46257.known	chr19	-	1128	7	FSM	ENSG00000104915.15	ENST00000343587.9	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	145.574055228106	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-13144642	True	NA	1	True	AATAAA	-23	NA	13150346	13144057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145386_13149572_13149594_13149727_13149898_13150138
transcript_46259.known	chr19	-	1241	7	FSM	ENSG00000104915.15	ENST00000589083.5	1241	7	0	0	0	0	multi-exon	FALSE	canonical	2	253	junction_5	68.8597608670453	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13144522	True	NA	-3	True	AATAAA	-19	NA	13150226	13144061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_46265.known	chr19	+	1922	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	40.3286498658212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTGTTAGATGGAC	13731313	True	NA	15	True	ATTAAA	-21	NA	13731759	13763296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_46271.known	chr19	+	1673	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	21.8428732338745	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13746143	True	NA	8	True	ATTAAA	-14	NA	13747894	13763289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_46275.known	chr19	+	1783	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.4409718765899	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	13746112	True	NA	-2	True	ATTAAA	-4	NA	13747863	13763279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_46279.known	chr19	+	897	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	2783	junction_1	52.5	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGGTACTACCTGGTT	13757621	True	NA	NA	False	ATTAAA	-19	NA	13774455	13778773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13774575_13774651_13774708_13778051
transcript_46280.known	chr19	+	504	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCAGTCCTGTGT	13757644	True	NA	14	True	AATAAA	-14	NA	13774478	13778459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13774575_13778051
transcript_46281.known	chr19	+	491	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	13774567	True	NA	17	True	AATAAA	-17	NA	13774823	13778462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13774904_13778051
transcript_46286.known	chr19	+	2278	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	327	junction_7	37.0100399291267	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13944870	True	NA	22	True	AATAAA	-22	NA	13952491	13961449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_46293.nic	chr19	+	1174	3	ISM	ENSG00000132017.11	ENST00000254337.11	2261	13	-38	6022	-38	990	5prime_fragment	FALSE	canonical	3	414	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTACCATTTTTATGGT	13944849	True	NA	NA	False	AAAAAG	-6	NA	13952470	13955427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_13952645_13954339_13954438_13954525
transcript_46295.known	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	12.4396769302976	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	14029932	True	NA	10	True	AATAAA	-21	NA	14031761	14053218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_46298.known	chr19	-	2383	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.57171971404746	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	-14055800	True	NA	-9	True	AATAAA	-17	NA	14057599	14053366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
transcript_46301.known	chr19	-	2196	5	FSM	ENSG00000141858.12	ENST00000533683.7	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	7.56224173112709	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAGCCACGGAG	-14087052	True	NA	-14	True	AATAAA	-19	NA	14090751	14087850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14089784
transcript_46302.known	chr19	-	746	4	FSM	ENSG00000105011.9	ENST00000590835.5	746	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.700576381386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCCCAGCACGCCG	-14132877	True	NA	NA	False	NA	NA	NA	14136613	14120447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14120666_14121531_14121678_14126121_14126238_14136347
transcript_46303.known	chr19	-	1689	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	14.522013940528	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	-14132853	True	NA	-4	True	ATTAAA	-39	NA	14136589	14119511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
transcript_46305.known	chr19	-	587	3	FSM	ENSG00000105011.9	ENST00000589468.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	114.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTCCTCCCTGAGAA	-14132853	True	NA	NA	False	GGGGCT	-14	NA	14136589	14120497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14120666_14121531_14121709_14136347
transcript_46306.known	chr19	-	765	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGAGCCAGA	-14132838	True	NA	NA	False	NA	NA	NA	14136574	14121286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14121709_14126121_14126238_14136347
transcript_46307.known	chr19	+	686	2	FSM	ENSG00000267169.2	ENST00000588658.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGGCTATATTTGCTG	14136942	True	NA	NA	False	NA	NA	NA	14137187	14155801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14137224_14155151
transcript_46310.known	chr19	+	2751	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.47208342667617	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTCCAGGACACCC	NA	False	NA	NA	False	NA	NA	NA	14381155	14408275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_46325.known	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	53.5148577499744	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	-14405963	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_46337.known	chr19	-	1355	10	FSM	ENSG00000123136.15	ENST00000324340.13	1355	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	347.12718699436	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14405951	True	NA	-21	True	AATAAA	-16	NA	14419329	14408818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_4634.nic	chr1	+	1279	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	1225	-12	-333	5prime_fragment	FALSE	canonical	3	220	junction_1	245.7139706486	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	70199706	True	NA	-6	True	CATAAA	-22	NA	70205669	70250392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364
transcript_46349.known	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	58.5030715005631	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14405959	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_46358.known	chr19	-	1478	10	FSM	ENSG00000123136.15	ENST00000588692.5	1478	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	346.867890317529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGAGAATAAACTTG	-14413209	False	NA	-52	True	NA	NA	NA	14413220	14408849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409982_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012
transcript_46359.known	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_8	170.087293764114	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491755	True	NA	-2	True	CATAAA	-17	NA	14496127	14477761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
transcript_46360.known	chr19	-	1386	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_7	152.550694150221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-14491760	True	NA	NA	False	NA	NA	NA	14496132	14478245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
transcript_46364.known	chr19	-	1483	6	FSM	ENSG00000123159.16	ENST00000393028.5	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	302.425792550834	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGGCTTCGGGGTG	-14491777	True	NA	0	True	CATAAA	-19	NA	14496149	14477759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14496036
transcript_46367.known	chr19	+	1204	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	435.96549143507	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14501125	True	NA	8	True	AATAAA	-21	NA	14529593	14565980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46369.known	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	407.909329181539	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	14501123	True	NA	5	True	AATAAA	-18	NA	14529591	14565977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46373.known	chr19	+	1139	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	91.7154415691394	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14501125	True	NA	8	True	AATAAA	-21	NA	14529593	14565980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_4638.nic	chr1	+	1584	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	-19	2394	-9	-67	multi-exon	FALSE	canonical	3	674	junction_11	129.088284224274	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAAAAGAAGAGAAGAA	70209054	True	NA	12	True	NA	NA	NA	70221360	70250658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_46387.known	chr19	+	1164	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	94.8614474635298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	14501188	True	NA	6	True	AATAAA	-19	NA	14529656	14565978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_4640.nic	chr1	+	2551	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	-19	1427	-9	8	multi-exon	FALSE	canonical	3	674	junction_11	129.088284224274	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATCTCTTGCCCTTATT	70209054	True	NA	NA	False	AAAAAG	-8	NA	70221360	70251625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_4641.nic	chr1	+	2927	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	-19	1051	-9	0	multi-exon	FALSE	canonical	3	674	junction_11	129.088284224274	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209054	True	NA	10	True	AATAAA	-14	NA	70221360	70252001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_46417.known	chr19	-	2208	4	FSM	ENSG00000132002.9	ENST00000598692.2	2208	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.478955692153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAACCTCAGGGGAGCG	-14529304	False	NA	-16	True	ATTAAA	-7	NA	14529322	14514780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529209
transcript_46419.known	chr19	-	2242	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	47	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-14514297	True	NA	-4	True	ATTAAA	-19	NA	14518397	14514768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14516171_14516465_14517047_14518138
transcript_46421.known	chr19	+	584	6	FSM	ENSG00000099797.15	ENST00000599101.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	1452	junction_3	54.8357547590986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCCACAGCTCTCC	14564563	True	NA	-47	True	NA	NA	NA	14564693	14565925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46422.known	chr19	+	720	5	FSM	ENSG00000099797.15	ENST00000593775.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	1452	junction_2	52.4452095047775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	14564567	True	NA	3	True	AATAAA	-16	NA	14564697	14565975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46427.known	chr19	-	529	3	FSM	ENSG00000099795.7	ENST00000593353.5	529	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1527.5	2587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-14538183	True	NA	-4	True	AATAAA	-19	NA	14572062	14566077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14566266_14566764_14566932_14571888
transcript_4643.nic	chr1	+	2540	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	15679	0	-9	0	3prime_fragment	FALSE	canonical	3	467	junction_11	179.91223755804	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	70209054	True	NA	NA	False	NA	NA	NA	70221360	70251617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_46430.nic	chr19	+	1119	7	ISM	ENSG00000160961.12	ENST00000597301.5	1569	11	-39	10987	-2	-6	5prime_fragment	TRUE	canonical	3	48	junction_5	9.24962461700774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCTGTGCATGG	14688716	True	NA	NA	False	NA	NA	NA	14690066	14707256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685
transcript_46431.known	chr19	+	1257	1	FSM	ENSG00000160961.12	ENST00000594592.1	1257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTCTCAGGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	14707993	14709250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14708000_14709200
transcript_46437.nic	chr19	-	2473	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	108.997736979566	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15123362	True	NA	-13	True	AATAAA	-29	NA	15125678	15114986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
transcript_46438.known	chr19	-	2305	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_15	53.8274609800198	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15123470	True	NA	-13	True	AATAAA	-29	NA	15125786	15114986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
transcript_4644.nic	chr1	+	2924	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	15679	-384	-9	0	3prime_fragment	FALSE	canonical	3	467	junction_11	179.91223755804	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209054	True	NA	10	True	AATAAA	-14	NA	70221360	70252001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_46445.nic	chr19	-	2492	15	ISM	ENSG00000105135.16	ENST00000263383.8	2305	16	399	0	-25	0	3prime_fragment	FALSE	canonical	3	417	junction_10	35.2632230228489	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15125377	False	2316	-13	True	AATAAA	-29	NA	15125387	15114986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924
transcript_46446.nic	chr19	-	2136	15	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	129.937583132072	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15125809	True	NA	-13	True	AATAAA	-29	NA	15125819	15114986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15124924_15125070_15125655
transcript_46456.nic	chr19	-	1448	6	ISM	ENSG00000105131.8	ENST00000221730.8	1838	7	491	6	491	0	3prime_fragment	FALSE	canonical	3	194	junction_2	17.0411267233126	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCAGCTGTATTTCA	-15231940	False	NA	-9	True	AATACA	-19	NA	15231957	15226924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775
transcript_46458.nic	chr19	-	1923	10	NIC	ENSG00000141867.19	novel	1821	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	357.594052205625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGCAAAGCCAAGGA	-15320016	False	NA	9	True	AAAAAG	-36	NA	15331916	15256134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268153_15268282_15268904_15269043_15272814_15273134_15331835
transcript_46459.known	chr19	-	1821	9	FSM	ENSG00000141867.19	ENST00000594841.5	1821	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	395.557972205087	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAGAAAAATAATAGCAG	-15320006	False	11900	7	True	AATAAA	-34	NA	15331906	15256098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15331835
transcript_46462.known	chr19	-	3665	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_13	14.9555554578643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTAGTGGAACTGCTT	-15375264	True	NA	NA	False	ATTAAA	-17	NA	15379787	15353384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_46467.nic	chr19	-	919	5	ISM	ENSG00000011243.19	ENST00000594893.5	1453	8	-58	1215	0	-182	5prime_fragment	FALSE	canonical	2	662	junction_2	117.597831612662	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAGGCAGCCTTCC	-15408830	True	NA	NA	False	NA	NA	NA	15419026	15401149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_46468.known	chr19	-	3715	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	74.1124696880714	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTCTGGGTCATTTC	-15375292	True	NA	1	True	AATAAA	-17	NA	15379815	15353520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_46469.known	chr19	+	2609	14	FSM	ENSG00000171954.13	ENST00000269703.8	2609	14	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	2.76281307631815	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTTCATTTATTT	15508387	True	NA	2	True	CATAAA	-19	NA	15508524	15552317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_15508584_15523692_15523800_15525335_15525559_15529708_15529854_15537360_15537415_15537534_15537663_15537871_15537994_15540449_15540718_15543970_15544038_15544149_15544280_15548107_15548242_15549137_15549203_15550673_15550757_15551293
transcript_4647.known	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	45	junction_9	307.845561930004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	70209089	True	NA	-6	True	CATAAA	-22	NA	70221395	70250392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
transcript_46470.known	chr19	-	375	3	FSM	ENSG00000267453.8	ENST00000588182.3	491	3	66	50	33	-50	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGGCTCTGAATCCCC	-15862965	False	NA	NA	False	NA	NA	NA	15862975	15852042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15852250_15854732_15854837_15862911
transcript_46471.known	chr19	+	2474	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	0	0	0	0	multi-exon	FALSE	canonical	3	2686	junction_2	105.607088506677	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	16034689	True	NA	11	True	AATAAA	-16	NA	16076494	16103002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_46474.nnic	chr19	+	2386	8	NIC	ENSG00000167460.17	novel	2491	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_1	1013.20191593235	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	16076093	True	NA	11	True	AATAAA	-16	NA	16077015	16103002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_16077131_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_46475.known	chr19	+	2567	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_6	82.8551723903628	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	16103152	True	NA	16	True	NA	NA	NA	16111888	16134234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
transcript_46476.known	chr19	+	896	5	FSM	ENSG00000105058.12	ENST00000585831.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	532.34311069084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGGGCGCCCTTCCAAG	16175665	True	NA	NA	False	NA	NA	NA	16185432	16191378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16185517_16185623_16185766_16189387_16189512_16190519_16190574_16190886
transcript_46477.known	chr19	+	1463	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_2	40.8765077873452	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	16175642	True	NA	19	True	AATAAA	-21	NA	16185409	16192046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
transcript_46479.known	chr19	+	798	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	518	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAACTATGCGGCCTT	16175655	True	NA	NA	False	NA	NA	NA	16185422	16191448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16185517_16185623_16185766_16190886
transcript_4648.nic	chr1	+	1422	11	ISM	ENSG00000116754.14	ENST00000370949.2	3959	12	-19	2660	-9	-333	5prime_fragment	FALSE	canonical	3	871	junction_2	82.7106401861332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	70209054	True	NA	-6	True	CATAAA	-22	NA	70221360	70250392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364
transcript_46480.known	chr19	+	12859	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	26.5227175352479	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCATTGTTTTCCTTT	16197351	True	NA	NA	False	AATAAA	-23	NA	16197910	16245906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_46483.known	chr19	-	2666	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	37.6890848944546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCCGCAG	-16468956	True	NA	-37	True	AAGAAA	-15	NA	16471976	16361596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_46484.known	chr19	-	420	4	FSM	ENSG00000127527.14	ENST00000602151.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_2	17.326921891156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTATTTTTCTT	-16468923	True	NA	NA	False	TTTAAA	-42	NA	16471943	16440652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16440910_16441891_16441982_16442177_16442220_16471912
transcript_46487.known	chr19	+	3346	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	3.86490620843508	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	16495770	True	NA	4	True	ATTAAA	-17	NA	16496393	16521352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
transcript_46491.known	chr19	-	1473	1	FSM	ENSG00000269044.2	ENST00000598112.2	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTATATGCTGCATT	NA	False	NA	-8	True	AATAAA	-24	NA	16635269	16633796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16633800_16635300
transcript_46492.known	chr19	+	2717	1	FSM	ENSG00000279529.1	ENST00000623966.1	2717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCAGCATTTCTT	16572479	True	NA	NA	False	AATAAA	-14	NA	16572623	16575340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16572600_16575300
transcript_46493.known	chr19	-	1281	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	296.788961216552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	-16651479	True	NA	-20	True	AATAAA	-7	NA	16660130	16630750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_46494.known	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	34.3611335668659	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_46495.known	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	212.5338561265	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_46496.known	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	270.613539018283	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-16651493	True	NA	-39	True	NA	NA	NA	16660144	16646587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_46497.known	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	263.923639524769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-16651491	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_46498.known	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	30.3802567467755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	16659956	True	NA	NA	False	AATAAA	-15	NA	16661138	16690023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
transcript_46499.known	chr19	+	798	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGCCAGTAGCACA	16660059	False	NA	NA	False	NA	NA	NA	16661241	16680937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16661342_16679983_16680141_16680396
transcript_465.nic	chr1	-	413	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-22	16491	11	-206	5prime_fragment	FALSE	canonical	3	63	junction_3	15.8954920234218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAGAAAAATGTAGGC	-1721939	True	NA	6	True	AAAAAG	-23	NA	1724346	1719371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_46501.known	chr19	-	1545	11	FSM	ENSG00000131351.15	ENST00000448593.6	1545	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	73.7054272085849	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	-17075585	True	NA	-31	True	AGTAAA	-18	NA	17075625	17049760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_46504.nnic	chr19	-	1256	10	NIC	ENSG00000131351.15	novel	1545	11	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	85.291801235668	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	-17072023	True	NA	-31	True	AGTAAA	-18	NA	17075475	17049760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_17050177_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_46505.nic	chr19	-	1299	10	NIC	ENSG00000131351.15	novel	1407	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.4043764589971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	-17072011	True	NA	-36	True	AGTAAA	-13	NA	17075463	17049765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17069030_17069087_17073273_17073336_17075393
transcript_46507.known	chr19	+	845	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.4754341304448	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214498	True	NA	9	True	AATAAA	-16	NA	17215356	17219829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_46509.known	chr19	+	637	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.4928309885872	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214531	True	NA	9	True	AATAAA	-16	NA	17215389	17219829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_4651.nic	chr1	+	1065	9	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	6802	-12	-5910	5prime_fragment	FALSE	canonical	3	220	junction_1	286.178593713786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	70199706	True	NA	16	True	AAAACA	-3	NA	70205669	70244815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_46510.known	chr19	+	587	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.3956130731489	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTGAAAATGGCGGAC	17215138	True	NA	NA	False	NA	NA	NA	17215719	17219640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_46514.nic	chr19	+	620	6	ISM	ENSG00000053501.14	ENST00000596136.5	637	7	311	0	-19	0	3prime_fragment	FALSE	canonical	0	0	junction_4	50.2847889525252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214842	False	NA	9	True	AATAAA	-16	NA	17215700	17219829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_46517.known	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	26.8001865665148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	17214529	True	NA	NA	False	NA	NA	NA	17215387	17218826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
transcript_46522.known	chr19	+	1111	6	FSM	ENSG00000099330.9	ENST00000215061.9	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	39.5848455851479	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17224459	True	NA	18	True	AATAAA	-18	NA	17226225	17229219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_46523.known	chr19	+	1201	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	37.9275625370258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	17224476	True	NA	1	True	AATAAA	-1	NA	17226242	17229202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
transcript_46524.known	chr19	+	1044	5	FSM	ENSG00000099330.9	ENST00000597836.5	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	35.6966384972031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTAGGGCCTGCTCTC	17225672	True	NA	-36	True	NA	NA	NA	17226614	17229165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_46528.nic	chr19	+	1607	4	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	153	junction_3	21.7715410570772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224459	True	NA	14	True	AATAAA	-14	NA	17226225	17229215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17227200_17227839_17228006_17228255_17228310_17228802
transcript_46529.nic	chr19	+	1027	4	NIC	ENSG00000099330.9	novel	878	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	41	junction_3	74.1724716829334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17225661	True	NA	18	True	AATAAA	-18	NA	17226603	17229219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17227200_17227839_17228006_17228255_17228310_17229008
transcript_46530.known	chr19	+	842	3	FSM	ENSG00000099330.9	ENST00000596279.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGCCCACCACCGTGCC	17225839	False	NA	NA	False	NA	NA	NA	17226781	17228513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17227200_17227839_17228006_17228255
transcript_46533.known	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	8.1967981553775	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	-17263841	True	NA	-12	True	AATAAA	-28	NA	17264745	17249170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_46543.known	chr19	+	1377	9	FSM	ENSG00000105393.16	ENST00000598188.6	1377	9	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	130.858165106347	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250566	True	NA	16	True	AATAAA	-18	NA	17267442	17279337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_4655.nic	chr1	+	1208	8	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	-35	5990	-9	-5910	5prime_fragment	FALSE	canonical	3	871	junction_2	95.5898978523807	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	70209054	True	NA	16	True	AAAACA	-3	NA	70221360	70244815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_46550.known	chr19	+	1472	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	283.316491533762	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250509	True	NA	16	True	AATAAA	-18	NA	17267385	17279337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_46551.known	chr19	+	1366	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	356.554256039666	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250566	True	NA	16	True	AATAAA	-18	NA	17267442	17279337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_46554.nic	chr19	+	1418	9	NIC	ENSG00000105393.16	novel	1472	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	88	junction_1	342.398068773759	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250552	True	NA	16	True	AATAAA	-18	NA	17267428	17279337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17267517_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_46581.known	chr19	+	930	6	FSM	ENSG00000105393.16	ENST00000447614.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	436.179596038146	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCCTGTACATCTGCA	17250499	True	NA	NA	False	NA	NA	NA	17267375	17279048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_46583.known	chr19	+	966	6	FSM	ENSG00000105393.16	ENST00000595632.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	502.385350104877	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTCCTAGGAGGGAAAC	17250625	True	NA	NA	False	NA	NA	NA	17267501	17279172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_46591.known	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	19.1229574072631	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	17300757	True	NA	5	True	AATAAA	-16	NA	17309562	17323298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_46598.known	chr19	+	863	3	FSM	ENSG00000130312.7	ENST00000595444.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	438	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGAGTTCTTTTG	17290848	True	NA	NA	False	NA	NA	NA	17292608	17306655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17292855_17305830_17305958_17306165
transcript_46599.known	chr19	+	764	2	FSM	ENSG00000130312.7	ENST00000252602.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	0	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	17295998	True	NA	24	True	AATAAA	-20	NA	17305871	17306843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17305958_17306165
transcript_46600.known	chr19	+	2566	9	FSM	ENSG00000130299.17	ENST00000324894.13	2566	9	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	35.7351367704113	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTCATTTCTTTTTA	17332025	True	NA	32	True	TATAAA	-23	NA	17337552	17342731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_46602.known	chr19	-	1001	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	35.3624094201738	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398825	True	NA	-6	True	AATAAA	-29	NA	17405630	17402938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
transcript_46603.known	chr19	-	879	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	211.472614460281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398770	True	NA	-6	True	AATAAA	-29	NA	17405575	17402938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
transcript_46611.known	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	39.3215907613108	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	17415043	True	NA	11	True	AATAAA	-19	NA	17420046	17425332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_46622.known	chr19	+	1745	5	FSM	ENSG00000282851.2	ENST00000635176.2	1745	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGGGCCGAGAGAATT	17405703	True	NA	NA	False	AGTAAA	-11	NA	17405821	17415656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405988_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_46624.known	chr19	+	1633	5	FSM	ENSG00000282851.2	ENST00000647283.1	1633	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.09267638593623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTCTTGGCTGCCGG	17405630	True	NA	NA	False	AGTAAA	-42	NA	17405748	17415687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405772_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_46625.known	chr19	+	1806	4	FSM	ENSG00000282851.2	ENST00000634675.1	1806	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	17405624	True	NA	NA	False	AATAAA	-22	NA	17405742	17415738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405772_17406076_17406297_17413096_17413306_17414390
transcript_46627.known	chr19	+	934	4	FSM	ENSG00000141971.13	ENST00000526234.1	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	52.3641098463442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAAATAAAGTAGAC	17415118	True	NA	-19	True	AATAAA	-7	NA	17420121	17422965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331
transcript_46629.known	chr19	+	786	3	FSM	ENSG00000141971.13	ENST00000528997.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	46.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTTCCCTACCCCTCCT	17415044	True	NA	NA	False	NA	NA	NA	17420047	17421046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17420226_17420312_17420412_17420537
transcript_46630.known	chr19	-	313	2	FSM	ENSG00000269439.7	ENST00000595116.2	359	2	46	0	7	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTCATTCATTTGCA	-17511341	True	NA	NA	False	AATAAA	-35	NA	17511468	17503435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17503623_17511342
transcript_46634.nic	chr19	+	1770	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15711	-24	-27	0	3prime_fragment	TRUE	canonical	3	158	junction_5	11.8081369726741	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	NA	False	NA	14	True	AATAAA	-38	NA	17778413	17788562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_46636.nnic	chr19	+	1661	9	NIC	ENSG00000130475.15	novel	2979	27	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	58.4251658106334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	NA	False	NA	14	True	AATAAA	-38	NA	17778413	17788562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17778885_17781230_17781344_17781451_17781540_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_46638.known	chr19	+	3214	29	FSM	ENSG00000130475.15	ENST00000594202.5	3214	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	59.4101533959525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	17746521	True	NA	9	True	AATAAA	-33	NA	17747717	17788557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788269
transcript_46639.known	chr19	+	2692	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCACAGACAGATTCTT	17794990	True	NA	NA	False	NA	NA	NA	17795137	17813576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17795207_17807757_17808375_17811570
transcript_46640.nnic	chr19	-	824	3	Fusion	ENSG00000248099.4_ENSG00000105639.20	novel	899	3	NA	NA	-9095	0	multi-exon	FALSE	canonical	2	4	junction_1	8	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGCATTTTCTCTAG	-17829567	True	NA	-2	True	AATAAA	-13	NA	17830669	17816513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_17817060_17830107_17830219_17830502
transcript_46645.known	chr19	+	491	6	FSM	ENSG00000105640.13	ENST00000599898.5	491	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	8761.47313184261	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGCATGTTTTCTTT	17852482	False	NA	6	True	AATAAA	-18	NA	17859931	17863315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17859975_17861292_17861308_17861424_17861473_17862093_17862224_17862917_17863028_17863170
transcript_46653.known	chr19	+	634	5	FSM	ENSG00000105640.13	ENST00000222247.10	634	5	0	0	0	0	multi-exon	TRUE	canonical	3	17527	junction_1	2235.3392779397	33597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCATGTTTTCTTTGCAC	17852460	True	NA	10	True	AATAAA	-22	NA	17859909	17863319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17859975_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_4666.known	chr1	+	668	3	FSM	ENSG00000116754.14	ENST00000469170.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATTGTATTA	70209173	True	NA	NA	False	NA	NA	NA	70221479	70231268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70231094
transcript_46661.known	chr19	+	683	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	1	781	junction_1	9457.85420629331	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	17860042	False	NA	-66	True	NA	NA	NA	17860124	17863243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_46679.known	chr19	+	987	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_1	481.378229669768	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	17910295	True	NA	19	True	AATAAA	-27	NA	17933014	17943985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_46686.known	chr19	+	609	2	FSM	ENSG00000007080.11	ENST00000602080.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGGCTGGGCAGAGTG	17910303	True	NA	NA	False	NA	NA	NA	17933022	17936992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17933049_17936409
transcript_46688.known	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	953.586486638732	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	17934965	True	NA	25	True	AATAAA	-33	NA	17935095	17943991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_46689.known	chr19	+	988	7	FSM	ENSG00000216490.4	ENST00000407280.4	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_5	20.8619803044251	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGATGGTGTAATTA	18171464	True	NA	NA	False	AGTAAA	-16	NA	18173812	18178117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18173974_18175039_18175223_18175310_18175386_18175604_18175698_18177139_18177293_18177710_18177765_18177848
transcript_4669.known	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.0749979664876	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-70349696	True	NA	NA	False	AATAAA	-20	NA	70354722	70258998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_46692.known	chr19	+	1578	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_3	19.3697573552174	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	18189130	True	NA	NA	False	NA	NA	NA	18193217	18196948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
transcript_46694.known	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	7.94905654779232	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-18202613	True	NA	-8	True	AATAAA	-32	NA	18204042	18196783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
transcript_46696.known	chr19	-	1253	4	FSM	ENSG00000105649.10	ENST00000464076.3	1253	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	45.73352769638	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCCTGTGAGCACC	-18202613	True	NA	-23	True	AATAAA	-17	NA	18204042	18196798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18203895
transcript_46697.known	chr19	+	415	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGTGCATAGGTTCAA	18204654	True	NA	NA	False	AATAAA	-15	NA	18204733	18209046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18204900_18208289_18208430_18208937
transcript_46698.known	chr19	+	267	2	FSM	ENSG00000268650.3	ENST00000596473.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCATTCTCCCTGCCCTC	18204661	True	NA	0	True	AATAAA	-12	NA	18204740	18205563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18204900_18205455
transcript_467.nic	chr1	-	3323	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1779984	False	NA	NA	False	AATAAA	-20	NA	1780174	1751231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_46702.known	chr19	-	1113	6	FSM	ENSG00000130520.11	ENST00000600289.6	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_2	2220.76379653488	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACATCCACTGTTCC	-18273698	True	NA	-18	True	AATAAA	-17	NA	18323060	18306915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18307556_18309677_18309862_18310109_18310215_18312603_18312703_18316023_18316066_18323017
transcript_46709.known	chr19	-	1704	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_4	489.804744260404	4126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTCTTGAGTCTTCA	-18273714	True	NA	-6	True	AATAAA	-20	NA	18323076	18306235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
transcript_46712.known	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_3	557.795661510557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	-18273750	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
transcript_46713.known	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	2212.99179091714	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	-18273709	True	NA	-9	True	AATAAA	-26	NA	18323071	18306906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
transcript_46717.known	chr19	+	7081	5	FSM	ENSG00000130517.14	ENST00000269919.11	7081	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	6.60965203320114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	18337887	True	NA	16	True	AATAAA	-17	NA	18340597	18369950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363390
transcript_46718.nic	chr19	+	757	5	NIC	ENSG00000130517.14	novel	7081	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	8.67467578644874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACACTTGAAATACGCA	18337876	True	NA	-4	True	GGGGCT	-42	NA	18340586	18369930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18369705
transcript_46721.known	chr19	+	1409	4	FSM	ENSG00000130517.14	ENST00000252813.5	1409	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.0453610171873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	18337898	True	NA	NA	False	NA	NA	NA	18340608	18364342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18340716_18355894_18356012_18357382_18357616_18363390
transcript_46724.known	chr19	+	769	5	FSM	ENSG00000130517.14	ENST00000604499.6	769	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.9034879005639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGGATCCGATCTGGA	18337887	True	NA	NA	False	NA	NA	NA	18340597	18363678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363430
transcript_46725.known	chr19	+	1200	2	FSM	ENSG00000130513.7	ENST00000252809.3	1200	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTGTCCAGGATAA	18385666	True	NA	20	True	AATAAA	-16	NA	18386157	18389176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18386467_18388285
transcript_46727.known	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_8	144.969651996547	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	-18425102	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_46728.known	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	264.079299724931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18425136	True	NA	-35	True	AATAAA	-27	NA	18438167	18434808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
transcript_46729.nic	chr19	-	1961	10	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	-13	0	intron_retention	FALSE	canonical	3	603	junction_7	144.914534199376	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18438169	False	NA	-47	True	AATAAA	-15	NA	18438180	18434820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18437106_18437598_18437761_18437859_18437989_18438092
transcript_4673.nic	chr1	+	881	4	FSM	ENSG00000197568.15	ENST00000689607.1	868	4	-9	-4	-2	0	multi-exon	FALSE	canonical	2	14	junction_2	11.2249721603218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353921	True	NA	17	True	ATTAAA	-22	NA	70354783	70368023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355112_70366443_70366538_70366932_70366985_70367616
transcript_46733.known	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	282.860141014955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	-18425084	True	NA	-87	True	NA	NA	NA	18438115	18434860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
transcript_46735.nic	chr19	-	1539	9	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	281.251416663099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18438169	False	NA	-47	True	AATAAA	-15	NA	18438180	18434820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437598_18437761_18437859_18437989_18438092
transcript_46736.known	chr19	-	2148	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_6	153.496742636448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-18425133	True	NA	-48	True	AATAAA	-14	NA	18438164	18434821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
transcript_46738.nnic	chr19	-	1377	8	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_6	292.282502426146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18438169	False	NA	-47	True	AATAAA	-15	NA	18438180	18434820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437859_18437989_18438092
transcript_46740.known	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	37.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18433259	True	NA	26	True	AATAAA	-26	NA	18433274	18434562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18433614_18433709_18433818_18434216
transcript_46741.known	chr19	-	696	3	FSM	ENSG00000105655.19	ENST00000582287.6	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCACCTGGGGTTCTTGG	-18435726	False	NA	-41	True	AATAAA	-21	NA	18435737	18434814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562
transcript_4675.known	chr1	+	832	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	31	0	-15	0	multi-exon	FALSE	canonical	2	14	junction_2	6.16441400296898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353966	True	NA	17	True	ATTAAA	-22	NA	70354828	70368023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
transcript_46753.known	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_8	957.990442280089	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	-18542946	False	NA	-9	True	AATAAA	-17	NA	18542972	18531761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_46755.known	chr19	-	1710	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1184.99818037835	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	-18519047	True	NA	-9	True	AATAAA	-17	NA	18543524	18531761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_4676.nic	chr1	+	1100	4	FSM	ENSG00000197568.15	ENST00000486110.2	1095	4	-5	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	43.8710230866191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353930	True	NA	17	True	ATTAAA	-22	NA	70354792	70368023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355209_70366145_70366329_70366443_70366538_70367616
transcript_46761.known	chr19	-	1761	9	FSM	ENSG00000105701.16	ENST00000608443.6	1761	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1122.13042356938	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	-18519096	True	NA	-10	True	AATAAA	-16	NA	18543573	18531762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_4677.known	chr1	+	802	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	13	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	28	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353948	True	NA	17	True	ATTAAA	-22	NA	70354810	70368023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355112_70366443_70366538_70367616
transcript_4678.known	chr1	+	898	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	42	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353949	True	NA	17	True	ATTAAA	-22	NA	70354811	70368023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355209_70366443_70366538_70367616
transcript_46785.known	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1697.83773076228	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18519096	True	NA	1	True	AATAAA	-27	NA	18543573	18531751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
transcript_4679.known	chr1	+	692	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	19	112	7	-108	multi-exon	FALSE	canonical	3	29	junction_1	34	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTACCCAAATCCTATAAA	70353942	True	NA	-95	True	NA	NA	NA	70354804	70367911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355108_70366443_70366538_70367616
transcript_46795.known	chr19	+	1327	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	415.000048192768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	18538610	True	NA	-31	True	NA	NA	NA	18557875	18569310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
transcript_46796.known	chr19	+	1095	6	FSM	ENSG00000105700.11	ENST00000595073.5	1095	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	324.917589551566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATATTTTTGTACCCG	18538622	True	NA	-44	True	NA	NA	NA	18557887	18569297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568680_18568829
transcript_46797.known	chr19	+	895	6	FSM	ENSG00000105700.11	ENST00000600654.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	349.164946694252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAAAAGTATCAAATACTT	18538626	True	NA	NA	False	NA	NA	NA	18557891	18569091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568690_18568829
transcript_46799.known	chr19	+	656	6	FSM	ENSG00000105700.11	ENST00000600372.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	437.150042891454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGACACCAGCCCCG	18538540	True	NA	NA	False	NA	NA	NA	18557805	18568495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18560419_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_468.known	chr1	-	3098	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	178.077334857872	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1778646	False	NA	NA	False	AATAAA	-20	NA	1778790	1751231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_46802.known	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	102.558215175577	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	18538604	True	NA	37	True	AATAAA	-27	NA	18557869	18569378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_46803.nnic	chr19	+	1352	5	NNC	ENSG00000105700.11	novel	1496	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_1	383.429507862919	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	18538496	True	NA	37	True	AATAAA	-27	NA	18557761	18569378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_18557815_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_46804.known	chr19	+	1496	5	FSM	ENSG00000105700.11	ENST00000539106.5	1496	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	390.786706529278	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTCTTCAGTCCT	18538496	True	NA	46	True	AATAAA	-36	NA	18557761	18569387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557950_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_46811.known	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2895.88842326496	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	18450214	True	NA	27	True	AATAAA	-17	NA	18571854	18575229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_46813.known	chr19	+	779	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2894.67223705897	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18450234	True	NA	40	True	AATAAA	-30	NA	18571874	18575242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_46819.known	chr19	+	554	5	FSM	ENSG00000221983.8	ENST00000596304.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	2555.1643293534	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAATAAAGTGTCCCTT	18571713	False	NA	0	True	NA	NA	NA	18571729	18575202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571837_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_46823.known	chr19	+	572	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	2550	junction_1	1481.99620444858	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18450161	True	NA	39	True	AATAAA	-29	NA	18571801	18575241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_46826.known	chr19	+	2848	5	FSM	ENSG00000221983.8	ENST00000442744.7	2848	5	0	0	0	0	multi-exon	FALSE	canonical	3	1389	junction_1	1974.99068035776	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGGCAGGAGAAACTGAC	18450216	True	NA	104	True	NA	NA	NA	18571856	18577550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571910_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_46827.known	chr19	+	743	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	2508.80982738828	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAATTGGTGTCCTCAT	18450241	True	NA	32	True	AATAAA	-22	NA	18571881	18575234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_4683.known	chr1	+	2090	12	FSM	ENSG00000116761.12	ENST00000370938.8	2090	12	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	16.8095801098979	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	70407755	True	NA	NA	False	NA	NA	NA	70411267	70439851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_46835.known	chr19	+	491	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	270.591122462574	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18581598	True	NA	10	True	AATAAA	-16	NA	18588801	18592336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
transcript_46838.known	chr19	+	767	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	113.789278932595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCCATCTCTGTG	18581594	True	NA	11	True	AATAAA	-17	NA	18588797	18592337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
transcript_46839.known	chr19	-	1741	9	FSM	ENSG00000006016.12	ENST00000392386.8	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	26.8744185983623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-18604926	True	NA	-10	True	AATAAA	-17	NA	18606799	18593236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18593580_18594064_18594108_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_46840.known	chr19	-	1746	9	FSM	ENSG00000006016.12	ENST00000684169.1	1746	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	31.388692231439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-18604926	True	NA	-10	True	AATAAA	-17	NA	18606799	18593236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18593580_18594064_18594113_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_46841.nnic	chr19	+	1837	7	NNC	ENSG00000105662.16	novel	6879	14	NA	NA	-34	-19885	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	25.0493956458479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACATTTTTTTAAAAGG	18681112	True	NA	NA	False	AATAAA	-22	NA	18683643	18758053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18756899
transcript_46842.known	chr19	+	2438	14	FSM	ENSG00000105671.12	ENST00000629999.3	2438	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	56.5605922150394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACACAGCCACGCTT	18917669	True	NA	NA	False	NA	NA	NA	18919704	18929189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_46846.known	chr19	+	1793	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_12	8.86785706294869	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	18917679	True	NA	15	True	AATAAA	-21	NA	18919714	18928630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_46848.known	chr19	+	1691	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.0527468640925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	18917702	True	NA	7	True	AATAAA	-13	NA	18919737	18928622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_46851.known	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1049.06484070338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-18897778	True	NA	-51	True	NA	NA	NA	18919380	18899562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_46859.known	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2058	junction_7	215.521131271835	2205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-18897785	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_46872.known	chr19	-	907	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	849.074900995195	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCAGCACCCCCAT	-18897773	True	NA	-61	True	NA	NA	NA	18919375	18899572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
transcript_46874.known	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	792.144074253541	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	-18897761	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_4688.nnic	chr1	+	1868	12	NNC	ENSG00000116761.12	novel	2090	12	NA	NA	4	278	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	54.3780765254856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTGATTTTTTTGCA	70407709	True	NA	14	True	TTTAAA	-21	NA	70411221	70439510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_70411657_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_46884.known	chr19	+	1882	14	FSM	ENSG00000105671.12	ENST00000595858.5	1882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.9700595415573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTTTCGAAGA	18917691	True	NA	11	True	AATAAA	-17	NA	18919726	18928626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924852_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_46885.known	chr19	+	1665	3	FSM	ENSG00000269019.2	ENST00000601106.2	1665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGAAACCCTGTCTCT	18940064	True	NA	NA	False	NA	NA	NA	18940234	18947452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18940625_18946080_18946229_18946325
transcript_46889.known	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_10	34.4557687477729	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-19026237	True	NA	-11	True	AATAAA	-16	NA	19033559	18990892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_46890.known	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	141.477416484045	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	19030223	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_46894.known	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	50.079121072029	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	19033542	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_46895.known	chr19	+	2412	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	123.618075423575	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	19030230	True	NA	3	True	AATAAA	-4	NA	19033609	19058159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_46898.nic	chr19	+	2096	6	ISM	ENSG00000105676.14	ENST00000546344.5	1814	7	-3	1325	0	0	5prime_fragment	FALSE	canonical	3	14	junction_1	172.341985598403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	19030230	True	NA	20	True	AATAAA	-21	NA	19033609	19058176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_19033931_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_46899.nnic	chr19	+	1121	5	NNC	ENSG00000105676.14	novel	1252	6	NA	NA	-11	-1568	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	172.477534769024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	19033531	False	NA	NA	False	AATAAA	-14	NA	19033563	19050061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19049665
transcript_469.nic	chr1	-	2084	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	-1779984	False	NA	39	True	NA	NA	NA	1780174	1752470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_46901.nnic	chr19	+	995	4	NNC	ENSG00000105676.14	novel	1318	5	NA	NA	-3	-1568	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	191.074738140748	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	19030202	True	NA	NA	False	AATAAA	-14	NA	19033581	19050061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19049665
transcript_46903.known	chr19	-	536	2	FSM	ENSG00000064607.17	ENST00000597095.5	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-18991598	False	NA	-11	True	AATAAA	-16	NA	18991618	18990892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18991150_18991339
transcript_46904.known	chr19	-	1654	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	86.5616867894492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTTCTGAACAAATAA	-19132957	True	NA	-46	True	NA	NA	NA	19138447	19119659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_46908.known	chr19	-	2251	12	FSM	ENSG00000064545.15	ENST00000162044.14	2251	12	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_11	36.8591242614677	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-19132988	True	NA	NA	False	NA	NA	NA	19138478	19119168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_46909.nic	chr19	-	1786	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	87.2324717764629	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133000	True	NA	-1	True	AATAAA	-25	NA	19138490	19119614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138456
transcript_4691.known	chr1	+	1196	11	FSM	ENSG00000116761.12	ENST00000346806.2	1196	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	55.6866231693034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCAAAATTTTCAAGC	70407870	False	NA	NA	False	ATTAAA	-16	NA	70411382	70439204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_46910.nic	chr19	-	1841	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	85.0371819503068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19132995	True	NA	-1	True	AATAAA	-25	NA	19138485	19119614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134917_19138425
transcript_46912.nic	chr19	-	1716	11	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	89.4686537285546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19138425
transcript_46916.known	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_10	37.8549864614954	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_46918.known	chr19	-	1930	10	FSM	ENSG00000064545.15	ENST00000450333.6	1930	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	89.7400910998941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-19132976	True	NA	NA	False	NA	NA	NA	19138466	19119168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_46923.known	chr19	-	1754	12	FSM	ENSG00000064545.15	ENST00000587985.6	1754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.0468197776363	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCCGATTTTTAC	-19132972	True	NA	-26	True	NA	NA	NA	19138462	19119639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121317_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_46924.known	chr19	+	1376	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	111.279206181546	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192020	True	NA	6	True	AATAAA	-15	NA	19192257	19201866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_46929.known	chr19	+	1212	9	FSM	ENSG00000064490.14	ENST00000407360.7	1212	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	68.7818108223388	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGACAGGTGGTGGG	19192608	False	NA	-58	True	NA	NA	NA	19192762	19201802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_46931.nic	chr19	+	1309	9	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	43.5423644282209	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192489	False	NA	6	True	AATAAA	-15	NA	19192726	19201866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_46938.known	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	116.70580490258	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19189515	True	NA	6	True	AATAAA	-15	NA	19192910	19201866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_46941.known	chr19	-	992	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	28.3379604064936	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-19188921	True	NA	-4	True	NA	NA	NA	19192152	19176905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_46943.known	chr19	-	859	6	FSM	ENSG00000184162.15	ENST00000420605.7	859	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.6917577085136	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAATGTGTGAATTGTG	-19201893	True	NA	-7	True	TATAAA	-15	NA	19203357	19201415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19201564_19201930_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_46946.known	chr19	-	1290	5	FSM	ENSG00000184162.15	ENST00000331552.12	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8691885482127	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-19201950	True	NA	0	True	TATAAA	-22	NA	19203414	19201408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_46947.known	chr19	-	1489	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	14.0079342596338	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTCATGTGCCAGGA	-19192499	True	NA	-9	True	AATAAA	-13	NA	19192589	19181881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
transcript_46950.known	chr19	-	899	4	FSM	ENSG00000184162.15	ENST00000544883.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.692655902933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGAAAAGGTGGGCTGT	-19201895	True	NA	NA	False	NA	NA	NA	19203359	19201638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202042_19202330_19202399_19202790_19202882_19203022
transcript_46951.known	chr19	-	891	4	FSM	ENSG00000184162.15	ENST00000538165.2	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	16.1107279647928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCCACGCTCACACTT	-19201911	True	NA	NA	False	NA	NA	NA	19203375	19202057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202399_19202469_19202576_19202790_19202882_19203022
transcript_46952.known	chr19	-	572	2	FSM	ENSG00000254901.8	ENST00000462498.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCATCAGCATCCGGGA	-19192501	True	NA	NA	False	NA	NA	NA	19192591	19182622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19182684_19192080
transcript_46954.known	chr19	+	1325	9	FSM	ENSG00000064490.14	ENST00000456252.7	1325	9	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	142.805319841384	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192005	True	NA	6	True	AATAAA	-15	NA	19192242	19201866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_46955.known	chr19	+	389	3	FSM	ENSG00000064490.14	ENST00000540977.1	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTGCTGTGCTTCCC	19198625	False	NA	9	True	AATAAA	-18	NA	19198636	19201869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19198724_19199153_19199235_19201648
transcript_46958.known	chr19	-	2282	14	FSM	ENSG00000105705.16	ENST00000588731.6	2282	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	98.3043817908945	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGCCTGGTCCTGTTGC	-19317663	True	NA	-3	True	AATAAA	-21	NA	19320509	19276512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19304044_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_4696.known	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	202.331015912044	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	-71063466	True	NA	-13	True	AATAAA	-17	NA	71081011	71063336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_46961.known	chr19	+	979	7	FSM	ENSG00000250067.12	ENST00000514277.6	979	7	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	43.4805192650175	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTCGCCTCCGCCTCC	19528827	True	NA	4	True	AATAAA	-17	NA	19528910	19537581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19528992_19529363_19529514_19532631_19532741_19535033_19535145_19535336_19535451_19535528_19535680_19537318
transcript_46966.known	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	208.03665542399	4812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	19476256	True	NA	27	True	AATAAA	-17	NA	19516224	19528198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
transcript_46968.known	chr19	+	502	5	FSM	ENSG00000186010.19	ENST00000606722.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_3	4195.69340961658	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGCCTGTTTTCCTGG	19476292	True	NA	24	True	AATAAA	-14	NA	19516260	19528195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526181_19526261_19527280_19527373_19527700_19527771_19528006
transcript_46969.known	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4168.40802945201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	19515711	True	NA	26	True	AATAAA	-16	NA	19515735	19528197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
transcript_46970.known	chr19	+	576	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	135.534333493604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	19476261	True	NA	NA	False	NA	NA	NA	19516229	19528022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
transcript_46975.known	chr19	-	727	2	FSM	ENSG00000105717.14	ENST00000558276.7	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTTGCCAGATTTGT	-19563812	False	NA	1	True	ATTAAA	-25	NA	19563824	19561706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19562118_19563508
transcript_46977.known	chr19	-	2546	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.4356632173606	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628736	False	NA	-28	True	AGTAAA	-16	NA	19628930	19623668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
transcript_46983.known	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	69.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19625923	True	NA	-14	True	AGTAAA	-30	NA	19628220	19623654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19624570_19626542_19627285_19628091
transcript_46986.nic	chr19	-	2473	3	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	90	junction_2	51.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19625939	True	NA	-28	True	AGTAAA	-16	NA	19628236	19623668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19624570_19626542_19627970_19628091
transcript_46987.nnic	chr19	+	1339	5	NNC	ENSG00000181896.12	novel	1830	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	19.3196790863617	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	19665456	True	NA	5	True	AATAAA	-18	NA	19668785	19680032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19668967_19675182_19675301_19677863_19677991_19678725_19678787_19679180
transcript_46992.known	chr19	+	1152	4	FSM	ENSG00000181896.12	ENST00000444249.6	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	15.2970585407784	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	19665521	True	NA	5	True	AATAAA	-18	NA	19668850	19680032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19668967_19677863_19677987_19678725_19678787_19679180
transcript_46995.known	chr19	+	4642	4	FSM	ENSG00000181896.12	ENST00000592502.2	4642	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	6.54896090146283	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCCCTTCTGTTCATT	19665509	True	NA	31	True	AATAAA	-20	NA	19668838	19683506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180
transcript_46997.known	chr19	-	2963	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3.39934634239519	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATAACATTTTTCTT	-19732036	True	NA	-29	True	AATAAA	-15	NA	19733112	19710471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
transcript_47.known	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7530	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00130_+_0_1100
transcript_47002.known	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	13.9283882771841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-19819942	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
transcript_47004.known	chr19	-	1007	4	FSM	ENSG00000081665.14	ENST00000545006.1	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	50.3388517946129	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTATCTTTGTGTCT	-19819914	True	NA	-9	True	AATAAA	-13	NA	19821722	19798788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19799451_19806030_19806127_19806941_19807069_19821600
transcript_47006.known	chr19	-	306	2	FSM	ENSG00000266904.7	ENST00000586816.1	306	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATCCTGTTGATGAATG	-19776213	True	NA	NA	False	ATTAAA	-19	NA	19776394	19771571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19771806_19776322
transcript_47009.nnic	chr19	+	2597	5	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-52	66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.153969112603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAAATCTTTC	19859213	True	NA	5	True	AATAAA	-16	NA	19865829	19893714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473_19893261_19893297
transcript_47010.nnic	chr19	+	3338	5	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-52	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.153969112603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTGGAGAGGCTCTTT	19859213	True	NA	8	True	ATTAAA	-22	NA	19865829	19894455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473_19893261_19893297
transcript_47011.nnic	chr19	+	2346	5	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-52	-185	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	60.153969112603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGACAAAGCCTTT	19859213	True	NA	11	True	AATAAA	-30	NA	19865829	19893463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473_19893282_19893318
transcript_47013.nnic	chr19	+	2597	5	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-52	66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.153969112603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAAATCTTTC	19859213	True	NA	5	True	AATAAA	-16	NA	19865829	19893714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473_19893282_19893318
transcript_47015.known	chr19	+	3542	4	FSM	ENSG00000256771.5	ENST00000589717.2	3542	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	14.1656862405839	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTTTCAGAGTAATG	19859265	True	NA	NA	False	GATAAA	-7	NA	19865881	19894674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473
transcript_4702.known	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	427	junction_1	180.313923786021	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-71063490	True	NA	-1	True	AATAAA	-22	NA	71081035	71063290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_47021.nnic	chr19	+	420	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-47	-6313	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCCTTTTGATTATC	19859218	True	NA	16	True	AATAAA	-19	NA	19865834	19872382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19872127
transcript_47028.known	chr19	+	1334	4	FSM	ENSG00000184635.16	ENST00000592160.5	1334	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	123.777578296269	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCATTTTGGTTT	19893195	True	NA	NA	False	NA	NA	NA	19900970	19932997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19932007
transcript_47029.known	chr19	+	2763	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	24.4994331000173	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	19893170	True	NA	NA	False	AATAAA	-20	NA	19900945	19935575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
transcript_47031.known	chr19	+	570	3	FSM	ENSG00000184635.16	ENST00000588146.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAACCCTTATAACACATA	19893170	True	NA	NA	False	NA	NA	NA	19900945	19933509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19916559_19916656_19933181
transcript_47032.known	chr19	+	868	3	FSM	ENSG00000184635.16	ENST00000592613.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATATATGACATGGTGCT	19893137	True	NA	NA	False	NA	NA	NA	19900912	19909520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19907723_19907817_19908924
transcript_47036.nic	chr19	-	878	5	NIC	ENSG00000197124.12	novel	581	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3412644248931	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	-20037011	True	NA	-5	True	AATAAA	-21	NA	20039534	20004419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20004748_20007140_20007276_20023003_20023100_20024249_20024377_20039342
transcript_47039.nnic	chr19	-	1810	5	NNC	ENSG00000197124.12	novel	581	5	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.6949304067912	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATGATAGTGAT	-20037011	True	NA	-10	True	AATAAA	-15	NA	20039534	20005665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20006926_20007140_20007276_20023003_20023100_20024249_20024377_20039342
transcript_47040.known	chr19	-	3244	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	10.9848380355227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-20036982	True	NA	-3	True	AATAAA	-23	NA	20039505	20004417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
transcript_47041.nic	chr19	-	743	4	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	39.6568615332412	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	-20037011	True	NA	-5	True	AATAAA	-21	NA	20039534	20004419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20004748_20023003_20023100_20024249_20024377_20039342
transcript_47045.known	chr19	-	395	3	FSM	ENSG00000197124.12	ENST00000599240.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATGGAGTCAGTACAAA	-20036927	True	NA	NA	False	AATAAA	-14	NA	20039450	20030716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20030883_20030992_20031114_20039342
transcript_47060.nnic	chr19	-	1461	3	NNC	ENSG00000267383.8	novel	520	3	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	NA	False	NA	-4	True	ATTAAA	-14	NA	20238469	20216142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20217317_20237777_20237883_20238287
transcript_47061.nnic	chr19	-	1425	3	NIC	ENSG00000267383.8	novel	558	3	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTACAGTGTTTTGCTGA	-20217563	True	NA	-7	True	ATTAAA	-11	NA	20238446	20216145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20217317_20220322_20220418_20238287
transcript_47062.nnic	chr19	-	1892	3	NNC	ENSG00000267383.8	novel	618	2	NA	NA	-20	3423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGTCAGCTTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	20238480	20224586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20225191_20227388_20228484_20238287
transcript_47070.known	chr19	-	618	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGCCACAAAGATACTC	-20217548	True	NA	NA	False	AATACA	-2	NA	20238431	20228009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20228484_20238287
transcript_47074.known	chr19	+	1918	6	FSM	ENSG00000213988.11	ENST00000469078.5	1918	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	99.7236180651304	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068775	True	NA	5	True	TATAAA	-5	NA	20077993	20127018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_47076.nic	chr19	+	1818	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	104.611184870453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068750	True	NA	5	True	TATAAA	-5	NA	20077968	20127018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20125005_20126167_20126751
transcript_47079.nnic	chr19	+	972	4	NNC	ENSG00000213988.11	novel	3744	4	NA	NA	-21	-2762	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	135.354678119705	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCTCTTGATTGGAAA	20068754	True	NA	7	True	AATAAA	-15	NA	20077972	20115282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20078136_20104238_20104366_20105220_20105317_20114696
transcript_47080.known	chr19	+	3744	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	93.4273336163816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	20068781	True	NA	6	True	AATAAA	-19	NA	20077999	20121165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
transcript_47082.nnic	chr19	+	673	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-30	11	combination_of_known_splicesites	FALSE	canonical	3	57	junction_3	124.046586230962	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCATTTCTCTGTCTTT	20068745	True	NA	16	True	TATAAA	-16	NA	20077963	20127029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
transcript_47084.nnic	chr19	+	801	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-4	107	combination_of_known_splicesites	FALSE	canonical	3	57	junction_3	124.046586230962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGGTAGTCATTTAGT	20068771	True	NA	10	True	AGTAAA	-15	NA	20077989	20127183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
transcript_47086.known	chr19	+	1724	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	79.5165950534157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	20068775	True	NA	-10	True	NA	NA	NA	20077993	20127076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
transcript_47095.known	chr19	+	734	4	FSM	ENSG00000256229.8	ENST00000597083.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	34.0326640482673	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTCTCTCACCCTCGAC	20163531	True	NA	NA	False	ATTAAA	-17	NA	20167227	20188776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20188398
transcript_47096.nnic	chr19	+	1567	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-34	1480	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	41.2148840428633	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTTGAATCAGAGTG	NA	False	NA	7	True	AATAAA	-21	NA	20167179	20190256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189093
transcript_47097.nnic	chr19	+	1200	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-34	1473	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	43.0297055016131	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCAAGAATATGTTGAAT	NA	False	NA	0	True	AATAAA	-14	NA	20167179	20190249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189453
transcript_47100.known	chr19	+	3895	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	30.5068298363935	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTATGTGTGAATTT	20163517	True	NA	15	True	AATAAA	-21	NA	20167213	20200488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
transcript_47108.nnic	chr19	-	1107	4	FSM	ENSG00000231205.12	ENST00000690249.1	1564	4	-30	487	-8	0	multi-exon	FALSE	canonical	3	26	junction_2	166.879197824854	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20424973	False	NA	-1	True	AATATA	-18	NA	20424986	20405449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409046_20409829_20409957_20424785
transcript_47109.nnic	chr19	-	1098	4	NIC	ENSG00000231205.12	novel	1564	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	166.70199625546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20424973	False	NA	-1	True	AATATA	-18	NA	20424986	20405449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20406133_20408949_20409046_20417665_20417784_20424785
transcript_47111.known	chr19	-	1067	3	FSM	ENSG00000231205.12	ENST00000542380.6	1075	3	1	7	0	-7	multi-exon	FALSE	canonical	2	3	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTCTCTTGATTG	-20424956	False	NA	-6	True	AATAAA	-11	NA	20424969	20340268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20341102_20375959_20376010_20424785
transcript_47116.known	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	-20417116	True	NA	-12	True	AATAAA	-14	NA	20424956	20395954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20399039_20408949_20409025_20424785
transcript_47117.nic	chr19	-	951	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	-13	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	154.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20424965	False	NA	-1	True	AATATA	-18	NA	20424978	20405449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409025_20424785
transcript_47118.known	chr19	-	636	3	FSM	ENSG00000231205.12	ENST00000596724.2	922	3	2	284	0	-284	multi-exon	FALSE	canonical	2	11	junction_1	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGTAGCTATAAAGTA	-20417116	True	NA	NA	False	NA	NA	NA	20424956	20415304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20415652_20417665_20417784_20424785
transcript_4712.nic	chr1	-	1371	9	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	247	662	-7	-662	5prime_fragment	FALSE	canonical	3	891	junction_2	63.5775854763296	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTGGGAATCTGTCCT	-71063497	True	NA	-4	True	AATAAA	-14	NA	71081042	71066380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_47123.known	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	43	junction_1	189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-20417119	True	NA	-3	True	ATTAAA	-17	NA	20424959	20340367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20341102_20408949_20409046_20424785
transcript_47126.nnic	chr19	-	985	5	NNC	ENSG00000237440.9	novel	544	5	NA	NA	-11	3535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.3458710382775	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTCTATGATCATA	-20563591	True	NA	-5	True	ATTAAA	-16	NA	20565820	20541774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20542313_20545935_20545977_20552474_20552571_20553708_20553836_20565637
transcript_47128.nnic	chr19	-	967	4	NNC	ENSG00000269110.1	novel	522	5	NA	NA	95763	6214	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	17.6131264181639	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTTTCAACTTCAT	-20563591	True	NA	NA	False	AATAAA	-19	NA	20565820	20547577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20548139_20552474_20552571_20553708_20553836_20565637
transcript_47130.known	chr19	-	1123	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26.5120517668642	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAATGGATTTATTT	-20656230	True	NA	NA	False	AATATA	-16	NA	20661596	20644701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
transcript_47135.known	chr19	+	757	4	FSM	ENSG00000160229.13	ENST00000594534.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	6.54896090146283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTTATAACATT	20773742	True	NA	NA	False	TATAAA	-1	NA	20776309	20799393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20799000
transcript_47138.nnic	chr19	+	634	3	NNC	ENSG00000160229.13	novel	4539	4	NA	NA	-7	-1512	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAATTTCTTCA	NA	False	NA	NA	False	AAGAAA	-10	NA	20776296	20793085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20776451_20792511_20792639_20792732
transcript_47144.known	chr19	+	483	5	FSM	ENSG00000105750.15	ENST00000601284.5	483	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	31.0996382615618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCTTTCCAAAAAGTG	20921633	True	NA	NA	False	AATATA	-2	NA	20923284	20948791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20946299_20946390_20948743
transcript_47146.known	chr19	+	1531	4	FSM	ENSG00000105750.15	ENST00000300540.7	1531	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	30.4010233745876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTTATTTGACTCTA	20921624	True	NA	NA	False	AATAAA	-21	NA	20923275	20943977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20942800
transcript_47148.nnic	chr19	+	1337	4	NIC	ENSG00000105750.15	novel	2333	4	NA	NA	4	-525	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	28.0832096931007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTGATCTTAATTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	20923225	20945184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20923404_20934023_20934151_20934948_20935048_20944251
transcript_47149.known	chr19	+	2333	4	FSM	ENSG00000105750.15	ENST00000328178.13	2333	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	8.65383665716478	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	NA	False	NA	14	True	AATAAA	-17	NA	20923250	20950697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20948743
transcript_47152.known	chr19	+	549	3	FSM	ENSG00000105750.15	ENST00000599885.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACTAGAGTAAA	20921652	True	NA	NA	False	NA	NA	NA	20923303	20949093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934948_20935048_20948743
transcript_47153.known	chr19	+	1259	4	FSM	ENSG00000105750.15	ENST00000596476.1	1259	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	33.7276675083759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCACTTTTGTCAATA	20921658	True	NA	NA	False	ATTAAA	-45	NA	20923309	20943726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923417_20934023_20934151_20934948_20935048_20942800
transcript_47154.known	chr19	+	3886	5	FSM	ENSG00000118620.13	ENST00000261560.10	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.7662812973354	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGTTATGTGTGGTTA	21020118	True	NA	6	True	AATAAA	-20	NA	21020656	21060050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21056630
transcript_47157.known	chr19	+	3021	4	FSM	ENSG00000118620.13	ENST00000595401.1	3021	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	10.3387082795139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	21020178	True	NA	NA	False	NA	NA	NA	21020716	21036802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088
transcript_47158.nic	chr19	+	511	2	ISM	ENSG00000118620.13	ENST00000595833.1	502	3	-36	10601	-13	-10601	5prime_fragment	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACACTGACCCCAGTG	NA	False	NA	NA	False	AAAAAG	-6	NA	21020620	21023116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21020804_21022788
transcript_47163.known	chr19	+	2671	6	FSM	ENSG00000160352.16	ENST00000610902.4	2671	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	24.2123935206745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074419	True	NA	NA	False	NA	NA	NA	21082208	21125094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806_21118886_21124960
transcript_47165.nic	chr19	+	2711	6	NIC	ENSG00000160352.16	novel	2671	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	24.2123935206745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074357	True	NA	NA	False	NA	NA	NA	21082146	21125094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828_21118886_21124960
transcript_47168.known	chr19	+	2562	6	FSM	ENSG00000160352.16	ENST00000425625.5	2562	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	40.9555856996332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATAATTCATACTGGA	21074413	True	NA	NA	False	TTTAAA	-23	NA	21082202	21118885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21109622_21109645_21116806
transcript_47170.nnic	chr19	+	1201	6	NNC	ENSG00000160352.16	novel	2696	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	35.5415250094871	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074409	True	NA	NA	False	NA	NA	NA	21082198	21125094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806_21117409_21124960
transcript_47172.nic	chr19	+	2730	6	NIC	ENSG00000160352.16	novel	2696	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	23.777300099044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074357	True	NA	NA	False	NA	NA	NA	21082146	21125094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806_21118886_21124960
transcript_47178.known	chr19	+	8752	5	FSM	ENSG00000160352.16	ENST00000456283.7	8752	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	26.9953699733862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074413	True	NA	NA	False	NA	NA	NA	21082202	21125094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806
transcript_47179.known	chr19	+	2066	5	FSM	ENSG00000160352.16	ENST00000620627.1	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	26.9953699733862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	21074460	True	NA	NA	False	AAAAAG	-9	NA	21082249	21118477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828
transcript_47180.nic	chr19	+	2122	5	NIC	ENSG00000160352.16	novel	2562	6	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	26.4799452416352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGAAAATTCATACTG	21074413	True	NA	NA	False	NA	NA	NA	21082202	21118467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806
transcript_47182.known	chr19	+	800	5	FSM	ENSG00000160352.16	ENST00000596053.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	38.347098977628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATAATATTCTG	21074384	True	NA	NA	False	NA	NA	NA	21082173	21125270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21124960
transcript_4719.nic	chr1	-	2759	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	-7	-3079	intron_retention	FALSE	canonical	3	921	junction_1	61.9876779870179	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGTAGTTCAAATAAA	-71063497	True	NA	NA	False	NA	NA	NA	71081042	71068797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_47190.nic	chr19	+	529	4	ISM	ENSG00000160352.16	ENST00000425625.5	2562	6	-4	19911	0	7216	5prime_fragment	FALSE	canonical	3	53	junction_3	20.3360653902262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074409	True	NA	NA	False	NA	NA	NA	21082198	21098974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814
transcript_47195.nic	chr19	+	1142	3	NIC	ENSG00000160352.16	novel	898	2	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	41.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	21074357	True	NA	5	True	AATAAA	-14	NA	21082146	21091758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21090910
transcript_47196.nic	chr19	+	1084	3	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-103	19503	-12	7216	intron_retention	FALSE	canonical	3	94	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074357	True	NA	NA	False	NA	NA	NA	21082146	21098974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21083977_21084070_21098184
transcript_47201.nic	chr19	+	971	2	ISM	ENSG00000160352.16	ENST00000618008.4	647	4	-35	18110	-6	7216	intron_retention	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074378	True	NA	NA	False	NA	NA	NA	21082167	21098974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21098184
transcript_4721.nic	chr1	-	425	5	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	247	6753	-7	-6753	5prime_fragment	FALSE	canonical	3	958	junction_4	57.1161098115059	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTATATTTTGGTGTT	-71063497	True	NA	0	True	AATATA	-36	NA	71081042	71072471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_47210.nnic	chr19	+	2698	6	NNC	ENSG00000196705.8	novel	1971	6	NA	NA	-19	705	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	12.7342059037853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	21136642	True	NA	4	True	AATAAA	-17	NA	21142004	21184797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21175452_21175475_21182622
transcript_47216.known	chr19	+	1971	6	FSM	ENSG00000196705.8	ENST00000600692.5	1971	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	11.7813411800185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCCAGCATTTTGGG	21136661	True	NA	NA	False	ATTAAA	-30	NA	21142023	21184092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622
transcript_47223.known	chr19	+	13894	5	FSM	ENSG00000196705.8	ENST00000311048.11	13894	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	16.3171688720807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGGTGTGTGTGTGTG	21136677	True	NA	NA	False	TATAAA	-16	NA	21142039	21196053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622
transcript_47228.known	chr19	+	610	3	FSM	ENSG00000196705.8	ENST00000594425.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	21136674	True	NA	15	True	AATAAA	-24	NA	21142036	21190231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21142187_21143550_21143644_21189864
transcript_4723.known	chr1	-	525	5	FSM	ENSG00000225087.2	ENST00000666164.1	525	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.17944947177034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	-72898431	False	NA	NA	False	AATAAA	-21	NA	72898976	72748918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_72749029_72749165_72749277_72766644_72766688_72850749_72850801_72898766
transcript_47233.known	chr19	-	4004	4	FSM	ENSG00000182141.10	ENST00000356929.3	4004	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.05536398239638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	-21324725	True	NA	1	True	AATAAA	-25	NA	21329410	21291159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21294740_21309245_21309342_21310500_21310628_21329209
transcript_47234.known	chr19	-	567	3	FSM	ENSG00000182141.10	ENST00000601295.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAGAAAAACCCTACAA	-21324651	True	NA	NA	False	NA	NA	NA	21329336	21294395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21294740_21309245_21309342_21329209
transcript_47244.known	chr19	+	2442	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	51.5333629797241	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	21350230	True	NA	6	True	ATTAAA	-10	NA	21358929	21379300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
transcript_47247.known	chr19	+	1142	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	68.9891295785068	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	21350292	True	NA	8	True	ATTAAA	-12	NA	21358991	21379302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
transcript_47248.nnic	chr19	+	583	5	NNC	ENSG00000172687.14	novel	2442	5	NA	NA	25	379	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	93.8735852090459	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTGTGTTTTTTAAA	21350255	True	NA	3	True	AATAAA	-17	NA	21358954	21379681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21379603
transcript_47249.known	chr19	+	6177	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	86.1365195489114	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	21350300	True	NA	10	True	AATAAA	-25	NA	21358999	21388582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
transcript_4725.known	chr1	-	499	5	FSM	ENSG00000225087.2	ENST00000445976.1	499	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.91607978309962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCCTATGGGTCTCC	-72898595	True	NA	NA	False	AATAAA	-19	NA	72899140	72748920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_72749029_72749165_72749277_72850749_72850801_72898766_72898884_72899028
transcript_47256.nic	chr19	+	569	4	ISM	ENSG00000172687.14	ENST00000597810.5	747	5	-56	2282	25	-396	5prime_fragment	FALSE	canonical	3	210	junction_1	12.5521135891752	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCTATAATGTGATT	21350255	True	NA	NA	False	AAAACA	-43	NA	21358954	21376028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868
transcript_47259.known	chr19	+	1086	3	FSM	ENSG00000172687.14	ENST00000594245.1	1086	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTTTTTAAATGCA	21350330	True	NA	NA	False	AATAAA	-22	NA	21359029	21372842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21371963
transcript_47261.known	chr19	+	747	5	FSM	ENSG00000172687.14	ENST00000597810.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	85.7069862963341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTTTTAATATGATTT	21350311	True	NA	NA	False	AAGAAA	-38	NA	21359010	21378310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378012
transcript_47264.known	chr19	-	967	5	FSM	ENSG00000268119.7	ENST00000600469.7	1443	5	31	445	11	-288	multi-exon	FALSE	canonical	2	11	junction_1	54.6145584986275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTTATTATGCCACAAAC	-21460108	True	NA	NA	False	NA	NA	NA	21463873	21452888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21453280_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_47266.nic	chr19	+	1568	4	ISM	ENSG00000196268.12	ENST00000596302.5	546	5	-15	8397	-15	0	5prime_fragment	FALSE	canonical	2	6	junction_3	9.46337971105226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	21395201	True	NA	51	True	AATAAA	-15	NA	21397103	21414643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21397268_21405128_21405256_21405757_21405857_21413465
transcript_47267.known	chr19	+	1536	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	21395230	True	NA	51	True	AATAAA	-15	NA	21397132	21414643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
transcript_47271.nnic	chr19	-	1286	4	NIC	ENSG00000268119.7	novel	1736	4	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	62.1896740267671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTCAAATTTCTTAT	-21460191	True	NA	NA	False	AATAAA	-44	NA	21463956	21452424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_21453280_21454382_21454473_21456460_21456589_21463743
transcript_47272.known	chr19	-	1581	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	12	143	1	33	multi-exon	FALSE	canonical	3	67	junction_1	35.1883819210577	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTATGTTTTATAATCC	-21460131	True	NA	NA	False	NA	NA	NA	21463896	21452567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
transcript_47276.nic	chr19	+	454	3	ISM	ENSG00000196268.12	ENST00000594390.5	1536	4	-29	8720	-15	87	5prime_fragment	FALSE	canonical	3	21	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCAGTCCTGGCCG	21395201	True	NA	NA	False	TTTAAA	-14	NA	21397103	21405923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21397268_21405128_21405256_21405760
transcript_47277.known	chr19	+	375	3	FSM	ENSG00000197013.11	ENST00000598747.1	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGCAAGACTGTCTA	21504739	True	NA	7	True	AATAAA	-20	NA	21505640	21507664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21505775_21505984_21506081_21507519
transcript_47278.known	chr19	+	681	3	FSM	ENSG00000197013.11	ENST00000596237.5	681	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAGAAAGATATATATA	21504702	True	NA	NA	False	NA	NA	NA	21505603	21518988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21505775_21505984_21506081_21518574
transcript_47282.known	chr19	-	4690	2	FSM	ENSG00000268119.7	ENST00000594557.1	4690	2	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTACAAAACATTACTGA	-21460119	True	NA	NA	False	NA	NA	NA	21463884	21452039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21456589_21463743
transcript_47283.known	chr19	+	1665	4	FSM	ENSG00000196268.12	ENST00000339914.6	1665	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8415464455544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATATGTGTGTGTGTTT	21395253	True	NA	3	True	ATTAAA	-24	NA	21397155	21408799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21397268_21405128_21405256_21405757_21405857_21407472
transcript_47284.known	chr19	-	5584	7	FSM	ENSG00000198521.12	ENST00000594012.5	5584	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	49.7728172131469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTGGTATATATTTT	-21849379	True	NA	NA	False	AATAAA	-25	NA	21852017	21804949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851028_21851904
transcript_47288.known	chr19	-	5235	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	31.0161248385416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTATATATTTTTCTT	-21832779	True	NA	NA	False	AATAAA	-29	NA	21836182	21804945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
transcript_4729.known	chr1	-	1020	3	FSM	ENSG00000225087.2	ENST00000656766.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCATATGGATCTTGTCT	-72898695	True	NA	NA	False	ATTAAA	-21	NA	72899240	72784010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_72784506_72850749_72850801_72898766
transcript_47291.known	chr19	-	580	3	FSM	ENSG00000198521.12	ENST00000599906.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATCTAGCTCAACATAA	-21832784	True	NA	NA	False	NA	NA	NA	21836187	21809478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21836035
transcript_47292.known	chr19	-	3399	7	FSM	ENSG00000198521.12	ENST00000595461.5	3399	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	51.4576416957568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATAATTCATTCTGAAG	-21849390	True	NA	NA	False	AATAAA	-16	NA	21852028	21807280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851163_21851904
transcript_473.nic	chr1	-	1783	11	NIC	ENSG00000008130.15	novel	3098	12	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	210.329764893132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	-1778728	False	2602	39	True	NA	NA	NA	1778872	1752470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1753061_1753566_1753650_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_47300.nnic	chr19	+	538	4	NIC	ENSG00000183850.14	novel	464	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	22.0655588845805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	23071098	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_23075388_23098339_23098414_23134079_23134207_23135947
transcript_47301.known	chr19	+	2326	4	FSM	ENSG00000183850.14	ENST00000597761.7	2326	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.93025150224688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCCAAAGATTTTTT	23115756	True	NA	16	True	AATAAA	-17	NA	23117024	23147221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23117177_23134079_23134207_23135947_23136044_23145270
transcript_47302.known	chr19	+	464	3	FSM	ENSG00000183850.14	ENST00000593635.1	464	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	23071098	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23075388_23134079_23134207_23135947
transcript_47306.nnic	chr19	-	2004	5	NNC	ENSG00000196081.10	novel	583	5	NA	NA	-1	2334	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.6405073623181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAACATGTGGCCTCTCT	-23240464	True	NA	-4	True	AATAAA	-18	NA	23250395	23219264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_23219417_23222545_23224019_23231265_23231362_23232166_23232294_23250239
transcript_47308.known	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	13.0838641081295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-23272040	True	NA	-46	True	NA	NA	NA	23274244	23260000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_4731.nnic	chr1	-	1440	2	NNC	ENSG00000225087.2	novel	1122	5	NA	NA	8	-107321	intron_retention	FALSE	canonical	3	5	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCAAGGCCTTTATTAA	-72898683	True	NA	NA	False	AATAAA	-16	NA	72899228	72891331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_72892310_72898766
transcript_47310.known	chr19	-	2798	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	11.4697670227235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAACTAAT	-23240463	True	NA	NA	False	NA	NA	NA	23250394	23221598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
transcript_47312.known	chr19	-	583	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	7.48331477354788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTTGTCCTATG	-23272047	True	NA	49	True	NA	NA	NA	23274251	23259905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
transcript_47313.known	chr19	-	561	4	FSM	ENSG00000284428.1	ENST00000640517.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.1070255914995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTCTTTG	-23272028	True	NA	NA	False	NA	NA	NA	23274232	23260730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260935_23261619_23261745_23270217_23270293_23274075
transcript_47317.known	chr19	-	574	3	FSM	ENSG00000284428.1	ENST00000638822.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCGCAACCTCCGCCT	-23272044	True	NA	NA	False	NA	NA	NA	23274248	23260658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260935_23261619_23261745_23274075
transcript_47318.known	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23272043	True	NA	2	True	AATAAA	-19	NA	23274247	23269885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23270293_23274075
transcript_47319.known	chr19	-	662	4	FSM	ENSG00000167232.14	ENST00000599743.5	662	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	20.4178571081514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTTATTTATATTCA	-23391174	True	NA	NA	False	AATGAA	-3	NA	23395457	23338748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23339055_23373741_23373838_23374637_23374765_23395324
transcript_4732.nnic	chr1	-	470	3	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTCTATTTATTTA	-72984019	True	NA	-1	True	AATAAA	-22	NA	72985124	72965144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr1_-_72965311_72969291_72969364_72984892
transcript_47321.known	chr19	-	5400	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGAGTCCCGAATAA	-23391188	True	NA	-8	True	AATAAA	-31	NA	23395471	23357695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
transcript_4734.known	chr1	+	4692	4	FSM	ENSG00000254685.8	ENST00000370898.9	4692	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.16496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACTCTGAAATTGTCA	74197432	True	NA	NA	False	AATAAA	-16	NA	74198241	74208702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390
transcript_47359.known	chr19	-	2387	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	35.8364339743786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACATGTTGGCGTGGCT	-23411630	True	NA	NA	False	ATTAAA	-12	NA	23416071	23399232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
transcript_4736.known	chr1	+	601	4	FSM	ENSG00000254685.8	ENST00000467578.7	601	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.9211668240122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACAAACCTGGCTTTAC	74197428	True	NA	NA	False	NA	NA	NA	74198237	74204593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74198361_74199663_74199846_74201317_74201411_74204390
transcript_47360.nic	chr19	-	557	5	NIC	ENSG00000269416.7	novel	798	6	NA	NA	0	-87	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	33.3691474269272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411618	True	NA	NA	False	NA	NA	NA	23416059	23403366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_47362.known	chr19	-	798	6	FSM	ENSG00000269416.7	ENST00000593573.5	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	30.8998381872786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAAATAGGATTGTGCC	-23411618	True	NA	NA	False	NA	NA	NA	23416059	23400983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23401048_23403205_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_47366.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	48.5546656414763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCACAAATAGGATTGT	-23411634	True	NA	NA	False	NA	NA	NA	23416075	23400986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
transcript_47368.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601338.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	41.555852643026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGGTGAGTTGGTGACA	-23411633	True	NA	NA	False	NA	NA	NA	23416074	23403211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23403494_23403719_23403748_23405257_23405336_23415903
transcript_47376.known	chr19	-	595	5	FSM	ENSG00000197372.10	ENST00000597074.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	106.082515053142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGACTTAACCAATGTTT	-23683029	True	NA	77	True	NA	NA	NA	23687140	23654545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23654707_23656721_23656823_23662113_23662210_23663031_23663159_23687030
transcript_47378.known	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	13.0213499897497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	-23683101	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
transcript_47381.known	chr19	-	6497	4	FSM	ENSG00000196172.9	ENST00000402377.3	6497	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATTGTGTATAT	-23756055	True	NA	-4	True	AATAAA	-22	NA	23758891	23739194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23745324_23754822_23754919_23755424_23755552_23758746
transcript_47384.nnic	chr19	-	693	4	NNC	ENSG00000196172.9	novel	6497	4	NA	NA	0	-1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.3836326735943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGTTTTCTTGCTT	-23756055	True	NA	NA	False	AATACA	-18	NA	23758891	23746776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_23747102_23754822_23754919_23755424_23755552_23758746
transcript_47386.nnic	chr19	-	2116	2	NIC	ENSG00000196172.9	novel	628	3	NA	NA	-3	1530	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAATCTTTCA	-23756058	True	NA	-8	True	AATAAA	-17	NA	23758894	23743355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_23745324_23758746
transcript_47397.known	chr19	+	723	2	ISM	ENSG00000288920.1	ENST00000687994.1	4132	4	8	38494	1	0	5prime_fragment	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	23752668	True	NA	NA	False	NA	NA	NA	23763011	23832196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_23763135_23831596
transcript_47398.known	chr19	+	888	1	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	64158	819	45081	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCTTGCATAGGCTCT	23827122	False	NA	-80	True	NA	NA	NA	23827161	23828049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_23827200_23828000
transcript_4740.known	chr1	-	2301	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	186.153925423606	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCTTTTCTAGTTT	-74733216	True	NA	-22	True	AATAAA	-15	NA	74733408	74705489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
transcript_47402.nnic	chr19	+	2762	6	NIC	ENSG00000213096.11	novel	4244	5	NA	NA	48	-1578	combination_of_known_splicesites	FALSE	canonical	3	56	junction_3	42.5600751879035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCTCAGAAGATCTGTC	24028688	True	NA	7	True	AATAAA	-17	NA	24033452	24128383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_24033622_24046183_24046280_24049404_24049549_24105939_24106067_24106547_24106644_24126253
transcript_47403.known	chr19	+	1911	5	FSM	ENSG00000268362.6	ENST00000653003.1	1911	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	33.138912172852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGGTGTGGTGATTG	24028650	True	NA	NA	False	AATAAA	-11	NA	24033414	24066750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24033622_24046183_24046280_24049404_24049549_24057930_24058107_24065462
transcript_47406.known	chr19	+	511	4	FSM	ENSG00000213096.11	ENST00000339642.10	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	55.6796392070048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	24084357	True	NA	12	True	AATAAA	-13	NA	24087183	24107349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24107215
transcript_47407.known	chr19	+	4089	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	44.4996878890428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	24084360	True	NA	9	True	AATAAA	-1	NA	24087186	24129968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
transcript_47409.known	chr19	+	3982	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	68.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	24084333	True	NA	2	True	ATTAAA	-34	NA	24087159	24129961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24087338_24106547_24106644_24126253
transcript_47411.known	chr19	+	819	2	FSM	ENSG00000268362.6	ENST00000664197.1	819	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGCATTTACTTTAG	24028688	True	NA	23	True	AATAAA	-20	NA	24033452	24037395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24033622_24036745
transcript_47412.known	chr19	+	928	3	FSM	ENSG00000268362.6	ENST00000656966.1	928	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTTAGAAAACTTTTG	24028719	True	NA	33	True	AATAAA	-30	NA	24033483	24037405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24033622_24036252_24036383_24036745
transcript_47413.known	chr19	+	381	1	FSM	ENSG00000276030.1	ENST00000620377.1	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTATCTTGCTTATTC	NA	False	NA	8	True	AATAAA	-19	NA	24146700	24147081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24146700_24147100
transcript_47414.known	chr19	-	1295	6	FSM	ENSG00000261824.8	ENST00000656647.1	1295	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	19.5816240388789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-27793805	True	NA	-4	True	AATAAA	-27	NA	27793901	27721701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27721816_27727816_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_47415.known	chr19	-	3832	5	FSM	ENSG00000261824.8	ENST00000654098.1	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	18.0693109995927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATTTCCCCAATCAAT	NA	False	NA	NA	False	CATAAA	-22	NA	27793991	27713134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_47417.known	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	18.6882315910308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-27793804	True	NA	-4	True	AATAAA	-27	NA	27793900	27721701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_47418.known	chr19	-	6226	5	FSM	ENSG00000261824.8	ENST00000657677.1	6226	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	21.1822449235203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATATCCTGCAATAAAAA	-27793310	False	NA	-48	True	AATGAA	-2	NA	27793406	27721745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27726987_27727816_27727980_27732795_27732968_27746097_27746341_27792999
transcript_47419.known	chr19	-	3429	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	0	8	0	multi-exon	FALSE	canonical	3	16	junction_4	13.3486890742125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACTACTTATGAA	-27793738	False	NA	NA	False	AATAAA	-12	NA	27793834	27728229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_4742.known	chr1	-	1908	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	37.2558720203943	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTTCTAGTTTTTAT	-74727789	True	NA	-18	True	AATAAA	-19	NA	74733050	74705485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_47420.known	chr19	-	4842	4	FSM	ENSG00000261824.8	ENST00000656191.1	4842	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	18.9795211273157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAAATTTCTCTCTTT	-27793818	True	NA	NA	False	NA	NA	NA	27793914	27712346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999
transcript_47422.nic	chr19	-	1178	4	FSM	ENSG00000261824.8	ENST00000690384.1	1772	4	594	0	20	0	multi-exon	FALSE	canonical	3	13	junction_2	15.6276108929747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGTGTGTGAATT	-27792520	True	NA	1	True	AATAAA	-27	NA	27793299	27730261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746080_27746341_27792999
transcript_47423.known	chr19	-	3731	4	FSM	ENSG00000261824.8	ENST00000661680.2	4262	4	531	0	-3	0	multi-exon	TRUE	canonical	3	28	junction_1	9.46337971105226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-27793295	False	NA	NA	False	NA	NA	NA	27793391	27727783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999
transcript_47424.known	chr19	-	2229	3	FSM	ENSG00000261824.8	ENST00000659422.1	2229	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCACAACAGTCCCCAGA	NA	False	NA	NA	False	NA	NA	NA	27793940	27790314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27791902_27792999_27793233_27793531
transcript_47425.known	chr19	-	1349	5	FSM	ENSG00000261824.8	ENST00000668560.1	1349	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.2548695139697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGACAGTCTGCAAACA	-27792470	True	NA	NA	False	ATTAAA	-11	NA	27793249	27726482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27726987_27727816_27727980_27732795_27732968_27746080_27746341_27792999
transcript_47426.known	chr19	-	1999	3	FSM	ENSG00000261824.8	ENST00000590523.2	1999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATCTTTCTTTTTTTTT	-27793795	True	NA	NA	False	AATAAA	-20	NA	27793891	27790492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27791902_27792999_27793230_27793531
transcript_47427.known	chr19	+	1759	3	FSM	ENSG00000267575.8	ENST00000659857.2	1764	3	5	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27793004	True	NA	NA	False	AATAAA	-21	NA	27793451	27806782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793610_27797753_27798177_27805604
transcript_47428.known	chr19	+	1824	3	FSM	ENSG00000267575.8	ENST00000585917.6	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGCTTGTAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	27793430	27806785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793651_27797753_27798177_27805604
transcript_47429.known	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	27793035	True	NA	NA	False	NA	NA	NA	27793482	27798282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793610_27797753
transcript_47430.nic	chr19	+	778	2	ISM	ENSG00000267575.8	ENST00000592404.6	1796	3	-31	2090	-10	-14	5prime_fragment	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAGAACAAAACAGCAG	NA	False	NA	NA	False	NA	NA	NA	27793420	27798301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_27793651_27797753
transcript_47431.nnic	chr19	-	1097	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-11	-1946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2031	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	-29180415	True	NA	-14	True	ATTAAA	-25	NA	29213162	29207265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213002_29213055
transcript_47432.nnic	chr19	-	1196	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-113	-1946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	-29180517	False	NA	-14	True	ATTAAA	-25	NA	29213264	29207265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_47434.nnic	chr19	-	1039	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-23	-2013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGCGAAAGGTACAATG	-29180427	True	NA	-26	True	AATAAA	-31	NA	29213174	29207332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_47435.nnic	chr19	-	975	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-11	-2068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2031	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	-29180415	True	NA	-81	True	AATAAA	-18	NA	29213162	29207387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213002_29213055
transcript_47436.nnic	chr19	-	1074	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-113	-2068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	-29180517	False	NA	-81	True	AATAAA	-18	NA	29213264	29207387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_47438.known	chr19	+	846	7	FSM	ENSG00000105171.10	ENST00000591824.5	846	7	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	108.736301819279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAAGCCAATTCCATT	29599629	True	NA	NA	False	NA	NA	NA	29606302	29615458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_29606326_29608656_29608710_29610319_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_47440.known	chr19	+	579	7	FSM	ENSG00000105171.10	ENST00000586420.5	579	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.645898241186	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGGAAACCGATGG	29599609	True	NA	NA	False	NA	NA	NA	29606282	29615266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_29606326_29608656_29608710_29610408_29610633_29611867_29611940_29612116_29612179_29613870_29613973_29615243
transcript_47444.known	chr19	+	2321	6	FSM	ENSG00000105171.10	ENST00000221770.7	2321	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	106.562657624517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	29599620	True	NA	12	True	AATACA	-19	NA	29606293	29617237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_29606326_29608656_29608710_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_47448.known	chr19	-	4265	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-539	0	-100	multi-exon	FALSE	canonical	3	6	junction_2	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	-29714100	False	NA	NA	False	NA	NA	NA	29715060	29699036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29708253_29708424_29714906
transcript_47449.known	chr19	-	4348	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTGGGATTCATT	-29714301	True	NA	NA	False	NA	NA	NA	29715261	29698936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29708253_29708424_29715124
transcript_47452.known	chr19	-	1188	2	FSM	ENSG00000131943.20	ENST00000392275.1	1188	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTCTCATCTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	29715457	29702340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29714906
transcript_47453.known	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	-29714261	True	NA	-15	True	AATAAA	-15	NA	29715221	29701162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29715124
transcript_47456.known	chr19	+	7716	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_1	10.8269211792745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	32342016	True	NA	NA	False	AATAAA	-13	NA	32345609	32387667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_47457.nic	chr19	+	608	2	ISM	ENSG00000168813.17	ENST00000587084.5	5560	4	-45	12145	-14	-12145	5prime_fragment	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAAAATTTGAATATTA	NA	False	NA	NA	False	NA	NA	NA	32345579	32347648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_32345784_32347244
transcript_4746.known	chr1	-	1292	8	FSM	ENSG00000116791.14	ENST00000370871.7	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	166.94689367018	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTGCTCAGTTTCC	-74727761	True	NA	NA	False	ATTAAA	-15	NA	74733022	74705971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_47460.nnic	chr19	-	1072	4	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_2	2.05480466765633	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405178	True	NA	1	True	AATAAA	-24	NA	32405589	32390049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_32390334_32391115_32391187_32399750_32399869_32404990
transcript_47461.known	chr19	-	972	3	FSM	ENSG00000267213.4	ENST00000592680.2	972	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405149	True	NA	1	True	AATAAA	-24	NA	32405560	32390049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32390334_32399750_32399869_32404990
transcript_47464.known	chr19	+	558	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	926.273091480045	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	32551456	True	NA	14	True	AATAAA	-20	NA	32581201	32587425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
transcript_47466.known	chr19	+	601	6	FSM	ENSG00000105185.12	ENST00000586035.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	932.057208544626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATAAAACATTTGGGT	32581507	False	NA	3	True	AATAAA	-9	NA	32581525	32587414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581701_32582194_32582233_32584949_32585012_32585815_32585908_32586857_32586930_32587252
transcript_47469.known	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	973.273952954665	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	32551486	True	NA	41	True	AATAAA	-29	NA	32581231	32587452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
transcript_47470.known	chr19	+	1799	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	0	0	0	0	multi-exon	FALSE	canonical	3	2119	junction_1	133.27665461988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	32551455	True	NA	-24	True	NA	NA	NA	32581200	32587387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
transcript_47473.known	chr19	+	154	3	FSM	ENSG00000105185.12	ENST00000379316.3	154	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1057.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTACAAGTGCTCACAG	32551511	True	NA	-52	True	AAGAAA	-32	NA	32581256	32587297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32587252
transcript_47474.known	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_26	28.660641966976	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-32669631	True	NA	-7	True	AGTAAA	-16	NA	32675180	32597005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_47477.nnic	chr19	-	1663	14	NNC	ENSG00000105186.16	novel	3301	12	NA	NA	0	-3043	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	97.4372806919356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAACACAAGAGGAAC	-32669643	True	NA	NA	False	NA	NA	NA	32675192	32629849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_32630152_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_47478.known	chr19	-	3301	12	FSM	ENSG00000105186.16	ENST00000587352.5	3301	12	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_9	29.3288564076716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATGAAAAGATCTCT	-32669620	True	NA	NA	False	AGTAAA	-34	NA	32675169	32637299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_47481.known	chr19	-	5673	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_7	17.209672847157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCCTGAGTGTTT	-32969321	True	NA	-1	True	ATTAAA	-17	NA	32971958	32875924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_47486.nic	chr19	-	880	7	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-23	6323	5	0	5prime_fragment	FALSE	canonical	3	59	junction_1	13.4989711542111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGTTGAACTTTCACC	-32969349	True	NA	1	True	AATAAA	-24	NA	32971986	32937529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_47487.known	chr19	-	2903	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-32969354	True	NA	0	True	AATAAA	-19	NA	32971991	32968908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32971656_32971835
transcript_47488.known	chr19	-	1340	9	FSM	ENSG00000121289.18	ENST00000590597.6	1340	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	14.1509716980849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAGTAAAAGAGGC	-32969326	True	NA	NA	False	AATAAA	-38	NA	32971963	32931206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_47489.known	chr19	+	2313	5	FSM	ENSG00000131944.10	ENST00000588258.6	2313	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.76313972081441	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATTAGCCAGGCA	32971664	True	NA	NA	False	NA	NA	NA	32972241	32978229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32972347_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_47492.known	chr19	+	875	5	FSM	ENSG00000131944.10	ENST00000254262.9	875	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	17.1901134376711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGGATCATCTGAGGT	32971631	True	NA	NA	False	NA	NA	NA	32972208	32976816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32972347_32973183_32973303_32973483_32973563_32974059_32974213_32976430
transcript_47494.known	chr19	+	784	3	FSM	ENSG00000131944.10	ENST00000590179.1	784	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGCAGTGAGCTGAGAT	32971682	True	NA	NA	False	NA	NA	NA	32972259	32976974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32972347_32974059_32974213_32976430
transcript_47496.known	chr19	-	3501	15	FSM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	8.55742904362839	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTTTTTACTT	-33062454	True	NA	-6	True	AATAAA	-18	NA	33064888	32978591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_47498.known	chr19	+	3191	20	FSM	ENSG00000076650.7	ENST00000170564.7	3191	20	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_15	14.7114442798042	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCGTTTTTTGGGA	33080525	True	NA	NA	False	NA	NA	NA	33081180	33130542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
transcript_47501.known	chr19	+	3730	2	FSM	ENSG00000153879.9	ENST00000284000.9	3730	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTTCATCGTGGCTT	33368691	True	NA	18	True	AATAAA	-21	NA	33373708	33382686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_33373896_33379143
transcript_47503.nnic	chr19	-	1531	12	NIC	ENSG00000124299.15	novel	1907	15	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	16	junction_11	207.39003857267	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-33515167	True	NA	0	True	AATAAA	-19	NA	33521791	33386949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33521743
transcript_47504.known	chr19	-	1907	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_14	49.8649707321928	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-33515167	True	NA	0	True	AATAAA	-19	NA	33521791	33386949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_47505.known	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	195.926573547904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-33515167	True	NA	-30	True	NA	NA	NA	33521791	33386979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_47506.known	chr19	-	1929	16	FSM	ENSG00000124299.15	ENST00000588328.6	1929	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	249.99463105346	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGCGTGGCTTCCC	-33515125	True	NA	-2	True	AATAAA	-17	NA	33521749	33386951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33396089_33396156_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_47507.known	chr19	-	1020	9	FSM	ENSG00000124299.15	ENST00000651646.1	1020	9	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_8	54.2008706110889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCATTATGTCTGCTG	-33515134	True	NA	NA	False	AGTAAA	-26	NA	33521758	33462643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_47510.known	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_10	257.744078496481	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
transcript_47514.known	chr19	+	3431	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	0	0	0	0	multi-exon	TRUE	canonical	3	730	junction_9	113.516301108184	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172503	34229288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_47522.nic	chr19	+	238	2	ISM	ENSG00000166398.14	ENST00000589583.5	582	3	-25	710	2	-227	5prime_fragment	FALSE	canonical	3	56	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTTCAGGAAACATTA	34253428	True	NA	NA	False	AAAAAG	-6	NA	34254555	34299857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_34254615_34299678
transcript_47523.known	chr19	+	6680	14	FSM	ENSG00000166398.14	ENST00000299505.8	6680	14	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	15.9344069686884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCTTGTTTAAAA	34253426	True	NA	NA	False	ATTAAA	-19	NA	34254553	34355566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34254615_34299678_34300969_34319906_34320117_34327420_34327562_34327770_34327867_34327989_34328152_34330188_34330348_34333703_34333802_34339866_34339993_34341421_34342456_34347876_34348043_34349015_34349154_34351513_34351593_34352646
transcript_47524.known	chr19	+	4341	19	FSM	ENSG00000105220.17	ENST00000415930.8	4341	19	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_1	395.456311676074	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	NA	False	NA	28	True	AATAAA	-20	NA	34364739	34402413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34365020_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_47529.known	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_10	169.402675409765	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	34363858	False	NA	28	True	AATAAA	-20	NA	34365195	34402413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_4753.known	chr1	-	1592	7	FSM	ENSG00000116791.14	ENST00000370872.7	1592	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	224.11858220346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTAGTTTTTATATTA	-74727757	True	NA	-14	True	AATAAA	-23	NA	74733018	74705481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74723117_74723271_74732955
transcript_47536.known	chr19	+	1574	16	FSM	ENSG00000105220.17	ENST00000586425.2	1574	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	426.419334562692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACCCATGTTCACGT	34365363	False	NA	-31	True	NA	NA	NA	34365378	34400267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399735_34399786_34399900
transcript_47546.known	chr19	+	1157	7	FSM	ENSG00000126249.8	ENST00000246535.4	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.4112770527204	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	34400662	True	NA	10	True	ATTAAA	-20	NA	34404398	34426168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34404539_34404648_34404816_34404929_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_47550.known	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	28.0670625466934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	34400688	True	NA	-8	True	ATTAAA	-2	NA	34404424	34426150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_47554.nic	chr19	+	2738	18	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_1	249.044888326149	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	34402917	True	NA	28	True	AATAAA	-20	NA	34428380	34469890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34428571_34430092_34430187_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_47557.known	chr19	+	4005	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	87.2288656351784	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	34402917	True	NA	26	True	ACTAAA	-19	NA	34428380	34471251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_47562.nic	chr19	+	2481	16	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	212.10244904029	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	34402924	True	NA	28	True	AATAAA	-20	NA	34428387	34469890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_47569.nic	chr19	-	655	3	FSM	ENSG00000268751.2	ENST00000690771.1	659	3	-1	5	-1	0	multi-exon	FALSE	canonical	3	11	junction_1	24.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	-34577202	True	NA	-6	True	AATAAA	-15	NA	34577798	34576732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34576941_34577265_34577457_34577542
transcript_4757.known	chr1	+	3437	6	FSM	ENSG00000162623.16	ENST00000370867.8	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	15.4090882274066	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	74729581	True	NA	NA	False	AATAAA	-16	NA	74733151	74766677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_47570.known	chr19	-	612	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	4	-36	0	multi-exon	FALSE	canonical	3	29	junction_1	15.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	-34577105	True	NA	-6	True	AATAAA	-15	NA	34577701	34576732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34576995_34577265_34577457_34577542
transcript_47571.nnic	chr19	-	746	3	FSM	ENSG00000268751.2	ENST00000689749.1	747	3	-3	4	-1	0	multi-exon	FALSE	canonical	2	11	junction_1	24.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	-34577202	True	NA	-6	True	AATAAA	-15	NA	34577798	34576732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34577032_34577265_34577457_34577542
transcript_47572.nic	chr19	-	984	2	NIC	ENSG00000268751.2	novel	747	3	NA	NA	-1	0	intron_retention	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTGTGTTCTTCA	-34577202	True	NA	-2	True	AATAAA	-19	NA	34577798	34576728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_34577457_34577542
transcript_47574.known	chr19	+	2600	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	69.2147924940904	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	34674120	True	NA	26	True	AATAAA	-40	NA	34677661	34686397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_47575.known	chr19	+	854	5	FSM	ENSG00000089335.22	ENST00000507959.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.8018722871473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAAGCACCTTTCATT	34674160	True	NA	NA	False	AATATA	-14	NA	34677701	34684405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683151_34683239_34683991
transcript_47576.known	chr19	+	2590	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.3261672471056	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	34674147	True	NA	20	True	AATAAA	-34	NA	34677688	34686391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_47580.known	chr19	-	540	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGAGAGACAGGGAG	-34733644	False	193	1	True	ATTAAA	-23	NA	34733837	34733297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34733300_34733800
transcript_47581.known	chr19	+	498	5	FSM	ENSG00000197841.15	ENST00000593781.5	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	24.4783067224839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTAAGAAGAATTTGG	34733043	True	NA	NA	False	AATAGA	-31	NA	34734262	34740725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739610_34740610
transcript_47584.nic	chr19	+	2726	5	NIC	ENSG00000197841.15	novel	2791	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.6999472573253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	34732974	True	NA	24	True	AATAAA	-40	NA	34734193	34742872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739622_34740610
transcript_47588.nic	chr19	+	2723	5	NIC	ENSG00000197841.15	novel	567	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.6999472573253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	34732974	True	NA	24	True	AATAAA	-40	NA	34734193	34742872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739525_34739622_34740610
transcript_47589.nic	chr19	-	1100	4	ISM	ENSG00000153896.19	ENST00000673783.1	1327	5	-23	1924	1	0	5prime_fragment	FALSE	non_canonical	0	0	junction_3	22.2910046630673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	-34772922	True	NA	5	True	AATAAA	-30	NA	34773214	34766967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_34767412_34769428_34769556_34772335_34772474_34772823
transcript_4759.nnic	chr1	+	1273	6	NNC	ENSG00000162623.16	novel	3437	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	63.3592929253476	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCTTATTCTGAAATA	74729581	True	NA	24	True	AATAAA	-16	NA	74733151	74764400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_74733532_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_47590.known	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	3.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	-34772908	True	NA	5	True	AATAAA	-30	NA	34773200	34766967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34767412_34769428_34769556_34772823
transcript_47591.known	chr19	-	3226	5	FSM	ENSG00000153896.19	ENST00000673678.1	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	20.0686322403895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATGTTTGTGTAATGT	-34772915	True	NA	NA	False	AATAAA	-13	NA	34773207	34758078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34760560_34767315_34767412_34769428_34769556_34772335_34772474_34772823
transcript_47593.known	chr19	-	939	4	FSM	ENSG00000271109.2	ENST00000665881.1	939	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13.4246870437348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860715	34849047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860533
transcript_47594.known	chr19	-	874	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	28.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860691	34849047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34860173_34860303_34860448
transcript_47596.known	chr19	-	847	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860747	34849045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34860173_34860303_34860533
transcript_47597.known	chr19	-	1142	3	FSM	ENSG00000271109.2	ENST00000657506.1	1142	3	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860685	34849045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34850668_34850795_34860173
transcript_47598.known	chr19	-	1046	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860715	34849045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34860173
transcript_47599.known	chr19	-	628	2	FSM	ENSG00000271109.2	ENST00000657568.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGGTCTCATATTTTT	-34850454	False	NA	-3	True	AATAAA	-16	NA	34850796	34849049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34850668
transcript_47600.known	chr19	+	1657	2	FSM	ENSG00000269037.1	ENST00000595783.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCATATGTAAATATGT	34905290	False	NA	11	True	ATTAAA	-13	NA	34905314	34908188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34906225_34907441
transcript_47602.nic	chr19	+	2679	6	NIC	ENSG00000168661.15	novel	2583	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	7.65767588763066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	NA	False	NA	5	True	AATAAA	-20	NA	34926886	34945168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34942593_34942674_34943222
transcript_47603.known	chr19	+	2583	6	FSM	ENSG00000168661.15	ENST00000601957.5	2583	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	6.7705243519243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926492	True	NA	5	True	AATAAA	-20	NA	34926979	34945168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_47604.known	chr19	+	2579	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	10.1334840997556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	34926415	True	NA	1	True	AATAAA	-16	NA	34926902	34945164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_47605.known	chr19	+	2580	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	9.44722181384559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926415	True	NA	5	True	AATAAA	-20	NA	34926902	34945168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
transcript_47607.known	chr19	+	808	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	131.298134030915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	35000411	False	NA	28	True	AGTAAA	-25	NA	35000455	35010639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_47608.known	chr19	+	582	6	FSM	ENSG00000089351.15	ENST00000598073.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	731.657734189969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCCAACGCCATCCAGA	35000837	True	NA	NA	False	NA	NA	NA	35001139	35010339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35001245_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_47609.known	chr19	+	1666	6	FSM	ENSG00000105711.14	ENST00000262631.11	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	8.13879597975032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGTTTCGATTGTGAG	35030257	True	NA	16	True	AATAAA	-16	NA	35030469	35040449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35030861_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_4761.known	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	89.6813804532468	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	74729581	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
transcript_47612.nnic	chr19	+	1765	13	NNC	ENSG00000105707.15	novel	1746	13	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	31.5333817829085	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040618	True	NA	20	True	AATAAA	-16	NA	35041684	35066573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35041873_35042469_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_47613.known	chr19	+	1746	13	FSM	ENSG00000105707.15	ENST00000672452.2	1746	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	21.0277594304925	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040654	True	NA	20	True	AATAAA	-16	NA	35041720	35066573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35041873_35042452_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_47617.nic	chr19	+	1898	13	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_1	29.3115449382435	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040647	True	NA	20	True	AATAAA	-16	NA	35041713	35066573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_47620.nnic	chr19	+	1713	12	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-37	0	combination_of_known_splicesites	TRUE	canonical	3	26	junction_1	28.4747241840087	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040617	True	NA	20	True	AATAAA	-16	NA	35041683	35066573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35041873_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_47627.nnic	chr19	+	1796	11	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-37	0	intron_retention	FALSE	canonical	3	26	junction_1	29.8578297938748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040617	True	NA	20	True	AATAAA	-16	NA	35041683	35066573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35041873_35049289_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_47631.known	chr19	+	1404	8	FSM	ENSG00000089356.19	ENST00000344013.10	1404	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.87139303460597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCGTTTTATCCCTC	NA	False	NA	1	True	AATAAA	-19	NA	35116261	35124323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35116360_35119167_35119252_35119362_35119417_35121077_35121111_35121221_35121246_35122764_35122955_35123270_35123309_35123440
transcript_47637.nnic	chr19	-	739	3	NNC	ENSG00000227392.2	novel	3218	5	NA	NA	15153	-27013	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGGTTCGTGTATTG	-35091020	False	NA	1	True	TATAAA	-21	NA	35091122	35086071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_35086451_35086955_35087101_35090907
transcript_47643.known	chr19	+	708	6	FSM	ENSG00000221946.8	ENST00000270310.7	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	23.2946345753695	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	35142441	True	NA	23	True	AATAAA	-24	NA	35143254	35154302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
transcript_47646.nic	chr19	+	431	4	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	513	5	513	0	3prime_fragment	FALSE	canonical	3	150	junction_3	9.62635271879577	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	NA	False	NA	17	True	AATAAA	-18	NA	35141377	35143050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35141573_35142471_35142522_35142719_35142772_35142916
transcript_47647.nic	chr19	+	484	3	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	605	5	605	0	intron_retention	FALSE	canonical	3	166	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	35139432	True	NA	17	True	AATAAA	-18	NA	35141469	35143050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35141573_35142471_35142522_35142719
transcript_47651.known	chr19	+	878	9	FSM	ENSG00000089327.15	ENST00000392219.7	878	9	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	79.2779919019144	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGATCTCTGATCATTT	35144511	True	NA	17	True	AGTAAA	-17	NA	35154734	35169881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154810_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_47653.known	chr19	+	898	9	FSM	ENSG00000089327.15	ENST00000541435.6	898	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	296.289949837992	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCACTGTGGTCTTT	35144529	True	NA	-5	True	GGGGCT	-34	NA	35154752	35169859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154870_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_47654.known	chr19	+	892	9	FSM	ENSG00000089327.15	ENST00000423817.7	892	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	316.414260701063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	35154742	False	NA	15	True	AGTAAA	-15	NA	35154941	35169879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35155033_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_47668.known	chr19	+	862	9	FSM	ENSG00000089327.15	ENST00000590686.5	862	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	317.064243293059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTCTTTGCCCCA	35144529	True	NA	1	True	AGTAAA	-1	NA	35154752	35169865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154810_35155532_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_47709.known	chr19	-	970	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	440.418856579472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481317	True	NA	-2	True	AATAAA	-21	NA	35510439	35497219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_4771.known	chr1	+	2261	12	FSM	ENSG00000117054.15	ENST00000370841.9	2261	12	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	43.0989635740469	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGAATTTAATATTTCT	75719964	True	NA	14	True	TATAAA	-25	NA	75724708	75763679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_4773.known	chr1	+	1332	12	FSM	ENSG00000117054.15	ENST00000420607.6	1332	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	146.908978397797	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGCTCCAGAAAAAAGAA	75720035	False	NA	NA	False	NA	NA	NA	75724779	75762809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728388_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_47756.known	chr19	-	935	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	410.395566293464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481309	True	NA	-2	True	AATAAA	-21	NA	35510431	35497219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_47771.known	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_9	408.147406650533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-35481324	True	NA	NA	False	NA	NA	NA	35510446	35497336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_47785.known	chr19	-	593	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	389.203934306089	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTCCTCCCCTTGGCCC	-35481303	True	NA	NA	False	NA	NA	NA	35510425	35497489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_47801.known	chr19	-	877	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	424.670801040286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	-35481313	True	NA	-5	True	AATAAA	-18	NA	35510435	35497222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_47812.known	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	305.690601428393	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-35481348	True	NA	-67	True	NA	NA	NA	35510470	35497284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_47835.known	chr19	-	848	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	316.055833675001	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	-35481317	True	NA	-4	True	AATAAA	-19	NA	35510439	35497221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_47836.nic	chr19	-	948	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	530	junction_1	313.61033146247	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481423	True	NA	-2	True	AATAAA	-21	NA	35510545	35497219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_47848.known	chr19	-	638	10	FSM	ENSG00000161249.21	ENST00000597212.5	638	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	403.496141000715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCCCCAGCCTGTGCC	-35510117	False	79	NA	False	NA	NA	NA	35510249	35497477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498597_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
transcript_47854.nic	chr19	-	1062	10	ISM	ENSG00000161249.21	ENST00000436012.5	848	11	-94	-2	-23	0	intron_retention	FALSE	canonical	3	530	junction_1	330.423671169509	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481411	True	NA	-2	True	AATAAA	-21	NA	35510533	35497219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
transcript_47866.known	chr19	-	1257	10	FSM	ENSG00000161249.21	ENST00000418261.5	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	611.024478707889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	-35513349	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_47879.known	chr19	-	1111	9	FSM	ENSG00000161249.21	ENST00000451297.6	1111	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	629.337238191893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGACAAGGAGCCACCA	-35513343	False	NA	-119	True	NA	NA	NA	35513475	35503419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_47887.known	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	579.483689967867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	-35481313	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_47890.known	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	605.703706107067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_47896.known	chr19	-	364	7	FSM	ENSG00000161249.21	ENST00000450261.1	364	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	571.102053538206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCGTGACCTCCAGAC	-35481320	True	NA	NA	False	AAAACA	-42	NA	35510442	35503431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
transcript_4790.known	chr1	+	1451	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	137.499854545378	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTGTTTTCTTTA	75719961	True	NA	NA	False	NA	NA	NA	75724705	75762954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_47912.known	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_3	381.930674337634	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-35481348	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_47913.nic	chr19	-	527	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	719	junction_3	367.673442065102	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481423	True	NA	-3	True	AATAAA	-17	NA	35510545	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_47917.known	chr19	-	577	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_3	392.557241048997	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481347	True	NA	-3	True	AATAAA	-17	NA	35510469	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
transcript_47919.known	chr19	-	414	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_4	408.656946594573	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481353	True	NA	-3	True	AATAAA	-17	NA	35510475	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_47920.known	chr19	-	441	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_3	389.13774874715	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_47925.known	chr19	-	370	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	406.355370950108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481314	True	NA	-3	True	AATAAA	-17	NA	35510436	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
transcript_47926.known	chr19	-	567	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_3	413.505609259281	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
transcript_47927.known	chr19	-	351	4	FSM	ENSG00000161249.21	ENST00000595571.5	351	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	715.620476696039	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35510099	False	NA	-3	True	AATAAA	-17	NA	35510231	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35506050_35510183
transcript_47930.known	chr19	-	306	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	418.550939419432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481301	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
transcript_47935.known	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481318	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35510183
transcript_47937.known	chr19	+	868	7	FSM	ENSG00000105677.12	ENST00000222284.10	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_5	53.3166640616859	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534720	True	NA	37	True	AGTAAA	-17	NA	35545625	35547526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_47938.known	chr19	+	767	6	FSM	ENSG00000105677.12	ENST00000392205.2	767	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_5	46.918653007093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGCACTTTGGCCCTG	35534775	True	NA	-92	True	GGGGCT	-6	NA	35545680	35547397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118
transcript_47943.known	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	48.411646326065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534768	True	NA	37	True	AGTAAA	-17	NA	35545673	35547526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
transcript_47944.known	chr19	+	669	5	FSM	ENSG00000105677.12	ENST00000593027.6	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	771.034167530856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	35534694	True	NA	34	True	AGTAAA	-14	NA	35545599	35547523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35547118_35547241_35547323
transcript_4795.nic	chr1	+	1445	11	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	1	163	junction_4	163.024415349358	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	75777508	True	NA	12	True	AATAAA	-26	NA	75786170	75794803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_47952.known	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	25	junction_3	47.7865624998865	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-35542674	True	NA	-26	True	NA	NA	NA	35545503	35540859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
transcript_47954.known	chr19	+	546	3	FSM	ENSG00000105677.12	ENST00000595180.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACCCCTGAGAAGGGAC	35534739	True	NA	NA	False	NA	NA	NA	35545644	35546829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525
transcript_47955.known	chr19	+	562	2	FSM	ENSG00000105677.12	ENST00000596232.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGACTCAGATGCCCTGT	35534746	True	NA	99	True	NA	NA	NA	35545651	35546284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887
transcript_47956.known	chr19	-	3767	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	17	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-35542678	True	NA	-22	True	ATTAAA	-23	NA	35545507	35540738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35541585_35541750_35542075_35542910
transcript_47957.known	chr19	+	935	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_4	52.0707211396193	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534724	True	NA	37	True	AGTAAA	-17	NA	35545629	35547526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_47958.known	chr19	+	1448	11	FSM	ENSG00000105679.9	ENST00000222286.9	1448	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.00498756211209	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCCCGTATCTCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	35533455	35545319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35533595_35536812_35536991_35538306_35538404_35538576_35538684_35542318_35542410_35542489_35542609_35542944_35543027_35543339_35543492_35543664_35543828_35544908_35545007_35545097
transcript_47959.nnic	chr19	+	372	3	NNC	ENSG00000283907.1	novel	494	3	NA	NA	-37	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACCAATTTCAAAATTTA	35557880	False	NA	NA	False	AATAAA	-16	NA	35557918	35581948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35558028_35575613_35575780_35581851
transcript_47960.known	chr19	+	494	3	FSM	ENSG00000283907.1	ENST00000638356.1	494	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAAAATTTATTCCTG	35557779	True	NA	NA	False	AATAAA	-22	NA	35557955	35581954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35558028_35575613_35575933_35581851
transcript_47962.known	chr19	+	1692	10	FSM	ENSG00000126254.12	ENST00000262633.9	1692	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	161.706028045255	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	35614587	True	NA	16	True	AATAAA	-17	NA	35629035	35637685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_47963.nnic	chr19	+	1665	10	NIC	ENSG00000126254.12	novel	1692	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	251.569296837096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	35614593	True	NA	16	True	AATAAA	-17	NA	35629041	35637685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633097_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_47965.known	chr19	+	1487	9	FSM	ENSG00000126254.12	ENST00000589871.1	1487	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	261.561148443342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCCCCAAAACCAGTT	35614682	False	NA	-28	True	NA	NA	NA	35629130	35637641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_47966.known	chr19	+	1609	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	258.271629055535	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	35614581	True	NA	17	True	AATAAA	-18	NA	35629029	35637686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_47969.known	chr19	+	771	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	306.564022677156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	35614619	True	NA	15	True	AATAAA	-16	NA	35629067	35637684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
transcript_47973.known	chr19	+	536	2	FSM	ENSG00000105672.15	ENST00000591135.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGGCATGAATTACGAG	35643655	False	NA	NA	False	NA	NA	NA	35643665	35644682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35643754_35644234
transcript_47977.known	chr19	+	488	4	FSM	ENSG00000126267.11	ENST00000649813.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	5835	junction_1	624.30174328338	8040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	35577077	True	NA	29	True	AATAAA	-19	NA	35648322	35658782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593
transcript_47979.nic	chr19	+	1014	4	NIC	ENSG00000105668.7	novel	1268	8	NA	NA	6492	0	intron_retention	FALSE	canonical	3	24	junction_1	7.1336448530109	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	35673283	False	NA	NA	False	AATAAA	-22	NA	35673304	35678483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
transcript_47981.nnic	chr19	+	969	4	NNC	ENSG00000105668.7	novel	1268	8	NA	NA	6748	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	15.9234278833282	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	35673195	False	NA	NA	False	AATAAA	-22	NA	35673560	35678483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35673757_35675839_35676020_35677811_35677896_35677974
transcript_47983.nnic	chr19	+	789	3	NIC	ENSG00000105668.7	novel	1268	8	NA	NA	6537	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	14.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	35672984	True	NA	NA	False	AATAAA	-22	NA	35673349	35678483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35673546_35677811_35677896_35677974
transcript_47985.nnic	chr19	-	1102	3	NNC	ENSG00000226510.2	novel	808	2	NA	NA	-171	0	intron_retention	FALSE	canonical	2	11	junction_1	0.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	-35673357	False	NA	-13	True	AATAAA	-14	NA	35673475	35667947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_35668686_35671832_35671956_35673234
transcript_47987.known	chr19	-	795	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	0	13	0	multi-exon	FALSE	canonical	3	38	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	-35673118	True	NA	-13	True	AATAAA	-14	NA	35673291	35667947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35668686_35673234
transcript_48.known	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00131_+_0_800
transcript_48006.nic	chr19	-	875	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_2	51.902686721295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745444	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
transcript_48010.nic	chr19	-	771	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	56.8350439625256	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745444	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745188_35745347
transcript_48011.nic	chr19	-	817	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_5	50.3336092707668	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745444	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
transcript_48012.nic	chr19	-	849	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_5	48.3749820556958	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745451	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745213_35745347
transcript_48015.known	chr19	+	2864	6	FSM	ENSG00000272333.8	ENST00000585476.5	2864	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	17.3735431043872	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTCTTCCCATTTGT	35735195	False	NA	17	True	AATAAA	-18	NA	35735219	35738878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35736987_35737085_35737264_35737635_35737744_35737858_35737943_35738061_35738192_35738281
transcript_48020.known	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	55.5099990992614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744521	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
transcript_48022.nic	chr19	-	739	6	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	63.5402234808786	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745429	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745347
transcript_48023.nic	chr19	-	704	6	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	55.740111230603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745444	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745188_35745347
transcript_48024.known	chr19	-	729	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	53.5738742298893	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	35745445	35742531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
transcript_48026.known	chr19	-	1244	6	FSM	ENSG00000161265.15	ENST00000585554.5	1244	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	63.8510767332862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	-35744500	True	NA	-7	True	AATAAA	-24	NA	35745397	35742528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744982_35745124_35745213_35745347
transcript_48027.known	chr19	-	975	6	FSM	ENSG00000161265.15	ENST00000592913.5	975	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	51.3809303146605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	35745426	35742531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744069_35744422_35744625_35744739_35745124_35745188_35745347
transcript_48030.nic	chr19	-	1407	5	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	58	junction_4	48.411646326065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745444	35742530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35745188_35745347
transcript_48034.known	chr19	-	329	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	46	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	-35739652	False	897	NA	False	NA	NA	NA	35740549	35739527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35739627_35739709_35739770_35740379
transcript_48035.nic	chr19	-	999	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1823	-2	-28	2	3prime_fragment	FALSE	canonical	3	73	junction_2	18.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGTATACAATTAGC	-35739727	False	NA	-24	True	AATAAA	-18	NA	35740624	35739251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_48037.known	chr19	-	482	2	FSM	ENSG00000126246.10	ENST00000587101.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGAGTCCCCAACACC	-35739699	False	897	NA	False	NA	NA	NA	35740596	35739823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35740089_35740379
transcript_48038.known	chr19	-	782	2	FSM	ENSG00000126246.10	ENST00000592889.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCTATTCCAACATACA	-35740438	False	NA	71	True	NA	NA	NA	35741335	35739156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35739627_35741023
transcript_48040.known	chr19	-	1763	3	FSM	ENSG00000161265.15	ENST00000590135.5	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	-35743763	False	897	-7	True	AATAAA	-24	NA	35744660	35742528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35743905_35744069_35744422_35744625
transcript_48041.known	chr19	+	935	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.70957197255464	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	35748239	True	NA	4	True	AGTAAA	-18	NA	35748575	35754519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_48050.known	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	150.169533823905	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	35741946	True	NA	22	True	AATAAA	-26	NA	35745650	35747519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
transcript_48052.known	chr19	+	603	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	538.453959653624	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	35741914	True	NA	21	True	AATAAA	-17	NA	35745618	35747004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
transcript_48054.nnic	chr19	+	597	4	NNC	ENSG00000205155.8	novel	1124	4	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	561.891053101538	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	35741987	True	NA	21	True	AATAAA	-17	NA	35745691	35747004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35745730_35745834_35745992_35746418_35746524_35746707
transcript_48055.known	chr19	+	833	3	FSM	ENSG00000205155.8	ENST00000591949.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	182.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	35741895	True	NA	10	True	AATAAA	-6	NA	35745599	35746993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745834_35745992_35746418
transcript_48062.nic	chr19	-	1231	9	ISM	ENSG00000161270.20	ENST00000353632.6	3741	28	503	21547	503	0	internal_fragment	FALSE	canonical	1	3	junction_2	1.19895788082818	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAAGATTCTGAGGTTT	-35851248	True	NA	NA	False	ATTAAA	-13	NA	35851335	35847926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_35848166_35848252_35848398_35848636_35848795_35848975_35849148_35849235_35849364_35849549_35849654_35850363_35850446_35850960_35851090_35851261
transcript_48064.nic	chr19	+	1673	5	ISM	ENSG00000126259.20	ENST00000592409.5	2563	14	4758	-636	4239	0	3prime_fragment	FALSE	canonical	3	7	junction_2	15.0083310198036	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35861271	True	NA	11	True	AATAAA	-19	NA	35861344	35867136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35861642_35861804_35862025_35862926_35863037_35864647_35864714_35866156
transcript_48066.known	chr19	-	1834	12	FSM	ENSG00000167604.15	ENST00000396901.5	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	6.14023446937028	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTTCCCAGAAACCCAG	NA	False	NA	NA	False	NA	NA	NA	35900650	35888240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_48074.known	chr19	+	445	4	FSM	ENSG00000126264.10	ENST00000437550.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.08248290463863	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTCGTATTCTTTCTC	35902448	True	NA	10	True	AATAAA	-14	NA	35902537	35904270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904122
transcript_48076.known	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	64.5742730094105	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36004665	False	4148	-32	True	AATAAA	-18	NA	36008813	36003306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_48078.known	chr19	-	1175	8	FSM	ENSG00000181392.17	ENST00000490730.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	78.162833696256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004645	False	4148	-35	True	AATAAA	-15	NA	36008793	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_48081.nnic	chr19	-	1237	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	82.0861674637627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004679	False	4148	-35	True	AATAAA	-15	NA	36008827	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
transcript_48082.nnic	chr19	-	1245	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	86.5942004729852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004680	False	4148	-35	True	AATAAA	-15	NA	36008828	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36008216_36008368_36008553
transcript_48084.nnic	chr19	-	1194	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	86.7405134102091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004680	False	4148	-35	True	AATAAA	-15	NA	36008828	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36007124_36007269_36008216_36008368_36008553
transcript_48085.nnic	chr19	-	1058	7	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	93.1565289654401	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004679	False	4148	-35	True	AATAAA	-15	NA	36008827	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008553
transcript_48086.nnic	chr19	-	1140	7	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	85.9762564122599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004680	False	4148	-35	True	AATAAA	-15	NA	36008828	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_48091.known	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	94.0799659863884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004634	False	4148	-35	True	AATAAA	-15	NA	36008782	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
transcript_48098.nnic	chr19	-	945	6	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	92.0686700240641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004680	False	4148	-35	True	AATAAA	-15	NA	36008828	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36007124_36007269_36008216_36008368_36008553
transcript_48101.nnic	chr19	-	864	5	NIC	ENSG00000181392.17	novel	1004	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	103.410287205867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004645	False	4148	-35	True	AATAAA	-15	NA	36008793	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008553
transcript_48105.nic	chr19	-	801	5	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	98.5884754928283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004680	False	4148	-35	True	AATAAA	-15	NA	36008828	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008216_36008368_36008553
transcript_48109.nic	chr19	-	624	4	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	111.493896195661	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004654	False	4148	-35	True	AATAAA	-15	NA	36008802	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008553
transcript_48112.known	chr19	-	382	3	FSM	ENSG00000181392.17	ENST00000397428.8	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004471	False	NA	-35	True	AATAAA	-15	NA	36008619	36003309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36005332_36005438_36008553
transcript_48119.known	chr19	-	3350	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_12	5.24206924227718	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-36032162	True	NA	-4	True	AATAAA	-16	NA	36032873	36014659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
transcript_48124.known	chr19	+	643	4	FSM	ENSG00000267698.2	ENST00000586962.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.8730042868667	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	36013909	True	NA	NA	False	NA	NA	NA	36014507	36045972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36014587_36016811_36016961_36019233_36019385_36045708
transcript_48126.known	chr19	-	1349	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	19.4821855949366	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36054275	False	1046	-1	True	AATAAA	-21	NA	36054285	36034983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
transcript_48128.nic	chr19	-	1277	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	46.5044800709208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36053381	True	NA	-1	True	AATAAA	-21	NA	36054427	36034983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
transcript_4813.known	chr1	+	1941	10	FSM	ENSG00000117054.15	ENST00000681450.1	1941	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	230.285330260817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75720016	True	NA	-69	True	AAAAAG	-19	NA	75724760	75763596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75734790_75734876_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_48130.known	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	-36053331	True	NA	NA	False	NA	NA	NA	36054377	36035147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36035593_36039322_36039719_36054134
transcript_48131.nnic	chr19	-	1084	3	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	66	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36053381	True	NA	-1	True	AATAAA	-21	NA	36054427	36034983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36035593_36039322_36039719_36054348
transcript_48132.known	chr19	+	1980	10	FSM	ENSG00000075702.19	ENST00000378860.8	1980	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	74.2534864293494	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGTTTTGA	36048488	True	NA	NA	False	NA	NA	NA	36054880	36074304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36073648
transcript_48135.known	chr19	+	875	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	645.153439113518	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	36115818	False	NA	37	True	ATTAAA	-20	NA	36115837	36125945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_48137.known	chr19	-	493	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	895.113043140362	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGAGTTTTCTGTGTTT	-36101595	True	NA	-9	True	AATAAA	-13	NA	36114906	36113715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
transcript_48142.known	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	89.8563297714746	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	-36101564	True	NA	-2	True	AATAAA	-20	NA	36114875	36113708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
transcript_48143.known	chr19	-	744	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	902.639374279673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATGCGTGAGTTTT	-36112704	True	NA	-17	True	AATAAA	-5	NA	36115213	36113723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
transcript_48148.known	chr19	-	368	5	FSM	ENSG00000105258.9	ENST00000585842.5	368	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	969.314448463449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	-36101549	True	NA	-7	True	AATAAA	-15	NA	36114860	36113713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114797
transcript_48149.known	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	97.2329676601511	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	-36112684	True	NA	-16	True	AATAAA	-6	NA	36115193	36113722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
transcript_48153.known	chr19	-	542	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	98.8366708261665	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTTTATTTGC	-36101580	True	NA	-3	True	AATAAA	-19	NA	36114891	36113709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
transcript_48154.known	chr19	+	987	6	FSM	ENSG00000105254.12	ENST00000221855.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	1478	junction_2	77.6649212965545	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTTAGAGGACTTC	36106791	True	NA	33	True	ATTAAA	-16	NA	36115467	36125941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_48155.known	chr19	+	1067	7	FSM	ENSG00000105254.12	ENST00000651435.1	1067	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	751.504213782819	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	36106829	True	NA	37	True	ATTAAA	-20	NA	36115505	36125945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36124249_36124364_36125450_36125524_36125667
transcript_48158.nic	chr19	+	1261	10	NIC	ENSG00000126247.11	novel	690	8	NA	NA	113	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	209.978011782422	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36141233	False	NA	24	True	AATAAA	-24	NA	36141415	36150353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36141565_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_48159.nic	chr19	+	1187	10	NIC	ENSG00000126247.11	novel	570	8	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	211.509915711875	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36141598	True	NA	24	True	AATAAA	-24	NA	36141608	36150353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36141684_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_48163.known	chr19	-	340	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	-36152145	False	NA	NA	False	AATAAA	-13	NA	36152447	36150921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
transcript_48164.known	chr19	-	211	4	FSM	ENSG00000161281.11	ENST00000589154.1	211	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTGGGCCTCCTTCC	-36152134	False	NA	NA	False	NA	NA	NA	36152436	36151012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36151035_36151461_36151547_36151695_36151756_36152392
transcript_48166.known	chr19	-	1799	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	5.3851648071345	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGCATCAGATAATCT	-36214337	True	NA	8	True	AATAAA	-32	NA	36214665	36182275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
transcript_48167.nnic	chr19	+	3306	4	NIC	ENSG00000167635.12	novel	3347	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_1	471.780551622138	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36206186	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36215156_36218121_36218196_36228747_36228820_36235658
transcript_48168.known	chr19	+	3347	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	321.45951879237	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36206186	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
transcript_48170.known	chr19	-	1217	4	FSM	ENSG00000196357.12	ENST00000591473.1	1217	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.9938250421547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCGAATCCACACTGGTG	-36214849	False	NA	NA	False	NA	NA	NA	36214873	36182991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36214621
transcript_48171.known	chr19	+	533	3	FSM	ENSG00000167635.12	ENST00000591063.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTCATATGTTGCATTT	36206176	True	NA	NA	False	NA	NA	NA	36215095	36236059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36215156_36228747_36228820_36235658
transcript_48173.known	chr19	+	565	3	FSM	ENSG00000167635.12	ENST00000586094.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	453	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTGCATTTC	36206186	True	NA	NA	False	NA	NA	NA	36215105	36236060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36215197_36228747_36228820_36235658
transcript_48174.known	chr19	-	1931	5	FSM	ENSG00000196357.12	ENST00000392173.6	1931	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	6.78232998312527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCACTCACTGTTTC	-36215057	True	NA	-10	True	AATAAA	-14	NA	36215081	36182293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214887
transcript_48188.nic	chr19	-	1103	7	FSM	ENSG00000232677.10	ENST00000691592.1	1103	7	-16	16	-1	-10	multi-exon	FALSE	canonical	3	113	junction_5	300.960130249839	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	NA	False	NA	-14	True	ATTAAA	-16	NA	36331757	36313076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_48190.known	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	311.553856589123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	-36315068	True	NA	-31	True	NA	NA	NA	36331662	36313093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_48198.known	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	105	junction_4	326.427327287407	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-36315159	True	NA	-14	True	ATTAAA	-16	NA	36331753	36313076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_48199.known	chr19	-	2038	6	FSM	ENSG00000232677.10	ENST00000585356.6	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	339.137376294622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	-36315113	True	NA	NA	False	AAGAAA	-20	NA	36331707	36312585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_48200.known	chr19	-	1571	6	FSM	ENSG00000232677.10	ENST00000659786.2	1571	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	318.210873478579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTTTATTGACTC	-36315140	True	NA	NA	False	GGGGCT	-2	NA	36331734	36315219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_48205.known	chr19	-	1749	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	326.633372452969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATAGCTTACAGTCTTT	-36315124	True	NA	-10	True	AATAAA	-10	NA	36331718	36319715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_48210.known	chr19	-	3581	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	0	7	0	multi-exon	FALSE	canonical	3	105	junction_3	348.121386875325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-36315093	True	NA	-4	True	ATTAAA	-26	NA	36331687	36313066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_48215.known	chr19	-	2540	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	407.520415303195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-36315140	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
transcript_48217.known	chr19	-	2111	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	393.500811802071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-36315140	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
transcript_48218.known	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	310.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-36315151	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325765_36330252_36330493_36331446
transcript_48220.known	chr19	-	1233	3	FSM	ENSG00000232677.10	ENST00000662398.1	1233	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	476.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-36314872	False	NA	-20	True	AATAAA	-6	NA	36331466	36324923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325897_36330252_36330493_36331446
transcript_48221.known	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	223	junction_1	368	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315160	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36327226_36330252_36330493_36331446
transcript_48222.known	chr19	-	2797	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	447.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-36315162	False	NA	-20	True	AATAAA	-6	NA	36331756	36324923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36327171_36330252_36330493_36331446
transcript_48223.known	chr19	-	2047	2	FSM	ENSG00000232677.10	ENST00000661195.1	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTATGTTCAAATCTT	-36315100	True	NA	64	True	NA	NA	NA	36331694	36328693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36330493_36331446
transcript_48225.nnic	chr19	-	947	5	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	-6	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	11.6726175299288	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACTATGTAGAAATG	-36377446	True	NA	NA	False	AATAAA	-23	NA	36379207	36336808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_36337397_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_48226.nnic	chr19	-	950	5	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	-6	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	11.6726175299288	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACTATGTAGAAATG	-36377446	True	NA	NA	False	AATAAA	-23	NA	36379207	36336808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_36337397_36360434_36360537_36362111_36362239_36367883_36367972_36379162
transcript_48227.nic	chr19	-	697	4	ISM	ENSG00000142065.14	ENST00000270001.12	7491	5	-6	25644	-6	15	5prime_fragment	FALSE	canonical	3	28	junction_3	7.78888096369861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTTCTTGAAAAGATCA	-36377446	True	NA	NA	False	AATAAA	-22	NA	36379207	36360096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_36360534_36362111_36362239_36367883_36367972_36379162
transcript_48228.nic	chr19	-	685	4	NIC	ENSG00000142065.14	novel	642	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	10.0332779621949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGCCAAAAATTGAT	-36377446	True	NA	NA	False	AATAAA	-45	NA	36379207	36360111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36360537_36362111_36362239_36367883_36367972_36379162
transcript_48229.known	chr19	-	642	3	FSM	ENSG00000142065.14	ENST00000589280.1	642	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGCCAAAAATTGAT	NA	False	NA	NA	False	AATAAA	-45	NA	36367973	36360111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36360537_36362111_36362239_36367883
transcript_48230.nic	chr19	-	1826	5	NIC	ENSG00000181007.9	novel	1360	2	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	34.1833292702744	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTATCTGTTTTGATA	-36416685	False	NA	-9	True	AATAAA	-14	NA	36418694	36383119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36384436_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48232.nic	chr19	-	1735	5	NIC	ENSG00000181007.9	novel	1360	2	NA	NA	-50	-91	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	34.1833292702744	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATATATGTGGTTGTCT	-36416685	False	NA	-6	True	AATAAA	-25	NA	36418694	36383210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36384436_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48234.known	chr19	-	5941	5	FSM	ENSG00000181007.9	ENST00000392161.4	5941	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	13.9104277432436	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGCTACATAATGAG	-36416635	True	NA	NA	False	AAAAAG	-1	NA	36418644	36388629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36394111_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48238.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000424129.7	5207	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.347903928532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488340	True	NA	2	True	AATAAA	-19	NA	36489506	36445118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489473
transcript_48240.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	3	17	junction_4	9.54921462739214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488352	True	NA	2	True	AATAAA	-19	NA	36489518	36445118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
transcript_48244.known	chr19	-	5327	3	FSM	ENSG00000186017.16	ENST00000493391.6	5327	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36489588	True	NA	2	True	AATAAA	-19	NA	36489861	36445118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36450002_36476548_36476617_36489485
transcript_48248.known	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	11	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-36525365	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36515700_36525154_36525374_36528218
transcript_48249.known	chr19	-	330	2	FSM	ENSG00000254004.7	ENST00000520608.2	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGGGTTTTTTTGTTTG	-36525359	True	NA	NA	False	GATAAA	-45	NA	36528265	36525090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36525374_36528218
transcript_48254.known	chr19	+	1033	5	FSM	ENSG00000233527.10	ENST00000475219.6	1033	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	5.3851648071345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36573049	True	NA	6	True	ATTAAA	-20	NA	36573069	36594708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594155_36594300_36594441
transcript_48257.known	chr19	+	8336	5	FSM	ENSG00000161298.19	ENST00000292928.7	8336	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.76070773396762	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGCAGTACCTCCTGA	36604496	True	NA	4	True	AATAAA	-24	NA	36605312	36634114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36605348_36607551_36607623_36609901_36610054_36610649_36610743_36626129
transcript_48259.nnic	chr19	+	466	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	34	-1472	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	12.7627931460511	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36572545	True	NA	13	True	AATAAA	-17	NA	36573410	36580340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36573526_36574820_36574901_36577140_36577238_36580166
transcript_48260.nic	chr19	+	548	4	FSM	ENSG00000233527.10	ENST00000687100.1	617	4	65	4	34	0	multi-exon	FALSE	canonical	2	6	junction_3	6.97614984548545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36572545	True	NA	6	True	ATTAAA	-20	NA	36573410	36594708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594441
transcript_48261.nnic	chr19	+	476	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	54	-1472	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	12.657891697365	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36572565	True	NA	13	True	AATAAA	-17	NA	36573430	36580340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36573556_36574820_36574901_36577140_36577238_36580166
transcript_48262.known	chr19	+	2080	4	FSM	ENSG00000233527.10	ENST00000670019.1	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	14.7271480229163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATAGAACCATAAGCTAA	36572479	True	NA	NA	False	NA	NA	NA	36573344	36581812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36573556_36574820_36574901_36577140_36577284_36580166
transcript_48263.known	chr19	+	452	4	FSM	ENSG00000233527.10	ENST00000592880.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	8.28653526310404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36572671	False	NA	6	True	ATTAAA	-20	NA	36573536	36594708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36573556_36574820_36574901_36593845_36593932_36594441
transcript_48265.known	chr19	-	5144	5	FSM	ENSG00000186020.13	ENST00000591340.6	5144	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	7.58287544405155	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGGCATTTTCTTACA	-36571508	True	NA	1	True	AATAAA	-22	NA	36573292	36543612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36548323_36554669_36554797_36556103_36556198_36572332_36572393_36573139
transcript_48267.known	chr19	-	3955	6	FSM	ENSG00000197808.13	ENST00000588268.6	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.36643191323985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTTCTCATTCCTT	-36666135	True	NA	0	True	NA	NA	NA	36666837	36636617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_48269.known	chr19	-	3326	6	FSM	ENSG00000197808.13	ENST00000396893.6	3326	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	6.71118469422501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTCAAAACACAACCAATA	-36666117	True	NA	NA	False	AAAAAG	-18	NA	36666819	36637191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658335_36658426_36664697_36664787_36666689
transcript_48270.known	chr19	-	2361	5	FSM	ENSG00000197808.13	ENST00000360357.8	2361	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.45658578507248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAATATTTCTAGAAT	-36666139	True	NA	NA	False	NA	NA	NA	36666841	36638146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36640044_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_48272.known	chr19	-	3668	3	FSM	ENSG00000225975.8	ENST00000665321.2	3702	3	34	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-36687129	True	NA	NA	False	NA	NA	NA	36687434	36682635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36686016_36686685_36686807_36687267
transcript_48275.known	chr19	+	2802	6	FSM	ENSG00000189042.14	ENST00000682579.1	2802	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	19.3969069699269	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTGTGTGTTTGCGT	36686185	True	NA	25	True	AATAAA	-27	NA	36687611	36721336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_48277.known	chr19	+	2825	6	FSM	ENSG00000189042.14	ENST00000536254.6	2825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.7694980126336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTATATCATGTGTG	36686201	True	NA	16	True	AATAAA	-18	NA	36687627	36721327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36687687_36689400_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_48279.nic	chr19	+	2766	5	NIC	ENSG00000189042.14	novel	2802	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	26.4799452416352	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	NA	False	NA	15	True	AATAAA	-17	NA	36687562	36721326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36687635_36689396_36689498_36712385_36712513_36712780_36712868_36718947
transcript_48281.nnic	chr19	+	2754	5	NIC	ENSG00000189042.14	novel	2825	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	36.0026040724834	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	36686200	True	NA	15	True	AATAAA	-17	NA	36687626	36721326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36687687_36689396_36689498_36712385_36712513_36712780_36712868_36718947
transcript_48284.nnic	chr19	-	1142	5	NNC	ENSG00000267041.6	novel	523	5	NA	NA	-12	-14203	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	10.7354552767919	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTGTCCTATCCTT	-36763504	True	NA	NA	False	TATAAA	-43	NA	36772837	36728585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_36729311_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_48287.known	chr19	+	2691	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	26.7374061735406	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	36688614	False	NA	15	True	AATAAA	-17	NA	36689399	36721326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
transcript_48288.known	chr19	+	1850	2	FSM	ENSG00000267260.3	ENST00000590750.1	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGCATTTCCTGTG	36772116	True	NA	11	True	AATAAA	-24	NA	36773152	36777078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36773310_36775385
transcript_48290.known	chr19	+	2062	2	FSM	ENSG00000267260.3	ENST00000663625.1	2062	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTCAGAAAAAATTAAATA	36772088	True	NA	-34	True	NA	NA	NA	36773124	36777033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36773539_36775385
transcript_48291.known	chr19	+	646	2	FSM	ENSG00000267260.3	ENST00000687335.1	1273	2	65	562	37	-557	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTAGACGGCCTCCG	36772153	True	NA	NA	False	NA	NA	NA	36773189	36775711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36773510_36775385
transcript_48293.nnic	chr19	+	1097	6	NNC	ENSG00000267254.7	novel	3024	4	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	27.6593564639527	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTACTTGAGAGTGATT	36795850	True	NA	27	True	AATAAA	-35	NA	36797506	36828111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36797812_36801202_36801241_36801875_36801934_36823730_36823822_36825379_36825523_36827649
transcript_48294.known	chr19	-	5032	6	FSM	ENSG00000185869.15	ENST00000391711.8	5032	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	9.57914401186244	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	-36916198	True	NA	0	True	TATAAA	-20	NA	36916291	36888123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36916010
transcript_48298.nic	chr19	+	944	5	NIC	ENSG00000267254.7	novel	850	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	25.6758641529355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAACATGAAGTACTT	36795850	True	NA	17	True	AATAAA	-25	NA	36797506	36828101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36797812_36801202_36801241_36801875_36801934_36823730_36823822_36827649
transcript_48301.known	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.56224173112709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-36838086	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
transcript_48302.known	chr19	-	922	5	FSM	ENSG00000197863.9	ENST00000528994.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	6.59545297913646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGTTCAGATCATAC	-36850231	False	NA	-85	True	AATACA	-43	NA	36850313	36819806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_48305.known	chr19	-	581	5	FSM	ENSG00000197863.9	ENST00000586323.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	9.73075022801428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATACGCACCTGTGAAAA	-36850705	True	NA	90	True	NA	NA	NA	36850787	36819923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850699
transcript_48311.known	chr19	+	3024	4	FSM	ENSG00000267254.7	ENST00000657461.1	3024	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	10.1980390271856	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTATCTCTATCTATT	36795845	True	NA	16	True	CATAAA	-20	NA	36797501	36830267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36827649
transcript_48312.known	chr19	+	850	4	FSM	ENSG00000267254.7	ENST00000588906.5	850	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAACATGAAGTACTT	36795906	True	NA	17	True	AATAAA	-25	NA	36797562	36828101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36797812_36801875_36801934_36823730_36823822_36827649
transcript_48313.nnic	chr19	+	520	4	NNC	ENSG00000251247.12	novel	3103	4	NA	NA	-22	-11011	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.0388511535855	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCAGTTTGCTAGAG	36850040	True	NA	NA	False	CATAAA	-18	NA	36850853	36866043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36850969_36851829_36851905_36862916_36863012_36865808
transcript_48314.known	chr19	+	881	3	FSM	ENSG00000267254.7	ENST00000663523.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACGCCTGTAATCCCA	36795877	True	NA	110	True	AATAAA	-24	NA	36797533	36828194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36797812_36801875_36801934_36827649
transcript_48315.known	chr19	+	2959	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	36850062	True	NA	12	True	ATTAAA	-24	NA	36850875	36879575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36850969_36851829_36851905_36876784
transcript_48319.known	chr19	+	4096	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	5.14511634681104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGAATGTTTACTTGT	36915885	True	NA	17	True	AATAAA	-27	NA	36916331	36952734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_48322.known	chr19	+	1725	5	FSM	ENSG00000198453.14	ENST00000433993.5	1725	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	2.73861278752583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTCTGATTCACATC	36972763	True	NA	NA	False	NA	NA	NA	36973214	36997235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36973754_36974419_36974467_36991175_36991300_36991750_36991847_36996316
transcript_48324.known	chr19	+	561	4	FSM	ENSG00000198453.14	ENST00000455817.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.64279609239471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTTCATACTGGAGAGA	36973294	True	NA	NA	False	NA	NA	NA	36973537	36996518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36973754_36974419_36974467_36991750_36991847_36996316
transcript_48325.nic	chr19	+	795	3	ISM	ENSG00000198453.14	ENST00000333987.12	4096	7	-19	29703	-16	-13793	5prime_fragment	FALSE	canonical	3	23	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTCTTAAGAGTAT	36916301	True	NA	NA	False	AATAAA	-14	NA	36916312	36923031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_36916592_36917578_36917649_36922585
transcript_48326.known	chr19	+	1902	3	FSM	ENSG00000198453.14	ENST00000586353.5	1902	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGCCTTTAATGTTT	36972761	True	NA	NA	False	AGTAAA	-30	NA	36973212	36980317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36973754_36974419_36974467_36979003
transcript_48329.known	chr19	+	3639	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	6.01560470775798	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGAAGTGGGA	37077256	True	NA	65	True	AATAAA	-20	NA	37078432	37130368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
transcript_48330.known	chr19	-	6822	6	FSM	ENSG00000196967.11	ENST00000356958.8	6822	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	135.539514533585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGTTAGTCAACATTT	-37171226	False	NA	NA	False	AATAAA	-20	NA	37172741	37147437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37165594_37165697_37169838_37170055_37172626
transcript_48331.known	chr19	-	8572	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	103.453794033858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGTGTTCTATTAT	-37171180	True	NA	NA	False	AATAAA	-16	NA	37172695	37145539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
transcript_48332.known	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	33.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	-37171179	True	NA	71	True	AATAAA	-17	NA	37172694	37165384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37165697_37169838_37170055_37172626
transcript_48338.known	chr19	+	6732	6	FSM	ENSG00000188283.12	ENST00000684119.1	6732	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.90842298052804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGTATCACTGTT	37217565	True	NA	3	True	AATAAA	-18	NA	37218213	37248740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_48342.nnic	chr19	+	1439	5	NIC	ENSG00000188283.12	novel	6732	6	NA	NA	3	-110	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	6.83282518435822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACATCTGAGAATTCAC	37218041	False	NA	2	True	AATAAA	-14	NA	37218192	37243548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_37218275_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_48343.nnic	chr19	+	1576	5	NIC	ENSG00000188283.12	novel	6732	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	6.83282518435822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCTCATATTTTAAACC	37218041	False	NA	NA	False	AATAAA	-25	NA	37218192	37243685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_37218275_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_48345.known	chr19	-	570	3	FSM	ENSG00000267605.8	ENST00000653146.2	575	3	5	0	5	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGGTGCCCCTTT	-37304157	True	NA	NA	False	ATTAAA	-21	NA	37304362	37265938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37266086_37266813_37266984_37304109
transcript_48349.nic	chr19	+	3000	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	35.4906090865363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAATTGTCAGTGTAT	37313756	True	NA	21	True	AATAAA	-22	NA	37317892	37364447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
transcript_48353.nnic	chr19	+	1059	6	NNC	ENSG00000181666.19	novel	575	6	NA	NA	6	607	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	66.9626761711328	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTTCCTCAGTGGT	37313756	True	NA	NA	False	ATTAAA	-23	NA	37317892	37329712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984_37329065_37329171
transcript_48354.known	chr19	+	2854	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	49.4691823259694	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	37313774	True	NA	20	True	AATAAA	-21	NA	37317910	37364446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
transcript_48358.known	chr19	+	568	6	FSM	ENSG00000181666.19	ENST00000585623.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	54.6384480013845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAAGTTTATGGGCAGG	37333599	True	NA	NA	False	NA	NA	NA	37334655	37362209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37334783_37335168_37335258_37346422_37346493_37347231_37347317_37347776_37347873_37362108
transcript_48360.known	chr19	+	958	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.8995073871702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	37313763	True	NA	NA	False	AAGAAA	-20	NA	37317899	37329105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
transcript_48361.nnic	chr19	+	1160	5	NNC	ENSG00000181666.19	novel	958	5	NA	NA	6	601	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	60.0416522091123	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATATTATGTTTCCTC	37313756	True	NA	NA	False	ATTAAA	-17	NA	37317892	37329706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984
transcript_48363.known	chr19	+	734	5	FSM	ENSG00000181666.19	ENST00000591259.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	50.2959988468268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTGTGTTCTTATTGA	37333655	True	NA	NA	False	AGTAAA	-33	NA	37334711	37359776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37359425
transcript_48364.known	chr19	+	2772	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	17	-4	-5	4	multi-exon	FALSE	canonical	3	44	junction_2	41.0327613011847	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	37333609	True	NA	25	True	AATAAA	-26	NA	37334665	37364451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
transcript_48365.known	chr19	+	563	5	FSM	ENSG00000181666.19	ENST00000591391.5	563	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	53.8725347463807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCAGGATCCATTCTGC	37333601	True	NA	NA	False	AAAACA	-21	NA	37334657	37362273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37334783_37335168_37335258_37347231_37347317_37347776_37347873_37362105
transcript_48367.known	chr19	+	1142	5	FSM	ENSG00000189164.15	ENST00000483919.5	1142	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.88986691902975	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATCTGATGTAAATTAAC	37370653	True	NA	NA	False	AATAAA	-25	NA	37371158	37385644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37384867
transcript_48369.known	chr19	-	4066	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	5.85149553533112	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-37466900	True	NA	-18	True	AATAAA	-15	NA	37467444	37411156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
transcript_48373.known	chr19	+	5283	5	FSM	ENSG00000171827.11	ENST00000330173.6	5283	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.03108891324554	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTCTATCAGTTCT	37468512	True	NA	7	True	AATAAA	-15	NA	37469355	37488652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476435_37483878
transcript_48381.nnic	chr19	+	1812	8	NNC	ENSG00000188227.14	novel	3869	7	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	11.4606692115038	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACGTTTACATGTTGT	37506759	False	NA	10	True	AATAAA	-23	NA	37507137	37536535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_37507308_37508264_37508404_37520183_37520313_37522531_37522648_37523409_37523455_37532355_37532483_37533307_37533404_37535545
transcript_48385.known	chr19	-	1033	4	FSM	ENSG00000266916.8	ENST00000585890.3	1038	4	0	5	0	-5	multi-exon	TRUE	canonical	1	1	junction_1	6.12825877028341	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTTCAAGGTTCT	-37506808	True	NA	NA	False	AATAAA	-35	NA	37507087	37497163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37497593_37498023_37498184_37505845_37506041_37506838
transcript_48388.known	chr19	-	2289	4	FSM	ENSG00000180479.14	ENST00000451802.7	2289	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.92160768674447	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	-37594349	True	NA	-6	True	ATTAAA	-19	NA	37594792	37564259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594740
transcript_48389.known	chr19	-	403	4	FSM	ENSG00000196381.11	ENST00000585624.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTTCCAGTTTCTTG	-37692125	False	108	NA	False	AATAAA	-28	NA	37692233	37678622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37678774_37686450_37686523_37691520_37691619_37692151
transcript_48390.known	chr19	-	448	3	FSM	ENSG00000266916.8	ENST00000585397.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTGAGTTTAAAGCCA	-37505988	False	NA	NA	False	NA	NA	NA	37506267	37497362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37497593_37505845_37506041_37506244
transcript_48392.known	chr19	-	913	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507122	37497158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37497593_37505845_37506041_37506838
transcript_48395.known	chr19	-	1360	2	FSM	ENSG00000267152.1	ENST00000588040.1	1360	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTCCTGTTTTTTCTTT	NA	False	NA	1	True	ATTAAA	-29	NA	37730643	37728585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37729785_37730482
transcript_48396.known	chr19	-	2443	6	FSM	ENSG00000189144.15	ENST00000586155.5	2443	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.99332590941915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	-37779145	True	NA	NA	False	NA	NA	NA	37779585	37738301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37740195_37770004_37770098_37770406_37770598_37771563_37771697_37773660_37773752_37779543
transcript_48399.known	chr19	-	476	5	FSM	ENSG00000189144.15	ENST00000378445.8	476	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.53553390593274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGGTTATCAACTTAT	-37779134	True	NA	NA	False	AAGAAA	-16	NA	37779574	37740060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37740195_37770004_37770098_37771563_37771691_37773660_37773752_37779543
transcript_484.known	chr1	-	3163	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_11	320.105457829496	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGGTGATTATTT	-1863093	True	NA	-1	True	AATAAA	-19	NA	1891087	1785285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
transcript_48403.known	chr19	-	453	4	FSM	ENSG00000189144.15	ENST00000585724.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATACTGGTGAGAAA	-37779123	True	NA	NA	False	NA	NA	NA	37779563	37739945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37740195_37770004_37770098_37773660_37773752_37779543
transcript_48405.nnic	chr19	-	837	3	NNC	ENSG00000189144.15	novel	2266	3	NA	NA	11	-13777	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTTTTCACTGGTG	-37817172	True	NA	NA	False	AATAAA	-19	NA	37817281	37807811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_37808232_37810604_37810801_37817060
transcript_48406.known	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.40312423743285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	37816723	True	NA	7	True	AATAAA	-19	NA	37817410	37832160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
transcript_48408.nic	chr19	+	2290	4	FSM	ENSG00000267640.7	ENST00000685725.1	2389	4	99	0	20	0	multi-exon	FALSE	canonical	3	19	junction_3	8.9566858950296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTGATTTTTTTTTA	37816743	True	NA	14	True	AATAAA	-19	NA	37817430	37827986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37826171
transcript_48411.known	chr19	-	2301	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	9.15342143501227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38223689	False	533	-10	True	ATTAAA	-26	NA	38224222	38211005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_48412.known	chr19	-	2356	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	11.6484312425847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCCTCGTTCTCCCGT	-38223717	False	NA	-13	True	ATTAAA	-23	NA	38224250	38211008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_48417.known	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	467.674499518629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	-38315904	False	2916	-12	True	AATAAA	-17	NA	38315923	38305113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_48427.known	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	317.512204489843	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315774	False	NA	NA	False	NA	NA	NA	38315793	38305351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
transcript_48428.nic	chr19	-	1255	8	NIC	ENSG00000167645.17	novel	2769	8	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_7	340.337587505976	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACAGCCTCTCCTTGG	-38315834	False	NA	-13	True	AATAAA	-16	NA	38315853	38305114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
transcript_48429.known	chr19	-	940	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	352.109850669895	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315780	False	NA	NA	False	NA	NA	NA	38315799	38305351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
transcript_48430.known	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	215.510594464705	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	-38315895	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_48435.known	chr19	-	1077	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	400.474310623525	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	-38315901	False	NA	NA	False	NA	NA	NA	38315920	38306696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_48438.known	chr19	+	1688	7	FSM	ENSG00000167642.13	ENST00000301244.12	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	2937	junction_5	127.361253483502	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGAACTTTCGCCAA	38255604	True	NA	4	True	AATAAA	-16	NA	38264572	38292615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38264999_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_48442.known	chr19	+	1246	7	FSM	ENSG00000167642.13	ENST00000587090.5	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1180.42526470571	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCATGTGCTTTCTTT	38255607	True	NA	14	True	AATAAA	-26	NA	38264575	38292451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38264724_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_48460.known	chr19	+	1367	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	1205.61370264277	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	38255607	True	NA	31	True	AATAAA	-43	NA	38264575	38292468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_48465.known	chr19	+	520	4	FSM	ENSG00000167644.12	ENST00000588605.5	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	76.2932937201342	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301538	True	NA	27	True	ATTAAA	-18	NA	38304163	38305006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38304284_38304374_38304491_38304564_38304687_38304844
transcript_48466.known	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	17.5562587763516	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301625	True	NA	27	True	ATTAAA	-18	NA	38304250	38305006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
transcript_48467.known	chr19	-	560	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	16.391054470859	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	-38256348	False	1037	-1	True	NA	NA	NA	38256374	38251236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
transcript_48468.known	chr19	+	462	3	FSM	ENSG00000167644.12	ENST00000589986.2	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCGACTGGTCAGCGTG	38301625	True	NA	24	True	ATTAAA	-15	NA	38304250	38305003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38304491_38304623_38304687_38304844
transcript_48472.known	chr19	+	1330	7	FSM	ENSG00000099341.12	ENST00000602911.5	1330	7	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_3	96.1087347169283	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGAAATGGAACCCATC	38351529	True	NA	27	True	AATAAA	-34	NA	38374758	38383824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116_38382229_38383252
transcript_48476.known	chr19	+	771	6	FSM	ENSG00000099341.12	ENST00000592561.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_3	102.071347595689	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACCAAGGGGTGAAGT	38351542	True	NA	NA	False	NA	NA	NA	38374771	38382254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116
transcript_48481.nnic	chr19	+	833	4	NIC	ENSG00000188766.13	novel	478	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAATGGATGAACAAAT	38388325	True	NA	NA	False	AATAAA	-17	NA	38388667	38392647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_38388808_38390298_38390387_38391945_38392115_38392211
transcript_48487.nnic	chr19	+	1084	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-22	-20809	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	6.73300329224139	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGTGTGCA	38431805	True	NA	10	True	AATAAA	-26	NA	38433668	38447077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_48490.known	chr19	-	2631	31	FSM	ENSG00000104814.13	ENST00000396857.7	2631	31	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_30	24.6041776037232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38617859	False	94	-3	True	AATAAA	-19	NA	38617953	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567_38605731_38606172_38606216_38607863_38607912_38607989_38608034_38608111_38608171_38609595_38609675_38609908_38610026_38611050_38611133_38611242_38611306_38612610_38612743_38613879_38613953_38614042_38614086_38614244_38614293_38614389_38614446_38616194_38616260_38617353_38617445_38617567_38617626_38617796
transcript_48494.nnic	chr19	-	528	6	NNC	ENSG00000104814.13	novel	2700	32	NA	NA	-383	0	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_2	32.2639117281213	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595488	True	NA	-3	True	AATAAA	-19	NA	38596113	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38589177_38589276_38593281_38593338_38595484_38595556_38595639_38595730_38596077
transcript_48497.nnic	chr19	-	493	6	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.1264762352609	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595488	True	NA	-3	True	AATAAA	-19	NA	38596113	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_48501.nic	chr19	-	538	5	ISM	ENSG00000104814.13	ENST00000591921.1	1625	18	13552	-59	-352	0	3prime_fragment	FALSE	canonical	3	26	junction_4	31.6464847968933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595457	True	NA	-3	True	AATAAA	-19	NA	38596082	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938
transcript_48502.nnic	chr19	-	442	5	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	22.8089894559141	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595500	True	NA	-3	True	AATAAA	-19	NA	38596125	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596077
transcript_48503.nnic	chr19	-	599	5	NIC	ENSG00000104814.13	novel	2631	31	NA	NA	577	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	40.7952203082665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596457	True	NA	-3	True	AATAAA	-19	NA	38596516	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596311
transcript_48506.nnic	chr19	-	350	4	NNC	ENSG00000104814.13	novel	443	5	NA	NA	-393	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	45.4923681023043	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595498	True	NA	-3	True	AATAAA	-19	NA	38596123	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38596077
transcript_48507.nnic	chr19	-	538	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-407	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	26.1661358757205	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595512	True	NA	-3	True	AATAAA	-19	NA	38596137	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595730_38596077
transcript_48509.nnic	chr19	-	475	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-484	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	19.8718114143852	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596155	False	NA	-3	True	AATAAA	-19	NA	38596214	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38595484_38595556_38595639_38595730_38596077
transcript_4851.known	chr1	+	1448	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	0	0	0	multi-exon	FALSE	canonical	1	208	junction_8	132.643083121586	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	75777593	True	NA	31	True	AATAAA	-24	NA	75786255	75795086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_48511.known	chr19	+	516	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	38596288	True	NA	11	True	AATACA	-17	NA	38596345	38601694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38596437_38597252_38597396_38601412
transcript_48513.nnic	chr19	-	469	3	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-394	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	8.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595499	True	NA	-3	True	AATAAA	-19	NA	38596124	38587640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38595484_38595730_38596077
transcript_48514.nic	chr19	+	1394	2	NIC	ENSG00000267291.1	novel	516	3	NA	NA	-62	0	intron_retention	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	NA	False	NA	11	True	AATACA	-17	NA	38596283	38601694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_38597396_38601412
transcript_48516.known	chr19	+	760	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	932.685589125974	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572355	True	NA	16	True	AATAAA	-16	NA	38619094	38636953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_48520.known	chr19	+	772	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	0	0	0	0	multi-exon	FALSE	canonical	3	2115	junction_7	263.201947762782	2933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	38572448	True	NA	17	True	AATAAA	-17	NA	38619187	38636954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_48528.known	chr19	+	1327	7	FSM	ENSG00000178982.10	ENST00000545173.6	1327	7	0	0	0	0	multi-exon	FALSE	canonical	3	2394	junction_1	188.733277404913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGTCTACACACATGTAA	38572453	True	NA	NA	False	ATTAAA	-14	NA	38619192	38635744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992
transcript_48530.known	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	920.778595658165	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572471	True	NA	16	True	AATAAA	-16	NA	38619210	38636953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
transcript_48534.known	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	969.971649070219	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	38572342	True	NA	18	True	AATAAA	-18	NA	38619081	38636955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_48543.known	chr19	+	501	5	FSM	ENSG00000178982.10	ENST00000588934.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1181.2813752447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTACTGTCTCCTCCCTG	38572446	True	NA	15	True	AATAAA	-15	NA	38619185	38636952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38636888
transcript_48544.known	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	32.8941864164475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	38611851	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_48545.known	chr19	+	2923	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	28.5367745199068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCCTCCGGGGTGGGT	38611862	True	NA	NA	False	NA	NA	NA	38647659	38729533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_48546.known	chr19	+	4958	21	FSM	ENSG00000130402.13	ENST00000440400.2	4958	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_18	42.4985587990934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTCAGTTTCCTTAC	38611862	True	NA	NA	False	AATATA	-11	NA	38647659	38731583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
transcript_48549.nic	chr19	-	1471	8	ISM	ENSG00000182472.9	ENST00000328867.9	3129	21	8768	0	-29	0	intron_retention	TRUE	canonical	3	7	junction_5	6.22699849077239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTTTTAATTCTTTC	-38735418	False	NA	-8	True	AATAAA	-33	NA	38735706	38730191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735369
transcript_48555.known	chr19	-	1046	6	FSM	ENSG00000182472.9	ENST00000594552.5	1046	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	6.55438784326958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735122	False	76	-3	True	AATAAA	-38	NA	38735410	38730186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369
transcript_48557.known	chr19	-	896	5	FSM	ENSG00000182472.9	ENST00000597987.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.5841423566947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACGGCAGAGATATGT	-38735117	False	NA	-90	True	NA	NA	NA	38735405	38730273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735369
transcript_48560.known	chr19	-	494	4	FSM	ENSG00000205076.5	ENST00000378626.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.2685791225499	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTGTCTGTGTCCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	38773517	38770967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38771140_38771828_38772031_38773014_38773104_38773486
transcript_48561.known	chr19	+	532	2	FSM	ENSG00000178934.5	ENST00000600304.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGACTGTGTCTGTGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	38790527	38791748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38790891_38791579
transcript_48562.known	chr19	+	499	4	FSM	ENSG00000178934.5	ENST00000314980.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.084944665313	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTGTCCCATTCA	NA	False	NA	NA	False	AATAAA	-20	NA	38789199	38791754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38789233_38789615_38789705_38790688_38790891_38791579
transcript_48565.known	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	437.817908305877	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-38804812	True	NA	1	True	AATAAA	-43	NA	38849986	38836369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_48567.known	chr19	-	1633	13	FSM	ENSG00000104824.18	ENST00000600873.5	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	580.438118770832	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTCCTTTTTTTTTT	-38850706	True	NA	-28	True	NA	NA	NA	38852338	38836634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_48571.known	chr19	-	1200	10	FSM	ENSG00000104823.9	ENST00000221418.9	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_8	64.5407326642602	1541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	-38821993	True	NA	NA	False	AATAAA	-14	NA	38831794	38815421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_48584.nnic	chr19	-	771	5	NNC	ENSG00000187994.14	novel	3058	12	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.8015030930605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTTGTGTGTGT	-38869960	False	NA	-5	True	ATTAAA	-22	NA	38870100	38867829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38867993_38869012_38869167_38869246_38869411_38869572_38869705_38869942
transcript_48588.nic	chr19	-	639	4	ISM	ENSG00000187994.14	ENST00000598904.5	1846	11	6681	0	-57	0	3prime_fragment	FALSE	canonical	3	32	junction_1	3.85861230093008	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	-38869960	False	NA	NA	False	AAAACA	-19	NA	38870100	38868981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942
transcript_48590.known	chr19	-	1810	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGTATGTTTGTGT	-38869242	True	NA	-9	True	ATTAAA	-18	NA	38870043	38867833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38869411_38869572_38869705_38869942
transcript_48591.known	chr19	-	1862	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	18.9215926038657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	-38898924	True	NA	-5	True	ATTAAA	-19	NA	38899618	38878559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
transcript_48592.known	chr19	-	2062	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	6.9045976991969	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-2	True	ATTAAA	-22	NA	38899862	38878556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_48595.known	chr19	+	1192	6	FSM	ENSG00000104825.17	ENST00000313582.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_5	52.9626283335712	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	38894890	True	NA	16	True	AATAAA	-21	NA	38899968	38908889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_48597.nic	chr19	+	1116	6	NIC	ENSG00000104825.17	novel	1192	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	136.589018592272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACCAGACTGATCTTGT	38894912	True	NA	18	True	AATAAA	-23	NA	38899990	38908891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_48599.known	chr19	+	1929	5	FSM	ENSG00000104825.17	ENST00000572515.5	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	28.9525473836069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	38894873	True	NA	NA	False	NA	NA	NA	38899951	38908538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398
transcript_48604.known	chr19	-	1924	16	FSM	ENSG00000104835.15	ENST00000221431.11	1924	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	97.2018289722758	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38924880	True	NA	-9	True	AATAAA	-14	NA	38930763	38915265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_48618.known	chr19	-	462	4	FSM	ENSG00000161243.9	ENST00000595166.1	462	4	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	9.7410927974683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTGTGTCTTTCGAACA	-39031116	False	NA	NA	False	NA	NA	NA	39031402	39025518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39025555_39026869_39027006_39031028_39031125_39031208
transcript_48619.known	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	204.5	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	38917310	True	NA	37	True	ATTAAA	-28	NA	38930943	38933168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38930999_38931275_38931344_38932332
transcript_48621.known	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	294.5	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	38917365	True	NA	26	True	AATAAA	-26	NA	38930998	38933020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38931172_38931275_38931344_38932332
transcript_48622.known	chr19	+	1220	2	FSM	ENSG00000128626.12	ENST00000407800.2	1220	2	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCACGGAGGGCTCTTTT	38917320	True	NA	31	True	ATTAAA	-22	NA	38930953	38933162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38931344_38932332
transcript_48624.nic	chr19	+	2837	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	159	junction_2	75.9338568576887	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116093	True	NA	5	True	ATTAAA	-15	NA	39125776	39179402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_48625.nic	chr19	+	2847	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	85.1931719283293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116093	True	NA	5	True	ATTAAA	-15	NA	39125776	39179402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_39125920_39168229_39168313_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_48628.known	chr19	+	2739	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	89.0216792416319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116118	True	NA	5	True	ATTAAA	-15	NA	39125801	39179402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_48630.known	chr19	-	614	7	FSM	ENSG00000130755.13	ENST00000597595.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.28521820013368	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	-39335971	False	NA	-1	True	AATAAA	-23	NA	39336043	39328358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335260_39335311_39335434_39335532_39335973
transcript_48632.known	chr19	-	173	1	FSM	ENSG00000269246.1	ENST00000599274.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGATCTGTGCG	-39341873	True	NA	-1	True	AATAAA	-19	NA	39341945	39341772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39341800_39341900
transcript_48633.known	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_10	15.4693818605634	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-39388227	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
transcript_48637.known	chr19	+	3590	4	FSM	ENSG00000063322.15	ENST00000315588.11	3590	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	24.5356882927706	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTCTTGTTTATAT	39385224	True	NA	93	True	ATTAAA	-15	NA	39391377	39400641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
transcript_48640.known	chr19	+	2941	3	FSM	ENSG00000063322.15	ENST00000599417.2	2941	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAAGGCCTGTATTT	39391202	False	NA	-77	True	NA	NA	NA	39391302	39399976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39391639_39393552_39393638_39397456
transcript_48642.known	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	39404036	True	NA	4	True	AATAAA	-15	NA	39406846	39409407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39406929_39407742
transcript_48643.known	chr19	+	1699	2	FSM	ENSG00000128016.7	ENST00000652583.1	1699	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTGGGCATTTTTAA	39404047	False	NA	-35	True	AATATA	-38	NA	39406857	39409368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39406933_39407744
transcript_48647.known	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	8683	junction_4	207.89104718578	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-39297445	True	NA	-17	True	AGTAAA	-15	NA	39435949	39433136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
transcript_48648.known	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	3601.52124108688	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	-39297437	True	NA	-24	True	AATAAA	-22	NA	39435941	39433216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
transcript_48649.known	chr19	-	407	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4280.40893685015	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCACTTGTATAATA	-39435538	False	NA	-67	True	NA	NA	NA	39435705	39433259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
transcript_48650.known	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	239.708619415786	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297432	True	NA	-14	True	AATAAA	-32	NA	39435936	39433206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
transcript_48651.known	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3874.72547414652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297411	True	NA	-14	True	AATAAA	-32	NA	39435915	39433206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
transcript_48652.known	chr19	-	2389	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	91.7327034862098	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-39297444	True	NA	-30	True	AATAAA	-16	NA	39435948	39433222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
transcript_48653.known	chr19	+	3698	29	FSM	ENSG00000196235.14	ENST00000402194.6	3698	29	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_4	133.815871629639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCGTGTGTGTGTGT	39445521	False	NA	27	True	AATAAA	-18	NA	39445545	39476666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_48654.known	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_13	78.2396566809378	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430251	True	NA	31	True	AATAAA	-22	NA	39445683	39476670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_48679.known	chr19	+	5037	11	FSM	ENSG00000105197.11	ENST00000607714.6	5037	11	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_6	78.5788775689752	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	39459779	True	NA	16	True	AATAAA	-16	NA	39480837	39493779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485543_39485603_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_48685.known	chr19	+	1481	10	FSM	ENSG00000105197.11	ENST00000601358.5	1481	10	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_4	423.230550368746	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCCCGAGAGTCTCCA	39480473	False	NA	15	True	AATAAA	-24	NA	39480483	39489928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_48695.known	chr19	+	786	4	FSM	ENSG00000105197.11	ENST00000599794.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	640.640825007794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCCCTCTGACCA	39459782	True	NA	-13	True	NA	NA	NA	39480840	39490119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39480962_39488060_39488218_39488538_39488646_39489718
transcript_48697.known	chr19	+	2004	9	FSM	ENSG00000090932.11	ENST00000356433.10	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	25.5828922328966	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGACTAACGAGGCTGA	39497941	True	NA	8	True	TATAAA	-18	NA	39498946	39508469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829_39507915_39508251
transcript_48699.known	chr19	+	1704	6	FSM	ENSG00000186838.14	ENST00000335426.8	1704	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.77493455452533	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTGGTCCCAGCTAT	39514591	False	NA	17	True	AATAAA	-24	NA	39515112	39520686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39516022_39518607_39518633_39518739_39518794_39518902_39518978_39519070_39519171_39520145
transcript_487.known	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	TRUE	canonical	3	368	junction_10	658.790717906681	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863123	True	NA	0	True	AATAAA	-20	NA	1891117	1785284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
transcript_48706.known	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_7	328.285317978127	2732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-39797634	True	NA	-9	True	ATTAAA	-14	NA	39846379	39834457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
transcript_48707.known	chr19	-	12787	28	FSM	ENSG00000275395.7	ENST00000616721.6	12787	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	5.39089309809254	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGTCTGTCTCAT	-39934437	False	NA	0	True	AATAAA	-20	NA	39934626	39863322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39863497_39863620_39863893_39866736_39867121_39870215_39870416_39872077_39872652_39873223_39873796_39875387_39875932_39876657_39877275_39877662_39878237_39879554_39879893_39883304_39883447_39885672_39885873_39885990_39886586_39889478_39890072_39891642_39892187_39892910_39893528_39893921_39894496_39895805_39896144_39899555_39899698_39901924_39902125_39902242_39902838_39905730_39906324_39913689_39914258_39915184_39915790_39918071_39918643_39924382_39924733_39927058_39928307_39934563
transcript_48710.known	chr19	+	1754	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	0	0	0	0	multi-exon	TRUE	canonical	3	791	junction_6	110.954945811352	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	39960594	True	NA	NA	False	NA	NA	NA	39971164	39981764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_48718.nnic	chr19	-	584	6	NNC	ENSG00000197782.15	novel	7500	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	39.540359128364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40089427	True	NA	1	True	AGTAAA	-36	NA	40090888	40076113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090747
transcript_48719.known	chr19	-	3472	6	FSM	ENSG00000197782.15	ENST00000595687.6	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	35.8586112391431	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGCACGTTTATTT	-40089427	True	NA	75	True	AATATA	-35	NA	40090888	40073179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
transcript_48720.known	chr19	-	467	6	FSM	ENSG00000197782.15	ENST00000601688.5	467	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	31.1897419033887	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACAACTCTTGGCATT	-40089477	True	NA	-8	True	AGTAAA	-27	NA	40090938	40076122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_48721.known	chr19	-	8687	5	FSM	ENSG00000128000.17	ENST00000434248.6	8687	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	16.7705098312484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCTTGCCATTTGAG	-40054350	True	NA	NA	False	AATAAA	-20	NA	40056231	40028259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40036627_40047374_40047471_40048669_40048797_40050323_40050378_40056188
transcript_48722.nic	chr19	-	490	5	NIC	ENSG00000128000.17	novel	401	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	16.7705098312484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	-40054336	True	NA	NA	False	AATAAA	-36	NA	40056217	40036530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_40036627_40047374_40047471_40048669_40048797_40050323_40050378_40056100
transcript_48724.nic	chr19	-	385	5	NIC	ENSG00000128000.17	novel	8687	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	20.7891197504849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	-40054350	True	NA	NA	False	AATAAA	-36	NA	40056231	40036530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_40036627_40047405_40047471_40048669_40048797_40050323_40050378_40056188
transcript_48725.known	chr19	-	546	5	FSM	ENSG00000197782.15	ENST00000595773.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	42.5499706227866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTTGCAATACACATAA	-40089477	True	NA	NA	False	NA	NA	NA	40090938	40075973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090905
transcript_48726.known	chr19	-	446	5	FSM	ENSG00000197782.15	ENST00000601715.5	446	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	36.7287353444139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40088774	False	NA	1	True	AGTAAA	-36	NA	40090235	40076113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165
transcript_48728.known	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	10.5538910068569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-40275777	True	NA	-1	True	AATAAA	-18	NA	40285345	40230316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_48729.known	chr19	-	1795	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	17.065844706769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTCGCATTTGGAAG	-40275805	True	NA	NA	False	NA	NA	NA	40285373	40233669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
transcript_48731.known	chr19	+	1906	13	FSM	ENSG00000105223.20	ENST00000356508.9	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	584.207648348504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343122	True	NA	14	True	AGTAAA	-14	NA	40348699	40378483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40348725_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_48736.nic	chr19	+	2323	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	351	junction_1	359.951810046228	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343094	True	NA	14	True	AGTAAA	-14	NA	40348671	40378483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_48737.nic	chr19	+	2204	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	443.971306317574	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343104	True	NA	14	True	AGTAAA	-14	NA	40348681	40378483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40348769_40365661_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_48739.known	chr19	+	2137	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	417.839175268295	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCCTGACTGAGTGG	40343117	True	NA	16	True	AGTAAA	-16	NA	40348694	40378485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_48746.known	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	27.4226184016042	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	-40347048	True	NA	-15	True	AATATA	-18	NA	40348386	40321062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
transcript_48747.known	chr19	-	3611	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.6619037896906	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	-40347059	True	NA	NA	False	NA	NA	NA	40348397	40319535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
transcript_48748.known	chr19	-	3628	9	FSM	ENSG00000160392.14	ENST00000582783.5	3628	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	32.566998249762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	NA	False	NA	NA	False	NA	NA	NA	40348527	40319535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348436
transcript_48753.known	chr19	+	1966	12	FSM	ENSG00000105223.20	ENST00000409419.5	1966	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	469.768186194351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	40343100	True	NA	6	True	AGTAAA	-6	NA	40348677	40378475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40348769_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_48754.nic	chr19	-	800	5	NIC	ENSG00000105227.16	novel	475	3	NA	NA	-36	20	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	4.58257569495584	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTGTCTAAACACACAC	-40412756	True	NA	NA	False	AATAAA	-28	NA	40413414	40407265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_40407720_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_48755.known	chr19	+	588	1	FSM	ENSG00000277453.1	ENST00000614440.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATCTTCAGAGTGGG	40426103	False	NA	NA	False	ATTAAA	-9	NA	40426114	40426702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40426100_40426700
transcript_48756.known	chr19	-	1364	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	-40441495	True	NA	42	True	AATAAA	-17	NA	40444335	40440843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40442087_40444214
transcript_48757.known	chr19	-	747	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTTGGGAGTGGAATG	-40443984	False	2840	NA	False	NA	NA	NA	40444062	40441547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40442087_40443854
transcript_48759.known	chr19	-	799	5	FSM	ENSG00000090013.11	ENST00000263368.9	799	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	157.992088409515	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCTGTCTGAGTA	-40463291	True	NA	16	True	NA	NA	NA	40465745	40447767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40448047_40451363_40451493_40458154_40458245_40458380_40458546_40465609
transcript_48760.known	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	186.70632019297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	-40463305	True	NA	-11	True	AATAAA	-30	NA	40465759	40447794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
transcript_48761.known	chr19	-	649	4	FSM	ENSG00000090013.11	ENST00000595483.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.481116747501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTGTGTGACTCTTCCT	-40463291	True	NA	-5	True	AATAAA	-36	NA	40465745	40447788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40448047_40458154_40458245_40458380_40458546_40465609
transcript_48765.known	chr19	+	525	4	FSM	ENSG00000160460.17	ENST00000599926.5	525	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.79271573232759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAACACTGAGGACGC	40570901	True	NA	NA	False	NA	NA	NA	40571038	40575663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40571094_40572018_40572193_40572337_40572381_40575410
transcript_48766.known	chr19	+	712	4	FSM	ENSG00000160460.17	ENST00000593816.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCGCACTGTGGGC	40570908	True	NA	NA	False	NA	NA	NA	40571045	40575605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40571094_40572018_40572193_40572337_40572633_40575410
transcript_48772.known	chr19	+	2341	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_12	33.4805629714587	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	40574213	True	NA	15	True	AATAAA	-15	NA	40576872	40591397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_48776.known	chr19	+	1993	16	FSM	ENSG00000160410.15	ENST00000600718.5	1993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	119.065173562867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCCCCAATAAAGTCCT	40574256	False	NA	-14	True	NA	NA	NA	40576915	40591368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40590729_40590854_40590975
transcript_48778.nnic	chr19	+	2050	15	NIC	ENSG00000160410.15	novel	2284	18	NA	NA	-10	0	combination_of_known_splicesites	TRUE	canonical	3	22	junction_9	117.373901072859	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	40576705	False	NA	15	True	AATAAA	-15	NA	40576842	40591397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_48779.known	chr19	-	2297	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	54.9405335087149	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715275	True	NA	12	True	AATAAA	-33	NA	40716882	40691513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_48780.known	chr19	-	2237	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	48.4473204330524	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40714979	False	1607	12	True	AATAAA	-33	NA	40714990	40691513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_48782.known	chr19	-	2201	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	46.2085445760493	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715087	False	1607	12	True	AATAAA	-33	NA	40715098	40691513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
transcript_48783.known	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	38.5687829780532	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40715279	True	NA	-4	True	AATAAA	-17	NA	40716886	40691529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_48784.known	chr19	-	2194	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_14	42.0031582874723	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715289	True	NA	12	True	AATAAA	-33	NA	40716896	40691513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_48786.known	chr19	-	2270	15	FSM	ENSG00000123815.13	ENST00000678316.1	2270	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	60.9644007865681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40716711	False	1607	12	True	AATAAA	-33	NA	40716722	40691513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705349_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_48792.known	chr19	-	2335	14	FSM	ENSG00000123815.13	ENST00000679002.1	2335	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	43.4765801064375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715287	True	NA	12	True	AATAAA	-33	NA	40716894	40691513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_48804.nic	chr19	+	1231	7	NIC	ENSG00000077312.9	novel	1277	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	595.407540167984	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	NA	False	NA	37	True	ATTAAA	-30	NA	40750839	40765389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40750978_40751386_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_48806.nic	chr19	+	1188	7	NIC	ENSG00000077312.9	novel	1277	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	605.059891434081	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	NA	False	NA	37	True	ATTAAA	-30	NA	40750842	40765389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40750938_40751386_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_48809.known	chr19	+	969	6	FSM	ENSG00000077312.9	ENST00000601393.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	652.032943952988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCCAAGAAGTAGCAC	40736405	True	NA	NA	False	NA	NA	NA	40751208	40765150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40751482_40757331_40757442_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_48810.known	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1551	junction_5	57.6180527265544	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	40736399	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_48812.known	chr19	-	3302	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	31.0251510874645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40747792	True	NA	-9	True	AATAAA	-14	NA	40750477	40740860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
transcript_48813.known	chr19	-	2521	6	FSM	ENSG00000188493.15	ENST00000470681.5	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	52.1022072469104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-40747807	True	NA	-4	True	AATAAA	-19	NA	40750492	40740855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_48824.known	chr19	+	1159	8	FSM	ENSG00000167578.18	ENST00000357052.8	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	25.4109087935533	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCCTCCATTATTG	40776095	True	NA	8	True	CATAAA	-17	NA	40778246	40796942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_48827.known	chr19	+	890	7	FSM	ENSG00000167578.18	ENST00000378307.9	890	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	106.976113637059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCCTGTCCAGCACCC	40776157	False	NA	-44	True	NA	NA	NA	40778308	40796890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40786664_40786761_40786847_40786979_40796569
transcript_48834.known	chr19	+	2100	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	900	junction_1	67.1702315017598	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	40791709	True	NA	23	True	AATAAA	-22	NA	40799190	40808434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_48835.known	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	417.518574437114	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40799498	False	NA	21	True	AATAAA	-20	NA	40799514	40808432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_48836.nic	chr19	+	2211	6	NIC	ENSG00000269858.6	novel	2150	6	NA	NA	7	0	intron_retention	FALSE	canonical	3	21	junction_1	410.742060178891	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40799505	False	NA	21	True	AATAAA	-20	NA	40799521	40808432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40799707_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_48838.nnic	chr19	+	1000	5	NNC	ENSG00000269858.6	novel	3034	4	NA	NA	-103	0	intron_retention	FALSE	canonical	2	68	junction_1	414.452274091963	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40803909	True	NA	21	True	AATAAA	-20	NA	40803969	40808432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_40804021_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_48843.known	chr19	-	1004	3	FSM	ENSG00000237118.3	ENST00000641827.1	1004	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATGAGAGTCATTTA	NA	False	NA	NA	False	ATTAAA	-1	NA	40826471	40818413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40818900_40825119_40825262_40826095
transcript_48844.known	chr19	+	3071	9	FSM	ENSG00000197408.10	ENST00000324071.10	3071	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.2710098864544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATCTGTGCCATTTT	NA	False	NA	21	True	AATAAA	-31	NA	40991281	41018398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40991477_41004000_41004164_41004296_41004447_41006904_41007066_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
transcript_48847.known	chr19	+	1426	5	FSM	ENSG00000197408.10	ENST00000593831.1	1426	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33.4776044543214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCACATAACATAAAAT	41002782	True	NA	NA	False	TTTAAA	-11	NA	41003945	41017373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41004164_41004296_41004447_41012297_41012486_41012673_41012816_41016645
transcript_48849.known	chr19	+	2612	9	FSM	ENSG00000167600.14	ENST00000310054.9	2612	9	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_5	81.8725190463809	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178677	True	NA	18	True	ATTAAA	-24	NA	41193218	41207539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_48850.nnic	chr19	+	2463	9	NNC	ENSG00000167600.14	novel	510	3	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	458.598885192714	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41193965	True	NA	18	True	ATTAAA	-24	NA	41193976	41207539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_41194051_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_48856.nic	chr19	+	2112	6	NIC	ENSG00000167600.14	novel	2612	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	691.627529816447	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178648	True	NA	18	True	ATTAAA	-24	NA	41193189	41207539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_41193442_41194543_41194710_41197778_41197929_41201230_41201373_41205957_41206100_41206279
transcript_48857.known	chr19	+	1479	6	FSM	ENSG00000167600.14	ENST00000593545.5	1479	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	567.934503266002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCACAGGGAACAGCAT	41178697	True	NA	NA	False	NA	NA	NA	41193238	41206917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41193442_41194543_41194710_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_48858.nic	chr19	+	1374	5	ISM	ENSG00000167600.14	ENST00000310054.9	2612	9	-29	8186	-20	-1946	5prime_fragment	FALSE	canonical	3	1328	junction_2	69.9589165153378	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACAATATTTCTTTTC	41178648	True	NA	5	True	AATAAA	-20	NA	41193189	41199353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708
transcript_48859.nic	chr19	+	1962	5	NIC	ENSG00000167600.14	novel	2612	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	730.577340190619	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178648	True	NA	18	True	ATTAAA	-24	NA	41193189	41207539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_41193442_41194543_41194710_41201230_41201373_41205957_41206100_41206279
transcript_48860.nic	chr19	+	1937	5	NIC	ENSG00000167600.14	novel	2612	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	612.319156976164	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178695	True	NA	18	True	ATTAAA	-24	NA	41193236	41207539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_41193442_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_48861.known	chr19	+	4717	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_9	26.3368336909406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	41216336	True	NA	17	True	CATAAA	-18	NA	41219222	41261766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_48862.known	chr19	+	3206	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	14.8578656892404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTTTTTTTTTTTTT	41216348	True	NA	8	True	ATTAAA	-19	NA	41219234	41260294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_48863.known	chr19	+	3426	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_13	293.530932208627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	41253471	True	NA	17	True	NA	NA	NA	41262495	41307598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_48865.known	chr19	+	2794	15	FSM	ENSG00000105323.18	ENST00000595018.5	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	211.008620096673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	41253494	True	NA	18	True	NA	NA	NA	41262518	41307019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_48877.known	chr19	+	1742	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	0	0	0	0	multi-exon	TRUE	canonical	3	426	junction_5	30.0166620396073	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	41393453	True	NA	32	True	AATAAA	-26	NA	41397817	41425002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_48884.known	chr19	-	998	6	FSM	ENSG00000077348.10	ENST00000221233.9	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_2	27.1705723163867	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTGTTGAGCACCC	-41393799	True	NA	-16	True	AATAAA	-15	NA	41397359	41386373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41392866_41392981_41397180
transcript_48891.known	chr19	+	3329	5	FSM	ENSG00000142039.4	ENST00000269967.4	3329	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	18.5792222657462	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTATACGTAAATTTG	41306963	True	NA	14	True	ATTAAA	-16	NA	41310171	41324873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322594
transcript_48897.known	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	252.881889426665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	-41393782	True	NA	-57	True	NA	NA	NA	41397342	41386414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
transcript_48901.known	chr19	+	1080	4	FSM	ENSG00000142046.15	ENST00000392002.7	1080	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	14.6590889515307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376492	True	NA	8	True	ATTAAA	-24	NA	41376532	41384083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383714
transcript_48902.known	chr19	+	725	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	9.17726659862414	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376515	True	NA	8	True	ATTAAA	-24	NA	41376739	41384083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
transcript_48903.known	chr19	+	864	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	13.2748718344933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376537	False	NA	8	True	ATTAAA	-24	NA	41376577	41384083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
transcript_48904.known	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	4.96655480858378	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-41363854	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
transcript_48905.known	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	41376548	True	NA	-15	True	ATTAAA	-1	NA	41376772	41384060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771
transcript_48907.known	chr19	-	421	3	FSM	ENSG00000123810.9	ENST00000601597.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	20	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGAGCCTGTTTCTT	-41363797	True	NA	-3	True	AATAAA	-16	NA	41364092	41361009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41361204_41363431_41363524_41363957
transcript_48908.known	chr19	+	3043	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	268.991161375163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	41251410	True	NA	49	True	ATTAAA	-29	NA	41264410	41307050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_48909.known	chr19	+	3925	15	FSM	ENSG00000105323.18	ENST00000392006.8	3925	15	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	174.475072776624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	41251371	True	NA	7	True	ATTAAA	-17	NA	41264371	41307787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_48910.known	chr19	+	721	4	FSM	ENSG00000142046.15	ENST00000447302.6	721	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.0485374896143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376508	True	NA	8	True	ATTAAA	-24	NA	41376732	41384083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383873
transcript_48915.known	chr19	-	1065	6	FSM	ENSG00000105341.19	ENST00000417807.7	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	153.108327663782	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGGCTGTTAGTA	-41434780	False	4759	NA	False	NA	NA	NA	41439539	41431987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_48916.known	chr19	-	1700	6	FSM	ENSG00000105341.19	ENST00000221943.14	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	21.4046723871215	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435153	True	NA	-2	True	ATTAAA	-19	NA	41439912	41431317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_48921.known	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	144.722795371013	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	-41435177	True	NA	-23	True	NA	NA	NA	41439936	41431338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
transcript_48924.known	chr19	-	979	5	FSM	ENSG00000105341.19	ENST00000589970.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	164.140945531577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACTACTGACACTTT	-41435149	True	NA	NA	False	NA	NA	NA	41439908	41431871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_48926.nic	chr19	-	2589	5	NIC	ENSG00000105341.19	novel	1700	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	356	junction_4	23.4200768572607	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGGTTTTTCTCTCC	NA	False	NA	-3	True	ATTAAA	-18	NA	41439939	41431318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_48927.nic	chr19	-	829	5	ISM	ENSG00000105341.19	ENST00000221943.14	1700	6	-27	1761	-3	145	5prime_fragment	FALSE	canonical	3	356	junction_4	23.4200768572607	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTTGTTTTAGTCAA	NA	False	NA	-18	True	ATTAAA	-16	NA	41439939	41433078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_48928.known	chr19	-	541	5	FSM	ENSG00000105341.19	ENST00000589102.1	541	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	193.248544625826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACCTCCAGTGAGACC	-41435151	True	NA	NA	False	NA	NA	NA	41439910	41433283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41433435_41433536_41433674_41436428_41436473_41438234_41438415_41439881
transcript_48930.known	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	154.169459434164	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435151	True	NA	-2	True	ATTAAA	-19	NA	41439910	41431317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
transcript_48931.known	chr19	-	572	4	FSM	ENSG00000105341.19	ENST00000595425.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	158.539865298571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCCAGATGCAGGAGAG	-41435149	True	NA	NA	False	NA	NA	NA	41439908	41433223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41433435_41433536_41433674_41438217_41438415_41439881
transcript_48934.nnic	chr19	+	1174	4	NNC	ENSG00000270164.2	novel	411	3	NA	NA	-24	3984	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	0.816496580927726	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAGCTGACTTTAGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	41535541	41540888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_41535602_41535713_41535784_41537096_41537264_41540011
transcript_48935.nic	chr19	+	435	3	FSM	ENSG00000270164.2	ENST00000685659.1	411	3	-24	0	-24	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACGTGTGATTTGATTT	NA	False	NA	NA	False	AATAAA	-21	NA	41535541	41536902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41535602_41535713_41535784_41536597
transcript_48936.known	chr19	+	409	3	FSM	ENSG00000270164.2	ENST00000494375.2	409	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTGATTTGATTTTT	41535504	True	NA	NA	False	AATAAA	-23	NA	41535566	41536904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41535602_41535713_41535784_41536600
transcript_48937.known	chr19	+	467	3	FSM	ENSG00000270164.2	ENST00000483481.2	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTGATTTGATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	41535497	41536904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41535602_41535727_41535784_41536597
transcript_48939.known	chr19	+	500	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17055.9203750487	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41589543	True	NA	34	True	AATAAA	-16	NA	41860256	41871416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_48940.known	chr19	+	668	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	16889.7345201161	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41589541	True	NA	34	True	AATAAA	-16	NA	41860254	41871416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_48941.known	chr19	+	526	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17018.4313072621	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41859939	True	NA	34	True	AATAAA	-16	NA	41860445	41871416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_48944.known	chr19	+	2021	6	FSM	ENSG00000105372.8	ENST00000598742.6	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	28576	junction_5	7588.09788023323	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTGTTTACACTCAGCAA	41589541	True	NA	13	True	AATAAA	-14	NA	41860254	41872925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860290_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_48945.nnic	chr19	+	1207	7	Fusion	ENSG00000105369.10_ENSG00000105372.8	novel	2021	6	NA	NA	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	17876.6253410238	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCAGGAGTCGTGG	41589535	True	NA	5	True	AATAAA	-16	NA	41860248	41881372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_41860290_41860774_41860846_41861111_41861213_41878989_41879290_41879534_41879654_41880669_41880739_41880866
transcript_48946.known	chr19	+	1099	5	FSM	ENSG00000105369.10	ENST00000221972.8	1099	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCAGGAGTCGTGG	41877267	False	NA	5	True	AATAAA	-16	NA	41877278	41881372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41877384_41878989_41879290_41879534_41879654_41880669_41880739_41880866
transcript_48947.known	chr19	+	3229	29	FSM	ENSG00000076928.18	ENST00000354532.8	3229	29	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	41.6730930418354	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	41880480	True	NA	22	True	AATATA	-16	NA	41883183	41907452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_48948.known	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	43.6197039355905	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41882935	True	NA	24	True	AATATA	-18	NA	41884447	41907454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_48949.known	chr19	+	3091	28	FSM	ENSG00000076928.18	ENST00000347545.8	3091	28	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	57.5003548626254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41880521	True	NA	24	True	AATATA	-18	NA	41883224	41907454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_48952.known	chr19	-	653	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	682.05255479325	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	-41949186	True	NA	-7	True	AATAAA	-28	NA	41959266	41956680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_48953.known	chr19	-	728	5	FSM	ENSG00000105404.11	ENST00000601078.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	696.189090693039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTCTGCTGCTCGGGCC	-41949195	True	NA	-107	True	NA	NA	NA	41959275	41956780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959114
transcript_48954.known	chr19	-	750	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_2	155.803361645377	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCCAGCATCTTCTG	-41949241	True	NA	-9	True	AATAAA	-26	NA	41959321	41956682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_48958.known	chr19	-	628	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	813.533991641133	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	-41949219	True	NA	-7	True	AATAAA	-28	NA	41959299	41956680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
transcript_48962.nnic	chr19	-	2443	15	NNC	ENSG00000105737.10	novel	2101	15	NA	NA	646	462	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	20.3556390421997	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGCAGCCCTGAGGGC	-42068254	False	NA	-32	True	AATAAA	-30	NA	42069560	42020868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_42021185_42021300_42021475_42021946_42022057_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
transcript_48963.known	chr19	+	3087	2	FSM	ENSG00000105732.13	ENST00000359044.5	3087	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAGTGGAATTTGG	42069556	True	NA	20	True	AATAAA	-17	NA	42076165	42081552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42076287_42078586
transcript_48965.nic	chr19	-	1459	8	ISM	ENSG00000105723.13	ENST00000398249.8	3524	10	5219	0	42	0	3prime_fragment	FALSE	canonical	3	365	junction_1	33.3380948980078	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	-42236648	False	NA	-5	True	AATAAA	-16	NA	42236674	42230189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605
transcript_48969.known	chr19	-	555	4	FSM	ENSG00000105722.10	ENST00000593944.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	30.2140511829991	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGTGGTGGCCCGCCG	-42253885	False	4296	NA	False	NA	NA	NA	42253899	42249592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42253841
transcript_48970.known	chr19	+	3982	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	42218358	True	NA	NA	False	NA	NA	NA	42220311	42228201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42220388_42224214_42224306_42224386
transcript_48971.nnic	chr19	-	1525	3	NIC	ENSG00000160570.14	novel	1905	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	118	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-42214971	True	NA	-8	True	ATTAAA	-28	NA	42217783	42198597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_42199830_42209699_42209841_42217631
transcript_48973.known	chr19	-	1586	4	FSM	ENSG00000160570.14	ENST00000593804.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	69.0909223817106	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCATAGGTGGGCATC	-42214930	True	NA	-26	True	ATTAAA	-10	NA	42217742	42198615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42217631
transcript_48974.known	chr19	-	1098	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_5	218.972692361399	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	-42302276	False	NA	-22	True	ATTAAA	-17	NA	42302777	42297032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_48977.known	chr19	-	582	6	FSM	ENSG00000079462.8	ENST00000595530.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	364.652930880858	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCGGGCCCACTTCC	-42302269	False	NA	NA	False	NA	NA	NA	42302770	42297279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_48980.known	chr19	-	465	6	FSM	ENSG00000079462.8	ENST00000596265.5	465	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	453.281104834516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAACGAGCTGGTAC	-42302227	False	NA	NA	False	NA	NA	NA	42302728	42297315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42300008_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_48986.known	chr19	-	1054	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	45.2493093869951	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTTCCTGCTTTAT	-42302123	False	798	-24	True	ATTAAA	-15	NA	42302624	42297034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
transcript_48993.known	chr19	-	649	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	407.096042108002	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTTCCTGCTTTA	-42301791	False	NA	-25	True	ATTAAA	-14	NA	42302292	42297035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
transcript_49.known	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	752	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00136_+_0_1000
transcript_490.known	chr1	-	1118	2	FSM	ENSG00000178821.13	ENST00000378602.3	1118	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCTATGTGGGAAGGA	-1918784	False	NA	-8	True	AATAAA	-18	NA	1918797	1917589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1918163_1918252
transcript_49000.known	chr19	+	1523	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	42301886	True	NA	3	True	AATAAA	-16	NA	42302131	42310814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42302504_42309578_42310186_42310270
transcript_49002.known	chr19	+	1641	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	42302074	True	NA	2	True	AATAAA	-15	NA	42302097	42310813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42302504_42309578
transcript_49003.known	chr19	+	1797	15	FSM	ENSG00000167619.13	ENST00000301204.8	1797	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.90938293641131	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTCTTTTGCATCTT	42312981	True	NA	21	True	AATAAA	-24	NA	42313308	42325064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791_42314852_42314992_42315078_42315187_42315260_42315371_42315441_42316480_42316562_42316661_42316741_42316869_42316964_42317708_42317882_42320316_42320438_42323582_42323790_42324736
transcript_49004.nic	chr19	-	385	2	ISM	ENSG00000105427.10	ENST00000222032.10	533	4	2797	0	2768	0	3prime_fragment	FALSE	canonical	3	269	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTACATCCATTTTG	-42384630	True	NA	0	True	AATAAA	-15	NA	42387500	42387018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_42387243_42387339
transcript_49006.nnic	chr19	+	660	3	NNC	ENSG00000213904.10	novel	723	5	NA	NA	0	31879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	42396716	True	NA	6	True	AATAAA	-18	NA	42397158	42557748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_42397225_42485095_42485224_42557282
transcript_49007.known	chr19	+	292	2	FSM	ENSG00000213904.10	ENST00000593491.3	306	2	14	0	14	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGCTCTCGGCTGGT	42396685	True	NA	15	True	AGTAAA	-27	NA	42397127	42408452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42397225_42408257
transcript_49008.known	chr19	+	251	2	FSM	ENSG00000213904.10	ENST00000599276.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGCTGGGCATAGCT	42401139	False	NA	5	True	AGTAAA	-17	NA	42401581	42408442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42401648_42408257
transcript_49009.known	chr19	-	301	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	114	306	114	-306	multi-exon	TRUE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGAAAAGGCCCTG	-43331292	False	NA	NA	False	NA	NA	NA	43331430	43329294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43329509_43331343
transcript_49011.known	chr19	+	2195	9	FSM	ENSG00000204936.10	ENST00000618265.5	2195	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.56852560590505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTTCTATACGCAATT	43353537	True	NA	7	True	CATAAA	-24	NA	43353685	43363172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43353767_43353852_43353994_43354206_43354393_43355660_43355784_43355991_43356109_43360264_43360406_43361142_43361329_43361444_43361580_43362087
transcript_49012.known	chr19	-	1642	5	FSM	ENSG00000124466.9	ENST00000244333.4	1642	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.15454401062709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-43465595	False	NA	-11	True	AATAAA	-23	NA	43465608	43460786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43461848_43463125_43463288_43463598_43463770_43464324_43464457_43465492
transcript_49013.nic	chr19	-	1299	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	600	-1014	600	0	3prime_fragment	FALSE	canonical	3	21	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-43463084	True	NA	-11	True	AATAAA	-23	NA	43463363	43460786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_43461848_43463125
transcript_49016.nnic	chr19	-	905	7	NNC	ENSG00000105755.8	novel	920	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	37.9473319220206	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525726	True	NA	0	True	AATAAA	-17	NA	43527219	43506718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526317_43526514_43526660_43527096
transcript_49017.nic	chr19	-	1135	7	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	37.6282990432585	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525763	True	NA	0	True	AATAAA	-17	NA	43527256	43506718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43526936
transcript_49018.known	chr19	-	920	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	12.9957257930786	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525708	True	NA	0	True	AATAAA	-17	NA	43527201	43506718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
transcript_49020.known	chr19	-	702	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	36.9345366831642	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	-43525712	True	NA	-73	True	NA	NA	NA	43527205	43506791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
transcript_49022.nnic	chr19	-	641	5	NIC	ENSG00000105755.8	novel	920	7	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	45.8911756223351	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525723	True	NA	0	True	AATAAA	-17	NA	43527216	43506718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
transcript_49025.known	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_15	26.8511522099146	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-43573051	True	NA	-18	True	AATAAA	-17	NA	43575527	43543310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_49028.known	chr19	+	569	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	40.077702307171	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580059	True	NA	13	True	TATAAA	-17	NA	43580543	43582098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
transcript_49030.known	chr19	+	557	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	38.19249489974	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580153	True	NA	13	True	TATAAA	-17	NA	43580637	43582098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
transcript_49032.known	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	43581026	False	NA	19	True	TATAAA	-23	NA	43581036	43582104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43581365_43581562_43581704_43581867
transcript_49033.known	chr19	+	867	3	FSM	ENSG00000124444.16	ENST00000533118.5	867	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	69	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGGGAAGGGAGTG	43596467	False	NA	93	True	NA	NA	NA	43596479	43599494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43596586_43597096_43597194_43598830
transcript_49034.known	chr19	+	830	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	61	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGCTTCAGTCTTTGG	43594788	True	NA	13	True	AATAAA	-21	NA	43596594	43599414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43596744_43597096_43597194_43598830
transcript_49038.known	chr19	+	859	3	FSM	ENSG00000124444.16	ENST00000528387.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTCCCTTATT	43596562	False	NA	NA	False	NA	NA	NA	43596574	43599525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43596639_43597093_43597194_43598830
transcript_49040.known	chr19	-	1162	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	16	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGTGCTGGGTGAGT	-43617629	True	NA	-1	True	AATAGA	-18	NA	43619629	43607223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43608108_43614228_43614435_43619557
transcript_49041.known	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.9443741208437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	-43670151	False	NA	NA	False	AATAAA	-16	NA	43670166	43646094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_49047.nic	chr19	-	1810	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	20.6700266085944	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-43667738	True	NA	-15	True	CATAAA	-18	NA	43668322	43648578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
transcript_49051.nic	chr19	-	1348	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	23.8537208837531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-43667776	True	NA	-15	True	CATAAA	-18	NA	43668360	43648578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668276
transcript_49052.known	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	14.5344418537486	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-43670154	False	NA	-15	True	CATAAA	-18	NA	43670169	43648578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_49056.known	chr19	-	1610	6	FSM	ENSG00000011422.12	ENST00000221264.8	1610	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	22.5707775674654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	NA	False	NA	-16	True	CATAAA	-17	NA	43670547	43648579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43649144_43652224_43652372_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_49059.known	chr19	-	5491	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	14.7515920312223	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGATTGGTCTCTAT	-43753551	True	NA	NA	False	AATAAA	-29	NA	43754962	43727982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_49064.nic	chr19	-	2816	5	Fusion	ENSG00000176222.9_ENSG00000267058.1	novel	1849	3	NA	NA	-24	0	multi-exon	FALSE	canonical	3	12	junction_3	2.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTATGAGTGTGATATT	-43901074	True	NA	-6	True	AATAAA	-15	NA	43901829	43872364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_43874078_43880009_43880137_43883955_43884052_43900867_43900955_43901036
transcript_49068.known	chr19	-	504	2	FSM	ENSG00000267058.1	ENST00000591815.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTGAAAGAGGAAAGAATT	-43900756	False	NA	NA	False	AAAAAG	-2	NA	43901511	43900917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43900955_43901044
transcript_49069.known	chr19	-	2193	3	FSM	ENSG00000267058.1	ENST00000587128.1	2193	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACACCTTTTATTTTTTC	-43901050	True	NA	NA	False	AATAAA	-21	NA	43901805	43891803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43893141_43900867_43900955_43901036
transcript_49070.known	chr19	+	2382	5	FSM	ENSG00000159905.15	ENST00000587682.6	2382	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.29128784747792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTGATCCGCCCGCCTT	43950157	True	NA	NA	False	NA	NA	NA	43951227	43967709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43951401_43962724_43962808_43964949_43965077_43965232_43965326_43965803
transcript_49074.known	chr19	+	2612	5	FSM	ENSG00000204920.11	ENST00000270014.7	2612	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.39509972887452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	43983862	True	NA	21	True	ATTAAA	-18	NA	43984187	43998326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_49075.known	chr19	+	1888	5	FSM	ENSG00000204920.11	ENST00000590615.5	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	10.4731800328267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTACCTCAAACATTT	43983891	True	NA	NA	False	NA	NA	NA	43984216	43997554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984323_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_49077.known	chr19	+	4104	5	FSM	ENSG00000159882.13	ENST00000429154.7	4104	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	4.03112887414927	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTAAGTTCACAATG	44002649	True	NA	NA	False	AATAAA	-18	NA	44002956	44013924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44003108_44007010_44007094_44008789_44008917_44009083_44009171_44010268
transcript_49079.known	chr19	+	1794	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAACTGCCATATTAT	44002651	True	NA	NA	False	AATAAA	-1	NA	44002958	44004752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44003000_44004800
transcript_49080.nic	chr19	+	1721	5	NIC	ENSG00000159885.14	novel	1614	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.8613807855649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	44025067	True	NA	NA	False	ATTAAA	-22	NA	44025332	44033110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_44025479_44026025_44026087_44027022_44027150_44027397_44027491_44031816
transcript_49081.known	chr19	+	2399	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.82842712474619	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGTTTCTGGAAT	44051247	True	NA	NA	False	AATAAA	-27	NA	44052035	44067999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
transcript_49082.known	chr19	+	1614	4	FSM	ENSG00000159885.14	ENST00000391960.4	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	44025113	True	NA	NA	False	ATTAAA	-22	NA	44025378	44033110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44025479_44027022_44027150_44027397_44027491_44031816
transcript_49084.nic	chr19	+	1555	3	NIC	ENSG00000159885.14	novel	1598	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	44025079	True	NA	NA	False	ATTAAA	-22	NA	44025344	44033110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_44025479_44027022_44027150_44031816
transcript_49085.known	chr19	+	3980	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1697408250678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGCATTTT	44093819	True	NA	65	True	AATGAA	-26	NA	44094391	44109886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_49088.known	chr19	-	3199	2	FSM	ENSG00000186019.12	ENST00000592946.1	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTACTCTTCCTAGTGA	-44112685	True	NA	NA	False	AATAAA	-43	NA	44113145	44105462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44108338_44112821
transcript_49090.known	chr19	+	1552	1	FSM	ENSG00000267680.6	ENST00000589060.1	1552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTTTTTATTACCTA	44093817	True	NA	NA	False	AAAAAG	-3	NA	44094389	44095941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44094400_44095900
transcript_49092.known	chr19	+	2292	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	13.6293800299207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAACAGAA	44140607	True	NA	NA	False	NA	NA	NA	44141556	44158119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_49094.known	chr19	+	4607	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.7284189330612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	44140604	True	NA	NA	False	ATTAAA	-25	NA	44141553	44160313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_49096.known	chr19	+	447	7	FSM	ENSG00000167380.17	ENST00000588742.5	447	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	52.5814183486482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGATTTGAAGTTAGAA	44163826	True	NA	NA	False	NA	NA	NA	44165103	44175033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_49097.known	chr19	+	567	7	FSM	ENSG00000167380.17	ENST00000588127.5	567	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	49.1211653861031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAATTTCTGAAGATGA	44163838	True	NA	NA	False	NA	NA	NA	44165115	44175679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_491.known	chr1	-	935	5	FSM	ENSG00000178821.13	ENST00000310991.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	25.7147817412476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	-1919266	False	NA	-9	True	AATAAA	-17	NA	1919279	1917590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1918163_1918252_1918432_1918892_1918935_1919044_1919089_1919181
transcript_49104.known	chr19	+	716	6	FSM	ENSG00000167380.17	ENST00000413984.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	49.8702316016278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTAAACTGTGAGCA	44163825	True	NA	-87	True	NA	NA	NA	44165102	44175158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_49105.known	chr19	+	576	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	43.1342091616387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAATCAGAAGAA	44163823	True	NA	NA	False	NA	NA	NA	44165100	44175530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_49107.known	chr19	+	817	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	45.5543631280254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	44163826	True	NA	NA	False	ATTAAA	-16	NA	44165103	44175429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_49109.known	chr19	+	579	6	FSM	ENSG00000167380.17	ENST00000585678.5	579	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	37.7391043878892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGATGGTCCCAA	44163829	True	NA	NA	False	NA	NA	NA	44165106	44175712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172091_44172215_44172859_44172953_44175497
transcript_49114.known	chr19	+	560	5	FSM	ENSG00000167380.17	ENST00000586203.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	61.4837376872942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGGAAGCTGTACCGA	44163831	True	NA	NA	False	GGGGCT	-12	NA	44165108	44172154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165808_44166704_44166883_44170034_44170096_44172087
transcript_49116.known	chr19	+	2605	6	FSM	ENSG00000167380.17	ENST00000454662.6	2605	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	48.3801612233775	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGTCATTTGAATTCTT	44163886	False	NA	21	True	TATAAA	-18	NA	44165163	44177687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165247_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_49117.known	chr19	+	3049	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	5.74804314527997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	44211867	True	NA	15	True	AATAAA	-21	NA	44212531	44237268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_49118.known	chr19	+	569	6	FSM	ENSG00000131115.16	ENST00000586228.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	14.0996453856117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTATTACAAGGTGA	44211873	True	NA	77	True	NA	NA	NA	44212537	44234835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228486_44228573_44229732_44229817_44234701
transcript_49121.known	chr19	+	2943	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	11.2805141726785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	44211910	True	NA	14	True	AATAAA	-20	NA	44212574	44237267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
transcript_49124.known	chr19	+	2757	5	FSM	ENSG00000159915.13	ENST00000683810.1	2757	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.76662979332984	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	44259709	True	NA	3	True	ATTAAA	-15	NA	44259885	44275317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44259939_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_49125.known	chr19	-	3190	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	7.61577310586391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	-44304245	True	NA	1	True	AGTAAA	-16	NA	44305025	44286347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_49126.known	chr19	+	584	4	FSM	ENSG00000131115.16	ENST00000588219.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	9.03081145609604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTTGCGGGAATACATA	44211873	True	NA	NA	False	NA	NA	NA	44212537	44234955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44234701
transcript_49129.known	chr19	-	3162	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.61577310586391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATTGTTAATACTTG	-44304245	True	NA	-15	True	AAAAAG	-12	NA	44305025	44286363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
transcript_49132.known	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.4308696896618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-44500497	False	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
transcript_49133.known	chr19	-	4248	5	FSM	ENSG00000167384.11	ENST00000592529.6	4248	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	19.536824204563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAGCCATGAACATTC	-44500495	False	NA	NA	False	AATAAA	-15	NA	44500522	44474442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500274
transcript_4914.known	chr1	+	512	4	FSM	ENSG00000137955.16	ENST00000370826.3	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	128.738322016234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTAGTAACCAGTTTATA	75777568	True	NA	NA	False	ATTAAA	-12	NA	75786230	75790113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951
transcript_49140.nnic	chr19	-	682	3	NNC	ENSG00000266903.2	novel	752	2	NA	NA	-62	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	-44718633	False	188	NA	False	ATTAAA	-21	NA	44718821	44715556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_44715737_44715949_44716084_44718453
transcript_49142.nnic	chr19	-	826	2	NNC	ENSG00000266903.2	novel	876	2	NA	NA	-769	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	44719528	44715556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_44716084_44719229
transcript_49143.known	chr19	-	752	2	FSM	ENSG00000266903.2	ENST00000591312.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCCAGTCTCAGGT	-44717511	True	NA	NA	False	ATTAAA	-14	NA	44718685	44715563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44716084_44718453
transcript_49144.known	chr19	+	819	4	FSM	ENSG00000069399.15	ENST00000474300.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.7104506432917	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCTCAGGCACCAGTC	44757446	False	NA	NA	False	NA	NA	NA	44757588	44759825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44757724_44758245_44758414_44758723_44758842_44759427
transcript_49148.known	chr19	+	1576	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	15.7673713725529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	44776122	True	NA	28	True	AATAAA	-38	NA	44777889	44800652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_49149.known	chr19	+	1441	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.7401105767067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	44776101	True	NA	10	True	AATAAA	-20	NA	44777868	44800634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_4915.known	chr1	+	2235	11	FSM	ENSG00000117054.15	ENST00000681916.1	2235	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	195.748537670145	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTAAACTGTGTTATAC	75719958	True	NA	-37	True	NA	NA	NA	75724702	75763720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75732643_75732742_75732837_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_49152.known	chr19	+	310	1	FSM	ENSG00000285128.1	ENST00000644659.1	310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGCAAATGACAGCAATCA	NA	False	NA	15	True	AATAAA	-16	NA	44803700	44804010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44803700_44804000
transcript_49153.known	chr19	+	2409	15	FSM	ENSG00000187244.12	ENST00000270233.12	2409	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_13	11.672398980466	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCCAGAGCTTCCT	44803358	True	NA	24	True	AATAAA	-24	NA	44809102	44821421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44818883_44819055_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_49156.known	chr19	+	2690	9	FSM	ENSG00000130202.10	ENST00000252483.10	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_6	425.975057955275	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTCTTGCCTTTTCTGT	44827610	True	NA	16	True	NA	NA	NA	44846296	44889223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44882210_44882365_44885936_44886001_44886132_44886220_44888109
transcript_49159.known	chr19	+	553	4	FSM	ENSG00000130208.10	ENST00000588802.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	384.190057133185	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44914312	False	NA	20	True	AATAAA	-15	NA	44914324	44919346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914490_44914871_44914950_44916189_44916326_44919172
transcript_4916.known	chr1	+	6836	5	FSM	ENSG00000184005.11	ENST00000328299.4	6836	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	9.36416040016402	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGGCATATTTCAGTT	76072608	True	NA	6	True	AATAAA	-20	NA	76074745	76634603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_76074885_76313804_76314000_76412007_76412418_76627451_76627560_76628619
transcript_49160.nnic	chr19	+	469	3	NIC	ENSG00000130208.10	novel	514	4	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	418	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44913892	False	NA	20	True	AATAAA	-15	NA	44914574	44919346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_44914734_44916189_44916326_44919172
transcript_49161.known	chr19	+	737	4	FSM	ENSG00000130203.10	ENST00000446996.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	2596.40918706329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGCCAGCCGCTACAGGA	44840961	True	NA	NA	False	NA	NA	NA	44905790	44908944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44905842_44906586_44906668_44907759_44907953_44908532
transcript_49162.known	chr19	+	1166	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	5039	junction_1	243.582976964045	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	44840966	True	NA	37	True	AATAAA	-21	NA	44905795	44909393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
transcript_49163.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	88.3037686373326	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44913925	False	NA	20	True	AATAAA	-15	NA	44914607	44919346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
transcript_49164.known	chr19	+	273	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	307	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	44908863	False	NA	17	True	AATAAA	-12	NA	44914709	44919343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914734_44914871_44914950_44919172
transcript_49165.known	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	340.149313619116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	44908856	True	NA	18	True	AATAAA	-13	NA	44914702	44919344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
transcript_49168.known	chr19	+	253	3	FSM	ENSG00000214855.10	ENST00000575148.6	567	3	177	137	23	-133	multi-exon	FALSE	canonical	2	3	junction_2	17	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGAAGGGTGACATCCC	NA	False	NA	NA	False	NA	NA	NA	44926975	44931058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44927034_44927794_44927931_44930999
transcript_49170.known	chr19	+	2470	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_13	59.3106354652346	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	44942510	True	NA	34	True	AATAAA	-28	NA	44955379	44993341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_49173.known	chr19	+	2229	21	FSM	ENSG00000104859.15	ENST00000221455.8	2229	21	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_12	29.7157786369464	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	45032374	True	NA	43	True	AATAAA	-26	NA	45039044	45070956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_49174.known	chr19	+	2213	21	FSM	ENSG00000104859.15	ENST00000391952.7	2213	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_15	37.6925390495254	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	45032394	True	NA	43	True	AATAAA	-26	NA	45039064	45070956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068059_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_49175.known	chr19	+	599	2	FSM	ENSG00000104859.15	ENST00000588247.5	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCACGAGTTCGAGACC	45032403	True	NA	NA	False	NA	NA	NA	45039073	45040747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45039109_45040183
transcript_49178.known	chr19	+	576	3	FSM	ENSG00000142252.11	ENST00000591747.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	138.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGCACTGTATCCCA	45073369	True	NA	36	True	CATAAA	-27	NA	45079257	45090537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079280_45079906_45080030_45090106
transcript_49179.known	chr19	+	1653	3	FSM	ENSG00000142252.11	ENST00000270257.9	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	70.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGAAAGTGCGGCGGCC	45073371	True	NA	NA	False	AGTAAA	-22	NA	45079259	45091518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079378_45079906_45080030_45090106
transcript_4918.known	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	27.0916961447599	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-77216175	True	NA	-5	True	ATTAAA	-18	NA	77219430	77088988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_49180.nnic	chr19	+	1293	3	NNC	ENSG00000142252.11	novel	1653	3	NA	NA	0	49	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	144.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGACTCCTGTTTTTCTTT	45073371	True	NA	14	True	NA	NA	NA	45079259	45090918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_45079618_45079906_45080030_45090106
transcript_49182.known	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	45079177	False	NA	-35	True	ATTAAA	-30	NA	45079194	45090869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079280_45090106
transcript_49183.known	chr19	+	716	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATGCTCTACCTCAC	45073380	True	NA	NA	False	AGTAAA	-35	NA	45079268	45090713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079378_45090106
transcript_49184.known	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	116.976236903057	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
transcript_49185.known	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	141.481588908239	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	-45172637	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
transcript_49186.known	chr19	-	514	5	FSM	ENSG00000007255.10	ENST00000592647.1	514	5	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_4	214.622197127883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGACGGTGGGGCCGCT	-45172627	True	NA	NA	False	NA	NA	NA	45178227	45163140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178092
transcript_49187.known	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	215.919545201448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
transcript_49188.known	chr19	-	4108	23	FSM	ENSG00000104884.17	ENST00000391945.10	4108	23	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_22	19.2016269971803	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	-45364951	True	NA	-25	True	AATAAA	-16	NA	45370573	45349836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_49190.nic	chr19	-	2287	22	NIC	ENSG00000104884.17	novel	3110	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_20	35.8469915435185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGAGTCTTGCCTGGC	-45364966	True	NA	-7	True	CATAAA	-13	NA	45370588	45351594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45370132_45370233_45370535
transcript_49192.known	chr19	+	1782	13	FSM	ENSG00000104892.17	ENST00000391946.7	1782	13	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_10	4.32932506928685	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTCACCTGACTTCAT	45340283	True	NA	15	True	ATTAAA	-21	NA	45340749	45351519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45340847_45345533_45345800_45346543_45346775_45347446_45347517_45347940_45348161_45348645_45348734_45348819_45348922_45349428_45349603_45350340_45350432_45350513_45350552_45350640_45350748_45350953_45351018_45351285
transcript_49193.nic	chr19	-	761	3	ISM	ENSG00000104881.16	ENST00000585905.1	2176	7	-34	2862	6	508	5prime_fragment	FALSE	canonical	2	6	junction_2	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	-45405524	True	NA	NA	False	NA	NA	NA	45406343	45397514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45398148_45398263_45398340_45406291
transcript_49198.known	chr19	-	3379	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	74.1136931084455	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-45421730	True	NA	-1	True	AATAAA	-19	NA	45423917	45407333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_49199.known	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	89.0006242175363	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	-45424325	False	NA	-62	True	NA	NA	NA	45424367	45409667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_492.known	chr1	+	2385	18	FSM	ENSG00000067606.17	ENST00000378567.8	2385	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	14.4109243452469	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTGATGCCTTTTTT	2047401	True	NA	25	True	AATAAA	-20	NA	2050410	2185395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169517_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_49201.nic	chr19	-	1164	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	782	-52	-19	0	3prime_fragment	FALSE	canonical	3	210	junction_1	58.7684811357244	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-45423543	False	NA	-10	True	AATAAA	-20	NA	45423585	45409615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49202.known	chr19	-	949	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	108.183799041261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423797	False	NA	-8	True	AATAAA	-22	NA	45423839	45409613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_49203.nic	chr19	-	1462	9	NIC	ENSG00000012061.16	novel	1453	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	118.71604777788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-45424354	True	NA	-10	True	AATAAA	-20	NA	45424396	45409615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_49204.nic	chr19	-	1237	9	ISM	ENSG00000012061.16	ENST00000300853.8	3379	10	-9	6102	-9	0	5prime_fragment	FALSE	canonical	3	138	junction_8	74.4579369510061	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGAGCTTGCT	-45423884	False	NA	-2	True	AATAAA	-15	NA	45423926	45413435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_49205.nic	chr19	-	1665	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	-29	3768	-29	0	5prime_fragment	FALSE	canonical	3	73	junction_8	91.6787870774914	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGAGCTTGCT	-45424354	True	NA	-2	True	AATAAA	-15	NA	45424396	45413435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_49208.nic	chr19	-	1092	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	254	2	-19	0	3prime_fragment	FALSE	canonical	3	55	junction_2	105.253241745607	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-45423543	False	NA	-10	True	AATAAA	-20	NA	45423585	45409615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49209.known	chr19	-	1278	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	52.7059614023588	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-45423524	False	NA	0	True	AATAAA	-17	NA	45423566	45413433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49217.known	chr19	-	836	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	132.084821232419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	-45423459	False	NA	-13	True	AATAAA	-17	NA	45423501	45409618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49222.nnic	chr19	+	1914	3	NNC	ENSG00000117877.11	novel	1830	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	86	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	45402584	True	NA	13	True	ATTAAA	-21	NA	45406621	45409786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_45406740_45407093_45407236_45408132
transcript_49224.known	chr19	+	1830	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	93	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	45402653	True	NA	13	True	ATTAAA	-21	NA	45406690	45409786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45406725_45407093_45407236_45408132
transcript_49231.known	chr19	+	1061	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	45402624	True	NA	NA	False	AAGAAA	-4	NA	45406661	45408619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45407236_45408132
transcript_49233.known	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	24.7616414821168	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45493141	False	NA	-23	True	AATAAA	-16	NA	45493267	45485293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
transcript_49240.known	chr19	+	872	5	FSM	ENSG00000213889.11	ENST00000396737.6	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	62.499499998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	45497056	True	NA	NA	False	ATTAAA	-45	NA	45497250	45502510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45497344_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49244.known	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	41.4306649717332	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	45499395	False	NA	NA	False	ATTAAA	-45	NA	45499609	45502510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49249.nnic	chr19	+	713	5	NNC	ENSG00000213889.11	novel	895	5	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	65.0860007989429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	45498847	True	NA	NA	False	AAAAAG	-19	NA	45499690	45502310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_45499825_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49250.nnic	chr19	+	916	5	NNC	ENSG00000213889.11	novel	895	5	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	65.0860007989429	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	45498847	True	NA	NA	False	AATACA	-19	NA	45499690	45502513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_45499825_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49255.nic	chr19	+	542	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	54.7073019704764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCGAAAAAAAAAAAAAA	45498850	True	NA	NA	False	AAAAAG	-11	NA	45499693	45502302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45499726_45499948_45500067_45500455_45500562_45502016
transcript_49256.nic	chr19	+	800	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	54.7073019704764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	45499432	False	NA	NA	False	AATACA	-19	NA	45499646	45502513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45499726_45499948_45500067_45500455_45500562_45502016
transcript_49258.nnic	chr19	+	494	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	83	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	73.1406559688629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	45498849	True	NA	NA	False	AAAAAG	-19	NA	45499692	45502310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45499726_45500455_45500562_45500649_45500711_45502016
transcript_49259.nnic	chr19	+	697	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	83	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	73.1406559688629	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	45498849	True	NA	NA	False	AATACA	-19	NA	45499692	45502513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45499726_45500455_45500562_45500649_45500711_45502016
transcript_49266.known	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	602	junction_6	78.8472503571868	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	45494875	True	NA	16	True	AATAAA	-19	NA	45507478	45526983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_49270.known	chr19	-	7811	2	FSM	ENSG00000125741.5	ENST00000263275.5	7811	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGCCCGGTTTAAT	-45583334	True	NA	NA	False	ATTAAA	-14	NA	45584802	45546280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45553912_45584622
transcript_49272.nic	chr19	-	2263	19	NIC	ENSG00000125746.18	novel	2234	19	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	27.1768329080778	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639346	False	657	-19	True	AATAAA	-15	NA	45639364	45609399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639294
transcript_49273.known	chr19	-	2234	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	24.959535153158	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639379	False	657	-19	True	AATAAA	-15	NA	45639397	45609399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_49276.known	chr19	-	1952	17	FSM	ENSG00000125746.18	ENST00000586195.5	1952	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	31.9215346592234	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639377	False	657	-19	True	AATAAA	-15	NA	45639395	45609399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45638844_45638874_45639356
transcript_49278.known	chr19	-	2062	17	FSM	ENSG00000125746.18	ENST00000588308.5	2062	17	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	34.3383895953203	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639373	False	657	-19	True	AATAAA	-15	NA	45639391	45609399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616764_45616854_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_49279.known	chr19	-	705	4	FSM	ENSG00000125746.18	ENST00000592433.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	5.90668171555645	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCAGGGAAGAGTCAGG	-45615914	False	NA	NA	False	NA	NA	NA	45616152	45609661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801
transcript_49284.known	chr19	-	615	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	4277.64930254404	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45643955	True	NA	-18	True	AATAAA	-16	NA	45691941	45687462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
transcript_49286.known	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4349.88538801758	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45643954	True	NA	-17	True	AATAAA	-17	NA	45691940	45687461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
transcript_49289.known	chr19	-	702	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	4017.92143609935	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45692301	False	NA	-18	True	AATAAA	-16	NA	45692316	45687462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
transcript_4929.known	chr1	+	555	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	77128616	False	NA	NA	False	AAGAAA	-34	NA	77129113	77129668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77129100_77129700
transcript_49295.known	chr19	-	379	3	FSM	ENSG00000125743.11	ENST00000585392.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	4620	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643931	True	NA	-15	True	AATAAA	-19	NA	45691917	45687459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688467_45691886
transcript_49296.known	chr19	-	805	3	FSM	ENSG00000125743.11	ENST00000588599.5	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4611.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45691756	False	NA	-18	True	AATAAA	-16	NA	45691771	45687462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45691411
transcript_49298.known	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	7559	junction_2	844	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643967	True	NA	-15	True	AATAAA	-19	NA	45691953	45687459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45691886
transcript_49299.known	chr19	-	2995	1	FSM	ENSG00000279407.1	ENST00000623179.1	2995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAAGCCG	-45715822	True	NA	NA	False	AATAAA	-24	NA	45717381	45714386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45714400_45717400
transcript_49303.known	chr19	-	3344	3	FSM	ENSG00000177045.11	ENST00000317578.7	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-45765115	True	NA	-5	True	AATAAA	-21	NA	45769252	45764784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45766112_45766349_45767156_45768041
transcript_49304.known	chr19	-	2499	13	FSM	ENSG00000104936.20	ENST00000596686.5	2499	13	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_2	18.0477761018421	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTGGACTCCACAGT	-45779517	True	NA	-12	True	AATAAA	-18	NA	45779619	45769719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438
transcript_49305.known	chr19	-	4077	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_18	24.8107928891235	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCGCGGGTGCCGTCTC	-45848079	True	NA	32	True	AAAAAG	-13	NA	45863147	45815409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_49308.known	chr19	-	1899	12	FSM	ENSG00000125755.19	ENST00000598896.5	1899	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	16.4362027345302	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTTATGTCTAAAAT	-45848064	True	NA	NA	False	NA	NA	NA	45863132	45831169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_49313.nnic	chr19	-	1563	8	NNC	ENSG00000125755.19	novel	623	7	NA	NA	2	3872	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	75.9712620209854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGCATTCGTTATGTT	-45848095	True	NA	NA	False	ATTAAA	-22	NA	45863163	45844877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_45845647_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_49316.known	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	24.3447461820136	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	-45816842	True	NA	13	True	AAAAAG	-4	NA	45817133	45815467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
transcript_49317.nic	chr19	-	1129	4	NIC	ENSG00000125755.19	novel	5164	26	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	133.709469456064	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTACTGAAAAGAAAAAA	-45817181	False	NA	-6	True	AATAAA	-17	NA	45817210	45815447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_45815698_45815850_45816184_45816481_45816615_45816797
transcript_49318.nic	chr19	-	832	3	ISM	ENSG00000125755.19	ENST00000598364.1	995	4	403	-20	403	0	3prime_fragment	FALSE	canonical	3	279	junction_2	11	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTACTGAAAAGAAAAAA	-45816701	False	NA	-6	True	AATAAA	-17	NA	45816730	45815447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45815698_45815850_45816184_45816481
transcript_49319.known	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	45862536	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45864526_45872074
transcript_49322.known	chr19	-	680	4	FSM	ENSG00000188624.3	ENST00000341415.3	680	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTCATGCAACCTGATT	-46123981	False	NA	NA	False	AATAAA	-25	NA	46124688	46120066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46120358_46123885_46124157_46124267_46124322_46124624
transcript_49326.known	chr19	+	2101	13	FSM	ENSG00000124440.16	ENST00000244302.8	2101	13	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	14.2563338750029	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	46292742	True	NA	54	True	NA	NA	NA	46297045	46331513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
transcript_49330.known	chr19	+	2139	13	FSM	ENSG00000011485.15	ENST00000012443.9	2139	13	0	0	0	0	multi-exon	TRUE	canonical	3	822	junction_4	83.009161141005	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGTGGCCTCTGCCTC	46332390	True	NA	NA	False	NA	NA	NA	46347086	46390975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_49334.known	chr19	+	1929	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	282.899947269859	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	46332411	True	NA	22	True	AATAAA	-18	NA	46347107	46390852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_49335.known	chr19	-	3236	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCCTGTGTGGCTCTG	-46410184	True	NA	-8	True	AAAACA	-42	NA	46413564	46410328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46410300_46413600
transcript_49336.known	chr19	-	3684	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGTTAAGTCTCTTG	-46469005	True	NA	-21	True	AATAAA	-15	NA	46471563	46466502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46468578_46469732_46471115_46471336
transcript_49337.known	chr19	-	611	2	FSM	ENSG00000230510.8	ENST00000595691.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATAGCAAGTCCTATGT	-46489686	False	NA	NA	False	AATATA	-16	NA	46490120	46481084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46481441_46489865
transcript_49339.known	chr19	+	880	7	FSM	ENSG00000160014.17	ENST00000602169.2	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1853.63531712386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGATTGCTCTTT	46549392	True	NA	20	True	GATAAA	-20	NA	46601346	46609303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601438_46605826_46605858_46605993_46606186_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49342.known	chr19	+	702	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1581.62377321536	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	46601040	False	NA	22	True	GATAAA	-22	NA	46601073	46609305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49345.known	chr19	+	2184	6	FSM	ENSG00000160014.17	ENST00000291295.14	2184	6	0	0	0	0	multi-exon	FALSE	canonical	3	3515	junction_5	232.311514996567	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTCCTCTCCTCCTGT	46549375	True	NA	32	True	AATAAA	-18	NA	46601329	46610782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601438_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49349.known	chr19	+	1203	6	FSM	ENSG00000160014.17	ENST00000596362.1	1203	6	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	1587.56056892328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACTGACAGTGGGCAAC	46602031	True	NA	NA	False	NA	NA	NA	46602071	46609770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46602211_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49350.known	chr19	+	577	5	FSM	ENSG00000160014.17	ENST00000597743.5	577	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1695.79013663248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCCTTCTTCCCTGAG	46549321	True	NA	36	True	GATAAA	-36	NA	46601275	46609319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601438_46605826_46605858_46608196_46608328_46608923_46608982_46609124
transcript_49352.known	chr19	+	696	6	FSM	ENSG00000160014.17	ENST00000477244.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	1441.09661022431	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGATAAAGCAACAAAAGA	46549354	True	NA	-8	True	NA	NA	NA	46601308	46609275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601438_46605826_46605858_46608198_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49353.known	chr19	-	2923	17	FSM	ENSG00000105287.13	ENST00000600194.5	2923	17	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_16	32.7890987982287	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACGGCACTCTCGAAT	-46714301	False	NA	-12	True	ATTAAA	-35	NA	46714324	46674319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862
transcript_49355.known	chr19	-	1682	10	FSM	ENSG00000105287.13	ENST00000597589.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	27.7145948090911	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGCCCCATGGCCTT	-46697261	True	NA	-38	True	ATTAAA	-9	NA	46697341	46674345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156
transcript_49357.known	chr19	-	1750	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	311.127836447086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	-46787329	False	NA	-4	True	NA	NA	NA	46787342	46774923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
transcript_49358.known	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	83.113877702022	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-46784892	False	245	-7	True	AATAAA	-19	NA	46784905	46774884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
transcript_49359.known	chr19	+	383	3	FSM	ENSG00000181027.11	ENST00000600681.5	383	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCTCGGCTCACTGCAA	46744582	True	NA	NA	False	NA	NA	NA	46746057	46748802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46746091_46748026_46748089_46748514
transcript_49362.known	chr19	-	898	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_4	853.448006617861	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46850286	False	NA	-4	True	AATAAA	-28	NA	46850316	46838157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
transcript_49363.known	chr19	-	829	5	FSM	ENSG00000042753.12	ENST00000599990.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_4	1005.56128604874	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46850739	False	NA	-4	True	AATAAA	-28	NA	46850769	46838157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850655
transcript_49367.known	chr19	-	636	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	1074.25229811251	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46831482	True	NA	-4	True	AATAAA	-28	NA	46850834	46838157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
transcript_4937.known	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	61.6852196764396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	-77682631	False	2189	-5	True	TATAAA	-19	NA	77682658	77562415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_49371.known	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_4	352.97547719353	2273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	-46831494	True	NA	-13	True	AATAAA	-19	NA	46850846	46838166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
transcript_49372.known	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	981.853699641652	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	-46850605	False	NA	18	True	NA	NA	NA	46850777	46838135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
transcript_49373.known	chr19	-	554	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTGCTGGTGCG	-46831473	True	NA	-2	True	ATTAAA	-22	NA	46850825	46845650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46846143_46850763
transcript_49374.known	chr19	-	707	4	FSM	ENSG00000042753.12	ENST00000597020.5	707	4	0	0	0	0	multi-exon	FALSE	canonical	3	1959	junction_3	233.832323590122	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGCCGTCTTTGAG	-46846116	False	NA	-18	True	AATAAA	-14	NA	46846148	46838171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992
transcript_49378.known	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1250.51634767502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	47101845	True	NA	21	True	AATAAA	-17	NA	47130858	47210191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
transcript_4938.known	chr1	-	587	5	FSM	ENSG00000036549.13	ENST00000463166.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	27.7758888246623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACGGCTTGGATGAA	-77681214	True	NA	NA	False	NA	NA	NA	77683403	77633311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_49382.nnic	chr19	+	2147	10	NNC	ENSG00000142230.13	novel	2211	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	232	junction_8	1137.71298643646	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	47130672	False	NA	21	True	AATAAA	-17	NA	47130790	47210191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47205103_47205130_47209158
transcript_49386.nic	chr19	+	2012	9	NIC	ENSG00000142230.13	novel	2522	9	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	958.523465740406	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	47130704	True	NA	21	True	AATAAA	-17	NA	47130729	47210191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_47130859_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_4939.known	chr1	-	420	2	FSM	ENSG00000036549.13	ENST00000458763.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATTCTGTTTGTTTAG	-77682648	False	NA	NA	False	AATAAA	-9	NA	77682675	77676981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77677311_77682584
transcript_49391.known	chr19	+	2522	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	2804	junction_8	145.97345649124	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGCAGTTAGTCGGG	47101821	True	NA	22	True	AATAAA	-22	NA	47130834	47210636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_49398.known	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	971.949072739925	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	47101875	True	NA	20	True	AATAAA	-16	NA	47130888	47210190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_4940.known	chr1	-	4502	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_24	83.0687361800789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGAATGTTGAATTT	-77753963	True	NA	-8	True	AATAAA	-17	NA	77759852	77695990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_49406.known	chr19	+	1851	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_6	987.283202758449	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	47101881	True	NA	0	True	TTTAAA	-10	NA	47130894	47210170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
transcript_49416.nnic	chr19	+	1154	7	NNC	ENSG00000142230.13	novel	2313	7	NA	NA	9	6593	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_6	1118.24928894331	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTTGCTTGTCTGGT	47130672	False	NA	7	True	AATAAA	-19	NA	47130790	47176495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47176214
transcript_4942.known	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_11	71.0121265503454	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753963	True	NA	-4	True	AATAAA	-21	NA	77759852	77695986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_49424.known	chr19	+	4338	17	FSM	ENSG00000134815.19	ENST00000328771.9	4338	17	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	54.4665895297291	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGCTCACTCCCGTA	47343372	True	NA	18	True	AATAAA	-27	NA	47349314	47382704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_49428.known	chr19	-	1636	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	24.8186813136549	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47481500	True	NA	-16	True	NA	NA	NA	47484219	47475149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_4943.known	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	86.1653475602658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753963	True	NA	NA	False	AATAAA	-15	NA	77759852	77711651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_49436.nnic	chr19	-	900	4	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3530	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	85.8461155530963	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47480033	False	2719	-16	True	NA	NA	NA	47480048	47475149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_47475545_47476531_47476715_47476802_47476939_47479862
transcript_49439.nnic	chr19	-	755	3	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3539	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	98.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47480024	False	2719	-16	True	NA	NA	NA	47480039	47475149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_47475545_47476531_47476715_47479862
transcript_4944.nic	chr1	-	2944	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	-3	15661	-3	0	5prime_fragment	FALSE	canonical	3	206	junction_21	80.261759969357	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753966	True	NA	NA	False	AATAAA	-15	NA	77759855	77711651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_49441.nnic	chr19	-	1656	12	NNC	ENSG00000105402.8	novel	1662	11	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_1	179.604846333406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	47515116	47487641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_47487802_47487855_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_49442.nic	chr19	-	1366	12	NIC	ENSG00000105402.8	novel	1662	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	168.085623595548	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	47515116	47487641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_47487891_47488234_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_49445.known	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	38.5985751032341	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-47507014	True	NA	-3	True	AATAAA	-20	NA	47515063	47487636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_49449.known	chr19	-	1460	10	FSM	ENSG00000105402.8	ENST00000595227.5	1460	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	197.871887721872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGCCCAAGAAAGAAAAT	-47506971	True	NA	-45	True	NA	NA	NA	47515020	47487678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47503422_47503503_47514842
transcript_49454.known	chr19	-	1417	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	152.166027746012	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGCCCAAGAAAGAAAA	-47507009	True	NA	-46	True	NA	NA	NA	47515058	47487679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
transcript_49459.known	chr19	+	1753	3	FSM	ENSG00000268061.5	ENST00000593284.5	1753	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGACAAGTTATTT	47484188	True	NA	NA	False	TTTAAA	-13	NA	47484281	47496382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47484525_47493446_47493602_47495027
transcript_49461.nnic	chr19	+	721	3	NNC	ENSG00000268061.5	novel	1753	3	NA	NA	7	-1062	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACTGCCTGTGGAGTG	47484195	True	NA	NA	False	AATGAA	-3	NA	47484288	47495320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_47484525_47493446_47493639_47495027
transcript_49464.known	chr19	+	1504	13	FSM	ENSG00000105373.19	ENST00000246802.10	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	927	junction_12	129.572695168902	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGCTCCACGTGTGG	47738443	True	NA	27	True	AATAAA	-18	NA	47745545	47757058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47752608_47754526_47754632_47754708_47754892_47755347_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47756998
transcript_49469.known	chr19	+	881	7	NNC	ENSG00000178980.16	novel	758	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1802.41813652906	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGTGAGGAGTGT	47778279	False	NA	30	True	AATAAA	-20	NA	47778584	47784684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_47778815_47780119_47780132_47780733_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_49473.known	chr19	+	758	6	FSM	ENSG00000178980.16	ENST00000601048.6	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_3	147.725420967415	5676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	47737037	True	NA	28	True	AATAAA	-18	NA	47778702	47784682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_49474.known	chr19	+	550	6	FSM	ENSG00000178980.16	ENST00000593892.5	550	6	0	0	0	0	multi-exon	TRUE	canonical	2	87	junction_5	1468.23739224963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCTCAGGCATCCTTC	47737011	True	NA	-90	True	NA	NA	NA	47778676	47784564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784405
transcript_49477.known	chr19	+	636	6	FSM	ENSG00000178980.16	ENST00000599874.5	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	1522.23380595755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCGGAATCCACACCAC	47737017	True	NA	NA	False	NA	NA	NA	47778682	47784457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780724_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
transcript_4948.nic	chr1	-	2760	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_8	70.9294543895553	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759874	77711651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_49481.known	chr19	+	717	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1608.36438657414	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	47737025	True	NA	0	True	NA	NA	NA	47778690	47784654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_49488.known	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_2	153.511196660048	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	47778902	False	NA	27	True	AATAAA	-17	NA	47778932	47784681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_4949.nic	chr1	-	2784	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-22	15665	-22	0	5prime_fragment	FALSE	canonical	3	234	junction_8	62.6921047660708	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759874	77711651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_49493.known	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_27	88.6403624462092	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	-48164301	True	NA	-9	True	AATAAA	-18	NA	48170344	48115444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_49494.known	chr19	-	3027	27	FSM	ENSG00000105486.14	ENST00000427526.6	3027	27	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_25	141.446311975949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	-48164301	True	NA	-14	True	AATAAA	-13	NA	48170344	48115449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48165549_48165624_48170240
transcript_49495.nnic	chr19	-	3039	27	NIC	ENSG00000105486.14	novel	3125	28	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_21	128.143901405629	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTGTGACAGGGTCT	-48164327	True	NA	-13	True	AATAAA	-14	NA	48170370	48115448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_49500.known	chr19	-	602	4	FSM	ENSG00000105486.14	ENST00000600055.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_3	85.5686858611256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGTCTTGGATGCC	-48164301	True	NA	NA	False	NA	NA	NA	48170344	48161173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48161508_48162261_48162352_48165549_48165624_48170240
transcript_49501.known	chr19	-	580	6	FSM	ENSG00000105486.14	ENST00000596549.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.805005492061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTCCCCGCAGAGCTC	-48164271	True	NA	NA	False	NA	NA	NA	48170314	48150131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48150211_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_49503.known	chr19	-	5610	14	FSM	ENSG00000105483.18	ENST00000651546.1	5610	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	18.4948417564907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAAGTTAAATTGAT	-48254986	True	NA	NA	False	AATAAA	-38	NA	48255912	48208085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_49506.known	chr19	-	3041	13	FSM	ENSG00000105483.18	ENST00000520753.5	3041	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	20.926292605768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATCACTCAGAAGAT	-48254960	True	NA	NA	False	AATAAA	-18	NA	48255886	48210486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48211976_48215339_48215385_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_49508.known	chr19	-	1903	12	FSM	ENSG00000105483.18	ENST00000521613.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	16.3378584837399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCATGTACCTATTG	NA	False	NA	NA	False	NA	NA	NA	48255946	48211565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750_48249848_48255791
transcript_4951.nic	chr1	-	2651	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-22	15798	-22	0	5prime_fragment	FALSE	canonical	3	234	junction_8	62.6921047660708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	77759874	77711784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_49511.known	chr19	-	579	6	FSM	ENSG00000105483.18	ENST00000521437.1	579	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	35.2454252350571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAACTGTTGGTTGACAA	-48254971	True	NA	NA	False	NA	NA	NA	48255897	48238474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48238533_48240961_48241064_48242539_48242645_48249522_48249634_48249750_48249848_48255791
transcript_49513.known	chr19	-	614	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	12.3161479367536	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTGGTTTATGTACA	-48254972	True	NA	-8	True	ATTAAA	-14	NA	48255898	48238335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_49515.known	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	27.7168220079832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	-48254967	True	NA	-6	True	ATTAAA	-16	NA	48255893	48238333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
transcript_49522.known	chr19	+	2499	6	FSM	ENSG00000178150.10	ENST00000595607.6	2499	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.3478812974068	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGTGCAGTGACTCAC	48270017	True	NA	7	True	AATAAA	-18	NA	48270080	48287608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48270220_48271244_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_49523.known	chr19	-	437	3	FSM	ENSG00000268186.1	ENST00000600941.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	-48271267	False	NA	0	True	AATAAA	-18	NA	48271283	48262899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48263185_48270144_48270234_48271220
transcript_49524.nnic	chr19	+	838	6	NNC	ENSG00000142227.11	novel	753	4	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	59.0410027015124	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48321085	True	NA	11	True	AATAAA	-14	NA	48321435	48330553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48321520_48321813_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_49525.nic	chr19	+	1126	5	NIC	ENSG00000142227.11	novel	753	4	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	51.1682274463363	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48321091	True	NA	11	True	AATAAA	-14	NA	48321441	48330553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_49526.known	chr19	+	502	5	FSM	ENSG00000142227.11	ENST00000593437.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.5412456194066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTCCAAAAAATAAAACCT	48324827	False	NA	-18	True	NA	NA	NA	48325607	48330524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48325611_48326829_48326923_48327520_48327562_48329351_48329493_48330300
transcript_49528.known	chr19	+	649	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	15.7321327225523	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324771	True	NA	11	True	AATAAA	-14	NA	48325551	48330553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_49529.known	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	56.334319517995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324996	False	NA	11	True	AATAAA	-14	NA	48325346	48330553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
transcript_49532.nnic	chr19	-	2016	9	NNC	ENSG00000161558.11	novel	2263	8	NA	NA	-188	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	42.6870882117766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-48363999	True	NA	NA	False	AATAAA	-19	NA	48364247	48332355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_48332818_48333371_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_49539.known	chr19	-	2263	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	26.6105702490494	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-48363692	False	NA	NA	False	AATAAA	-19	NA	48363940	48332355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_49541.known	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	33.8312807259133	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-48363811	False	NA	NA	False	AATAAA	-14	NA	48364059	48332360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
transcript_49545.known	chr19	-	1960	6	FSM	ENSG00000161558.11	ENST00000377431.6	1960	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	52.784088511596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	-48363307	True	NA	NA	False	AATAAA	-18	NA	48363938	48332356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48363290_48363532_48363897
transcript_49547.known	chr19	+	1042	5	FSM	ENSG00000105467.9	ENST00000344846.7	1042	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCAGTCCTTCTCATGT	NA	False	NA	NA	False	AATAAA	-37	NA	48364366	48376377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48364538_48365735_48365936_48373516_48373755_48375612_48375753_48376084
transcript_49551.known	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	TRUE	canonical	3	917	junction_4	65.0499807840095	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-48362203	True	NA	-15	True	AATAAA	-16	NA	48391551	48382574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
transcript_49555.known	chr19	-	1594	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_2	35.8608421540822	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCTTTTGCTGCTC	-48390565	False	NA	-18	True	AATAAA	-13	NA	48390855	48382577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
transcript_49561.known	chr19	+	4443	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.9153102583227	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	48461848	True	NA	28	True	ATTAAA	-17	NA	48469368	48482314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_49565.known	chr19	+	5361	7	FSM	ENSG00000105447.13	ENST00000253237.10	5361	7	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_4	21.9974746025286	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTCTGTTGCCCAGGC	48435969	True	NA	NA	False	NA	NA	NA	48445982	48457022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48446193_48446384_48446503_48446680_48446844_48450312_48450527_48450665_48450809_48451033_48451232_48452707
transcript_49569.known	chr19	+	1546	12	FSM	ENSG00000105443.16	ENST00000391881.7	1546	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	91.5287968956056	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAATTATTTAACCACT	48461800	True	NA	NA	False	NA	NA	NA	48469320	48479365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474954_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_4957.nic	chr1	-	1578	12	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-22	27438	-22	-5401	5prime_fragment	FALSE	canonical	3	287	junction_11	56.026558047158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAAACAGCACAAGA	NA	False	NA	NA	False	NA	NA	NA	77759874	77723424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_49570.nic	chr19	-	718	2	ISM	ENSG00000142235.13	ENST00000648216.1	2222	5	7099	0	7099	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGGCCTGTGCGTATTT	-48491052	True	NA	-6	True	AAAAAG	-24	NA	48491306	48485270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48485790_48491107
transcript_49571.nnic	chr19	+	811	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-2024	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	3.83242742918897	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	48589018	True	NA	6	True	AATAAA	-14	NA	48589076	48599423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
transcript_49576.known	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	1961.24574923412	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	-48619113	False	NA	-97	True	NA	NA	NA	48619127	48615392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
transcript_49577.known	chr19	-	559	6	FSM	ENSG00000063177.13	ENST00000552588.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2081.00885149487	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416500	True	NA	-35	True	ATTAAA	-17	NA	48619181	48615330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48619140
transcript_49580.known	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_4	692.908904546622	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	-48416482	True	NA	-32	True	ATTAAA	-20	NA	48619163	48615327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
transcript_49581.known	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1862.01474662975	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	-48416495	True	NA	-40	True	ATTAAA	-12	NA	48619176	48615335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
transcript_49582.known	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_5	634.086240191348	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	-48416496	True	NA	-70	True	NA	NA	NA	48619177	48615365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_49583.known	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_3	788.970637391954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416502	True	NA	-35	True	ATTAAA	-17	NA	48619183	48615330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
transcript_49584.known	chr19	+	2748	7	FSM	ENSG00000063176.16	ENST00000245222.9	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619116	True	NA	29	True	AATAAA	-23	NA	48619505	48630405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619544_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_49585.known	chr19	+	2136	7	FSM	ENSG00000063176.16	ENST00000600537.5	2136	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	48.3804368176504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGTGATGCTGGAAGG	48619243	True	NA	NA	False	NA	NA	NA	48619451	48629916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619544_48620401_48620554_48626067_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_49586.known	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619144	True	NA	29	True	AATAAA	-23	NA	48619533	48630405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_49588.known	chr19	+	2492	6	FSM	ENSG00000063176.16	ENST00000340932.7	2492	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	47.9808295051263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTGCCCTTCCTCCAT	48619222	False	NA	30	True	AATAAA	-24	NA	48619290	48630406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619544_48620401_48620554_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_49591.known	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	33.0853441874193	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48624941	False	NA	29	True	AATAAA	-23	NA	48624951	48630405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_49593.nic	chr19	+	2617	6	NIC	ENSG00000063176.16	novel	3085	6	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	42.8793656669499	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48622615	True	NA	29	True	AATAAA	-23	NA	48624380	48630405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48624440_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_49597.known	chr19	-	712	3	FSM	ENSG00000105516.11	ENST00000593500.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	45	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACGTGATAATGCAGAT	-48634266	False	157	NA	False	NA	NA	NA	48634526	48630730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48631053_48633443_48633656_48634348
transcript_49598.nnic	chr19	-	1522	3	NNC	ENSG00000105516.11	novel	709	3	NA	NA	-881	123	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	49	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGCTGTTGTGGAAGA	-48635436	False	NA	-5	True	AATAAA	-15	NA	48635517	48630561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_48631053_48633443_48633656_48634698
transcript_496.nic	chr1	-	815	5	ISM	ENSG00000162585.17	ENST00000428120.5	2313	8	12	5070	10	0	5prime_fragment	FALSE	canonical	3	145	junction_2	479.152898352916	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181826	True	NA	-5	True	ATTAAA	-40	NA	2194729	2189547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_2189782_2192844_2192976_2193638_2193911_2193997_2194134_2194687
transcript_4960.known	chr1	-	500	5	FSM	ENSG00000077254.14	ENST00000528150.1	500	5	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	176.441208338642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAACTCAGCCTTCATT	-77753922	True	NA	NA	False	NA	NA	NA	77759811	77739330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77739418_77740876_77740935_77741375_77741430_77741616_77741749_77759642
transcript_49601.nic	chr19	+	497	2	ISM	ENSG00000063176.16	ENST00000601712.5	1394	6	-169	8016	-10	-5540	5prime_fragment	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGGCCAGGCGTGGTA	48619212	True	NA	NA	False	TTTAAA	-15	NA	48619280	48620635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_48619544_48620401
transcript_49603.nnic	chr19	-	1963	10	NNC	ENSG00000063180.9	novel	1715	9	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	86.8861892163721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTCTCAGTGGTCTG	-48646217	True	NA	-11	True	ATTAAA	-15	NA	48646315	48638021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_48638145_48638239_48638436_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_49604.known	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	18.533331459832	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-48641298	True	NA	-2	True	ATTAAA	-21	NA	48646187	48637945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_49605.known	chr19	-	275	2	FSM	ENSG00000063180.9	ENST00000594088.1	275	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTGGTCTGATTCTA	-48638373	False	NA	-5	True	ATTAAA	-21	NA	48638385	48638015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48638145_48638239
transcript_49606.known	chr19	-	381	2	FSM	ENSG00000063180.9	ENST00000599267.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGGTCTGATTCTAG	-48639126	False	NA	-4	True	ATTAAA	-22	NA	48639138	48638014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48638145_48638887
transcript_49607.known	chr19	+	312	2	FSM	ENSG00000176920.13	ENST00000522283.1	312	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCCCTACGTTAT	48695594	True	NA	1	True	AATAAA	-13	NA	48696032	48696643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48696080_48696378
transcript_49608.nic	chr19	-	1193	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2786	-271	2672	0	3prime_fragment	FALSE	canonical	2	12	junction_1	4	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTGGCTCACGCCTGCG	-48713773	True	NA	0	True	ATTAAA	-18	NA	48714171	48712724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48713551_48713715_48713771_48713859
transcript_49609.nic	chr19	-	921	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2786	1	2672	0	3prime_fragment	FALSE	canonical	2	12	junction_1	4	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTCATGGATGTTCTT	-48713773	True	NA	-5	True	NA	NA	NA	48714171	48712996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48713551_48713715_48713771_48713859
transcript_4961.nic	chr1	-	1002	4	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-22	44369	-22	-958	5prime_fragment	FALSE	canonical	3	287	junction_3	83.5078173320052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTATATCCAGATATTTG	NA	False	NA	NA	False	NA	NA	NA	77759874	77740355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77740940_77741375_77741430_77741616_77741749_77759642
transcript_49611.known	chr19	-	3199	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	16.4286586928538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-48740553	True	NA	-23	True	AATAAA	-20	NA	48740610	48720584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
transcript_49612.nnic	chr19	-	1112	5	NIC	ENSG00000105538.10	novel	3199	12	NA	NA	-3489	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	19.1702895126808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-48728968	True	NA	-23	True	AATAAA	-20	NA	48729070	48720584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48728936
transcript_49615.known	chr19	-	3425	2	FSM	ENSG00000174951.12	ENST00000645652.2	3425	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCTCTGTAGCTTTT	-48752270	True	NA	-2	True	ATTAAA	-16	NA	48752641	48748010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48751284_48752489
transcript_49617.known	chr19	-	2041	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_11	87.28854023409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	-48810009	True	NA	-3	True	AATAAA	-15	NA	48811027	48795064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
transcript_49619.nnic	chr19	-	1558	11	NNC	ENSG00000105552.15	novel	1563	11	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	75.7100389644597	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48811068	False	NA	-2	True	AATAAA	-16	NA	48811078	48795063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_48795465_48796427_48796449_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_4962.known	chr1	+	1978	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_14	9.9121138007995	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	77778861	True	NA	NA	False	AATAAA	-16	NA	77779629	77868636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
transcript_49620.nnic	chr19	-	1656	11	NNC	ENSG00000105552.15	novel	1563	11	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_10	67.8465916608933	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810923	False	NA	-2	True	AATAAA	-16	NA	48810933	48795063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810794
transcript_49621.known	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	60.4668504223595	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	-48810906	False	NA	-2	True	NA	NA	NA	48810916	48795109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
transcript_49622.known	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_10	42.6765743704904	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810011	True	NA	-2	True	AATAAA	-16	NA	48811029	48795063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_49626.nnic	chr19	-	1434	9	NIC	ENSG00000105552.15	novel	1579	11	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	76.4656785754236	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810991	False	NA	-2	True	AATAAA	-16	NA	48811001	48795063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810808
transcript_49627.known	chr19	-	1272	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	74.5398383416546	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGGCTTCTTCAGTGA	-48809994	True	NA	0	True	AATAAA	-18	NA	48811012	48795061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_49631.known	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.2854963017141	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	-48836076	True	NA	-5	True	CATAAA	-19	NA	48836491	48813017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_49633.known	chr19	-	991	8	FSM	ENSG00000087076.9	ENST00000599157.5	991	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	42.5838907933744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAGGAGGATATCG	-48836095	True	NA	-11	True	CATAAA	-13	NA	48836510	48813023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48832665_48832753_48834275_48834359_48835804_48835844_48836323
transcript_49635.nic	chr19	-	1199	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-230	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.093094769469	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	-48836729	False	NA	-8	True	CATAAA	-16	NA	48836740	48813020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_49636.nnic	chr19	-	1167	7	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-257	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	38.1462827663311	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	-48836756	False	NA	-5	True	CATAAA	-19	NA	48836767	48813017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48834275_48834359_48835804_48835844_48836323
transcript_49639.nnic	chr19	-	895	7	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.9902765959705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	-48836089	True	NA	-8	True	CATAAA	-16	NA	48836504	48813020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_49641.nnic	chr19	-	1010	6	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-201	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	51.3926064721376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	-48836700	False	NA	-8	True	CATAAA	-16	NA	48836711	48813020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48815036_48815142_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_49642.known	chr19	-	3073	20	FSM	ENSG00000105559.12	ENST00000263265.11	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	15.7929820663634	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-48867776	True	NA	-13	True	ATTAAA	-15	NA	48868617	48837096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
transcript_49645.known	chr19	+	2350	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	15.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCAGCGTCTGTATGTG	48870603	True	NA	13	True	AATAAA	-16	NA	48872420	48876058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48872652_48873224_48874899_48875613
transcript_49651.known	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	71.2546294792291	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	48886729	True	NA	116	True	NA	NA	NA	48900311	48923372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
transcript_49657.known	chr19	+	715	5	FSM	ENSG00000104808.8	ENST00000520557.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	5.3851648071345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	48933519	False	NA	9	True	AATAAA	-20	NA	48933757	48944968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48933812_48934999_48935112_48939448_48939702_48944356_48944508_48944823
transcript_49658.nic	chr19	+	836	3	ISM	ENSG00000104808.8	ENST00000520557.1	715	5	-93	4943	-34	-4934	5prime_fragment	FALSE	canonical	3	18	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGTCTCAGTGAATC	48933426	True	NA	7	True	AATAAA	-19	NA	48933664	48940025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_48933812_48934999_48935112_48939448
transcript_4966.known	chr1	+	3282	13	FSM	ENSG00000162614.19	ENST00000334785.12	3282	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.6809799800081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTATTTTAAGAC	77888589	True	NA	11	True	AATAAA	-20	NA	77888623	77943895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77888760_77916054_77916134_77917565_77917758_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_49664.nic	chr19	+	742	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1530.0668743555	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917969	True	NA	21	True	AATAAA	-17	NA	48954874	48961798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_49668.nnic	chr19	+	840	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	248	junction_5	1185.28352726257	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917973	True	NA	21	True	AATAAA	-17	NA	48954878	48961798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961482
transcript_49669.known	chr19	+	795	6	FSM	ENSG00000087088.21	ENST00000345358.12	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	328.331174273781	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917969	True	NA	21	True	AATAAA	-17	NA	48954874	48961798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_4967.known	chr1	+	3195	12	FSM	ENSG00000162614.19	ENST00000330010.12	3195	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	4.78288961380578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTCTGTATTTTA	77888211	True	NA	7	True	AATAAA	-16	NA	77888514	77943891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_49673.nnic	chr19	+	758	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	1236.64132229196	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917980	True	NA	21	True	AATAAA	-17	NA	48954885	48961798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954937_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_49677.known	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	358.049577572715	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48918023	True	NA	21	True	AATAAA	-17	NA	48954928	48961798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
transcript_49679.known	chr19	+	433	5	FSM	ENSG00000087088.21	ENST00000354470.7	433	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	1247.1862330863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCTGCCTTGGACT	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48956197_48956334_48960809_48960915_48961531
transcript_49681.known	chr19	+	775	5	FSM	ENSG00000087088.21	ENST00000513545.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	365.96789476674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATTTTTCTTACTTT	48917991	True	NA	-64	True	CATAAA	-39	NA	48954896	48961713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955834_48956197_48956334_48960809_48960915_48961531
transcript_49685.known	chr19	+	383	4	FSM	ENSG00000087088.21	ENST00000506183.5	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1473.45467072003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCTTGGACTGT	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48956197_48956334_48960809_48960915_48961531
transcript_49689.known	chr19	+	458	3	FSM	ENSG00000087088.21	ENST00000539787.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1692.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCCGATTCATCTAC	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48956197_48956334_48960809
transcript_49690.known	chr19	+	687	6	NNC	ENSG00000087088.21	novel	677	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1590.60446371812	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCGGCATCTGAGTCA	48918023	True	NA	18	True	AATAAA	-14	NA	48954928	48961795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954965_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_49693.known	chr19	+	871	4	FSM	ENSG00000087086.15	ENST00000331825.11	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	17539	junction_2	1174.50736717807	7776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGTTTTGTGTGTGG	48866682	True	NA	14	True	AATAAA	-14	NA	48965308	48966879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48965610_48965769_48965917_48966280_48966407_48966582
transcript_49694.known	chr19	-	3569	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_10	22.4786318286698	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-48990918	True	NA	-23	True	AATACA	-15	NA	48993309	48968129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
transcript_49699.nnic	chr19	+	1657	16	NNC	ENSG00000183207.14	novel	1545	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	584.681679776839	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48985337	True	NA	26	True	TATAAA	-18	NA	48993888	49015926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48993924_48994775_48994934_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_4970.nic	chr1	+	1623	10	ISM	ENSG00000162614.19	ENST00000330010.12	3195	12	19	7783	19	138	5prime_fragment	FALSE	canonical	3	22	junction_6	5.05769185632935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGCTTTGAAATAAGTT	77888230	True	NA	NA	False	AATAAA	-15	NA	77888533	77936108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822
transcript_49702.nic	chr19	+	1879	15	NIC	ENSG00000183207.14	novel	1545	15	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	456.401703881704	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48993472	True	NA	26	True	TATAAA	-18	NA	48993487	49015926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48993903_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_49703.known	chr19	+	1563	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	482.066030916165	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	48985346	True	NA	29	True	TATAAA	-21	NA	48993897	49015929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_49709.known	chr19	+	1478	15	FSM	ENSG00000183207.14	ENST00000221413.10	1478	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	483.333218390791	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48985347	True	NA	26	True	TATAAA	-18	NA	48993898	49015926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009872_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_49713.known	chr19	+	1545	15	FSM	ENSG00000183207.14	ENST00000595090.6	1545	15	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	234.253275193273	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAGTGCGGATTGAG	48985335	True	NA	12	True	NA	NA	NA	48993886	49015970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_4972.known	chr1	+	1263	9	FSM	ENSG00000162614.19	ENST00000401035.7	1263	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.085211401702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAGAAAAACGACGA	77888209	True	NA	NA	False	ATTAAA	-9	NA	77888512	77933384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281
transcript_49737.known	chr19	+	715	3	FSM	ENSG00000104818.15	ENST00000359342.7	715	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	49031889	49033238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49032105_49032503_49032672_49032906
transcript_49738.known	chr19	-	877	3	FSM	ENSG00000104827.12	ENST00000357383.4	877	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	-49024321	False	NA	NA	False	AATAAA	-17	NA	49024333	49022868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49023201_49023435_49023604_49023956
transcript_49739.known	chr19	-	2151	5	FSM	ENSG00000196337.13	ENST00000684222.1	2151	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	7.29297607290741	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	-49057735	False	88	NA	False	AATAAA	-17	NA	49057749	49054273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49054606_49054840_49055009_49055360_49056596_49057120_49057249_49057461
transcript_49741.nic	chr19	-	1174	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	10	5283	10	-5283	5prime_fragment	FALSE	canonical	2	11	junction_2	7	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATGGATTTGATCATT	-49064919	True	NA	43	True	AATACA	-17	NA	49065066	49061075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_49743.nic	chr19	-	1122	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	10	5335	10	-5335	5prime_fragment	FALSE	canonical	2	11	junction_2	7	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTACTGTT	-49064919	True	NA	-9	True	NA	NA	NA	49065066	49061127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_49745.known	chr19	+	1671	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_9	144.113466955815	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGCACCTCGGTTTCT	49064743	True	NA	21	True	AATAAA	-17	NA	49085450	49108604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
transcript_49746.known	chr19	+	1603	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_9	345.563665499688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCCCTTGGATTTAAAA	49064743	True	NA	-2	True	NA	NA	NA	49085450	49108563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
transcript_49749.known	chr19	+	746	6	FSM	ENSG00000104863.12	ENST00000221459.7	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.38230690505755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	49114067	True	NA	9	True	TTTAAA	-16	NA	49114369	49118460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
transcript_4975.nnic	chr1	-	2457	22	NIC	ENSG00000162613.17	novel	2201	21	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	260.803033383859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77979031	False	NA	91	True	AATAAA	-20	NA	77979139	77944054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77944270_77945505_77945643_77946529_77946577_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_49752.known	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-49118791	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49118400_49119100
transcript_49753.known	chr19	+	367	3	FSM	ENSG00000104863.12	ENST00000486217.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATACTAAGGCATCTTT	49114121	False	NA	NA	False	AGTAAA	-24	NA	49114423	49115489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49114442_49114848_49114968_49115259
transcript_49754.known	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	49149448	True	NA	17	True	NA	NA	NA	49149957	49151021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49150152_49150235
transcript_49755.known	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	4.02988833592198	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	-49155065	True	NA	-6	True	AATAAA	-15	NA	49155396	49151197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
transcript_49756.nic	chr19	+	751	5	ISM	ENSG00000130529.16	ENST00000595071.5	2947	14	27784	0	-291	0	3prime_fragment	FALSE	canonical	3	33	junction_1	45.5357002801099	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	49210273	True	NA	8	True	AATAAA	-16	NA	49210309	49211836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_49757.nic	chr19	+	584	3	NIC	ENSG00000130529.16	novel	2947	14	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	65.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	49209842	True	NA	8	True	AATAAA	-16	NA	49210707	49211836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49210843_49211163_49211270_49211493
transcript_49758.known	chr19	-	2191	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	128.980914824205	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49361449	False	5819	-4	True	GATAAA	-17	NA	49361495	49340594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
transcript_49759.known	chr19	-	2175	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	123.832183709334	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356597	True	NA	-4	True	GATAAA	-17	NA	49362416	49340594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_49760.nic	chr19	-	2125	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_8	112.482189948256	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356587	True	NA	-4	True	GATAAA	-17	NA	49362406	49340594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_49763.known	chr19	-	1444	12	FSM	ENSG00000074219.14	ENST00000539846.5	1444	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	139.500288811573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAGATCACTCCGGA	-49356622	True	NA	NA	False	GATAAA	-33	NA	49362441	49341081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49362372
transcript_49764.known	chr19	-	2164	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_11	87.8732182143049	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356638	True	NA	-4	True	GATAAA	-17	NA	49362457	49340594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_4977.known	chr1	-	6714	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_16	159.531307984191	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77964775	True	NA	91	True	AATAAA	-20	NA	77979072	77944054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_49770.nnic	chr19	-	2064	11	NIC	ENSG00000074219.14	novel	2164	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_7	119.624788401067	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49362419	False	NA	-4	True	GATAAA	-17	NA	49362465	49340594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_49774.known	chr19	+	939	5	FSM	ENSG00000104901.7	ENST00000221498.7	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.20565096031518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	49363714	True	NA	5	True	AATAAA	-19	NA	49363876	49375116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_49776.known	chr19	+	524	2	FSM	ENSG00000104901.7	ENST00000594268.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	49361762	False	NA	5	True	AATAAA	-19	NA	49361782	49375116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49361907_49374716
transcript_49777.known	chr19	+	1849	4	FSM	ENSG00000261949.7	ENST00000610896.3	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	10.1434160364686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	49425268	True	NA	4	True	AATAAA	-16	NA	49425387	49428987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49425490_49426409_49427614_49427945_49428120_49428618
transcript_49778.nic	chr19	+	700	2	ISM	ENSG00000261949.7	ENST00000610896.3	1849	4	2401	0	2401	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	49427669	False	NA	4	True	AATAAA	-16	NA	49427788	49428987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_49428120_49428618
transcript_49779.known	chr19	+	3099	17	FSM	ENSG00000161618.10	ENST00000293350.9	3099	17	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	25.0296698939479	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTCAATTTCCAT	49449905	True	NA	12	True	AATAAA	-18	NA	49453224	49471050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_49784.known	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_9	302.166620702331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-49452720	True	NA	-78	True	NA	NA	NA	49453494	49446368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
transcript_49789.known	chr19	+	1050	9	FSM	ENSG00000090554.13	ENST00000597551.6	1050	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.27017271313468	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	49474176	True	NA	7	True	TATAAA	-17	NA	49474214	49486231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49486014
transcript_49793.known	chr19	-	998	9	FSM	ENSG00000104872.11	ENST00000601807.5	998	9	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_8	320.768997878536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGGTGCCTTCTTGAT	-49450827	False	NA	-110	True	NA	NA	NA	49451601	49446400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451367
transcript_4980.known	chr1	-	2201	21	FSM	ENSG00000162613.17	ENST00000294623.8	2201	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	243.02787391573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCCTGTGAGGTTTT	-77964790	True	NA	NA	False	AATAAA	-17	NA	77979087	77946481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77946577_77947452_77947553_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_49809.known	chr19	+	660	8	FSM	ENSG00000142541.18	ENST00000467825.2	660	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6216.46053241074	7354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCTGCCCTTCCTCCA	49222962	True	NA	5	True	AATAAA	-19	NA	49487633	49491843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490601_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_4981.known	chr1	+	3778	6	FSM	ENSG00000137960.6	ENST00000370759.4	3778	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	4.51663591625449	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTAGTCCCATGTTA	78045656	True	NA	NA	False	AGTAAA	-2	NA	78045965	78138444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_78046335_78080674_78080861_78094951_78095133_78119392_78119500_78125880_78125963_78135591
transcript_49810.known	chr19	-	1197	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_3	92.0258115965298	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	-49439863	True	NA	-7	True	AATAAA	-16	NA	49451814	49446297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
transcript_49811.known	chr19	+	1127	8	FSM	ENSG00000142541.18	ENST00000391857.9	1127	8	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	2410.93200709957	3832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTCTTTGCACTGTG	49222936	True	NA	16	True	AATAAA	-16	NA	49487607	49492308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_49812.known	chr19	+	850	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	2598.50667050648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	49222943	True	NA	23	True	AATAAA	-37	NA	49487614	49491861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_49813.known	chr19	+	2312	3	FSM	ENSG00000142541.18	ENST00000488946.1	2312	3	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	3770	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCGTCTTTGCACT	49222936	True	NA	13	True	AATAAA	-13	NA	49487607	49492305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49491548_49491728
transcript_49822.known	chr19	+	573	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1515.85635863033	3264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	49438925	True	NA	58	True	AATAAA	-38	NA	49496433	49499708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_49823.known	chr19	+	751	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1738.3533076513	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49438922	True	NA	39	True	AATAAA	-19	NA	49496430	49499689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
transcript_49824.known	chr19	+	1133	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1802.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49496266	False	NA	39	True	AATAAA	-19	NA	49496369	49499689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49498047_49499511
transcript_49825.known	chr19	+	547	5	FSM	ENSG00000142534.7	ENST00000601306.1	547	5	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_1	3772.09179368689	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGACTTGGGATCTTC	49438957	True	NA	38	True	AATAAA	-18	NA	49496465	49499688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496498_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_49827.nic	chr19	+	2149	6	NIC	ENSG00000104870.13	novel	1511	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	11	junction_1	66.9973133789706	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512578	True	NA	28	True	AATATA	-20	NA	49512607	49526333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49512751_49513386_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_49831.nic	chr19	+	2173	5	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	23	0	intron_retention	FALSE	canonical	3	76	junction_1	54.2471197392083	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49511350	True	NA	28	True	AATATA	-20	NA	49513219	49526333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_49833.nic	chr19	+	2606	4	ISM	ENSG00000104870.13	ENST00000426395.7	1559	6	66	3	23	1	intron_retention	FALSE	canonical	3	76	junction_1	14.2361043360417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGTGTGTTCTCATCA	49511350	True	NA	25	True	AATATA	-17	NA	49513219	49526330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_49513474_49513881_49514134_49514210_49514487_49524506
transcript_49835.nnic	chr19	+	1875	4	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	11	0	intron_retention	FALSE	canonical	1	4	junction_1	87.3765796232988	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49511396	True	NA	28	True	AATATA	-20	NA	49513265	49526333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49513474_49514210_49514487_49524506_49525574_49526009
transcript_49836.nic	chr19	+	1495	3	NIC	ENSG00000104870.13	novel	383	2	NA	NA	5	0	intron_retention	FALSE	canonical	2	7	junction_1	105.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49506665	True	NA	28	True	AATATA	-20	NA	49506820	49526333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49506925_49524506_49525574_49526009
transcript_49838.nic	chr19	+	1652	3	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	16	0	intron_retention	FALSE	canonical	3	12	junction_1	103	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512815	False	NA	28	True	AATATA	-20	NA	49513212	49526333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49513474_49524506_49525574_49526009
transcript_49840.known	chr19	+	582	2	FSM	ENSG00000104870.13	ENST00000593431.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCAGTCCTCCCTGAG	49512413	True	NA	NA	False	NA	NA	NA	49513397	49525012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49513474_49524506
transcript_49842.nnic	chr19	+	1620	7	NNC	ENSG00000142552.8	novel	1469	7	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	42.445062531858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	49526809	True	NA	14	True	AATAAA	-15	NA	49527962	49543633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539007_49539180_49542552_49542753_49543105
transcript_49843.known	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.7709623886731	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	49526849	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
transcript_4985.nnic	chr1	+	2211	3	NIC	ENSG00000162616.9	novel	949	3	NA	NA	2	-646	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	82	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	77975863	True	NA	11	True	AATATA	-20	NA	77979282	78017318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78013050_78013620_78016013
transcript_49853.known	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	197.393483935007	1298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-49574839	True	NA	-2	True	AATAAA	-18	NA	49580558	49555710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
transcript_49865.known	chr19	+	1403	7	FSM	ENSG00000126460.11	ENST00000246794.10	1403	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	3.07769755210323	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	49581305	False	NA	9	True	AAAAAG	-40	NA	49581315	49591004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49581482_49583206_49583305_49583541_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_49867.known	chr19	-	986	6	FSM	ENSG00000126458.4	ENST00000246792.4	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_2	26.0415053328336	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-49638942	True	NA	-22	True	AATAAA	-18	NA	49640143	49635291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49639945
transcript_49869.known	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	182.418558848174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-49659642	True	NA	-93	True	NA	NA	NA	49665842	49659631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
transcript_49874.known	chr19	-	1741	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	152.067519912192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-49665842	False	NA	-34	True	AATAAA	-16	NA	49665857	49659572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
transcript_49875.known	chr19	-	1595	8	FSM	ENSG00000126456.16	ENST00000377139.8	1595	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_7	98.7577948357309	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49665842	False	NA	-33	True	AATAAA	-17	NA	49665857	49659571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_49876.nic	chr19	-	1557	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_7	134.901475763853	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49665845	False	NA	-33	True	AATAAA	-17	NA	49665860	49659571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665671
transcript_4988.nnic	chr1	+	2235	4	NIC	ENSG00000162616.9	novel	949	3	NA	NA	0	-646	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	75.7011668778406	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	77975755	True	NA	11	True	AATATA	-20	NA	77979174	78017318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979294_78005079_78005322_78013050_78013620_78016013
transcript_49882.known	chr19	-	1556	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	153.398374256345	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49659602	True	NA	-33	True	AATAAA	-17	NA	49665802	49659571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_49885.known	chr19	+	1064	7	FSM	ENSG00000126453.10	ENST00000246784.8	1064	7	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_2	150.056655967005	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650841	True	NA	29	True	AATAAA	-39	NA	49665932	49673916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_49889.known	chr19	-	1494	8	FSM	ENSG00000126456.16	ENST00000593922.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	186.161987833945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664442_49664674_49665630
transcript_49890.known	chr19	-	1442	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	153.880906331271	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGCGTGTCTGGTGTT	-49665860	False	NA	-31	True	AATAAA	-19	NA	49665875	49659569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_49896.known	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.975450444404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_4990.nnic	chr1	+	2375	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	19	-756	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	75.3760940587635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCAACTACTTGTT	77975831	True	NA	6	True	AATAAA	-21	NA	77979250	78017208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_49902.nic	chr19	+	2105	6	NIC	ENSG00000126453.10	novel	1431	7	NA	NA	-523	0	intron_retention	FALSE	canonical	3	87	junction_5	381.359882525679	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49664550	True	NA	29	True	AATAAA	-39	NA	49664618	49673916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49673697
transcript_49903.known	chr19	+	1630	6	FSM	ENSG00000126453.10	ENST00000619007.4	1630	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	413.369278006966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	49665073	False	NA	28	True	AATAAA	-38	NA	49665141	49673915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669165_49673697
transcript_49904.known	chr19	+	893	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	324.58157680312	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650869	True	NA	29	True	AATAAA	-39	NA	49665960	49673916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_49906.known	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	177.720454647179	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665716	False	NA	-40	True	AATAAA	-10	NA	49665731	49659578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
transcript_4991.nnic	chr1	+	2485	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	19	-646	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	75.3760940587635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	77975831	True	NA	11	True	AATATA	-20	NA	77979250	78017318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_49911.known	chr19	+	620	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	478.772584323706	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650869	True	NA	29	True	AATAAA	-39	NA	49665960	49673916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
transcript_49913.known	chr19	-	710	5	FSM	ENSG00000126456.16	ENST00000596765.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	237.181760470741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49665630
transcript_49916.known	chr19	+	1259	3	FSM	ENSG00000126453.10	ENST00000611631.4	1259	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	49665073	False	NA	28	True	AATAAA	-38	NA	49665141	49673915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49673697
transcript_4992.nnic	chr1	+	3131	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	75.3760940587635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	77975831	True	NA	5	True	TATAAA	-16	NA	77979250	78017964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_4994.known	chr1	+	949	3	FSM	ENSG00000162616.9	ENST00000487931.1	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	72.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGCACTGAAAATATA	77975755	True	NA	NA	False	AATGAA	-22	NA	77979174	78016274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77979294_78013050_78013620_78016013
transcript_49957.known	chr19	+	1328	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	1809.36580325815	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49613080	True	NA	27	True	AATAAA	-13	NA	49677270	49688447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_4997.nic	chr1	+	2082	3	NIC	ENSG00000162616.9	novel	906	2	NA	NA	21	-756	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	82	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCAACTACTTGTT	77975882	True	NA	6	True	AATAAA	-21	NA	77979301	78017208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78013050_78013620_78016013
transcript_49975.known	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_1	318.550226673252	8133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49677062	False	NA	27	True	AATAAA	-13	NA	49677151	49688447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_4998.nic	chr1	+	2192	3	NIC	ENSG00000162616.9	novel	906	2	NA	NA	21	-646	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	82	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	77975882	True	NA	11	True	AATATA	-20	NA	77979301	78017318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78013050_78013620_78016013
transcript_5.known	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00019_+_0_600
transcript_50.known	ERCC-00137	+	521	1	FSM	ERCC-00137A	DQ855000	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00137_+_0_500
transcript_500.known	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_3	132.290085292386	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181869	True	NA	-5	True	ATTAAA	-40	NA	2194772	2189547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
transcript_5000.known	chr1	-	209	1	FSM	ENSG00000273338.1	ENST00000608684.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTAAACATGATTTTAG	-78004241	True	NA	NA	False	AATAAA	-31	NA	78004554	78004345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_78004300_78004600
transcript_50007.known	chr19	+	1192	8	FSM	ENSG00000126457.22	ENST00000610806.4	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	1704.4433048922	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTCCTGGGGGC	49677062	False	NA	30	True	AATAAA	-16	NA	49677151	49688450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49686092_49686244_49686604_49686727_49688161
transcript_5001.known	chr1	+	2903	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	67	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	78004755	True	NA	5	True	TATAAA	-16	NA	78004938	78017964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_78005322_78013050_78013620_78016013
transcript_5002.nnic	chr1	-	671	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-38	-208180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTGAAATACTGTTTA	-82848172	True	NA	NA	False	AATAAA	-3	NA	82848243	82744183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_82744643_82833947_82834060_82848143
transcript_50027.known	chr19	+	2846	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	51.3381597663906	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686198	True	NA	21	True	AATAAA	-16	NA	49691115	49713731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_50028.known	chr19	+	2910	20	FSM	ENSG00000169169.15	ENST00000392518.8	2910	20	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	74.7043665542482	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686198	True	NA	21	True	AATAAA	-16	NA	49691115	49713731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49691820_49691954_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_50029.known	chr19	+	2783	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	55.0860157916914	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686192	True	NA	21	True	AATAAA	-16	NA	49691109	49713731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_50032.known	chr19	+	1027	4	FSM	ENSG00000169169.15	ENST00000600944.5	1027	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	44.0983748755741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTAGGGAGGCTGAGGCA	49686230	True	NA	NA	False	AATACA	-42	NA	49691147	49697935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325
transcript_50034.known	chr19	+	700	3	FSM	ENSG00000169169.15	ENST00000599937.5	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49712543	False	NA	21	True	AATAAA	-16	NA	49712554	49713731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49712850_49712971_49713065_49713419
transcript_50035.nnic	chr19	-	828	6	NNC	ENSG00000126467.11	novel	1854	11	NA	NA	1074	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	1.16619037896906	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAATTCTGTCTGCTTT	-49746275	True	NA	-5	True	AATAAA	-16	NA	49746304	49739759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_49739933_49740058_49740184_49741884_49742021_49744230_49744405_49745201_49745397_49746279
transcript_50037.known	chr19	+	3357	23	FSM	ENSG00000196961.13	ENST00000354293.10	3357	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	123.128804425848	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	49759610	True	NA	9	True	AATAAA	-17	NA	49767000	49807114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_5004.nnic	chr1	-	798	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-38	-287693	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTCTGTGTATGC	-82848172	True	NA	NA	False	AATAAA	-38	NA	82848243	82823696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_82824283_82833947_82834060_82848143
transcript_50040.nic	chr19	-	1774	12	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_2	76.6814813809492	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGGCATCCCCCAAAC	NA	False	NA	-19	True	AATAAA	-22	NA	49813312	49806884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49807375_49808114_49808160_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_50043.nic	chr19	-	1916	11	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	59.390571642307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	NA	False	NA	0	True	AATAAA	-41	NA	49813312	49806865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812446_49812737_49812995
transcript_50044.known	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_9	37.4112282610448	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810696	True	NA	0	True	AATAAA	-41	NA	49813292	49806865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_50045.known	chr19	-	1524	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	68.855210405604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	-49810653	True	NA	-24	True	AATAAA	-17	NA	49813249	49806889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
transcript_50046.known	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	64.6285540608793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	-49810677	True	NA	-54	True	NA	NA	NA	49813273	49806919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
transcript_5005.known	chr1	-	1601	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTGCATAATTTG	-84077348	True	NA	NA	False	AATAAA	-19	NA	84077931	84076330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84076300_84077900
transcript_50054.known	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	88.7306925616449	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	-49810560	True	NA	-27	True	AATAAA	-14	NA	49813156	49806892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_50055.known	chr19	-	1479	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	67.5224699682801	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	-49810579	True	NA	-24	True	AATAAA	-17	NA	49813175	49806889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
transcript_50058.nnic	chr19	-	1550	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	71.3148124104369	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	NA	False	NA	0	True	AATAAA	-41	NA	49813312	49806865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_5006.known	chr1	+	4513	10	FSM	ENSG00000142875.20	ENST00000370689.6	4513	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	11.9917667228729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCGTGAATTCT	84076208	True	NA	18	True	ATTAAA	-23	NA	84078061	84238498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84214152_84214318_84235179
transcript_50065.known	chr19	+	3286	24	FSM	ENSG00000196961.13	ENST00000359032.9	3286	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	157.683898100684	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCCATGTCTGTGTC	49759743	False	NA	5	True	AATAAA	-13	NA	49767133	49807110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802533_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_50073.known	chr19	+	2332	18	FSM	ENSG00000104973.19	ENST00000312865.10	2332	18	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	25.1605227114658	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	49812004	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_50078.known	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_16	33.4682685539602	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863856	True	NA	-1	True	AATAAA	-17	NA	49867576	49861203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_5008.known	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	30.4094454898474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	84076290	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
transcript_50083.nic	chr19	-	1734	16	NIC	ENSG00000039650.12	novel	1731	17	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_15	64.1432424777198	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863417	False	NA	-1	True	AATAAA	-17	NA	49867026	49861203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49866751
transcript_50084.known	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	24.4834638072312	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49867249	False	NA	-28	True	NA	NA	NA	49867286	49861230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
transcript_50085.known	chr19	-	1600	16	FSM	ENSG00000039650.12	ENST00000600910.5	1600	16	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_3	64.2470924547476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863835	True	NA	-1	True	AATAAA	-17	NA	49867555	49861203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_50091.known	chr19	+	1623	13	FSM	ENSG00000104973.19	ENST00000538643.5	1623	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	81.5402082138349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTTTTTAACACACGC	49812057	True	NA	0	True	NA	NA	NA	49818341	49836962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49818476_49818570_49818617_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_50092.known	chr19	+	1413	13	FSM	ENSG00000104960.15	ENST00000601638.5	1413	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	434.706861638456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCAATAAAGCCTTTT	49850815	False	NA	0	True	NA	NA	NA	49850827	49860713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_50093.nic	chr19	+	1395	13	NIC	ENSG00000104960.15	novel	1480	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	351.352822040119	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49850812	True	NA	27	True	AATAAA	-15	NA	49850824	49860740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_50096.nic	chr19	+	1430	13	NIC	ENSG00000104960.15	novel	1438	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	413.637346194304	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49850917	False	NA	27	True	AATAAA	-15	NA	49850978	49860740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49851097_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_50097.nic	chr19	+	1382	13	NIC	ENSG00000104960.15	novel	1438	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	322.733410366306	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49850917	False	NA	27	True	AATAAA	-15	NA	49850978	49860740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49851097_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_5010.known	chr1	+	1567	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	17	True	AATAAA	-17	NA	84298365	84350798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
transcript_50101.nic	chr19	+	1362	13	NIC	ENSG00000104960.15	novel	1438	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	421.785910346311	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49842983	True	NA	27	True	AATAAA	-15	NA	49851158	49860740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_50102.known	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	333.947382332407	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	49849158	True	NA	12	True	NA	NA	NA	49851019	49860725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_50105.known	chr19	+	1742	13	FSM	ENSG00000104946.14	ENST00000599049.6	1742	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	86.7487992231977	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGTGTGGTGGTTCAT	49876511	False	NA	NA	False	AAAAAG	-4	NA	49878186	49885534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49885171
transcript_5011.nnic	chr1	+	1365	3	NIC	ENSG00000203943.9	novel	1567	4	NA	NA	117	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	84298141	True	NA	17	True	AATAAA	-17	NA	84298482	84350798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_84298568_84325636_84325749_84349630
transcript_50116.known	chr19	-	3640	4	FSM	ENSG00000204673.11	ENST00000391833.5	3640	4	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	22.2161102706022	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGTTGTGAGTGT	-49875275	False	NA	NA	False	ATTAAA	-23	NA	49875285	49869037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916
transcript_50117.known	chr19	-	645	3	FSM	ENSG00000039650.12	ENST00000595792.1	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	77.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGAGGCTGAAGCGGGA	-49863841	True	NA	NA	False	NA	NA	NA	49867561	49866140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49866529_49867053_49867218_49867468
transcript_50118.known	chr19	-	752	3	FSM	ENSG00000039650.12	ENST00000626274.2	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	34.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGTACCTGTCCAAG	-49863844	True	NA	NA	False	AGTAAA	-25	NA	49867564	49865953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49866446_49867053_49867218_49867468
transcript_50120.known	chr19	-	619	2	FSM	ENSG00000039650.12	ENST00000629088.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAGAAAAAA	-49867193	False	3720	NA	False	NA	NA	NA	49867258	49866031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49866446_49867053
transcript_50121.nic	chr19	-	1109	2	ISM	ENSG00000039650.12	ENST00000637897.1	190	3	-178	231	-16	-231	5prime_fragment	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTCGGACA	-49863417	False	NA	NA	False	AAAACA	-33	NA	49867026	49865611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49866446_49866751
transcript_50122.known	chr19	+	2007	3	FSM	ENSG00000169136.13	ENST00000423777.7	2007	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATCTTGTCTTTGA	49927544	True	NA	11	True	AATAAA	-19	NA	49929204	49933935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49929401_49930731_49931029_49932421
transcript_50123.known	chr19	+	722	3	FSM	ENSG00000169136.13	ENST00000596658.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACTACCAC	49930090	True	NA	NA	False	NA	NA	NA	49930218	49932632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49930433_49930731_49931029_49932421
transcript_50124.known	chr19	-	3361	3	FSM	ENSG00000213024.12	ENST00000352066.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	32.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-49918221	True	NA	-1	True	AATAAA	-19	NA	49929504	49906824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49927693_49927816_49929325
transcript_50125.known	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	27.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-49918160	True	NA	-1	True	NA	NA	NA	49929443	49908104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49927693_49927849_49929325
transcript_50127.known	chr19	-	562	3	FSM	ENSG00000213024.12	ENST00000599560.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	54.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTTGCTTTGGGAGCC	-49929235	False	NA	NA	False	NA	NA	NA	49929763	49909858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49927693_49927816_49929349
transcript_50128.known	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-49929216	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49929325
transcript_5013.known	chr1	+	1948	9	FSM	ENSG00000117133.11	ENST00000370654.6	1948	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	34.4492380176979	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCCAGTGTATATAAA	84472914	True	NA	22	True	AATAAA	-27	NA	84479265	84498352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84479510_84480955_84481013_84482914_84482996_84489632_84489729_84490318_84490473_84495372_84495456_84495881_84496064_84496243_84496371_84497428
transcript_50133.known	chr19	-	1923	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_14	48.4951081059119	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-50022535	True	NA	-6	True	AATAAA	-14	NA	50025372	49976467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_50134.known	chr19	-	2126	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_14	28.6616432871245	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAATGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	50025946	49976759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50135.known	chr19	-	1749	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	60.6331485099104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	-50022535	True	NA	-30	True	NA	NA	NA	50025372	49976491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
transcript_50136.nic	chr19	-	1762	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	46.423570834158	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-50022603	True	NA	-6	True	AATAAA	-14	NA	50025440	49976467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_50145.known	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	65.0608155668389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50022490	True	NA	-14	True	AATAAA	-19	NA	50025327	49981699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_50146.nic	chr19	-	1865	13	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	51.2934774930822	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50022603	True	NA	-14	True	AATAAA	-19	NA	50025440	49981699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50150.nic	chr19	-	1715	12	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	64.444222791804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50022603	True	NA	-14	True	AATAAA	-19	NA	50025440	49981699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_50151.known	chr19	-	1979	12	FSM	ENSG00000105053.11	ENST00000593919.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_11	30.5505948055878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTGTGTGTGGGAAAC	-50022535	True	NA	NA	False	NA	NA	NA	50025372	49987700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50155.nic	chr19	-	1874	11	ISM	ENSG00000105053.11	ENST00000593919.5	1979	12	-1	1252	-1	-662	5prime_fragment	FALSE	canonical	3	134	junction_10	28.9276684162412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCCCTCCCCCACTGAG	-50022536	True	NA	NA	False	AATAAA	-14	NA	50025373	49988952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50158.known	chr19	+	4715	5	FSM	ENSG00000142528.16	ENST00000391821.6	4715	5	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	12.4172259381876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCATTGGTTCCTTCTC	NA	False	NA	9	True	ATTAAA	-12	NA	50025805	50048772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50026123_50031013_50031092_50039160_50039288_50041729_50041820_50044669
transcript_50159.known	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	26.7124606795322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	50025208	True	NA	2	True	AATAAA	-16	NA	50026004	50047167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
transcript_50160.known	chr19	-	1668	11	FSM	ENSG00000105053.11	ENST00000601912.5	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	66.5958707428621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTAAAAGAGTTCAATGC	-50020621	False	NA	32	True	NA	NA	NA	50020649	49981653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584
transcript_50162.known	chr19	-	728	7	FSM	ENSG00000161652.13	ENST00000293405.8	814	7	86	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	8.83176086632785	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-50162909	True	NA	0	True	AATAAA	-26	NA	50163195	50152547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50152652_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_50163.nnic	chr19	+	1644	7	NNC	ENSG00000105357.20	novel	6137	42	NA	NA	7810	0	intron_retention	FALSE	canonical	3	8	junction_1	29.3919868142473	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	50291681	True	NA	8	True	AATAAA	-17	NA	50292573	50310540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_50292613_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_50165.nic	chr19	+	1624	5	ISM	ENSG00000105357.20	ENST00000595016.1	4039	10	8692	-1	8692	0	3prime_fragment	FALSE	canonical	3	71	junction_2	10.4522724801834	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	50293432	True	NA	8	True	AATAAA	-17	NA	50293455	50310540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_50169.known	chr19	+	2416	10	FSM	ENSG00000131408.15	ENST00000253727.10	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	54.2445309298778	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTAGGCACAATTCT	50371202	True	NA	NA	False	AATAAA	-18	NA	50376456	50383388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50171.known	chr19	+	1830	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	140.420004905917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	50371218	True	NA	15	True	NA	NA	NA	50376472	50382950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50175.known	chr19	+	1466	9	FSM	ENSG00000131408.15	ENST00000411902.6	1466	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	149.589803713355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATAAGCCCCAGTCCAGG	50371204	True	NA	NA	False	NA	NA	NA	50376458	50382731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50179.known	chr19	+	1915	10	FSM	ENSG00000131408.15	ENST00000598168.5	1915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.534789195073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAGGAAAATAAAATAT	50371203	True	NA	-25	True	AATAAA	-12	NA	50376457	50382978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379091_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50180.known	chr19	+	3436	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	96.4756767948158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369517	True	NA	18	True	AATAAA	-18	NA	50384346	50418014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_50183.known	chr19	+	1443	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.7985074211233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	50418557	False	NA	18	True	NA	NA	NA	50418957	50428989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
transcript_50185.nic	chr19	+	1539	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	832	2381	812	-56	3prime_fragment	FALSE	canonical	3	59	junction_4	4.9180788932265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGCCCCTTTTTATG	50419369	False	NA	16	True	NA	NA	NA	50419769	50428933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_50186.nic	chr19	+	1577	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	852	2323	832	2	3prime_fragment	FALSE	canonical	3	59	junction_4	4.9180788932265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTTGTCATGTCTGA	50419534	True	NA	20	True	NA	NA	NA	50419789	50428991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_50188.known	chr19	+	3467	27	FSM	ENSG00000062822.16	ENST00000599857.7	3467	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	159.855722672058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTGTGGTCTCTGGGG	50369493	True	NA	22	True	AATAAA	-22	NA	50384322	50418018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_50189.known	chr19	+	3604	28	FSM	ENSG00000086967.10	ENST00000357701.6	3604	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	3.40337926152893	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGAGTGTCTGTCCTTC	50432800	True	NA	8	True	AAAACA	-13	NA	50432891	50466321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50432973_50435160_50435251_50435775_50435863_50436011_50436161_50436616_50436735_50437472_50437522_50437658_50437719_50440879_50441077_50442180_50442314_50443493_50443619_50443710_50443817_50445879_50446053_50448224_50448391_50450828_50450936_50451279_50451310_50451863_50452004_50454019_50454180_50454264_50454370_50455107_50455297_50455509_50455645_50458586_50458755_50458917_50459007_50459110_50459307_50460039_50460180_50461541_50461702_50461899_50462037_50464345_50464533_50466194
transcript_5019.known	chr1	-	6571	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	7.86694914747063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCTGTCTCAAAAAA	-84573466	True	NA	-21	True	AATAAA	-20	NA	84574440	84549610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
transcript_50190.known	chr19	+	2014	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_6	33.8640740343521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	50467561	True	NA	31	True	ATTAAA	-23	NA	50476498	50483351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_50193.known	chr19	+	9439	7	FSM	ENSG00000161671.17	ENST00000334976.11	9439	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.3749298538977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGATACACTGATATT	50467569	True	NA	4	True	AATAAA	-16	NA	50476506	50490871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_50197.known	chr19	-	653	5	FSM	ENSG00000142530.11	ENST00000602178.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	23.0271578793389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50475584	True	NA	NA	False	AATAAA	-22	NA	50476271	50466787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50466956_50467621_50467733_50475324_50475456_50475832_50475934_50476129
transcript_50199.nic	chr19	-	1241	5	NIC	ENSG00000142530.11	novel	1375	5	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	22.9823301690668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476792	False	NA	NA	False	AATAAA	-22	NA	50476811	50466787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_50466956_50467621_50467733_50475324_50475504_50475832_50475934_50476129
transcript_50200.known	chr19	-	1225	5	FSM	ENSG00000142530.11	ENST00000595790.5	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	6.67083203206317	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476727	False	NA	NA	False	AATAAA	-22	NA	50476746	50466787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50466956_50467621_50467830_50475324_50475456_50475832_50475934_50476129
transcript_50202.known	chr19	-	1375	5	FSM	ENSG00000142530.11	ENST00000600100.6	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	11.0538454847171	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476719	True	NA	NA	False	AATAAA	-22	NA	50476848	50466787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476129
transcript_50204.known	chr19	-	802	5	FSM	ENSG00000161677.12	ENST00000601423.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	7.08431365765238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-50511084	False	NA	0	True	AATAAA	-18	NA	50511162	50505997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511116
transcript_50206.known	chr19	-	733	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	8.64098759787715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	-50511105	True	NA	-4	True	AATAAA	-14	NA	50511220	50506001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
transcript_5021.known	chr1	-	2892	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	10.1862652625975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	NA	False	NA	2	True	AATAAA	-23	NA	84574480	84553120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
transcript_50213.known	chr19	-	971	5	FSM	ENSG00000167747.16	ENST00000597493.6	1570	5	0	599	0	17	multi-exon	FALSE	canonical	3	24	junction_4	1073.84391323879	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGGATAAGTGGGC	-50781950	True	NA	NA	False	NA	NA	NA	50804620	50798302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50804571
transcript_50221.nic	chr19	-	1440	4	FSM	ENSG00000167747.16	ENST00000693315.1	1450	4	10	0	-9	0	multi-exon	FALSE	canonical	3	127	junction_1	879.870571290018	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50781959	True	NA	-18	True	CATAAA	-19	NA	50804629	50797703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799271_50799358_50802216_50802258_50804571
transcript_50224.known	chr19	-	782	4	FSM	ENSG00000167747.16	ENST00000601267.5	782	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1032.24587940837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCCACCAGGCTCATG	-50804198	False	NA	NA	False	NA	NA	NA	50804558	50798373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804466
transcript_50225.known	chr19	-	1718	4	FSM	ENSG00000167747.16	ENST00000641834.2	1735	4	0	17	0	0	multi-exon	FALSE	canonical	3	1177	junction_3	481.072644087033	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50804569	True	NA	-18	True	CATAAA	-19	NA	50804929	50797703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804571
transcript_5023.known	chr1	+	724	3	FSM	ENSG00000117133.11	ENST00000370656.5	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_1	26	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGCTCACTGCACCCT	84472907	True	NA	NA	False	NA	NA	NA	84479258	84483330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84479510_84480955_84481013_84482914
transcript_50230.known	chr19	-	892	3	FSM	ENSG00000167747.16	ENST00000597705.6	1394	3	0	502	0	-12	multi-exon	FALSE	canonical	3	61	junction_1	558	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATACGCCACCGTGAGAC	-50804309	False	NA	NA	False	NA	NA	NA	50804669	50798205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50802216_50802258_50804571
transcript_50235.nic	chr19	-	2083	3	NIC	ENSG00000167747.16	novel	1450	4	NA	NA	-30	0	intron_retention	FALSE	canonical	3	1177	junction_2	552.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50804599	True	NA	-18	True	CATAAA	-19	NA	50804959	50797703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_50799358_50802216_50802258_50804571
transcript_50237.known	chr19	-	912	3	FSM	ENSG00000167748.11	ENST00000596300.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAAGCCTTCTGTCGCC	-50820574	False	NA	NA	False	GGGGCT	-19	NA	50820849	50819270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50819350_50819898_50820036_50820153
transcript_50238.known	chr19	-	1708	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_5	2.28035085019828	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	-50968949	True	NA	1	True	AATAAA	-19	NA	50968972	50958630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
transcript_50239.known	chr19	-	1324	7	FSM	ENSG00000129455.15	ENST00000600767.5	1324	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	11.1168040971015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	NA	False	NA	0	True	AATAAA	-19	NA	51002711	50996007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51000423_51000584_51001097_51001176_51001531_51001710_51002407
transcript_5024.known	chr1	-	806	4	FSM	ENSG00000174021.12	ENST00000370645.9	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1645.19347055462	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCATTATTATTGGT	-84506531	False	NA	-11	True	AATAAA	-18	NA	84506581	84498324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84498549_84501825_84501971_84506010_84506302_84506435
transcript_50242.known	chr19	-	481	4	FSM	ENSG00000129455.15	ENST00000594669.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	13.0724477007517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCAGACCCCTGTGGG	-51000908	True	NA	NA	False	NA	NA	NA	51001126	50996159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51001097
transcript_50243.nic	chr19	-	545	3	ISM	ENSG00000129455.15	ENST00000347619.8	555	4	367	-1	-134	0	3prime_fragment	FALSE	canonical	2	6	junction_2	14	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	-51001267	False	NA	0	True	AATAAA	-19	NA	51001301	50996007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_50996215_50997750_50997885_51001097
transcript_50244.known	chr19	-	456	3	FSM	ENSG00000129455.15	ENST00000320838.9	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	-51001668	True	NA	0	True	AATAAA	-19	NA	51001702	50996007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_51001097_51001176_51001531
transcript_50245.known	chr19	-	1365	6	FSM	ENSG00000167754.13	ENST00000593428.5	1365	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.03315017762062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-50953033	True	NA	-4	True	AATAAA	-14	NA	50953093	50943302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952949
transcript_50246.known	chr19	-	1513	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	3.03315017762062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-50952978	True	NA	-4	True	AATAAA	-14	NA	50953038	50943302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
transcript_50247.known	chr19	-	267	2	FSM	ENSG00000129455.15	ENST00000593490.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTCCTTGCCTGTC	-51000949	True	NA	-10	True	AATAAA	-9	NA	51001167	50996017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_51001097
transcript_50248.known	chr19	-	2984	6	FSM	ENSG00000129451.12	ENST00000358789.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	14.0939703419583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTACTTGATAATG	-51019668	True	NA	NA	False	NA	NA	NA	51019709	51012738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51019042_51019140_51019626
transcript_5025.known	chr1	-	920	3	FSM	ENSG00000174021.12	ENST00000370641.3	920	3	0	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_2	33.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTGCATTATTAT	-84506515	False	NA	-15	True	AATAAA	-14	NA	84506565	84498328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84498549_84501825_84501971_84506010
transcript_50250.known	chr19	-	1428	5	FSM	ENSG00000129451.12	ENST00000601467.1	1428	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.7559512565887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCACCCAACCTGACTT	-51018808	False	NA	NA	False	NA	NA	NA	51018849	51014509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51018454
transcript_50252.nic	chr19	-	1594	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1243	-245	-284	245	3prime_fragment	FALSE	canonical	3	28	junction_2	6.48074069840786	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCCCGGTGAAAGCGT	-51017565	False	41	1	True	ACTAAA	-24	NA	51017606	51014264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_50253.nic	chr19	-	1216	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1547	-171	20	171	3prime_fragment	FALSE	canonical	3	28	junction_2	6.48074069840786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTGTCATGTAAGGC	-51016948	True	NA	0	True	NA	NA	NA	51017302	51014338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_50257.known	chr19	-	1820	5	FSM	ENSG00000167759.13	ENST00000595793.6	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5.11737237261468	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	-51064955	True	NA	-3	True	AATAAA	-20	NA	51065092	51055625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015
transcript_50259.nic	chr19	-	2118	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	546	154	546	-149	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGTGCCAGTGAAGA	-51338470	True	NA	-2	True	AATAAA	-20	NA	51339209	51331689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_50260.nic	chr19	-	1996	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	546	276	546	-271	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGACTCTCTCTCTAA	-51338470	True	NA	-5	True	CATAAA	-19	NA	51339209	51331811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_50264.known	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	16.1938259839977	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-51356720	True	NA	-20	True	AATAAA	-19	NA	51366388	51345168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_50268.known	chr19	-	575	5	FSM	ENSG00000105379.10	ENST00000596253.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	322.468118579186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACGGCCGGCGTCAAG	-51356698	True	NA	-136	True	NA	NA	NA	51366366	51345284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51354149_51354309_51366269
transcript_5027.known	chr1	-	5752	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_13	26.6815540297747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTGGAATGAATG	-84688352	True	NA	NA	False	AATACA	-17	NA	84690461	84643705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_50272.known	chr19	-	788	2	FSM	ENSG00000262874.2	ENST00000570516.1	788	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGGCCCAGAGTGAT	-51390188	True	NA	NA	False	NA	NA	NA	51390563	51388936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51389510_51390348
transcript_50273.known	chr19	-	1335	2	FSM	ENSG00000262874.2	ENST00000574814.2	1335	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCGTGTGTGCGCGCGC	-51390216	True	NA	-22	True	AATAAA	-19	NA	51390591	51388288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51389510_51390477
transcript_50276.known	chr19	+	1239	2	FSM	ENSG00000105497.8	ENST00000545217.5	1239	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTGTGAGATTATATAT	51571017	True	NA	NA	False	AATAAA	-26	NA	51571297	51574210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51571476_51573149
transcript_50277.known	chr19	+	759	6	FSM	ENSG00000182310.15	ENST00000572160.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.08604962188118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAACTCTAGATTG	51702498	True	NA	-7	True	AATAAA	-4	NA	51702535	51705175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51702653_51703020_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
transcript_50278.nic	chr19	+	777	5	ISM	ENSG00000182310.15	ENST00000573266.5	1960	8	9555	0	34	0	3prime_fragment	FALSE	canonical	3	14	junction_2	5.78791845139511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51702836	True	NA	8	True	AATAAA	-19	NA	51702898	51705190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_51703099_51703227_51703336_51704029_51704187_51704269_51704481_51705089
transcript_50280.nic	chr19	+	779	5	ISM	ENSG00000182310.15	ENST00000572160.5	759	6	363	-15	34	0	3prime_fragment	FALSE	canonical	2	14	junction_2	5.78791845139511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51702836	True	NA	8	True	AATAAA	-19	NA	51702898	51705190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
transcript_50281.known	chr19	+	660	4	FSM	ENSG00000182310.15	ENST00000573151.5	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.64997911442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51703082	False	NA	8	True	AATAAA	-19	NA	51703144	51705190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51703336_51704029_51704187_51704269_51704481_51705089
transcript_50282.known	chr19	+	500	3	FSM	ENSG00000182310.15	ENST00000576975.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51703977	True	NA	8	True	AATAAA	-19	NA	51703998	51705190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51704187_51704269_51704481_51705089
transcript_50285.nic	chr19	-	942	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	57.5591975664167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTCCATTCTTTGT	-51887444	True	NA	1	True	NA	NA	NA	51887951	51855801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887843
transcript_50287.known	chr19	-	1865	7	FSM	ENSG00000161551.15	ENST00000640955.1	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	49.5067335487473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	-51887444	True	NA	-7	True	AAAAAG	-41	NA	51887951	51855809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_50289.known	chr19	-	7308	7	FSM	ENSG00000161551.15	ENST00000301399.12	7308	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	65.5500233070558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-51887444	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887895
transcript_50290.known	chr19	-	3192	5	FSM	ENSG00000198093.11	ENST00000354957.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	28.2699044922334	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-51898639	True	NA	-9	True	AATAAA	-15	NA	51905017	51889234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_50291.known	chr19	+	1938	2	FSM	ENSG00000171049.9	ENST00000340023.7	1938	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTTGTGTTTTCTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	51761179	51770531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51761231_51768644
transcript_50296.nic	chr19	+	2244	6	NIC	ENSG00000176024.18	novel	3165	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	40.4405736853472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	51926284	True	NA	9	True	AATAAA	-15	NA	51927451	51945752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_51927541_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_50299.known	chr19	+	3165	6	FSM	ENSG00000176024.18	ENST00000293471.11	3165	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	18.4108663565841	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGCCATGCTCTTAA	51926304	True	NA	NA	False	TATAAA	-41	NA	51927471	51946621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_5030.known	chr1	-	1933	13	FSM	ENSG00000117155.17	ENST00000605755.5	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	47.3675785743793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGTGTGTCATAAAG	-84688335	True	NA	-43	True	NA	NA	NA	84690444	84647375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690370
transcript_50302.known	chr19	+	606	5	FSM	ENSG00000176024.18	ENST00000599683.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	49.8616836859727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGGCAAAATCATGATAC	51926280	True	NA	NA	False	NA	NA	NA	51927447	51944246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51929731_51929897_51940208_51940336_51940616_51940710_51944118
transcript_50303.known	chr19	+	542	5	FSM	ENSG00000176024.18	ENST00000600853.1	542	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.8162382557533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTGAAGAGAGTGGA	51926306	True	NA	NA	False	AAGAAA	-37	NA	51927473	51944165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_50310.known	chr19	-	2355	5	FSM	ENSG00000256683.7	ENST00000243644.9	2355	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	7.29297607290741	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTGTACCTTGTCCT	-51986308	True	NA	-2	True	ATTAAA	-18	NA	51986840	51964339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51966215_51968577_51968674_51969004_51969132_51974345_51974532_51986769
transcript_50312.known	chr19	-	869	5	FSM	ENSG00000256683.7	ENST00000601430.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	23.1138486626524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAATTAGAGAAGCATCA	-51986324	True	NA	NA	False	AAAACA	-1	NA	51986856	51965855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51966215_51968577_51968674_51969004_51969146_51974345_51974532_51986769
transcript_50315.known	chr19	-	1601	2	FSM	ENSG00000256683.7	ENST00000597555.1	1601	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-51986273	True	NA	NA	False	NA	NA	NA	51986805	51972966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51974532_51986769
transcript_50316.known	chr19	-	4075	7	FSM	ENSG00000197619.15	ENST00000598071.6	4075	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	8.77021474461525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGTGTGAGCACAATT	-52007228	True	NA	-1	True	AATAAA	-26	NA	52008211	51991331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52007292_52007331_52008140
transcript_50317.known	chr19	-	4020	6	FSM	ENSG00000197619.15	ENST00000594083.5	4020	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.46838465151849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTTGTGTGAGCACAA	-52007213	True	NA	-3	True	AATAAA	-24	NA	52008196	51991333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_50318.known	chr19	-	577	6	FSM	ENSG00000197619.15	ENST00000593650.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.6440463206484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTGAGTTTAATAGAG	-52007217	True	NA	NA	False	NA	NA	NA	52008200	51994614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52007292_52007331_52008140
transcript_5032.known	chr1	-	3044	14	FSM	ENSG00000153898.13	ENST00000370608.8	3044	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	4.10656855847358	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATTCTTACTATTTT	-84996762	True	NA	-1	True	AATAAA	-19	NA	84997113	84925582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84926722_84929557_84929680_84931361_84931569_84937754_84937878_84937980_84938083_84939552_84939703_84940878_84940992_84947032_84947133_84952242_84952340_84952445_84952531_84956430_84956585_84958528_84958703_84965548_84965709_84996795
transcript_50321.known	chr19	-	1293	6	FSM	ENSG00000142556.19	ENST00000356322.10	1293	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.6972034919412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTCTTTTATTC	-52026030	True	NA	NA	False	AATATA	-1	NA	52028349	52012764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52013253_52017116_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_50322.known	chr19	-	1031	6	FSM	ENSG00000142556.19	ENST00000595189.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.4039680977599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAGAAACCCCATGC	-52026018	True	NA	NA	False	ACTAAA	-31	NA	52028337	52017000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52017360_52017575_52017698_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_50323.known	chr19	-	4628	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.3970762682174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	-52026060	True	NA	-5	True	AATAAA	-17	NA	52028379	52013323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_50325.known	chr19	-	4637	5	FSM	ENSG00000256087.7	ENST00000221315.10	4637	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.73861278752583	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGCGAACGTTAAGTT	-52048331	True	NA	0	True	AATAAA	-27	NA	52048838	52031377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52035441_52040487_52040584_52041479_52041607_52046853_52047061_52048694
transcript_5033.known	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	80.7066016850887	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250206	True	NA	-3	True	ATTAAA	-16	NA	85259672	85249952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
transcript_50330.known	chr19	-	2563	5	FSM	ENSG00000204611.7	ENST00000330123.9	2563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.6211851727154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTCCTACTTACTGATA	-52137349	False	NA	NA	False	NA	NA	NA	52139746	52114789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52117025_52122359_52122458_52123922_52124050_52130500_52130589_52139731
transcript_50331.known	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	8.04155872120988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-52137541	True	NA	-24	True	ATTAAA	-1	NA	52139938	52113090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
transcript_50334.known	chr19	-	808	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTTTCATTTCCCAT	-52170757	True	NA	0	True	AATAAA	-19	NA	52171643	52160320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
transcript_50335.nnic	chr19	-	807	4	NNC	ENSG00000196267.14	novel	4076	5	NA	NA	-9	-2245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.6363322667334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGTCTTTTTCTTTT	-52170744	True	NA	NA	False	AATATA	-1	NA	52171630	52162565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52162849_52168057_52168153_52169647_52169782_52171335
transcript_50341.known	chr19	+	5352	15	FSM	ENSG00000105568.18	ENST00000322088.11	5352	15	0	0	0	0	multi-exon	FALSE	canonical	3	2849	junction_4	174.225296904992	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCTTCCCCGCTCTCT	52153322	True	NA	NA	False	AATAAA	-26	NA	52190051	52229518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259_52211493_52212685_52212834_52212954_52213111_52215778_52215894_52216003_52216075_52216528_52216664_52219690_52219865_52220188_52220250_52220978_52221134_52222098_52222242_52225716_52225809_52225964
transcript_50348.known	chr19	+	688	4	FSM	ENSG00000105568.18	ENST00000468280.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	3062	junction_1	45.536310297998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCACTTAGGAATTGA	52153384	False	NA	NA	False	NA	NA	NA	52190113	52211694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259
transcript_50349.known	chr19	+	444	2	FSM	ENSG00000105568.18	ENST00000477989.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTGTAAGGGCTCGA	52153361	True	NA	NA	False	AATAAA	-17	NA	52190090	52191404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52190175_52191044
transcript_50353.known	chr19	+	2150	6	FSM	ENSG00000167554.15	ENST00000321287.12	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7.60526133673262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTCTTTTTTTTTTG	52335844	True	NA	6	True	AATAAA	-18	NA	52336244	52367122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52336507_52347706_52347832_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_50354.known	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.42928563989645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	52335842	True	NA	3	True	NA	NA	NA	52336242	52367778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_50357.known	chr19	+	4746	5	FSM	ENSG00000198464.14	ENST00000595962.6	4746	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	22.3313120975907	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACACCTTGTAAAACAT	52294416	True	NA	6	True	AATAAA	-18	NA	52297168	52325922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578
transcript_50360.known	chr19	+	6282	4	FSM	ENSG00000196214.11	ENST00000439461.6	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	40.6147209217982	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTCTTTGATTTCT	52264932	True	NA	20	True	AATAAA	-22	NA	52269586	52296046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52290065
transcript_50361.nic	chr19	+	462	4	NIC	ENSG00000198464.14	novel	4746	5	NA	NA	-48	70	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	53.8041716680862	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCAACCACAGTTCCT	52297110	False	NA	18	True	AATAAA	-22	NA	52297120	52321717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_52297224_52300393_52300485_52315833_52315963_52321578
transcript_50363.known	chr19	+	558	5	FSM	ENSG00000221923.9	ENST00000424032.6	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	130.044944153935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAACATGTCGAAAAAC	52366941	True	NA	-93	True	NA	NA	NA	52369916	52383969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420_52379541_52383848
transcript_50367.known	chr19	+	496	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	133.658769509025	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATTGAAGTTTGTTT	52366963	True	NA	9	True	AATAAA	-17	NA	52369938	52374717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
transcript_50369.known	chr19	+	953	4	FSM	ENSG00000221923.9	ENST00000600321.5	953	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	67.4405087630737	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGAGACAGGTTTT	52366960	True	NA	NA	False	NA	NA	NA	52369935	52380075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420
transcript_5037.known	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	123.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250196	True	NA	-3	True	ATTAAA	-16	NA	85259662	85249952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85252703_85258523_85258723_85259357
transcript_50371.known	chr19	+	2258	4	FSM	ENSG00000221923.9	ENST00000422689.3	2258	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	97.6296858314906	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTTTACATTTTATGA	52366947	True	NA	20	True	ATTAAA	-30	NA	52369922	52385795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52383848
transcript_50372.known	chr19	+	491	3	FSM	ENSG00000221923.9	ENST00000597976.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_1	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAAAACCACACTTTGA	52366970	True	NA	-78	True	NA	NA	NA	52369945	52374630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298
transcript_50376.known	chr19	-	929	5	FSM	ENSG00000269834.7	ENST00000596746.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.39509972887452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTCAGACACATTGGCA	-52397193	True	NA	NA	False	NA	NA	NA	52397766	52395526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52395751_52396315_52396500_52396609_52396753_52397194_52397268_52397461
transcript_50378.nic	chr19	-	998	4	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397211	True	NA	NA	False	ATTAAA	-19	NA	52397784	52388838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_52389304_52394790_52394848_52395597_52395751_52397461
transcript_50381.nnic	chr19	-	812	3	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	6	3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397178	True	NA	NA	False	ATTAAA	-19	NA	52397751	52388838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_52389304_52394790_52394848_52397461
transcript_50386.nic	chr19	+	1003	7	NIC	ENSG00000167555.14	novel	3994	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	8.49836585598798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTGCAATAATACTT	52397308	True	NA	NA	False	ATTAAA	-15	NA	52397848	52408512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52408225
transcript_50387.nic	chr19	+	1655	7	NIC	ENSG00000167555.14	novel	3994	7	NA	NA	0	652	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	8.49836585598798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTCTGACAAGTCTCT	52397308	True	NA	NA	False	AATATA	-20	NA	52397848	52409164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52408225
transcript_50388.known	chr19	+	3994	7	FSM	ENSG00000167555.14	ENST00000360465.8	3994	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.04745817062199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATGAATCGTGTTTT	52397308	True	NA	NA	False	AATAAA	-17	NA	52397848	52418401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52415123
transcript_50389.nnic	chr19	+	1324	7	NNC	ENSG00000167555.14	novel	3994	7	NA	NA	0	4496	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	9.92751507455695	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTCTTTGATTTCTT	52397308	True	NA	15	True	AATAAA	-24	NA	52397848	52422908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52422300
transcript_50390.known	chr19	+	740	3	FSM	ENSG00000288253.1	ENST00000594118.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTATTTTCATTTT	52453288	True	NA	NA	False	NA	NA	NA	52453579	52458507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52453608_52456867_52456959_52457886
transcript_50391.known	chr19	+	472	3	FSM	ENSG00000288253.1	ENST00000602221.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTCAGGTGAAAA	52453302	True	NA	NA	False	NA	NA	NA	52453593	52458286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52453608_52456867_52456959_52457919
transcript_50393.known	chr19	+	3585	5	FSM	ENSG00000198482.14	ENST00000359798.9	3585	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGAGATGGAGTGTC	52526754	True	NA	NA	False	NA	NA	NA	52527667	52556336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52547511_52547639_52553106
transcript_50395.known	chr19	+	5230	4	FSM	ENSG00000167562.14	ENST00000391785.8	5230	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.46337971105226	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTAATTTATAATGTA	52568093	True	NA	5	True	AATAAA	-16	NA	52570286	52587174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52570331_52574076_52574163_52575894_52576022_52582201
transcript_50398.known	chr19	-	2890	6	FSM	ENSG00000167766.20	ENST00000594682.6	2890	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	26.8253611345682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATCTGGAAAGGTTAC	-52689465	True	NA	-26	True	AATAAA	-15	NA	52690488	52612377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_50399.nnic	chr19	-	2620	5	NNC	ENSG00000167766.20	novel	2680	4	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	32.8519405819504	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATCTGGAAAGGTTACT	-52637235	True	NA	-25	True	AATAAA	-16	NA	52638379	52612376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52613685_52613768_52614798_52618935_52619063_52635065_52635154_52638311
transcript_504.known	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	460.068352409605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-2181845	True	NA	NA	False	NA	NA	NA	2194748	2191900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
transcript_50400.nic	chr19	-	693	5	ISM	ENSG00000167766.20	ENST00000596440.5	561	6	-84	122	-68	-85	5prime_fragment	FALSE	canonical	2	18	junction_2	29.8611369508932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACTTTCACTGTC	-52689549	True	NA	-2	True	ACTAAA	-44	NA	52690572	52618796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_50401.known	chr19	-	2726	4	FSM	ENSG00000167766.20	ENST00000536937.6	2680	4	-36	-10	-3	10	multi-exon	FALSE	canonical	3	46	junction_1	18.7082869338697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	-52637247	True	NA	-15	True	AATAAA	-26	NA	52638391	52612366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52638311
transcript_50404.known	chr19	-	728	3	FSM	ENSG00000167766.20	ENST00000601237.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTCAGGAGATCGAGA	-52637244	True	NA	NA	False	NA	NA	NA	52638388	52618499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52619063_52635065_52635154_52638311
transcript_50405.known	chr19	-	2599	3	FSM	ENSG00000167766.20	ENST00000301096.8	2553	3	-36	-10	-3	10	multi-exon	FALSE	canonical	0	0	junction_1	30.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	-52637247	True	NA	-15	True	AATAAA	-26	NA	52638391	52612366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52635065_52635154_52638311
transcript_50409.known	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	8.83176086632785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	-52785867	True	NA	NA	False	NA	NA	NA	52786807	52764549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
transcript_50410.known	chr19	-	333	2	FSM	ENSG00000189190.11	ENST00000599893.1	600	2	91	176	42	163	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTTGTAATTTATAATA	-52785760	False	NA	NA	False	AATAAA	-14	NA	52786700	52780828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52781056_52786594
transcript_50412.nnic	chr19	-	980	5	NNC	ENSG00000198538.11	novel	4558	4	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	51.9440805097174	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	NA	False	NA	-8	True	AATAAA	-22	NA	52821643	52797407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52798045_52805192_52805263_52808006_52808134_52817943_52818032_52821585
transcript_50414.known	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	30.7113578338699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	-52855971	True	NA	-5	True	AATAAA	-18	NA	52857649	52838535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
transcript_50416.known	chr19	-	4405	4	FSM	ENSG00000204604.13	ENST00000595646.6	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	15.7550697307953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAACAGGGTCTAG	-52855941	True	NA	NA	False	AATAAA	-21	NA	52857619	52838009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52842152_52849086_52849214_52854257_52854346_52857571
transcript_50417.known	chr19	-	394	3	FSM	ENSG00000198538.11	ENST00000464469.2	394	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACTTTCACTGTC	-52821580	True	NA	NA	False	ACTAAA	-44	NA	52821633	52807875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52808134_52817943_52818032_52821585
transcript_50418.nic	chr19	-	365	3	NIC	ENSG00000198538.11	novel	228	2	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	38.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	NA	False	NA	-18	True	ATTAAA	-8	NA	52821719	52814283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_52814427_52817943_52818032_52821585
transcript_50419.nic	chr19	-	279	3	Fusion	ENSG00000204604.13_ENSG00000198538.11	novel	228	2	NA	NA	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	-52855941	True	NA	-18	True	ATTAAA	-8	NA	52857619	52814283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_52814427_52817943_52818032_52857571
transcript_5042.known	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-85276608	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85267983_85270617_85270907_85276295
transcript_50421.nnic	chr19	-	1451	7	NNC	ENSG00000182986.15	novel	3897	6	NA	NA	4	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.0812892135702	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGAGTTTTCGTTTT	-52894845	True	NA	-5	True	AATACA	-22	NA	52897645	52861054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52861605_52863798_52864160_52873991_52874073_52888126_52888254_52890240_52890329_52891228_52891347_52897519
transcript_50422.nnic	chr19	-	1379	7	NNC	ENSG00000182986.15	novel	3168	8	NA	NA	-8	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.504937729801	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGAGTTTTCGTTTT	-52894901	True	NA	-5	True	AATACA	-22	NA	52897701	52861054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52861605_52863798_52864160_52873991_52874073_52888126_52888254_52890240_52890329_52891228_52891347_52897647
transcript_50435.known	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	17.5941909605289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	-52962139	True	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
transcript_50436.known	chr19	-	2560	4	FSM	ENSG00000180257.14	ENST00000444460.7	2560	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	11.323525167642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATTGACATTAGAGTT	-52962109	True	NA	-32	True	AATAAA	-23	NA	52962881	52949384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962726
transcript_50437.known	chr19	-	2341	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-52942227	True	NA	NA	False	NA	NA	NA	52942601	52927134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52929415_52942540
transcript_50440.known	chr19	-	495	1	FSM	ENSG00000213801.4	ENST00000550843.1	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTGGCAAATCCTTTA	NA	False	NA	2	True	NA	NA	NA	52929397	52928902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52928900_52929400
transcript_50441.known	chr19	-	2697	5	FSM	ENSG00000180257.14	ENST00000357666.8	2697	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	25.1632172028936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATTAGAGTTGATTCA	-52962089	True	NA	-26	True	AATAAA	-29	NA	52962861	52949378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52960026_52960178_52962726
transcript_50442.known	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	6.68331255192114	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	-52993184	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
transcript_50447.known	chr19	-	1926	6	FSM	ENSG00000170949.18	ENST00000599247.5	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	65.7419196555744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATTCTGGAGAGAA	-53101456	True	NA	NA	False	NA	NA	NA	53103393	53068865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091636_53091721_53103264
transcript_50450.known	chr19	-	583	5	FSM	ENSG00000170949.18	ENST00000596966.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	42.39914503855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTGTAAACCATGATAA	-53101479	True	NA	NA	False	NA	NA	NA	53103416	53085939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53086110_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_50454.known	chr19	-	2469	5	FSM	ENSG00000170954.12	ENST00000597503.5	2469	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	16.695807857064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131818	True	NA	-1	True	ATTAAA	-23	NA	53132886	53107878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132748
transcript_50457.known	chr19	-	2258	5	FSM	ENSG00000170954.12	ENST00000598578.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.5657614979833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATCAAAATGTGTAAAC	-53131813	True	NA	NA	False	NA	NA	NA	53132881	53108100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53115703_53115925_53116312_53116434_53122661_53122744_53132855
transcript_50458.known	chr19	-	589	5	FSM	ENSG00000170954.12	ENST00000601110.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	20.2036506602149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACAAAGTGACTACGGC	-53131836	True	NA	NA	False	AATACA	-38	NA	53132904	53109726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53123500_53123656_53132855
transcript_5046.known	chr1	+	2278	5	FSM	ENSG00000142871.18	ENST00000451137.7	2278	5	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	34.5723878261251	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATTTAAGAAAACAG	85564433	True	NA	NA	False	AATAAA	-16	NA	85580760	85583950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415_85582625_85582739
transcript_50461.known	chr19	-	2812	5	FSM	ENSG00000197937.13	ENST00000601469.2	2812	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	11.4537111889553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAACATGGCGAAACCC	-53158484	True	NA	NA	False	NA	NA	NA	53159053	53140109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53142557_53148680_53148813_53149240_53149368_53153732_53153794_53159008
transcript_50465.nic	chr19	-	2413	4	NIC	ENSG00000170954.12	novel	580	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	16.6799946709291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131836	True	NA	-1	True	ATTAAA	-23	NA	53132904	53107878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53109909_53116312_53116434_53122403_53122617_53132855
transcript_50466.known	chr19	-	2402	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	16.3571255285137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGTCTCAGATTTTA	-53131850	True	NA	-2	True	ATTAAA	-22	NA	53132918	53107879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
transcript_50467.known	chr19	-	2288	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	7.78888096369861	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131842	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
transcript_50473.known	chr19	-	2132	3	FSM	ENSG00000170954.12	ENST00000601493.5	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131807	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53122661_53122744_53132855
transcript_50476.known	chr19	-	604	3	FSM	ENSG00000197937.13	ENST00000595710.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCCCTCCTCATGTA	-53158506	True	NA	NA	False	NA	NA	NA	53159075	53148891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53149368_53153732_53153794_53159008
transcript_50477.known	chr19	-	2479	6	FSM	ENSG00000170954.12	ENST00000595193.5	2479	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.6547581061776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131827	True	NA	-1	True	ATTAAA	-23	NA	53132895	53107878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53115209_53115308_53115703_53115812_53116312_53116434_53122661_53122744_53132855
transcript_50478.known	chr19	-	2496	4	FSM	ENSG00000170954.12	ENST00000500065.8	2496	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5941909605289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGGTTGTCTCAGATT	-53131820	True	NA	-5	True	ATTAAA	-19	NA	53132888	53107882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53116312_53116434_53122403_53122613_53132748
transcript_50480.known	chr19	-	4158	4	FSM	ENSG00000197497.11	ENST00000396424.5	4158	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.2659863237109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAATGAATCATTTCTT	-53193025	True	NA	NA	False	AATAAA	-19	NA	53193358	53162423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53166348_53175444_53175572_53182883_53182944_53193311
transcript_50482.nnic	chr19	-	1004	4	NNC	ENSG00000197497.11	novel	552	3	NA	NA	2	631	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.79271573232759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCATTTGGCTCCTGT	-53193051	True	NA	-7	True	AATAAA	-23	NA	53193384	53178936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_53179349_53179525_53179985_53182883_53182944_53193311
transcript_50485.known	chr19	+	197	3	ISM	ENSG00000269001.3	ENST00000691047.1	2921	5	73	9360	73	-337	5prime_fragment	FALSE	canonical	3	6	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGTGGAAATGCCTG	53196657	False	NA	NA	False	NA	NA	NA	53197185	53204055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_53197263_53200623_53200704_53204015
transcript_50487.nnic	chr19	+	533	2	FSM	ENSG00000269001.3	ENST00000601072.2	538	2	5	0	-4	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTTGGGCCAGCGTGG	53196578	True	NA	NA	False	AATAAA	-24	NA	53197106	53204392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53197263_53204015
transcript_50488.nnic	chr19	-	872	5	NNC	ENSG00000197928.11	novel	622	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	132.84295239116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	-53251883	True	NA	0	True	AATAAA	-24	NA	53254873	53238289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_53238558_53243709_53243898_53251535_53251606_53253085_53253157_53254598
transcript_5049.known	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	12.2181811501256	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-85703973	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_50490.nic	chr19	-	838	5	NIC	ENSG00000197928.11	novel	622	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	115.72164879572	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	-53251883	True	NA	0	True	AATAAA	-24	NA	53254873	53238289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_50491.known	chr19	-	622	5	FSM	ENSG00000197928.11	ENST00000594517.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	133.650664046237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	-53251698	False	NA	0	True	AATAAA	-24	NA	53254688	53238289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254629
transcript_50492.known	chr19	-	3512	5	FSM	ENSG00000197928.11	ENST00000598513.6	3512	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	104.633885524719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCGTGTGCCTTCCGTC	-53251883	True	NA	NA	False	AGTAAA	-27	NA	53254873	53235380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_50495.nic	chr19	-	3840	5	NIC	ENSG00000197928.11	novel	796	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	48	junction_1	119.031508433692	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAAAGCCTGTGGT	-53251883	True	NA	-8	True	AATAAA	-21	NA	53254873	53238595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_50496.known	chr19	-	796	5	FSM	ENSG00000197928.11	ENST00000599012.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	108.68417548107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTTAAAGTTCAGT	-53251870	True	NA	NA	False	NA	NA	NA	53254860	53241391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_50498.nnic	chr19	-	702	5	NNC	ENSG00000197928.11	novel	719	4	NA	NA	-25	1163	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	123.901926942239	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGCTTGACAGCTC	-53251933	True	NA	NA	False	AATAAA	-19	NA	53254923	53240228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_53240546_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_505.known	chr1	-	569	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	610.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181847	True	NA	-5	True	ATTAAA	-40	NA	2194750	2189547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2189782_2193638_2193911_2194687
transcript_50500.known	chr19	-	935	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	123.057913195373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-53251841	True	NA	NA	False	AAAAAG	-11	NA	53254831	53241923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_50501.nic	chr19	-	739	5	NIC	ENSG00000197928.11	novel	935	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	113.52752970095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-53251880	True	NA	NA	False	AAAAAG	-11	NA	53254870	53241923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_50502.nic	chr19	-	1076	5	NIC	ENSG00000197928.11	novel	935	5	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	115.452100457289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGTACACATT	-53251883	True	NA	NA	False	NA	NA	NA	53254873	53241934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_50503.known	chr19	-	701	5	FSM	ENSG00000197928.11	ENST00000598806.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	104.300946783814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAATACCAGCT	-53251889	True	NA	NA	False	AATACA	-23	NA	53254879	53242080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_50504.known	chr19	-	706	4	FSM	ENSG00000197928.11	ENST00000601413.5	706	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	104.455200391789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACGAGTGGTGGTTC	-53251831	True	NA	NA	False	TTTAAA	-35	NA	53254821	53243555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254598
transcript_50505.known	chr19	-	719	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	77.1275999021535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCGTAGCTGAACAAA	-53251856	True	NA	NA	False	NA	NA	NA	53254846	53243332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
transcript_50506.known	chr19	+	496	3	FSM	ENSG00000189348.6	ENST00000599085.1	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCAAAGCCCAGACCAC	NA	False	NA	NA	False	NA	NA	NA	53282289	53284349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53282327_53282808_53282918_53283999
transcript_50507.nnic	chr19	-	2144	3	NNC	ENSG00000269118.1	novel	1374	4	NA	NA	605	926	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTTTACAGGTGTTTTG	NA	False	NA	-6	True	AATAAA	-17	NA	53301521	53298124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_53299996_53300765_53300875_53301357
transcript_50509.known	chr19	+	6348	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	19.2527054375915	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGCGAGACTCTGTCT	53332273	True	NA	NA	False	NA	NA	NA	53333748	53356906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
transcript_50513.known	chr19	+	6133	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	13.490737563232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	53363622	True	NA	8	True	AATAAA	-28	NA	53365704	53386590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
transcript_50514.known	chr19	+	1868	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.8326666559997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	53363630	True	NA	-1	True	AATAAA	-19	NA	53365712	53386581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
transcript_50515.known	chr19	+	590	4	FSM	ENSG00000203326.12	ENST00000593918.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.9577420631132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATAATTCTGAGCCTT	53363646	True	NA	NA	False	TTTAAA	-10	NA	53365728	53392217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53391867
transcript_50518.known	chr19	+	7588	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	48.3804368176504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTAAATTTTATTATT	53391726	True	NA	4	True	AATAAA	-17	NA	53395172	53430413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
transcript_50520.known	chr19	+	2059	8	FSM	ENSG00000196417.13	ENST00000504235.5	2059	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	47.7254050345755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTTTTTAGAATTT	53391697	True	NA	NA	False	ATTAAA	-19	NA	53395143	53427321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061_53423503_53425070_53425148_53425329_53425452_53426017_53426937_53427086
transcript_50522.known	chr19	+	938	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.994399874554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428972	True	NA	12	True	AATAAA	-22	NA	53431992	53450331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_50523.nic	chr19	+	4142	6	Fusion	ENSG00000241015.2_ENSG00000160336.17	novel	4061	5	NA	NA	-36	0	multi-exon	FALSE	canonical	0	0	junction_2	119.676898355531	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	53428927	True	NA	29	True	AATATA	-22	NA	53431947	53458261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_50525.known	chr19	+	1538	6	FSM	ENSG00000160336.17	ENST00000651864.1	1538	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	127.662053876632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	53428963	True	NA	NA	False	AATAAA	-19	NA	53431983	53461862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53445000_53445220_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_50528.nic	chr19	+	836	5	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	116.440972170452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428951	True	NA	12	True	AATAAA	-22	NA	53431971	53450331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_50529.known	chr19	+	3983	5	FSM	ENSG00000160336.17	ENST00000684525.1	3983	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	97.2969038561865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	53428963	True	NA	29	True	AATATA	-22	NA	53431983	53458261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_50530.nic	chr19	+	1331	5	NIC	ENSG00000160336.17	novel	1538	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	128.201745307933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	53428951	True	NA	NA	False	AATAAA	-19	NA	53431971	53461862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_50531.nnic	chr19	+	760	4	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	133.312498372141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428916	True	NA	12	True	AATAAA	-22	NA	53431936	53450331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53449878
transcript_50532.nnic	chr19	+	3919	4	NIC	ENSG00000160336.17	novel	3983	5	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	118.467998491857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	53428916	True	NA	29	True	AATATA	-22	NA	53431936	53458261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53454649
transcript_50539.nnic	chr19	+	1276	3	NNC	ENSG00000241015.2	novel	2920	2	NA	NA	-12	301	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTTTGTCACATCCTA	53428951	True	NA	5	True	AATACA	-16	NA	53431971	53442908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_53432029_53439827_53439934_53441795
transcript_50542.known	chr19	+	2920	2	FSM	ENSG00000241015.2	ENST00000424846.3	2920	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	53428963	True	NA	28	True	NA	NA	NA	53431983	53444670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53441795
transcript_50550.known	chr19	+	5042	7	FSM	ENSG00000130844.19	ENST00000253144.13	5042	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	44.2681224660214	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53516951	True	NA	14	True	AATAAA	-17	NA	53521023	53580269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53522085_53522616_53522685_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_50552.known	chr19	+	1985	7	FSM	ENSG00000130844.19	ENST00000511593.6	1985	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	100.36378275498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGCCCTTCTGAGTAG	53521837	False	NA	30	True	AATAAA	-18	NA	53521855	53578081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53522085_53522616_53522685_53555844_53555909_53563762_53563793_53569303_53569386_53571603_53571731_53576696
transcript_50554.known	chr19	+	574	6	FSM	ENSG00000130844.19	ENST00000514374.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	89.6093745095902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGATGATCATCAATT	53537440	True	NA	NA	False	NA	NA	NA	53537684	53576859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53537756_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_50556.known	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	80.7415630267336	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53537750	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_50559.known	chr19	+	2161	5	FSM	ENSG00000130844.19	ENST00000512387.6	2161	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	96.2896022424021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAAAATCAT	53554404	True	NA	NA	False	AATGAA	-24	NA	53554498	53578389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53554694_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_5056.nic	chr1	-	2321	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	14.2340919977356	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	-86394986	False	NA	-10	True	AATAAA	-13	NA	86396346	86348736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_50562.known	chr19	+	572	3	FSM	ENSG00000130844.19	ENST00000649816.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	86.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	53521814	False	NA	-32	True	NA	NA	NA	53521832	53523515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53522085_53522616_53522685_53523263
transcript_50563.known	chr19	+	387	1	FSM	ENSG00000269564.1	ENST00000597420.1	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGTTTCTGGTCTATT	53788198	False	NA	13	True	AATAAA	-13	NA	53788781	53789168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53788800_53789200
transcript_50568.nnic	chr19	+	2056	4	NNC	ENSG00000179820.16	novel	3054	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.667557929078	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	53863194	True	NA	15	True	TATAAA	-11	NA	53867879	53876435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_53867944_53869753_53869839_53873527_53874812_53875812
transcript_50571.known	chr19	+	1579	3	FSM	ENSG00000179820.16	ENST00000421337.6	1579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	115.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTCTTTTCTTTTT	53865148	True	NA	NA	False	NA	NA	NA	53866152	53874756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53866418_53869753_53869839_53873527
transcript_50572.known	chr19	+	3054	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	105	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	53863197	True	NA	15	True	TATAAA	-11	NA	53867882	53876435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53867944_53869753_53869839_53873527
transcript_50573.known	chr19	+	2037	16	FSM	ENSG00000126583.12	ENST00000682268.1	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_15	17.3980841857181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAACCAAGGTTCAAA	53881170	True	NA	NA	False	AATACA	-4	NA	53882196	53903441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53903358
transcript_50576.nnic	chr19	+	1870	8	NNC	ENSG00000126583.12	novel	2997	19	NA	NA	4646	0	intron_retention	FALSE	canonical	3	11	junction_1	19.4841641612163	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGATATTTTCTTGT	53899080	True	NA	11	True	AATAAA	-21	NA	53899271	53907652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_53899572_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706
transcript_50581.nic	chr19	-	563	5	ISM	ENSG00000189068.11	ENST00000338372.7	967	9	21414	4	15940	0	3prime_fragment	FALSE	canonical	1	2	junction_3	1.6583123951777	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTGACTTATTTATGG	NA	False	NA	NA	False	AATAAA	-23	NA	54042483	54040828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_54041081_54041778_54041817_54041915_54041954_54042168_54042197_54042276
transcript_50582.nic	chr19	-	605	4	ISM	ENSG00000189068.11	ENST00000447872.5	1041	8	21450	0	15920	0	3prime_fragment	FALSE	canonical	0	0	junction_3	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTGACTTATTTATGG	NA	False	NA	NA	False	AATAAA	-23	NA	54042503	54040828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_54041081_54041778_54041817_54041915_54041954_54042226
transcript_50586.known	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	90.5830554840606	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	54102554	True	NA	15	True	ATTAAA	-16	NA	54115753	54131713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_50599.known	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	84.8966430431734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113915	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_5060.known	chr1	-	2155	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	19.992665321729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTAAGTAGTAGAT	-86394980	True	NA	-11	True	AATAAA	-12	NA	86396340	86348737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_50602.known	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	29.4957624075053	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	NA	False	NA	-7	True	AATAAA	-16	NA	54115657	54107019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_50606.known	chr19	-	737	5	FSM	ENSG00000105619.14	ENST00000420715.6	737	5	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_3	94.578010129205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113912	True	NA	-7	True	AATAAA	-16	NA	54115285	54107019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54114441_54114701_54115246
transcript_50608.known	chr19	+	338	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1612.80624998789	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086674	True	NA	17	True	AATAAA	-19	NA	54102868	54106965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
transcript_50610.known	chr19	+	379	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1589.30788570231	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086690	True	NA	13	True	AATAAA	-15	NA	54102884	54106961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
transcript_50613.known	chr19	+	435	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1359.99308362212	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086657	True	NA	13	True	AATAAA	-15	NA	54102851	54106961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
transcript_50614.known	chr19	+	445	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1382.72213405297	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086660	True	NA	13	True	AATAAA	-15	NA	54102854	54106961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
transcript_50615.known	chr19	+	541	3	FSM	ENSG00000170906.16	ENST00000484103.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_2	153	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086682	True	NA	13	True	AATAAA	-15	NA	54102876	54106961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54103189_54105933_54106012_54106810
transcript_50617.known	chr19	+	2818	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	48.2872747176104	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	32	True	AATAAA	-14	NA	54137761	54155681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_50619.known	chr19	-	1381	4	FSM	ENSG00000105617.4	ENST00000222224.4	1381	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	16.0831174424198	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTTCTTCTTGGGT	NA	False	NA	NA	False	NA	NA	NA	54159721	54155160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54155941_54156762_54157026_54158281_54158462_54159563
transcript_50621.known	chr19	-	2362	15	FSM	ENSG00000167608.12	ENST00000619895.5	2362	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	5.990213106495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54173160	54160107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172084_54173038
transcript_50627.nic	chr19	-	866	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-59	6082	31	-1019	5prime_fragment	FALSE	canonical	2	14	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCGCACGCCTGTAAT	NA	False	NA	NA	False	AATACA	-16	NA	54173219	54169189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_50628.nnic	chr19	-	508	3	NNC	ENSG00000167608.12	novel	2362	15	NA	NA	-5	-1991	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTGCTGGCTTCTTC	NA	False	NA	NA	False	AATAGA	-17	NA	54173165	54170161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_54170329_54171869_54172084_54173038
transcript_50629.known	chr19	-	450	2	FSM	ENSG00000167608.12	ENST00000611183.4	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54160649	54160107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54160375_54160466
transcript_50630.known	chr19	-	2294	8	FSM	ENSG00000125505.17	ENST00000245615.6	2294	8	0	0	0	0	multi-exon	TRUE	canonical	3	501	junction_2	87.2474781812036	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	NA	False	NA	-8	True	AATAAA	-14	NA	54189580	54173414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_50631.known	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	31	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	54189990	True	NA	12	True	AATAAA	-18	NA	54190342	54193666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54191965_54192115_54192374_54193174
transcript_50632.known	chr19	+	944	6	FSM	ENSG00000170889.14	ENST00000445961.5	944	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3936.73248265614	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102669	True	NA	26	True	AATAAA	-20	NA	54200871	54207647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_50633.known	chr19	+	772	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3716.94978275198	2609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102669	True	NA	26	True	AATAAA	-20	NA	54200871	54207647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_50634.known	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4876	junction_1	1672.59917493702	21434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102655	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_50635.known	chr19	+	510	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_3	3008.97402226517	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102671	True	NA	26	True	AATAAA	-20	NA	54200873	54207647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
transcript_50636.known	chr19	+	956	5	FSM	ENSG00000170889.14	ENST00000495002.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	3826.90952336216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGTGTGGGGGTCT	54102676	True	NA	23	True	AATAAA	-17	NA	54200878	54207644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206725_54207397
transcript_50637.known	chr19	+	476	5	FSM	ENSG00000170889.14	ENST00000626547.2	476	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	3305.17291529505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAACTCACCCAGA	54102655	True	NA	NA	False	NA	NA	NA	54200857	54206565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54206552
transcript_50638.known	chr19	+	709	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	638.75156011986	3299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54200893	False	NA	26	True	AATAAA	-20	NA	54201132	54207647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
transcript_50639.known	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	54199010	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54201282_54201486_54201610_54206275
transcript_50641.nic	chr19	-	437	2	ISM	ENSG00000167634.12	ENST00000590030.5	3209	9	11175	0	11173	0	3prime_fragment	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGCTGCGTTTATTGA	NA	False	NA	-6	True	AATAAA	-15	NA	54930577	54923514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_54923873_54930498
transcript_50642.known	chr19	-	1931	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.1043804953157	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACCCGAGTCGTAG	NA	False	NA	23	True	AAAAAG	-4	NA	55063217	55044323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_50648.known	chr19	+	745	2	FSM	ENSG00000131037.15	ENST00000587715.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCGTGCTTAGCAGA	55087017	False	NA	1	True	TATAAA	-1	NA	55087068	55087905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55087436_55087527
transcript_50649.known	chr19	-	830	4	FSM	ENSG00000125503.13	ENST00000590268.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	7.76029781788188	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCAAGAAGTGCAAGGAT	-55092255	True	NA	NA	False	NA	NA	NA	55092598	55091207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221
transcript_50653.known	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	360.172509620585	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_50660.known	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	364.501143116635	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_50667.nnic	chr19	-	1116	11	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	-27	3	combination_of_known_splicesites	TRUE	canonical	3	63	junction_10	291.093868021984	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145404	False	NA	-40	True	AATAAA	-15	NA	55146976	55132831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146659
transcript_50668.known	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_10	270.201942998195	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	-55143767	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
transcript_50670.nic	chr19	-	1261	11	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	-56	3	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	316.974778176435	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145433	False	NA	-40	True	AATAAA	-15	NA	55147005	55132831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146433_55146467_55146680
transcript_50673.nic	chr19	-	1083	10	NIC	ENSG00000105048.18	novel	995	10	NA	NA	-27	3	combination_of_known_junctions	FALSE	canonical	3	330	junction_9	200.408163752791	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145404	False	NA	-40	True	AATAAA	-15	NA	55146976	55132831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146659
transcript_50674.known	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	239.366808759699	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	-55143760	True	NA	-73	True	NA	NA	NA	55146942	55132864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
transcript_50676.nic	chr19	-	1199	10	NIC	ENSG00000105048.18	novel	995	10	NA	NA	-27	3	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	303.409066654896	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145404	False	NA	-40	True	AATAAA	-15	NA	55146976	55132831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146680
transcript_50683.nnic	chr19	-	998	9	NIC	ENSG00000105048.18	novel	995	10	NA	NA	-27	3	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	340.778520449866	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145404	False	NA	-40	True	AATAAA	-15	NA	55146976	55132831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55145543_55145566_55146680
transcript_50692.known	chr19	-	880	10	FSM	ENSG00000105048.18	ENST00000587089.6	880	10	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_8	288.080535721746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTCCCATCGGTAGC	-55144313	False	NA	-84	True	NA	NA	NA	55146454	55132875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146433
transcript_50694.known	chr19	-	669	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	115.275756341045	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGACTCCATGTCTAT	-55156463	False	NA	-7	True	AATAAA	-16	NA	55156725	55151770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
transcript_50698.known	chr19	-	699	4	FSM	ENSG00000129991.13	ENST00000585806.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	38.7843038125248	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	-55154340	True	NA	-3	True	AATAAA	-20	NA	55156481	55151766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200
transcript_50701.known	chr19	-	1020	4	FSM	ENSG00000167646.14	ENST00000587789.2	1020	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	15.9652400197707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTGGCTGACTAGGGG	-55160397	False	262	-92	True	NA	NA	NA	55160659	55158752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55159450_55159532_55159721_55159898_55160014_55160639
transcript_50703.known	chr19	-	2118	12	FSM	ENSG00000167646.14	ENST00000524407.7	2118	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	11.7318525236368	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCAAGCGTC	-55166351	True	NA	-4	True	AGTAAA	-17	NA	55166613	55158664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166522
transcript_50704.known	chr19	+	857	2	FSM	ENSG00000267649.1	ENST00000585911.1	857	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTACACAGCAATAAAAATA	55216637	True	NA	NA	False	GATAAA	-2	NA	55216659	55221616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55216710_55220809
transcript_50707.known	chr19	-	1635	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	0	0	0	multi-exon	TRUE	canonical	3	512	junction_7	79.0207929236711	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-55275505	True	NA	-3	True	AATAAA	-22	NA	55280110	55262222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_50713.known	chr19	+	605	5	FSM	ENSG00000160472.5	ENST00000291934.4	605	5	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	2.58602010819715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	55376767	True	NA	NA	False	AATACA	-16	NA	55376825	55378246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55376912_55376990_55377027_55377592_55377719_55377801_55377887_55377974
transcript_50714.nic	chr19	+	688	3	ISM	ENSG00000160472.5	ENST00000291934.4	605	5	562	0	562	0	3prime_fragment	FALSE	canonical	2	9	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	55377329	False	NA	NA	False	AATACA	-16	NA	55377387	55378246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_55377719_55377801_55377887_55377974
transcript_50717.known	chr19	+	852	4	FSM	ENSG00000108107.15	ENST00000559463.5	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	6251	junction_3	158.966104004037	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	55255245	True	NA	29	True	AATAAA	-18	NA	55385960	55388373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55386439_55386569_55386694_55387929_55388049_55388242
transcript_50718.known	chr19	+	670	5	FSM	ENSG00000108107.15	ENST00000560055.5	670	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2633.03991376887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTGAGTTTTACGGCA	55255220	True	NA	NA	False	ATTAAA	-22	NA	55385935	55403250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55402942
transcript_50719.known	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	2625.08698665397	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	55255216	True	NA	40	True	TATAAA	-34	NA	55385931	55391803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
transcript_5072.known	chr1	-	1422	11	FSM	ENSG00000122417.15	ENST00000488879.6	1422	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	17.4610996217306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACCAAAAATAAAAA	-86394926	True	NA	NA	False	AGTAAA	-41	NA	86396286	86358816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
transcript_50720.known	chr19	+	1692	4	FSM	ENSG00000108107.15	ENST00000560881.5	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	3897	junction_1	1199.02071152531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCAATAAAGTCAGCT	55255227	True	NA	-1	True	NA	NA	NA	55385942	55388343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55388049_55388242
transcript_50723.known	chr19	-	1075	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	88.9390802740842	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-55455267	True	NA	-9	True	AATAAA	-17	NA	55461642	55452984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
transcript_50724.known	chr19	-	1122	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	129.499652509186	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-55455270	True	NA	-13	True	AATAAA	-13	NA	55461645	55452988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
transcript_50726.known	chr19	-	1566	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	86.1259978171516	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-55462324	False	NA	-9	True	AATAAA	-17	NA	55462343	55452984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
transcript_50727.nnic	chr19	-	931	5	NIC	ENSG00000063241.8	novel	1122	6	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	136.376317592168	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-55455289	True	NA	-13	True	AATAAA	-13	NA	55461664	55452988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55453389_55454988_55455107_55455259_55455379_55456348_55456490_55461511
transcript_50730.nnic	chr19	+	704	3	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	80	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	55483349	True	NA	37	True	AATAAA	-13	NA	55485187	55487566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_55485259_55485660_55485781_55487053
transcript_50731.known	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	55637513	True	NA	16	True	AATAAA	-18	NA	55643648	55645623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55643775_55644552
transcript_50732.known	chr19	+	1100	2	FSM	ENSG00000171425.10	ENST00000588537.1	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTCGAGGTTTGTTTT	55643694	True	NA	14	True	AATAAA	-16	NA	55643809	55645621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55643841_55644552
transcript_50735.nnic	chr19	+	1545	13	NNC	ENSG00000063244.13	novel	3022	12	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	23.9472800589591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620823	True	NA	33	True	ATTAAA	-23	NA	55654952	55674716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669170_55669443_55669693_55673933_55673963_55674633
transcript_50738.known	chr19	+	3022	12	FSM	ENSG00000063244.13	ENST00000450554.6	3022	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	15.5669707558149	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCGGCTGTGTGTCCA	55652826	True	NA	32	True	ATTAAA	-22	NA	55654145	55674715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669170_55669443_55669693_55673933
transcript_50739.known	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.2728975138735	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620905	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
transcript_50742.nnic	chr19	+	929	9	NNC	ENSG00000063244.13	novel	3022	12	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	26.943227349373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATGGAGCGGCTGTGTG	55620893	True	NA	28	True	ATTAAA	-18	NA	55655022	55674711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668534_55674633
transcript_50743.known	chr19	+	16219	11	FSM	ENSG00000063245.15	ENST00000270460.11	16219	11	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_8	83.227159028769	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAAACGTTCTTGTCT	55660007	True	NA	NA	False	ATTAAA	-21	NA	55675225	55709533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_50750.nic	chr19	-	2053	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	9.86711710683521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGTATAACGGAAAAC	-56314122	False	NA	-15	True	AATAAA	-21	NA	56314875	56221311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
transcript_50752.nnic	chr19	-	490	4	NNC	ENSG00000131848.10	novel	314	3	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.09120616516523	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	-56314122	False	NA	NA	False	AATAAA	-18	NA	56314875	56280601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_56280701_56313282_56313385_56314249_56314344_56314680
transcript_50753.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000591078.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGTGTTCCTCTACA	-56314106	True	NA	NA	False	AATAAA	-7	NA	56314859	56274503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56274909_56313282_56313385_56314680
transcript_50754.known	chr19	-	314	3	FSM	ENSG00000131848.10	ENST00000585670.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	-56314040	False	NA	NA	False	AATAAA	-18	NA	56314793	56280601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56280701_56313282_56313385_56314680
transcript_50756.known	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.0518654985033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	-56314086	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
transcript_50759.known	chr19	+	945	6	FSM	ENSG00000240225.10	ENST00000589844.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	49.0444696168691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAAGCCGTATGAATG	56367947	True	NA	NA	False	NA	NA	NA	56368138	56377366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_5076.known	chr1	-	648	6	FSM	ENSG00000122417.15	ENST00000394733.2	648	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	24.6381817510952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAAAGTAGTACATGA	-86394893	False	NA	NA	False	NA	NA	NA	86396253	86382325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86396032
transcript_50760.known	chr19	+	1989	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	40.2720746920245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTCGGGTGCATT	56366742	True	NA	24	True	ATTAAA	-14	NA	56368318	56378350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_50763.known	chr19	+	3393	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	29.6310647800581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	56366744	True	NA	26	True	AATAGA	-20	NA	56368320	56379828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_50765.nic	chr19	-	956	5	NIC	ENSG00000018869.18	novel	625	5	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.0647426304539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	-56393140	True	NA	-4	True	AATAAA	-15	NA	56393587	56375845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_50766.known	chr19	-	733	5	FSM	ENSG00000018869.18	ENST00000587778.5	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	6.86931583201704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTCCTTATTAAT	-56392881	False	NA	0	True	AATAAA	-20	NA	56393328	56384872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_50767.known	chr19	-	712	5	FSM	ENSG00000018869.18	ENST00000593145.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	15.1554445662277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGCAAAAGGAACTC	-56393091	True	NA	-9	True	AATAAA	-11	NA	56393538	56384881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_50774.nnic	chr19	+	1095	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	9.19238815542512	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392972	True	NA	20	True	AATAAA	-14	NA	56393673	56399168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_56394054_56394216_56394442_56397880_56397989_56398276_56398384_56398893
transcript_50776.nic	chr19	+	1155	5	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	9.19238815542512	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392972	True	NA	20	True	AATAAA	-14	NA	56393673	56399168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_56394054_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_50777.nnic	chr19	+	1163	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	14.9415527974839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392992	True	NA	20	True	AATAAA	-14	NA	56393693	56399168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_56394082_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_50780.nic	chr19	+	1383	4	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	-12	0	intron_retention	FALSE	canonical	3	34	junction_1	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392972	True	NA	20	True	AATAAA	-14	NA	56393673	56399168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_56394054_56394216_56394442_56397880_56398384_56398893
transcript_50781.nic	chr19	+	897	4	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	16.4991582276861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56393005	True	NA	20	True	AATAAA	-14	NA	56393706	56399168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_56394054_56397880_56398049_56398276_56398384_56398893
transcript_50783.known	chr19	+	1274	4	FSM	ENSG00000267454.6	ENST00000589888.5	1274	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	10.5303793326209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56393016	True	NA	20	True	AATAAA	-14	NA	56393717	56399168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56394442_56397880_56398049_56398276_56398384_56398893
transcript_50784.known	chr19	-	3832	5	FSM	ENSG00000198046.13	ENST00000292069.10	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	7.94905654779232	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGTTGGGCTCTTCTGT	-56477319	False	NA	-4	True	AATAAA	-30	NA	56477374	56439324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56477271
transcript_50786.nic	chr19	+	751	3	FSM	ENSG00000166770.12	ENST00000693493.1	707	3	-44	0	-8	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56478084	False	NA	14	True	AATAAA	-19	NA	56478112	56495437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478294_56494162_56494343_56495047
transcript_50787.known	chr19	+	818	3	FSM	ENSG00000166770.12	ENST00000685306.1	1083	3	260	5	3	0	multi-exon	FALSE	canonical	3	41	junction_2	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56476866	True	NA	14	True	AATAAA	-19	NA	56478133	56495437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478382_56494162_56494343_56495047
transcript_50788.known	chr19	+	705	3	FSM	ENSG00000166770.12	ENST00000592146.4	730	3	24	1	-3	1	multi-exon	FALSE	canonical	3	20	junction_1	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTCCTTATTCTTT	56476878	True	NA	18	True	AATAAA	-23	NA	56478145	56495441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478277_56494162_56494343_56495047
transcript_50789.known	chr19	+	495	2	FSM	ENSG00000166770.12	ENST00000601875.2	1412	2	83	834	10	284	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAAGTACATTCACAT	56476972	True	NA	NA	False	AATGAA	-34	NA	56478239	56494603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478294_56494162
transcript_5079.known	chr1	-	311	2	FSM	ENSG00000122417.15	ENST00000486215.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCCAAATCTAGTATT	-86394617	False	NA	NA	False	TATAAA	-36	NA	86395977	86386808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86387087_86395944
transcript_50790.known	chr19	+	1475	2	FSM	ENSG00000166770.12	ENST00000669162.2	1499	2	24	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTCTTCCTTATTCTT	56476913	True	NA	17	True	AATAAA	-22	NA	56478180	56495440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478378_56494162
transcript_50791.nic	chr19	+	1410	2	FSM	ENSG00000166770.12	ENST00000691191.1	1435	2	20	5	2	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56476874	True	NA	14	True	AATAAA	-19	NA	56478141	56495437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478277_56494162
transcript_50792.known	chr19	-	326	3	FSM	ENSG00000267421.6	ENST00000590579.5	326	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGACAATACCTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	56538418	56536155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56536333_56537650_56537738_56538356
transcript_50793.known	chr19	-	2045	2	FSM	ENSG00000269696.3	ENST00000596587.2	2075	2	30	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCCCTCACCATGCTG	-56567346	True	NA	NA	False	AATAAA	-24	NA	56567411	56545565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56547272_56567072
transcript_50795.nnic	chr19	+	1360	7	NNC	ENSG00000197016.12	novel	1640	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.7076535402199	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGTATTTCTTTACA	56567406	False	NA	NA	False	ATTAAA	-18	NA	56567457	56588911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_56567527_56567874_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56588225
transcript_50797.known	chr19	+	758	3	FSM	ENSG00000197951.10	ENST00000594944.1	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	36	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTTTTTACTTCTTC	56594235	True	NA	NA	False	NA	NA	NA	56595334	56610543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56595429_56601506_56601592_56609964
transcript_50798.known	chr19	+	5428	3	FSM	ENSG00000197951.10	ENST00000328070.10	5428	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	56594200	True	NA	NA	False	NA	NA	NA	56595299	56626481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56595429_56601506_56601592_56621267
transcript_508.nnic	chr1	+	958	8	NNC	ENSG00000157916.20	novel	695	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	426.771745138991	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTCAAATTTTCTTTT	2381571	True	NA	19	True	CATAAA	-14	NA	2391838	2403216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_2391959_2393207_2393356_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_5080.known	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-86394963	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86387087_86396032
transcript_50800.known	chr19	+	1287	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	57230954	True	NA	7	True	AATAAA	-21	NA	57231022	57235548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_50801.known	chr19	+	1125	6	FSM	ENSG00000105146.14	ENST00000598785.5	1125	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.65329983228432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTCATAGTTGTGTGA	57231512	True	NA	6	True	AATAAA	-20	NA	57231618	57235547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_50803.known	chr19	+	3690	4	FSM	ENSG00000178229.8	ENST00000321545.5	3690	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAAAGCCTTTTTTAT	57319505	True	NA	NA	False	ATTAAA	-43	NA	57320471	57330770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57320872_57323681_57323809_57326632_57326729_57327703
transcript_50804.known	chr19	+	4987	4	FSM	ENSG00000188785.12	ENST00000336128.12	4987	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	12.3558353285671	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGTGTTCTCTATCT	57388920	True	NA	NA	False	ATTAAA	-15	NA	57389853	57402992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57390115_57394187_57394224_57397047_57397175_57398429
transcript_50808.known	chr19	+	2714	4	FSM	ENSG00000186272.13	ENST00000307658.12	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.44948974278318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGAAGTGTCCTGAG	57410371	True	NA	29	True	AATAAA	-26	NA	57411160	57421934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57411407_57413595_57413637_57417911_57418039_57419634
transcript_50810.known	chr19	-	737	3	FSM	ENSG00000197128.13	ENST00000600175.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCAGTTAGGTCACA	-57475928	True	NA	NA	False	NA	NA	NA	57477551	57466662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57467086_57476633_57476673_57477276
transcript_50811.known	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	57361376	True	NA	61	True	AATGAA	-21	NA	57363550	57365405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57363704_57364814
transcript_50814.known	chr19	+	433	2	FSM	ENSG00000186272.13	ENST00000599867.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCTTTACCTGCACCAA	57410373	True	NA	NA	False	NA	NA	NA	57411162	57419823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57411407_57419634
transcript_50816.nnic	chr19	+	674	2	NIC	ENSG00000186230.7	novel	677	2	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	144	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	NA	False	NA	17	True	TTTAAA	-4	NA	57435275	57438457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57435594_57438101
transcript_50817.known	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	57431331	True	NA	17	True	TTTAAA	-4	NA	57435346	57438457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57435668_57438101
transcript_50818.known	chr19	+	459	2	FSM	ENSG00000186230.7	ENST00000600697.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTTCGTCTTAAGTT	57431404	False	NA	16	True	TTTAAA	-3	NA	57435419	57438456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57435524_57438101
transcript_50819.known	chr19	+	1743	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACATTGTAAATTACT	57361392	True	NA	20	True	AATAAA	-32	NA	57363566	57365309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57363600_57365300
transcript_50821.known	chr19	+	2319	4	FSM	ENSG00000105136.22	ENST00000426954.6	2319	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	17.7451088722749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATTTCCAGAGACTGA	57487698	False	NA	24	True	AATAAA	-24	NA	57487710	57494672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57491467_57491598_57492112_57492212_57492855
transcript_50822.nnic	chr19	+	788	4	NNC	ENSG00000105136.22	novel	2323	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	20.5101600838869	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTTATGACCATTTCCA	57486829	True	NA	16	True	AATAAA	-16	NA	57487721	57494664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_57487984_57491467_57491598_57492112_57492212_57494367
transcript_50823.known	chr19	+	1857	4	FSM	ENSG00000105136.22	ENST00000442920.6	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	13.7679176187089	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTGGACAATGTAGT	57486825	True	NA	NA	False	NA	NA	NA	57487717	57494220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57491470_57491598_57492112_57492212_57492855
transcript_50824.nnic	chr19	+	766	4	NNC	ENSG00000105136.22	novel	3742	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	21.7460085737335	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTTATGACCATTTCCA	57486848	True	NA	16	True	AATAAA	-16	NA	57487740	57494664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_57487984_57491470_57491598_57492112_57492212_57494367
transcript_50825.known	chr19	+	2277	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	15.5205956357638	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACTGGAGGCAGGAT	57499283	True	NA	NA	False	NA	NA	NA	57499937	57508229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
transcript_50826.known	chr19	+	2186	3	FSM	ENSG00000105136.22	ENST00000415379.6	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	25	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGACTGAATTGTGTT	57486857	True	NA	32	True	AATAAA	-32	NA	57487749	57494680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57491470_57491598_57492855
transcript_50828.known	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.1477552619551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-57558531	True	NA	1	True	ATTAAA	-21	NA	57559863	57541835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_50829.nnic	chr19	-	2000	5	NNC	ENSG00000251369.9	novel	3376	5	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	29.0645832586672	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGACTTGTTAGGAT	-57558532	True	NA	-1	True	ATTAAA	-19	NA	57559864	57541837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_57543244_57547831_57547994_57552626_57552723_57556230_57556358_57559655
transcript_5083.known	chr1	-	961	1	FSM	ENSG00000261737.1	ENST00000565575.1	961	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTCTATTTTAGATC	-86704449	True	NA	0	True	AATAAA	-16	NA	86704462	86703501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86703500_86704500
transcript_50832.known	chr19	+	4090	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	1.88561808316413	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	57526563	True	NA	2	True	AATGAA	-17	NA	57527355	57540876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
transcript_50839.known	chr19	+	4291	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	37.6061460697879	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	57582447	True	NA	18	True	AATAAA	-18	NA	57584144	57593890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
transcript_5084.known	chr1	+	6371	9	FSM	ENSG00000097033.14	ENST00000370558.8	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	31.5453542538359	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGCTAAATCTCGTA	86702164	True	NA	9	True	AATAAA	-16	NA	86704575	86748184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_50840.known	chr19	+	720	4	FSM	ENSG00000171649.12	ENST00000600053.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	65.4879123706556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACCATCACCAGCACCA	57583374	True	NA	NA	False	NA	NA	NA	57583609	57590198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57583976_57584951_57584991_57588538_57588666_57590010
transcript_50844.known	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	57584247	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57584613_57588538_57588666_57590010
transcript_50846.known	chr19	+	4845	4	FSM	ENSG00000183647.11	ENST00000597700.6	4845	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	57599021	True	NA	9	True	AATAAA	-21	NA	57599884	57610098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57605685
transcript_50849.known	chr19	+	634	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	9.62635271879577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599039	True	NA	NA	False	AATAAA	-29	NA	57599902	57612722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
transcript_50850.known	chr19	+	4793	3	FSM	ENSG00000183647.11	ENST00000332854.11	4793	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	57599021	True	NA	9	True	AATAAA	-21	NA	57599884	57610098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57600135_57604276_57604407_57605685
transcript_50852.known	chr19	+	590	4	FSM	ENSG00000213762.12	ENST00000600883.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	112.197246945824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCAGGGTACACACCAT	57606414	True	NA	NA	False	NA	NA	NA	57614255	57620318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57614504_57618791_57618878_57619411_57619509_57620159
transcript_50853.known	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	16	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	57606400	True	NA	18	True	AATAAA	-21	NA	57614241	57624724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57614504_57619411_57619509_57620159
transcript_50854.known	chr19	+	559	2	FSM	ENSG00000213762.12	ENST00000597975.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGGCCTCAATTGTG	57606391	True	NA	NA	False	NA	NA	NA	57614232	57620447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57614504_57620159
transcript_50857.known	chr19	+	2759	6	FSM	ENSG00000121417.14	ENST00000540556.5	2759	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	16.3266653055668	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631837	True	NA	15	True	AATAAA	-16	NA	57633180	57642764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_50858.known	chr19	+	2641	5	FSM	ENSG00000121417.14	ENST00000535785.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.4773827331754	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631872	True	NA	15	True	AATAAA	-16	NA	57633215	57642764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57633712_57633906_57634022_57634062_57634628_57634756_57640703
transcript_50859.known	chr19	+	2577	5	FSM	ENSG00000121417.14	ENST00000299871.9	2577	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.4212513901843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATAAAAGCATTAT	57631872	True	NA	-12	True	NA	NA	NA	57633215	57642737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_50860.nic	chr19	+	2619	5	NIC	ENSG00000121417.14	novel	2759	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	19.382659776202	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCTTGGCATTTGA	57631824	True	NA	18	True	AATAAA	-19	NA	57633167	57642767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57640703
transcript_50861.known	chr19	+	3773	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.3045763140937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	57631824	True	NA	8	True	AATAAA	-16	NA	57633167	57644041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
transcript_50863.known	chr19	+	2472	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	57631824	True	NA	30	True	AATAAA	-31	NA	57633167	57642779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57634628_57634756_57640703
transcript_50865.known	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	14.7478812037526	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-57707326	True	NA	0	True	NA	NA	NA	57709194	57697366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
transcript_50870.known	chr19	-	2431	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	3.68178700572909	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-57726638	True	NA	-2	True	AATAAA	-22	NA	57727624	57719750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
transcript_50871.nic	chr19	+	1702	3	NIC	ENSG00000152443.13	novel	5262	3	NA	NA	-10	11	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCATATAGATAAGGTT	57743860	True	NA	28	True	AATAAA	-29	NA	57746804	57758159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57747092_57750784_57750912_57756871
transcript_50872.known	chr19	+	4560	3	FSM	ENSG00000204519.11	ENST00000282296.10	4560	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	9	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCTTTATATGGATA	57679264	True	NA	22	True	AATAAA	-20	NA	57681976	57690648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57682245_57685261_57685386_57686480
transcript_50873.known	chr19	+	5262	3	FSM	ENSG00000152443.13	ENST00000317178.10	5262	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGCAATTCTTCATA	57743870	True	NA	17	True	AATAAA	-18	NA	57746814	57758148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57747092_57750784_57750912_57753290
transcript_5089.known	chr1	-	831	5	FSM	ENSG00000183291.18	ENST00000469566.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	591.617010827106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGATTTCTAAATTAGA	-86914404	False	NA	NA	False	NA	NA	NA	86914424	86863166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914314
transcript_50890.known	chr19	-	461	4	FSM	ENSG00000204514.11	ENST00000600634.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	76.3675323681471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCAGTGTGTGTGGTC	-57883998	False	4819	-2	True	AATAAA	-30	NA	57888817	57864758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57864920_57868457_57868580_57876915_57877043_57888766
transcript_50892.known	chr19	+	2196	3	FSM	ENSG00000083828.16	ENST00000396154.7	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	4.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTCTCATACTTTAC	57768275	True	NA	47	True	NA	NA	NA	57769675	57780616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57769879_57776542_57776670_57778750
transcript_50894.nnic	chr19	+	615	3	Fusion	ENSG00000269343.9_ENSG00000198466.12	novel	1670	4	NA	NA	-10	-9	multi-exon	FALSE	canonical	3	10	junction_2	13	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	57811033	True	NA	9	True	CATAAA	-14	NA	57819710	57854099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_57819946_57820493_57820550_57853775
transcript_50895.known	chr19	+	5794	3	FSM	ENSG00000269343.9	ENST00000594901.2	5794	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	57828253	True	NA	17	True	AATAAA	-17	NA	57830298	57846238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57830565_57839022_57839150_57840837
transcript_50898.known	chr19	-	2352	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-57813196	True	NA	-4	True	AATAAA	-17	NA	57814913	57807081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57809104_57813293_57813421_57814710
transcript_50903.known	chr19	-	528	3	FSM	ENSG00000204514.11	ENST00000596604.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	44	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884101	False	NA	-2	True	AATAAA	-22	NA	57888920	57850314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57850562_57876915_57877043_57888766
transcript_50904.nnic	chr19	-	619	3	NIC	ENSG00000204514.11	novel	648	4	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884232	True	NA	-2	True	AATAAA	-22	NA	57889051	57850314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_57850562_57885882_57885970_57888766
transcript_50907.known	chr19	-	1975	3	FSM	ENSG00000173480.11	ENST00000595559.1	1975	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	19.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCTTATGAGTGCTG	-57914254	True	NA	NA	False	ATTAAA	-22	NA	57916591	57908479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57910115_57912059_57912187_57916378
transcript_50908.known	chr19	+	1977	2	FSM	ENSG00000083828.16	ENST00000396150.4	1977	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGTGTTATAATAAAGG	57768295	True	NA	-25	True	NA	NA	NA	57769695	57780544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57769879_57778750
transcript_50909.known	chr19	+	545	2	FSM	ENSG00000198466.12	ENST00000484707.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGAGTTTCATTCA	57848287	True	NA	18	True	CATAAA	-23	NA	57849859	57854108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57850072_57853775
transcript_50910.nnic	chr19	-	546	2	NIC	ENSG00000204514.11	novel	648	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGACGGCTCTGCGTG	-57884251	True	NA	-7	True	AATAAA	-17	NA	57889070	57850319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_57850562_57888766
transcript_50911.known	chr19	-	909	2	FSM	ENSG00000204514.11	ENST00000595295.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGGGGCTTCTT	-57884002	False	4819	NA	False	NA	NA	NA	57888821	57858129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57858984_57888766
transcript_50913.known	chr19	-	771	2	FSM	ENSG00000204514.11	ENST00000597807.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCATGGGCTGTCA	-57884150	True	NA	NA	False	NA	NA	NA	57888969	57876474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57877043_57888766
transcript_50914.known	chr19	-	757	5	FSM	ENSG00000204514.11	ENST00000597348.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	72.6476943887416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-57884218	True	NA	-1	True	AATAAA	-31	NA	57889037	57864757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57864924_57868457_57868580_57875155_57875227_57876915_57877043_57888766
transcript_50918.known	chr19	-	3547	7	FSM	ENSG00000196724.13	ENST00000425570.7	3547	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	20.1301321958457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-57933310	True	NA	-10	True	AATAAA	-14	NA	57935387	57922265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930558_57932429_57932647_57933816_57933903_57935160
transcript_50927.known	chr19	-	597	6	FSM	ENSG00000196724.13	ENST00000600989.5	597	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	14.0228385143665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCTTGTGAATTACA	-57935165	False	NA	NA	False	NA	NA	NA	57935176	57922430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930555_57933816_57933903_57935160
transcript_50930.nic	chr19	-	992	6	NIC	ENSG00000196724.13	novel	3547	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	14.0228385143665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-57933326	True	NA	-10	True	AATAAA	-14	NA	57935403	57922265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930558_57933816_57933903_57935160
transcript_50931.known	chr19	-	3726	6	FSM	ENSG00000196724.13	ENST00000396147.6	3726	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	14.6751490622753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTTTCTTTTTTGA	-57933325	True	NA	0	True	AATAAA	-18	NA	57935402	57921881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930555_57933816_57933903_57935160
transcript_50937.known	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-57944598	True	NA	-15	True	AATAAA	-21	NA	57947706	57940832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57942648_57943933_57944061_57947441
transcript_50938.known	chr19	-	1958	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGGTAACACACATAG	-57944567	True	NA	-106	True	AAAACA	-23	NA	57947675	57940923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57942648_57947441
transcript_50939.known	chr19	-	4225	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	26.0496321151246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	NA	False	NA	-23	True	AATAAA	-25	NA	58003349	57977075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
transcript_50940.known	chr19	-	4087	7	FSM	ENSG00000166704.13	ENST00000551380.7	4080	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	57	junction_1	13.0437298687488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	-58002027	True	NA	-23	True	AATAAA	-25	NA	58002827	57977075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002395
transcript_50942.known	chr19	+	1919	4	FSM	ENSG00000176593.8	ENST00000313957.8	1919	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	58001935	True	NA	NA	False	ATTAAA	-10	NA	58002871	58007206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58003047_58003210_58003337_58004382_58004701_58005906
transcript_50945.known	chr19	+	813	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCATCTGTCCTGTGG	58033925	True	NA	3	True	ATTAAA	-18	NA	58034105	58038442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58034162_58035969_58036012_58037727
transcript_50947.known	chr19	-	761	3	FSM	ENSG00000121413.13	ENST00000600845.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCAGCTAGCCTG	-58095444	True	NA	NA	False	NA	NA	NA	58098203	58088687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58088838_58089864_58090387_58098114
transcript_50949.known	chr19	+	3334	5	FSM	ENSG00000176293.20	ENST00000313434.10	3334	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	10.1980390271856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGCTGTTTTTGGT	58058533	True	NA	NA	False	NA	NA	NA	58059281	58069755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58066740
transcript_50950.known	chr19	-	1768	2	FSM	ENSG00000121413.13	ENST00000595944.1	1768	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACAGCACATGTGTTTA	-58118373	True	NA	NA	False	TATAAA	-18	NA	58118427	58107615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58109304_58118347
transcript_50951.known	chr19	-	2779	7	FSM	ENSG00000121413.13	ENST00000240727.10	2779	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	44.0167266186642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTTTTCATTGATTG	-58095451	True	NA	-21	True	ACTAAA	-18	NA	58098210	58083838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58097929
transcript_50954.known	chr19	+	2808	8	FSM	ENSG00000171606.18	ENST00000617501.5	2808	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	23.6987901180888	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	58182477	True	NA	33	True	AATAAA	-22	NA	58183060	58213562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_50956.nnic	chr19	+	608	5	NNC	ENSG00000171606.18	novel	1646	6	NA	NA	-1	-3376	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	47.5677148915102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTCAGTCCTGTAAT	58182815	False	NA	9	True	ATTAAA	-22	NA	58183398	58199092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58198829
transcript_50969.nnic	chr19	+	775	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-33	-2648	at_least_one_novel_splicesite	TRUE	canonical	3	46	junction_6	62.030682372158	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	58224905	True	NA	12	True	AATAAA	-19	NA	58228880	58274599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58274365
transcript_5097.known	chr1	-	1542	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_4	47.4150556258242	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-86901827	True	NA	-5	True	ATTAAA	-21	NA	86914126	86862444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
transcript_50970.known	chr19	+	588	7	FSM	ENSG00000198131.15	ENST00000594384.5	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	60.9562684772179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTAGGAAAAGTGCAAG	58224938	True	NA	4	True	NA	NA	NA	58228913	58260965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_5098.known	chr1	-	1220	4	FSM	ENSG00000183291.18	ENST00000370554.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	614.380085036038	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAATTTGGAATTC	-86901835	True	NA	-8	True	AATAAA	-13	NA	86914134	86862724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86880661_86880726_86903280_86903449_86914027
transcript_50981.known	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	73.7829022651364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224999	True	NA	NA	False	AATAAA	-18	NA	58228974	58263644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_5099.known	chr1	+	6759	7	FSM	ENSG00000153936.18	ENST00000370550.10	6759	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	19.3340517107914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATGACTGTACTTT	86914603	True	NA	8	True	TATAAA	-3	NA	86914634	87109982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104469
transcript_50993.known	chr19	+	9110	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_3	8.05536398239638	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	58275330	True	NA	14	True	AATAAA	-14	NA	58278954	58302791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
transcript_50995.nnic	chr19	+	928	4	NNC	ENSG00000142396.10	novel	1469	4	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	142.18298069741	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTCTGTCTCATTT	58299804	True	NA	15	True	NA	NA	NA	58305341	58315204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_58305446_58306087_58306217_58312165_58312404_58314747
transcript_50997.nnic	chr19	+	1377	4	NNC	ENSG00000142396.10	novel	1469	4	NA	NA	23	-10	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	142.18298069741	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGGTGTTTGTGTGGA	58299804	True	NA	24	True	TATAAA	-22	NA	58305341	58315653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_58305446_58306087_58306217_58312165_58312404_58314747
transcript_50998.known	chr19	+	1469	4	FSM	ENSG00000142396.10	ENST00000413518.5	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	40.4749579644281	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGATGTATATTTT	NA	False	NA	34	True	TATAAA	-32	NA	58305318	58315663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58305446_58306087_58306217_58312165_58312463_58314747
transcript_51.known	ERCC-00142	+	478	1	FSM	ERCC-00142A	DQ883646	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00142_+_0_500
transcript_510.nnic	chr1	+	1493	8	NNC	ENSG00000157916.20	novel	1404	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	426.771745138991	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGATTATTTTGAC	2381571	True	NA	9	True	TATAAA	-18	NA	2391838	2403751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_2391959_2393207_2393356_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_51001.known	chr19	+	922	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	132.969503604732	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	58299836	True	NA	13	True	NA	NA	NA	58305373	58315202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
transcript_51016.nic	chr19	-	766	3	ISM	ENSG00000283103.4	ENST00000651375.3	2818	5	-4	4356	0	0	5prime_fragment	FALSE	canonical	3	298	junction_1	12.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	-58327154	True	NA	-29	True	AATAAA	-20	NA	58327252	58314787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_58315037_58325274_58325362_58326822
transcript_51017.known	chr19	-	2708	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	18	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-58278782	False	NA	-4	True	AATACA	-23	NA	58278808	58257269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58259692_58278522
transcript_51018.nnic	chr19	-	377	2	FSM	ENSG00000268516.3	ENST00000693494.1	439	2	62	0	62	0	multi-exon	FALSE	canonical	3	25	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTTGGAAAATGCT	-58277921	True	NA	0	True	AATATA	-24	NA	58278746	58274700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58274854_58278522
transcript_51019.known	chr19	-	683	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTTGGTGGTTCACC	-58327150	True	NA	-21	True	AATAAA	-28	NA	58327248	58314779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58315037_58326822
transcript_51020.known	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	58326467	True	NA	4	True	AATAAA	-20	NA	58326993	58342332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58327115_58334751_58335206_58338253
transcript_51024.known	chr19	+	977	3	FSM	ENSG00000268895.6	ENST00000593960.5	977	3	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTTGAGGCGACTGC	58347380	True	NA	NA	False	NA	NA	NA	58347752	58354502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58347845_58353378_58353475_58353713
transcript_51025.known	chr19	+	1736	3	FSM	ENSG00000269054.3	ENST00000599889.3	1835	3	14	85	14	-58	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTATGCCTGCAACCG	58362389	True	NA	NA	False	NA	NA	NA	58362582	58367535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58362753_58364535_58364600_58366033
transcript_51026.known	chr19	+	1056	2	FSM	ENSG00000268895.6	ENST00000600686.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGGGGGAGAATGCAT	58347416	True	NA	NA	False	NA	NA	NA	58347788	58354713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58347845_58353713
transcript_51027.known	chr19	-	475	2	FSM	ENSG00000121410.12	ENST00000598345.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTCTTTGGACTCC	-58346153	True	NA	-10	True	AATAAA	-19	NA	58347657	58346859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58347030_58347352
transcript_51028.known	chr19	+	1762	3	FSM	ENSG00000269054.3	ENST00000663335.1	1762	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGGGGAAGCCTGTG	58362414	True	NA	NA	False	AATAAA	-4	NA	58362607	58367593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58362753_58364535_58364593_58366033
transcript_51030.known	chr19	+	800	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3857.0755185186	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	58285770	True	NA	41	True	AATAAA	-27	NA	58387268	58394800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_51032.known	chr19	+	741	6	FSM	ENSG00000083845.9	ENST00000196551.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_5	450.338539323474	4527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285770	True	NA	45	True	AATAAA	-31	NA	58387268	58394804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_51038.known	chr19	+	1203	7	FSM	ENSG00000083845.9	ENST00000601521.5	1203	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3131.50941595618	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	58386384	False	NA	47	True	AATAAA	-33	NA	58386399	58394806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58386623_58387031_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_5104.known	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	10.9658560997307	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	86914616	False	NA	14	True	AATAAA	-33	NA	86914647	87098445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
transcript_51040.known	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3588.99856331819	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285765	True	NA	45	True	AATAAA	-31	NA	58387263	58394804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
transcript_51043.known	chr19	+	523	2	FSM	ENSG00000083845.9	ENST00000599909.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	8971	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGGCCTTGGCCACTT	58285776	True	NA	NA	False	NA	NA	NA	58387274	58388594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136
transcript_51044.known	chr19	+	1520	5	FSM	ENSG00000083845.9	ENST00000596046.1	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_4	354.831914432735	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	58285790	True	NA	47	True	AATAAA	-33	NA	58387288	58394806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_51045.known	chr19	+	459	1	FSM	ENSG00000268307.1	ENST00000596379.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAAGTGTTTACTGAGC	58400190	False	NA	17	True	AATAAA	-17	NA	58400220	58400679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58400200_58400700
transcript_51047.known	chr19	+	2187	4	FSM	ENSG00000171574.18	ENST00000593920.5	2187	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.41629792788369	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	58408305	True	NA	10	True	AATAAA	-10	NA	58408687	58418310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58409166_58410005_58410092_58415523_58415647_58416810
transcript_5105.known	chr1	+	4993	5	FSM	ENSG00000143013.13	ENST00000370544.10	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	24.9837447153144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTGTTATAAGTTCT	87327897	True	NA	9	True	AATAAA	-19	NA	87328879	87348923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_87329245_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_51051.known	chr19	+	2050	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.07602762639048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	58476325	True	NA	NA	False	CATAAA	-17	NA	58476351	58481230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_51055.known	chr19	+	2154	6	FSM	ENSG00000083838.17	ENST00000391694.4	2154	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.82269800004511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	58476408	False	NA	NA	False	CATAAA	-17	NA	58476449	58481230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58480020_58480175
transcript_51058.known	chr19	-	643	3	FSM	ENSG00000083807.10	ENST00000594786.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	1	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-58497459	True	NA	-3	True	AATAAA	-20	NA	58499275	58498332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58498692_58498784_58498916_58499122
transcript_51059.known	chr19	-	474	2	FSM	ENSG00000083807.10	ENST00000599700.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCTGTATGTCTGCGT	-58497425	True	NA	-7	True	AATAAA	-16	NA	58499241	58498336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58498692_58499122
transcript_51061.known	chr19	-	2129	3	FSM	ENSG00000119574.13	ENST00000594051.6	2129	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	20	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	-58518726	True	NA	-6	True	AATAAA	-32	NA	58519810	58513529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58514311_58516394_58517674_58519741
transcript_51063.nic	chr19	+	2515	17	NIC	ENSG00000130726.12	novel	3364	17	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	602	junction_1	673.62247169687	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	58544016	False	NA	34	True	AATAAA	-14	NA	58544026	58550715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58544212_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_5107.known	chr1	+	1260	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	88.6746158717364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATTTGGAAAAAA	87331277	True	NA	NA	False	AAAAAG	-11	NA	87331667	87345408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_51073.known	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_5	258.970577479373	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542598	True	NA	-11	True	AATAAA	-16	NA	58554973	58551565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
transcript_51074.known	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	250.73380306612	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542730	True	NA	-11	True	AATAAA	-16	NA	58555105	58551565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
transcript_51081.known	chr19	-	734	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	746.62271075974	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGGGGTGGCTACATCG	-58554456	True	NA	NA	False	NA	NA	NA	58558954	58556140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
transcript_51083.known	chr19	+	944	3	FSM	ENSG00000286104.1	ENST00000473164.1	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTTGACTAGAACTCAA	58573308	True	NA	NA	False	NA	NA	NA	58575455	58599575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58575589_58586154_58586357_58598966
transcript_51086.known	chr19	-	1307	3	FSM	ENSG00000269600.2	ENST00000596029.2	1307	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTCCAATGGCAAATTG	NA	False	NA	NA	False	NA	NA	NA	58599303	58593133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58594126_58597705_58597817_58599099
transcript_51087.nnic	chr19	+	728	2	NIC	ENSG00000286104.1	novel	944	3	NA	NA	-60	-85	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTTTCATAAGAATG	58573237	True	NA	NA	False	CATAAA	-5	NA	58575384	58599490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58575589_58598966
transcript_51089.nnic	chr19	+	982	2	NIC	ENSG00000213753.11	novel	8336	3	NA	NA	-53	309	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAGGAGTTTGGTGA	58573237	True	NA	NA	False	AAGAAA	-18	NA	58575384	58599744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58575589_58598966
transcript_51090.known	chr19	+	3282	2	FSM	ENSG00000213753.11	ENST00000493504.1	3282	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTCTTTGTTGTGTT	58573312	True	NA	12	True	AATAAA	-23	NA	58575459	58584397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58575589_58581244
transcript_51091.known	chr2	-	471	2	FSM	ENSG00000184731.6	ENST00000461026.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATGTGCCCCTTTTGA	-46691	True	NA	-25	True	AATAAA	-18	NA	46870	41220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_41628_46806
transcript_51098.known	chr2	-	1744	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.6822018558765	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	-264013	False	1235	-8	True	AATAAA	-25	NA	264032	218143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_5110.nic	chr1	+	2095	3	ISM	ENSG00000065243.20	ENST00000316005.11	2632	11	19	44641	19	-43267	5prime_fragment	FALSE	canonical	3	154	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGACATTAGGGAAG	88679497	True	NA	NA	False	AATATA	-34	NA	88684240	88761627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_88684629_88740987_88741289_88760221
transcript_51106.known	chr2	-	1999	10	FSM	ENSG00000035115.22	ENST00000463865.5	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	76.9845262630785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	-264373	False	NA	-13	True	AATAAA	-20	NA	264392	218148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
transcript_51110.known	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	58.102146044703	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	-264013	False	1235	0	True	AATAAA	-33	NA	264032	218135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_5112.known	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	12.2576506721313	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-88890585	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
transcript_51127.known	chr2	+	577	7	FSM	ENSG00000143727.16	ENST00000453390.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	1063.42826117546	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACGTTCCAGGGCC	245930	True	NA	NA	False	NA	NA	NA	264964	277375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272066_272191_272306_275139_275202_276979_277086_277226
transcript_5113.nic	chr1	-	1534	7	NIC	ENSG00000137947.12	novel	1599	7	NA	NA	19	292	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	48.9069411115528	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTTATATGTTACAT	-88891906	False	NA	-1	True	AATAAA	-19	NA	88891925	88852931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891606
transcript_51130.known	chr2	+	546	7	FSM	ENSG00000143727.16	ENST00000442386.5	546	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1199.09749626774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCAGGTGCTGCAGAG	245865	True	NA	NA	False	NA	NA	NA	264899	277261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_51136.known	chr2	+	1474	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	0	0	0	0	multi-exon	FALSE	canonical	3	2047	junction_3	312.497423989383	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245912	True	NA	94	True	AATAAA	-36	NA	264946	278283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_51139.known	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	1042.8108936907	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245834	True	NA	94	True	AATAAA	-36	NA	264868	278283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
transcript_51145.known	chr2	+	573	6	FSM	ENSG00000143727.16	ENST00000484464.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	1037.60531995552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTGTAATCACGTTCC	246170	False	NA	NA	False	NA	NA	NA	265204	277369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265279_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_51149.known	chr2	-	541	6	FSM	ENSG00000035115.22	ENST00000488979.6	541	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	64.9350444675292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAACTAATAGAAAGT	-263333	True	NA	NA	False	NA	NA	NA	264568	233118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233230_234159_234273_247537_247603_249730_249845_253004_253116_264541
transcript_51152.known	chr2	+	689	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	1182.7350717722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	245858	True	NA	14	True	AATAAA	-16	NA	264892	277506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
transcript_51162.known	chr2	-	2572	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	124.764418004494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	-673805	True	NA	NA	False	ATTAAA	-20	NA	677406	667972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
transcript_51163.nic	chr2	-	1446	6	NIC	ENSG00000151353.15	novel	2572	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	126.98661346772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCACCATGCCCTCC	-673202	False	3601	-22	True	AATAAA	-14	NA	676803	669210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_676573
transcript_51168.known	chr2	-	654	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	117.172949096624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCAGCCAGCACTG	-673103	False	NA	NA	False	TTTAAA	-31	NA	676704	669422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
transcript_51169.known	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	32.4913450014	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	-673805	True	NA	2	True	AATAAA	-32	NA	677406	663876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
transcript_51174.nic	chr2	-	1573	5	NIC	ENSG00000151353.15	novel	654	5	NA	NA	-16	0	intron_retention	FALSE	canonical	3	19	junction_4	114.156416814825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCACCATGCCCTCC	-673202	False	3601	-22	True	AATAAA	-14	NA	676803	669210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_669676_669756_669851_672807_672863_675509_676239_676573
transcript_51175.nic	chr2	-	1520	5	NIC	ENSG00000151353.15	novel	2572	6	NA	NA	-59	0	intron_retention	FALSE	canonical	3	28	junction_4	110.279191146834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCACCATGCCCTCC	NA	False	NA	-22	True	AATAAA	-14	NA	677465	669210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_669676_669756_669851_672807_672863_675509_676239_677288
transcript_51177.nnic	chr2	+	806	3	NNC	ENSG00000223751.2	novel	2012	2	NA	NA	0	5121	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTGAAAAAAAATAAATGGG	740785	False	NA	NA	False	AATAAA	-28	NA	740884	754544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_741131_749733_749857_754107
transcript_51178.nnic	chr2	-	858	3	FSM	ENSG00000235688.3	ENST00000456949.3	869	3	11	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	29.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	-949157	True	NA	-6	True	AATAAA	-29	NA	950754	949626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_949802_949910_950387_950547
transcript_51179.known	chr2	-	1795	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	75.680615454392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTCTTTGTCCAT	-3375894	True	NA	-3	True	NA	NA	NA	3377830	3188924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
transcript_51180.known	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	12.5343278639104	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375882	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_51182.nic	chr2	-	1561	8	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	63.0140897752565	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375943	True	NA	-5	True	AATAAA	-17	NA	3377879	3188969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
transcript_51184.known	chr2	-	847	7	FSM	ENSG00000032389.13	ENST00000455162.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.0154974544768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGCGTCTATGCCGT	-3375852	True	NA	NA	False	NA	NA	NA	3377788	3189459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3354549_3354634_3377647
transcript_51186.nic	chr2	-	1226	6	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	73.7265216865681	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375904	True	NA	-5	True	AATAAA	-17	NA	3377840	3188969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214170_3377647
transcript_51187.known	chr2	-	672	6	FSM	ENSG00000032389.13	ENST00000435721.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	71.1319899904396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGAGACGACTGTAAGG	-3375845	True	NA	NA	False	NA	NA	NA	3377781	3194082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
transcript_51190.known	chr2	-	2181	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_3	17.9876500843094	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTGAATTTTGACAA	-3511600	True	NA	NA	False	AATAAA	-16	NA	3519531	3497365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
transcript_51193.known	chr2	+	974	2	FSM	ENSG00000235078.1	ENST00000450917.1	974	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAATCTGTTTAGATG	3519245	True	NA	NA	False	NA	NA	NA	3519274	3523197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3519957_3522905
transcript_51199.known	chr2	-	5289	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_6	19.1439232112534	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTCGTCTTTGTCTTCT	-3548717	True	NA	-1	True	AATAAA	-33	NA	3558333	3541429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_51210.known	chr2	+	4333	3	FSM	ENSG00000234171.4	ENST00000664922.2	4344	3	11	0	6	0	multi-exon	FALSE	canonical	3	74	junction_1	24	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	3558173	True	NA	NA	False	NA	NA	NA	3558473	3564842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3558999_3559447_3559730_3561316
transcript_51212.nnic	chr2	+	609	3	NNC	ENSG00000234171.4	novel	4344	3	NA	NA	200	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	3557219	True	NA	NA	False	AATAAA	-36	NA	3558667	3561731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_3558829_3558965_3558999_3561316
transcript_51213.known	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	51	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	3558553	False	NA	NA	False	AATAAA	-36	NA	3558577	3561731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3558999_3561316
transcript_51214.known	chr2	+	1115	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	160	0	160	0	multi-exon	FALSE	canonical	3	46	junction_1	38	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	3558603	False	NA	NA	False	AATAAA	-39	NA	3558627	3561734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3558999_3559403_3559730_3561316
transcript_51215.known	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	4560.37805450382	2857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398622	True	NA	3	True	AATAAA	-19	NA	3575315	3580919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51216.known	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	3	561	junction_1	4366.22497766154	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	3398664	True	NA	-15	True	AATAAA	-1	NA	3575357	3580901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51217.known	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_1	2006.39458288299	35476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	3398566	True	NA	4	True	AATAAA	-20	NA	3575259	3580920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51218.known	chr2	+	557	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	4509.54013422901	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	3398627	True	NA	-38	True	NA	NA	NA	3575320	3580878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51219.known	chr2	+	1425	7	FSM	ENSG00000118004.18	ENST00000349077.9	1425	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.37436854187255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	3595081	True	NA	NA	False	AAAACA	-24	NA	3595111	3644644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_51221.known	chr2	+	1633	6	FSM	ENSG00000118004.18	ENST00000382062.6	1633	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.979795897113271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	NA	False	NA	NA	False	AAAACA	-24	NA	3594831	3644644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3640277_3640332_3643443_3643540_3643726
transcript_51222.known	chr2	+	1557	6	FSM	ENSG00000118004.18	ENST00000403096.7	1557	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.46969384566991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	3605683	False	NA	5	True	AATAAA	-20	NA	3605700	3644446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3606244_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_51223.known	chr2	+	1240	5	FSM	ENSG00000118004.18	ENST00000460971.5	1240	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	3594924	True	NA	5	True	AATAAA	-20	NA	3594954	3644446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3595169_3604314_3604471_3640277_3640332_3643443_3643540_3643726
transcript_51224.known	chr2	+	9002	1	FSM	ENSG00000176887.7	ENST00000322002.5	9002	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTTTATGTGACT	5691138	True	NA	19	True	AATAAA	-20	NA	5692383	5701385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_5692400_5701400
transcript_51225.known	chr2	+	1746	2	FSM	ENSG00000236106.3	ENST00000413960.2	1769	2	11	12	11	-12	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATGTGAGTGGCTGC	5726388	True	NA	NA	False	AATAAA	-4	NA	5726448	5730342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_5726580_5728727
transcript_51226.known	chr2	-	469	2	FSM	ENSG00000230515.1	ENST00000414654.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTGAAGTTAATTCAC	NA	False	NA	NA	False	NA	NA	NA	7672246	7671603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_7671908_7672081
transcript_51243.nnic	chr2	+	816	4	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	167.853772340358	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871489	True	NA	25	True	AATAAA	-17	NA	7876629	7891784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7878460_7878482_7883431_7883560_7891272
transcript_51245.nnic	chr2	+	1300	4	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	167.853772340358	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871489	True	NA	14	True	AATAAA	-15	NA	7876629	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7878460_7878482_7883431_7883560_7891272
transcript_5125.known	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	20.0499376557634	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-88985222	True	NA	0	True	AATAAA	-23	NA	88992776	88935772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
transcript_51254.nnic	chr2	+	1097	4	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	168.729237405838	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871499	True	NA	25	True	AATAAA	-17	NA	7876639	7891784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7878169_7878482_7883431_7883560_7891272
transcript_51260.nnic	chr2	+	1391	4	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	17	junction_1	196.933716993533	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871529	True	NA	14	True	AATAAA	-15	NA	7876669	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7881373_7881526_7883431_7883560_7891272
transcript_51265.nnic	chr2	+	1238	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	215	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7874246	False	NA	14	True	AATAAA	-15	NA	7874259	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7874374_7883431_7883560_7891272
transcript_51268.nnic	chr2	+	1296	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	221.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7874495	False	NA	14	True	AATAAA	-15	NA	7874505	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7874678_7883431_7883560_7891272
transcript_51271.nnic	chr2	+	1866	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_1	197	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7875254	False	NA	14	True	AATAAA	-15	NA	7875264	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876007_7883431_7883560_7891272
transcript_51280.nnic	chr2	+	969	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	105	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871499	True	NA	25	True	AATAAA	-17	NA	7876639	7891784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7878169_7878482_7891272
transcript_51282.nnic	chr2	+	1453	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	105	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871499	True	NA	14	True	AATAAA	-15	NA	7876639	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7878169_7878482_7891272
transcript_51285.nnic	chr2	+	1262	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	33	junction_1	205	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871506	True	NA	14	True	AATAAA	-15	NA	7876646	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876785_7883431_7883560_7891272
transcript_51292.nnic	chr2	+	2452	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	290	junction_1	76.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871529	True	NA	25	True	AATAAA	-17	NA	7876669	7891784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7883431_7883560_7891272
transcript_51294.nnic	chr2	+	2305	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	290	junction_1	76.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7877289	False	NA	14	True	AATAAA	-15	NA	7877300	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7883431_7883560_7891272
transcript_51299.nnic	chr2	+	1030	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7875220	True	NA	25	True	AATAAA	-17	NA	7875488	7891784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876007_7891272
transcript_51303.nnic	chr2	+	2354	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871499	True	NA	25	True	AATAAA	-17	NA	7876639	7891784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7891272
transcript_51305.nnic	chr2	+	2838	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871499	True	NA	14	True	AATAAA	-15	NA	7876639	7892268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7891272
transcript_51307.known	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	8	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	8680704	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_8682514_8682842_8682907_8683684
transcript_51312.nic	chr2	-	1722	13	FSM	ENSG00000134313.17	ENST00000693249.1	1646	13	-22	-54	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16.3526671287048	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGTGTTATGTGGTTT	-8834454	True	NA	NA	False	AATAAA	-24	NA	8837630	8790965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_51313.nnic	chr2	-	1722	8	NNC	ENSG00000119185.13	novel	4153	7	NA	NA	-54	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.513927537687	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	NA	False	NA	-18	True	AATAAA	-2	NA	9423582	9405683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_9406011_9406286_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51318.known	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	143.157968977045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9423187	False	3074	NA	False	TATAAA	-23	NA	9423229	9403474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
transcript_51320.nic	chr2	-	1086	8	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	139.782338086098	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-9420461	True	NA	NA	False	ATTAAA	-22	NA	9423535	9406659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_5133.known	chr1	-	4799	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	-88985218	True	NA	-8	True	ATTAAA	-16	NA	88992772	88979455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88984067_88992584
transcript_51332.nic	chr2	-	1569	7	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	114.118968138031	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-9423193	False	NA	NA	False	ATTAAA	-22	NA	9423235	9406659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_51334.known	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	41.1933112154011	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9420454	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51336.known	chr2	-	874	7	FSM	ENSG00000119185.13	ENST00000488451.5	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	154.665948274194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGTTAACTCTCAAT	-9420406	True	NA	NA	False	ATTAAA	-15	NA	9423480	9406666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_51348.nic	chr2	-	912	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	124.364946829885	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	9423579	9406659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
transcript_51349.known	chr2	-	861	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	117.505063720675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-9420426	True	NA	NA	False	ATTAAA	-22	NA	9423500	9406659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
transcript_51351.known	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	103.148436730762	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-9420432	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51352.known	chr2	-	1043	6	FSM	ENSG00000119185.13	ENST00000456913.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	43.1925919574179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGGTCGGCTTGCT	-9420356	True	NA	NA	False	NA	NA	NA	9423430	9407029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51357.known	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	121.826464694663	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	-9420388	True	NA	NA	False	NA	NA	NA	9423462	9406348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
transcript_51362.known	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	146.679544889152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	-9420370	True	NA	NA	False	ATTAAA	-34	NA	9423444	9406647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
transcript_51365.known	chr2	+	2259	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	0	0	0	0	multi-exon	TRUE	canonical	3	819	junction_4	78.9118907718622	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	9413670	True	NA	22	True	AATAAA	-23	NA	9423653	9473101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
transcript_51376.known	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	13.3592341023903	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	-9552378	True	NA	-32	True	AATAAA	-17	NA	9555830	9488485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_5138.known	chr1	-	1815	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	57.794780788498	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-88985075	True	NA	-6	True	AATAAA	-17	NA	88992629	88935778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
transcript_51381.known	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	49.4489635887346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	9473359	True	NA	-8	True	AATAAA	-2	NA	9473817	9488444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51383.known	chr2	+	2176	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	18.8997354478839	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473120	True	NA	NA	False	NA	NA	NA	9474550	9489742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51385.known	chr2	+	837	6	FSM	ENSG00000134330.19	ENST00000351760.11	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.1175594209859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	9473147	False	NA	10	True	AATAAA	-20	NA	9474577	9488462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9475986_9476040_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51388.nic	chr2	+	901	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	50.5142306681988	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	NA	False	NA	10	True	AATAAA	-20	NA	9473744	9488462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51389.nic	chr2	+	1061	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	50.5142306681988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	NA	False	NA	28	True	TATAAA	-15	NA	9473744	9488622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51390.known	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.5210239064986	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473106	True	NA	NA	False	NA	NA	NA	9474536	9489742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51392.known	chr2	+	818	5	FSM	ENSG00000134330.19	ENST00000492223.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	56.1003565051061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGAAGTTTTATACT	9473108	True	NA	5	True	AATAAA	-15	NA	9474538	9488457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51399.known	chr2	+	759	3	FSM	ENSG00000134330.19	ENST00000484826.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	9481270	False	NA	28	True	TATAAA	-15	NA	9481283	9488622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9481448_9484431_9484551_9488146
transcript_51400.known	chr2	-	2196	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	2340	junction_5	553.350015812777	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTGTGAGTGCCT	-9593653	True	NA	-17	True	AATAAA	-29	NA	9630997	9583966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
transcript_51405.known	chr2	-	2216	5	FSM	ENSG00000134308.14	ENST00000381844.8	2216	5	0	0	0	0	multi-exon	FALSE	canonical	3	3338	junction_3	242.155941492254	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTATGTGATTGTGAG	-9593272	False	NA	-22	True	AATAAA	-24	NA	9630616	9583971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158
transcript_51408.known	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_11	9.27169271030299	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	9840467	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_5141.known	chr1	-	439	2	FSM	ENSG00000231999.8	ENST00000528692.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGGGCTTTACATTG	-89632721	False	NA	NA	False	AATGAA	-23	NA	89632761	89631875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_89632210_89632656
transcript_51414.nic	chr2	+	2659	14	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-125	13695	-94	7012	5prime_fragment	FALSE	canonical	3	83	junction_11	9.53411811779273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGATCTTCATTCAAC	NA	False	NA	NA	False	AATAAA	-32	NA	9843348	9920721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597
transcript_51415.known	chr2	+	1592	14	FSM	ENSG00000115750.17	ENST00000434858.5	1592	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	27.1883633305081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATCAAGATCCAAG	9840518	True	NA	NA	False	AATACA	-10	NA	9843524	9933946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_51417.nic	chr2	+	1924	12	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-125	20707	-94	0	5prime_fragment	FALSE	canonical	3	83	junction_11	10.0823059149177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATAGCAAGTCCATTTG	NA	False	NA	9	True	AATAAA	-30	NA	9843348	9913709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158
transcript_51418.nnic	chr2	+	1194	8	NNC	ENSG00000115750.17	novel	2267	15	NA	NA	-94	11050	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	34.9179796970336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATTCAGTGGTTTTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	9843348	9879814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9879520
transcript_51420.nic	chr2	+	1446	7	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-125	57852	-94	7800	5prime_fragment	FALSE	canonical	3	84	junction_1	9.3571125650788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCTCACTTAATAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	9843348	9876564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864
transcript_51421.known	chr2	+	505	5	FSM	ENSG00000115750.17	ENST00000404869.7	505	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	39.9147529116741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACCAATCACTGGAC	9840490	True	NA	NA	False	NA	NA	NA	9843496	9852124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9851967
transcript_51422.known	chr2	+	3568	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	6.96531087285812	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTCCTGTTTTTC	9951464	True	NA	11	True	ATTAAA	-22	NA	9951692	10002277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
transcript_51423.nnic	chr2	-	1678	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2757	-6	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	-10043219	True	NA	-5	True	AATACA	-18	NA	10043420	10039097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr2_-_10040665_10043309
transcript_51424.known	chr2	-	1572	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTCTGGCTTCTTT	-10040636	False	NA	1	True	AATACA	-24	NA	10040663	10039091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10039100_10040700
transcript_51429.known	chr2	+	3258	10	FSM	ENSG00000171848.16	ENST00000304567.10	3258	10	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	40.7679370505551	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTGATTGGTAAAATT	10099533	True	NA	20	True	AATAAA	-16	NA	10122738	10131414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_51436.known	chr2	+	1996	12	FSM	ENSG00000171848.16	ENST00000641498.1	1996	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	424.289995168399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGAAGGAAAAGA	10099533	True	NA	NA	False	AAGAAA	-43	NA	10122738	10199288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10141853_10141955_10142254_10142376_10198591
transcript_51437.known	chr2	-	2476	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_7	43.4537847023556	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTATCTTCACC	-10438501	True	NA	NA	False	AATAAA	-22	NA	10448327	10439967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
transcript_51439.known	chr2	-	3498	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	29.5030083211865	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACTCCAAGAAAATTT	-10683079	True	NA	NA	False	AATAAA	-29	NA	10689975	10570753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_5144.known	chr1	+	9729	12	FSM	ENSG00000162664.17	ENST00000340281.9	9729	12	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_4	32.8074774786541	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTCCTGTCTGAAAAA	89989079	True	NA	15	True	AATAAA	-16	NA	89995109	90035533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_51443.nic	chr2	-	2551	20	NIC	ENSG00000115761.16	novel	3498	21	NA	NA	0	-887	combination_of_known_junctions	FALSE	canonical	2	3	junction_19	62.8887687104534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTACCTGGTGTC	-10683079	True	NA	-16	True	ATTAAA	-17	NA	10689975	10571654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10689795
transcript_51445.known	chr2	-	3418	20	FSM	ENSG00000115761.16	ENST00000538384.5	3418	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	64.9824608768139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTTCTTTGAGAAAGA	-10683091	True	NA	NA	False	AATAAA	-15	NA	10689987	10570767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10681970_10682070_10684566_10684613_10689795
transcript_51448.known	chr2	-	3333	20	FSM	ENSG00000115761.16	ENST00000345985.7	3333	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	64.4134412428212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTTTGAGAAAGACT	-10683076	True	NA	NA	False	AATAAA	-17	NA	10689972	10570765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_51464.known	chr2	-	2509	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	2887.87812606521	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	-10739361	True	NA	-23	True	AATAAA	-14	NA	10812839	10783392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
transcript_51466.known	chr2	-	2534	14	FSM	ENSG00000143870.13	ENST00000381611.8	2534	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2914.26696457761	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	NA	False	NA	-23	True	AATAAA	-14	NA	10832485	10783392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10819273_10819355_10832201
transcript_5147.known	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.9684372313291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	89989106	True	NA	13	True	AATAAA	-14	NA	89995136	90035531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_51471.known	chr2	-	2279	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	0	0	0	multi-exon	FALSE	canonical	3	7263	junction_3	518.508832829511	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGAGCAATTTCTCT	-10739307	True	NA	-21	True	AATAAA	-16	NA	10812785	10783390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_5151.known	chr1	+	1956	10	FSM	ENSG00000162664.17	ENST00000394583.7	1956	10	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	64.0381830542442	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCCTGGATTAGCAG	89989081	True	NA	8	True	AATAAA	-17	NA	89995111	90028226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_89995274_89998109_89998155_90005002_90005093_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_51510.known	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	33.4784341861377	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	11153216	True	NA	16	True	AATAAA	-16	NA	11155466	11178856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
transcript_51511.known	chr2	+	1784	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	60.8013157752363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTCAATCATTAATA	11153121	True	NA	30	True	AATAAA	-30	NA	11155371	11178870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
transcript_51512.known	chr2	+	696	6	FSM	ENSG00000162976.13	ENST00000402361.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	61.5031706499754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTAGGTTATGGTAGT	11153284	True	NA	NA	False	TTTAAA	-28	NA	11155534	11178024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11174967_11175010_11177736
transcript_51513.nnic	chr2	+	936	5	NIC	ENSG00000162976.13	novel	1784	6	NA	NA	4	38	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	73.08385594644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATGAATGGAGTGGCA	11153184	True	NA	NA	False	AATAAA	-19	NA	11155434	11178206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11177736
transcript_51515.known	chr2	-	1253	8	FSM	ENSG00000169016.17	ENST00000437573.5	1253	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.6593028348345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTGAGAATTTATGT	-11462842	True	NA	NA	False	AAGAAA	-42	NA	11466153	11446476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11465771
transcript_51516.known	chr2	-	3296	8	FSM	ENSG00000169016.17	ENST00000444832.5	3296	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.0691939399898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462845	True	NA	0	True	TATAAA	-25	NA	11466156	11444374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11458280_11458352_11465771
transcript_51517.known	chr2	-	3139	7	FSM	ENSG00000169016.17	ENST00000428221.5	3139	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.5279838440545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462835	True	NA	0	True	TATAAA	-25	NA	11466146	11444374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453723_11457178_11457234_11465771
transcript_51518.known	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.035244466291	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462850	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
transcript_51520.known	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	66.8538704937867	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462866	True	NA	0	True	TATAAA	-25	NA	11466177	11444374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
transcript_51522.nnic	chr2	+	1605	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	513	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	4.29793231940921	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	11480536	True	NA	4	True	AATAAA	-17	NA	11482853	11581265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_51524.known	chr2	+	5384	20	FSM	ENSG00000134324.12	ENST00000256720.6	5384	20	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7.49958447602395	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	11745799	True	NA	19	True	AATAAA	-29	NA	11746587	11827409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
transcript_51525.known	chr2	+	1170	2	FSM	ENSG00000228496.2	ENST00000435175.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCATGTGTCATTTTGT	11681210	True	NA	9	True	CATAAA	-21	NA	11681460	11683328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11681493_11682190
transcript_51526.known	chr2	+	1059	2	FSM	ENSG00000228496.2	ENST00000455754.2	1085	2	26	0	-1	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCGTCATGTGTCAT	11681209	True	NA	4	True	CATAAA	-16	NA	11681459	11683323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11681493_11682297
transcript_51527.known	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711154	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_12717011_12723259_12723553_12740325
transcript_51528.known	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	235.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	12718126	True	NA	22	True	AATAAA	-23	NA	12718237	12724825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_12718578_12723259_12723553_12724628
transcript_51529.known	chr2	+	4344	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	19.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711155	True	NA	77	True	AATAAA	-22	NA	12716935	12742734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_12718578_12723259_12723553_12740325
transcript_51533.known	chr2	+	2484	26	FSM	ENSG00000079785.16	ENST00000233084.8	2484	26	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_11	131.899391962207	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_51535.known	chr2	+	2451	26	FSM	ENSG00000079785.16	ENST00000678137.1	2451	26	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_18	287.15109890091	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623468_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_51537.known	chr2	+	2465	26	FSM	ENSG00000079785.16	ENST00000678594.1	2465	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	293.260632202824	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595508_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_51538.known	chr2	+	2423	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	297.418884833421	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_51541.known	chr2	+	2430	23	FSM	ENSG00000079785.16	ENST00000678786.1	2430	23	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_20	303.71802113743	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15591721	False	NA	6	True	AATAAA	-14	NA	15591732	15631101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15629601_15629698_15629989_15630111_15630775
transcript_51542.nic	chr2	+	302	5	ISM	ENSG00000079785.16	ENST00000459706.2	3354	18	-8	25517	8	-25517	5prime_fragment	FALSE	canonical	3	1230	junction_1	86.3901035998916	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAACAACAATTAAAAC	15572082	True	NA	34	True	NA	NA	NA	15591859	15597440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374
transcript_51543.known	chr2	-	1313	4	FSM	ENSG00000233718.9	ENST00000641263.1	1313	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGATCGATTGACTTCA	-15941366	False	NA	-2	True	ATTAAA	-14	NA	15941582	15936264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15937177_15938499_15938726_15940973_15941098_15941531
transcript_51544.known	chr2	-	770	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	0	6	0	multi-exon	FALSE	canonical	3	11	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGCGCCGCGGTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	15941723	15939897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15940352_15940973_15941098_15941531
transcript_51545.known	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	23	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	-15941022	False	216	NA	False	NA	NA	NA	15941238	15940120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15940352_15940973
transcript_51547.known	chr2	-	642	4	FSM	ENSG00000236989.5	ENST00000412381.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGAATCTTGCAATTG	-16105683	True	NA	NA	False	NA	NA	NA	16105841	16085221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_16085484_16097358_16097463_16105414_16105544_16105694
transcript_51548.nic	chr2	-	940	4	NIC	ENSG00000236989.5	novel	853	3	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGCTTCAATTAACA	-16105879	False	NA	0	True	AATAAA	-34	NA	16105900	16096425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_16096927_16097358_16097463_16105414_16105544_16105694
transcript_51551.known	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	11.0849462361281	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-16665068	True	NA	-3	True	ATTAAA	-23	NA	16665834	16549458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
transcript_5156.known	chr1	-	5238	3	FSM	ENSG00000233593.11	ENST00000659034.2	5247	3	9	0	1	0	multi-exon	FALSE	canonical	2	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATACCTTCAAAACCT	-90851296	True	NA	NA	False	AAAAAG	-39	NA	90851657	90778450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90783424_90789397_90789488_90851482
transcript_51568.known	chr2	+	2428	4	FSM	ENSG00000163032.12	ENST00000295156.9	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	56.3973994672331	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTATTCATTCATTTA	17533872	True	NA	NA	False	ACTAAA	-12	NA	17540695	17657018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17540919_17592069_17592237_17649409_17649626_17655196
transcript_5157.known	chr1	-	2292	2	FSM	ENSG00000233593.11	ENST00000655784.1	2292	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCATGCTCTGTGTAAT	-90851292	True	NA	NA	False	ATTAAA	-25	NA	90851653	90830075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90832197_90851482
transcript_51585.known	chr2	-	5240	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_26	66.8155949695769	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747576	True	NA	1	True	AATAAA	-19	NA	17753810	17663811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_51586.known	chr2	-	5173	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_26	38.8074635961851	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747596	True	NA	1	True	AATAAA	-19	NA	17753830	17663811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_51595.nic	chr2	-	422	2	ISM	ENSG00000163029.16	ENST00000621152.4	500	4	19	11206	0	-11149	5prime_fragment	FALSE	canonical	3	46	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAGAAAAACCCAAA	-17747576	True	NA	NA	False	ATTAAA	-45	NA	17753810	17752827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_17753065_17753625
transcript_51596.known	chr2	+	9957	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.1828290684709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGATGCCAGAAGCC	17753164	True	NA	NA	False	ATTAAA	-26	NA	17754137	17788946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_51597.known	chr2	+	9854	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.8172843413853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCCAGATGCCAG	17753210	True	NA	NA	False	ATTAAA	-21	NA	17753857	17788941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_51598.known	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_2	7	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	17877190	True	NA	9	True	AATAAA	-20	NA	17878666	17932958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17878807_17917679_17917872_17930949
transcript_51599.known	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	-18558778	True	NA	-6	True	AATAAA	-22	NA	18560653	18554722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_18555809_18560179
transcript_51600.known	chr2	-	737	2	FSM	ENSG00000240857.2	ENST00000468071.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAACTTGTTACTTGAA	-18560619	False	NA	NA	False	TATAAA	-41	NA	18560679	18555121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_18555809_18560629
transcript_51601.nic	chr2	-	1593	3	NIC	ENSG00000183891.6	novel	941	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	80	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-19901849	True	NA	-2	True	AATAAA	-18	NA	19901959	19896630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_19897127_19897868_19898036_19901029
transcript_51602.nnic	chr2	-	884	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-19901586	False	NA	-2	True	AATAAA	-18	NA	19901696	19896630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_51603.known	chr2	-	941	3	FSM	ENSG00000183891.6	ENST00000333610.4	941	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	74	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-19901873	True	NA	-2	True	AATAAA	-18	NA	19901983	19896630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_19897127_19897868_19898036_19901705
transcript_51605.nic	chr2	-	1206	3	NIC	ENSG00000183891.6	novel	779	2	NA	NA	-54	-111	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	80	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-19900252	True	NA	-24	True	ATTAAA	-15	NA	19901695	19896753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_19897127_19897868_19898036_19901029
transcript_51606.nnic	chr2	-	761	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-55	-111	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-19901586	False	NA	-24	True	ATTAAA	-15	NA	19901696	19896753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_51610.known	chr2	-	6898	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_6	16.3887679822594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTGTTTATTCCACG	-19987248	True	NA	-1	True	AATAAA	-16	NA	19990105	19910262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_51614.nic	chr2	-	907	5	ISM	ENSG00000118965.16	ENST00000414212.5	3483	28	-103	64858	-46	-30244	5prime_fragment	FALSE	canonical	3	125	junction_1	4.76969600708473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTCGTTTTTATTG	-19987294	True	NA	NA	False	AATATA	-20	NA	19990151	19978415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_51615.known	chr2	+	1132	3	FSM	ENSG00000227210.2	ENST00000416575.2	1132	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGAAATAAATTATATTG	19990119	True	NA	NA	False	AATAAA	-19	NA	19990210	20004795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_19990495_19999205_19999278_20004019
transcript_5162.known	chr1	-	717	2	FSM	ENSG00000233593.11	ENST00000670028.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTCATGATTGTAAT	-90851259	True	NA	NA	False	AATAAA	-15	NA	90851620	90837186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90837766_90851482
transcript_51620.known	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3000	junction_3	260.065002558121	2885	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-20025240	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
transcript_51624.known	chr2	-	510	1	FSM	ENSG00000279307.2	ENST00000624084.2	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTATGGTCAAATCTT	NA	False	NA	NA	False	AATGAA	-4	NA	20529976	20529466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20529500_20530000
transcript_51625.known	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.64371047599825	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-20649616	True	NA	-14	True	AATAAA	-19	NA	20651098	20617817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_51629.known	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	-20649602	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20641181_20645339_20645506_20651031
transcript_51635.nic	chr2	-	2924	7	NIC	ENSG00000118961.15	novel	3917	7	NA	NA	-3	-646	intron_retention	FALSE	canonical	2	6	junction_5	37.2413300872387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACCTGGTCTGGCCT	-20820508	True	NA	-8	True	AATAAA	-14	NA	20823117	20685057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801291_20801466_20823036
transcript_51636.known	chr2	-	3917	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	9.322910847298	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	-20820492	True	NA	-17	True	TTTAAA	-7	NA	20823101	20684030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_51639.known	chr2	-	1179	6	FSM	ENSG00000118961.15	ENST00000626491.2	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	35.0119979435621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTTGGTAGGCAGGA	-20820492	True	NA	NA	False	NA	NA	NA	20823101	20686624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
transcript_5164.known	chr1	-	2036	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	84.9012498272094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-91021436	False	NA	NA	False	AATAAA	-18	NA	91021457	90915303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
transcript_51644.known	chr2	+	6022	7	FSM	ENSG00000173960.14	ENST00000309033.5	6022	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	27.5962960477589	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCCTTGTTATAAAATA	23935283	True	NA	20	True	ATTAAA	-17	NA	23940462	24004909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_23940649_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_51646.known	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	311.078510990393	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044744	True	NA	19	True	AATAAA	-19	NA	24049730	24063681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
transcript_5165.known	chr1	-	1253	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	83.0675762390009	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCTAAAAGAAATATGT	-91019869	True	NA	NA	False	AAAAAG	-25	NA	91022272	90916184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
transcript_51650.nic	chr2	+	1103	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_3	293.666796727175	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044710	True	NA	19	True	AATAAA	-19	NA	24049696	24063681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063018
transcript_51651.nic	chr2	+	1058	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_3	302.063217721059	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044710	True	NA	19	True	AATAAA	-19	NA	24049696	24063681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063063
transcript_51653.nic	chr2	+	1082	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_2	329.741186387142	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044710	True	NA	19	True	AATAAA	-19	NA	24049696	24063681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063018
transcript_51654.known	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	340.95087622706	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	24044784	True	NA	9	True	AATAAA	-9	NA	24049770	24063671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
transcript_51659.known	chr2	+	1010	4	FSM	ENSG00000119782.14	ENST00000380991.8	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	213.830670287392	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044714	True	NA	19	True	AATAAA	-19	NA	24049700	24063681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063018
transcript_51660.known	chr2	+	925	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	156.597147696459	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044754	True	NA	19	True	AATAAA	-19	NA	24049740	24063681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
transcript_51665.known	chr2	-	3848	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	19.2584757675391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-24045481	True	NA	-15	True	AATAAA	-15	NA	24047391	24029346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
transcript_51666.known	chr2	-	3700	3	FSM	ENSG00000163026.12	ENST00000406895.3	3700	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	86	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-24045451	True	NA	-15	True	AATAAA	-15	NA	24047361	24029346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24031163_24037676_24039513_24047313
transcript_51667.known	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	73.9233837609363	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	-24058901	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
transcript_51669.known	chr2	-	720	2	FSM	ENSG00000115128.7	ENST00000478050.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGTATAAAAGTAACA	-24058948	True	NA	NA	False	AATAAA	-7	NA	24076373	24073648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24074195_24076199
transcript_51686.known	chr2	-	1635	6	FSM	ENSG00000115129.14	ENST00000335934.8	1635	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	48.4916487655349	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24085205	False	NA	-7	True	AATAAA	-14	NA	24085215	24077432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_51688.nic	chr2	-	1138	6	NIC	ENSG00000115129.14	novel	1635	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	68.5816301935147	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24082971	True	NA	-7	True	AATAAA	-14	NA	24084834	24077432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_24077762_24079443_24079641_24080818_24081032_24083000_24083153_24084188_24084332_24084730
transcript_51689.nnic	chr2	-	1351	6	NNC	ENSG00000115129.14	novel	1635	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	79.8122797569397	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24082971	True	NA	-7	True	AATAAA	-14	NA	24084834	24077432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_24077859_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_51693.known	chr2	-	1653	5	FSM	ENSG00000115129.14	ENST00000238721.9	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	20.7484939212464	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24082971	True	NA	-7	True	AATAAA	-14	NA	24084834	24077432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188
transcript_51702.nic	chr2	-	1075	4	ISM	ENSG00000115129.14	ENST00000335934.8	1635	6	107	3313	107	0	5prime_fragment	FALSE	canonical	3	78	junction_3	62.4179461373089	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-24085098	False	NA	0	True	AATAAA	-22	NA	24085108	24080745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_24081032_24082884_24083153_24084188_24084332_24084730
transcript_51705.known	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	6	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-24084301	False	NA	0	True	AATAAA	-22	NA	24084311	24080745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24081032_24082884_24083153_24084188
transcript_51707.known	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	69.4732366616447	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	24788297	True	NA	13	True	AATAAA	-16	NA	24793461	24822373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_51709.known	chr2	+	4272	7	FSM	ENSG00000138092.11	ENST00000473706.5	4272	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	58.3666571482954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	24792897	True	NA	16	True	AATAAA	-19	NA	24793144	24822376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793502_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_5171.nic	chr1	-	1254	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-165	25185	87	466	5prime_fragment	FALSE	canonical	3	86	junction_2	32	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCGAAAAATGGATGTA	-91021617	False	NA	NA	False	GATAAA	-38	NA	91021638	90940482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_5172.nnic	chr1	-	1206	3	NIC	ENSG00000122482.22	novel	514	3	NA	NA	8	466	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	62	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCGAAAAATGGATGTA	-91021985	False	NA	NA	False	GATAAA	-38	NA	91022006	90940482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_90941310_90982309_90982371_91021688
transcript_51722.known	chr2	-	1120	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	0	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTGTCATTTCA	-24786506	False	NA	1	True	AATGAA	-18	NA	24793391	24789727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24790582_24793125
transcript_51723.known	chr2	-	624	2	FSM	ENSG00000184924.6	ENST00000474668.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTCTTATTAATAAG	-24786189	False	NA	NA	False	ATTAAA	-16	NA	24793074	24790265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24790582_24792766
transcript_51724.known	chr2	+	1579	5	FSM	ENSG00000138092.11	ENST00000491031.5	1579	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	61.8157544643758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGGGTCAGTAAACAC	24788235	True	NA	NA	False	NA	NA	NA	24793399	24816571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496
transcript_51725.known	chr2	+	255	2	FSM	ENSG00000224165.7	ENST00000421842.2	348	2	91	2	18	-2	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTCAGTGAATAT	24972103	True	NA	NA	False	AATAAA	-22	NA	24972182	24972830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24972233_24972625
transcript_51727.known	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_17	115.484125893273	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	-25252294	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
transcript_51729.known	chr2	-	2300	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_17	66.7713134848961	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGATGGAGAGAAGTAT	-25252294	False	NA	-42	True	AATAAA	-12	NA	25252311	25234196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
transcript_5173.known	chr1	-	514	3	FSM	ENSG00000122482.22	ENST00000498303.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	28.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAACCACTGGACA	-91022060	False	NA	NA	False	AATAAA	-7	NA	91022081	90940948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90941310_90982309_90982371_91021989
transcript_51734.known	chr2	-	1775	4	FSM	ENSG00000119772.19	ENST00000406659.3	1775	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	21.4631467093403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAAGCTTTTATTCATT	NA	False	NA	-5	True	AATACA	-15	NA	25342590	25281451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25282712_25300138_25300244_25313912_25314162_25342429
transcript_51736.known	chr2	-	2464	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	66.5507949633159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	NA	False	NA	-24	True	AAAAAG	-5	NA	25673647	25377244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_51737.known	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.5018298837152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	-25668336	True	NA	-22	True	AAAAAG	-7	NA	25673634	25377242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_5174.known	chr1	-	820	2	FSM	ENSG00000122482.22	ENST00000495966.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGCAATTATATCATA	-91022034	False	NA	NA	False	ATTAAA	-3	NA	91022055	91020447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_91021202_91021989
transcript_51742.nnic	chr2	-	1267	9	NNC	ENSG00000138101.20	novel	1002	6	NA	NA	5	18327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.7822236899938	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTATATCTTCATTT	-25668258	True	NA	-1	True	AATAAA	-19	NA	25673556	25558188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_25558408_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_51753.known	chr2	+	3561	6	FSM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_3	85.2797748589899	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGGTTTGGTTTTCA	26034049	False	NA	14	True	TATAAA	-19	NA	26034083	26137454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26034736_26098661_26098723_26109767_26109907_26127143_26127234_26127849_26127952_26134937
transcript_51760.known	chr2	+	1292	5	FSM	ENSG00000084733.11	ENST00000495146.5	1292	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	594.771384651279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTATAAGAATAAAGTT	26024242	True	NA	22	True	ATTAAA	-33	NA	26034106	26135347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26034736_26098661_26098723_26127143_26127234_26127849_26127952_26134937
transcript_51762.known	chr2	-	2748	21	FSM	ENSG00000084754.12	ENST00000643063.1	2748	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	311.886273343345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGCACCCAGCCAAAC	-26231919	True	NA	-61	True	NA	NA	NA	26244604	26190921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26210694_26210815_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_51765.known	chr2	-	2688	20	FSM	ENSG00000084754.12	ENST00000643233.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	235.656435682691	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTCTGTGTCAGCA	-26231941	True	NA	-28	True	AATAAA	-1	NA	26244626	26190888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_51769.known	chr2	-	2158	19	FSM	ENSG00000084754.12	ENST00000646483.1	2158	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	242.051704761148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTCATGCCTCGCTC	-26244585	False	NA	NA	False	NA	NA	NA	26244596	26191249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26238933_26239005_26239101_26239144_26244529
transcript_51779.known	chr2	+	1997	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_12	39.3307343774136	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	26242122	True	NA	14	True	AATAAA	-17	NA	26244938	26290465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_51787.nnic	chr2	+	1948	15	NIC	ENSG00000138029.14	novel	1997	16	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_12	136.103745693632	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	26242083	True	NA	14	True	AATAAA	-17	NA	26244899	26290465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284882_26284958_26285406_26285572_26289917
transcript_51789.known	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	141.73093580184	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	26244737	True	NA	13	True	AATAAA	-16	NA	26244747	26290464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_5179.nnic	chr1	+	3187	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_1	124.042781209742	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	NA	False	NA	17	True	AATAAA	-22	NA	91500807	91525764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_51791.known	chr2	+	1588	14	FSM	ENSG00000138029.14	ENST00000405867.7	1588	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	140.256147752063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAGATACATAAATATGG	26242109	True	NA	-39	True	TATAAA	-5	NA	26244925	26290412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_5180.known	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	40.4156094548048	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91493119	True	NA	17	True	AATAAA	-22	NA	91500850	91525764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_51803.known	chr2	+	670	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	13.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGAAATGAAAGAGTAA	26242103	True	NA	NA	False	AATAGA	-41	NA	26244919	26254956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429
transcript_51806.known	chr2	+	2567	2	FSM	ENSG00000286707.1	ENST00000653720.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAATAATTCCTCCT	26298558	True	NA	-13	True	TTTAAA	-30	NA	26298569	26306340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26298627_26303830
transcript_51808.known	chr2	+	8066	10	FSM	ENSG00000138018.19	ENST00000260585.12	8066	10	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_7	13.0639452948436	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	26341181	True	NA	24	True	AATAAA	-31	NA	26346142	26395885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039_26375149_26383298_26383348_26384958_26385140_26386353_26386537_26389004
transcript_51810.nic	chr2	+	1805	6	ISM	ENSG00000138018.19	ENST00000260585.12	8066	10	-75	19779	-75	2600	5prime_fragment	FALSE	canonical	3	79	junction_3	8.95767827062348	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAATAAATAAAAAATAA	26341106	True	NA	NA	False	NA	NA	NA	26346067	26376106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039
transcript_51812.known	chr2	+	3902	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	5.16139516022558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTCTGCAGGCTATA	26762810	True	NA	20	True	TATAAA	-20	NA	26764283	26781231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
transcript_51813.known	chr2	+	3605	5	FSM	ENSG00000213699.9	ENST00000414029.1	3605	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	9.8836987003854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	26762851	True	NA	16	True	AAAAAG	-18	NA	26764324	26781147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26764427_26774250_26774324_26775463_26775677_26776371_26776483_26778041
transcript_51816.known	chr2	+	2978	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	0	0	0	0	multi-exon	TRUE	canonical	2	269	junction_10	29.0446181546599	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	27026976	True	NA	19	True	AATAAA	-21	NA	27032964	27041694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_5182.nnic	chr1	+	3174	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	119.92077274408	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91493126	True	NA	17	True	AATAAA	-22	NA	91500857	91525764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_91500949_91501687_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_51821.known	chr2	+	2382	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	35.3396378023318	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	27045576	True	NA	16	True	AATAAA	-18	NA	27051677	27059535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
transcript_51826.known	chr2	+	1850	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	30.4380062129934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	27045579	True	NA	-81	True	AAAAAG	-23	NA	27051680	27056464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
transcript_51828.known	chr2	-	458	3	FSM	ENSG00000228474.6	ENST00000447619.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-27030250	True	NA	-1	True	TATAAA	-30	NA	27071649	27070471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27070743_27071325_27071464_27071600
transcript_51829.known	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3919	junction_2	486.5	3918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-27030255	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27070722_27071325_27071464_27071600
transcript_51830.known	chr2	+	3188	15	FSM	ENSG00000084693.16	ENST00000360131.5	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	119.51381100278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	27045566	True	NA	8	True	AATAAA	-16	NA	27051667	27070618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069572_27069707_27070091
transcript_51831.known	chr2	-	559	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4892	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTCCCAAAATCTTG	-27030250	True	NA	-16	True	TATAAA	-15	NA	27071649	27070486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27070722_27071325
transcript_51832.known	chr2	+	2411	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	54.539257532945	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	27085506	True	NA	20	True	TATAAA	-16	NA	27086746	27100751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_51833.nnic	chr2	+	1498	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	41	junction_2	54.1109970338747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085502	True	NA	8	True	AATAAA	-16	NA	27086742	27099969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_51834.nnic	chr2	-	1599	7	NNC	ENSG00000138028.17	novel	1610	7	NA	NA	-6371	34	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.8269211792745	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCCCGGCCACCTCTCT	-27110885	False	223	-8	True	AATAAA	-16	NA	27111108	27101078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27101462_27101512_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27110621
transcript_51836.nnic	chr2	+	1382	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	72	junction_1	44.2429655425583	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085501	True	NA	8	True	AATAAA	-16	NA	27086741	27099969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_51837.nnic	chr2	+	885	6	NNC	ENSG00000138030.13	novel	2411	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.670213980695	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085502	True	NA	8	True	AATAAA	-16	NA	27086742	27099969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_27086856_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_51839.nnic	chr2	-	1952	10	NNC	ENSG00000138073.14	novel	2127	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	172.391314839521	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	-27125389	True	NA	-3	True	AATAAA	-29	NA	27134675	27130755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286_27134362_27134575
transcript_51848.nic	chr2	-	3027	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	20	0	intron_retention	FALSE	canonical	3	120	junction_16	166.0252239872	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211725	False	NA	0	True	AATAAA	-21	NA	27211773	27199586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211710
transcript_51849.nic	chr2	-	3110	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-24	0	intron_retention	FALSE	canonical	3	229	junction_16	140.952216526559	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211864	False	1512	0	True	AATAAA	-21	NA	27211912	27199586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
transcript_51850.nic	chr2	-	3041	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-38	0	intron_retention	FALSE	canonical	3	295	junction_16	126.030982673904	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211928	False	NA	0	True	AATAAA	-21	NA	27211976	27199586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
transcript_51851.known	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_16	163.24464003452	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27210756	True	NA	0	True	AATAAA	-21	NA	27212268	27199586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
transcript_51869.known	chr2	+	1256	7	FSM	ENSG00000138085.18	ENST00000380171.9	1227	7	-10	-19	-10	-2	multi-exon	FALSE	canonical	3	1664	junction_1	165.946527532214	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAAGGCGCCCTGCCTT	27209216	True	NA	47	True	AATAAA	-35	NA	27212030	27217176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27212468_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_51871.known	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	610.948647596506	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	27203516	False	NA	49	True	AATAAA	-37	NA	27212369	27217178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_51878.known	chr2	-	2936	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.38448456189719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	-27262458	True	NA	NA	False	NA	NA	NA	27263047	27253683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
transcript_5188.nic	chr1	+	3137	11	NIC	ENSG00000097046.13	novel	3215	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	132.1830548898	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91493101	True	NA	17	True	AATAAA	-22	NA	91500832	91525764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_51880.known	chr2	+	2027	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.93322277432968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTGGTGGCTCTGCCC	27282450	False	NA	13	True	ATTAAA	-18	NA	27282461	27307439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_51881.known	chr2	+	1930	9	FSM	ENSG00000138100.14	ENST00000380075.7	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	4.4087980221371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTGCCCTGGTGGCTCT	27282417	True	NA	9	True	ATTAAA	-14	NA	27282428	27307435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_51898.known	chr2	-	905	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	192.983873705043	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGGTGCCTCAGTA	-27317905	True	NA	-53	True	NA	NA	NA	27323083	27309539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_51899.nnic	chr2	-	1049	8	NNC	ENSG00000115204.15	novel	1002	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	185.036565608652	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317904	True	NA	-5	True	ATTAAA	-15	NA	27323082	27309491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27322989
transcript_51900.known	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_7	99.2995879309945	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317919	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_51902.known	chr2	-	859	8	FSM	ENSG00000115204.15	ENST00000405983.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	205.345701544632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCCCAGCAAATGCCAC	-27317885	True	NA	NA	False	CATAAA	-39	NA	27323063	27309645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313155_27322447_27322523_27323051
transcript_51903.known	chr2	-	597	8	FSM	ENSG00000115204.15	ENST00000415514.5	597	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	254.176943028566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCATCGTTTCCACCTT	-27317885	True	NA	NA	False	NA	NA	NA	27323063	27309903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27317077_27317235_27322447_27322523_27323051
transcript_51907.known	chr2	-	665	8	FSM	ENSG00000115204.15	ENST00000403262.6	665	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	194.553491935996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGCACTGAAGATGT	-27317889	True	NA	NA	False	AATAAA	-27	NA	27323067	27311494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27311678_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_51912.nnic	chr2	-	899	7	NIC	ENSG00000115204.15	novel	1002	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_5	201.274618922064	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317932	True	NA	-5	True	ATTAAA	-15	NA	27323110	27309491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27322447_27322523_27323051
transcript_51914.known	chr2	-	896	7	FSM	ENSG00000115204.15	ENST00000621183.4	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	105.043906164148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCCTCAAAGTGGGCAT	-27317924	True	NA	NA	False	NA	NA	NA	27323102	27309849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_51919.known	chr2	-	827	6	FSM	ENSG00000115204.15	ENST00000402722.5	827	6	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_1	229.271542063118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAGTAAATATGTTAT	-27317903	True	NA	-43	True	NA	NA	NA	27323081	27309529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_51927.known	chr2	-	998	7	FSM	ENSG00000115204.15	ENST00000233545.6	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	66.4897652942834	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27322554	False	NA	-5	True	ATTAAA	-15	NA	27322564	27309491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447
transcript_51931.known	chr2	-	3882	19	FSM	ENSG00000115207.14	ENST00000264720.7	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_18	58.9556225656109	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27357018	True	NA	-7	True	ATTAAA	-24	NA	27357034	27325848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_51939.known	chr2	-	1771	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	15	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	232.926328602442	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCAACTCTGCTGC	-27361660	True	NA	-11	True	AATAAA	-14	NA	27370300	27364362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367803_27367804_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
transcript_51942.known	chr2	-	1754	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-119	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	234.693858250683	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27370439	False	NA	0	True	AATAAA	-25	NA	27370457	27364351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369892_27369893_27369920_27370283
transcript_51948.known	chr2	-	1570	13	FSM	ENSG00000115211.17	ENST00000405940.6	1570	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	182.171222114435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATACTCCCTACCCTC	-27361675	True	NA	-25	True	NA	NA	NA	27370315	27364376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368114_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_51950.known	chr2	-	1608	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_10	113.599687010523	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCCATACTCCCTAC	-27361694	True	NA	-29	True	NA	NA	NA	27370334	27364380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
transcript_51951.known	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	91.3665921804391	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27361698	True	NA	0	True	AATAAA	-25	NA	27370338	27364351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_5196.known	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	129.005605618484	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91500793	True	NA	17	True	AATAAA	-22	NA	91501107	91525764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_51995.known	chr2	+	2007	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	377.221361478318	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	27361831	True	NA	16	True	ATTAAA	-16	NA	27370627	27377123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_52.known	ERCC-00143	+	767	1	FSM	ERCC-00143A	DQ668362	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00143_+_0_800
transcript_520.known	chr1	+	1404	7	FSM	ENSG00000157916.20	ENST00000378512.5	1404	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	383.436399187952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGATTATTTTGAC	2381622	True	NA	9	True	TATAAA	-18	NA	2391889	2403751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402096_2402343_2403034
transcript_52002.known	chr2	+	2357	15	FSM	ENSG00000115234.11	ENST00000233575.7	2357	15	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_6	51.1968988218973	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGTTCAGGATGAGT	27361819	True	NA	NA	False	TATAAA	-14	NA	27370615	27377535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_52014.known	chr2	+	2400	14	FSM	ENSG00000115234.11	ENST00000537606.5	2400	14	0	0	0	0	multi-exon	TRUE	canonical	2	39	junction_1	294.927992415198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCTAGTTCAGGATGA	27370485	False	NA	NA	False	TATAAA	-12	NA	27370495	27377533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27370807_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_52016.known	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.2339898266013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27379015	True	NA	-43	True	AATAAA	-16	NA	27380734	27377234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
transcript_52018.known	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27380308	False	1719	-43	True	AATAAA	-16	NA	27380444	27377234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27378372_27378466_27379055_27380092
transcript_52023.known	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_1	255.705374903081	1126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	27410616	True	NA	29	True	AATAAA	-20	NA	27428630	27442259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_52049.known	chr2	-	1832	16	FSM	ENSG00000138002.16	ENST00000511842.5	1832	16	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	8.04874041215284	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGCAAATAAAGCTTA	-27488956	False	NA	-41	True	NA	NA	NA	27489678	27470812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_5205.known	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_12	42.4179673088808	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-92295723	True	NA	69	True	AATAAA	-19	NA	92298987	92246401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_52052.known	chr2	+	872	7	FSM	ENSG00000157992.12	ENST00000288873.7	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	123.022694383326	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438692	True	NA	21	True	AATAAA	-21	NA	27442380	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52053.nic	chr2	+	897	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_6	140.382809963803	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438664	True	NA	21	True	AATAAA	-21	NA	27442352	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52054.known	chr2	+	956	7	FSM	ENSG00000157992.12	ENST00000543753.5	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	185.200791934952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTGGGTCTTAGTTT	27438677	True	NA	5	True	ATTAAA	-18	NA	27442365	27446481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27446300
transcript_52056.nic	chr2	+	1018	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-28	6	-13	0	intron_retention	FALSE	canonical	3	291	junction_1	96.7479198742795	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438664	True	NA	15	True	AATAAA	-15	NA	27442352	27444291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_52061.nic	chr2	+	978	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	227	junction_5	134.737671050082	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438664	True	NA	21	True	AATAAA	-21	NA	27442352	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442441_27442578_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52062.nic	chr2	+	975	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	164	junction_5	153.762153991156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438664	True	NA	21	True	AATAAA	-21	NA	27442352	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442441_27442578_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52064.nic	chr2	+	687	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	204.797851551231	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438692	True	NA	21	True	AATAAA	-21	NA	27442380	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52065.known	chr2	+	665	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	214.791619948265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	27438709	True	NA	19	True	AATAAA	-19	NA	27442397	27444295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52066.nic	chr2	+	981	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	227	junction_5	119.415241908225	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438721	True	NA	21	True	AATAAA	-21	NA	27442409	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52067.known	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	142.700525577168	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438757	True	NA	21	True	AATAAA	-21	NA	27442445	27444297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52089.known	chr2	+	3531	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	46.2761200830496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	27578525	True	NA	9	True	AATAAA	-25	NA	27583041	27623217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_52090.known	chr2	+	3417	14	FSM	ENSG00000243943.10	ENST00000379717.5	3417	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	59.4058351884549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	27578513	True	NA	13	True	AATAAA	-14	NA	27583029	27623094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27583143_27583657_27583717_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_52096.known	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_11	63.1183728725863	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	27619311	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_52102.known	chr2	+	2544	14	FSM	ENSG00000163798.13	ENST00000618046.4	2544	14	0	0	0	0	multi-exon	FALSE	canonical	2	165	junction_6	37.661211662735	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATATTTTATTTTATT	27661200	True	NA	12	True	ATTAAA	-19	NA	27663888	27694972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036_27685278_27687933_27688021_27688699_27688768_27693684_27693755_27694633
transcript_52103.known	chr2	+	3515	13	FSM	ENSG00000243943.10	ENST00000416005.6	3515	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	81.8322725661052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	27578452	True	NA	7	True	AATAAA	-23	NA	27582968	27623215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27583143_27583657_27583717_27598069_27598255_27599582_27599679_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_52105.known	chr2	+	3543	13	FSM	ENSG00000243943.10	ENST00000556601.5	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	40.271991921599	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	27578452	True	NA	7	True	AATAAA	-23	NA	27582968	27623215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_52118.nic	chr2	+	1702	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	209.5145905095	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTTCTAAGACTGCT	27619280	True	NA	26	True	GATAAA	-15	NA	27629018	27650844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_52131.known	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	36.5918023606381	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	-27660750	True	NA	-17	True	ATTAAA	-28	NA	27663614	27650808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
transcript_52132.known	chr2	-	2280	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	65.9047797963092	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTTTCATTTAACTT	-27660775	True	NA	-15	True	AATATA	-14	NA	27663639	27653062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
transcript_52139.known	chr2	-	2869	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	24.3567239176372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTGATTCATTTTT	-27660776	True	NA	-4	True	AATATA	-25	NA	27663640	27653051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
transcript_52140.known	chr2	-	4114	5	FSM	ENSG00000119760.16	ENST00000404798.6	4114	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	80.6826344388927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATTCTGATTCATT	-27663821	False	NA	-20	True	ATTAAA	-25	NA	27663840	27650811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27662178_27662282_27663328
transcript_52146.known	chr2	-	2343	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTCCAATGTAACAC	-27628824	True	NA	1	True	AATAAA	-22	NA	27629012	27625637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27627918_27628949
transcript_52147.known	chr2	-	560	2	FSM	ENSG00000176714.10	ENST00000522876.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGCCAGAGAAGCTAAC	-27628703	False	NA	NA	False	AATAAA	-8	NA	27628891	27627859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27627918_27628389
transcript_52154.known	chr2	+	508	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_3	547.559636528804	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	27762457	True	NA	11	True	AATAAA	-14	NA	27771718	27779733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
transcript_52156.known	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	438.317236713319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	27772028	False	NA	-25	True	NA	NA	NA	27772189	27779697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
transcript_52161.known	chr2	+	404	3	FSM	ENSG00000243147.8	ENST00000379666.7	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_2	408	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	27762455	True	NA	12	True	AATAAA	-15	NA	27771716	27779734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27771800_27772673_27772693_27779432
transcript_52164.known	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	636.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	27771813	True	NA	9	True	AATAAA	-12	NA	27771974	27779731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27772386_27772673_27772693_27779432
transcript_52166.known	chr2	-	1247	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.614031611621	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTAACCTCAATTGTC	-27890139	True	NA	NA	False	ATTAAA	-33	NA	27890387	27781378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_52169.known	chr2	+	1752	14	FSM	ENSG00000158019.21	ENST00000379632.6	1752	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	87.4133890872329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888288	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_52171.known	chr2	+	1681	13	FSM	ENSG00000158019.21	ENST00000342045.6	1681	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	69.6987067471285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888287	True	NA	21	True	ATTAAA	-27	NA	27890791	28338901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_52172.known	chr2	+	1686	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	71.4288204360739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888288	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_52174.known	chr2	+	1852	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	70.515955641259	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888224	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
transcript_52176.known	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_11	15.7967461865615	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888224	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_52182.known	chr2	+	4771	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	99.070366406913	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	28732699	True	NA	11	True	ATTAAA	-11	NA	28751747	28802930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_52185.known	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	65.616697725565	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	28732781	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_52193.nnic	chr2	-	1859	7	NNC	ENSG00000171103.11	novel	1844	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	93.6352260399661	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867354	True	NA	NA	False	AATAAA	-20	NA	28870305	28849820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869559
transcript_52194.known	chr2	-	1844	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.3715409992584	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867358	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_52197.nic	chr2	-	1820	7	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	86.5917945817552	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867361	True	NA	NA	False	AATAAA	-20	NA	28870312	28849820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_28850243_28850327_28850406_28851098_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_522.known	chr1	+	3028	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	115.149178604684	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	2381573	True	NA	24	True	AATAAA	-16	NA	2391840	2405436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_52201.nnic	chr2	+	2726	6	NIC	ENSG00000213639.10	novel	4916	8	NA	NA	0	-611	intron_retention	FALSE	canonical	3	230	junction_5	107.689553810943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28732781	True	NA	21	True	AGTAAA	-15	NA	28751829	28801037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28799198
transcript_52208.known	chr2	-	1584	6	FSM	ENSG00000171103.11	ENST00000439947.1	1584	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	104.346729704385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCATTTTAAGATAAAT	-28867344	True	NA	NA	False	AATAAA	-1	NA	28870295	28849839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_28850243_28850327_28850406_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_52211.nnic	chr2	+	2168	5	NNC	ENSG00000213639.10	novel	4771	9	NA	NA	3	-611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204.731989439853	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28751692	False	NA	21	True	AGTAAA	-15	NA	28751741	28801037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_28751821_28752037_28752177_28781803_28781843_28783906_28783979_28799198
transcript_52215.nnic	chr2	-	1534	5	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	109.857862713599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867342	True	NA	NA	False	AATAAA	-20	NA	28870293	28849820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28869578
transcript_52218.nnic	chr2	+	2325	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	-12	-611	intron_retention	FALSE	canonical	0	0	junction_1	231.984194863932	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28732753	True	NA	21	True	AGTAAA	-15	NA	28751801	28801037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_52219.nnic	chr2	+	2941	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	-12	5	intron_retention	FALSE	canonical	0	0	junction_1	231.984194863932	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGTAATTCCAGTGT	28732753	True	NA	25	True	AATAAA	-26	NA	28751801	28801653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_52222.known	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	73.0430029285257	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	28884369	True	NA	17	True	AATAAA	-17	NA	28894666	28948219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
transcript_52231.nic	chr2	+	1447	11	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-59	18590	-59	3144	5prime_fragment	FALSE	canonical	3	576	junction_7	65.3020673485917	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGACCTCCAGAC	28894597	False	NA	NA	False	NA	NA	NA	28894607	28929629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578
transcript_52233.nic	chr2	+	285	2	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-6	46211	-6	-96	5prime_fragment	FALSE	canonical	3	772	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCAGAAGCTGTAGGA	28884363	True	NA	NA	False	AAAACA	-43	NA	28894660	28902008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_28894924_28901986
transcript_52236.known	chr2	+	2560	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	68.9021044671351	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144774	True	NA	9	True	AATAAA	-18	NA	30146940	30160533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_52238.known	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	78.1636459970718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
transcript_52240.known	chr2	+	2499	4	FSM	ENSG00000119801.13	ENST00000379519.7	2499	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	64.9632374672185	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144774	True	NA	9	True	AATAAA	-18	NA	30146940	30160533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30148244_30148542_30156627_30156793_30158618
transcript_52243.known	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	17.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30156627_30156793_30158618
transcript_52245.known	chr2	+	653	3	FSM	ENSG00000119801.13	ENST00000470120.5	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	93	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGATGGAACCTTTCT	30147876	True	NA	NA	False	AATGAA	-24	NA	30147951	30158966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30148092_30156627_30156793_30158618
transcript_52246.known	chr2	+	2930	3	FSM	ENSG00000213626.13	ENST00000395323.9	2930	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	3	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTCTGGTTTCCTTTT	30225047	True	NA	10	True	AATAAA	-19	NA	30231533	30260028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30231765_30234404_30234508_30257432
transcript_52250.known	chr2	+	4879	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	14.2070405081424	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444780	True	NA	13	True	AATAAA	-21	NA	30447245	30644225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_52252.known	chr2	-	2683	23	FSM	ENSG00000162949.16	ENST00000295055.12	2683	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.41202041518264	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTCATTCATATTCTG	-30807231	True	NA	NA	False	AATAAA	-17	NA	30807446	30722770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_30723237_30730729_30730787_30731343_30731400_30732437_30732567_30734448_30734525_30736502_30736572_30738234_30738294_30738399_30738458_30741907_30741965_30742325_30742360_30743382_30743580_30745722_30745735_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
transcript_52253.known	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	7.06276525599035	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	-31138088	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_52257.nnic	chr2	-	1605	10	NNC	ENSG00000162959.14	novel	1516	10	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.8832415611052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010955	False	NA	NA	False	AATAAA	-19	NA	32010968	31867822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010812
transcript_52258.known	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	72.5580227588009	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010995	False	NA	NA	False	AATAAA	-19	NA	32011008	31867822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
transcript_52260.known	chr2	-	4505	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	33.0529877620768	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGCTTCTTTATTAT	-32010544	False	NA	NA	False	TATAAA	-22	NA	32010557	31865059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_52266.known	chr2	-	1336	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	81.4220548770919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGGTGGAAGCTT	-32010362	False	NA	NA	False	NA	NA	NA	32010375	31867977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
transcript_52268.nic	chr2	-	1508	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	84.4731571904015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010387	False	NA	NA	False	AATAAA	-19	NA	32010400	31867822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_31868493_31869847_31869953_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_5227.nic	chr1	-	1902	18	NIC	ENSG00000174842.17	novel	2006	19	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	86.1032212282581	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	-92295751	True	NA	-21	True	AATAAA	-18	NA	92299015	92246491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_52270.known	chr2	-	1242	7	FSM	ENSG00000162959.14	ENST00000490459.5	1242	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	121.168500673878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	-32011023	False	64	NA	False	AATAAA	-15	NA	32011036	31867826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010941
transcript_52281.known	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	802.208548667711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	-32019635	True	NA	-23	True	AATAAA	-11	NA	32039754	32011885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_52282.known	chr2	-	523	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	776.395260160699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAATTCATA	-32019674	True	NA	-44	True	NA	NA	NA	32039793	32011906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_52288.known	chr2	-	631	5	FSM	ENSG00000162961.14	ENST00000295066.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	692.873184644925	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTGGATGTATAAGA	-32019686	True	NA	-148	True	NA	NA	NA	32039805	32024101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039592
transcript_52289.known	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1364	junction_4	171.680480835767	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	-32019686	True	NA	-31	True	AATAAA	-15	NA	32039805	32023904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_52294.known	chr2	-	712	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTAGCACGTGTG	-32165550	True	NA	NA	False	ATTAAA	-16	NA	32165757	32165045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32165000_32165800
transcript_52295.known	chr2	+	5089	14	FSM	ENSG00000152683.14	ENST00000282587.9	5089	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	10.9160323979736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGGCATCCTTTTG	32163248	True	NA	5	True	ATTAAA	-19	NA	32165863	32224379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_52300.known	chr2	+	4776	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	27.9149253188246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	32163225	True	NA	38	True	ATTAAA	-32	NA	32165840	32224112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
transcript_52309.known	chr2	+	2207	10	FSM	ENSG00000152683.14	ENST00000449777.5	2207	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	40.6775941602581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGGTTCTCAGTGTT	32163248	True	NA	20	True	TTTAAA	-22	NA	32165863	32221740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32165904_32171286_32171374_32192335_32192417_32192917_32192954_32193888_32193984_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_52310.known	chr2	+	11955	6	FSM	ENSG00000119820.11	ENST00000238831.9	11955	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	31.6644911533408	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTAATTTGTCTTTT	32272358	True	NA	NA	False	AATAAA	-16	NA	32277903	32316594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32278235_32290482_32290637_32292176_32292349_32298233_32298312_32301381_32301496_32305488
transcript_52313.known	chr2	+	2888	20	FSM	ENSG00000018699.13	ENST00000317907.9	2888	20	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_17	20.9030210277998	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	32623564	True	NA	5	True	AATAAA	-18	NA	32628049	32821051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_52317.known	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	63.3165033134074	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-33589413	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
transcript_52319.known	chr2	-	655	3	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	-35	8237	-35	-6309	5prime_fragment	FALSE	canonical	3	747	junction_1	78	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGACGTGTGCACTGG	-33599348	True	NA	NA	False	AATAAA	-30	NA	33599382	33591922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_33592215_33595488_33595638_33599168
transcript_52320.known	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	9.14508901330241	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-36595445	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_52325.known	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_16	22.8336374675609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151082	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_52326.known	chr2	-	10103	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	28.9697444543441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37157094	False	NA	0	True	AATAAA	-20	NA	37157192	37099209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
transcript_52332.known	chr2	-	9846	16	FSM	ENSG00000055332.19	ENST00000679979.1	9846	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	41.6276617433915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151082	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_52335.known	chr2	+	3839	9	FSM	ENSG00000152133.16	ENST00000674370.2	3839	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.60965203320114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	37083775	True	NA	47	True	AATAAA	-19	NA	37084517	37099244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_52338.known	chr2	+	3570	7	FSM	ENSG00000152133.16	ENST00000281932.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	12.0646407139026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	37083775	True	NA	47	True	AATAAA	-19	NA	37084517	37099244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37084571_37088368_37088441_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_52343.known	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_13	50.4630117566872	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	-37210859	True	NA	-10	True	AATAAA	-31	NA	37231596	37201611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_52370.nnic	chr2	+	967	6	NNC	ENSG00000218739.10	novel	3152	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	283.4689400975	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	37181628	True	NA	29	True	AATAAA	-33	NA	37196484	37204743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862_37202365_37204560
transcript_52386.known	chr2	+	687	6	FSM	ENSG00000218739.10	ENST00000406711.5	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	364.1298669431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTCCTGAAACAATT	37181648	True	NA	NA	False	AATATA	-2	NA	37196504	37203495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37196521_37198493_37198673_37199703_37199820_37201047_37201093_37201641_37201727_37203249
transcript_52387.nic	chr2	+	888	6	NIC	ENSG00000218739.10	novel	695	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	350.261844910347	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	37181637	True	NA	25	True	AATAAA	-29	NA	37196493	37204739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37196521_37198493_37198673_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_52388.known	chr2	+	3152	5	FSM	ENSG00000218739.10	ENST00000402297.6	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_1	92.2306890357	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	37181639	True	NA	29	True	AATAAA	-33	NA	37196495	37204743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862
transcript_5239.nic	chr1	-	571	3	ISM	ENSG00000174842.17	ENST00000495106.5	1833	18	-28	50629	-28	402	5prime_fragment	FALSE	canonical	3	303	junction_2	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAACAGTCATA	-92295751	True	NA	NA	False	NA	NA	NA	92299015	92297118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_92297530_92297960_92298030_92298924
transcript_52395.known	chr2	+	695	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	272.672422514636	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	37181651	True	NA	25	True	AATAAA	-29	NA	37196507	37204739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_5240.known	chr1	-	572	2	FSM	ENSG00000174842.17	ENST00000487911.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAGACTTTAAAGA	-92295723	True	NA	NA	False	NA	NA	NA	92298987	92297520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92298030_92298924
transcript_5241.known	chr1	-	769	3	FSM	ENSG00000174842.17	ENST00000471465.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	92248408	92246491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92246647_92247061_92247145_92247877
transcript_52416.nic	chr2	-	402	2	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-25	27233	-25	-237	5prime_fragment	FALSE	canonical	3	1079	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGTAAAAATACCTAAAAT	-37210884	False	NA	NA	False	AAAAAG	-18	NA	37231621	37228844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_37229037_37231411
transcript_52418.known	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_17	51.7375857358824	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	-37320477	False	NA	-15	True	AATAAA	-31	NA	37324833	37250501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
transcript_52434.nic	chr2	+	1785	11	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_10	81.6115800606752	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTTTTGTTTTGTGTT	37228254	True	NA	14	True	AAGAAA	-15	NA	37231640	37253403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134_37248427_37253085
transcript_52441.nic	chr2	+	1291	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	81.7706820593081	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	37228270	True	NA	NA	False	AATAAA	-19	NA	37231656	37248420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_52442.nic	chr2	+	2031	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	81.7706820593081	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	37228270	True	NA	13	True	AATAAA	-25	NA	37231656	37249160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_52445.known	chr2	+	2184	10	FSM	ENSG00000003509.16	ENST00000002125.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	53.6009489505089	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	37228271	True	NA	13	True	AATAAA	-25	NA	37231657	37249160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_5246.known	chr1	+	16899	13	FSM	ENSG00000122484.9	ENST00000610020.2	16899	13	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_6	14.0524809988209	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCAATTCTATTTTC	92297052	True	NA	2	True	AATAAA	-16	NA	92299058	92402056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_52460.nic	chr2	+	2311	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	229	junction_5	37.1430932341398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	37228247	True	NA	NA	False	AATAAA	-19	NA	37231633	37248420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_52470.nic	chr2	+	1518	4	ISM	ENSG00000003509.16	ENST00000455230.5	946	9	19	8655	-8	-2707	5prime_fragment	FALSE	canonical	3	314	junction_3	11.1455023315337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGTCACATTGGTAGT	37228263	True	NA	NA	False	CATAAA	-45	NA	37231649	37238921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756
transcript_52478.known	chr2	+	1683	7	FSM	ENSG00000115828.17	ENST00000338415.8	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	19.2995394303134	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCTTTTTTAT	37342902	True	NA	NA	False	ATTAAA	-18	NA	37344629	37373322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37344852_37352788_37352936_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_52479.known	chr2	+	992	6	FSM	ENSG00000115828.17	ENST00000404976.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	116.969397707264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGAAGAAAATTTGGATG	37344577	False	NA	NA	False	NA	NA	NA	37344593	37372742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37344852_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_52480.known	chr2	-	5096	2	FSM	ENSG00000163171.8	ENST00000295324.4	5096	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCATTTAATTATCT	-37667752	True	NA	-12	True	AATGAA	-18	NA	37671642	37641943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37646823_37671425
transcript_52482.known	chr2	+	1893	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.10783711564885	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTTCACTCGTGTCCA	37925027	True	NA	4	True	AATAAA	-31	NA	37925286	38017744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
transcript_52486.known	chr2	-	3805	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_1	32.5059823553894	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTAGACCATTGGCT	-38372887	True	NA	NA	False	ATTAAA	-24	NA	38377273	38293953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_52489.known	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	89.0012484306946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	-38372887	True	NA	-4	True	AATAAA	-24	NA	38377273	38295900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_52491.known	chr2	-	1600	12	FSM	ENSG00000119787.14	ENST00000651368.1	1600	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	95.3215523746201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	-38372876	True	NA	-6	True	AATAAA	-22	NA	38377262	38295902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
transcript_525.known	chr1	+	3000	6	FSM	ENSG00000157916.20	ENST00000378513.7	3000	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	382.710543361429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTTCTCAACTGTATG	2381507	True	NA	30	True	AATAAA	-22	NA	2391774	2405442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2400856_2400936_2402206_2402343_2403034
transcript_52501.nic	chr2	-	2342	9	NIC	ENSG00000119787.14	novel	1905	12	NA	NA	-2	269	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	85.6758972815576	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGTGATTCTTTTT	-38372901	True	NA	NA	False	ATTAAA	-21	NA	38377287	38294884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314655_38377142
transcript_52507.known	chr2	+	954	1	FSM	ENSG00000213553.4	ENST00000394878.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACCAAAAAGCAACCAACT	38481116	False	NA	NA	False	NA	NA	NA	38481850	38482804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38481800_38482800
transcript_52514.known	chr2	-	2779	14	FSM	ENSG00000143889.16	ENST00000358367.8	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_13	159.06077882667	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	-38602963	False	NA	-1	True	ATTAAA	-18	NA	38603036	38563185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_52522.known	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	288.079126861585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-38595237	True	NA	NA	False	AATAAA	-16	NA	38602929	38581074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_52524.known	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	9.2135166407235	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	38664613	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
transcript_52529.nic	chr2	+	1438	5	ISM	ENSG00000143891.17	ENST00000272252.10	2277	7	-50	4504	-17	-1541	5prime_fragment	FALSE	canonical	3	141	junction_4	10.0591997693654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTGTGTGTGTGCGTG	38664563	True	NA	7	True	AATAAA	-16	NA	38666063	38730261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555
transcript_52549.known	chr2	-	1944	9	FSM	ENSG00000115875.19	ENST00000425941.6	1944	9	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	940.564026262965	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAGTGTTAATTAGGAC	-38701258	True	NA	NA	False	NA	NA	NA	38751363	38744452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
transcript_5255.nic	chr1	+	462	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-49	97708	-49	-19736	5prime_fragment	FALSE	canonical	3	79	junction_2	7.17635004720366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTTTAAAGGCTTTCA	92297003	True	NA	NA	False	AATAAA	-24	NA	92299009	92304348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_5256.nic	chr1	+	1565	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-49	96605	-49	-18633	5prime_fragment	FALSE	canonical	3	79	junction_2	7.17635004720366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATATGGGAAGATATAA	92297003	True	NA	NA	False	NA	NA	NA	92299009	92305451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_52567.known	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	697.517785597249	3809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	-38701253	True	NA	30	True	AATAAA	-16	NA	38751358	38744892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_52586.known	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	185.691201251492	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	-38701247	True	NA	5	True	NA	NA	NA	38751352	38744917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
transcript_52594.known	chr2	-	2453	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	682.791980685837	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	NA	False	NA	63	True	AATAAA	-23	NA	38751494	38743598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_5261.known	chr1	-	2536	5	FSM	ENSG00000154511.12	ENST00000370310.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	1.92028643696715	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGATGGTTGGTC	-92960765	True	NA	-10	True	AATAAA	-16	NA	92961462	92842166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92876295_92876431_92961375
transcript_52610.known	chr2	+	834	4	FSM	ENSG00000152147.11	ENST00000409566.1	834	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	139.557236366382	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTTAAATGTAAATG	38774084	True	NA	-8	True	AAAAAG	-21	NA	38778209	38781947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38778282_38778971_38779119_38779257_38779442_38781516
transcript_52611.known	chr2	+	3705	3	FSM	ENSG00000152147.11	ENST00000281950.8	3705	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	4.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATTTTTTGTCTCCT	38774084	True	NA	18	True	AATAAA	-19	NA	38778209	38785002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38778282_38778971_38779119_38781516
transcript_52613.known	chr2	-	4885	24	FSM	ENSG00000163214.21	ENST00000457308.6	4885	24	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_20	17.4168290950962	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-38872732	True	NA	-5	True	ATTAAA	-17	NA	38875934	38797728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38798443_38802714_38802916_38806558_38806694_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_52614.known	chr2	+	706	5	FSM	ENSG00000188010.16	ENST00000644631.4	727	5	21	0	6	0	multi-exon	FALSE	canonical	3	91	junction_1	12.6293309403151	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTCTGCTTATTATAAT	38874621	True	NA	8	True	AATAAA	-14	NA	38875996	38882709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38876111_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_52616.nnic	chr2	+	712	5	NNC	ENSG00000188010.16	novel	750	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	47.3312792981555	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	38874639	True	NA	2	True	AATAAA	-16	NA	38876014	38882647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_38876197_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_52619.known	chr2	-	1056	1	FSM	ENSG00000269210.2	ENST00000601251.2	1056	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCTATATAATTAATCT	-38960323	False	NA	-21	True	AATAAA	-30	NA	38960342	38959286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38959300_38960300
transcript_52620.known	chr2	+	648	5	FSM	ENSG00000188010.16	ENST00000409665.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.8107893545922	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	38874635	True	NA	2	True	AATAAA	-16	NA	38876010	38882647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38876111_38880178_38880230_38880581_38880707_38881441_38881579_38882412
transcript_52621.known	chr2	+	750	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.2072992843794	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	38874615	True	NA	1	True	AATAAA	-15	NA	38875990	38882646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_52622.known	chr2	+	594	4	FSM	ENSG00000214694.12	ENST00000433605.2	594	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTTTCATTTAACAAT	38960421	True	NA	NA	False	NA	NA	NA	38960504	38973253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38960640_38966005_38966146_38971869_38971945_38973009
transcript_52623.known	chr2	+	3990	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_5	29.9426117765301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-9	True	AATAAA	-8	NA	39437226	39602628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
transcript_52624.known	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	49	junction_3	22.2311093340441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	39435628	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
transcript_52625.nic	chr2	+	1375	4	NIC	ENSG00000152154.11	novel	569	3	NA	NA	198	0	intron_retention	FALSE	canonical	3	10	junction_1	15.9234278833282	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	39665153	False	NA	19	True	ATTAAA	-19	NA	39665179	39717963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_39665349_39704080_39704195_39707048_39707187_39717009
transcript_52628.known	chr2	-	2089	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	74.0541018445299	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-39774928	True	NA	-2	True	ATTAAA	-19	NA	39779267	39736306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_52629.nic	chr2	-	2113	11	NIC	ENSG00000138050.15	novel	2089	11	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	88.2614865045905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	NA	False	NA	-2	True	ATTAAA	-19	NA	39779301	39736306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771514_39771641_39779113
transcript_52635.known	chr2	-	2205	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	30.9766937479705	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCTGGTTTAATGT	-39774919	True	NA	NA	False	AAAAAG	-22	NA	39779258	39736060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_52636.nic	chr2	-	1992	10	NIC	ENSG00000138050.15	novel	2089	11	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	67.6862770343105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	NA	False	NA	-2	True	ATTAAA	-19	NA	39779301	39736306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771514_39771641_39779113
transcript_52638.known	chr2	-	1561	10	FSM	ENSG00000138050.15	ENST00000530522.1	1561	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	92.968333915969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTGATGGGTACAC	-39774882	True	NA	NA	False	NA	NA	NA	39779221	39736609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769757_39770120_39771514_39771641_39779113
transcript_52650.nic	chr2	-	427	3	ISM	ENSG00000138050.15	ENST00000403537.3	961	4	-62	1114	-34	0	5prime_fragment	FALSE	canonical	3	182	junction_1	48.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAACTTTCTCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	39779301	39770016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_39770120_39771504_39771641_39779113
transcript_52654.known	chr2	+	5546	23	FSM	ENSG00000143924.19	ENST00000318522.10	5546	23	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	112.662673939391	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	42155661	True	NA	25	True	AATAAA	-27	NA	42169352	42332548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120_42261295_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_52655.known	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_3	105.620292834774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	42155661	True	NA	14	True	AAGAAA	-24	NA	42169352	42330744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_52657.known	chr2	+	962	4	FSM	ENSG00000143924.19	ENST00000409040.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	160.968595971043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTTATAAACAATCT	42155689	True	NA	NA	False	NA	NA	NA	42169380	42261513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120
transcript_52659.nic	chr2	+	606	3	ISM	ENSG00000143924.19	ENST00000409040.1	962	4	-37	4883	-9	-4883	5prime_fragment	FALSE	canonical	3	646	junction_1	41	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCATTTATGAAAGGGG	42155652	True	NA	2	True	AAGAAA	-23	NA	42169343	42256630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_42169637_42245504_42245688_42256500
transcript_52661.known	chr2	-	895	3	FSM	ENSG00000115944.15	ENST00000464443.5	895	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	965	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATGGAAAGAACACAGAAG	-42351111	True	NA	NA	False	NA	NA	NA	42361192	42350851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_42351360_42353211_42353344_42360937
transcript_52663.nic	chr2	+	1657	14	NIC	ENSG00000057935.14	novel	5484	17	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	401.790681175273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTTTATTTGGTTTAT	42567749	True	NA	25	True	AATAAA	-17	NA	42568181	42709211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_42568227_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_52665.nic	chr2	+	1753	14	ISM	ENSG00000057935.14	ENST00000406652.5	5484	17	38	47736	-28	0	5prime_fragment	FALSE	canonical	3	112	junction_1	402.559915052531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTTTATTTGGTTTAT	NA	False	NA	25	True	AATAAA	-17	NA	42568082	42709211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_42568227_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707902_42708055_42708873
transcript_52668.known	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_11	251.982741026341	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	42568453	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_52670.known	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_12	400.541940567834	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42558615	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
transcript_52677.known	chr2	-	1256	10	FSM	ENSG00000162882.15	ENST00000294973.11	1256	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-42792222	True	NA	-1	True	AATAAA	-19	NA	42792583	42767088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_52685.known	chr2	-	6091	38	FSM	ENSG00000115970.19	ENST00000405975.7	6091	38	0	0	0	0	multi-exon	TRUE	canonical	2	48	junction_31	11.1214820522588	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	-43593414	True	NA	-14	True	CATAAA	-19	NA	43596038	43230850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_52688.known	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	15.3918719531518	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	43773375	True	NA	1	True	AATAAA	-13	NA	43774081	43809997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_52689.known	chr2	+	1399	13	FSM	ENSG00000138036.18	ENST00000260605.12	1399	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	12.9644278272853	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTAAGTGGTATATAC	43773332	True	NA	14	True	AATAAA	-26	NA	43774038	43810010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_52691.nic	chr2	+	1347	12	ISM	ENSG00000138036.18	ENST00000605786.5	1346	13	-79	4536	-36	-94	5prime_fragment	FALSE	canonical	3	23	junction_6	15.8817947650345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCATCCCACCACCCAG	43773296	True	NA	-86	True	AATAAA	-35	NA	43774002	43805461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153
transcript_52698.known	chr2	+	2903	6	FSM	ENSG00000138036.18	ENST00000398823.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.2720993655874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCATTTTATATTATC	43773357	True	NA	NA	False	AATAAA	-22	NA	43774063	43795183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43792675
transcript_52699.known	chr2	+	1133	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	11.9431989014669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	43773342	True	NA	NA	False	AATAAA	-18	NA	43774048	43795179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
transcript_52704.known	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	494	junction_5	140.413674547745	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	44158381	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_52705.known	chr2	+	3877	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	177.078965436327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGCCTGGCTATTCT	44158383	True	NA	NA	False	AGTAAA	-35	NA	44168876	44234646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
transcript_52706.known	chr2	+	1481	3	FSM	ENSG00000138032.21	ENST00000409486.6	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAGAGA	44158383	True	NA	NA	False	NA	NA	NA	44168876	44209432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44169275_44201185_44202046_44209209
transcript_52707.known	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	45.6363174389406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-44361788	False	NA	-124	True	GATAAA	-17	NA	44361806	44320921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
transcript_52708.known	chr2	-	5212	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	51.5401567236853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTAATTTTATTT	-44357353	True	NA	-10	True	ATTAAA	-13	NA	44361494	44318765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
transcript_52711.known	chr2	-	3030	15	FSM	ENSG00000138078.16	ENST00000409272.5	3030	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	56.3925744134775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACTTTTAAACATTTT	-44361687	True	NA	-29	True	AATAAA	-23	NA	44361805	44320826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361523
transcript_52714.known	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	47.0081196561771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-44357353	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
transcript_52716.known	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	52.0866369760929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44357420	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
transcript_52717.known	chr2	-	6049	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	52.331103358311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTCTCAATGT	-44361844	False	NA	NA	False	ATTAAA	-15	NA	44361862	44317610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
transcript_52718.nnic	chr2	+	1699	12	NIC	ENSG00000143919.15	novel	1512	11	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	82.0634706988469	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	44358586	True	NA	32	True	AATAAA	-29	NA	44361933	44772592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554_44549729_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_52722.nnic	chr2	+	889	5	NIC	ENSG00000143919.15	novel	1512	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	80.8219493702051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	NA	False	NA	32	True	AATAAA	-29	NA	44704282	44772592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_44704344_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_52723.nic	chr2	+	639	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-171	9072	-13	0	5prime_fragment	FALSE	canonical	3	14	junction_3	114.182115743034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGATGAGTACCTATAT	44358586	True	NA	5	True	AATAAA	-16	NA	44361933	44392073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
transcript_52724.nic	chr2	+	705	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-171	9006	-13	66	5prime_fragment	FALSE	canonical	3	14	junction_3	114.182115743034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTCTTATACTATT	44358586	True	NA	71	True	AATAAA	-20	NA	44361933	44392139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
transcript_52725.known	chr2	+	1114	4	FSM	ENSG00000143919.15	ENST00000403853.7	1114	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	117.465834276279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGAGATGACTCT	44358616	True	NA	NA	False	AATAAA	-33	NA	44361963	44457261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44456567
transcript_52727.known	chr2	-	581	3	FSM	ENSG00000259439.3	ENST00000444871.3	582	3	0	1	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAGTCACTTAATCT	-44938875	False	NA	-2	True	AATAAA	-12	NA	44938888	44931121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44931478_44935279_44935439_44938822
transcript_52728.known	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	-44935631	False	NA	NA	False	NA	NA	NA	44935644	44923034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44923580_44935279
transcript_52729.nic	chr2	-	846	2	FSM	ENSG00000259439.3	ENST00000685287.1	881	2	34	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAGTCACTTAATCT	-44935569	True	NA	-2	True	AATAAA	-12	NA	44935769	44931121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44931478_44935279
transcript_52730.known	chr2	-	844	2	FSM	ENSG00000236502.2	ENST00000419364.2	887	2	43	0	43	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCCTTTCCAGAAGAAAA	-44941810	True	NA	1	True	AATAAA	-20	NA	44941873	44940153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44940834_44941709
transcript_52731.known	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_20	19.602232015768	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-45608035	True	NA	-1	True	AATAAA	-17	NA	45611267	45388679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
transcript_52745.known	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	176.014203972293	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612612	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_52747.nic	chr2	-	1085	7	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	176.4139702203	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612618	True	NA	NA	False	AATAAA	-15	NA	46617057	46581284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46591802_46591926_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_52758.known	chr2	-	1294	6	FSM	ENSG00000151665.13	ENST00000281382.11	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	40.2541923282532	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTATCTGGGAGGGAG	-46612602	True	NA	NA	False	NA	NA	NA	46617041	46580936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_5276.known	chr1	+	896	7	FSM	ENSG00000122406.14	ENST00000645300.1	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2478.99269977859	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	92746549	True	NA	-15	True	NA	NA	NA	92832012	92841835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92832118_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_52761.known	chr2	+	6323	5	FSM	ENSG00000119878.6	ENST00000238892.4	6323	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	27.4089401473315	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTTTTTCATATT	46611470	True	NA	NA	False	NA	NA	NA	46617214	46630176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_46617299_46618772_46618839_46619626_46619682_46623763_46623868_46624162
transcript_52769.nnic	chr2	-	776	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_4	157.697495224243	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612681	True	NA	NA	False	AATAAA	-15	NA	46617120	46581284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_52771.nnic	chr2	-	634	4	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	206.117010996721	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612631	True	NA	NA	False	AATAAA	-15	NA	46617070	46581284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46616969
transcript_52772.known	chr2	+	4766	2	FSM	ENSG00000171150.9	ENST00000394861.3	4766	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCATCTGTATTTTGTT	46697839	True	NA	NA	False	AATACA	-20	NA	46699294	46763129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_46699450_46758518
transcript_52773.known	chr2	-	821	5	FSM	ENSG00000180398.13	ENST00000409973.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	292.705910428881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGCTATTAAATAC	-46908606	True	NA	-47	True	AATGAA	-29	NA	46915810	46905270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46910779_46910874_46915722
transcript_52776.known	chr2	-	3978	4	FSM	ENSG00000180398.13	ENST00000649435.1	3978	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.212172387318	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTATTCTTGTA	-46908557	True	NA	-97	True	NA	NA	NA	46915761	46901966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905591_46907809_46907970_46909022_46909178_46915722
transcript_52783.known	chr2	-	3975	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	255	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	-46908612	True	NA	-4	True	AATAAA	-16	NA	46915816	46901873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905595_46907809_46907970_46915722
transcript_52786.known	chr2	-	665	3	FSM	ENSG00000180398.13	ENST00000477791.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	56	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAGTTCTACGTACTCA	-46908587	True	NA	NA	False	ATTAAA	-27	NA	46915791	46907528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46907970_46909022_46909178_46915722
transcript_52791.known	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	4235.12774305569	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-47099983	True	NA	-37	True	AATAAA	-4	NA	47176516	47160179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
transcript_52792.known	chr2	-	1076	6	FSM	ENSG00000143933.20	ENST00000655728.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	3719.8455129212	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	-47176206	False	76533	NA	False	NA	NA	NA	47176223	47160338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176031
transcript_52793.known	chr2	-	1294	6	FSM	ENSG00000143933.20	ENST00000656538.1	1294	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3720.24334687934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	-47099978	True	NA	-62	True	NA	NA	NA	47176511	47160204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176235
transcript_52796.known	chr2	-	1046	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACAATAAATGTAATGT	-47344661	True	NA	NA	False	AATAAA	-1	NA	47344989	47331379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
transcript_52798.known	chr2	+	200	1	FSM	ENSG00000236824.2	ENST00000418539.2	200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTCTTGCCTGGAAGA	47335256	True	NA	NA	False	NA	NA	NA	47335314	47335514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47335300_47335500
transcript_52799.known	chr2	+	1530	10	FSM	ENSG00000119888.11	ENST00000405271.5	1530	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	898.280387362981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCCACAGTAAAATC	47345099	True	NA	-1	True	ATTAAA	-1	NA	47345157	47386900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47345224_47368927_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_52801.known	chr2	+	1547	9	FSM	ENSG00000119888.11	ENST00000263735.9	1547	9	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	144.984266387771	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	47345321	True	NA	15	True	AATAAA	-16	NA	47369310	47387020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47369582_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_52810.known	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_3	231.912301432148	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	47378693	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_52811.known	chr2	+	3628	16	FSM	ENSG00000095002.15	ENST00000406134.5	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_15	504.412221193033	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGTTCCAAAGAAGCTCA	47378667	True	NA	NA	False	NA	NA	NA	47403129	47513234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47512302
transcript_52815.nic	chr2	+	1809	11	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-76	12223	13	-12221	5prime_fragment	FALSE	canonical	3	1525	junction_3	145.447722567251	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACAGAATATGAAGAAG	47378617	True	NA	NA	False	AATGAA	-15	NA	47403079	47471000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964
transcript_52821.nic	chr2	+	1937	6	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-17	65986	9	-65984	5prime_fragment	FALSE	canonical	3	1525	junction_3	149.498628756253	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTCAGTGTGGTGACAT	47378676	True	NA	NA	False	AAGAAA	-12	NA	47403138	47417237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295
transcript_52823.known	chr2	+	2219	2	FSM	ENSG00000116062.18	ENST00000607272.2	2219	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCTATGATGTTTCA	NA	False	NA	10	True	AATAAA	-29	NA	47695529	47709833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47696098_47708182
transcript_52825.known	chr2	+	4055	10	FSM	ENSG00000116062.18	ENST00000538136.1	4055	10	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_3	469.654193772817	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	47783000	True	NA	22	True	AATAAA	-12	NA	47783954	47806945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47784106_47790926_47791124_47795893_47796064_47798614_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_52826.known	chr2	+	3959	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	382.790275557946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	47764663	True	NA	-8	True	NA	NA	NA	47783150	47806915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_52828.nnic	chr2	+	906	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATTAGGTATGCAAAAG	48047180	True	NA	NA	False	ATTAAA	-21	NA	48047326	48090574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_48047765_48090106
transcript_52830.nnic	chr2	+	1806	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTATTTTGATATATT	48047180	True	NA	NA	False	AATAAA	-23	NA	48047326	48091474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_48047765_48090106
transcript_52832.known	chr2	-	555	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTATGTGGATACTG	-48440539	False	NA	NA	False	AATAAA	-36	NA	48440597	48440042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_48440000_48440600
transcript_52834.known	chr2	+	3208	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	27.5493373131652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	48440748	False	NA	26	True	AATAAA	-17	NA	48440768	48515385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_52836.known	chr2	+	3173	22	FSM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_16	15.3881009482538	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	48440745	False	NA	27	True	AATAAA	-18	NA	48440765	48515386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_5284.known	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5844	junction_6	569.066869568785	18293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	92746576	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_52843.nic	chr2	+	2149	15	ISM	ENSG00000162869.16	ENST00000281394.8	3137	21	20	23831	20	-6946	5prime_fragment	FALSE	canonical	3	108	junction_6	14.247806848775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAAGATACTGCA	48437518	True	NA	NA	False	AAAAAG	-7	NA	48440788	48491555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017
transcript_52844.nic	chr2	+	1336	11	ISM	ENSG00000162869.16	ENST00000281394.8	3137	21	20	43936	20	0	5prime_fragment	FALSE	canonical	3	108	junction_6	15.9386323127174	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	48437518	True	NA	13	True	AATAAA	-14	NA	48440788	48471450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_52848.known	chr2	-	453	4	FSM	ENSG00000228033.6	ENST00000443237.1	453	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTTTATTTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	52910020	52722676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_52722864_52726671_52726819_52897242_52897305_52909963
transcript_5285.known	chr1	+	629	6	FSM	ENSG00000122406.14	ENST00000645119.1	629	6	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	2699.49236709423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	92746593	True	NA	34	True	AATAAA	-17	NA	92832056	92841923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92840550_92840640_92841765
transcript_52853.known	chr2	-	2226	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	29.0287214094363	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-53783147	True	NA	-5	True	ATTAAA	-16	NA	53786953	53669979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
transcript_52858.known	chr2	-	1734	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	84.6174294988922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53783203	True	NA	NA	False	NA	NA	NA	53787009	53670318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
transcript_5286.known	chr1	+	271	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	7618	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGTGTTAAGCTCT	92840110	False	NA	32	True	AATAAA	-15	NA	92840524	92841921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92840640_92841765
transcript_52863.nic	chr2	-	1677	8	NIC	ENSG00000115239.24	novel	2226	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	90.7078737891421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTGTAAACATCACTT	-53783165	True	NA	NA	False	AGTAAA	-19	NA	53786971	53670297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53750782_53750942_53765376_53765586_53786820
transcript_52865.nnic	chr2	-	979	4	NNC	ENSG00000115239.24	novel	623	3	NA	NA	-29	-4324	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	106.728107304912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTGTGTCTTTA	-53783072	True	NA	0	True	NA	NA	NA	53786878	53733784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_53734338_53750782_53750942_53765376_53765586_53786820
transcript_52866.known	chr2	+	1309	3	FSM	ENSG00000143942.5	ENST00000295304.5	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	16	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTAGTCTGTCATTCAC	53765441	True	NA	21	True	CATAAA	-28	NA	53767803	53775196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53768022_53771906_53771943_53774141
transcript_52871.known	chr2	+	2446	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	104.469694934767	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	53779770	True	NA	4	True	AATAAA	-14	NA	53787043	53818796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_52876.known	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	129.508043508244	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	53779806	True	NA	27	True	AATAAA	-37	NA	53787079	53818819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_52884.nic	chr2	+	710	5	ISM	ENSG00000068912.15	ENST00000690769.1	2759	8	-30	5737	-18	1544	5prime_fragment	FALSE	canonical	3	330	junction_4	21.6491916708223	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTCTACCCAGTGAT	53786980	False	NA	NA	False	AAAAAG	-1	NA	53786990	53797795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731
transcript_52886.known	chr2	+	1262	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	21.2661703181367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	53970059	True	NA	NA	False	CATAAA	-26	NA	53971112	54305300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
transcript_5289.known	chr1	+	4046	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.157910144091	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066732	True	NA	36	True	ATTAAA	-39	NA	93079234	93139079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_52890.known	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	6.18241233033047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	54115452	False	NA	NA	False	CATAAA	-26	NA	54115503	54305300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
transcript_52891.known	chr2	+	713	3	FSM	ENSG00000170634.13	ENST00000606082.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	33.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATGCTTCCCAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	53970837	53975376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53971322_53973712_53973811_53975245
transcript_52892.nic	chr2	+	293	2	ISM	ENSG00000170634.13	ENST00000606082.5	713	3	239	1616	-31	-1616	5prime_fragment	FALSE	canonical	3	74	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	53970023	True	NA	12	True	AATAAA	-18	NA	53971076	53973760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_53971322_53973712
transcript_52893.nic	chr2	+	906	4	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-54	46070	-54	-12966	5prime_fragment	FALSE	canonical	3	374	junction_1	47.3943268991366	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAGAAGAAATCTGCCA	54548393	True	NA	NA	False	NA	NA	NA	54558339	54616238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206
transcript_52895.nic	chr2	-	1655	7	NIC	ENSG00000115310.19	novel	2333	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	418.42897313111	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55049669	False	NA	-4	True	AATAAA	-17	NA	55049679	54972188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_52896.nnic	chr2	-	1668	7	NIC	ENSG00000115310.19	novel	4161	9	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	425.429456223029	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55038648	True	NA	-4	True	AATAAA	-17	NA	55050562	54972188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55050427
transcript_52897.nic	chr2	-	1048	7	NIC	ENSG00000115310.19	novel	1898	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	418.42897313111	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCAGTTTGTGCAC	-55049669	False	NA	22	True	NA	NA	NA	55049679	54972795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_52904.known	chr2	+	705	6	FSM	ENSG00000143947.15	ENST00000402285.7	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	6678.41612959241	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	55231870	False	NA	7	True	NA	NA	NA	55231902	55235588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55232109_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_52906.known	chr2	+	785	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	0	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_3	4356.5800072993	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	55014735	True	NA	10	True	AATATA	-2	NA	55232687	55235853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_52911.nic	chr2	-	2639	17	NIC	ENSG00000085760.15	novel	2536	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	69.3403911421763	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	-55266679	True	NA	-21	True	ATTAAA	-16	NA	55269222	55236620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55266380_55266519_55267568_55267636_55268577_55268740_55269168
transcript_52919.known	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_15	32.4293419949006	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-55266688	True	NA	5	True	ATTAAA	-42	NA	55269231	55236594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_52920.nnic	chr2	-	2476	16	NNC	ENSG00000085760.15	novel	2536	16	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	57.3203861350102	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	-55266726	True	NA	-21	True	ATTAAA	-16	NA	55269269	55236620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268649_55268740_55269168
transcript_52928.known	chr2	-	2386	15	FSM	ENSG00000085760.15	ENST00000403721.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	57.8775977950935	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-55266700	True	NA	5	True	ATTAAA	-42	NA	55269243	55236594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55269168
transcript_52938.nic	chr2	-	3349	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	0	-48	0	intron_retention	TRUE	canonical	3	37	junction_4	7.55557639719681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATAAGAAACAATTGGAG	-55417297	False	NA	48	True	AATAAA	-32	NA	55419943	55334335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_52941.nic	chr2	-	2288	13	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-37	5152	5	-2772	intron_retention	FALSE	canonical	3	37	junction_2	6.69732533677935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAAAGGCTCAGTAA	-55417227	True	NA	NA	False	NA	NA	NA	55419873	55339487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_52943.known	chr2	-	1270	2	FSM	ENSG00000115355.18	ENST00000642784.1	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTGATGAGATG	-55417015	False	NA	NA	False	AGTAAA	-20	NA	55419661	55418291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55418917_55419016
transcript_52945.known	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	17.4100864762675	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	55516935	True	NA	15	True	AATAAA	-21	NA	55519717	55545079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
transcript_52954.known	chr2	+	759	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	14.0769314838142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	55516948	True	NA	NA	False	AATATA	-7	NA	55519730	55535914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
transcript_52957.known	chr2	+	1575	8	FSM	ENSG00000163001.12	ENST00000406691.7	1575	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	69.4814613360122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTTGACAATTATG	55516863	True	NA	NA	False	AAGAAA	-13	NA	55519645	55539543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55538764
transcript_52959.known	chr2	-	5506	17	FSM	ENSG00000275052.5	ENST00000616407.2	5506	17	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_15	84.773572496091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611202	True	NA	-1	True	AATAAA	-18	NA	55617622	55547291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_52961.known	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_14	68.9110215342139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	-55611188	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_52964.known	chr2	-	5243	15	FSM	ENSG00000275052.5	ENST00000611717.4	5243	15	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	98.4664295844124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611194	True	NA	-1	True	AATAAA	-18	NA	55617614	55547291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_52965.nnic	chr2	-	2041	3	NNC	ENSG00000275052.5	novel	2981	3	NA	NA	-189	179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	-55617657	False	NA	-4	True	ATTAAA	-21	NA	55617811	55613996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55615314_55615450_55615507_55617143
transcript_52966.nic	chr2	-	2178	2	ISM	ENSG00000275052.5	ENST00000612688.1	2981	3	1069	-179	-189	179	3prime_fragment	FALSE	canonical	3	353	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	-55617657	False	NA	-4	True	ATTAAA	-21	NA	55617811	55613996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55615507_55617143
transcript_52967.known	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-55618726	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55615507_55617143_55617979_55618065
transcript_52969.known	chr2	+	465	1	FSM	ENSG00000272606.1	ENST00000608113.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAAAGTAAGTCTGCT	55617616	True	NA	30	True	AATACA	-22	NA	55617908	55618373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55617900_55618400
transcript_52970.nnic	chr2	-	2554	29	NNC	ENSG00000138035.15	novel	3308	29	NA	NA	5	-222	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	84.236327843582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTACTTATCAAATTGA	-55689052	True	NA	NA	False	NA	NA	NA	55693837	55635315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55635579_55636311_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_52971.known	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_17	34.4977285986143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-55689059	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_52981.known	chr2	-	2708	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_10	40.7061633605673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	-55921399	True	NA	-4	True	AATAAA	-25	NA	55923782	55865966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
transcript_52984.known	chr2	-	3024	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_10	18.7072178583562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	NA	False	NA	-4	True	AATAAA	-25	NA	55924139	55865966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_52991.nic	chr2	-	1842	9	NIC	ENSG00000115380.20	novel	1809	9	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_4	49.7743345008248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGGATCTGCCATAT	-55921459	True	NA	-19	True	AATAAA	-16	NA	55923842	55866611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_52995.nic	chr2	+	1944	14	NIC	ENSG00000028116.18	novel	1870	14	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_12	78.3538476642148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046481	True	NA	8	True	AATAAA	-19	NA	58046636	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_52996.nic	chr2	+	1939	14	NIC	ENSG00000028116.18	novel	1870	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_12	77.2722077000537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046481	True	NA	8	True	AATAAA	-19	NA	58046636	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_52999.nic	chr2	+	1942	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	71.5812113790009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046591	False	NA	8	True	AATAAA	-19	NA	58046685	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_53.known	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00144_+_0_500
transcript_53000.nic	chr2	+	1828	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_12	70.3214091988775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043782	True	NA	8	True	AATAAA	-19	NA	58046794	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_53003.nic	chr2	+	1895	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	48.0745948154185	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046481	True	NA	8	True	AATAAA	-19	NA	58046636	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53005.known	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	25.844083784624	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043793	True	NA	8	True	AATAAA	-19	NA	58046805	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53008.nnic	chr2	+	1991	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	61.5541202700698	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043835	True	NA	8	True	AATAAA	-19	NA	58046847	58159871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58047129_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53019.nic	chr2	-	1756	15	NIC	ENSG00000115392.12	novel	1658	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	164.526159448451	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-58235849	True	NA	-7	True	AATAAA	-14	NA	58241378	58159246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58194228_58194274_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53020.known	chr2	-	1698	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	105.375631284653	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-58235821	True	NA	-7	True	AATAAA	-14	NA	58241350	58159246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53021.known	chr2	-	1658	14	FSM	ENSG00000115392.12	ENST00000233741.9	1658	14	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_3	45.2760108640692	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-58235796	True	NA	-7	True	AATAAA	-14	NA	58241325	58159246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53026.known	chr2	-	1576	13	FSM	ENSG00000115392.12	ENST00000403295.7	1576	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	137.320691165688	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	-58235794	True	NA	-3	True	AATAAA	-18	NA	58241323	58159242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53041.known	chr2	-	849	10	FSM	ENSG00000115392.12	ENST00000403676.5	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	150.979354324023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTCGGTGAAGAGCT	-58235773	False	NA	NA	False	NA	NA	NA	58241302	58159754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58241217
transcript_5305.known	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	171.839091796331	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	93066780	True	NA	33	True	ATTAAA	-36	NA	93079282	93139076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_53053.known	chr2	-	522	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	185.833904333951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGGTGTGCATGGA	-58235730	False	NA	-2	True	AATAAA	-16	NA	58241259	58213504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53055.known	chr2	+	338	1	FSM	ENSG00000273063.1	ENST00000608934.1	338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTAGCACTCTGTCTTC	58241303	False	NA	5	True	AATAAA	-20	NA	58241348	58241686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_58241300_58241700
transcript_53056.known	chr2	+	1182	7	FSM	ENSG00000233723.10	ENST00000422793.3	1187	7	0	5	0	0	multi-exon	FALSE	canonical	1	5	junction_2	4.03112887414927	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTGGCATCTACTT	58428164	True	NA	5	True	AATAAA	-17	NA	58428411	58931076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_53057.nnic	chr2	+	926	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	60417598	True	NA	9	True	AATAAA	-14	NA	60417731	60424691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_60417982_60419876_60420153_60424291
transcript_53059.known	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	174.837603220817	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	-60550915	False	2227	NA	False	AATATA	-18	NA	60550925	60451780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
transcript_53060.nnic	chr2	-	1323	5	NNC	ENSG00000119866.22	novel	2494	5	NA	NA	673	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	183.584279011031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	-60552726	False	NA	-7	True	AATAAA	-14	NA	60552736	60452157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60552497
transcript_53061.known	chr2	-	866	4	FSM	ENSG00000119866.22	ENST00000643222.1	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	19.6185852927496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATGAGTGATGCCCTG	-60550897	False	2227	NA	False	NA	NA	NA	60550907	60452313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60452667_60462281_60462425_60545970_60546301_60550867
transcript_53063.known	chr2	+	7348	22	FSM	ENSG00000115421.13	ENST00000238714.8	7348	22	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	18.3795953113643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATTGAGTGATGTT	60754300	True	NA	NA	False	AATAAA	-17	NA	60756267	60802086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_53065.nic	chr2	+	3604	22	NIC	ENSG00000115421.13	novel	7348	22	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	30.4218265123032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCTCCTTAGTCTA	60754280	True	NA	19	True	TTTAAA	-6	NA	60756247	60798468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_60756350_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_53069.known	chr2	+	11108	10	FSM	ENSG00000162924.15	ENST00000394479.4	11108	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	2.3094010767585	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGAAATTTTGTTGCT	60880641	True	NA	18	True	AATAAA	-19	NA	60881573	60931612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920573_60920643_60921762
transcript_53071.known	chr2	-	4025	18	FSM	ENSG00000162927.14	ENST00000316752.11	4025	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	3.40364144505634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCAAGTAAGAAAACCGG	-61018222	True	NA	NA	False	AATAAA	-18	NA	61018255	60940222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61018007
transcript_53076.known	chr2	+	4472	4	FSM	ENSG00000162928.9	ENST00000295030.6	4472	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	4.49691252107735	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	61014032	True	NA	9	True	AATAAA	-17	NA	61017719	61051990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471
transcript_53079.nnic	chr2	-	1795	3	NNC	ENSG00000162927.14	novel	1227	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61017418	False	NA	0	True	AATAAA	-16	NA	61017451	61009847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_61010889_61011764_61011906_61016838
transcript_53081.known	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61016944	True	NA	0	True	AATAAA	-16	NA	61017193	61009847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61010889_61011764_61011906_61017148
transcript_53082.nnic	chr2	-	1248	3	NNC	ENSG00000162927.14	novel	1227	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61017190	False	NA	0	True	AATAAA	-16	NA	61017223	61009847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_61010889_61011764_61011906_61017157
transcript_53084.known	chr2	+	1014	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	61014042	True	NA	15	True	AATAAA	-29	NA	61017729	61019080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61017852_61018188
transcript_53086.known	chr2	+	1533	2	FSM	ENSG00000162928.9	ENST00000444100.2	1533	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTCTTCTTTATAGTGG	61017214	False	NA	2	True	AATAAA	-16	NA	61017224	61019067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61017852_61018161
transcript_53087.known	chr2	-	1820	18	FSM	ENSG00000162927.14	ENST00000407787.5	1820	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	3.28780908528991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTGTGTTAAAT	-61016944	True	NA	NA	False	NA	NA	NA	61017193	60942224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61017148
transcript_53088.nic	chr2	+	1432	10	ISM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	35771	0	-1161	5prime_fragment	TRUE	canonical	3	50	junction_8	11.2940495640649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATAGTTGTTGTTG	61063768	True	NA	NA	False	GATAAA	-26	NA	61065870	61088509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
transcript_53092.known	chr2	+	2640	11	FSM	ENSG00000162929.14	ENST00000482513.5	2640	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	29.4319554226354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTCAAATAAATAAAATAA	61063768	True	NA	NA	False	NA	NA	NA	61065870	61089670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61066028_61068848_61068986_61069651_61069699_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
transcript_53093.nic	chr2	+	925	6	NIC	ENSG00000162929.14	novel	2640	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	31.0393298896738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGTCTCTCTCTGTTC	61063768	True	NA	NA	False	ATTAAA	-32	NA	61065870	61075173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61074982
transcript_53094.known	chr2	+	4578	22	FSM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_21	24.2799246133308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGGAAAGTCTCTTT	61063768	True	NA	7	True	AATAAA	-15	NA	61065870	61124280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_53097.nic	chr2	+	1139	6	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	49.9935995903476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	61144236	True	NA	8	True	AATAAA	-21	NA	61145100	61164828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61157861_61158013_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_53100.nnic	chr2	+	1007	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	56.966547200967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	61144217	True	NA	8	True	AATAAA	-21	NA	61145081	61164828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_53102.nic	chr2	+	850	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-7	-147	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	50.2841923470985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGTGAGCCATGTGC	61144236	True	NA	3	True	AATAAA	-23	NA	61145100	61164661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_53103.nic	chr2	+	925	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-7	-72	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	50.2841923470985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAGTTCAAGAAATTGAT	61144236	True	NA	25	True	AGTAAA	-39	NA	61145100	61164736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_53104.nic	chr2	+	1017	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	50.2841923470985	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	61144236	True	NA	8	True	AATAAA	-21	NA	61145100	61164828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_53106.known	chr2	+	879	4	FSM	ENSG00000237651.8	ENST00000426997.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.7861485458088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	61144203	True	NA	-12	True	AATAAA	-1	NA	61145067	61164808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61145197_61162841_61162956_61163051_61163233_61164353
transcript_53109.known	chr2	+	726	3	FSM	ENSG00000237651.8	ENST00000464909.2	726	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	67	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	61144243	True	NA	-11	True	AATAAA	-2	NA	61145107	61164809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61145197_61163051_61163233_61164353
transcript_53111.known	chr2	-	2532	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGGTATACCAGTGGA	-61144147	True	NA	-19	True	AATAAA	-17	NA	61144950	61141591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61143946_61144772
transcript_53113.known	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_66	143.333437421167	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-61471056	False	NA	-11	True	ATTAAA	-21	NA	61471087	61187462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
transcript_53124.known	chr2	+	6574	6	FSM	ENSG00000173209.23	ENST00000394457.7	6574	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	73.3468472396735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCAGTGGTCTCAA	61174374	True	NA	8	True	AATAAA	-22	NA	61177528	61191203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_53129.known	chr2	+	1971	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	49.3178466683208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	61178657	False	NA	109	True	NA	NA	NA	61178667	61186912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
transcript_53132.known	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_18	187.653932183391	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-61515208	True	NA	75	True	AATGAA	-4	NA	61538356	61477848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_53133.known	chr2	-	4603	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_24	291.960539452204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	38	True	NA	NA	NA	61538741	61477688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
transcript_53137.known	chr2	-	720	3	FSM	ENSG00000082898.19	ENST00000481214.1	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCACCTCTGACACCAA	-61537219	False	NA	NA	False	AATATA	-8	NA	61537694	61526066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61526522_61533771_61533904_61537561
transcript_53138.known	chr2	-	3777	7	FSM	ENSG00000170264.13	ENST00000404929.6	3777	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	17.8208679175099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	-61852553	True	NA	2	True	AATAAA	-25	NA	61854060	61824847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61838537_61838706_61839420_61840582_61842121_61842361_61853858
transcript_53141.known	chr2	-	3579	6	FSM	ENSG00000170264.13	ENST00000456262.5	3579	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	16.6685332288117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATATGGTTTTTATAT	NA	False	NA	-4	True	AATAAA	-19	NA	61854092	61824853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840526_61842121_61842361_61853858
transcript_53142.known	chr2	-	3684	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.52050418832952	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAATATGGTTTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	61854143	61824855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
transcript_53147.known	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_12	297.415136322295	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-61858389	True	NA	2	True	NA	NA	NA	61888656	61868084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
transcript_5315.known	chr1	+	1951	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.338988774662	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	93066808	True	NA	-51	True	AAAAAG	-19	NA	93079310	93137151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_53157.known	chr2	-	2261	13	FSM	ENSG00000115484.15	ENST00000544079.2	2261	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	911.807770158942	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGCAAATCTTACTTAAA	NA	False	NA	-9	True	AATAAA	-15	NA	61888671	61868124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61885019_61885073_61888380
transcript_53168.known	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	-61858191	False	NA	-8	True	AATAAA	-19	NA	61888458	61887947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61888258_61888380
transcript_53169.known	chr2	-	1654	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGTCTTGTGCAAT	-62506141	False	NA	NA	False	AATAAA	-31	NA	62506195	62500217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
transcript_53173.known	chr2	-	4894	18	FSM	ENSG00000143951.16	ENST00000272321.12	4894	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	5.20047908360008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAAAGTTTTTGCTTC	-63588462	False	NA	-43	True	AATAAA	-19	NA	63588477	63119558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_53176.nnic	chr2	-	1118	8	NNC	ENSG00000143951.16	novel	847	8	NA	NA	66	-1010	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.3999641961486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTCTGAGTTATCC	-63588718	False	NA	0	True	ATTAAA	-19	NA	63588733	63438466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_63438624_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_53184.known	chr2	+	1296	9	FSM	ENSG00000014641.21	ENST00000233114.13	1296	9	0	0	0	0	multi-exon	FALSE	canonical	3	4528	junction_4	239.80744228443	3372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCAGACTCTGTTTCT	63563916	True	NA	16	True	AATAAA	-18	NA	63588962	63607197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_53192.known	chr2	+	1443	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	1580.43711813378	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	63589138	False	NA	13	True	AATAAA	-15	NA	63589150	63607194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_532.known	chr1	-	2641	19	FSM	ENSG00000157881.16	ENST00000378466.9	2641	19	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_4	25.7336787541584	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	NA	False	NA	-5	True	AATAGA	-14	NA	2526596	2508536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_5320.known	chr1	+	1937	14	FSM	ENSG00000143033.18	ENST00000471953.5	1937	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	230.007872260441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	93066807	True	NA	NA	False	NA	NA	NA	93079309	93137089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_53204.known	chr2	+	808	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	1862.16598615698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	63563926	True	NA	-90	True	NA	NA	NA	63588972	63607091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_53205.known	chr2	+	893	4	FSM	ENSG00000014641.21	ENST00000485781.5	893	4	0	0	0	0	multi-exon	FALSE	canonical	3	4644	junction_3	189.996491195671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTTTTTTCTAGTTC	63588561	False	NA	NA	False	NA	NA	NA	63588608	63597657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398
transcript_53206.known	chr2	+	634	2	FSM	ENSG00000014641.21	ENST00000462944.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTGTGTTATAGA	63563938	True	NA	NA	False	AATAAA	-29	NA	63588984	63590974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63590402
transcript_53214.known	chr2	+	1769	11	FSM	ENSG00000169764.16	ENST00000677841.1	1769	11	0	0	0	0	multi-exon	FALSE	canonical	1	114	junction_6	1151.70527479907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCTTCTTTGAAGAGA	63829079	True	NA	70	True	AAGAAA	-18	NA	63841035	63891402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885678_63885788_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53217.known	chr2	+	2057	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1328.40882637839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	63829012	True	NA	-95	True	NA	NA	NA	63840968	63891451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53225.known	chr2	+	2105	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_1	746.636077415742	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63829012	True	NA	14	True	AATAAA	-13	NA	63840968	63891560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53226.known	chr2	+	1699	10	FSM	ENSG00000169764.16	ENST00000678298.1	1699	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_5	1229.65151140727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAATACTTTCCTTCTT	63829070	True	NA	62	True	AATAGA	-41	NA	63841026	63891394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885770_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53228.known	chr2	+	1955	10	FSM	ENSG00000169764.16	ENST00000445915.6	1955	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1109.42928270951	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTACACTGGTACTT	63842306	False	NA	15	True	AATAAA	-14	NA	63842324	63891561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63842438_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53244.known	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	594.395512004724	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63798289	True	NA	14	True	AATAAA	-13	NA	63841895	63891560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53246.nic	chr2	+	1419	4	FSM	ENSG00000225889.10	ENST00000687330.1	1447	4	22	6	-3	0	multi-exon	FALSE	canonical	2	23	junction_3	2.05480466765633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	64227924	True	NA	9	True	ATTAAA	-15	NA	64228397	64252853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64228523_64229496_64229641_64251118_64251835_64252419
transcript_53247.known	chr2	+	1555	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	27	0	1	0	multi-exon	FALSE	canonical	2	22	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	64227943	True	NA	15	True	ATTAAA	-21	NA	64228416	64252859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
transcript_53248.nnic	chr2	+	1538	4	FSM	ENSG00000225889.10	ENST00000691049.1	1547	4	5	4	-3	2	multi-exon	FALSE	canonical	2	12	junction_3	6.94422221866655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	64227924	True	NA	8	True	ATTAAA	-17	NA	64228397	64257606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64257202
transcript_53250.known	chr2	+	1477	4	FSM	ENSG00000225889.10	ENST00000675635.2	1506	4	2	27	1	0	multi-exon	FALSE	canonical	0	0	junction_1	12.1928941054479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAAGCTTTATTGCTC	64227952	True	NA	-12	True	NA	NA	NA	64228425	64252832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64228630_64229496_64229641_64251118_64251835_64252419
transcript_53253.nnic	chr2	+	1183	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2558	6189	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	19.4307888557196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATCTCCTGGGTTGTG	64248080	True	NA	8	True	ACTAAA	-24	NA	64252792	64263799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_53258.nnic	chr2	+	773	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2558	2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	64248080	True	NA	8	True	ATTAAA	-17	NA	64252792	64257606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254979_64255082_64257186
transcript_53260.nnic	chr2	-	1355	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGGTGCATGTGTGTT	-64255003	True	NA	-3	True	NA	NA	NA	64255406	64209302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53262.nnic	chr2	-	917	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAC	-64255003	True	NA	NA	False	AAAAAG	-43	NA	64255406	64209740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53264.nnic	chr2	-	860	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAGA	-64255003	True	NA	NA	False	AAAAAG	-31	NA	64255406	64209797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53266.known	chr2	-	3716	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	22.2785397486759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTTTTCTAAGTTA	-64137685	True	NA	NA	False	AATAAA	-25	NA	64144420	64092651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
transcript_53267.known	chr2	+	548	5	FSM	ENSG00000119862.13	ENST00000420552.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.2373257084086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGCTTGGCTGATTTA	64452606	True	NA	NA	False	CATAAA	-22	NA	64454520	64458412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456267_64456466_64458284
transcript_53268.known	chr2	+	3856	5	FSM	ENSG00000119862.13	ENST00000238875.10	3856	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8.8423695919137	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCAGTTTATAACAT	64453589	True	NA	12	True	AATAAA	-17	NA	64454161	64461381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456287_64456466_64458284
transcript_53272.known	chr2	+	4113	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	40.8124285112716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	64524304	64592997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
transcript_53273.known	chr2	+	4040	9	FSM	ENSG00000119844.16	ENST00000238856.8	4040	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	12.5243512806053	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	64524304	64593005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591884
transcript_53280.known	chr2	-	5549	2	FSM	ENSG00000179833.4	ENST00000313349.3	5549	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCATGCTTGCAGTTT	-64653556	True	NA	-7	True	AATAAA	-15	NA	64653913	64631620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_64636876_64653619
transcript_53285.nnic	chr2	-	671	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-10	2	-10	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	-65055320	True	NA	-3	True	GATAAA	-17	NA	65056205	65047891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_53286.nnic	chr2	-	703	3	NNC	ENSG00000237638.3	novel	663	3	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	-65055320	True	NA	-3	True	GATAAA	-17	NA	65056205	65047891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_65048213_65055529_65055621_65055914
transcript_53287.known	chr2	-	608	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	0	5	0	multi-exon	FALSE	canonical	3	27	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	-65055278	True	NA	35	True	AATAGA	-3	NA	65056163	65047853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65048213_65055914
transcript_53291.known	chr2	-	2448	6	FSM	ENSG00000138069.18	ENST00000409784.8	2448	6	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_5	104.763352370951	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGGCGTGCTTGGTGGA	-65116451	True	NA	NA	False	AATAAA	-20	NA	65130106	65086853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65097970_65098067_65104733_65104807_65129892
transcript_53301.known	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	620.845139708768	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116449	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
transcript_53308.known	chr2	-	2254	4	FSM	ENSG00000138069.18	ENST00000409892.5	2254	4	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	628.802565728438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGGCGTGCTTGGTGG	-65116450	True	NA	NA	False	AATAAA	-19	NA	65130105	65086854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65088938_65089071_65104733_65104807_65129892
transcript_53309.known	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	633.230342503158	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116446	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
transcript_53312.known	chr2	+	5803	7	FSM	ENSG00000011523.14	ENST00000377990.7	5803	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	18.3734409769464	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	65053787	True	NA	7	True	AATAAA	-16	NA	65056415	65087004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_53314.known	chr2	+	3783	9	FSM	ENSG00000138071.15	ENST00000260641.10	3783	9	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_6	50.6155855443756	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTGTCATTTCTT	65208944	True	NA	22	True	AATAAA	-22	NA	65227830	65271253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_53319.known	chr2	+	2685	10	FSM	ENSG00000138071.15	ENST00000377982.8	2685	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	309.8639287187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTAATTACAAAATACAAG	65208950	True	NA	NA	False	AATAAA	-15	NA	65227836	65270146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65227958_65239851_65239963_65242048_65242064_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_53320.nnic	chr2	+	516	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64361	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATATTTTGGAGTGTTT	65558842	True	NA	NA	False	AATAAA	-20	NA	65558910	65628433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_65559085_65562377_65562449_65628162
transcript_53326.known	chr2	-	571	5	FSM	ENSG00000236780.7	ENST00000414404.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.20483682299543	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACATTGTAATAATTGA	-67215264	True	NA	60	True	TTTAAA	-25	NA	67215277	67175422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67215227
transcript_53329.known	chr2	+	4948	6	FSM	ENSG00000143971.9	ENST00000272342.6	4948	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	25.5076459125494	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	67394895	True	NA	NA	False	NA	NA	NA	67397332	67412089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
transcript_5333.known	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	173.542181871984	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066732	True	NA	36	True	ATTAAA	-39	NA	93079234	93139079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_53330.known	chr2	+	2946	6	FSM	ENSG00000143971.9	ENST00000644028.1	2946	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.9713458036286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	67394886	True	NA	NA	False	NA	NA	NA	67397323	67412089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67405235_67405336_67409910
transcript_53332.nnic	chr2	-	1261	6	NIC	ENSG00000197223.12	novel	1379	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	231.768850366049	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTGACCTGTGTATTT	-68055064	True	NA	-9	True	AATAAA	-15	NA	68063013	68042208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68053060_68053138_68062944
transcript_53333.known	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	241.439019216033	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-68055060	True	NA	NA	False	NA	NA	NA	68063009	68042676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
transcript_53335.known	chr2	-	2233	5	FSM	ENSG00000197223.12	ENST00000355848.7	2233	5	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_4	154.837616553601	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	-68055034	True	NA	NA	False	TTTAAA	-35	NA	68062983	68041129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062944
transcript_53336.known	chr2	-	2241	5	FSM	ENSG00000197223.12	ENST00000410067.8	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	107.749709976408	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	-68055055	True	NA	NA	False	TTTAAA	-35	NA	68063004	68041129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062957
transcript_53340.known	chr2	-	842	4	FSM	ENSG00000197223.12	ENST00000485709.1	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	166.097026530345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCAAAATAATTCTGTGG	-68055045	True	NA	57	True	AAAAAG	-25	NA	68062994	68042831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046411_68047172_68047320_68062944
transcript_53344.nic	chr2	-	1821	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-60	830	-38	-830	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTCCCTGAAGTTC	-68154974	True	NA	-10	True	ATTAAA	-15	NA	68157587	68130634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_53345.nic	chr2	-	1535	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-60	1116	-38	839	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGACTTTGGACTTGA	-68154974	True	NA	NA	False	NA	NA	NA	68157587	68130920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_53346.known	chr2	-	2306	15	FSM	ENSG00000273398.6	ENST00000406334.3	2306	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	60.2276717878052	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGACTTTGGACTTGA	NA	False	NA	NA	False	AATAAA	-7	NA	68261230	68131237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260_68157695_68157795_68158123_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252987_68253138_68261188
transcript_53347.known	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-68154914	True	NA	-32	True	AATAAA	-19	NA	68157527	68129804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_53350.nic	chr2	-	1680	8	ISM	ENSG00000243667.7	ENST00000492039.6	1280	10	-13	7699	-10	-830	5prime_fragment	FALSE	canonical	1	3	junction_7	48.090475954715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTCCCTGAAGTTC	-68154946	True	NA	-10	True	ATTAAA	-15	NA	68157559	68130634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157373
transcript_53351.nic	chr2	-	1395	8	ISM	ENSG00000243667.7	ENST00000492039.6	1280	10	-13	7984	-10	840	5prime_fragment	FALSE	canonical	1	3	junction_7	48.090475954715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTGGACTTGAA	-68154946	True	NA	NA	False	NA	NA	NA	68157559	68130919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157373
transcript_53353.known	chr2	-	1517	7	FSM	ENSG00000243667.7	ENST00000409164.1	1517	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	8.73212459828649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGTTAATGGTATTTC	-68154869	True	NA	NA	False	ATTAAA	-14	NA	68157482	68134089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_53357.known	chr2	+	2242	7	FSM	ENSG00000115946.8	ENST00000263657.7	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	48.5549516870662	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGCATCTCTAAAACC	68150202	True	NA	7	True	ATTAAA	-18	NA	68157887	68176238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_68158142_68158379_68158530_68161682_68161767_68162264_68162326_68162545_68162664_68173346_68173418_68174734
transcript_53367.known	chr2	+	979	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGGTTCCTGTCTCTC	68252743	True	NA	NA	False	AATAAA	-23	NA	68252869	68253848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_68252900_68253800
transcript_53368.known	chr2	-	3024	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	5.60713830755047	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTCAGTGGTC	-68239533	True	NA	-13	True	AATAAA	-15	NA	68252532	68178856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
transcript_53369.known	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	NA	False	NA	-1	True	AATAAA	-15	NA	68319949	68293009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68294027_68317156_68317308_68319221
transcript_53370.known	chr2	-	644	3	FSM	ENSG00000119865.9	ENST00000409559.7	644	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGGTTTACTCACTGT	-68319266	False	NA	NA	False	ATTAAA	-16	NA	68319400	68284170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68284485_68317156_68317308_68319221
transcript_53371.known	chr2	-	5699	4	FSM	ENSG00000204923.4	ENST00000377957.4	5699	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATTATTTTGAATTA	-68466928	True	NA	0	True	AATAAA	-17	NA	68467294	68459421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68464371_68464839_68465179_68466143_68466471_68467210
transcript_53375.nnic	chr2	-	342	2	NNC	ENSG00000204923.4	novel	5699	4	NA	NA	-23	-6817	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGCTGTCTTTATATAC	-68466951	True	NA	NA	False	AATAAA	-16	NA	68467317	68466238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_68466474_68467210
transcript_53377.known	chr2	+	3823	10	FSM	ENSG00000169621.10	ENST00000303795.9	3823	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	6.42910050732864	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTGTAATGAAAATGA	68466624	True	NA	NA	False	AATAAA	-17	NA	68467584	68580162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_68467828_68490189_68490262_68502730_68502904_68513079_68513228_68513547_68513681_68526060_68526243_68537871_68538228_68545186_68545313_68567340_68567388_68577819
transcript_53380.nnic	chr2	+	1594	2	NNC	ENSG00000163219.12	novel	582	4	NA	NA	0	-81296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTTAAATTGTTTG	68679464	True	NA	NA	False	ATTAAA	-19	NA	68679600	68693842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_68680096_68692743
transcript_53385.known	chr2	+	1126	13	FSM	ENSG00000169604.21	ENST00000482235.2	1126	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	28.8468176561798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATGATTTGTGCT	69007156	False	NA	NA	False	TATAAA	-17	NA	69013499	69135169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69134994
transcript_53386.known	chr2	+	1989	13	FSM	ENSG00000169604.21	ENST00000681816.1	1989	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	29.9021552549125	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACCACTTGCTGTTAA	69007096	False	NA	-47	True	NA	NA	NA	69013439	69146305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145327
transcript_53387.known	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	8.09663853432741	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	69007013	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
transcript_53388.nic	chr2	+	1375	9	ISM	ENSG00000169604.21	ENST00000463335.2	1449	10	13	11983	13	363	5prime_fragment	FALSE	canonical	3	96	junction_8	8.57959060794861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTATCTTCTT	69007026	True	NA	NA	False	NA	NA	NA	69013369	69091461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858
transcript_53391.known	chr2	-	8632	19	FSM	ENSG00000198380.13	ENST00000361060.5	8632	19	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	54.9452308673076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTATTAATTTACTT	-69371534	True	NA	-16	True	AATAAA	-13	NA	69387248	69319779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_53395.known	chr2	-	5906	18	FSM	ENSG00000198380.13	ENST00000674507.1	5906	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	143.768292051161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAGTCACATTGAATT	-69371474	True	NA	NA	False	NA	NA	NA	69387188	69322277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69326234_69326913_69327076_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_53398.known	chr2	-	1034	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	137.932399887682	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTTGCTTTACC	-69433827	True	NA	-23	True	AATAAA	-29	NA	69437475	69396119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
transcript_53399.known	chr2	-	898	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_5	20.457023144103	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	-69433787	True	NA	-29	True	AATAAA	-23	NA	69437435	69396125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_5340.nic	chr1	+	1512	12	ISM	ENSG00000143033.18	ENST00000370298.9	4075	15	-80	5346	-32	-10	5prime_fragment	FALSE	canonical	0	0	junction_3	181.848270237662	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAAAATCTGTAGG	93066700	True	NA	NA	False	NA	NA	NA	93079202	93133730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702
transcript_53405.known	chr2	-	1058	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	187.333629893004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTTACCTCATATG	-69437614	False	NA	-16	True	AATAAA	-36	NA	69437628	69396112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
transcript_53406.nic	chr2	-	778	7	NIC	ENSG00000169599.13	novel	898	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	145.213253144776	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	-69433803	True	NA	-29	True	AATAAA	-23	NA	69437451	69396125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_53407.known	chr2	-	598	6	FSM	ENSG00000169599.13	ENST00000471185.5	598	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	180.835394765516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGCTTTACCTCATA	-69433787	True	NA	-18	True	AATAAA	-34	NA	69437435	69396114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69396291_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_53409.known	chr2	-	567	2	FSM	ENSG00000115977.21	ENST00000495239.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTGGGGCTCAATGCGC	NA	False	NA	NA	False	NA	NA	NA	69643960	69642876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69643275_69643791
transcript_53410.known	chr2	-	453	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	-69643802	False	NA	NA	False	AAGAAA	-37	NA	69643845	69643092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69643275_69643574
transcript_53413.known	chr2	+	1414	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	22.1001508290479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTACTTTGTGT	69741916	True	NA	26	True	AATAAA	-23	NA	69741973	69825781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_53415.known	chr2	+	2651	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	10.9807280673409	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	69741877	True	NA	NA	False	ATTAAA	-35	NA	69742133	69827112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_53421.known	chr2	+	4161	14	FSM	ENSG00000087338.5	ENST00000282570.4	4161	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	30.588701166497	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGAAAGCTTTGTG	69823095	True	NA	29	True	AATAAA	-37	NA	69829659	69881384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69830153_69837546_69837671_69839456_69839554_69840941_69841040_69843148_69843262_69844130_69844197_69847542_69847628_69849651_69849743_69854822_69854961_69861277_69861348_69864899_69864976_69869718_69869865_69871744_69871833_69878908
transcript_53432.known	chr2	+	766	7	FSM	ENSG00000124380.11	ENST00000450162.6	766	7	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_6	151.316445460058	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGATAAATATTTTTAT	69880540	True	NA	6	True	AATAAA	-21	NA	69893963	69904671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253_69904426_69904511
transcript_53434.known	chr2	+	1425	6	FSM	ENSG00000124380.11	ENST00000244227.8	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	31.9724881734281	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATGTTTCATTA	69880532	True	NA	24	True	ATTAAA	-33	NA	69893955	69905236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253
transcript_53437.known	chr2	+	1339	5	FSM	ENSG00000124380.11	ENST00000409116.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	188.077610310212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCATTACATACATA	69880535	True	NA	6	True	ATTAAA	-15	NA	69893958	69905218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69904253
transcript_53451.known	chr2	+	1727	1	FSM	ENSG00000169564.7	ENST00000303577.7	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	661	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGGTGCCTTTTT	70070363	True	NA	60	True	AAAAAG	-21	NA	70087476	70089203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_70087500_70089200
transcript_53452.known	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	36	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	-70124791	True	NA	-4	True	AAAAAG	-18	NA	70125317	70124035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70124426_70125045
transcript_53459.known	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	122.470971617314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-70238442	True	NA	-22	True	ATTAAA	-22	NA	70248580	70210203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_53469.known	chr2	-	4633	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_8	128.373100346459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70248638	False	NA	1	True	AATAAA	-25	NA	70248660	70209443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_53478.known	chr2	-	2524	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	9.19473816247876	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-70190483	True	NA	NA	False	AATAAA	-24	NA	70191019	70149884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_53486.nic	chr2	-	1115	9	ISM	ENSG00000116001.17	ENST00000445587.5	1440	10	-115	3802	-65	0	5prime_fragment	FALSE	canonical	3	58	junction_5	142.107133881449	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTTGAACATTTAC	-70248703	False	NA	-3	True	AATAAA	-27	NA	70248725	70216118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_53489.known	chr2	-	904	8	FSM	ENSG00000116001.17	ENST00000477044.6	904	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	186.769092404367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	-70238473	True	NA	-3	True	AATAAA	-15	NA	70248611	70224423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70224630_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_53491.nic	chr2	-	899	7	ISM	ENSG00000116001.17	ENST00000416149.6	821	8	-271	7752	-65	0	5prime_fragment	FALSE	canonical	3	292	junction_2	72.6194418412406	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	-70248703	False	NA	-3	True	AATAAA	-15	NA	70248725	70224423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_53492.nic	chr2	-	866	6	ISM	ENSG00000116001.17	ENST00000445587.5	1440	10	-115	12107	-65	0	5prime_fragment	FALSE	canonical	3	58	junction_2	164.116300226394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	-70248703	False	NA	-3	True	AATAAA	-15	NA	70248725	70224423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_53496.known	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	22.0581050863396	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	70250803	True	NA	16	True	AATAAA	-15	NA	70258136	70281185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
transcript_53501.nic	chr2	+	654	3	ISM	ENSG00000116005.12	ENST00000264441.9	2959	6	-71	17644	-59	-13625	5prime_fragment	FALSE	canonical	3	276	junction_1	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTTCTTGTAAGCAT	70250744	True	NA	NA	False	ATTAAA	-19	NA	70258077	70261459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_70258277_70259359_70259567_70261211
transcript_53502.known	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	2135.76699727912	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-70249324	True	NA	-3	True	ATTAAA	-38	NA	70293740	70281361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
transcript_53504.known	chr2	-	566	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	4291	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCCTTCTGTCCATC	-70249324	True	NA	-8	True	ATTAAA	-33	NA	70293740	70281366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70288067_70288193_70293617
transcript_53506.known	chr2	-	393	3	FSM	ENSG00000143977.14	ENST00000488400.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_1	80.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGCAGTTACTCAGCT	-70249314	True	NA	NA	False	NA	NA	NA	70293730	70287935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70288193_70289349_70289373_70293617
transcript_53507.known	chr2	-	527	5	FSM	ENSG00000143977.14	ENST00000454893.1	527	5	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_2	2158.96786682896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	-70249295	True	NA	-77	True	AATAAA	-17	NA	70293711	70281506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70287264_70287372_70288067_70288193_70289349_70289373_70293617
transcript_53515.known	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_2	963.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-70278692	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301603
transcript_53516.known	chr2	-	518	3	FSM	ENSG00000035141.8	ENST00000438759.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	963.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGGGAGTAAGGAG	-70278619	True	NA	-98	True	NA	NA	NA	70301994	70297425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301669
transcript_53517.known	chr2	-	2398	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	930.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-70278681	True	NA	-3	True	AATAAA	-22	NA	70302056	70295975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70301604_70301924
transcript_5352.known	chr1	+	885	9	FSM	ENSG00000143033.18	ENST00000494963.5	885	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	263.866413882101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTATATGCTCTGTCT	93066793	True	NA	NA	False	TATAAA	-34	NA	93079295	93119338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_53521.known	chr2	-	1810	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_2	18.5	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCTTCTTTCCTTA	-70278715	True	NA	-2	True	AATAAA	-23	NA	70302090	70295974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301924
transcript_53523.known	chr2	-	9290	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_13	23.2828024277338	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCCCCATCTCTG	-70759831	True	NA	-3	True	AGTAAA	-22	NA	70768200	70656783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_53525.known	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_10	21.704294249961	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	-70759843	True	NA	-24	True	AATAAA	-16	NA	70768212	70675092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_53530.nic	chr2	+	1201	10	NIC	ENSG00000124357.13	novel	1801	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	73.6987528581014	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	NA	False	NA	14	True	AATAAA	-22	NA	71068274	71078641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_71068337_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_53531.known	chr2	+	2371	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.5910360915398	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTCTACTCCCCTC	71066590	True	NA	NA	False	AATAAA	-15	NA	71068647	71079808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_53533.known	chr2	+	2343	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	79.9277017059793	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTGTCTACTCCC	71066530	True	NA	NA	False	AATAAA	-12	NA	71068587	71079805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_5354.nic	chr1	+	1994	8	ISM	ENSG00000143033.18	ENST00000471953.5	1937	14	-107	16815	-32	0	5prime_fragment	FALSE	canonical	0	0	junction_3	226.646987941285	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGCGAAACTCTGT	93066700	True	NA	NA	False	NA	NA	NA	93079202	93120274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_53541.known	chr2	+	878	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.4392633877203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	71066534	True	NA	-42	True	NA	NA	NA	71068591	71078585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_53545.known	chr2	-	3365	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.8840987267251	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-70993329	True	NA	NA	False	AATAAA	-16	NA	70994873	70985941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
transcript_53548.known	chr2	+	1221	10	FSM	ENSG00000124357.13	ENST00000443938.6	1221	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	73.8884711767641	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	71066561	True	NA	14	True	AATAAA	-22	NA	71068618	71078641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077569_71077637_71078317
transcript_53553.nnic	chr2	-	1406	4	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-13	0	intron_retention	FALSE	canonical	2	17	junction_1	20.5101600838869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-71127666	True	NA	-9	True	AATAAA	-15	NA	71130252	71109686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71110762_71110859_71124205_71124544_71129716
transcript_5356.known	chr1	+	760	6	FSM	ENSG00000143033.18	ENST00000473430.5	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	244.488854551695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGGACCTTTCTGT	93066780	True	NA	NA	False	NA	NA	NA	93079282	93119401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_53560.nic	chr2	-	1138	3	NIC	ENSG00000124370.11	novel	499	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_1	27	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAATTGAATGTAATG	-71127653	True	NA	-6	True	AATAAA	-18	NA	71130239	71109683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124367_71124544_71129716
transcript_53561.nic	chr2	-	715	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	47.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAATTGAATGTAATG	-71127693	True	NA	-6	True	AATAAA	-18	NA	71130279	71109683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124367_71124544_71130179
transcript_53562.nic	chr2	-	1461	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-164	0	intron_retention	FALSE	canonical	3	61	junction_2	42.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-71130372	False	NA	-9	True	AATAAA	-15	NA	71130403	71109686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124205_71124544_71129716
transcript_53563.known	chr2	-	824	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	22	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-71127643	True	NA	-9	True	AATAAA	-15	NA	71130229	71109686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_71110123_71124205_71124544_71130179
transcript_53564.nic	chr2	-	1375	3	NIC	ENSG00000124370.11	novel	499	3	NA	NA	-201	4	intron_retention	FALSE	canonical	3	61	junction_2	42.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGTATATTATTTAG	-71130409	False	NA	91	True	ATTAAA	-22	NA	71130440	71109809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124205_71124544_71129716
transcript_53569.known	chr2	+	2164	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_7	19.3277003288027	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	71125623	True	NA	16	True	AATAAA	-17	NA	71130633	71150101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
transcript_53572.nic	chr2	+	2076	10	ISM	ENSG00000124383.9	ENST00000244230.7	2164	11	-314	814	-312	0	5prime_fragment	FALSE	canonical	3	298	junction_7	16.5536911701899	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAAGGAAAAAGAAATATC	71129876	True	NA	-19	True	TATAAA	-40	NA	71130319	71149287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222
transcript_53576.known	chr2	+	2068	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	12.1526746027366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	71125621	True	NA	NA	False	ATTAAA	-21	NA	71130631	71139425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
transcript_53578.known	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	18.3847763108502	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-71220458	True	NA	-15	True	AATAAA	-13	NA	71227103	71182737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
transcript_53581.nnic	chr2	-	700	4	NNC	ENSG00000124374.9	novel	6300	4	NA	NA	-3	-5568	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	73.1710325197069	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGAGTATTTCTATTT	-71220461	True	NA	-16	True	NA	NA	NA	71227106	71188305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_71188536_71189844_71190022_71202451_71202601_71226962
transcript_53599.nnic	chr2	+	3146	9	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1197	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	176.332073089384	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71416873	True	NA	NA	False	AATAAA	-25	NA	71417024	71435058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_536.known	chr1	+	2747	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	91.3991551140138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	2586687	False	NA	19	True	AATAAA	-19	NA	2586776	2591468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_53601.nnic	chr2	+	1921	8	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1197	0	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_2	241.07819038136	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71416873	True	NA	NA	False	AATAAA	-25	NA	71417024	71435058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_53605.nnic	chr2	+	900	6	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1197	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	270.080432464109	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71416873	True	NA	NA	False	AATAAA	-25	NA	71417024	71435058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_53608.nnic	chr2	+	795	5	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1197	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	291.537626216583	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71416873	True	NA	NA	False	AATAAA	-25	NA	71417024	71435058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71431326_71431429_71433164_71433284_71434741
transcript_53609.known	chr2	+	871	5	FSM	ENSG00000075292.19	ENST00000494621.5	871	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	161.850818657182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTCTTTAATTAATAA	71273429	True	NA	NA	False	GATAAA	-21	NA	71276560	71365705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71276755_71355718_71355781_71363152_71363192_71363953_71364253_71365428
transcript_53612.nic	chr2	-	1070	8	ISM	ENSG00000144036.16	ENST00000410104.1	5795	18	26	97927	4	-59475	5prime_fragment	FALSE	canonical	3	152	junction_3	13.9970842444753	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTCTCAACTTTTG	-72818536	True	NA	NA	False	AATAAA	-21	NA	72826015	72559402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_53613.known	chr2	+	959	2	FSM	ENSG00000135638.14	ENST00000464675.2	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGATGCATTTCTGT	72923914	True	NA	NA	False	NA	NA	NA	72923987	72934239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_72924494_72933786
transcript_53614.known	chr2	-	4016	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	44.0928283827756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-73069448	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_53616.known	chr2	-	840	12	FSM	ENSG00000144040.13	ENST00000410065.5	840	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	58.655881177374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCAGCGGCCTGGGG	-73069460	True	NA	NA	False	NA	NA	NA	73071724	72945021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_72945100_72961130_72961249_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_53617.nic	chr2	-	1230	6	ISM	ENSG00000144040.13	ENST00000416579.5	895	11	-58	46266	-58	0	5prime_fragment	FALSE	canonical	3	155	junction_1	34.4185996228783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-73071773	False	NA	NA	False	NA	NA	NA	73071786	73019446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_53619.nic	chr2	-	1066	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	101.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	-73071773	False	NA	NA	False	TATAAA	-30	NA	73071786	73049085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_53620.known	chr2	-	351	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	91.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTTGCTGACTGTT	-73071649	False	NA	-4	True	AATAAA	-39	NA	73071662	73053328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73053552_73058527_73058597_73071603
transcript_53621.known	chr2	-	895	11	FSM	ENSG00000144040.13	ENST00000416579.5	895	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.5788742054522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCCTCCTGCTTTTCTT	-73069464	True	NA	NA	False	AATACA	-14	NA	73071728	72973180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_72973428_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_53622.known	chr2	+	420	2	FSM	ENSG00000272702.1	ENST00000608612.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTAAGTGTTCACT	NA	False	NA	2	True	AATAAA	-13	NA	73113017	73113630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73113207_73113399
transcript_53624.known	chr2	+	2554	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	15.3920975395385	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210275	True	NA	13	True	AATAAA	-14	NA	73214244	73227221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_53627.nic	chr2	+	2578	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	68.5121136896405	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210232	True	NA	13	True	AATAAA	-14	NA	73214201	73227221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73214363_73218860_73218970_73220069_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_53630.known	chr2	+	246	3	FSM	ENSG00000135632.12	ENST00000629411.2	246	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATAGATGTGGCCTCT	73210297	True	NA	NA	False	NA	NA	NA	73214266	73219992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73214363_73218860_73218970_73219951
transcript_53631.known	chr2	-	1090	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	13.1600721882519	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGTCCTAGAATAA	-73232247	True	NA	-4	True	AATAAA	-42	NA	73233239	73228009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
transcript_53635.known	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1402.03806761998	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_53641.known	chr2	+	1847	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	0	0	0	0	multi-exon	FALSE	canonical	3	3375	junction_1	269.770609626367	8495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	73181828	True	NA	25	True	AATAAA	-14	NA	73234307	73253005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_53659.known	chr2	+	1674	10	FSM	ENSG00000135624.17	ENST00000540468.5	1674	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1179.41354960321	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_53667.known	chr2	+	1234	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1448.38055158933	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	73181828	True	NA	24	True	AATAAA	-13	NA	73234307	73253004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_53670.nic	chr2	-	550	3	ISM	ENSG00000163013.12	ENST00000520186.1	817	4	133	810	133	-810	5prime_fragment	FALSE	canonical	2	7	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGTTAGGATATTTT	-73283006	False	NA	0	True	ATTAAA	-22	NA	73284298	73272006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_73272303_73273014_73273130_73284159
transcript_53672.known	chr2	+	12844	23	FSM	ENSG00000116127.20	ENST00000613296.6	12844	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.6126151720564	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGTAAACAATTCTTT	73385329	False	NA	56	True	AATAAA	-14	NA	73385835	73609916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73386193_73408621_73408748_73419122_73419319_73422856_73422975_73424429_73424903_73426452_73426554_73432197_73432292_73447959_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
transcript_53676.known	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	360.68401683468	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730690	True	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
transcript_53680.known	chr2	-	592	5	FSM	ENSG00000144034.16	ENST00000484969.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	350.839261628456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCGCTGGAATTACAG	-73730648	True	NA	NA	False	NA	NA	NA	73737358	73729233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_53684.known	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	157.209255452725	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-73730635	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_53685.nic	chr2	-	565	5	NIC	ENSG00000144034.16	novel	819	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	334.425159789152	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730652	True	NA	NA	False	ATTAAA	-17	NA	73737362	73729889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_53692.known	chr2	-	798	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_3	174.021710012158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGAAATTTGGTTTTT	-73730630	True	NA	-3	True	AATAAA	-19	NA	73737340	73730263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
transcript_53696.known	chr2	-	575	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	373.007037467123	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTGGTGATTTTA	-73730665	True	NA	NA	False	TTTAAA	-2	NA	73737375	73729168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_53697.known	chr2	-	1653	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	20.3834338373101	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGGTATTTTTGTG	-73776585	True	NA	-2	True	NA	NA	NA	73780157	73762183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_53700.known	chr2	+	6280	12	FSM	ENSG00000124356.17	ENST00000682848.1	6280	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	99.6770819253705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73847662_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53703.known	chr2	+	6145	11	FSM	ENSG00000124356.17	ENST00000683928.1	6145	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	104.586614822357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823292	True	NA	-1	True	AATAAA	-16	NA	73829030	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53705.known	chr2	+	6370	11	FSM	ENSG00000124356.17	ENST00000394073.6	6370	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	58.881660982007	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53707.known	chr2	+	6516	11	FSM	ENSG00000124356.17	ENST00000682784.1	6516	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	104.902049550998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823250	True	NA	-1	True	AATAAA	-16	NA	73828988	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53709.known	chr2	+	6316	11	FSM	ENSG00000124356.17	ENST00000684585.1	6316	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	100.670204132107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823228	True	NA	-1	True	AATAAA	-16	NA	73828966	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53710.known	chr2	+	6053	10	FSM	ENSG00000124356.17	ENST00000683149.1	6053	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	125.820860308968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823204	True	NA	-1	True	AATAAA	-16	NA	73828942	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53711.known	chr2	+	6207	10	FSM	ENSG00000124356.17	ENST00000683434.1	6207	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	130.158023614033	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823228	True	NA	-1	True	AATAAA	-16	NA	73828966	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847389_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53717.known	chr2	+	6261	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	96.1500884355955	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823251	True	NA	-1	True	AATAAA	-16	NA	73828989	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53718.known	chr2	+	7846	9	FSM	ENSG00000124356.17	ENST00000682683.1	7846	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	93.6001302082428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823201	True	NA	-1	True	AATAAA	-16	NA	73828939	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53720.known	chr2	+	6019	9	FSM	ENSG00000124356.17	ENST00000682851.1	6019	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	111.396182048578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823204	True	NA	-1	True	AATAAA	-16	NA	73828942	73867152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_53727.known	chr2	+	1880	12	FSM	ENSG00000124356.17	ENST00000683852.1	1880	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	130.927713321903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	73823248	True	NA	NA	False	NA	NA	NA	73828986	73873601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_53728.known	chr2	+	1501	9	FSM	ENSG00000163017.14	ENST00000345517.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.79420222769128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	73892694	True	NA	NA	False	ATTAAA	-22	NA	73893007	73919865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73893052_73901275_73901438_73902359_73902489_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_53729.known	chr2	+	1413	8	FSM	ENSG00000163017.14	ENST00000409731.7	1413	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.13141941391353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	73892653	True	NA	NA	False	ATTAAA	-22	NA	73892966	73919865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73893052_73901275_73901438_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_53732.known	chr2	+	1075	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	649.605371659509	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906412	True	NA	15	True	AATAAA	-15	NA	73926879	73958946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_53738.known	chr2	+	1029	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_3	679.272728732723	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	73906358	True	NA	28	True	AATAAA	-28	NA	73926825	73958959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_53756.known	chr2	+	880	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	764.465622183235	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	73906358	True	NA	30	True	AATAAA	-30	NA	73926825	73958961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
transcript_53762.nnic	chr2	+	755	4	NNC	ENSG00000114956.20	novel	703	4	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_2	926.975847701666	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906337	True	NA	15	True	AATAAA	-15	NA	73926804	73958946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_73927053_73946718_73946889_73958145_73958246_73958709
transcript_53763.known	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_2	455.63460018845	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906407	True	NA	15	True	AATAAA	-15	NA	73926874	73958946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
transcript_53765.nnic	chr2	+	661	4	NIC	ENSG00000114956.20	novel	1075	7	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_1	933.567470631996	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906377	True	NA	15	True	AATAAA	-15	NA	73926844	73958946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73927053_73957124_73957241_73958145_73958246_73958709
transcript_53768.nnic	chr2	+	585	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	302	junction_1	995.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906337	True	NA	15	True	AATAAA	-15	NA	73926804	73958946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73927053_73958145_73958246_73958709
transcript_53769.known	chr2	-	601	2	FSM	ENSG00000237883.3	ENST00000453103.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGGAGCCTGCACGGCC	-73981298	True	NA	NA	False	NA	NA	NA	73981441	73947641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73947936_73981134
transcript_53770.known	chr2	-	563	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	179	3	8	-3	multi-exon	TRUE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	-73981290	True	NA	NA	False	AATAAA	-16	NA	73981433	73957969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73958208_73981108
transcript_53771.known	chr2	-	419	2	FSM	ENSG00000237883.3	ENST00000439192.2	553	2	85	49	52	-49	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGCATTTAAAAAAACA	-73981218	True	NA	NA	False	AAGAAA	-9	NA	73981361	73958015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73958208_73981134
transcript_53772.known	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1556	junction_1	299.322568477554	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-74136256	True	NA	-3	True	ATTAAA	-33	NA	74147912	74135399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
transcript_53773.known	chr2	-	444	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_1	709.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGGGTCATTAGT	-74136249	True	NA	-18	True	ATTAAA	-18	NA	74147905	74135414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74135659_74145188_74145304_74147820
transcript_53774.known	chr2	+	3520	3	FSM	ENSG00000225439.4	ENST00000656407.1	3520	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCACTTTGGGGCCG	74146537	True	NA	NA	False	NA	NA	NA	74148078	74151952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74148224_74148349_74148479_74148706
transcript_53777.known	chr2	+	1804	2	FSM	ENSG00000225439.4	ENST00000423477.2	1804	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTTTGCTTATCTCTA	74146497	True	NA	50	True	NA	NA	NA	74148038	74150061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74148479_74148697
transcript_5378.known	chr1	-	3847	5	FSM	ENSG00000117500.13	ENST00000370290.7	3847	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.924563261564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTAACTGCCAGT	-93180498	False	NA	-17	True	AATAAA	-8	NA	93180516	93151857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93154889_93156299_93156484_93158814_93158886_93160128_93160227_93180053
transcript_53782.known	chr2	+	631	2	FSM	ENSG00000225439.4	ENST00000529783.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTGGCCTTCAGAAT	NA	False	NA	15	True	NA	NA	NA	74148008	74149054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74148479_74148893
transcript_53784.known	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_2	39.7290825466685	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-74168504	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_53788.known	chr2	-	493	2	FSM	ENSG00000114978.18	ENST00000494600.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGAAACACAGTATT	-74168504	True	NA	NA	False	TATAAA	-33	NA	74178879	74178007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74178282_74178660
transcript_5379.known	chr1	-	1296	5	FSM	ENSG00000117500.13	ENST00000479918.5	1296	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	128.804842688464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATGATGGATTGAATAAA	-93176101	True	NA	-40	True	TATAAA	-16	NA	93180361	93154231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93154889_93156035_93156085_93156299_93156484_93160128_93160227_93180053
transcript_53790.known	chr2	+	2463	9	FSM	ENSG00000065911.13	ENST00000489041.2	2463	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	442.59234559016	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	74181811	True	NA	NA	False	NA	NA	NA	74198612	74215525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_53797.known	chr2	+	4403	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	120.173514009484	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	74181813	True	NA	23	True	AATAAA	-27	NA	74198614	74217565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_538.known	chr1	+	2689	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	83.7365246207147	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	2586708	False	NA	14	True	AATAAA	-14	NA	2586797	2591463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_53802.known	chr2	+	1396	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	377.967995411722	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGATTTATCTAAG	74181811	True	NA	81	True	NA	NA	NA	74198612	74214741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_53804.known	chr2	+	4033	6	FSM	ENSG00000065911.13	ENST00000677377.1	4033	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	465.960341660103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACATGAATGGGAGTT	74181813	True	NA	-39	True	NA	NA	NA	74198614	74217503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_53805.known	chr2	+	1757	5	FSM	ENSG00000065911.13	ENST00000409804.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	459.929070618503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCTATGACTCC	74181808	True	NA	43	True	AATAAA	-35	NA	74198609	74215298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74205704_74205890_74211198_74211292_74211740_74211867_74214078
transcript_5381.known	chr1	-	2871	5	FSM	ENSG00000223745.8	ENST00000653362.1	2871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.7082650271388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGACTCCGTCTCCAAA	-93344967	True	NA	NA	False	NA	NA	NA	93345846	93336974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345539
transcript_53815.known	chr2	+	1147	10	FSM	ENSG00000005448.17	ENST00000348227.4	1147	10	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	81.5381452806137	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412724	True	NA	28	True	CATAAA	-17	NA	74421729	74425755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_53819.nnic	chr2	+	1146	10	NNC	ENSG00000005448.17	novel	1147	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.791815285605	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412703	True	NA	28	True	CATAAA	-17	NA	74421708	74425755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_74421795_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_5382.known	chr1	-	2599	5	FSM	ENSG00000223745.8	ENST00000655606.1	2599	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	7.15891053163818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATGG	-93344967	True	NA	NA	False	NA	NA	NA	93345846	93337062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_53820.known	chr2	+	1046	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	217.941265165017	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGGCTATGACCT	74412753	True	NA	-77	True	NA	NA	NA	74421758	74425650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_53825.nnic	chr2	+	1124	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_4	221.310726129576	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412693	True	NA	28	True	CATAAA	-17	NA	74421698	74425755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_5383.known	chr1	-	5789	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	15.121728296285	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTCAAAATAT	-93176153	True	NA	NA	False	AATAAA	-16	NA	93180413	93149741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
transcript_53831.nic	chr2	+	928	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	221.985782202374	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412720	True	NA	28	True	CATAAA	-17	NA	74421725	74425755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_53832.known	chr2	+	854	9	FSM	ENSG00000005448.17	ENST00000409791.5	854	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	287.255113096356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTCTGATTACTCA	74412723	True	NA	27	True	CATAAA	-16	NA	74421728	74425754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425639
transcript_53841.known	chr2	-	2646	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	151.733227152863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGCCTCACATCATCC	-74440167	False	5307	20	True	NA	NA	NA	74440583	74425835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
transcript_53845.known	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	108.725752497733	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	-74440215	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
transcript_53846.known	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	27.7795334615044	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-74436630	True	NA	21	True	NA	NA	NA	74441937	74425834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_53853.nnic	chr2	-	2001	11	NIC	ENSG00000114993.17	novel	2221	12	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	125.064623295319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	-74436587	True	NA	-27	True	ATTAAA	-15	NA	74441894	74425882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74426575_74427168_74427274_74427423_74427593_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_53860.known	chr2	-	820	2	FSM	ENSG00000114993.17	ENST00000484453.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCTAGTGTGCAAC	-74442003	True	NA	NA	False	NA	NA	NA	74442419	74432560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74432667_74441705
transcript_53863.known	chr2	+	989	5	FSM	ENSG00000239779.7	ENST00000428943.1	989	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	290.875402878965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGGTGACCCCTGCCT	74451522	True	NA	NA	False	NA	NA	NA	74458471	74460443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74458831_74459118_74459642_74459746_74459872_74460050_74460220
transcript_53865.known	chr2	+	597	5	FSM	ENSG00000239779.7	ENST00000464774.6	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	295.323974644796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCAAGCCCCCAGCCT	74451500	True	NA	66	True	NA	NA	NA	74458449	74460230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74459477_74459563_74459642_74459746_74459872_74460050_74460220
transcript_53867.known	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	64.9153294684699	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	74451488	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
transcript_53868.known	chr2	+	765	4	FSM	ENSG00000239779.7	ENST00000470536.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	256.70259488798	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTCTGTACCGCAGA	74451500	True	NA	NA	False	NA	NA	NA	74458449	74460617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458538_74459642_74459746_74459872_74460050_74460220
transcript_5387.known	chr1	-	1613	4	FSM	ENSG00000223745.8	ENST00000457387.2	1613	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	6.0184900284226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATAGTTCTTATTTT	-93344967	True	NA	NA	False	AAAAAG	-14	NA	93345846	93338130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93339537_93339648_93339680_93340457_93340511_93345723
transcript_53870.known	chr2	+	847	3	FSM	ENSG00000239779.7	ENST00000473467.5	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	57	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCCGGGGCAGGGGT	74451538	True	NA	NA	False	NA	NA	NA	74458487	74460432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74459642_74459746_74459872
transcript_53876.known	chr2	+	2916	13	FSM	ENSG00000115282.21	ENST00000233623.11	2916	13	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_8	27.0373969407806	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480004	True	NA	29	True	AATAAA	-18	NA	74483080	74494559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_5388.known	chr1	+	10124	3	FSM	ENSG00000117505.13	ENST00000370272.9	10124	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	16	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTTACATATGTCTTT	93336579	True	NA	NA	False	TATAAA	-15	NA	93345906	93369493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93346866_93353907_93354072_93360492
transcript_53880.known	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	87.0545805802314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-74457212	False	8184	-122	True	NA	NA	NA	74465396	74461178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
transcript_53881.known	chr2	-	520	4	FSM	ENSG00000115275.15	ENST00000414701.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	101.686883235854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAACCCAGGACTGCC	-74457209	False	8184	NA	False	NA	NA	NA	74465393	74462996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74465313
transcript_53882.known	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	7.5	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-74464496	True	NA	-2	True	AATAAA	-23	NA	74472680	74471981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74472253_74472357_74472471_74472568
transcript_53884.known	chr2	-	386	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTTCTGGAACAAGA	-74464503	True	NA	-6	True	AATAAA	-19	NA	74472687	74471985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74472253_74472568
transcript_53885.known	chr2	-	574	2	FSM	ENSG00000204822.7	ENST00000468875.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACCACAATGTTTCTGG	-74464480	True	NA	-13	True	AATAAA	-12	NA	74472664	74471992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74472471_74472568
transcript_53886.known	chr2	-	451	2	FSM	ENSG00000204822.7	ENST00000467349.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACAATGTTTCTGGA	-74464363	False	NA	-12	True	AATAAA	-13	NA	74472547	74471991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74472253_74472357
transcript_53887.known	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-74498843	False	121	0	True	AATAAA	-18	NA	74499603	74497516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74498319_74499332
transcript_53888.nnic	chr2	-	848	9	NNC	ENSG00000115289.14	novel	907	9	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	38.1083980245825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507391	False	760	-4	True	AATAAA	-16	NA	74507408	74505042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507347
transcript_53889.nic	chr2	-	872	9	NIC	ENSG00000115289.14	novel	907	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	39.0830445973698	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507425	False	NA	-4	True	AATAAA	-16	NA	74507442	74505042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_53890.known	chr2	-	907	9	FSM	ENSG00000115289.14	ENST00000233630.11	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	11.0113577727726	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74506935	True	NA	-4	True	AATAAA	-16	NA	74507695	74505042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507575
transcript_53891.known	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	7.71693076346829	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507399	False	NA	-4	True	AATAAA	-16	NA	74507416	74505042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
transcript_5390.known	chr1	-	750	3	FSM	ENSG00000117500.13	ENST00000370280.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAAGTTTGTTTTATA	-93180243	False	NA	NA	False	TATAAA	-32	NA	93180261	93156039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93156484_93160128_93160227_93180053
transcript_53903.known	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_9	85.6846997345211	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515377	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_53906.known	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_2	269.74815312751	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	-74515431	True	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_53912.known	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_2	73.6266935289097	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515368	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_53913.nnic	chr2	-	1350	11	NIC	ENSG00000115307.17	novel	1458	12	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	303.171255233737	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	NA	False	NA	-25	True	ATTAAA	-19	NA	74529783	74526651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74529131_74529283_74529361_74529500_74529579
transcript_5392.nic	chr1	-	908	3	ISM	ENSG00000117500.13	ENST00000370290.7	3847	5	87	6594	-16	-2412	5prime_fragment	FALSE	canonical	3	14	junction_1	126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTACTGCTTCCTTGT	-93176169	True	NA	NA	False	AATAAA	-21	NA	93180429	93158451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_93158886_93160128_93160227_93180053
transcript_53920.known	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	281.491030052469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	-74515356	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_53925.known	chr2	-	3689	14	FSM	ENSG00000115318.12	ENST00000264094.8	3689	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_13	63.9682798612122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGGCTGAGTATTCA	-74553805	True	NA	NA	False	AATAAA	-19	NA	74553942	74532257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321_74552647_74553875
transcript_53932.known	chr2	-	2837	10	FSM	ENSG00000115318.12	ENST00000470907.6	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_9	35.1687290952181	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAACAGTGTTAAAT	-74549649	False	NA	-3	True	AATAAA	-44	NA	74549663	74532413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368
transcript_53933.known	chr2	+	1323	9	FSM	ENSG00000115317.12	ENST00000467961.5	1323	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	59.6887761643678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTAAACTTAGGGGAG	74529752	False	NA	-69	True	NA	NA	NA	74529774	74533247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74529913_74530460_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_53936.known	chr2	+	1294	9	FSM	ENSG00000115317.12	ENST00000462909.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	58.7057013841075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATTATACCTAG	74529702	False	NA	NA	False	NA	NA	NA	74529724	74533152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74529913_74530444_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_53949.known	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	8.54280936441489	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	74529208	True	NA	3	True	ATTAAA	-19	NA	74529932	74533319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_5395.known	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	70.0027696245087	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	93434910	False	NA	27	True	AATAAA	-24	NA	93448281	93554661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
transcript_53958.nic	chr2	+	1577	7	NIC	ENSG00000115317.12	novel	1479	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	55.3516535936873	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	74529873	False	NA	NA	False	AATAAA	-32	NA	74529917	74533192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532819
transcript_53967.known	chr2	+	1461	5	FSM	ENSG00000115325.14	ENST00000480318.5	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	27.5907593226428	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGACGGCAAGGCTGAGG	74553759	True	NA	NA	False	NA	NA	NA	74554737	74557114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74554815_74555155_74555454_74555574_74555669_74555893_74556079_74556307
transcript_53971.known	chr2	+	1722	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	31.7525152109596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74553752	True	NA	24	True	ATTAAA	-20	NA	74554730	74557551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
transcript_53975.known	chr2	+	1479	7	FSM	ENSG00000115317.12	ENST00000437202.1	1479	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	78.487790982632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	74529321	False	NA	NA	False	AATAAA	-32	NA	74530045	74533192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531566_74531703_74531855_74531926_74532819
transcript_53976.known	chr2	-	2398	12	FSM	ENSG00000115318.12	ENST00000393937.6	2398	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	77.9628010470855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCCAGGAGTCAGT	-74553821	True	NA	-13	True	TATAAA	-18	NA	74553958	74533129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74550184_74550349_74552321_74552647_74553875
transcript_53977.known	chr2	-	2544	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2638350316493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	-74647994	True	NA	0	True	AATAAA	-17	NA	74648330	74557882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_53982.known	chr2	-	2531	10	FSM	ENSG00000159374.18	ENST00000536235.5	2531	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.1978958621896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCCTGTGCTTC	-74648002	True	NA	-9	True	AATAAA	-8	NA	74648338	74557891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74558875_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_53983.known	chr2	-	816	3	FSM	ENSG00000287687.2	ENST00000660620.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGAGTATAATTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	74778742	74750172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74750577_74752066_74752200_74778463
transcript_53984.known	chr2	-	1333	1	FSM	ENSG00000272711.1	ENST00000610008.1	1333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCCTCTCAGCAAAACT	-74833971	False	NA	-3	True	AATAAA	-17	NA	74833987	74832654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74832700_74834000
transcript_53986.known	chr2	+	602	5	FSM	ENSG00000115350.12	ENST00000233699.8	602	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	157.041395816517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGTGTGTTTTATAAT	74955795	False	NA	18	True	AATAAA	-18	NA	74958791	74969731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74958893_74959340_74959426_74959705_74959757_74960104_74960147_74969408
transcript_53988.known	chr2	+	1097	4	FSM	ENSG00000115350.12	ENST00000483063.2	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	17.9133717900592	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGGGTACATGTGCA	74955646	True	NA	NA	False	NA	NA	NA	74958642	74970128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74958893_74959340_74959426_74960104_74960147_74969408
transcript_53989.known	chr2	+	528	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	146.718172774276	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	74958852	True	NA	10	True	AATAAA	-10	NA	74959005	74969723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
transcript_53991.known	chr2	-	1828	4	FSM	ENSG00000115363.14	ENST00000393913.8	1828	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.35702260395516	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCATGTCCGTCTC	-75560798	True	NA	NA	False	AATAAA	-17	NA	75560939	75492317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75560679
transcript_53995.known	chr2	-	4367	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	21.0586049810998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-75709037	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
transcript_53997.known	chr2	+	1076	7	FSM	ENSG00000115364.14	ENST00000409374.5	1076	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	239.252597803149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAACCATAATAAATTCT	75635541	True	NA	NA	False	CATAAA	-40	NA	75646802	75670753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063_75655303_75670578
transcript_54.known	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00145_+_0_1000
transcript_5400.known	chr1	+	5341	14	FSM	ENSG00000137942.18	ENST00000260506.12	5341	14	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_8	36.3998179330904	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTAGTGTGTGATC	93434759	True	NA	25	True	AATAAA	-22	NA	93448130	93554659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946
transcript_54001.known	chr2	+	7825	6	FSM	ENSG00000115364.14	ENST00000393909.7	7825	6	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	44.6434765671313	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGGATTTGATTTGC	75635521	True	NA	7	True	AATAAA	-20	NA	75646782	75662206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
transcript_54005.known	chr2	+	693	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	294.663876306547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	75635532	True	NA	NA	False	AATAAA	-30	NA	75646793	75690759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
transcript_5401.nic	chr1	-	1451	6	ISM	ENSG00000137936.18	ENST00000539242.5	2114	8	2573	4	2573	0	3prime_fragment	FALSE	canonical	3	41	junction_3	6.15142259969188	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATCCAGTCTCTTT	NA	False	NA	3	True	AATACA	-14	NA	93582509	93561790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300
transcript_54010.known	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-75709021	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_75702424_75706522_75706652_75710590
transcript_54013.known	chr2	+	466	1	FSM	ENSG00000271452.1	ENST00000604219.1	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTATTTGCTCATCT	75669978	False	NA	NA	False	AATAAA	-19	NA	75669988	75670454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75670000_75670500
transcript_54017.known	chr2	+	3839	18	FSM	ENSG00000066032.19	ENST00000496558.5	3839	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	5.70800445680386	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCAAGTATGTTTTCTT	79512594	True	NA	5	True	AATAAA	-16	NA	79512999	80648780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_79513208_79651551_79651659_79744386_79744583_79858012_79858180_79869815_79869936_79874075_79874343_79909593_79909798_80393210_80393292_80419448_80419602_80544981_80545075_80545906_80546064_80555692_80555894_80574162_80574315_80581705_80581820_80589303_80589486_80604073_80604180_80608183_80608319_80647584
transcript_54022.known	chr2	-	1270	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	38.7967459975705	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGGAGGCTTATT	-84455308	True	NA	-5	True	AATAAA	-19	NA	84459280	84423527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_54024.known	chr2	-	1814	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	7.41619848709566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	-84881073	False	121	-19	True	AATAAA	-27	NA	84881084	84821665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_54026.known	chr2	-	1554	5	FSM	ENSG00000186854.11	ENST00000409133.1	1554	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.64005494464026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGAGGCTCTGTGTA	-84881139	False	NA	NA	False	NA	NA	NA	84881150	84837789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_5403.known	chr1	-	5896	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_5	80.2650124414257	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTCACATAGTTT	-93868910	True	NA	NA	False	ATTAAA	-17	NA	93879206	93866283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
transcript_54034.known	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	14371	junction_2	222.5	10930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	84763150	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_84905719_84906002_84906118_84906388
transcript_54038.known	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	2	369	junction_4	108.804105314705	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	84967657	True	NA	3	True	AATAAA	-15	NA	84971160	85059472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_54043.known	chr2	-	6138	5	FSM	ENSG00000152291.15	ENST00000398263.6	6138	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	60.8604962188118	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-85328015	True	NA	37	True	AATAAA	-20	NA	85328251	85318026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85322742_85324914_85324999_85326507_85326805_85326978_85327686_85327916
transcript_54046.known	chr2	-	6050	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	22.2311093340441	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-85318978	True	NA	37	True	AATAAA	-20	NA	85327989	85318026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
transcript_54048.known	chr2	-	2235	4	FSM	ENSG00000152291.15	ENST00000409232.7	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.1491896308371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACTCAGTAGGAACTTT	-85327788	False	NA	-4	True	AATAAA	-33	NA	85328024	85321893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85322759_85324914_85324999_85326507_85327686_85327916
transcript_54054.known	chr2	+	2332	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.6936507641996	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354301	True	NA	5	True	AATAAA	-14	NA	85354756	85391748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_54059.known	chr2	-	3141	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_4	6.99213844256534	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGTGGGGTCTGCGCC	-85353903	True	NA	NA	False	AATAAA	-21	NA	85354528	85341954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_54062.nic	chr2	-	1233	10	NIC	ENSG00000042493.16	novel	1250	10	NA	NA	20	0	intron_retention	FALSE	canonical	2	23	junction_9	236.718512839591	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTCCTGCACCACCT	-85409801	False	965	-23	True	AATAAA	-20	NA	85409812	85394766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85409765
transcript_54063.known	chr2	-	1250	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	202.912132050633	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-85410355	False	5105	-9	True	AATAAA	-34	NA	85410366	85394752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_54065.known	chr2	-	1151	10	FSM	ENSG00000042493.16	ENST00000409724.5	1151	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	243.512313679576	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGCGTCTTCCTGCCC	-85408969	True	NA	NA	False	NA	NA	NA	85414074	85394892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413983
transcript_54082.known	chr2	-	1183	10	FSM	ENSG00000042493.16	ENST00000409670.5	1183	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	243.512313679576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTCAGTGCAGAGGTG	-85408937	True	NA	-84	True	NA	NA	NA	85414042	85394827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402151_85413976
transcript_54083.known	chr2	-	1205	1	FSM	ENSG00000286532.1	ENST00000667933.1	1205	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTAGGCTGGTCAG	-85538460	True	NA	NA	False	AATAAA	-20	NA	85538666	85537461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85537500_85538700
transcript_54085.known	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	19.0194583497629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	-85559843	True	NA	-4	True	AATAAA	-16	NA	85561493	85544719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
transcript_54089.known	chr2	-	2314	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_13	17.7830449133587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGCGGGGTTCTA	-85559882	True	NA	-108	True	NA	NA	NA	85561532	85549829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
transcript_5409.known	chr1	+	3604	23	FSM	ENSG00000117528.14	ENST00000370214.9	3604	23	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	14.4360230094919	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGTCTCTTTTTTAA	94416622	True	NA	16	True	AATAAA	-18	NA	94418388	94518663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_54090.nnic	chr2	+	1793	10	NNC	ENSG00000168906.13	novel	2817	9	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_9	106.021777404223	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	85509760	True	NA	NA	False	AATAAA	-20	NA	85539164	85545280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669_85543726_85544751
transcript_54093.known	chr2	+	2817	9	FSM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_8	40.0398239256868	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	85509763	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669
transcript_54099.nic	chr2	+	3454	8	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	-3	1	-3	-1	intron_retention	FALSE	canonical	3	305	junction_5	32.392364935621	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	85509760	True	NA	NA	False	AATAAA	-20	NA	85539164	85545280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900
transcript_54107.known	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	145	junction_1	7.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	NA	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85559076_85560814_85560986_85561385
transcript_54108.known	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	-85559843	True	NA	NA	False	NA	NA	NA	85561493	85558583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85559076_85561385
transcript_5411.nnic	chr1	+	3391	22	NIC	ENSG00000117528.14	novel	3604	23	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	24.2119327414155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	94416631	True	NA	NA	False	NA	NA	NA	94418397	94518496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_94418589_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_54114.known	chr2	+	805	4	FSM	ENSG00000118640.11	ENST00000409760.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	313.485069642701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571526	True	NA	26	True	AATAAA	-19	NA	85577592	85582031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85577650_85579008_85579168_85579741_85579875_85581575
transcript_54118.known	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_2	4.5	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571519	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85577650_85579008_85579168_85581575
transcript_5412.known	chr1	+	884	9	FSM	ENSG00000117528.14	ENST00000315713.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	31.1277609217239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTACTTATTGTTT	94416712	False	NA	NA	False	AATAAA	-23	NA	94418478	94478723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94478523
transcript_54120.nnic	chr2	+	573	2	NIC	ENSG00000118640.11	novel	679	3	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571466	True	NA	26	True	AATAAA	-19	NA	85577532	85582031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_85577650_85581575
transcript_54121.known	chr2	+	664	3	FSM	ENSG00000118640.11	ENST00000432071.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGGGTAATAAAGACC	NA	False	NA	-8	True	NA	NA	NA	85561561	85581997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85561645_85579008_85579168_85581575
transcript_54123.nnic	chr2	+	1000	5	Fusion	ENSG00000168899.5_ENSG00000118640.11	novel	805	4	NA	NA	-57	0	multi-exon	FALSE	canonical	3	4	junction_2	278.477108574475	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85571462	True	NA	28	True	ATTAAA	-15	NA	85577528	85593406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85579008_85579168_85581753_85581877_85591724_85591863_85592947
transcript_54124.nnic	chr2	+	943	5	Fusion	ENSG00000168899.5_ENSG00000118640.11	novel	805	4	NA	NA	-57	0	multi-exon	FALSE	canonical	2	9	junction_2	277.667404460805	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85571462	True	NA	28	True	ATTAAA	-15	NA	85577528	85593406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85579008_85579168_85581810_85581877_85591724_85591863_85592947
transcript_54126.nnic	chr2	+	877	4	Fusion	ENSG00000168899.5_ENSG00000118640.11	novel	805	4	NA	NA	-57	0	multi-exon	FALSE	canonical	2	5	junction_2	300.15255380482	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85571462	True	NA	28	True	ATTAAA	-15	NA	85577528	85593406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85579008_85579168_85591724_85591863_85592947
transcript_54127.nnic	chr2	+	711	3	Fusion	ENSG00000168899.5_ENSG00000118640.11	novel	679	3	NA	NA	-50	0	multi-exon	FALSE	canonical	2	15	junction_1	22	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85571469	True	NA	28	True	ATTAAA	-15	NA	85577535	85593406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85591724_85591863_85592947
transcript_54128.known	chr2	+	660	3	FSM	ENSG00000168899.5	ENST00000306384.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85583943	True	NA	28	True	ATTAAA	-15	NA	85584430	85593406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85584494_85591724_85591863_85592947
transcript_54133.known	chr2	+	685	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	1633	junction_3	133.121185391357	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	85582296	True	NA	87	True	NA	NA	NA	85595744	85597708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
transcript_54134.known	chr2	+	535	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	786.163787006245	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	85582307	True	NA	-17	True	ATTAAA	-39	NA	85595755	85597604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
transcript_54138.known	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	908.18732771506	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	85582368	False	NA	-8	True	NA	NA	NA	85595816	85597613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
transcript_54139.nnic	chr2	+	494	4	NIC	ENSG00000168894.10	novel	535	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	94	junction_2	875.190011115047	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	85582273	True	NA	-17	True	ATTAAA	-39	NA	85595721	85597604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_85595850_85596518_85596650_85597103_85597179_85597444
transcript_54142.nnic	chr2	+	388	4	NNC	ENSG00000168894.10	novel	535	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_1	796.092121972493	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	85582273	True	NA	-17	True	ATTAAA	-39	NA	85595721	85597604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_85595850_85596906_85596932_85597103_85597179_85597444
transcript_5415.known	chr1	-	2298	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	7.78203058333749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACTGCACTTCTTCTC	-94541251	True	NA	53	True	AATACA	-15	NA	94541759	94529172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_54150.known	chr2	+	2034	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_13	153.714790070411	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85603791	True	NA	22	True	ATTAAA	-19	NA	85616168	85649280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
transcript_54156.known	chr2	+	2183	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	62.185877282011	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	85603808	True	NA	25	True	ATTAAA	-22	NA	85616185	85649283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_54157.known	chr2	+	1946	13	FSM	ENSG00000168883.20	ENST00000409025.5	1946	13	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_11	225.874534986916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAAATAGTCTCCTGT	85603765	True	NA	-5	True	NA	NA	NA	85616142	85649253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85648760_85648854_85649016
transcript_5416.known	chr1	-	1879	5	FSM	ENSG00000117525.14	ENST00000370207.4	1879	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.1037184369102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATTCTATCTTCCATT	-94541129	False	NA	-5	True	AATAAA	-25	NA	94541637	94529309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94530597_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_54160.known	chr2	+	2033	12	FSM	ENSG00000168883.20	ENST00000409766.7	2033	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	200.284013217264	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCCTCTTGTTTTAT	85603816	True	NA	19	True	ATTAAA	-16	NA	85616193	85649277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85647929_85648017_85648760
transcript_54170.known	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	21.0082588230322	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85591389	False	11309	0	True	ATTAAA	-17	NA	85602698	85598546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_54174.known	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	22.4629324295234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	-85591350	False	11309	-31	True	NA	NA	NA	85602659	85598577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
transcript_54177.known	chr2	-	1484	7	FSM	ENSG00000168890.14	ENST00000306353.7	1484	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	36.8631101358647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTAGCCTGTTCTGG	-85591389	False	11309	-1	True	ATTAAA	-16	NA	85602698	85598547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_5418.known	chr1	+	2381	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_5	3.68394198806504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGCAGAAATCTCT	94820137	True	NA	NA	False	AATAAA	-22	NA	94820356	94895246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_54186.nnic	chr2	-	1359	5	NNC	ENSG00000168887.11	novel	4274	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	120.852182437886	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCTCCCTTTCCATG	-85600772	True	NA	-7	True	AATAAA	-38	NA	85612081	85608283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_85609068_85609434_85609587_85611473_85611574_85611667_85611787_85611877
transcript_54189.known	chr2	-	4274	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	27.0102861065105	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-85600757	True	NA	-10	True	AATAAA	-19	NA	85612066	85605253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
transcript_54192.known	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	260.95320727841	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85602701	True	NA	22	True	ATTAAA	-19	NA	85602855	85649280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_54202.known	chr2	+	6681	24	FSM	ENSG00000132300.19	ENST00000254630.12	6681	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	152.020257828258	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGGCTCACACCTGTA	86094357	True	NA	7	True	AATAAA	-14	NA	86106234	86142157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86111112_86111159_86116529_86116599_86117054_86117160_86118920_86119045_86121478_86121595_86123700_86123763_86124994_86125083_86125454_86125516_86125794_86125881_86127160_86127306_86127940_86127992_86130647_86130738_86131077_86131107_86132317_86132425_86133177_86133257_86133345_86133437_86134291_86134378_86134838_86134988_86136520_86136563_86136981_86137141_86137468
transcript_5422.known	chr1	+	2061	14	FSM	ENSG00000143036.17	ENST00000467909.5	2061	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.42621295032258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	94820575	False	NA	2	True	AATAAA	-16	NA	94820620	94895053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94820724_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_5423.known	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3021	junction_2	173.54986475234	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	-94908475	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
transcript_54235.known	chr2	+	587	3	FSM	ENSG00000132300.19	ENST00000473829.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGCAAAATTTAGCTT	86094366	True	NA	NA	False	AATAAA	-11	NA	86106243	86108925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86106352_86108349_86108403_86108499
transcript_54236.known	chr2	+	210	4	FSM	ENSG00000132300.19	ENST00000627371.1	210	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	335.643991289713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTCAGATGAGATCTG	86094370	True	NA	NA	False	NA	NA	NA	86106247	86110993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86110977
transcript_54238.known	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	125.086602652983	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86190734	True	NA	-7	True	AATAAA	-20	NA	86195472	86143931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_54239.known	chr2	-	2627	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_10	173.333052066752	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCTTATCCCTTTT	-86195317	False	NA	-11	True	AATAAA	-16	NA	86195403	86143935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_54243.known	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	138.592929112563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	86199324	False	NA	NA	False	AATAAA	-22	NA	86199354	86212838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
transcript_54244.known	chr2	+	651	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	115.648983998996	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTGCCGATGATTT	86197421	True	NA	-37	True	NA	NA	NA	86199462	86213738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
transcript_54245.known	chr2	+	3723	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	3.2659863237109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	86197415	True	NA	15	True	AATAAA	-15	NA	86199456	86213790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
transcript_54247.nnic	chr2	+	630	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-42	-6600	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	57	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGATTATATGTTGAT	86438303	True	NA	8	True	AATAAA	-21	NA	86441328	86443287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_54248.nnic	chr2	+	1285	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-42	-5945	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	57	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTATGTGATTTGA	86438303	True	NA	15	True	AATAAA	-16	NA	86441328	86443942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_54256.known	chr2	-	3138	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.88767014308903	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCGTTTGACTG	-86561886	True	NA	1	True	AATAAA	-28	NA	86563443	86503429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
transcript_54259.known	chr2	-	1099	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	53.8580309703205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	-86561922	True	NA	0	True	AATAAA	-20	NA	86563479	86505443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
transcript_5426.known	chr1	-	1974	6	FSM	ENSG00000117519.16	ENST00000394202.8	1974	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	1246.83641268612	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGATTATTTTCTGG	-94927125	True	NA	2	True	AATAAA	-28	NA	94927223	94896948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94903121_94903189_94903402_94903525_94926837
transcript_54264.known	chr2	-	4794	6	FSM	ENSG00000172116.23	ENST00000390655.12	4794	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.35646599662505	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGGCCATTGTTAT	-86861870	False	NA	NA	False	ATTAAA	-15	NA	86861886	86838166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86842320_86844921_86844959_86846683_86846774_86852996_86853087_86858056_86858417_86861822
transcript_54265.known	chr2	-	2217	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	135.092708907624	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-87073675	True	NA	NA	False	AATAAA	-20	NA	87076429	87030674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
transcript_54267.known	chr2	+	529	2	FSM	ENSG00000222041.12	ENST00000331944.10	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	87455351	True	NA	NA	False	ATTAAA	-23	NA	87455428	87521518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_87455646_87521206
transcript_54268.known	chr2	+	772	4	FSM	ENSG00000222041.12	ENST00000414584.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	87455418	False	NA	NA	False	ATTAAA	-23	NA	87455495	87521518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_87455646_87478121_87478231_87480222_87480424_87521206
transcript_54269.known	chr2	+	2638	18	FSM	ENSG00000284879.1	ENST00000643276.1	2638	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.903641554055	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATTCAGAAATAAAATAA	87455398	False	NA	NA	False	NA	NA	NA	87455475	87739214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_87455646_87583257_87583347_87606592_87606770_87700983_87701054_87704332_87704601_87707761_87707911_87713358_87713438_87714047_87714085_87714178_87714250_87716611_87716791_87719806_87720022_87722300_87722420_87725936_87726209_87732386_87732622_87735673_87735766_87737717_87737853_87738022_87738106_87739016
transcript_54275.known	chr2	+	845	2	FSM	ENSG00000287670.1	ENST00000662935.1	845	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATCGAGACCATCCCGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88016779	88021451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88016869_88020695
transcript_54276.known	chr2	+	939	2	FSM	ENSG00000287670.1	ENST00000662952.1	939	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTATTAATAATAGATT	88016893	False	NA	NA	False	TTTAAA	-39	NA	88017016	88021359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88017292_88020695
transcript_54277.nnic	chr2	-	1748	4	NNC	ENSG00000172086.9	novel	1807	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	34.2928563989645	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-88054208	True	NA	-5	True	AATAAA	-16	NA	88055785	88027204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_88028586_88034133_88034232_88036942_88037052_88055625
transcript_54278.known	chr2	-	1807	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18241233033047	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-88054206	True	NA	-5	True	AATAAA	-16	NA	88055783	88027204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
transcript_54279.known	chr2	+	1747	3	FSM	ENSG00000225420.1	ENST00000413234.1	1747	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACATTCCATTCATTCC	88538579	False	NA	NA	False	AATAAA	-24	NA	88538719	88575610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88539255_88540064_88540180_88574513
transcript_54280.known	chr2	+	1614	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	0	2	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	88627518	False	NA	13	True	AATAAA	-14	NA	88627538	88631819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88628733_88631399
transcript_54285.known	chr2	+	1813	9	FSM	ENSG00000153574.9	ENST00000283646.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	19.0262975904404	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	88686398	True	NA	6	True	AATAAA	-15	NA	88691672	88750929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277_88729338_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_54287.nnic	chr2	+	1768	8	NIC	ENSG00000153574.9	novel	1813	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	85.7811643851102	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	88686383	True	NA	6	True	AATAAA	-15	NA	88691657	88750929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_88691984_88698483_88698545_88700008_88700065_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_5429.known	chr1	+	1418	3	FSM	ENSG00000235501.7	ENST00000659966.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAATAAAGCTTTTTAT	94926454	True	NA	-25	True	AAGAAA	-8	NA	94927360	94963240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94928403_94931871_94931986_94962978
transcript_54294.known	chr2	-	3298	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	0	0	0	multi-exon	TRUE	canonical	3	654	junction_5	98.9962850960071	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTACTTACTATCTG	-95117194	True	NA	NA	False	AATAAA	-33	NA	95121808	95085368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54296.nnic	chr2	-	1588	12	NNC	ENSG00000144029.12	novel	3298	12	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_7	231.003774431616	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	-95121798	False	NA	-20	True	AATAAA	-15	NA	95122016	95087207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108253_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54301.known	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	227.702788740059	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	-95117185	True	NA	-20	True	AATAAA	-15	NA	95121799	95087207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54302.nnic	chr2	-	1301	11	NNC	ENSG00000144029.12	novel	1359	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_6	307.263990731098	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	-95117206	True	NA	-20	True	AATAAA	-15	NA	95121820	95087207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108253_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54309.nic	chr2	-	584	4	ISM	ENSG00000144029.12	ENST00000475895.5	1672	7	-203	6207	-203	5162	5prime_fragment	FALSE	canonical	3	809	junction_3	34.1792659696229	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGAAAGGATCTGA	-95121798	False	NA	NA	False	AAAAAG	-23	NA	95122016	95109959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54313.known	chr2	+	1366	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	121.268039895102	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397393	True	NA	-24	True	NA	NA	NA	95402722	95413096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54316.nic	chr2	+	1505	9	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	143.684060963629	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397374	True	NA	-24	True	NA	NA	NA	95402703	95413096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54318.nic	chr2	+	1404	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	131.709327455482	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397349	True	NA	-24	True	NA	NA	NA	95402678	95413096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_5432.known	chr1	-	9375	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	10.077477638554	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTGTTACATATATGA	-95072068	True	NA	NA	False	AATAAA	-20	NA	95072951	94974404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
transcript_54322.known	chr2	+	4775	8	FSM	ENSG00000115042.10	ENST00000233379.9	4775	8	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	72.9607107018733	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTCTGGCTTGCTGT	95397378	True	NA	20	True	AATAAA	-30	NA	95402707	95416616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_95402873_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54346.known	chr2	-	2351	2	FSM	ENSG00000232931.6	ENST00000448494.1	2351	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCATGTTCTAATCATTG	NA	False	NA	NA	False	AATATA	-15	NA	95816215	95807117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_95807303_95814049
transcript_5435.nic	chr1	+	1460	6	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	79.489370358558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231874	True	NA	4	True	ATTAAA	-16	NA	95234173	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95237347_95237461_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_54360.nnic	chr2	+	1396	6	FSM	ENSG00000231584.9	ENST00000685578.1	1392	6	-9	5	0	0	multi-exon	FALSE	canonical	1	1	junction_2	28.6607745882766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010508	True	NA	13	True	AGTAAA	-19	NA	96010544	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019200_96019275_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54363.nnic	chr2	+	1462	6	FSM	ENSG00000231584.9	ENST00000690506.1	1467	6	0	5	0	0	multi-exon	FALSE	canonical	1	4	junction_5	27.8452868543314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010508	True	NA	13	True	AGTAAA	-19	NA	96010544	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_54364.nnic	chr2	+	1173	6	FSM	ENSG00000231584.9	ENST00000690132.1	1165	6	-10	2	0	0	multi-exon	FALSE	canonical	1	4	junction_1	30.7336948641064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010517	True	NA	13	True	AGTAAA	-19	NA	96010553	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019480_96019701_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_54367.nnic	chr2	+	1809	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	10	5	1	0	multi-exon	FALSE	canonical	3	23	junction_1	87.6045660910435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010518	True	NA	13	True	AGTAAA	-19	NA	96010554	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54371.nnic	chr2	+	1472	6	FSM	ENSG00000231584.9	ENST00000692364.1	1465	6	-9	2	1	0	multi-exon	FALSE	canonical	2	7	junction_2	26.424231303862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010518	True	NA	13	True	AGTAAA	-19	NA	96010554	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96015108_96015326_96019537_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54373.known	chr2	+	893	5	FSM	ENSG00000231584.9	ENST00000692942.1	980	5	82	5	1	0	multi-exon	FALSE	canonical	1	4	junction_4	25.4693443182191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010577	True	NA	13	True	AGTAAA	-19	NA	96010613	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_54375.nnic	chr2	+	1602	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	13	5	0	0	multi-exon	FALSE	canonical	3	19	junction_1	23.1678656764062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010508	True	NA	13	True	AGTAAA	-19	NA	96010544	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54378.nnic	chr2	+	1309	5	FSM	ENSG00000231584.9	ENST00000687200.1	1338	5	23	6	1	0	multi-exon	FALSE	canonical	2	11	junction_2	20.2175666191557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010518	True	NA	13	True	AGTAAA	-19	NA	96010554	96023380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96015108_96015326_96021124_96021234_96021367_96021466_96022673
transcript_54379.known	chr2	+	965	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	25	149	0	-127	multi-exon	FALSE	canonical	2	5	junction_1	24.5673676969177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	96010514	True	NA	NA	False	NA	NA	NA	96010550	96023249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
transcript_54385.known	chr2	-	2394	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.86956007081225	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACCTCCTGTGTGC	-96138489	False	50	-7	True	AATAAA	-20	NA	96138502	96122817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
transcript_54386.known	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_7	94.4887424457517	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96192739	True	NA	-5	True	AATAAA	-26	NA	96208827	96184858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
transcript_54387.nic	chr2	-	2983	8	NIC	ENSG00000084090.14	novel	3377	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	600.826199868963	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96192739	True	NA	-5	True	AATAAA	-26	NA	96208827	96184858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208538
transcript_54388.known	chr2	+	3968	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_5	45.7726871495315	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	96257742	True	NA	56	True	AATAAA	-30	NA	96266224	96274173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
transcript_54389.nic	chr2	+	1967	6	NIC	ENSG00000144021.3	novel	3968	7	NA	NA	-4	-1790	intron_retention	FALSE	canonical	3	657	junction_3	41.2572417885636	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATTGTTATACCACAGA	96257738	True	NA	25	True	AGTAAA	-17	NA	96266220	96271559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96269356_96271110
transcript_5439.nic	chr1	+	1264	5	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	81.3921832856202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231910	True	NA	4	True	ATTAAA	-16	NA	95234209	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95239776_95239910_95244210_95244652_95246541_95246658_95246755
transcript_54391.known	chr2	+	2064	3	FSM	ENSG00000198885.10	ENST00000439118.3	2064	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	96324384	True	NA	33	True	ATTAAA	-39	NA	96325316	96328353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96325566_96325746_96325850_96326641
transcript_54393.known	chr2	+	1947	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	96324398	True	NA	33	True	ATTAAA	-39	NA	96325330	96328353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96325566_96326641
transcript_54394.nic	chr2	+	2739	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	38.4798513762426	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331703	True	NA	-13	True	TATAAA	-23	NA	96335747	96373815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54395.nic	chr2	+	2646	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	61.0098976597793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331703	True	NA	-13	True	TATAAA	-23	NA	96335747	96373815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365968_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54397.known	chr2	+	6030	18	FSM	ENSG00000121152.10	ENST00000240423.9	6030	18	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	33.730562774017	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	96331721	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54399.nic	chr2	+	2683	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	55.894797375985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331720	True	NA	-13	True	TATAAA	-23	NA	96335764	96373815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_5440.known	chr1	+	1294	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	71.9461604256961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	95231921	True	NA	-2	True	ATTAAA	-10	NA	95234220	95247217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_54401.known	chr2	-	440	3	FSM	ENSG00000235480.1	ENST00000425578.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAAGGAAGTCCCTC	-96532280	False	NA	NA	False	AATAAA	-21	NA	96532306	96527939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96528184_96529733_96529850_96532226
transcript_54403.known	chr2	+	2181	7	FSM	ENSG00000196843.17	ENST00000357485.8	2181	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.03464719546263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	96536053	True	NA	19	True	AATAAA	-21	NA	96536751	96552634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_54404.known	chr2	+	2038	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.7893586904929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	96536053	True	NA	15	True	AATAAA	-17	NA	96536751	96552630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_54407.known	chr2	-	5156	21	FSM	ENSG00000114982.19	ENST00000431828.6	5156	21	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_20	23.3861069868416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	-96635780	True	NA	-15	True	ATTAAA	-15	NA	96638312	96593171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
transcript_54408.known	chr2	-	1448	12	FSM	ENSG00000114982.19	ENST00000452268.5	1448	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	53.4251619921203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGATTCTCCCAGAG	-96635799	True	NA	NA	False	NA	NA	NA	96638331	96610725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96634148_96634179_96636920_96637186_96638282
transcript_5441.nnic	chr1	+	1383	5	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	83.0884318061185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231855	True	NA	4	True	ATTAAA	-16	NA	95234154	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95239776_95239910_95244210_95244716_95246541_95246658_95246755
transcript_54410.known	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	86.6238275533932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	-96736691	True	NA	-50	True	NA	NA	NA	96740041	96705974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_54411.known	chr2	-	2398	8	FSM	ENSG00000114988.12	ENST00000264963.9	2398	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	17.1106840951518	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-96736714	True	NA	-4	True	AATGAA	-28	NA	96740064	96705928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_54412.nic	chr2	-	2408	8	NIC	ENSG00000114988.12	novel	2410	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	100.032035684901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-96736726	True	NA	-4	True	AATGAA	-28	NA	96740076	96705928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_54413.nic	chr2	-	2327	7	NIC	ENSG00000114988.12	novel	2398	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	72.4670423173336	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-96736726	True	NA	-4	True	AATGAA	-28	NA	96740076	96705928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96737948_96738068_96739853
transcript_54415.known	chr2	-	1008	6	FSM	ENSG00000114988.12	ENST00000440610.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	94.1522171804785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGGGACCCCGCATTCC	-96736714	True	NA	NA	False	NA	NA	NA	96740064	96707116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96739853
transcript_54417.known	chr2	-	892	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	24.5266295188629	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	-96855012	True	NA	-5	True	ATTAAA	-19	NA	96858016	96847989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
transcript_54418.nnic	chr2	-	1060	4	NNC	ENSG00000213337.9	novel	892	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	160.751015203292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	-96855008	True	NA	-5	True	ATTAAA	-19	NA	96858012	96847989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_96848445_96853400_96853605_96854337_96854614_96857887
transcript_54429.known	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	70.9831626162148	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97093019	True	NA	-24	True	AATAAA	-21	NA	97094882	97083582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_54433.known	chr2	-	1305	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	105.762151325799	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97093019	True	NA	-24	True	AATAAA	-21	NA	97094882	97083582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
transcript_5444.nic	chr1	+	1200	4	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	84.5747532594029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231841	True	NA	4	True	ATTAAA	-16	NA	95234140	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95244210_95244652_95246541_95246658_95246755
transcript_54442.nic	chr2	-	1203	3	ISM	ENSG00000196912.13	ENST00000419390.2	1169	15	-193	33202	-131	-33202	5prime_fragment	FALSE	canonical	3	34	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGTATGTGAAGGT	-97589950	False	NA	NA	False	AATAAA	-22	NA	97590008	97584513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_97585118_97585283_97585399_97589524
transcript_54443.known	chr2	+	613	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3461.87004197154	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGCTGGTCTTATTT	97594306	True	NA	36	True	AGTAAA	-30	NA	97646096	97648191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_54445.known	chr2	+	690	4	FSM	ENSG00000135940.7	ENST00000258424.3	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	6550	junction_3	306.31465303943	3418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	97594271	True	NA	NA	False	AATAGA	-42	NA	97646061	97648383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_97646190_97647066_97647141_97647343_97647444_97647995
transcript_54449.known	chr2	-	2204	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_6	20.2829978060444	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-97662152	True	NA	0	True	NA	NA	NA	97664044	97655938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_5445.known	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	54.1869192907497	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	95231910	True	NA	6	True	ATTAAA	-18	NA	95234209	95247225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
transcript_54450.known	chr2	-	6701	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_20	9.19116423528597	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTGTGGTTTTTT	-97993293	True	NA	-2	True	AATAAA	-18	NA	97995948	97756335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
transcript_54453.known	chr2	-	770	3	FSM	ENSG00000183513.9	ENST00000483527.5	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	300.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGATAAAACTTTTTC	-98603055	True	NA	NA	False	NA	NA	NA	98608507	98600352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98600794_98604107_98604192_98608262
transcript_54454.known	chr2	-	1770	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	58.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAATTCAGTGTTTTT	-98603060	True	NA	NA	False	AATACA	-25	NA	98608512	98599313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98600794_98604107_98604192_98608306
transcript_54463.known	chr2	+	1133	6	FSM	ENSG00000115446.12	ENST00000357765.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	40.293920136914	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599514	True	NA	NA	False	AATAAA	-17	NA	98608588	98618515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_54464.nnic	chr2	+	1272	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	218.510045535669	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599488	True	NA	NA	False	AATAAA	-17	NA	98608562	98618515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_98608727_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_54471.known	chr2	+	1276	6	FSM	ENSG00000115446.12	ENST00000409347.5	1276	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	223.230284683777	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599769	False	NA	NA	False	AATAAA	-17	NA	98608843	98618515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_98609012_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_54472.known	chr2	+	2172	5	FSM	ENSG00000115446.12	ENST00000409975.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	44.8274469493858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599504	True	NA	NA	False	AATAAA	-17	NA	98608578	98618515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_54473.known	chr2	-	8388	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	5.38722769355651	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-98730848	True	NA	0	True	AATAAA	-17	NA	98731132	98619105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
transcript_54482.nic	chr2	-	1227	8	ISM	ENSG00000135951.16	ENST00000355053.8	3037	20	-122	107456	-122	4061	5prime_fragment	FALSE	canonical	2	5	junction_4	3.64215679542342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-99141513	True	NA	NA	False	NA	NA	NA	99141694	99105341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109513_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_54484.known	chr2	-	3160	17	FSM	ENSG00000135951.16	ENST00000674128.1	3160	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	5.25854958615016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAATCTGGAGTAATAA	-99140759	True	NA	NA	False	NA	NA	NA	99141180	98997447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98998222_99018199_99018350_99018535_99018641_99020279_99020483_99035229_99035440_99064938_99065125_99068887_99068999_99071705_99071875_99103966_99104119_99105358_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141067
transcript_54485.nic	chr2	-	1103	8	NIC	ENSG00000135951.16	novel	3160	17	NA	NA	-1	4061	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	2.91372543633873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-99140760	True	NA	NA	False	NA	NA	NA	99141181	99105341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141082
transcript_54486.nic	chr2	-	1271	8	NIC	ENSG00000135951.16	novel	2390	17	NA	NA	-122	4061	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	2.87139303460597	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-99141513	True	NA	NA	False	NA	NA	NA	99141694	99105341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_54490.nic	chr2	-	1964	3	ISM	ENSG00000135951.16	ENST00000674128.1	3160	17	-1	118591	-1	1089	5prime_fragment	FALSE	canonical	1	2	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACGTTATTGAAGTCACT	-99140760	True	NA	NA	False	AATAAA	-19	NA	99141181	99116038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_99117760_99127047_99127177_99141067
transcript_54491.nic	chr2	-	1949	3	ISM	ENSG00000135951.16	ENST00000489926.6	588	5	-32	6636	-1	1089	5prime_fragment	FALSE	canonical	3	11	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACGTTATTGAAGTCACT	-99140760	True	NA	NA	False	AATAAA	-19	NA	99141181	99116038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_99117760_99127047_99127177_99141082
transcript_54496.known	chr2	-	390	3	FSM	ENSG00000135951.16	ENST00000489348.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTCTCTTTTTCTT	-99154725	True	NA	-1	True	AATAAA	-15	NA	99154861	99148264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99148349_99154290_99154428_99154692
transcript_54497.known	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154754	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99148349_99154692
transcript_54498.known	chr2	-	255	3	FSM	ENSG00000135951.16	ENST00000483914.5	255	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154733	True	NA	0	True	AATAAA	-16	NA	99154869	99148263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99148349_99154290_99154428_99154836
transcript_545.known	chr1	-	1692	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	34.5160161649752	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646723	True	NA	-2	True	AATAAA	-20	NA	3650103	3630769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_5450.nnic	chr1	+	1131	3	NIC	ENSG00000122481.17	novel	1078	3	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231841	True	NA	4	True	ATTAAA	-16	NA	95234140	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95244210_95244699_95246755
transcript_54501.known	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.3970762682174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	99141292	True	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
transcript_54503.known	chr2	+	1627	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	6.34209919681348	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATTTTAAATCGTGC	99141249	True	NA	26	True	AATAAA	-38	NA	99141706	99151669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_5451.known	chr1	+	1078	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231911	True	NA	4	True	ATTAAA	-16	NA	95234210	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95244210_95244716_95246755
transcript_54517.nnic	chr2	+	1039	7	NNC	ENSG00000185414.20	novel	4435	6	NA	NA	-95	12	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_6	129.037462260642	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTTTAATTCCATAG	99175068	True	NA	13	True	AATAAA	-16	NA	99181056	99197435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195757_99197153
transcript_54519.nic	chr2	+	1631	7	NIC	ENSG00000185414.20	novel	1497	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	150.523992181387	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAAGGCAACTGCAGTT	99175126	True	NA	1	True	AATAAA	-4	NA	99181114	99197423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195824_99196558
transcript_54527.known	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	26.9485105752103	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179133	True	NA	-14	True	AATAAA	-19	NA	99181058	99169262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_54531.known	chr2	-	1083	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	132.091403538947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179109	True	NA	-14	True	AATAAA	-19	NA	99181034	99169262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
transcript_54532.known	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	49.847768254958	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	99175195	True	NA	23	True	AATAAA	-20	NA	99181183	99199561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
transcript_54539.known	chr2	-	662	6	FSM	ENSG00000158411.11	ENST00000409107.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	90.3026023988235	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTTAAGACCATGTC	-99179125	True	NA	1	True	NA	NA	NA	99181050	99169444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
transcript_54542.nic	chr2	-	995	6	NIC	ENSG00000158411.11	novel	1083	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	260	junction_3	29.3011945148999	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179110	True	NA	-14	True	AATAAA	-19	NA	99181035	99169262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_54543.nic	chr2	+	682	5	ISM	ENSG00000185414.20	ENST00000338148.8	4435	6	-127	4263	-95	120	5prime_fragment	FALSE	canonical	3	318	junction_2	50.2810849127184	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTTTTTTTA	99175068	True	NA	NA	False	ACTAAA	-2	NA	99181056	99195298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115
transcript_54550.known	chr2	+	562	4	FSM	ENSG00000185414.20	ENST00000409145.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	43.4587927428578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTTTGTTGTTGTTGT	99175197	True	NA	NA	False	NA	NA	NA	99181185	99195089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750
transcript_54555.known	chr2	+	1424	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTCTTTTAGTAACG	NA	False	NA	40	True	AATAAA	-37	NA	99154954	99163157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155052_99156300_99156427_99161956
transcript_54557.known	chr2	+	482	2	FSM	ENSG00000144182.17	ENST00000449211.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGCTGTCCAACCC	99154089	True	NA	NA	False	AAAAAG	-38	NA	99154976	99162363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155052_99161956
transcript_54559.known	chr2	+	1497	6	FSM	ENSG00000185414.20	ENST00000409841.1	1497	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	164.815533248538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAAGGCAACTGCAGTT	99186157	False	NA	1	True	AATAAA	-4	NA	99186175	99197423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195824_99196558
transcript_5456.nnic	chr1	+	745	3	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_1	49	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231855	True	NA	4	True	ATTAAA	-16	NA	95234154	95247223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95246541_95246658_95246755
transcript_54567.known	chr2	+	5741	24	FSM	ENSG00000158417.11	ENST00000289371.11	5741	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	157.391964927751	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCCACCGATTGCTGC	99321477	True	NA	4	True	AATAAA	-21	NA	99337388	99401326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492_99368592_99369391_99369482_99371655_99371731_99376346_99376637_99379018_99379127_99379317_99379429_99382158_99382227_99382779_99382922_99389717_99389850_99390218_99390402_99390543_99390706_99392966_99393099_99394266_99394399_99394508_99394586_99394718_99394884_99396759_99396899_99398747_99398910_99399306
transcript_5457.nnic	chr1	+	577	3	NNC	ENSG00000122481.17	novel	1078	3	NA	NA	-55	5570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTTCAATTGATGT	95231855	True	NA	8	True	AATAAA	-25	NA	95234154	95252795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_95234316_95246755_95246862_95252485
transcript_54570.nic	chr2	+	1534	7	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	31712	-1	-22137	5prime_fragment	FALSE	canonical	3	582	junction_5	111.44654922129	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAAAATACCACAGC	99321458	True	NA	NA	False	GATAAA	-3	NA	99337369	99368553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492
transcript_54573.nic	chr2	+	1344	6	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	35973	-1	-26398	5prime_fragment	FALSE	canonical	3	582	junction_5	118.730956367748	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGGAAAAAGCAAAAA	99321458	True	NA	NA	False	AAGAAA	-4	NA	99337369	99364292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270
transcript_54577.nic	chr2	+	1179	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-54	36599	-54	-27024	5prime_fragment	FALSE	canonical	3	605	junction_4	111.231740074495	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGATAAGAAGAAAA	NA	False	NA	-98	True	AATGAA	-12	NA	99337316	99363666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_54578.nic	chr2	+	1375	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-54	36403	-54	-26828	5prime_fragment	FALSE	canonical	3	605	junction_4	111.231740074495	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTTCATGAAGTTGG	NA	False	NA	74	True	TATAAA	-38	NA	99337316	99363862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_5458.known	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	95231968	False	NA	1	True	ATTAAA	-13	NA	95234267	95247220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95246755
transcript_54585.known	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	76.6138858171285	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	-99328218	True	NA	44	True	CATAAA	-20	NA	99336333	99318981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
transcript_5459.known	chr1	-	747	1	FSM	ENSG00000137970.7	ENST00000468715.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	-96679207	True	NA	NA	False	AATGAA	-5	NA	96679620	96678873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_96678900_96679600
transcript_54596.nic	chr2	+	1104	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	38445	-1	-28870	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTTAATACTTTAGAGG	99321458	True	NA	NA	False	NA	NA	NA	99337369	99361820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_546.known	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.090995481007	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	-3646678	True	NA	1	True	AATAAA	-23	NA	3650058	3630766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_5460.known	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	48.4564099850479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_54601.known	chr2	-	1111	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	15.1070255914995	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	-99328218	True	NA	-2	True	AATAAA	-28	NA	99336333	99321533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
transcript_54602.known	chr2	-	739	4	FSM	ENSG00000115514.12	ENST00000438680.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	269.830811188542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAAGAGATTGATTTT	-99328218	True	NA	NA	False	NA	NA	NA	99336333	99321943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99322210_99327534_99327654_99332983_99333243_99336238
transcript_54607.nic	chr2	+	323	2	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	39927	-1	-30352	5prime_fragment	FALSE	canonical	3	916	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAAAGCAGGACTT	99321458	True	NA	48	True	AAAAAG	-7	NA	99337369	99360338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235
transcript_54609.known	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	31.3408678884296	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-100416034	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
transcript_5461.known	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	45.709010156286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_54612.known	chr2	+	1038	6	FSM	ENSG00000115539.14	ENST00000264254.11	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	94.0008510599771	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCATTTATATTT	100556436	True	NA	29	True	ATTAAA	-26	NA	100562992	100576739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_100563074_100566502_100566630_100568930_100569022_100569577_100569722_100571589_100571799_100576353
transcript_54619.known	chr2	+	1291	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	9528	junction_4	2951.79711150682	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	100847305	True	NA	13	True	ATTAAA	-16	NA	101002288	101007267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_5462.known	chr1	+	12014	14	FSM	ENSG00000117569.19	ENST00000609116.5	12014	14	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_13	36.9999200382952	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTTTCTTGA	96717265	True	NA	13	True	ATTAAA	-15	NA	96721782	96823738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_54622.known	chr2	+	770	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_4	6669.46832120072	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	100847309	True	NA	NA	False	NA	NA	NA	101002292	101018289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
transcript_54624.known	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	6652.01046207085	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	100847299	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
transcript_54629.known	chr2	+	716	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2155.28064684548	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	100847309	True	NA	26	True	AATAAA	-14	NA	101002292	101006418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
transcript_5463.known	chr1	+	3321	14	FSM	ENSG00000117569.19	ENST00000674951.1	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	32.0899254223108	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGCTGGTTTTTTTTAA	96717266	True	NA	NA	False	AATAAA	-20	NA	96721783	96815049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_54635.known	chr2	+	825	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	9528	junction_3	3218.76687913589	3690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	100847309	True	NA	27	True	AATAAA	-15	NA	101002292	101006419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
transcript_54636.known	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7691.06498910695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	101002253	True	NA	5	True	AATAAA	-28	NA	101002738	101024032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
transcript_54637.known	chr2	+	817	5	FSM	ENSG00000071082.11	ENST00000409038.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6678.61446615239	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTTTCAGTTATCAA	100847309	True	NA	NA	False	AATATA	-7	NA	101002292	101018306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017858
transcript_54638.nic	chr2	+	1760	11	ISM	ENSG00000071054.17	ENST00000627726.3	4232	30	73064	115	2442	0	3prime_fragment	FALSE	canonical	3	39	junction_2	87.425453959359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	101870253	False	NA	25	True	AATAAA	-38	NA	101870297	101891496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
transcript_54639.known	chr2	+	7640	31	FSM	ENSG00000071054.17	ENST00000350878.9	7600	31	-41	1	-4	-1	multi-exon	FALSE	canonical	3	32	junction_15	70.7255179471235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGCATGAGTTT	101689991	True	NA	33	True	AATAAA	-16	NA	101697702	101894689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
transcript_5464.known	chr1	+	3332	14	FSM	ENSG00000117569.19	ENST00000675735.1	3332	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	53.1282917532211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGATGCTGTGAAAATA	96717259	True	NA	NA	False	CATAAA	-4	NA	96721776	96815029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721897_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_54642.nic	chr2	-	1913	7	NIC	ENSG00000135953.11	novel	1183	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	38.7814388593306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTCATTTTTT	-102735410	True	NA	1	True	ATTAAA	-16	NA	102736897	102715839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_102716042_102718189_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_54644.known	chr2	-	1183	7	FSM	ENSG00000135953.11	ENST00000411991.5	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	37.1786228900426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAAGCACAACTCGC	-102735391	True	NA	NA	False	NA	NA	NA	102736878	102718813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_54645.known	chr2	-	2990	7	FSM	ENSG00000135953.11	ENST00000438943.5	2990	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	31.987844913689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCTTTATTTTTAGT	-102735391	True	NA	NA	False	AAAAAG	-3	NA	102736878	102717037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_54650.known	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14.2211110677049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-102735401	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_54658.known	chr2	+	3198	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.73045923603508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	102736495	True	NA	NA	False	AATAAA	-40	NA	102736910	102817420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_54659.known	chr2	+	3112	5	FSM	ENSG00000170417.16	ENST00000409528.5	3112	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	7.64852927038918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCATCTCTCCATATTG	102736492	True	NA	NA	False	AATAAA	-36	NA	102736907	102817416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_54661.nic	chr2	+	867	5	NIC	ENSG00000170417.16	novel	3198	6	NA	NA	0	-55	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	10.6858551365813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGTTTTTCCAAAAAT	102736495	True	NA	NA	False	ATTAAA	-18	NA	102736910	102843838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102843411
transcript_54662.known	chr2	+	670	4	FSM	ENSG00000170417.16	ENST00000469971.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	12.5521135891752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGAAGTTCTGGCCAG	102736516	True	NA	NA	False	NA	NA	NA	102736931	102775518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102775129
transcript_54663.known	chr2	+	1025	5	FSM	ENSG00000170417.16	ENST00000639249.1	1025	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	10.6858551365813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGGTTTTTCTTT	102736489	True	NA	NA	False	AATAAA	-23	NA	102736904	102933463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102932884
transcript_54664.known	chr2	+	1472	2	FSM	ENSG00000228528.2	ENST00000666357.1	1472	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCTGTCTGCCATGA	NA	False	NA	-45	True	NA	NA	NA	104703238	104705753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_104703808_104704850
transcript_54665.known	chr2	-	642	3	FSM	ENSG00000224509.3	ENST00000456519.2	642	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTACGCATATGCT	-105038456	True	NA	NA	False	AATAAA	-14	NA	105038496	104936240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_104936766_104945003_104945078_105038453
transcript_54673.known	chr2	+	1414	11	FSM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_8	92.7064722659643	2189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	105032446	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_54687.nnic	chr2	-	1395	3	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	207	-7	multi-exon	FALSE	canonical	2	7	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGATTCTTGTTGATA	-105336674	False	594	-6	True	AATATA	-15	NA	105337268	105334033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr2_-_105335069_105336304_105336460_105337063
transcript_54688.nnic	chr2	-	2195	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	11	-7	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGATTCTTGTTGATA	-105336870	True	NA	-6	True	AATATA	-15	NA	105337464	105334033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr2_-_105335069_105336304
transcript_54693.known	chr2	+	854	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_3	103.454096100638	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	105333706	True	NA	75	True	TTTAAA	-43	NA	105337531	105345596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
transcript_54696.nnic	chr2	+	1871	5	NNC	ENSG00000135974.10	novel	854	5	NA	NA	0	-448	intron_retention	FALSE	canonical	2	7	junction_4	115.905942470608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGTAGGTCTGTTATT	105333706	True	NA	NA	False	AATAAA	-14	NA	105337531	105348763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105347665
transcript_54697.nnic	chr2	+	1096	5	NNC	ENSG00000135974.10	novel	854	5	NA	NA	0	362	intron_retention	FALSE	canonical	3	14	junction_4	112.898184219234	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	105333706	True	NA	NA	False	AATAAA	-16	NA	105337531	105349573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105349250
transcript_54698.known	chr2	+	4587	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	16.3571255285137	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAACTTTCTACTTT	105333714	True	NA	NA	False	ATTAAA	-15	NA	105337539	105349211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
transcript_54699.known	chr2	-	1582	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	48.5855488345615	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-105396097	True	NA	-15	True	AATAAA	-17	NA	105399051	105360825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
transcript_547.nic	chr1	-	1557	11	NIC	ENSG00000116213.16	novel	1692	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	81.8511453798907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646723	True	NA	-2	True	AATAAA	-20	NA	3650103	3630769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_54700.known	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_6	52.9614639777515	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-105396107	True	NA	-1	True	AATAAA	-31	NA	105399061	105360811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
transcript_54701.known	chr2	-	1531	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	33.1264244976726	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-105396097	True	NA	-15	True	AATAAA	-17	NA	105399051	105360825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
transcript_54702.known	chr2	-	1367	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	33.5141761050455	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACTTGCAATAAAG	-105396096	True	NA	-50	True	NA	NA	NA	105399050	105360860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
transcript_54706.known	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	33.8846332036653	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	-106187862	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_54707.known	chr2	-	2053	15	FSM	ENSG00000115652.15	ENST00000283148.12	2053	15	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_13	68.3359423759427	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	-106187864	True	NA	-19	True	AATAAA	-17	NA	106194301	106093310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164800_106166055_106166084_106194147
transcript_54710.nnic	chr2	-	1940	14	NIC	ENSG00000115652.15	novel	1839	15	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	91.7379210242207	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATGGACTTCCAGTT	-106187873	True	NA	-22	True	AATAAA	-14	NA	106194310	106093313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_54711.nnic	chr2	-	1955	14	NIC	ENSG00000115652.15	novel	2053	15	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	107.873419136565	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATGGACTTCCAGTT	-106187873	True	NA	-22	True	AATAAA	-14	NA	106194310	106093313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164800_106166055_106166084_106194147
transcript_54722.known	chr2	+	2539	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.42481072744215	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	108288894	108309915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_54728.nic	chr2	+	2979	8	ISM	ENSG00000135968.22	ENST00000309863.11	6909	23	-22	33853	-1	168	5prime_fragment	FALSE	canonical	3	121	junction_7	21.2852348939305	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGGAGAAAATAAATAAGA	108446059	True	NA	NA	False	AAAAAG	-14	NA	108449183	108475562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108475534
transcript_5473.known	chr1	+	1129	5	FSM	ENSG00000117569.19	ENST00000460706.5	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	16.768646337734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATGGAAAACTGTTCC	96717274	True	NA	NA	False	AATAAA	-2	NA	96721791	96771475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707
transcript_54730.nic	chr2	+	3380	7	FSM	ENSG00000135968.22	ENST00000689620.1	4108	7	77	651	-1	0	multi-exon	FALSE	canonical	3	149	junction_1	12.1335164821342	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGTAGAATAGGGTTTT	108446059	True	NA	NA	False	NA	NA	NA	108449183	108473328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826
transcript_54733.known	chr2	+	786	6	FSM	ENSG00000135968.22	ENST00000409821.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	61.4309368315346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATACACCAAGAAGAG	108446106	True	NA	NA	False	NA	NA	NA	108449230	108470062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650
transcript_54739.nic	chr2	+	381	5	FSM	ENSG00000135968.22	ENST00000467566.2	764	5	-29	412	-1	-403	multi-exon	FALSE	canonical	3	149	junction_1	14.0089257261219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAATATAAAAATGAAGC	108446059	True	NA	NA	False	AAAAAG	-35	NA	108449183	108469053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979
transcript_5474.known	chr1	+	3153	14	FSM	ENSG00000117569.19	ENST00000426398.3	3153	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	55.4559369837492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACACTTCTGTAGCT	96717270	True	NA	-19	True	NA	NA	NA	96721787	96814858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721897_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_54746.known	chr2	-	558	3	FSM	ENSG00000214184.3	ENST00000322353.3	558	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTATTAAAATTTCTCA	-108533999	True	NA	NA	False	AATAAA	-9	NA	108534196	108507514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_108507622_108511929_108512013_108533828
transcript_54749.known	chr2	+	4461	10	FSM	ENSG00000169756.16	ENST00000544547.5	4461	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	16.1665712101038	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAACCTGTTGTATAT	108534323	False	NA	17	True	AATAAA	-15	NA	108534354	108687238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108534595_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_54755.known	chr2	+	1627	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	27.2967234500977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAATCTTATACAA	108621056	True	NA	NA	False	AAGAAA	-29	NA	108621265	108684448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_5476.nic	chr1	+	1758	10	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	107.799196039055	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98660037	True	NA	8	True	AATAAA	-15	NA	98661818	98760500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_54761.nic	chr2	+	2295	15	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	43.2312835519722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781479	True	NA	NA	False	AATAAA	-20	NA	108786739	108876578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_108786805_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_54762.known	chr2	+	2375	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	21.3388598283861	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781510	True	NA	NA	False	AATAAA	-20	NA	108786770	108876578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_54764.nnic	chr2	+	2403	15	NNC	ENSG00000163006.12	novel	2375	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	39.4583221092011	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781500	True	NA	NA	False	AATAAA	-20	NA	108786760	108876578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_54765.known	chr2	+	2250	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	34.0013922443804	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781496	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_54767.nnic	chr2	+	2282	14	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	21	junction_10	42.1711082005667	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781486	True	NA	NA	False	AATAAA	-20	NA	108786746	108876578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_54771.nnic	chr2	+	2262	14	NNC	ENSG00000163006.12	novel	2364	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	47.9457286878433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGGTTAAATAATACTG	108781500	True	NA	NA	False	AATAAA	-18	NA	108786760	108876576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_54773.nnic	chr2	+	2286	14	NNC	ENSG00000163006.12	novel	2375	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_10	52.5666666041306	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781500	True	NA	NA	False	AATAAA	-20	NA	108786760	108876578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_54775.nnic	chr2	+	2141	13	NIC	ENSG00000163006.12	novel	2250	14	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	21	junction_10	50.7840608196443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGGTTAAATAATACTG	108781486	True	NA	NA	False	AATAAA	-18	NA	108786746	108876576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108846737_108846931_108856793_108856971_108876087
transcript_5478.known	chr1	+	1736	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_2	26.7055705799371	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98659939	True	NA	8	True	AATAAA	-15	NA	98661720	98760500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_54786.known	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.523345300416	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-109613929	False	2049	-10	True	AATAAA	-17	NA	109613966	109542798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_54788.known	chr2	-	2719	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.999632081965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109611593	True	NA	-55	True	AATAAA	-40	NA	109613927	109542985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
transcript_5479.known	chr1	+	1562	9	FSM	ENSG00000162627.17	ENST00000528824.1	1562	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	121.369013755571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98660080	False	NA	8	True	AATAAA	-15	NA	98661861	98760500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_54790.known	chr2	-	1605	10	FSM	ENSG00000186522.15	ENST00000415095.5	1605	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.872752190981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCACAGTGTGAAAAGG	-109613798	False	NA	NA	False	AATAAA	-3	NA	109613835	109545801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_54792.known	chr2	-	3091	12	FSM	ENSG00000186522.15	ENST00000356688.8	3091	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.670934951819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAATTTTCCTTTCT	-109614106	False	NA	-51	True	AATAAA	-44	NA	109614143	109542981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109544325_109545459_109545543_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_54793.nic	chr2	-	2332	8	NIC	ENSG00000186522.15	novel	3091	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	167.289069138008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109613935	False	2049	-55	True	AATAAA	-40	NA	109613972	109542985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109593050_109593120_109613797
transcript_54795.nnic	chr2	-	2217	7	NIC	ENSG00000186522.15	novel	2719	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	168.15014785073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109611592	True	NA	-55	True	AATAAA	-40	NA	109613926	109542985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109613797
transcript_54797.known	chr2	-	10006	16	FSM	ENSG00000144061.14	ENST00000496524.5	10006	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	29.0550435476451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-110204990	False	8723	NA	False	AATAAA	-20	NA	110205017	110123347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110129260_110131678_110131792_110143541_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_54798.known	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	14.7044966667418	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	-110204972	False	8723	3	True	CATAAA	-25	NA	110204999	110178040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
transcript_54799.nic	chr2	-	441	4	NIC	ENSG00000144061.14	novel	486	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	30.2140511829991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATAATTTTATTTTTT	-110204996	False	8723	NA	False	AATAAA	-18	NA	110205023	110178753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_110178936_110179623_110179685_110201420_110201495_110204899
transcript_54800.known	chr2	-	427	2	FSM	ENSG00000175701.11	ENST00000611969.5	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	0	478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCCTTTTATTTTTTC	-110203824	True	NA	-22	True	AATAAA	-14	NA	110212547	110211528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110211623_110212214
transcript_54802.known	chr2	-	3762	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	0	0	0	0	multi-exon	FALSE	canonical	1	372	junction_3	157.143727337959	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTCTTCATTGC	-110664562	True	NA	-34	True	AATAAA	-17	NA	110678063	110637527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_54811.known	chr2	-	2501	20	FSM	ENSG00000169679.15	ENST00000466333.5	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_7	86.2317948188088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGAGTTGTCTTTTGT	-110664527	True	NA	NA	False	AATAAA	-24	NA	110678028	110642113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_5482.nic	chr1	+	1483	8	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	84.3936355081692	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98660039	True	NA	8	True	AATAAA	-15	NA	98661820	98760500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_54822.nic	chr2	+	2073	17	ISM	ENSG00000153093.20	ENST00000439055.6	2699	18	-31	25306	3	-981	5prime_fragment	FALSE	canonical	3	45	junction_15	21.8313850911938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTAGTGATTTCTTTT	110730476	True	NA	NA	False	NA	NA	NA	110732541	111093242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864
transcript_54836.nic	chr2	+	1623	12	ISM	ENSG00000153093.20	ENST00000389811.8	2714	19	-87	160449	-53	45878	5prime_fragment	FALSE	canonical	3	56	junction_10	18.3366137811396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGGTAGTAGTGGACA	110732475	False	NA	NA	False	AATAAA	-19	NA	110732485	110933895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488
transcript_54837.nic	chr2	+	1389	8	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-148	85835	-53	6001	5prime_fragment	TRUE	canonical	3	80	junction_6	11.4731274315779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATTGTTGGGCATTT	110732475	False	NA	NA	False	AATAAA	-24	NA	110732485	110802182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651
transcript_54838.nic	chr2	+	2169	8	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-69	84976	-8	6860	5prime_fragment	FALSE	canonical	3	80	junction_6	11.4731274315779	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAACTTAAAATGGAC	110730499	True	NA	NA	False	AATAAA	-14	NA	110732564	110803041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651
transcript_54839.known	chr2	+	2188	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	28.8138855415232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCTGCTGATAAAT	110730568	True	NA	NA	False	AATAAA	-26	NA	110732633	110888017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
transcript_54840.known	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-111494933	True	NA	2	True	ATTAAA	-23	NA	111495086	111429308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_111429621_111494884
transcript_54841.known	chr2	-	7762	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_42	77.2565936246739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTTTGCACACATAT	-111876534	True	NA	-3	True	AATAAA	-18	NA	111884193	111767639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_54842.known	chr2	-	1809	5	FSM	ENSG00000153107.13	ENST00000489177.1	1809	5	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	47.91137651957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATTCTGTAATGTTT	NA	False	NA	NA	False	ACTAAA	-9	NA	111884690	111872799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_54843.known	chr2	-	580	2	FSM	ENSG00000153107.13	ENST00000467878.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGTAGAGTTAAGGTG	-111876522	True	NA	NA	False	NA	NA	NA	111884181	111880509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_111880850_111883941
transcript_54846.nnic	chr2	-	1735	10	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-15	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.0776165630357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-112253808	True	NA	0	True	AATAAA	-32	NA	112255075	112215864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112253969_112254108_112254899
transcript_54850.known	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	59	junction_3	13.3510299228187	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-112253820	True	NA	0	True	AATAAA	-32	NA	112255087	112215864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_54855.nic	chr2	-	801	6	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-73	21797	21	0	5prime_fragment	FALSE	canonical	3	79	junction_4	8.70402205879558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTGTAAGTTTTAT	-112253848	True	NA	17	True	AAGAAA	-2	NA	112255115	112233325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_54856.nic	chr2	-	431	3	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	0	26786	0	-1729	5prime_fragment	FALSE	canonical	3	79	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGTCAAACTATTTTA	-112253775	True	NA	NA	False	AGTAAA	-15	NA	112255042	112238314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_112238529_112250190_112250273_112254907
transcript_54857.known	chr2	-	319	2	FSM	ENSG00000144161.14	ENST00000495264.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGAAATGGATATGAG	-112253793	True	NA	NA	False	AAAAAG	-7	NA	112255060	112250106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_112250273_112254907
transcript_54859.known	chr2	+	7527	15	FSM	ENSG00000125630.16	ENST00000263331.10	7527	15	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	35.9560389182941	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGCAAATATTTTCT	112533531	True	NA	23	True	TATAAA	-16	NA	112542464	112579818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_54863.nic	chr2	+	538	4	Fusion	ENSG00000243389.1_ENSG00000125611.16	novel	554	3	NA	NA	-38	0	multi-exon	FALSE	canonical	2	7	junction_1	288.972124761003	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584417	False	NA	29	True	AATAAA	-21	NA	112584430	112589040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_112584487_112585973_112586115_112586199_112586366_112588865
transcript_54865.known	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	508	junction_1	52.8036194045657	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584427	False	NA	29	True	AATAAA	-21	NA	112584440	112589040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
transcript_54869.nnic	chr2	+	695	4	NNC	ENSG00000125611.16	novel	523	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	270.076943768911	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112581031	True	NA	29	True	AATAAA	-21	NA	112584446	112589040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_112584650_112585973_112586125_112586199_112586366_112588865
transcript_54871.known	chr2	+	529	4	FSM	ENSG00000125611.16	ENST00000469030.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	292.271943383023	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584854	False	NA	29	True	AATAAA	-21	NA	112584871	112589040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112584919_112585973_112586115_112586199_112586366_112588865
transcript_54872.known	chr2	+	748	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	56.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112581053	True	NA	29	True	AATAAA	-21	NA	112584468	112589040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112584650_112585973_112586366_112588865
transcript_54875.nic	chr2	+	3412	12	NIC	ENSG00000144136.11	novel	3297	11	NA	NA	-56	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_5	265.897047124299	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112633538	True	NA	20	True	AATAAA	-23	NA	112645882	112663825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112652888_112652948_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_54876.known	chr2	+	3297	11	FSM	ENSG00000144136.11	ENST00000272542.8	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	102.238984736743	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112633594	True	NA	20	True	AATAAA	-23	NA	112645938	112663825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_54879.known	chr2	-	4723	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	5.19464868879504	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGAATTAGAGTTAACT	-112762936	True	NA	-3	True	AATAAA	-19	NA	112764609	112736348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_54881.nnic	chr2	+	1078	2	Antisense	novelGene_ENSG00000169607.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCACTCTGGATACACA	112764160	True	NA	NA	False	NA	NA	NA	112764187	112771484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_112764579_112770797
transcript_54884.nnic	chr2	+	772	2	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGACCTGGGTCAGATTT	112850051	True	NA	5	True	AATAAA	-14	NA	112850144	112863509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr2_+_112850323_112862915
transcript_54886.known	chr2	+	8258	6	FSM	ENSG00000189223.15	ENST00000661674.1	8258	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.38083151964686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTCAACTAAAACAAAA	113234953	True	NA	NA	False	NA	NA	NA	113235535	113272917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113235571_113238089_113238213_113255389_113255550_113259263_113259585_113263277_113263455_113265475
transcript_54887.known	chr2	+	8119	5	FSM	ENSG00000189223.15	ENST00000653055.1	8119	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	12.0701077045733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTCAACTAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	113235514	113272917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113235571_113238089_113238213_113259263_113259585_113263277_113263455_113265475
transcript_54889.nnic	chr2	+	1262	3	NNC	ENSG00000189223.15	novel	2402	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	1.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTTCCCTGTCCTT	NA	False	NA	2	True	AATAAA	-18	NA	113235514	113240825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_113235571_113238089_113238213_113239742
transcript_5489.nic	chr1	+	1037	5	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-283	59464	-283	-12041	5prime_fragment	FALSE	canonical	3	121	junction_1	13.5646599662505	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	99847495	True	NA	9	True	ATTAAA	-18	NA	99850077	99864556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_54890.known	chr2	+	461	2	FSM	ENSG00000189223.15	ENST00000553869.7	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATATAGTCAAATCTTTT	113234969	True	NA	NA	False	AAAAAG	-12	NA	113235551	113238531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113235571_113238089
transcript_5490.nnic	chr1	+	953	5	NIC	ENSG00000162688.17	novel	7091	34	NA	NA	-259	-12041	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	60.4648658313239	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	99847519	True	NA	9	True	ATTAAA	-18	NA	99850101	99864556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_99850416_99851034_99851125_99861502_99861714_99862256_99862424_99864385
transcript_54905.known	chr2	+	1436	16	FSM	ENSG00000136682.16	ENST00000456188.5	1436	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	575.395454351952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	113431831	True	NA	NA	False	AATAAA	-18	NA	113437821	113495799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113457064_113457210_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_54916.known	chr2	+	1740	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	530.580462009926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	113437790	113496119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_54923.known	chr2	+	1827	15	FSM	ENSG00000136682.16	ENST00000259199.9	1827	15	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_6	450.799674954159	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTTTGTCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	113437690	113496204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_54930.known	chr2	+	1665	14	FSM	ENSG00000136682.16	ENST00000416503.6	1665	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	540.988783530052	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113437762	113496171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_5495.known	chr1	+	2062	9	FSM	ENSG00000117620.15	ENST00000427993.7	2062	9	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_1	26.5282867897646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTTAATATTATTTTAA	99966992	True	NA	NA	False	NA	NA	NA	99969978	100023259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_99970163_99974970_99975070_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_54952.known	chr2	+	880	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	117	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	113431848	True	NA	NA	False	TATAAA	-26	NA	113437838	113444375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766
transcript_54961.known	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_6	91.0994572492675	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	113588428	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_5497.known	chr1	+	14321	8	FSM	ENSG00000117620.15	ENST00000533028.8	14321	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	12.6797283174397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCAGTAAATATTTTTT	99967009	True	NA	NA	False	AATAAA	-16	NA	99969995	100035634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_54970.nnic	chr2	-	904	4	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	28.0832096931007	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113626025	True	NA	NA	False	CATAAA	-45	NA	113627162	113611683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113612248_113625608_113625730_113626477_113626572_113627037
transcript_54977.nnic	chr2	-	1344	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	23.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625999	True	NA	NA	False	CATAAA	-45	NA	113627136	113611683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113612248_113625608_113625730_113626477
transcript_54978.known	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	-113625903	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_113612248_113625608_113625730_113626829
transcript_54979.nnic	chr2	-	941	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	3	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625999	True	NA	NA	False	CATAAA	-45	NA	113627136	113611683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_5498.known	chr1	+	1005	5	FSM	ENSG00000117620.15	ENST00000638876.1	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	36.1005540123694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTTTGATTTTTACA	99967059	True	NA	NA	False	AATAAA	-22	NA	99970045	100015692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_99970163_99993536_99993742_100007033_100007157_100011364_100011534_100015301
transcript_54980.known	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	9.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625953	True	NA	NA	False	CATAAA	-45	NA	113627090	113611683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_113612248_113625608_113625730_113627037
transcript_5499.known	chr1	-	655	2	FSM	ENSG00000228084.2	ENST00000454219.2	726	2	71	0	71	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGGGTATGTCTTTATC	-99969805	False	NA	-3	True	ATTAAA	-17	NA	99969864	99968382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_99968478_99969304
transcript_54990.nnic	chr2	-	664	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-46	-9954	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	29	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATCCATGTATTTGT	-113625999	True	NA	-10	True	ATTAAA	-20	NA	113627136	113621732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113622020_113625608_113625730_113626880
transcript_54991.nnic	chr2	-	568	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-107	-9954	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	22.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATCCATGTATTTGT	-113626060	True	NA	-10	True	ATTAAA	-20	NA	113627197	113621732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113622020_113625608_113625730_113627037
transcript_54993.known	chr2	+	1052	10	FSM	ENSG00000144134.19	ENST00000393166.7	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	58.0129827955735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAGTAAATGTATGTG	113626908	True	NA	11	True	AGTAAA	-16	NA	113627306	113643391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641451_113641780_113641865_113642030_113642146_113643189
transcript_54994.known	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000683472.1	2141	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	49.7240824450286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626867	True	NA	12	True	AGTAAA	-17	NA	113627265	113643392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
transcript_54998.known	chr2	+	1979	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.206254514306	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626841	True	NA	12	True	AGTAAA	-17	NA	113627239	113643392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
transcript_55.known	ERCC-00148	+	478	1	FSM	ERCC-00148A	DQ883642	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00148_+_0_500
transcript_5500.known	chr1	-	3848	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_12	11.5427195668958	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAAAATCAAGTACT	-100131559	True	NA	-36	True	AATAAA	-18	NA	100132930	100083569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_55000.known	chr2	+	2041	8	FSM	ENSG00000144134.19	ENST00000450954.5	2041	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	63.9361926821881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATGACA	113626865	True	NA	-12	True	NA	NA	NA	113627263	113643368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113641352_113641481_113641780_113641865_113642030
transcript_55001.known	chr2	-	10314	16	FSM	ENSG00000115084.15	ENST00000245680.7	10314	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	10.2683981223947	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTAGTCTCTAAGATGT	-113753984	True	NA	53	True	ATTAAA	-26	NA	113756642	113706708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_113715196_113717752_113717851_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
transcript_55002.known	chr2	-	1548	1	FSM	ENSG00000270019.1	ENST00000602760.1	1548	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAGGCAAGAAAAAGTTG	-113889578	True	NA	NA	False	AATAAA	-20	NA	113889750	113888202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_113888200_113889800
transcript_55003.known	chr2	+	6589	12	FSM	ENSG00000115091.12	ENST00000263238.7	6589	12	0	0	0	0	multi-exon	TRUE	canonical	3	931	junction_6	77.805542728901	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATAAATTCCTG	113879444	True	NA	NA	False	NA	NA	NA	113890088	113962596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113890324_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_55008.known	chr2	-	730	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-115161281	True	NA	0	True	AATAAA	-15	NA	115161343	115144047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_115144369_115144858_115145028_115161103
transcript_55012.known	chr2	+	3753	14	FSM	ENSG00000088205.13	ENST00000263239.7	3753	14	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_7	95.4757009267574	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCGTTTATGGATGCTT	117799966	True	NA	16	True	ATTAAA	-18	NA	117814690	117832377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_117814863_117817443_117817729_117819648_117819793_117821160_117821297_117821649_117821751_117821861_117822062_117822146_117822262_117824568_117824709_117824939_117825102_117825446_117825600_117826268_117826383_117828948_117829006_117829288_117829467_117830581
transcript_55023.nic	chr2	+	449	2	ISM	ENSG00000088205.13	ENST00000263239.7	3753	14	-30	14687	-30	-5090	5prime_fragment	FALSE	canonical	3	1036	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAGAAAAATGG	117799936	True	NA	40	True	AAAAAG	-6	NA	117814660	117817690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_117814863_117817443
transcript_55025.known	chr2	-	6833	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	11.5211648749427	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-118012137	True	NA	4	True	GATAAA	-16	NA	118014070	117915480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_55029.known	chr2	+	1500	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCCAAATGTGTTGT	118014158	False	NA	2	True	AATAAA	-19	NA	118014173	118015673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118014200_118015700
transcript_5503.nnic	chr1	+	2936	13	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	213.681031758398	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_100038317_100043072_100043230_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_55030.known	chr2	+	3185	6	FSM	ENSG00000125629.16	ENST00000485520.5	3185	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	128.736319661547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	118086235	True	NA	2	True	AATAAA	-17	NA	118088473	118110997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088542_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_55034.known	chr2	+	3562	6	FSM	ENSG00000125629.16	ENST00000245787.9	3562	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	66.3596262798398	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	118086232	True	NA	2	True	AATAAA	-17	NA	118088470	118110997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088542_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_55037.known	chr2	+	627	6	FSM	ENSG00000125629.16	ENST00000467223.5	627	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	157.043433482588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACTTCAGACTGTAAAA	118086311	True	NA	NA	False	NA	NA	NA	118088549	118108390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088667_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_5504.known	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_11	47.8204285680268	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_55044.known	chr2	+	574	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	127.303525088664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAGATATACCAACA	118086213	True	NA	NA	False	NA	NA	NA	118088451	118108372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_55052.known	chr2	+	1871	5	FSM	ENSG00000115107.20	ENST00000393107.2	1871	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	22.2864869371554	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGTGCTGTGGTGGG	119221550	True	NA	NA	False	NA	NA	NA	119223852	119263698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119223889_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_55054.known	chr2	-	950	7	FSM	ENSG00000186132.15	ENST00000409877.5	950	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	42.8735220023838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATTAAGCTCTTTAT	-119366671	False	NA	NA	False	AAAACA	-24	NA	119366682	119302443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366356
transcript_55057.known	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.2520268049763	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366460	True	NA	-13	True	AATAAA	-17	NA	119366834	119302224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
transcript_55060.nnic	chr2	-	660	5	NIC	ENSG00000186132.15	novel	685	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	32.2567822325786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366486	True	NA	-13	True	AATAAA	-17	NA	119366860	119302224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_119302549_119311621_119311704_119317465_119317504_119339826_119339972_119366789
transcript_55062.known	chr2	+	576	5	FSM	ENSG00000155368.18	ENST00000409094.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2746.19286467648	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTCCTTGAGTAG	119341050	True	NA	-14	True	GGGGCT	-9	NA	119366988	119372481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367061_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_55063.known	chr2	+	714	5	FSM	ENSG00000155368.18	ENST00000311521.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2752.29381607415	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGATCTGAGTTCTT	119341131	True	NA	51	True	ATTAAA	-24	NA	119367069	119372546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367215_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_55064.known	chr2	+	564	4	FSM	ENSG00000155368.18	ENST00000355857.8	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	5479	junction_3	67.4800382006083	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAGTGATCTGAGTT	119341038	True	NA	48	True	ATTAAA	-21	NA	119366976	119372543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244
transcript_55067.known	chr2	+	774	4	FSM	ENSG00000155368.18	ENST00000460901.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_1	2607.62501564589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACAGATTAGGGGCTA	119341142	False	NA	-41	True	NA	NA	NA	119367080	119372454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367464_119368187_119368306_119370739_119370803_119372244
transcript_55068.known	chr2	+	654	4	FSM	ENSG00000155368.18	ENST00000535617.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2619.87798698082	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	119340985	True	NA	55	True	ATTAAA	-28	NA	119366923	119372550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367091_119368187_119368306_119370739_119370803_119372244
transcript_55069.known	chr2	+	740	5	FSM	ENSG00000155368.18	ENST00000535757.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2752.29381607415	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	119340985	True	NA	55	True	ATTAAA	-28	NA	119366923	119372550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367091_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_55070.known	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	119430937	True	NA	10	True	ATTAAA	-18	NA	119431853	119438504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119431925_119436888
transcript_55073.known	chr2	+	820	2	FSM	ENSG00000171227.7	ENST00000465296.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAAACGGCTGCCTG	119431173	False	NA	NA	False	GGGGCT	-13	NA	119432089	119437547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119432251_119436888
transcript_55076.nnic	chr2	+	360	4	NNC	ENSG00000144120.13	novel	1216	3	NA	NA	10	1314	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	8.2192186706253	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGGTGTGGTAACTT	119673324	True	NA	4	True	AATAAA	-16	NA	119679176	119687821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_119679226_119685657_119685755_119686752_119686875_119687729
transcript_55078.known	chr2	+	1346	2	FSM	ENSG00000144120.13	ENST00000401466.5	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673314	True	NA	16	True	AATAAA	-16	NA	119679166	119682118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119679226_119680831
transcript_55079.known	chr2	+	791	2	FSM	ENSG00000144120.13	ENST00000445518.1	791	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAACACTAACCATCC	119673338	True	NA	NA	False	GGGGCT	-37	NA	119679190	119681195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119679618_119680831
transcript_55080.known	chr2	+	1363	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673348	True	NA	16	True	AATAAA	-16	NA	119679200	119682118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119679277_119680831
transcript_55081.known	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_16	25.7727448091972	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	120009856	True	NA	NA	False	NA	NA	NA	120013118	120104399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
transcript_55085.nnic	chr2	+	1475	12	NNC	ENSG00000115109.14	novel	1777	17	NA	NA	-26	-13017	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_11	83.8817546331178	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTGCTCTGAACACTA	120009788	True	NA	NA	False	AATAAA	-18	NA	120013050	120088610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120088176
transcript_55087.nic	chr2	+	1913	2	ISM	ENSG00000115109.14	ENST00000331393.8	1777	17	-68	83570	-26	-53571	5prime_fragment	FALSE	canonical	3	319	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTTTAAAAACGCAGT	120009788	True	NA	NA	False	NA	NA	NA	120013050	120020829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_120013211_120019076
transcript_55089.nnic	chr2	-	1721	5	NNC	ENSG00000224789.1	novel	575	3	NA	NA	95	7964	intron_retention	FALSE	canonical	0	0	junction_2	2.04633819296811	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATATGTTTAACTTTC	-120216439	False	1101	NA	False	AATAAA	-44	NA	120216449	120166920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_120168045_120170656_120170784_120174894_120175098_120175700_120175858_120216339
transcript_55092.known	chr2	+	1931	5	FSM	ENSG00000144118.14	ENST00000470417.1	1931	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	121.717911582478	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	120249563	True	NA	-1	True	AAAACA	-30	NA	120252874	120294676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120252981_120278617_120278713_120286066_120286083_120289579_120289758_120293140
transcript_55094.known	chr2	+	2247	5	FSM	ENSG00000144118.14	ENST00000272519.10	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	56.2910960987615	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	120249540	True	NA	33	True	AATAAA	-17	NA	120252851	120294710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120252981_120278617_120278779_120285873_120286083_120289579_120289758_120293140
transcript_55099.nnic	chr2	+	2095	4	NIC	ENSG00000144118.14	novel	2247	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	145.753978409587	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	120249531	True	NA	33	True	AATAAA	-17	NA	120252842	120294710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_120252981_120285873_120286083_120289579_120289758_120293140
transcript_55102.known	chr2	-	1686	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	58.1138728895452	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGCTTGTGCCTGTA	-121727080	True	NA	30	True	ATTAAA	-16	NA	121736875	121726944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
transcript_5511.nic	chr1	-	714	6	ISM	ENSG00000156876.10	ENST00000462159.1	3972	16	-24	36831	-24	-36824	5prime_fragment	FALSE	canonical	3	62	junction_1	7.91454357496375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCAAATTTCATTTTG	-100131608	True	NA	NA	False	NA	NA	NA	100132979	100120393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_55120.known	chr2	+	1416	4	FSM	ENSG00000236859.8	ENST00000419902.3	1416	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	121650057	False	NA	5	True	AATAAA	-18	NA	121650081	121728563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121650382_121650467_121650683_121705767_121705908_121727802
transcript_55124.known	chr2	+	1411	3	FSM	ENSG00000236859.8	ENST00000414554.7	1414	3	2	1	2	0	multi-exon	FALSE	canonical	1	3	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121649550	True	NA	19	True	ACTAAA	-19	NA	121649649	121651535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121649912_121650300_121650382_121650467
transcript_55130.known	chr2	+	1168	2	FSM	ENSG00000236859.8	ENST00000668016.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACTTGTGTTATTTC	NA	False	NA	20	True	ACTAAA	-20	NA	121649637	121651536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121649737_121650467
transcript_55131.known	chr2	+	1182	2	FSM	ENSG00000236859.8	ENST00000413904.6	1182	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121649773	False	NA	19	True	ACTAAA	-19	NA	121649797	121651535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121649912_121650467
transcript_55132.known	chr2	+	1368	2	FSM	ENSG00000236859.8	ENST00000447668.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121650057	False	NA	19	True	ACTAAA	-19	NA	121650081	121651535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121650382_121650467
transcript_55135.known	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	382.375940665728	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	121742239	True	NA	NA	False	ATTAAA	-29	NA	121755650	121767853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_5514.known	chr1	+	3130	11	FSM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	-2	0	2	multi-exon	FALSE	canonical	3	45	junction_6	8.46404158779953	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	100131908	True	NA	9	True	AATAAA	-20	NA	100133162	100150498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_55140.known	chr2	+	2717	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	455.970788538038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	121742251	True	NA	1	True	ATTAAA	-13	NA	121755662	121767179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55143.known	chr2	+	2843	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	379.195147648279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCTGCTGTAAGAA	121742247	True	NA	31	True	AATAAA	-23	NA	121755658	121767294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55146.known	chr2	+	3328	5	FSM	ENSG00000211460.12	ENST00000536142.5	3328	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	482.93963132052	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	121755457	True	NA	NA	False	ATTAAA	-29	NA	121755544	121767853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121765133
transcript_55147.known	chr2	+	605	5	FSM	ENSG00000211460.12	ENST00000495112.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	407.398070073976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTAGAGGAAGTG	121742273	True	NA	NA	False	NA	NA	NA	121755684	121765284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55153.known	chr2	+	1118	3	FSM	ENSG00000211460.12	ENST00000498545.5	1118	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	488.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATTAAGGGATTTA	121742248	True	NA	26	True	ATTAAA	-36	NA	121755659	121765985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121763004_121763085_121765133
transcript_55155.known	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	24.4948974278318	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	126653994	True	NA	15	True	AATAAA	-17	NA	126656157	126696667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
transcript_55156.known	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	99.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	126654020	True	NA	12	True	AATAAA	-14	NA	126656183	126696664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_126656313_126693863_126693948_126695945
transcript_55157.known	chr2	+	1341	2	FSM	ENSG00000136732.16	ENST00000484700.2	1341	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCATCTTGTTTTT	126653969	True	NA	NA	False	AATAAA	-16	NA	126656132	126658767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_126656313_126657606
transcript_55158.nic	chr2	-	1905	15	NIC	ENSG00000136717.15	novel	2365	16	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_4	42.1060371840778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127106923	False	NA	-9	True	GATAAA	-14	NA	127106936	127048026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_55159.known	chr2	-	2143	14	FSM	ENSG00000136717.15	ENST00000409400.1	2143	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	39.7579957348465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAAAACGTGTGTGT	-127107265	False	NA	-20	True	GATAAA	-3	NA	127107278	127048037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_55161.known	chr2	-	2345	15	FSM	ENSG00000163161.14	ENST00000644317.1	2345	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	98.6581399147002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGCATCAAGGGC	-127289073	True	NA	NA	False	NA	NA	NA	127294098	127257474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_55162.known	chr2	-	2718	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	79.007781843542	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-127289119	True	NA	-4	True	AATAAA	-23	NA	127294144	127257289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_55163.nic	chr2	-	2753	15	NIC	ENSG00000163161.14	novel	2787	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	101.965305223825	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCTTCATTGTACAAG	-127289142	True	NA	-10	True	AATAAA	-17	NA	127294167	127257295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289520_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_55164.known	chr2	-	2656	14	FSM	ENSG00000163161.14	ENST00000646654.1	2656	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	80.8002870696172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGAACCAGTCTTCATT	-127289120	True	NA	-17	True	AATAAA	-10	NA	127294145	127257302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127292609_127292847_127293512_127293719_127294053
transcript_55169.nic	chr2	-	619	2	ISM	ENSG00000163161.14	ENST00000490062.1	576	3	-14	779	-1	-779	5prime_fragment	FALSE	canonical	3	289	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGTTTCCTCAAATAA	-127289142	True	NA	NA	False	AATAAA	-18	NA	127294167	127293213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_127293719_127294053
transcript_55170.known	chr2	+	489	3	FSM	ENSG00000236682.3	ENST00000692842.1	559	3	64	6	0	0	multi-exon	FALSE	canonical	3	48	junction_1	11.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATAAATTTTTTCC	127387962	True	NA	9	True	AATAAA	-23	NA	127388241	127389411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_127388312_127388880_127388999_127389110
transcript_55171.known	chr2	+	615	3	FSM	ENSG00000236682.3	ENST00000654207.2	620	3	0	5	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	34.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCTAGAGATAAATTT	127387904	True	NA	4	True	AATAAA	-18	NA	127388183	127389406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_127388385_127388880_127388999_127389110
transcript_55174.known	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_12	48.5418138547345	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-127520590	True	NA	-9	True	AATAAA	-15	NA	127526489	127480811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
transcript_55175.nic	chr2	-	2843	14	NIC	ENSG00000163166.15	novel	2973	14	NA	NA	66	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	133.152090820763	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-127526638	True	NA	-9	True	AATAAA	-15	NA	127526820	127480811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526635
transcript_55179.known	chr2	-	608	4	FSM	ENSG00000163166.15	ENST00000436740.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.317484084666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGACTCTGAGAGTGA	-127520541	True	NA	NA	False	NA	NA	NA	127526440	127505554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127505753_127506691_127506720_127523675_127523792_127526174
transcript_55180.known	chr2	-	1080	3	FSM	ENSG00000163166.15	ENST00000409725.1	1080	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGAAAATGAGGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	127526886	127505039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127505753_127523675_127523792_127526635
transcript_55183.nic	chr2	-	1773	15	ISM	ENSG00000136709.12	ENST00000322313.9	9490	22	3	20887	3	4738	5prime_fragment	FALSE	canonical	3	140	junction_8	71.6976360866114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAGAAAAAAACACA	-127795426	True	NA	NA	False	ATTAAA	-4	NA	127811168	127721913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55188.nic	chr2	-	1465	7	ISM	ENSG00000136709.12	ENST00000393006.5	3574	8	0	27116	0	29	5prime_fragment	FALSE	canonical	3	170	junction_1	58.2113009265001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTCCGTAACTGAAGT	-127795429	True	NA	-11	True	AATAAA	-15	NA	127811171	127762503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55192.known	chr2	-	3104	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_5	23.9115035077261	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATTAATAAACCTCT	-127795429	True	NA	-40	True	NA	NA	NA	127811171	127762532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55195.known	chr2	-	9490	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_15	64.5371801293457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCTGTGTAACTCA	-127795429	True	NA	-6	True	AATAAA	-19	NA	127811171	127701026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55199.known	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_3	41.4085337420521	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-127848352	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
transcript_552.known	chr1	-	446	2	FSM	ENSG00000116213.16	ENST00000479331.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAACTCCAACGTAG	-3646681	True	NA	NA	False	TTTAAA	-1	NA	3650061	3647245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3647561_3649930
transcript_55202.known	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	-127848314	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127848186_127852924_127853106_127858027
transcript_55204.nnic	chr2	-	1730	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	-15	40	combination_of_known_splicesites	FALSE	canonical	3	137	junction_2	448.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTACTTC	-127848331	True	NA	0	True	AATAAA	-23	NA	127858134	127846658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127848186_127850589_127850686_127858027
transcript_55206.known	chr2	-	1037	2	FSM	ENSG00000144231.11	ENST00000487079.1	1037	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCATAGCCCCTTGA	-127848316	True	NA	NA	False	NA	NA	NA	127858119	127847240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127848186_127858027
transcript_55208.known	chr2	+	10761	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	18.7281706260916	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	128082173	True	NA	39	True	AGTAAA	-22	NA	128091199	128195677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_55211.known	chr2	-	1718	7	FSM	ENSG00000286058.1	ENST00000651005.1	1718	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.25897744639355	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGCCCTTATTTCTCAA	-130049916	False	NA	NA	False	TATAAA	-22	NA	130049927	130038704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130039179_130040389_130040561_130045356_130045581_130047181_130047380_130048425_130048620_130049067_130049413_130049815
transcript_55212.known	chr2	-	4337	17	FSM	ENSG00000196604.13	ENST00000409914.7	4337	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	2.1928505991061	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATTCAATTACGTCATT	-130129205	False	NA	NA	False	NA	NA	NA	130129222	130073534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130075573_130077080_130077202_130085813_130085996_130086342_130086388_130088066_130088138_130093437_130093509_130099469_130099637_130100675_130100721_130102109_130102181_130108008_130108080_130110542_130110681_130111994_130112102_130114880_130115055_130115213_130115329_130119994_130120609_130127708_130127865_130129071
transcript_55216.known	chr2	-	3661	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	0	0	0	multi-exon	TRUE	canonical	3	543	junction_6	63.3448576259693	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	-130168306	True	NA	NA	False	AATAAA	-18	NA	130181601	130151407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_55217.known	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	857.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	130181059	True	NA	27	True	AATAAA	-16	NA	130181736	130190713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130181798_130182626_130182776_130190468
transcript_55218.known	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	130181094	False	NA	9	True	NA	NA	NA	130181771	130190695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130181831_130182626_130182776_130190468
transcript_55219.known	chr2	+	599	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_2	32	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130170275	True	NA	41	True	AATAAA	-30	NA	130182261	130190727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130182453_130182626_130182776_130190468
transcript_55220.known	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130182447	True	NA	41	True	AATAAA	-30	NA	130182554	130190727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130182776_130190468
transcript_55221.known	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	130170326	True	NA	43	True	AATAAA	-32	NA	130182312	130190729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130182453_130190468
transcript_55224.known	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	117.589115142516	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	-130342170	False	NA	0	True	AGTAAA	-21	NA	130342349	130338242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_55225.known	chr2	-	2063	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	125.356132678062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCACTACCCAACTT	-130342520	True	NA	-15	True	AGTAAA	-6	NA	130342699	130338257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_55228.known	chr2	-	1769	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	21.4592637338749	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTGAACTTTAACATAA	-130338985	True	NA	NA	False	AATACA	-20	NA	130342164	130337932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_55229.nnic	chr2	-	1417	5	NNC	ENSG00000136710.10	novel	1769	5	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	111.747483193135	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACTTTTGTGTTTTTTG	-130338970	True	NA	-3	True	AGTAAA	-18	NA	130342149	130338245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342038
transcript_55230.known	chr2	-	1247	5	FSM	ENSG00000136710.10	ENST00000409127.1	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	112.174807777861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTCTGTTCTGGGA	-130342145	False	NA	NA	False	NA	NA	NA	130342324	130338495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_55239.known	chr2	+	822	9	FSM	ENSG00000136718.10	ENST00000409649.5	822	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	259.519718663149	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCTGGGCACGCTGGAG	130336238	True	NA	NA	False	GGGGCT	-30	NA	130342909	130346364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130342963_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55242.known	chr2	+	924	9	FSM	ENSG00000136718.10	ENST00000428740.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	371.317060441612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACTCACCACTCAGTC	130336252	True	NA	NA	False	NA	NA	NA	130342923	130346467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130342963_130343085_130343195_130344628_130344726_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55247.known	chr2	+	2411	9	FSM	ENSG00000136718.10	ENST00000259239.8	2411	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	148.915034499543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGTGTGATATGCTGT	130336225	True	NA	NA	False	ATTAAA	-23	NA	130342896	130347967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130342936_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55248.known	chr2	+	2379	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_3	63.539478327434	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	130336250	True	NA	21	True	AATAAA	-19	NA	130342921	130347810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55249.nic	chr2	+	1072	3	ISM	ENSG00000072135.13	ENST00000409022.2	993	9	2591	-539	72	0	3prime_fragment	FALSE	canonical	3	21	junction_2	34	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130372476	True	NA	11	True	AATAAA	-17	NA	130372679	130375405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_130372948_130373156_130373221_130374665
transcript_5525.known	chr1	+	1582	8	FSM	ENSG00000122435.11	ENST00000482437.5	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	6.55588223176215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	100131910	True	NA	NA	False	AATAAA	-9	NA	100133164	100144567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100141020_100143136_100143210_100144068
transcript_55250.known	chr2	+	1717	2	FSM	ENSG00000072135.13	ENST00000462321.1	1717	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTTAAAAGAAATAAAAGG	130372466	False	NA	-28	True	GATAAA	-12	NA	130372607	130374533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130372948_130373156
transcript_55252.nnic	chr2	-	1865	6	NNC	ENSG00000178162.8	novel	564	6	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.8073353879545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	-130427213	True	NA	NA	False	AATAAA	-19	NA	130427782	130416749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_130417483_130418483_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_55255.known	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	37.7910042205814	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	-130427206	True	NA	NA	False	AATAGA	-14	NA	130427775	130418233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_55256.nnic	chr2	-	2018	6	NNC	ENSG00000178162.8	novel	603	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	51.457166653441	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130427197	True	NA	NA	False	AATAAA	-14	NA	130427766	130416754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_130418299_130419070_130419246_130425090_130425159_130425968_130426039_130426165_130426264_130427703
transcript_55259.known	chr2	-	555	5	FSM	ENSG00000178162.8	ENST00000423905.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	49.7267533627523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTTAGAGATGAATGAA	-130427173	True	NA	NA	False	NA	NA	NA	130427742	130418150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130427703
transcript_55260.nnic	chr2	-	2762	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-404	0	intron_retention	FALSE	canonical	3	20	junction_3	50.0268677812233	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130428563	False	NA	NA	False	AATAAA	-14	NA	130428580	130416754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_130418299_130419070_130419246_130425090_130425159_130426165_130426264_130427703
transcript_55263.nnic	chr2	-	3539	4	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-404	5	intron_retention	FALSE	canonical	3	20	junction_2	57.5905084772367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	-130428563	False	NA	NA	False	AATAAA	-19	NA	130428580	130416749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_130419246_130425090_130425159_130426165_130426264_130427703
transcript_55264.known	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	47.5067246701863	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130427969	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
transcript_55268.nnic	chr2	+	2661	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-131	288	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	9.98799279134702	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130693026	False	NA	NA	False	AATAAA	-19	NA	130693150	130704749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130703200
transcript_55269.nnic	chr2	+	1499	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-326	288	intron_retention	FALSE	canonical	2	2	junction_5	19.9358972710034	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130692831	True	NA	NA	False	AATAAA	-19	NA	130692955	130704749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130704557
transcript_55274.known	chr2	-	1273	2	FSM	ENSG00000233221.7	ENST00000446213.2	1273	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTCGCTCTTCTCTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	130836994	130835437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130836026_130836309
transcript_55275.known	chr2	+	4349	9	FSM	ENSG00000115762.17	ENST00000403716.5	4349	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	252.45763877332	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	NA	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131144407_131144450_131146636
transcript_55278.known	chr2	+	4208	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	188.915595017501	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTTCTGTTGTCTTT	NA	False	NA	25	True	ATTAAA	-25	NA	131104943	131149852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
transcript_5528.known	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	8.28009661779378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-100247650	True	NA	-2	True	AATAAA	-20	NA	100249834	100186918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_55281.known	chr2	+	2277	8	FSM	ENSG00000115762.17	ENST00000409158.5	2277	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	199.38220910132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	131104846	131147797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140166_131140276_131146636
transcript_55290.known	chr2	+	4177	6	FSM	ENSG00000115762.17	ENST00000439822.6	4177	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	258.360523300291	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	NA	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140166_131140276_131146636
transcript_55292.known	chr2	+	1520	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTGTGTCGTGCAG	131476104	True	NA	NA	False	ATTAAA	-19	NA	131476118	131482934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
transcript_55294.known	chr2	-	980	4	FSM	ENSG00000173272.16	ENST00000445782.2	980	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	760.862668291723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGAGGAAGCTATTTA	-131483470	True	NA	-86	True	NA	NA	NA	131492387	131469808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_131470344_131472067_131472183_131491875_131492025_131492206
transcript_553.known	chr1	+	506	4	FSM	ENSG00000235169.11	ENST00000642557.4	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.9848380355227	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	3772020	True	NA	26	True	AATAAA	-35	NA	3772748	3775956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_3772789_3773062_3773182_3775298_3775484_3775794
transcript_55305.known	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	28	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-131483480	True	NA	-18	True	AATAAA	-30	NA	131492397	131483959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_131484219_131491875_131492025_131492206
transcript_55306.nnic	chr2	-	677	3	NIC	ENSG00000173272.16	novel	599	3	NA	NA	-245	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	771.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-131492975	False	337	-18	True	AATAAA	-30	NA	131492988	131483959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_131484219_131491875_131492025_131492719
transcript_55311.nic	chr2	+	959	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-4	44625	-4	-266	5prime_fragment	FALSE	canonical	3	8	junction_1	12.3515181253156	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTTTATATTAATG	131681525	True	NA	NA	False	AATAAA	-17	NA	131682470	131722779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_55312.nic	chr2	+	1125	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-4	44459	-4	-100	5prime_fragment	FALSE	canonical	3	8	junction_1	12.3515181253156	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	131681525	True	NA	6	True	AATAAA	-18	NA	131682470	131722945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_55314.nic	chr2	+	1157	6	Fusion	ENSG00000197927.13_ENSG00000287151.1	novel	2119	6	NA	NA	0	-100	multi-exon	FALSE	canonical	2	6	junction_1	13.1240237732183	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	131681535	True	NA	6	True	AATAAA	-18	NA	131682480	131722945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_131682600_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_55316.nnic	chr2	+	1536	6	NNC	ENSG00000287151.1	novel	2005	10	NA	NA	0	-100	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_1	7.11617874986288	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	131681545	True	NA	6	True	AATAAA	-18	NA	131682490	131722945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_131682989_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_5532.nic	chr1	-	555	4	ISM	ENSG00000137992.15	ENST00000370131.3	1521	8	-33	20101	-19	-20101	5prime_fragment	FALSE	canonical	3	62	junction_1	2.35702260395516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTTTTTTTCTATTC	-100247669	True	NA	NA	False	ATTAAA	-18	NA	100249853	100230643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_100230915_100235435_100235512_100240760_100240885_100249769
transcript_55321.known	chr2	-	1682	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATTCTTCACGCCGC	-132347263	True	NA	NA	False	AATAAA	-19	NA	132347297	132345615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_132345600_132347300
transcript_55322.known	chr2	+	669	5	FSM	ENSG00000226953.8	ENST00000606428.2	669	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTAAGTAAAGGTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	133266241	133270464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133270355
transcript_55323.known	chr2	+	1188	5	FSM	ENSG00000226953.8	ENST00000670944.1	1188	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTAGCAATGAGCTAG	133266322	False	NA	NA	False	TTTAAA	-31	NA	133266364	133285445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133284694
transcript_55324.known	chr2	+	3453	2	FSM	ENSG00000287463.1	ENST00000655237.1	3453	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTATAAGAAATTGAGTG	NA	False	NA	NA	False	CATAAA	-15	NA	134718187	134725474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_134718568_134722401
transcript_55326.known	chr2	-	3510	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAGCATAGCCATAT	-134918353	True	NA	NA	False	AATATA	-37	NA	134918710	134864599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
transcript_55327.known	chr2	+	6920	9	FSM	ENSG00000082258.13	ENST00000264157.10	6920	9	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_6	36.5733424094654	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCTAACATGTCT	134913343	True	NA	NA	False	AATAAA	-21	NA	134918821	134959342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229
transcript_5533.known	chr1	-	3637	3	FSM	ENSG00000224616.4	ENST00000665523.1	3637	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGATGCAGGAAAAGGA	-100265869	True	NA	NA	False	TTTAAA	-43	NA	100266152	100261862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100265248_100265814_100265918_100266003
transcript_55332.known	chr2	+	4185	25	FSM	ENSG00000115839.19	ENST00000442034.5	4185	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	42.7351135549627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATCTATATATAATAT	135048669	True	NA	NA	False	AATAGA	-41	NA	135052297	135169989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135167692_135167714_135168544
transcript_55333.known	chr2	+	4891	24	FSM	ENSG00000115839.19	ENST00000264158.13	4891	24	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5260252236148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAGGAGTTTCTTCA	135048663	True	NA	NA	False	AATAAA	-18	NA	135052291	135170710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135168544
transcript_55339.known	chr2	+	1139	3	FSM	ENSG00000115839.19	ENST00000425393.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	20	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTATTTGTATCAATA	135048670	True	NA	NA	False	NA	NA	NA	135052298	135059066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135052326_135052429_135052486_135058010
transcript_55341.nic	chr2	-	1102	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	25.7746645629644	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135530574	False	NA	-18	True	AATAAA	-9	NA	135530589	135345135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135530497
transcript_55342.nic	chr2	-	1070	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_6	21.4061258106698	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135530570	False	1092	-18	True	AATAAA	-9	NA	135530585	135345135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135530525
transcript_55344.nic	chr2	-	1131	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	18.288581744417	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135531232	False	NA	-18	True	AATAAA	-9	NA	135531247	135345135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_55345.nnic	chr2	-	1129	7	NNC	ENSG00000121988.18	novel	823	4	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	21.7057340094476	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135531263	False	NA	-18	True	AATAAA	-9	NA	135531278	135345135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531159
transcript_55352.nnic	chr2	+	3387	14	NNC	ENSG00000144224.17	novel	3771	13	NA	NA	-101	7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	142.66392004582	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCATCTTGCTTTTTTG	135740797	True	NA	NA	False	AATAAA	-23	NA	135741632	135785063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748_135782896_135783508
transcript_55353.known	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_3	61.9899185351941	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	135735520	True	NA	NA	False	AATAAA	-16	NA	135741854	135785056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
transcript_55358.nic	chr2	+	988	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-222	14452	-101	8693	5prime_fragment	FALSE	canonical	3	421	junction_3	60.2813133126169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAAAGAAATGTTGGAT	135740797	True	NA	32	True	NA	NA	NA	135741632	135770604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_5536.known	chr1	+	1534	12	FSM	ENSG00000137996.13	ENST00000260563.4	1534	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	81.6293781178126	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATACATTTTTCTTTT	100259654	True	NA	NA	False	AATAAA	-18	NA	100266248	100291771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100266421_100266523_100266625_100267499_100267539_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_55361.nic	chr2	+	937	7	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-222	15250	-101	7895	5prime_fragment	FALSE	canonical	3	421	junction_3	61.0810026840497	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGGAAGAACAGGTA	135740797	True	NA	-4	True	AATACA	-40	NA	135741632	135769806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768
transcript_55363.nic	chr2	+	899	6	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-222	23145	-101	0	5prime_fragment	FALSE	canonical	3	421	junction_3	66.9059040743042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	135740797	True	NA	16	True	NA	NA	NA	135741632	135761911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817
transcript_55367.known	chr2	-	3753	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_13	99.8924226042696	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATACTCAAGTAGAT	-135861754	True	NA	-14	True	AATAAA	-20	NA	135876443	135839625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_55388.known	chr2	-	3099	16	FSM	ENSG00000115866.11	ENST00000264161.9	3099	16	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_8	78.5526292084202	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTAATCTTTTTTA	-135977983	True	NA	-1	True	AATAAA	-16	NA	135985626	135905880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468_135914512_135916225_135916373_135920452_135920601_135922783_135922919_135924386_135924499_135932782_135932843_135933909_135933991_135943377_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_554.nnic	chr1	+	398	3	NIC	ENSG00000235169.11	novel	506	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	3772009	True	NA	26	True	AATAAA	-35	NA	3772737	3775956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_3772789_3775298_3775484_3775794
transcript_5540.known	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	12.7455874717488	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	100259621	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_55407.known	chr2	+	768	4	FSM	ENSG00000231890.9	ENST00000438432.5	768	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGAAAACCAAACACTGC	135985108	False	NA	NA	False	NA	NA	NA	135985218	136007472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135985517_135998686_135998839_136000438_136000480_136007195
transcript_55409.known	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-136118028	True	NA	0	True	AATAAA	-18	NA	136118149	136114348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_136115913_136118045
transcript_55410.known	chr2	+	3132	6	FSM	ENSG00000150540.14	ENST00000280097.5	3132	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	3.26190128606002	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCTTTCAGACAC	137964258	True	NA	NA	False	AATAAA	-32	NA	137964472	138016364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_137964629_137970164_137970218_138000917_138001026_138002063_138002195_138005131_138005226_138013774
transcript_55411.known	chr2	+	504	2	FSM	ENSG00000150540.14	ENST00000280096.5	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGCATGTGGAATAAC	137964258	True	NA	NA	False	AATAAA	-24	NA	137964472	137967444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_137964629_137967096
transcript_55413.known	chr2	+	6056	11	FSM	ENSG00000144228.9	ENST00000280098.9	6056	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.89136645896019	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTTGATGCTATC	138501699	True	NA	NA	False	NA	NA	NA	138501769	138573547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_138502120_138550156_138550295_138550482_138550605_138550902_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
transcript_55416.known	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	-138780114	True	NA	NA	False	AATAAA	-28	NA	138780390	138669156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_138671666_138780190
transcript_55418.known	chr2	-	10585	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	23.9841545488159	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATGTGTGTGTGT	-144330981	True	NA	NA	False	AATAAA	-29	NA	144332512	143938067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_55420.known	chr2	-	1563	10	FSM	ENSG00000121964.15	ENST00000463875.6	1563	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	29.0516780926679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATGATGGTTACACATG	-144330985	True	NA	NA	False	ATTAAA	-17	NA	144332516	143946826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144235675_144235738_144332438
transcript_55425.known	chr2	-	586	5	FSM	ENSG00000121964.15	ENST00000429978.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	45.6145535986049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTTTTCTTCCGGCA	-144331037	True	NA	NA	False	NA	NA	NA	144332568	144178833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_144178961_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_55426.known	chr2	-	2677	12	FSM	ENSG00000121964.15	ENST00000542155.5	2677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.7479732512734	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	-144331003	True	NA	-7	True	AATAAA	-30	NA	144332534	143946015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211598_144235675_144235738_144332438
transcript_55430.known	chr2	+	2039	5	FSM	ENSG00000204406.14	ENST00000638090.1	2039	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.9180788932265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCGACTTATCCAAAAG	148021582	False	NA	NA	False	NA	NA	NA	148021603	148347611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_148021685_148178699_148178794_148233244_148233396_148342213_148342337_148346021
transcript_55432.known	chr2	+	1602	4	FSM	ENSG00000204406.14	ENST00000637997.1	1602	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTAGCCTTTGTATACT	148021429	False	NA	NA	False	AATATA	-16	NA	148021450	148072063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_148021685_148053932_148054051_148054390_148054450_148070872
transcript_55434.known	chr2	+	4131	2	FSM	ENSG00000204406.14	ENST00000478190.3	4131	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCACATTCAATAAAAG	148021225	False	NA	NA	False	NA	NA	NA	148021237	148028649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_148021685_148024965
transcript_55439.known	chr2	+	324	2	FSM	ENSG00000204406.14	ENST00000470063.5	324	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTAACTATAGCCC	148021433	False	NA	NA	False	ACTAAA	-2	NA	148021454	148178793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_148021685_148178699
transcript_55445.known	chr2	-	6710	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	153.876043407328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011719	True	NA	-1	True	TATAAA	-17	NA	148020747	147930396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
transcript_55452.nic	chr2	-	1738	14	NIC	ENSG00000115947.14	novel	6598	14	NA	NA	-7	1050	combination_of_known_junctions	FALSE	canonical	3	86	junction_13	105.331598118182	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCATGTGCTTTTTTA	-148011742	True	NA	-4	True	AATAAA	-19	NA	148020770	147935262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
transcript_55453.known	chr2	-	6598	14	FSM	ENSG00000115947.14	ENST00000264169.6	6598	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	121.713505884897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148021558	True	NA	-1	True	TATAAA	-17	NA	148021604	147930396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148021447
transcript_55461.known	chr2	-	6472	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	124.402460675914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011709	True	NA	-1	True	TATAAA	-17	NA	148020737	147930396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
transcript_55465.known	chr2	+	5214	11	FSM	ENSG00000121989.15	ENST00000241416.12	5214	11	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_2	15.9527427108946	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATTTGCATATGCAGTT	147844866	False	NA	11	True	AATAAA	-14	NA	147845028	147930822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_147845208_147896300_147896509_147899457_147899568_147899743_147899899_147915190_147915335_147917282_147917427_147918446_147918593_147920229_147920345_147922972_147923112_147926030_147926162_147927079
transcript_55466.known	chr2	-	6328	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	138.272231485573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011733	True	NA	-1	True	TATAAA	-17	NA	148020761	147930396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
transcript_55469.nic	chr2	+	1103	11	ISM	ENSG00000168280.18	ENST00000676875.1	3315	14	365	20837	365	0	5prime_fragment	FALSE	canonical	3	143	junction_8	18.3109257002479	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATCTGGAGATGGA	148875468	True	NA	63	True	AAAAAG	-33	NA	148875591	148962079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970
transcript_55472.known	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.87130498460285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	149038456	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_55473.known	chr2	+	1248	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	4.66476151587624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	149038475	True	NA	NA	False	AATAAA	-18	NA	149038717	149215256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_5548.nnic	chr1	-	2759	6	NNC	ENSG00000162694.14	novel	2825	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	121.03619293418	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-100894597	False	NA	-27	True	AATAAA	-15	NA	100894862	100872390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_100874431_100876793_100876865_100877475_100877648_100877733_100877904_100888752_100888829_100894632
transcript_55481.known	chr2	-	1392	8	FSM	ENSG00000168288.13	ENST00000303319.10	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	58.3822729595069	1796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTTTTCATTACA	-149574029	True	NA	-36	True	AATAAA	-19	NA	149587775	149569636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_55488.known	chr2	-	2684	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	105.300332383141	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478462	True	NA	-3	True	AATAAA	-25	NA	150487667	150468194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
transcript_55489.nic	chr2	-	2665	6	NIC	ENSG00000115963.14	novel	2684	6	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	195.400102354119	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTCTAAATGTGAT	-150478543	True	NA	-17	True	AATAAA	-11	NA	150487748	150468208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487634
transcript_55491.known	chr2	-	2777	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	53.2793346429927	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478462	True	NA	-3	True	AATAAA	-25	NA	150487667	150468194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
transcript_55494.known	chr2	-	1229	8	FSM	ENSG00000123609.11	ENST00000243346.10	1229	8	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_7	10.9376712814577	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGTATTGGTGCCA	-151289069	True	NA	-5	True	AATAAA	-15	NA	151289668	151270469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151270876_151271625_151271733_151275483_151275671_151275757_151275865_151278827_151278991_151281947_151282044_151282867_151282955_151289592
transcript_55497.known	chr2	+	1422	6	FSM	ENSG00000123610.5	ENST00000243347.5	1422	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.632455532033676	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTGCACCTCTCTA	151357531	True	NA	NA	False	AATAAA	-15	NA	151357591	151380046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_151357761_151363942_151364081_151366055_151366218_151370019_151370249_151373548_151373590_151379363
transcript_555.nic	chr1	+	1612	8	NIC	ENSG00000169598.17	novel	3152	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	10.946996606096	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856838	True	NA	NA	False	AATAAA	-18	NA	3857459	3885429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506_3883801_3885037
transcript_5550.nic	chr1	-	2899	6	NIC	ENSG00000162694.14	novel	902	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	139.140217047409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-100894597	False	NA	-27	True	AATAAA	-15	NA	100894862	100872390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_100874431_100876793_100876865_100877475_100877904_100878393_100878448_100888752_100888829_100894632
transcript_55503.known	chr2	+	743	7	FSM	ENSG00000080345.18	ENST00000494333.1	743	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	40.6150628872261	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTCTTTTATGTAA	151398713	True	NA	NA	False	AAGAAA	-33	NA	151409899	151420379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_55508.known	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_5	24.204131878669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	-151820117	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_55509.known	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	223.0187436069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	-151820164	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_55519.known	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4.64987115683305	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-152175752	False	NA	0	True	AATAAA	-17	NA	152175763	152116800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_5552.known	chr1	-	902	6	FSM	ENSG00000162694.14	ENST00000450240.2	902	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	139.386369491425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGATATTTGTGAAG	-100894399	False	NA	NA	False	NA	NA	NA	100894664	100874159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100878423_100878448_100888752_100888829_100894632
transcript_55540.known	chr2	-	1408	13	FSM	ENSG00000196504.19	ENST00000545856.7	1408	13	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_12	196.605498962319	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	-152700871	True	NA	-104	True	TATAAA	-11	NA	152717457	152672564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_55547.known	chr2	+	479	5	FSM	ENSG00000177917.12	ENST00000691702.1	2176	5	917	780	-39	109	multi-exon	FALSE	canonical	3	26	junction_3	360.721499220659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTGTAATAACAAGAAG	152718907	False	NA	NA	False	NA	NA	NA	152718918	152759882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_152719025_152720532_152720587_152732530_152732581_152734993_152735127_152759746
transcript_55556.known	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	33.0689515339624	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	152709428	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
transcript_55559.known	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	320.350849330334	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	152717861	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
transcript_55565.known	chr2	-	1622	14	FSM	ENSG00000196504.19	ENST00000354363.11	1622	14	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_10	337.83692365141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAGATCAAAGTACAA	-152700875	True	NA	-87	True	TATAAA	-28	NA	152717461	152672547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152693157_152693477_152694541_152694623_152715994_152716127_152717355
transcript_55566.known	chr2	-	78	1	FSM	ENSG00000226338.1	ENST00000443733.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	153208163	153208085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_153208100_153208200
transcript_55567.known	chr2	-	1425	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGGCCTCCTGGTGG	-153477708	True	NA	-9	True	AATAAA	-19	NA	153478762	153477337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_153477300_153478800
transcript_5558.known	chr1	-	2825	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	42.5404219537136	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-100891795	True	NA	-27	True	AATAAA	-15	NA	100894842	100872390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
transcript_55582.known	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.7919464042201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-157875401	True	NA	-10	True	AATAAA	-17	NA	157876330	157736445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
transcript_55583.known	chr2	-	2921	11	FSM	ENSG00000115170.16	ENST00000684348.1	2921	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCAAGTCAAACAGTG	-157875863	False	NA	-25	True	AATAAA	-2	NA	157875880	157736460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875741
transcript_55584.known	chr2	-	1160	7	FSM	ENSG00000153237.18	ENST00000409889.1	1160	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.26691175145591	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	-158456516	True	NA	NA	False	AATAAA	-14	NA	158456702	158338592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_55587.nnic	chr2	-	1596	11	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_10	20.9083715291268	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286061	True	NA	-4	True	AATAAA	-14	NA	159286708	159235797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159282874_159286582
transcript_55589.known	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	11.3154761278525	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_5559.known	chr1	-	2835	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	99.9874992186523	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-100891765	True	NA	-23	True	AATAAA	-19	NA	100894812	100872386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
transcript_55591.nnic	chr2	-	1676	10	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	25.3060281697542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159285968	True	NA	-4	True	AATAAA	-14	NA	159286615	159235797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159275545_159275639_159279760_159279946_159282671_159283094_159286535
transcript_55592.nnic	chr2	-	1722	10	NIC	ENSG00000196151.11	novel	1811	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_6	17.7123797119904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286061	True	NA	-4	True	AATAAA	-14	NA	159286708	159235797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_55596.known	chr2	-	1535	7	FSM	ENSG00000196151.11	ENST00000358147.8	1535	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	26.2578030730338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_55597.nnic	chr2	-	1374	6	NIC	ENSG00000196151.11	novel	1535	7	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	29.6081069979153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159285988	True	NA	-4	True	AATAAA	-14	NA	159286635	159235797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_159236191_159248371_159248513_159256195_159256376_159279760_159279946_159282671_159283094_159286582
transcript_55601.known	chr2	-	1920	11	FSM	ENSG00000196151.11	ENST00000409990.7	1920	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	22.7352149758915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAGTGTCCTAAGTT	-159285945	True	NA	-7	True	AATAAA	-11	NA	159286592	159235800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286359
transcript_55607.known	chr2	+	1494	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	2	1555	2	1	multi-exon	FALSE	canonical	3	17	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCGTTTTAAAGTT	159615086	True	NA	12	True	AATAAA	-19	NA	159615295	159617082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_159615454_159615746
transcript_55610.known	chr2	-	2520	3	FSM	ENSG00000226266.7	ENST00000607836.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAAAATT	-159712024	True	NA	NA	False	NA	NA	NA	159712435	159693200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159695421_159710716_159710895_159712313
transcript_55617.nic	chr2	+	3536	10	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-13	-10	combination_of_known_junctions	FALSE	canonical	3	324	junction_1	165.546755918265	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTTGAAATGTTT	159700167	True	NA	11	True	AATAAA	-16	NA	159712485	159768573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_55619.known	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	174.779861540167	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	159700180	True	NA	12	True	AATAAA	-27	NA	159712498	159771027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_55625.known	chr2	-	3932	6	FSM	ENSG00000241399.7	ENST00000259053.6	3932	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	4.2614551505325	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCTTCTTTGAGC	-159797931	True	NA	2	True	AATAAA	-16	NA	159798208	159768627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159783358_159783470_159798131
transcript_55629.nic	chr2	+	976	5	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-196	-275	combination_of_known_junctions	FALSE	canonical	3	324	junction_1	216.690303197905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTCAATGAGCACTTT	159712034	True	NA	NA	False	NA	NA	NA	159712260	159747851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_55630.nic	chr2	+	716	5	ISM	ENSG00000136536.15	ENST00000259050.8	5922	10	-33	23176	9	-275	5prime_fragment	FALSE	canonical	3	290	junction_1	230.416335141413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTCAATGAGCACTTT	159712239	False	NA	NA	False	NA	NA	NA	159712465	159747851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_55633.known	chr2	-	1402	2	FSM	ENSG00000054219.11	ENST00000492955.1	1402	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTTAGCCATTTTC	-159904449	True	NA	NA	False	ACTAAA	-22	NA	159904749	159902364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159903606_159904588
transcript_55635.known	chr2	-	4286	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_13	74.9998816567114	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160492564	True	NA	-4	True	AATAAA	-18	NA	160493807	160272150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_55638.nic	chr2	+	2183	9	NIC	ENSG00000136560.14	novel	2098	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	53.6188807697438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTCCTTTGTTCCT	161157773	True	NA	18	True	ATTAAA	-28	NA	161160427	161236187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_161160487_161161284_161161413_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_55641.known	chr2	+	2098	8	FSM	ENSG00000136560.14	ENST00000392749.7	2098	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	32.4685090762211	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAAGGAATCACATT	161157773	True	NA	61	True	AGTAAA	-17	NA	161160427	161236230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_55642.nic	chr2	+	937	6	ISM	ENSG00000136560.14	ENST00000392749.7	2098	8	-1	11176	0	308	5prime_fragment	FALSE	canonical	3	80	junction_1	35.9165699921359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCAGTTGTTTTTTGGG	161157772	True	NA	NA	False	AATAAA	-21	NA	161160426	161225054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630
transcript_55645.known	chr2	+	550	4	FSM	ENSG00000136560.14	ENST00000440506.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	59.2977421342687	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACCAAAGGTAGACAT	161157644	True	NA	NA	False	GATAAA	-25	NA	161160298	161204781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674
transcript_55647.known	chr2	+	2385	3	FSM	ENSG00000227403.3	ENST00000655684.2	2441	3	10	46	-9	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCATTCTCTATTCAT	161244520	True	NA	NA	False	ATTAAA	-15	NA	161244729	161249049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161244896_161245423_161245468_161246874
transcript_55649.known	chr2	+	427	2	FSM	ENSG00000136560.14	ENST00000477952.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATGGTGAAAGTCTT	161157772	True	NA	NA	False	ATTAAA	-4	NA	161160426	161161651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160487_161161284
transcript_5565.known	chr1	-	678	2	FSM	ENSG00000162694.14	ENST00000480774.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCCATTCATCTGTCA	-100891758	True	NA	NA	False	NA	NA	NA	100894805	100888323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100888829_100894632
transcript_55650.known	chr2	+	2333	2	FSM	ENSG00000227403.3	ENST00000439050.1	2333	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCATTCTCTATTCATC	161244529	True	NA	NA	False	ATTAAA	-16	NA	161244738	161249050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161244896_161246874
transcript_55651.known	chr2	+	1130	3	FSM	ENSG00000227403.3	ENST00000436506.3	2466	3	0	1336	0	-1336	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTGTCTCTTTCTCC	161244544	True	NA	NA	False	CATAAA	-17	NA	161244753	161247714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161244896_161245423_161245468_161246770
transcript_55652.known	chr2	+	555	3	FSM	ENSG00000136560.14	ENST00000403609.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	NA	False	NA	NA	False	AATAAA	-19	NA	161179620	161204979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161179762_161203486_161203596_161204674
transcript_5566.known	chr1	+	429	1	FSM	ENSG00000273204.1	ENST00000609247.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTTAACAGCCTTTAT	100894711	True	NA	5	True	ATTAAA	-17	NA	100894927	100895356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100894900_100895400
transcript_55661.known	chr2	+	1567	12	FSM	ENSG00000115233.12	ENST00000409682.8	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_5	96.697620198566	2219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGAGATCTTTTTG	161293298	True	NA	14	True	AATAAA	-17	NA	161308424	161411717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161308605_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106_161370178_161371171_161371323_161385463_161385572_161391103_161391179_161395077_161395204_161408836_161408900_161411301
transcript_5569.known	chr1	+	8204	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	9.92975326984513	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATTGTGTCTTATCAG	100893165	True	NA	12	True	AATAAA	-22	NA	100896089	100981757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
transcript_55692.known	chr2	+	3651	8	FSM	ENSG00000115271.11	ENST00000437150.7	3651	8	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_6	24.5639523509968	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTTTGTCTTTTTAC	162340114	True	NA	NA	False	AATAAA	-17	NA	162344131	162363123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_55698.known	chr2	+	1694	8	FSM	ENSG00000115271.11	ENST00000233612.8	1694	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	133.881305945351	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGAAATTTTACATT	162344327	False	NA	26	True	AATAAA	-21	NA	162344337	162361122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_162344526_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_557.known	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856854	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_55705.known	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	18.2976926292786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	162340141	True	NA	NA	False	NA	NA	NA	162344158	162360971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
transcript_55713.known	chr2	-	2415	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	61.5061453609293	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATTGTACCCATTA	-164620669	True	NA	NA	False	ATTAAA	-20	NA	164621482	164492416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_55720.known	chr2	+	499	4	FSM	ENSG00000178662.16	ENST00000464503.1	499	4	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_3	6.37704215656966	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTATTTGTGGATTT	165468150	True	NA	5	True	AATAAA	-18	NA	165469705	165566981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165566776
transcript_55725.known	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	19.9170780989582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	-165791531	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
transcript_55726.nic	chr2	-	1294	2	ISM	ENSG00000115339.14	ENST00000392701.8	3436	11	-35	22195	-35	648	5prime_fragment	FALSE	canonical	3	149	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGATTTTGGAACTGT	-165791566	True	NA	-4	True	AATAAA	-15	NA	165794282	165769782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_165770809_165794014
transcript_55727.known	chr2	-	9768	27	FSM	ENSG00000169432.19	ENST00000409672.5	9768	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	7.85444509130388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTACACGTATTTTC	-166374127	True	NA	NA	False	AATAAA	-18	NA	166375993	166195184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_166199865_166203954_166204226_166204359_166204465_166226566_166226705_166227669_166227724_166228690_166228973_166233339_166233463_166238093_166238268_166242501_166242657_166251764_166251886_166272398_166272876_166276982_166277340_166278139_166278314_166280356_166280596_166281678_166281809_166284485_166284825_166286335_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_55730.nic	chr2	-	439	2	ISM	ENSG00000169432.19	ENST00000472119.2	2283	7	24	9586	-8	-5139	5prime_fragment	FALSE	canonical	3	22	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAAAGATGATGA	-166374111	True	NA	NA	False	AAGAAA	-17	NA	166375977	166311648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_166311807_166375696
transcript_55731.known	chr2	-	3231	15	FSM	ENSG00000169432.19	ENST00000454569.6	3231	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	6.43055524945759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTAATATGCTAGATT	-166374103	True	NA	NA	False	AATAAA	-17	NA	166375969	166277715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_166278314_166280356_166280596_166281678_166281809_166284485_166284825_166286335_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_55732.known	chr2	-	3272	18	FSM	ENSG00000198648.11	ENST00000355999.5	3272	18	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	28.3774607182639	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	-168247491	False	NA	-1	True	AATAAA	-18	NA	168247595	167954021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168065318_168065382_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
transcript_55734.known	chr2	-	1342	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_4	27.8607649252892	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-168886874	True	NA	-4	True	AATAAA	-23	NA	168890430	168870890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
transcript_5574.known	chr1	-	1034	8	FSM	ENSG00000117543.22	ENST00000488176.1	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	105.102476717939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTGGATGTATCCC	-101021461	True	NA	NA	False	NA	NA	NA	101025767	100990357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025664
transcript_55741.known	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	112.564176706228	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	-169569292	True	NA	-21	True	AATAAA	-16	NA	169573865	169528507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_55743.nic	chr2	-	2931	14	NIC	ENSG00000138399.18	novel	4200	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	111.952018462687	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569339	True	NA	-27	True	AATAAA	-17	NA	169573912	169529754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169571652_169572172_169573668
transcript_55746.known	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	128.216255927334	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569259	True	NA	-27	True	AATAAA	-17	NA	169573832	169529754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_55748.nic	chr2	-	2802	13	NIC	ENSG00000138399.18	novel	2791	14	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	129.290263447107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569339	True	NA	-27	True	AATAAA	-17	NA	169573912	169529754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169571652_169572172_169573668
transcript_5575.known	chr1	-	1143	8	FSM	ENSG00000117543.22	ENST00000342173.11	1143	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	106.869747155792	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATGGTTTTATAAGT	-101021457	True	NA	NA	False	NA	NA	NA	101025763	100990223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990629_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
transcript_55752.nic	chr2	-	1214	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-80	30775	-37	0	5prime_fragment	FALSE	canonical	0	0	junction_2	128.703146814676	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-169569339	True	NA	-7	True	AGTAAA	-19	NA	169573912	169560529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_55753.known	chr2	-	1045	4	FSM	ENSG00000138399.18	ENST00000438035.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.370264740829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-169569239	True	NA	-7	True	AGTAAA	-19	NA	169573812	169560529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169560786_169563224_169563351_169571652_169572172_169573668
transcript_55758.known	chr2	+	6357	14	FSM	ENSG00000138398.17	ENST00000260970.8	6357	14	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	43.6010694185116	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169576010	True	NA	NA	False	AATAAA	-16	NA	169584350	169641406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_55760.known	chr2	+	6453	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	103.058953657574	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	169584624	False	NA	NA	False	ATTAAA	-3	NA	169584646	169641389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_55763.known	chr2	+	1507	12	FSM	ENSG00000138398.17	ENST00000414307.6	1507	12	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	31.967183586395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTATTCTTGTTAAAAA	169576001	True	NA	-36	True	NA	NA	NA	169584341	169633519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159
transcript_55765.known	chr2	+	6150	11	FSM	ENSG00000138398.17	ENST00000676508.1	6150	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.560851950496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169576003	True	NA	NA	False	AATAAA	-16	NA	169584343	169641406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
transcript_55770.nic	chr2	+	952	10	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-9	2568	-9	67	5prime_fragment	FALSE	canonical	3	393	junction_1	34.4945871581307	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAAGCGAA	NA	False	NA	NA	False	AAAAAG	-30	NA	169584332	169630951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_55771.nic	chr2	+	1126	10	ISM	ENSG00000138398.17	ENST00000678638.1	2661	15	-232	7058	0	67	5prime_fragment	FALSE	canonical	3	121	junction_1	112.848417942383	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAAGCGAA	169576227	False	NA	NA	False	AAAAAG	-30	NA	169584567	169630951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_55775.known	chr2	-	2153	9	FSM	ENSG00000154479.13	ENST00000447353.6	2153	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTCTGGCTTATTT	-169694210	True	NA	NA	False	AATAAA	-16	NA	169694405	169645424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169646183_169649181_169649347_169650328_169650522_169654074_169654215_169662279_169662437_169674575_169674770_169674866_169675041_169681006_169681234_169694260
transcript_55776.known	chr2	+	631	5	FSM	ENSG00000144362.12	ENST00000449906.5	631	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	50.3338852066876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTTTAAGTATTTGGG	169692123	True	NA	NA	False	NA	NA	NA	169694486	169701118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697864_169697983_169700945
transcript_55777.nic	chr2	+	1250	5	NIC	ENSG00000144362.12	novel	1252	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	47.4183508781147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAAGTGTATCACTT	169692064	True	NA	7	True	AATAAA	-17	NA	169694427	169701706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_169694623_169695214_169695248_169697360_169697532_169697892_169697983_169700945
transcript_55782.known	chr2	+	1121	4	FSM	ENSG00000144362.12	ENST00000359744.8	1121	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	15.084944665313	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	169692105	True	NA	9	True	AATAAA	-19	NA	169694468	169701708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169700945
transcript_55785.nnic	chr2	+	1058	4	NNC	ENSG00000144362.12	novel	1121	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	48.0092583663702	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	169692068	True	NA	9	True	AATAAA	-19	NA	169694431	169701708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_169694523_169695214_169695248_169697360_169697532_169700945
transcript_55787.known	chr2	+	908	4	FSM	ENSG00000144362.12	ENST00000438710.5	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	34.6153466286591	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTATCATACTCATT	169692107	True	NA	NA	False	NA	NA	NA	169694470	169701378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169694742_169695214_169695248_169697360_169697532_169700945
transcript_55789.known	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	18.9267594221045	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	169728347	True	NA	14	True	AATAAA	-15	NA	169733831	169751878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
transcript_55792.nic	chr2	+	1172	3	ISM	ENSG00000144362.12	ENST00000449906.5	631	5	-59	2814	-26	4	intron_retention	FALSE	canonical	3	86	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTACTTAGTGTTATAT	169692064	True	NA	7	True	ATTAAA	-17	NA	169694427	169698304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_169694623_169695214_169695248_169697360
transcript_55801.known	chr2	+	1650	12	FSM	ENSG00000138385.16	ENST00000260956.9	1650	12	0	0	0	0	multi-exon	FALSE	canonical	3	2994	junction_8	298.609892281878	4335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169756822	True	NA	27	True	AATAAA	-28	NA	169798870	169812064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_55806.known	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	993.920062635367	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169799229	False	NA	27	True	AATAAA	-28	NA	169799278	169812064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_55826.known	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_7	249.242198412283	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814861	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_55827.known	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	395.239064829562	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814867	True	NA	-18	True	AATAAA	-17	NA	169824931	169811756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_55845.known	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_6	241.79496594337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	-169814810	True	NA	-75	True	TTTAAA	-6	NA	169824874	169811813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_55852.known	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000409340.5	472	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	441.758033316883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814750	True	NA	-18	True	AATAAA	-17	NA	169824814	169811756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169824488_169824641_169824781
transcript_5586.known	chr1	-	1047	7	FSM	ENSG00000117543.22	ENST00000464270.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	114.499878699596	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGGTTTTATAAGTG	-101021509	True	NA	NA	False	NA	NA	NA	101025815	100990222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025682
transcript_55863.known	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	211.256360850981	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814841	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
transcript_55864.nnic	chr2	+	1127	6	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	11	6578	multi-exon	FALSE	canonical	2	8	junction_4	9.76933979345585	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTACCTGGCTACTCA	170770940	False	NA	NA	False	AATAAA	-41	NA	170770988	170785307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_55867.known	chr2	+	1327	4	FSM	ENSG00000239467.7	ENST00000662201.2	1444	4	117	0	-21	0	multi-exon	FALSE	canonical	3	10	junction_1	9.20144916122817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	170770675	True	NA	NA	False	AATAAA	-15	NA	170771026	170778729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643
transcript_55868.known	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	11	junction_1	8.73053390247253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	170770986	False	NA	8	True	ATTAAA	-22	NA	170771337	170778584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
transcript_55869.known	chr2	+	1291	3	FSM	ENSG00000239467.7	ENST00000662915.2	1411	3	118	2	-20	0	multi-exon	FALSE	canonical	2	3	junction_1	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTGTCTTTGAGGG	170770676	True	NA	NA	False	AATAAA	-11	NA	170771027	170778725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771188_170777376_170777426_170777643
transcript_55870.known	chr2	+	1505	3	FSM	ENSG00000239467.7	ENST00000664870.2	1628	3	123	0	10	0	multi-exon	FALSE	canonical	3	3	junction_1	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	170770706	True	NA	NA	False	AATAAA	-15	NA	170771057	170778729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771428_170777376_170777426_170777643
transcript_55875.known	chr2	+	1029	7	FSM	ENSG00000128683.14	ENST00000344257.9	1029	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	2.21735578260835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGATCCTTCAGGATC	170816793	True	NA	7	True	AATAAA	-18	NA	170816911	170842759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_55877.known	chr2	+	1252	7	FSM	ENSG00000128683.14	ENST00000375272.5	1252	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.54338193757822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGAGGATCCTTCAGG	NA	False	NA	4	True	AATAAA	-15	NA	170816689	170842756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170817053_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_55882.known	chr2	+	2447	10	FSM	ENSG00000115806.13	ENST00000234160.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	952	junction_9	84.9428275407482	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGCTTCCTCAGTTA	170918673	True	NA	12	True	ATTAAA	-29	NA	170929252	170967130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_55886.known	chr2	+	951	8	FSM	ENSG00000115806.13	ENST00000493692.5	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	359.881896727019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTGCAGCAAGCTCA	170918673	True	NA	NA	False	NA	NA	NA	170929252	170965891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170961662_170961750_170962838_170962947_170965789
transcript_55889.known	chr2	-	5723	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_18	22.7953394359461	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	-171160879	False	629	-18	True	ATTAAA	-20	NA	171160893	170990822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_55894.nic	chr2	-	2505	11	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	36.9433349875184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-171432374	True	NA	NA	False	NA	NA	NA	171434106	171323250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171433882
transcript_55896.nic	chr2	-	1884	11	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	36.9433349875184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGACTCTTCCCATTGT	-171432290	True	NA	-4	True	AGTAAA	-16	NA	171434022	171323787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171433882
transcript_559.known	chr1	-	1645	4	FSM	ENSG00000198912.12	ENST00000361605.4	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	18.0616229121921	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGCAGTCGTATGT	-3896637	True	NA	-23	True	AATAAA	-17	NA	3900272	3889132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3890074_3890568_3891058_3892882_3892997_3900171
transcript_5590.known	chr1	-	894	7	FSM	ENSG00000117543.22	ENST00000498372.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	145.617936166302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCATCTTGAATTTT	-101021449	True	NA	NA	False	NA	NA	NA	101025755	100990333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025664
transcript_55901.known	chr2	-	9770	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	32.8986472009765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	-171432258	True	NA	NA	False	ATTAAA	-20	NA	171433990	171315745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
transcript_55904.known	chr2	-	9791	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	35.1297418924776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	171434802	171315745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
transcript_55912.nnic	chr2	-	1680	9	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	38.1590012316884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGACTCTTCCCATTGT	-171432365	True	NA	-4	True	AGTAAA	-16	NA	171434097	171323787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171433882
transcript_5592.known	chr1	-	948	7	FSM	ENSG00000117543.22	ENST00000466807.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	123.575438048541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTCATAATTCCCAGG	-101021465	True	NA	NA	False	NA	NA	NA	101025771	100990314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025639
transcript_55920.known	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	50.2858495669176	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	-171326547	True	NA	13	True	NA	NA	NA	171327065	171323900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
transcript_55923.known	chr2	-	623	4	FSM	ENSG00000123600.21	ENST00000462821.1	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	43.9267066322477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTGAACACTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	171434802	171337471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171337503_171339183_171339555_171360421_171360514_171434673
transcript_55927.known	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	543	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	-171517696	False	NA	-48	True	NA	NA	NA	171517716	171517269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171517300_171517700
transcript_55929.known	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	171521906	True	NA	NA	False	AATAAA	-14	NA	171522473	171558129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
transcript_55931.known	chr2	+	763	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCATGTTGCCCGGG	171522318	False	NA	NA	False	NA	NA	NA	171522347	171551140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171522739_171541584_171541794_171550977
transcript_55932.known	chr2	+	4354	18	FSM	ENSG00000077380.16	ENST00000397119.8	4354	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	290.68965841366	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGTATTATTTAAAC	171685610	True	NA	NA	False	AATAAA	-16	NA	171687468	171750158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_55933.known	chr2	+	2552	18	FSM	ENSG00000077380.16	ENST00000409453.5	2552	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	304.414862160996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTTACTCCTTAC	171682239	True	NA	14	True	AATAAA	-26	NA	171687775	171748420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_55934.known	chr2	+	2196	17	FSM	ENSG00000077380.16	ENST00000409317.5	2196	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	219.409968722937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAGCAAGGAAACTT	171687638	False	NA	23	True	ATTAAA	-29	NA	171687707	171748011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_55935.known	chr2	+	2494	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_15	183.891707262726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171685642	False	NA	5	True	AATAAA	-17	NA	171687500	171748411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_55937.known	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	62.9538102279935	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171687602	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_55946.nic	chr2	+	305	2	ISM	ENSG00000077380.16	ENST00000471482.5	581	3	-35	2824	28	-2824	5prime_fragment	FALSE	canonical	3	321	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	NA	False	NA	48	True	AAGAAA	-12	NA	171687436	171690260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_171687628_171690146
transcript_55949.known	chr2	-	3936	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	11.9988465420265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGTATTTCATTGTAT	-171892782	True	NA	-8	True	TATAAA	-18	NA	171894244	171783404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_55952.nnic	chr2	-	494	5	NNC	ENSG00000115840.14	novel	556	5	NA	NA	5	4868	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26.1772802254168	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTGAAATAGGCTGTT	-171892777	True	NA	NA	False	AATAAA	-16	NA	171894239	171850932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_171851077_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_55953.nic	chr2	-	611	4	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-68	21615	-68	155	5prime_fragment	FALSE	canonical	3	49	junction_3	8.52447456836295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTAGTAATGCTGTTG	-171894286	False	NA	NA	False	ATTAAA	-18	NA	171894312	171855645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_171855950_171868680_171868824_171893204_171893259_171894202
transcript_55954.nic	chr2	-	759	2	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-68	58579	-68	-36683	5prime_fragment	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCTTAGTTTTTTGTT	-171894286	False	NA	NA	False	AAAAAG	-23	NA	171894312	171892609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_171893259_171894202
transcript_55961.known	chr2	+	1634	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	101.545260844611	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	171911204	True	NA	12	True	AATAAA	-20	NA	171922460	171983686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_55968.known	chr2	+	1567	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	263.039498512634	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	171911191	True	NA	8	True	AATAAA	-16	NA	171922447	171983682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_55972.known	chr2	+	3049	10	FSM	ENSG00000172878.14	ENST00000315796.5	3049	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGTGTATATATAT	171999176	True	NA	12	True	ATTAAA	-15	NA	171999952	172082430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_172000010_172061497_172061656_172063710_172063861_172065603_172065753_172066263_172066307_172070906_172071071_172077796_172077895_172079214_172079263_172080127_172080207_172080327
transcript_55979.known	chr2	+	929	3	FSM	ENSG00000172878.14	ENST00000493035.5	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGACCAGCCTGGCCAA	171999166	True	NA	NA	False	NA	NA	NA	171999942	172064414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_172000010_172061497_172061656_172063710
transcript_55983.known	chr2	+	3859	20	FSM	ENSG00000091436.17	ENST00000375213.8	3859	20	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	19.4621587515028	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTTCAGCATTCACT	173074751	True	NA	11	True	AATAAA	-21	NA	173075845	173268015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_55988.nnic	chr2	+	2268	11	NNC	ENSG00000144354.14	novel	2778	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_10	249.881972138848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341390	True	NA	15	True	AATAAA	-14	NA	173354832	173368904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633_173367832_173368287
transcript_55992.known	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	206.044463618061	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	173341429	True	NA	21	True	AATAAA	-27	NA	173354871	173368997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_56.known	ERCC-00150	+	727	1	FSM	ERCC-00150A	DQ883659	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00150_+_0_700
transcript_56008.known	chr2	+	2500	9	FSM	ENSG00000144354.14	ENST00000347703.7	2500	9	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	83.8330744694479	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341377	True	NA	15	True	AATAAA	-14	NA	173354819	173368904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_56012.known	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	76.4804897089607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	173341429	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_56013.known	chr2	+	1488	8	FSM	ENSG00000144354.14	ENST00000410019.3	1488	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	251.501450476606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCTTCTAACTTGTT	173341429	True	NA	NA	False	NA	NA	NA	173354871	173368070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_5602.nic	chr1	-	1256	7	NIC	ENSG00000117543.22	novel	1768	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	113.273636238388	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-101021510	True	NA	-23	True	ATTAAA	-16	NA	101025816	100990062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_100990632_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
transcript_56022.nic	chr2	+	1383	4	ISM	ENSG00000144354.14	ENST00000496441.5	2943	8	-39	3815	13	-188	5prime_fragment	FALSE	canonical	3	539	junction_2	101.683605146334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTCTCTTTACTTAAA	173341390	True	NA	NA	False	AAAAAG	-7	NA	173354832	173364685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817
transcript_56024.nnic	chr2	+	1345	3	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_2	2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTAATTTTTTAATT	173532239	True	NA	32	True	AATAAA	-26	NA	173532822	173693680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_173533037_173533205_173533340_173692683
transcript_56026.nnic	chr2	+	1530	2	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTAATTTTTTAATT	NA	False	NA	32	True	AATAAA	-26	NA	173532806	173693680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_173533340_173692683
transcript_56029.known	chr2	+	317	1	FSM	ENSG00000270460.1	ENST00000604994.1	317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	6	True	AATAAA	-22	NA	173811075	173811392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173811100_173811400
transcript_5603.known	chr1	+	1266	6	FSM	ENSG00000233184.8	ENST00000658370.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.06939798987516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACTGTTTTTCTTACA	101025267	True	NA	10	True	AATAAA	-23	NA	101025906	101087268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101080886_101080999_101083460_101083575_101086851
transcript_56039.known	chr2	-	4251	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_10	32.7145227689477	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGACTTTTTTGT	-174238914	True	NA	-10	True	AATAAA	-15	NA	174248532	174072446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_56045.known	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	203.367453117883	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-174238981	True	NA	-4	True	AATAAA	-16	NA	174248599	174075007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
transcript_56050.known	chr2	-	1270	8	FSM	ENSG00000138430.16	ENST00000428402.6	1270	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	250.296069583563	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	-174238857	True	NA	-6	True	AATAAA	-14	NA	174248475	174075009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_56053.known	chr2	-	711	7	FSM	ENSG00000138430.16	ENST00000392560.6	711	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	265.95404782698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAACATACAACTTCCAA	-174124277	True	NA	NA	False	AATAAA	-17	NA	174124315	174075408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174124263
transcript_56061.nnic	chr2	-	1038	5	NNC	ENSG00000138430.16	novel	1656	10	NA	NA	5531	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	307.906235727697	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-174117852	True	NA	-4	True	AATAAA	-16	NA	174118139	174075007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174117982
transcript_56063.known	chr2	-	1918	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	66.8831669756401	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-174393477	True	NA	NA	False	AATAAA	-17	NA	174395712	174348021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_56071.known	chr2	+	3052	8	FSM	ENSG00000144306.15	ENST00000272732.11	3052	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.2162771140106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCAGAATGGTACATT	174395537	True	NA	NA	False	NA	NA	NA	174395729	174429575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174395818_174398274_174398443_174399921_174400104_174400989_174401190_174404102_174404316_174422884_174423048_174424474_174424650_174427712
transcript_56073.known	chr2	+	943	4	FSM	ENSG00000144306.15	ENST00000549848.5	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	8.04155872120988	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATATGGTCAGCTAAT	174409714	True	NA	NA	False	NA	NA	NA	174410081	174427895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174410504_174422884_174423048_174424474_174424650_174427712
transcript_56075.known	chr2	+	658	3	FSM	ENSG00000144306.15	ENST00000475928.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	23.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATTAAACTACGTATA	174410323	False	NA	NA	False	NA	NA	NA	174410343	174428035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174410504_174424474_174424650_174427712
transcript_56077.known	chr2	+	393	2	FSM	ENSG00000226853.4	ENST00000417038.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCCCAGTGTATTA	174487362	True	NA	NA	False	ATTAAA	-19	NA	174487402	174488300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174487530_174488034
transcript_56079.known	chr2	+	561	2	FSM	ENSG00000226853.4	ENST00000444196.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCAATTAATGATCTC	174487348	True	NA	NA	False	AATACA	-41	NA	174487388	174488156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174487828_174488034
transcript_56081.known	chr2	-	553	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-174682516	True	NA	NA	False	NA	NA	NA	174682916	174676336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174676667_174677044_174677125_174682773
transcript_56082.known	chr2	-	1772	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	3.49106001094224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTCTTTGTAATCT	-174682471	True	NA	NA	False	ATTAAA	-20	NA	174682871	174571168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_56083.known	chr2	+	411	1	FSM	ENSG00000235655.3	ENST00000369387.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	174719885	False	NA	NA	False	NA	NA	NA	174719907	174720318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174719900_174720300
transcript_56084.known	chr2	-	3156	13	FSM	ENSG00000128656.15	ENST00000409900.9	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	32.6890866940159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAGATTATTCCAAAA	-175003792	True	NA	NA	False	AATAAA	-16	NA	175005381	174798808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893
transcript_56087.known	chr2	-	2257	8	FSM	ENSG00000128656.15	ENST00000652036.1	2257	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	77.5257692509993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATACTGAGTACTTC	-174847302	True	NA	18	True	NA	NA	NA	174847555	174799338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174821728_174821780_174824433_174824519_174846879
transcript_56088.known	chr2	-	1719	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	60.8661965096475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGTACAACACAGC	-174847343	True	NA	-29	True	AATAAA	-16	NA	174847596	174799511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
transcript_56091.known	chr2	-	2232	7	FSM	ENSG00000128656.15	ENST00000295497.12	2232	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_6	16.7969904711793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	-174847302	True	NA	44	True	ATTAAA	-20	NA	174847555	174799312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879
transcript_56093.known	chr2	-	4164	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	30.8374244313972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTGCTTGTTC	-175163982	True	NA	-9	True	AATAAA	-17	NA	175168203	175072258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56096.known	chr2	-	4079	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	29.8369411226345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-175163985	True	NA	0	True	AATAAA	-26	NA	175168206	175072249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56103.nic	chr2	-	1828	9	ISM	ENSG00000115966.18	ENST00000428760.5	1989	15	-100	38795	-63	725	5prime_fragment	FALSE	canonical	3	96	junction_4	32.3976754567361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGTTTAATGAACATTT	-175168223	False	NA	NA	False	AAAAAG	-1	NA	175168269	175113268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56107.known	chr2	-	1335	8	FSM	ENSG00000115966.18	ENST00000409833.5	1335	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	34.3005920101228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTGCTTTGCTGTGGT	-175163948	True	NA	NA	False	ATTAAA	-15	NA	175168169	175114242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56109.known	chr2	+	497	2	FSM	ENSG00000229750.1	ENST00000449168.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGGCGCGGGTGCAGG	NA	False	NA	NA	False	NA	NA	NA	175167903	175168522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_175167936_175168057
transcript_56112.known	chr2	-	2587	5	FSM	ENSG00000154518.10	ENST00000284727.9	2587	5	0	0	0	0	multi-exon	FALSE	canonical	3	2757	junction_4	390.659938437511	3354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGGTGCTGGTTT	-175152054	True	NA	1	True	AATAAA	-18	NA	175181710	175176257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181467_175181655
transcript_56113.known	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	1565.81081232696	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-175152054	True	NA	65	True	NA	NA	NA	175181710	175178066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
transcript_56117.known	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2757	junction_3	450.582585844889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-175152054	True	NA	-54	True	NA	NA	NA	175181710	175178185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
transcript_56119.known	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_1	130.410463111243	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	-175152007	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
transcript_56121.known	chr2	-	7647	14	FSM	ENSG00000144320.14	ENST00000544803.5	7647	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.9328838082635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATGAAAACCTTATTAAA	-176000490	True	NA	-39	True	AATAAA	-11	NA	176002294	175923896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175940987_175941081_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_56122.known	chr2	-	7542	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	7.81158327954924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTTATCACTCCATA	-176000463	True	NA	-24	True	AATAAA	-26	NA	176002267	175923881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_56129.known	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	NA	False	NA	-50	True	NA	NA	NA	176201252	176200907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_176200900_176201300
transcript_56135.known	chr2	+	1592	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	258.032943633173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	NA	False	NA	12	True	AATAAA	-21	NA	176269394	176338025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_56138.known	chr2	+	1341	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	36.6757564490647	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	176261732	True	NA	12	True	AATAAA	-21	NA	176269441	176338025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_56141.known	chr2	+	817	10	FSM	ENSG00000128654.14	ENST00000452865.1	817	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	215.046133436928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGATCGTGGTAAAG	176261792	True	NA	NA	False	NA	NA	NA	176269501	176337630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329369_176329427_176330583_176330661_176337492
transcript_56150.known	chr2	+	799	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.945346819929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTCTTAACTTTTGA	176261760	True	NA	NA	False	NA	NA	NA	176269469	176337679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_56156.known	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	934.375304682225	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	177142971	True	NA	6	True	AATAAA	-17	NA	177212748	177223958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_56158.known	chr2	+	3028	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1259.97038060424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142963	True	NA	-10	True	AATAAA	-1	NA	177212740	177223942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_56164.known	chr2	+	2067	11	FSM	ENSG00000170144.21	ENST00000392524.6	2067	11	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	491.754857627253	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177212511	True	NA	-18	True	GATAAA	-36	NA	177212562	177220085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_56166.known	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1045.04727644255	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142946	True	NA	-10	True	AATAAA	-1	NA	177212723	177223942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_56170.known	chr2	+	1911	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	1074.22951458243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177212707	True	NA	-18	True	GATAAA	-36	NA	177213265	177220085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_56188.known	chr2	+	1731	10	FSM	ENSG00000170144.21	ENST00000435711.5	1731	10	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	462.598965054112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGATCATTGTTAAT	177142994	True	NA	NA	False	NA	NA	NA	177212771	177219865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246
transcript_56189.known	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	1070.8133749401	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
transcript_56191.known	chr2	+	2926	10	FSM	ENSG00000170144.21	ENST00000677043.1	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_9	1315.17003547915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGTGAATATTTTGA	177142946	True	NA	44	True	NA	NA	NA	177212723	177223898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177222059
transcript_5621.known	chr1	+	1045	5	FSM	ENSG00000233184.8	ENST00000446527.6	1204	5	65	94	9	-22	multi-exon	FALSE	canonical	2	5	junction_1	2.9474565306379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTTATAATGTATAAA	101025279	True	NA	-87	True	NA	NA	NA	101025918	101087171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_56242.known	chr2	-	2446	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2529409729571	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	-177261780	True	NA	-5	True	AATAAA	-21	NA	177264727	177230307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
transcript_56243.known	chr2	-	315	3	FSM	ENSG00000249909.1	ENST00000504253.1	315	3	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGGAAATATGTTATAAG	NA	False	NA	NA	False	NA	NA	NA	178104470	178092502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178092585_178092900_178092965_178104301
transcript_56245.known	chr2	+	1788	10	FSM	ENSG00000155636.15	ENST00000616198.4	1788	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	35.6644166822332	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGACTTATTTATGT	178111337	True	NA	NA	False	AATAAA	-18	NA	178112454	178129653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121173_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129396
transcript_56246.known	chr2	+	1992	9	FSM	ENSG00000155636.15	ENST00000424000.6	1992	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	13.6930639376292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACTTATTTATGTGAA	178111306	True	NA	NA	False	AATAAA	-21	NA	178112423	178129656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123913_178124126_178124291_178125983_178126185_178129396
transcript_56249.known	chr2	-	1885	9	FSM	ENSG00000180228.14	ENST00000677584.1	1885	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	339.657525126413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444664	True	NA	-22	True	AATAAA	-12	NA	178451152	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450241_178450412_178450965
transcript_5625.known	chr1	-	524	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_3	10.4243305140746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATACATTTAATTGT	-101021447	True	NA	NA	False	AATAAA	-22	NA	101025753	101013648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
transcript_56250.known	chr2	-	1616	9	FSM	ENSG00000180228.14	ENST00000424699.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	334.724513592895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCAGGGAACATGAT	-178444663	True	NA	-117	True	NA	NA	NA	178451151	178431653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_56251.known	chr2	-	1713	9	FSM	ENSG00000180228.14	ENST00000676832.1	1713	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	353.157454260844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444665	True	NA	-22	True	AATAAA	-12	NA	178451153	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450365_178450412_178450965
transcript_56254.known	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	267.623326520614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
transcript_56255.known	chr2	-	1645	8	FSM	ENSG00000180228.14	ENST00000678053.1	1645	8	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_5	320.45853627168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444658	True	NA	-22	True	AATAAA	-12	NA	178451146	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365_178450412_178450965
transcript_56256.known	chr2	-	1211	8	FSM	ENSG00000180228.14	ENST00000487082.5	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	274.211969253045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTATCTCCTCATA	-178450754	False	NA	NA	False	NA	NA	NA	178450764	178431965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450561
transcript_56257.known	chr2	-	1770	8	FSM	ENSG00000180228.14	ENST00000325748.9	1770	8	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_2	71.7504177617078	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-178444687	True	NA	-1	True	AATAAA	-33	NA	178451175	178431413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_56267.known	chr2	-	1546	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	267.134173528335	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444654	True	NA	-22	True	AATAAA	-12	NA	178451142	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
transcript_56269.known	chr2	-	1752	7	FSM	ENSG00000180228.14	ENST00000677460.1	1752	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	308.105726803136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	-178451268	False	NA	-27	True	AATAAA	-7	NA	178451278	178431439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_56271.known	chr2	-	1610	7	FSM	ENSG00000180228.14	ENST00000677689.1	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	338.397202510107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450965
transcript_56274.known	chr2	+	1202	6	FSM	ENSG00000204311.15	ENST00000375129.8	1202	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.42928563989645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAATGAATACACCG	178453188	False	NA	NA	False	NA	NA	NA	178453266	178461274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178453621_178454331_178454528_178456009_178456152_178458509_178458628_178460347_178460447_178460981
transcript_56275.known	chr2	-	2209	6	FSM	ENSG00000180228.14	ENST00000678813.1	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	53.2218000447185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATACAAATGAGTAATAT	-178451268	False	NA	NA	False	GATAAA	-35	NA	178451278	178440257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_5628.known	chr1	+	3944	3	FSM	ENSG00000233184.8	ENST00000659528.2	3983	3	39	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTCTTTCAATGTT	101025254	True	NA	NA	False	GATAAA	-38	NA	101025893	101090513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101083460_101083575_101086851
transcript_56280.known	chr2	-	3890	5	FSM	ENSG00000180228.14	ENST00000677806.1	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	30.6838719851325	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACAGGTGAAATTGGT	-178451268	False	NA	NA	False	NA	NA	NA	178451278	178440138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_56283.known	chr2	+	563	4	FSM	ENSG00000223960.8	ENST00000691078.1	1139	4	0	576	0	-112	multi-exon	FALSE	canonical	1	2	junction_2	9.46337971105226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATTTCATTAATGA	178413204	True	NA	NA	False	NA	NA	NA	178413944	178433515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178414114_178426365_178426506_178430769_178430890_178433381
transcript_56286.known	chr2	+	1049	3	FSM	ENSG00000223960.8	ENST00000436616.4	1365	3	316	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCATCAGCCACCT	178413229	True	NA	NA	False	AATAAA	-16	NA	178413969	178434091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178414114_178430694_178430890_178433381
transcript_56287.known	chr2	+	1308	4	FSM	ENSG00000223960.8	ENST00000659708.2	1325	4	17	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	10.3387082795139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCACCTTTTCTTTTTT	178413201	True	NA	NA	False	AATAAA	-26	NA	178413941	178434101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178414114_178426365_178426662_178430769_178430890_178433381
transcript_56288.known	chr2	-	1661	7	FSM	ENSG00000180228.14	ENST00000448279.2	1661	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	285.010331196764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178450474	False	NA	-22	True	AATAAA	-12	NA	178450484	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241
transcript_56289.known	chr2	-	1999	8	FSM	ENSG00000180228.14	ENST00000677206.1	1999	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	349.189440427574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178450751	False	NA	-22	True	AATAAA	-12	NA	178450761	178431434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241
transcript_5629.known	chr1	+	619	2	FSM	ENSG00000233184.8	ENST00000654574.2	634	2	11	4	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	101025217	True	NA	7	True	AATAAA	-20	NA	101025856	101087265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101086851
transcript_56290.known	chr2	-	1824	8	FSM	ENSG00000180228.14	ENST00000677386.1	1824	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	286.168496105468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	-178451268	False	NA	-27	True	AATAAA	-7	NA	178451278	178431439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443289_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_56291.known	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	27.141987768032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	-178477799	True	NA	0	True	AATAAA	-25	NA	178478575	178465598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
transcript_56293.known	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	22.2311093340441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	-178478488	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
transcript_56295.known	chr2	-	1103	3	FSM	ENSG00000079150.19	ENST00000464248.1	1103	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATAGTTGTATATCTC	-178477777	True	NA	NA	False	TATAAA	-40	NA	178478553	178465255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178477061_178477214_178478278
transcript_56298.known	chr2	+	2691	4	FSM	ENSG00000237298.10	ENST00000664161.1	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	178522529	True	NA	NA	False	NA	NA	NA	178523212	178540779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178523637_178535731_178535829_178537603_178537692_178538697
transcript_5630.known	chr1	+	1971	3	FSM	ENSG00000170989.10	ENST00000561748.2	1971	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAGAAATCATAATAAACT	101236507	True	NA	NA	False	AGTAAA	-10	NA	101236898	101243713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101237100_101241688_101241773_101242027
transcript_56300.known	chr2	+	543	1	FSM	ENSG00000271141.1	ENST00000605334.1	543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCGTCAGCGGTGAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	178616580	178617123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178616600_178617100
transcript_56301.known	chr2	-	10671	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_11	10.0131401557427	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGACATTCCTGTCTTT	-179262859	True	NA	NA	False	AATAAA	-33	NA	179264832	179101677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
transcript_56303.known	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	TRUE	canonical	2	211	junction_15	28.2344753017985	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-180000468	True	NA	-73	True	GATAAA	-40	NA	180007113	179945620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_5631.nnic	chr1	-	378	2	NNC	ENSG00000118733.17	novel	2189	6	NA	NA	-105	-20501	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATATTATCTAATATTTA	-101847003	True	NA	-14	True	AATAAA	-18	NA	101847078	101845590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_101845735_101846844
transcript_56313.known	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	81.4803043686019	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	180979270	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_56317.known	chr2	+	501	4	FSM	ENSG00000150722.11	ENST00000479855.1	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	5.90668171555645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGTGATTCTTCT	182030609	False	NA	2	True	ATTAAA	-12	NA	182030882	182117511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182030980_182061441_182061480_182063730_182063792_182117206
transcript_56319.nnic	chr2	+	829	4	NNC	ENSG00000150722.11	novel	501	4	NA	NA	-141	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.694789787469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTGTGTGTGTGTG	182030468	True	NA	10	True	AATAAA	-18	NA	182030741	182117687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_182030980_182061441_182061480_182063730_182063803_182117206
transcript_56321.known	chr2	+	20144	24	FSM	ENSG00000077232.19	ENST00000264065.12	20144	24	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_11	60.5025581799134	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704135	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_56326.known	chr2	+	20086	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	128.153883161519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704133	True	NA	NA	False	AATAAA	-20	NA	182716254	182794464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_56330.known	chr2	+	20006	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_10	117.921286255138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704135	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_56342.known	chr2	-	2637	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.85657137141714	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTATGTTTCCTTCTA	-182866491	True	NA	NA	False	AATAAA	-19	NA	182866637	182833274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
transcript_56344.nic	chr2	-	3204	21	ISM	ENSG00000061676.15	ENST00000360982.2	4989	32	55480	0	-18614	0	3prime_fragment	FALSE	canonical	3	552	junction_15	84.8421328114752	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTAAGATCCTTGGAT	-182983314	False	64	1	True	AATAAA	-28	NA	182983378	182924876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285
transcript_56345.known	chr2	+	5191	4	FSM	ENSG00000162999.13	ENST00000354221.5	5191	4	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGAAGACACACAATT	183078409	True	NA	NA	False	NA	NA	NA	183078746	183100008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_183079160_183083507_183083555_183087039_183087193_183095430
transcript_56351.known	chr2	+	1545	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	31.034003528388	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	183118815	True	NA	27	True	AATAAA	-15	NA	183124442	183161680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_56354.known	chr2	+	998	8	FSM	ENSG00000163002.13	ENST00000374930.7	998	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	126.263249456306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGAAAGAAGCCTTTTT	183118784	True	NA	NA	False	NA	NA	NA	183124411	183161244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_56366.nnic	chr2	+	1406	4	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-96	226814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.8804418757713	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTTGTGGTACTTTGT	185424099	True	NA	6	True	AATAAA	-20	NA	185424966	185732422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_185425508_185434096_185434192_185729348_185729420_185731723
transcript_5637.nic	chr1	+	1942	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	18.2252571998312	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	103525657	103555239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_56371.known	chr2	-	1590	8	FSM	ENSG00000237877.7	ENST00000667839.1	1590	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.02646059593119	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTATTGTACCTAATGA	NA	False	NA	NA	False	AAAAAG	-7	NA	186215093	186032883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_186033803_186038330_186038433_186039499_186039556_186058756_186058970_186081329_186081417_186083153_186083222_186086300_186086371_186215018
transcript_56373.known	chr2	+	2032	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_6	77.3114592307962	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	186478200	True	NA	NA	False	AATAAA	-37	NA	186486259	186509361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
transcript_5638.nic	chr1	+	2020	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	22.0726074581142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103525637	False	NA	NA	False	AATAAA	-21	NA	103525686	103555239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_103525931_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_56383.known	chr2	-	729	3	FSM	ENSG00000064989.13	ENST00000479784.1	729	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGACTTGTCATTT	-187448014	False	NA	NA	False	ATTAAA	-25	NA	187448146	187428336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_187428890_187431296_187431365_187448038
transcript_56386.nic	chr2	-	1448	9	NIC	ENSG00000003436.16	novel	3859	8	NA	NA	-43	193	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	11.9052246933857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTATCAACACGTTTGT	-187564038	True	NA	NA	False	ATTAAA	-19	NA	187565803	187466808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199_187554350_187565549
transcript_56387.nic	chr2	-	1255	9	NIC	ENSG00000003436.16	novel	3859	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	11.9052246933857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAGAAGCA	-187564038	True	NA	NA	False	ATTAAA	-4	NA	187565803	187467001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199_187554350_187565549
transcript_56388.known	chr2	-	3649	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	8.27585620454871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	-187513373	True	NA	NA	False	AGTAAA	-24	NA	187513641	187464229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
transcript_56389.nic	chr2	-	715	3	ISM	ENSG00000003436.16	ENST00000421427.5	804	5	-43	32294	-43	-32159	5prime_fragment	FALSE	canonical	3	44	junction_1	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCATTCTTACC	-187564038	True	NA	-20	True	AATAAA	-18	NA	187565803	187529174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_187529486_187554199_187554350_187565549
transcript_56390.nnic	chr2	-	683	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-57	-60967	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-187564052	True	NA	-7	True	AATAAA	-16	NA	187565817	187557982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_187558398_187565549
transcript_56391.nnic	chr2	+	2411	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-338	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	155	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033346	True	NA	28	True	AATAAA	-17	NA	188033455	188040601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188034061_188035422_188035757_188039129
transcript_56394.nnic	chr2	+	2230	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-337	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_1	59.5	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033347	True	NA	28	True	AATAAA	-17	NA	188033456	188040601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188034061_188035602_188035757_188039129
transcript_56396.nnic	chr2	+	2959	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-317	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	155	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033367	False	NA	28	True	AATAAA	-17	NA	188033476	188040601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188034061_188034853_188035757_188039129
transcript_56399.nnic	chr2	+	2106	2	FSM	ENSG00000289205.1	ENST00000686960.1	1739	2	-367	0	-367	0	multi-exon	FALSE	canonical	3	511	junction_1	0	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033393	True	NA	28	True	AATAAA	-17	NA	188033426	188040601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188034061_188039129
transcript_564.known	chr1	+	719	7	FSM	ENSG00000069424.16	ENST00000663169.1	719	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	13.0085442007252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCCCCTGATCACGTC	6025934	True	NA	NA	False	ATTAAA	-18	NA	6026271	6086366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6086157
transcript_56401.nnic	chr2	-	1337	2	Antisense	novelGene_ENSG00000235616.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTATCGCCTTTTGGAA	NA	False	NA	NA	False	AATAAA	-22	NA	187834043	187790639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_187791911_187833977
transcript_56404.nnic	chr2	-	418	2	Antisense	novelGene_ENSG00000235616.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAATGAAGAATCAGGTT	NA	False	NA	NA	False	AATAAA	-23	NA	187834043	187791558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_187791911_187833977
transcript_56427.known	chr2	+	2643	13	FSM	ENSG00000144366.16	ENST00000409843.5	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	152.555636481325	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188291650	False	NA	34	True	NA	NA	NA	188291668	188595059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_56431.nnic	chr2	+	2614	13	NNC	ENSG00000144366.16	novel	3347	12	NA	NA	4	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.854916688248	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	188286972	True	NA	50	True	NA	NA	NA	188292775	188595075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188293113_188334340_188334468_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_5644.known	chr1	+	2013	15	FSM	ENSG00000185946.16	ENST00000524631.5	2013	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	20.1571631061962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCAGTGTTTTTTTGTTT	103524376	True	NA	NA	False	NA	NA	NA	103525690	103553343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543298_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103553273
transcript_56441.nnic	chr2	+	2543	13	NIC	ENSG00000144366.16	novel	3544	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	170.452991238706	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188286979	True	NA	34	True	NA	NA	NA	188292782	188595059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_188293181_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_56445.known	chr2	+	3294	12	FSM	ENSG00000144366.16	ENST00000409830.6	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	67.2415161013143	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188285736	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_5645.known	chr1	+	2144	15	FSM	ENSG00000185946.16	ENST00000423855.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	10.6849598664168	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103524384	True	NA	NA	False	AATAAA	-21	NA	103525698	103555239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_56454.known	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	80.1356288317778	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	188286634	False	NA	NA	False	AATAAA	-20	NA	188292771	188595931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_56460.known	chr2	+	1932	12	FSM	ENSG00000144366.16	ENST00000409609.5	1932	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	115.932011993921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTTGTGTCTGAGTT	188293778	False	NA	NA	False	NA	NA	NA	188293817	188594281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188294394_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_56463.nic	chr2	+	2349	11	NIC	ENSG00000144366.16	novel	3347	12	NA	NA	4	16	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	131.216767221266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	188286972	True	NA	50	True	NA	NA	NA	188292775	188595075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_56481.known	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.8876563559198	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	188285808	True	NA	NA	False	NA	NA	NA	188291945	188542122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_56490.known	chr2	+	1242	7	FSM	ENSG00000144366.16	ENST00000409637.7	1242	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	103.825842426419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAATAAATATTCTT	188287035	True	NA	-25	True	NA	NA	NA	188292838	188541716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_565.known	chr1	+	448	2	FSM	ENSG00000069424.16	ENST00000655748.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTTTGGTTTTCTTT	5992242	True	NA	NA	False	TATAAA	-23	NA	5992674	6018968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_5992789_6018634
transcript_56514.known	chr2	+	2647	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_13	49.9828970748995	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	189434843	True	NA	25	True	AATAAA	-29	NA	189441473	189475552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_56515.nnic	chr2	+	2645	21	NNC	ENSG00000115368.10	novel	2647	21	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	112.702029706656	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	189434798	True	NA	25	True	AATAAA	-29	NA	189441428	189475552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470122_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_56523.known	chr2	+	2411	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	43.5320571533209	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	189657126	True	NA	65	True	TTTAAA	-6	NA	189661458	189670831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_56527.nic	chr2	+	2468	6	NIC	ENSG00000138381.10	novel	2411	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_2	133.969548778818	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	NA	False	NA	65	True	TTTAAA	-6	NA	189661355	189670831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040_189667597_189667763_189667946_189670440
transcript_5653.known	chr1	+	2621	1	FSM	ENSG00000198890.9	ENST00000370078.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAAACTTTGGTTGTA	107052410	True	NA	13	True	ATTAAA	-22	NA	107056673	107059294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_107056700_107059300
transcript_56532.known	chr2	+	2172	5	FSM	ENSG00000138381.10	ENST00000420250.1	2172	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	160.617558193368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCTGATAAATGTGGAC	189657130	True	NA	NA	False	AATGAA	-3	NA	189661462	189670650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_56533.known	chr2	+	643	4	FSM	ENSG00000286053.2	ENST00000607829.6	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	47.1333804808817	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	189657126	True	NA	9	True	AATAAA	-19	NA	189661458	189666401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040
transcript_56534.known	chr2	+	535	4	FSM	ENSG00000286053.2	ENST00000607690.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	165.175327724479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	189657188	False	NA	9	True	AATAAA	-19	NA	189661520	189666401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040
transcript_56535.known	chr2	+	573	4	FSM	ENSG00000286053.2	ENST00000605941.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	191.483680766795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTACCCAGCCTG	189657119	True	NA	-87	True	NA	NA	NA	189661451	189666305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665356_189665452_189666040
transcript_5654.known	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_8	29.8775277870621	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	-108195386	True	NA	NA	False	AATAAA	-15	NA	108200343	108134042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_56540.nic	chr2	-	2226	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_8	41.342320931462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762029	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762531
transcript_56549.known	chr2	+	508	3	FSM	ENSG00000253559.1	ENST00000520651.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGTATTATTTATGA	NA	False	NA	7	True	AATAAA	-22	NA	189762703	189765556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189762993_189764854_189764976_189765458
transcript_56550.known	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	27.1658678307909	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762029	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_5656.known	chr1	-	1717	9	FSM	ENSG00000162639.16	ENST00000370031.5	1717	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.3846134888376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	-108661018	False	NA	-4	True	AATAAA	-26	NA	108661055	108648294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108649340_108649434_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_56562.known	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	60.2755247914847	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189775955	True	NA	22	True	AATAAA	-18	NA	189784449	189877629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_5657.known	chr1	-	1244	8	FSM	ENSG00000162639.16	ENST00000420055.1	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	11.9863868362303	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGAGGTTGAGAA	-108661143	False	NA	NA	False	NA	NA	NA	108661180	108648799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_56575.known	chr2	+	2576	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	141.254825120541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189776049	True	NA	22	True	AATAAA	-18	NA	189784543	189877629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
transcript_56578.known	chr2	+	2795	12	FSM	ENSG00000064933.19	ENST00000409823.7	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	134.396170252401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATATGTTTAAGAAGAT	189776006	True	NA	-7	True	NA	NA	NA	189784500	189877436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_5658.known	chr1	-	1874	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	13.6426701557867	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	108661526	108648294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
transcript_56582.known	chr2	+	3012	12	FSM	ENSG00000064933.19	ENST00000342075.8	3012	12	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_3	127.515288339597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGATTCTCAAGAACCA	189775994	True	NA	20	True	AATAAA	-16	NA	189784488	189877627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_5659.nic	chr1	-	1569	7	NIC	ENSG00000162639.16	novel	1662	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	22.4251842554055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	-108660849	True	NA	-4	True	AATAAA	-26	NA	108661099	108648294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108660962
transcript_566.known	chr1	+	932	5	FSM	ENSG00000069424.16	ENST00000652845.1	932	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	7.28010988928052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGTTTGTGAAATCAT	6026009	True	NA	NA	False	NA	NA	NA	6026346	6082816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194
transcript_5660.known	chr1	-	822	6	FSM	ENSG00000162639.16	ENST00000493676.1	822	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.7684396635094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGCCAAGGCGGAAAG	-108661027	False	NA	NA	False	NA	NA	NA	108661064	108648893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108657450_108657580_108660962
transcript_56607.known	chr2	+	948	5	FSM	ENSG00000064933.19	ENST00000374826.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	199.008165661613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCATGTTCAAAATAATT	189776013	True	NA	NA	False	ATTAAA	-16	NA	189784507	189806846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189806422
transcript_56611.known	chr2	-	2150	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	373.856590151892	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAACTGAATTCG	-189777337	True	NA	1	True	ATTAAA	-20	NA	189784339	189770266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
transcript_56616.nnic	chr2	-	1209	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	266	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	400.396912450633	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTCTCGTTTTATGTA	-189777050	False	NA	-1	True	ATTAAA	-20	NA	189784052	189771310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
transcript_56622.known	chr2	+	1882	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	69.6036397515724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGTCTTCATTTCA	189775955	True	NA	20	True	ATTAAA	-23	NA	189784449	189807054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
transcript_56626.known	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_3	189.504617357995	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189777362	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
transcript_56629.nnic	chr2	-	1107	4	NNC	ENSG00000128699.14	novel	2009	4	NA	NA	258	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	427.092495836675	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTCTCGTTTTATGTA	-189777058	False	NA	-1	True	ATTAAA	-20	NA	189784060	189771310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783878
transcript_56639.nic	chr2	-	1454	15	NIC	ENSG00000198130.16	novel	2434	14	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	121.009107432592	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTAATGCCTCAT	-190315671	True	NA	-8	True	AATAAA	-21	NA	190319858	190204634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_190204803_190205099_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_56645.known	chr2	-	2434	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_10	34.731088677294	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTCTCCTTCATCCC	-190315639	True	NA	NA	False	AATAAA	-16	NA	190319826	190203919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_56656.known	chr2	-	2463	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	129.499758687034	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTCTCCTTCATCC	-190315703	True	NA	NA	False	AATAAA	-15	NA	190319890	190203920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_56660.nic	chr2	-	1357	13	ISM	ENSG00000198130.16	ENST00000359678.10	2434	14	-32	4756	-32	0	5prime_fragment	FALSE	canonical	3	443	junction_9	35.0428309358705	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCAAACCTGAAAC	-190315671	True	NA	16	True	NA	NA	NA	190319858	190208675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_56666.known	chr2	+	1919	6	FSM	ENSG00000151689.13	ENST00000322522.8	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.57681974534503	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	190343465	True	NA	NA	False	AATAAA	-14	NA	190343569	190371665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_190343962_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_56669.known	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.55350140002175	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	-190534018	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
transcript_56670.known	chr2	+	2360	8	FSM	ENSG00000138386.17	ENST00000409581.5	2360	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	26.9390847230244	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACAGGAAATTTTTAGC	190648444	False	NA	NA	False	GATAAA	-11	NA	190649069	190690919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_190649361_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
transcript_56673.known	chr2	-	4116	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_21	17.4140249192681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	-191010871	True	NA	-6	True	ATTAAA	-17	NA	191014171	190969148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_56675.known	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_19	16.9167260377034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	-191010868	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_56676.known	chr2	-	3937	25	FSM	ENSG00000115415.20	ENST00000673942.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	41.2896274303043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATATAATATGCACAC	-191010861	True	NA	-50	True	ATTAAA	-20	NA	191014161	190969311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986942_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_56678.known	chr2	+	5026	29	FSM	ENSG00000128641.19	ENST00000339514.8	5026	29	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_22	43.7154965985421	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	191245203	False	NA	28	True	CATAAA	-17	NA	191245275	191425389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_56682.known	chr2	+	2269	6	FSM	ENSG00000173559.15	ENST00000425611.9	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	6.97423830966508	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTTTTGCCCTTTCAA	191677753	True	NA	NA	False	AATAAA	-26	NA	191678135	191686943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_56685.known	chr2	-	2799	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.5242829047783	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGCGTGGACTTTA	-192194790	True	NA	NA	False	AATAAA	-22	NA	192194933	191949045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_56688.nnic	chr2	-	496	4	Antisense	novelGene_ENSG00000286358.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	3.74165738677394	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTCAGGTGTGTCTT	-193171024	True	NA	NA	False	ATTAAA	-21	NA	193171194	193132529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_193132652_193160319_193160432_193167259_193167378_193171050
transcript_56690.known	chr2	+	1852	2	FSM	ENSG00000286358.1	ENST00000652985.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAACATAAATTTTTAT	193170086	True	NA	NA	False	NA	NA	NA	193170703	193172765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_193170803_193171012
transcript_56691.known	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_1	63.2410633905331	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	195637549	True	NA	16	True	AATAAA	-20	NA	195657225	195737700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_56694.nic	chr2	+	1640	5	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	28858	0	2166	5prime_fragment	FALSE	canonical	3	889	junction_1	78.582758923316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTATTTTTTATTTA	195637549	True	NA	NA	False	NA	NA	NA	195657225	195708842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655
transcript_56696.nnic	chr2	+	673	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10311	-30483	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	103.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTACTATTCATCA	195582505	True	NA	NA	False	ATTAAA	-21	NA	195586287	195628104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_195586418_195606135_195606234_195627659
transcript_56700.nic	chr2	+	274	2	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	-24	57475	-24	67	5prime_fragment	FALSE	canonical	3	889	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	195637525	True	NA	NA	False	AATGAA	-7	NA	195657201	195680225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031
transcript_56701.nic	chr2	+	592	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	18	57215	10	54	5prime_fragment	FALSE	canonical	3	889	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCATAAATGTGATCCA	195637469	True	NA	NA	False	TTTAAA	-39	NA	195657145	195680487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031
transcript_56702.nic	chr2	+	757	2	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	56968	0	299	5prime_fragment	FALSE	canonical	3	889	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	195637549	True	NA	40	True	AATAAA	-34	NA	195657225	195680732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031
transcript_56704.known	chr2	-	5273	8	FSM	ENSG00000081320.11	ENST00000263955.9	5273	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	5.46976849116476	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCTGAAAACAAGTA	-196170203	True	NA	NA	False	AATAAA	-17	NA	196171578	196133582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196137730_196139619_196139800_196141248_196141298_196143559_196143687_196145910_196146056_196156438_196156652_196163261_196163428_196171332
transcript_56716.known	chr2	+	2113	7	FSM	ENSG00000144395.18	ENST00000471546.5	2113	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	27.5801861245835	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACATTGTCTCATTTG	196637904	True	NA	NA	False	AATACA	-17	NA	196639631	196667934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_196639779_196646340_196646505_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718
transcript_56722.known	chr2	-	4261	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_8	26.4436464200034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGCTGCTCCTTGCT	-196795927	True	NA	-7	True	ATTAAA	-18	NA	196799683	196763034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_56731.known	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_7	17.0948639947792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	-196795903	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_56736.nnic	chr2	-	1514	3	NNC	ENSG00000119041.11	novel	4261	18	NA	NA	-2	-2692	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	125	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGTTGACTAAGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	196799727	196795646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_196796831_196797796_196797909_196799509
transcript_56738.nic	chr2	-	2523	21	ISM	ENSG00000197121.15	ENST00000354764.9	11090	27	7	14456	7	16	5prime_fragment	TRUE	canonical	3	41	junction_5	7.84394671068079	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATATTACTTTCTACT	-196923873	True	NA	NA	False	NA	NA	NA	196926700	196847459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_56742.known	chr2	-	6463	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	0	0	0	0	multi-exon	TRUE	canonical	3	1392	junction_21	209.637170023724	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-197398979	True	NA	NA	False	AATAAA	-17	NA	197435028	197389783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_56743.known	chr2	-	8308	24	FSM	ENSG00000115524.17	ENST00000470268.2	8308	24	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	418.772000804549	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAAAGTCTTAGTAGAC	-197398995	True	NA	NA	False	AATAAA	-9	NA	197435044	197389791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197392462_197392971_197393187_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197420543_197421028_197421134_197423807_197423975_197434971
transcript_56750.nic	chr2	-	1559	11	ISM	ENSG00000115524.17	ENST00000335508.11	6463	25	-51	15352	0	2800	5prime_fragment	FALSE	canonical	3	1392	junction_7	158.378312909312	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAATAATGAAGTT	-197399030	True	NA	7	True	NA	NA	NA	197435079	197405135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_56760.known	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	791.106938093707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	-197399030	True	NA	NA	False	ATTAAA	-15	NA	197435079	197418795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_56762.known	chr2	+	2239	5	FSM	ENSG00000115520.9	ENST00000263960.7	2112	5	-129	2	-70	-2	multi-exon	FALSE	canonical	3	287	junction_2	27.1477439209965	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATCTCCTGTCCTCCT	197449589	True	NA	NA	False	AATATA	-29	NA	197453422	197475308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197453665_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_56765.known	chr2	+	879	4	FSM	ENSG00000115520.9	ENST00000409398.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	145.22013940528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCTAGAATACTGGC	197449659	True	NA	NA	False	NA	NA	NA	197453492	197474168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197453665_197462538_197462732_197470069_197470172_197473756
transcript_56770.known	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	3336	junction_7	2156.01373828402	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466382	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_56771.known	chr2	-	2407	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	0	0	0	multi-exon	FALSE	canonical	1	318	junction_11	3299.24565633213	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197500192	False	161	NA	False	AATAAA	-16	NA	197500221	197486585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
transcript_56772.known	chr2	-	2299	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	239	junction_11	3317.13581520699	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197500245	False	NA	NA	False	AATAAA	-16	NA	197500274	197486585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
transcript_56795.known	chr2	+	3752	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_1	125.478350031113	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	197504321	True	NA	15	True	AGTAAA	-16	NA	197516065	197553699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_56797.known	chr2	+	1447	8	FSM	ENSG00000115540.15	ENST00000409360.1	1447	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	551.618768087275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTACATACAGGATGATC	197504415	False	NA	NA	False	CATAAA	-44	NA	197516159	197551279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516356_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_56800.known	chr2	+	1198	7	FSM	ENSG00000115540.15	ENST00000417097.5	1198	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	580.737079542503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTACCGTTCTGCAACA	197504329	True	NA	NA	False	CATAAA	-19	NA	197516073	197551254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197523623_197523687_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_56802.known	chr2	+	1021	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	491.718641320646	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAGAAATGTTTTCTA	197504302	True	NA	121	True	NA	NA	NA	197516046	197551012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_5681.known	chr1	+	3728	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	140.800982477633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	108686165	True	NA	11	True	ATTAAA	-17	NA	108692340	108701803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_56814.known	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_1	6902.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	197493767	True	NA	-59	True	NA	NA	NA	197500139	197503296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197503038_197503129_197503208
transcript_56816.known	chr2	+	639	3	FSM	ENSG00000115541.11	ENST00000465573.1	639	3	0	0	0	0	multi-exon	FALSE	canonical	2	727	junction_1	7223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAGTGTCTCCAAAATT	197343183	False	NA	26	True	AATAAA	-18	NA	197500542	197503381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500919_197503038_197503129_197503208
transcript_56817.known	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	262.339474726927	2919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	197343019	True	NA	17	True	AATAAA	-14	NA	197500378	197503449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
transcript_56818.known	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	321	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	197343019	True	NA	27	True	AATAAA	-19	NA	197500378	197503382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197501073_197501239_197503038
transcript_56819.known	chr2	+	1130	7	FSM	ENSG00000115540.15	ENST00000409355.2	1130	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	649.68310651339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAAATGAAGCATTAG	197504339	True	NA	51	True	NA	NA	NA	197516083	197551183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197535529_197535606_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_56822.nnic	chr2	+	760	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	27	junction_2	35	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTAGTCT	197577355	True	NA	17	True	ATTAAA	-18	NA	197578669	197587684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_197578923_197580468_197580643_197587351
transcript_56824.nnic	chr2	+	596	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	37.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTGCAACTTGGTTC	197577355	True	NA	10	True	AATAAA	-24	NA	197578669	197614450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_197578923_197580468_197580643_197614281
transcript_56827.known	chr2	+	3027	1	FSM	ENSG00000247626.5	ENST00000282276.8	3027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATCTGTTCTGTTGCA	197703852	True	NA	13	True	ATTAAA	-25	NA	197705368	197708395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197705400_197708400
transcript_56828.known	chr2	+	1663	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	199459697	True	NA	7	True	AATAAA	-20	NA	199459759	199461422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199459800_199461400
transcript_56836.known	chr2	-	5123	8	FSM	ENSG00000162971.11	ENST00000354611.9	5123	8	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_6	31.184768652635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGGGACTTTGTATTG	-199954065	True	NA	-1	True	ATTAAA	-15	NA	199955491	199928912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948317_199948473_199955392
transcript_56837.known	chr2	-	4287	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	27.9985422361047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTATATGCAGAGCT	-199955722	False	NA	NA	False	NA	NA	NA	199955736	199929974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_56863.known	chr2	+	3691	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	199908203	True	NA	17	True	ATTAAA	-18	NA	199911292	199928273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199911772_199925061
transcript_56865.known	chr2	+	1495	6	FSM	ENSG00000162972.11	ENST00000295079.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	132.612819893101	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTACTTACAAATTT	199955306	True	NA	0	True	AATAAA	-11	NA	199955316	199964108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199955337_199955496_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_56866.known	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	314	junction_3	22.3313120975907	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	199955456	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_56871.known	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	315.750120964171	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	200306126	False	NA	14	True	ATTAAA	-15	NA	200306150	200478529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_56875.known	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	254.585611009997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	200292922	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_56880.nic	chr2	+	2085	12	NIC	ENSG00000196141.14	novel	2119	12	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_11	337.051606024904	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200306271	True	NA	15	True	ATTAAA	-16	NA	200306497	200478530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200472993_200477635
transcript_56881.known	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	244.737099627098	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200306297	False	NA	15	True	ATTAAA	-16	NA	200306523	200478530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_56884.nic	chr2	+	2108	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_1	117.768718573228	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200293085	False	NA	15	True	ATTAAA	-16	NA	200306855	200478530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_56898.known	chr2	+	1730	3	FSM	ENSG00000196141.14	ENST00000471601.5	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	405.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCCAG	200292783	True	NA	NA	False	AATGAA	-39	NA	200306553	200390854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200329430_200329481_200389222
transcript_56899.known	chr2	+	1901	3	FSM	ENSG00000196141.14	ENST00000459656.5	1901	3	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	140.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTAGGGCCAGGTG	200292947	True	NA	NA	False	NA	NA	NA	200306717	200390868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306923_200329430_200329481_200389222
transcript_56900.nic	chr2	+	626	2	ISM	ENSG00000196141.14	ENST00000428692.5	541	5	-214	59489	-36	-42397	5prime_fragment	FALSE	canonical	3	201	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCTTTTAAAGACATTC	200306327	False	NA	NA	False	NA	NA	NA	200306339	200329794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200306602_200329430
transcript_56902.known	chr2	+	4478	9	FSM	ENSG00000163535.18	ENST00000357799.9	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	21.7586189819115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATACACAGTTTATTG	200522280	True	NA	NA	False	AATAAA	-17	NA	200526206	200584096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
transcript_56904.nic	chr2	+	1319	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-115	12594	-75	1360	5prime_fragment	FALSE	canonical	3	188	junction_3	14.0435829552939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAATAAAAAAACAAATGAA	200522165	True	NA	NA	False	ATTAAA	-8	NA	200526091	200571502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_56906.nic	chr2	+	1638	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-115	12275	-75	1679	5prime_fragment	FALSE	canonical	3	188	junction_3	14.0435829552939	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAGAATAACAAATG	200522165	True	NA	NA	False	AATAAA	-3	NA	200526091	200571821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_56908.known	chr2	-	2939	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	2.21735578260835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-200509672	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
transcript_56909.known	chr2	-	2556	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	9.48097510221859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-200509672	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
transcript_5691.known	chr1	+	4831	6	FSM	ENSG00000134186.12	ENST00000370025.9	4831	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	60.3973509352852	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAATCTTAAACTTT	108686134	True	NA	46	True	ATTAAA	-20	NA	108692309	108702928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_56915.known	chr2	+	1041	6	FSM	ENSG00000163535.18	ENST00000409203.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	13.9283882771841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTCAATATCTTAGC	200522240	True	NA	NA	False	AATAAA	-13	NA	200526166	200570142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662
transcript_56918.nic	chr2	+	3118	12	NIC	ENSG00000082153.18	novel	1075	9	NA	NA	-7	599	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	439.615590907096	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTATACATCAGTCTTT	200806979	True	NA	0	True	AATAAA	-18	NA	200811538	200823837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_56924.known	chr2	-	2026	13	FSM	ENSG00000013441.17	ENST00000434813.3	2026	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	36.6208046516367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATTTTGTTTGGG	-200863055	False	NA	-130	True	NA	NA	NA	200864561	200853195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864100
transcript_56925.known	chr2	-	1847	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	0	0	0	multi-exon	TRUE	canonical	2	24	junction_9	32.4665426075659	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-200863152	True	NA	57	True	ATTAAA	-14	NA	200864658	200853008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
transcript_56926.nic	chr2	-	1732	12	NIC	ENSG00000013441.17	novel	2026	13	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	30.1462002320318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200862737	False	1506	-15	True	AATAAA	-18	NA	200864243	200853080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864100
transcript_56927.known	chr2	-	1682	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	23.2514106921183	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863150	True	NA	-15	True	AATAAA	-18	NA	200864656	200853080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_56931.known	chr2	-	3208	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	22.277567192133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863185	True	NA	-15	True	AATAAA	-18	NA	200864691	200853080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
transcript_56949.nnic	chr2	-	1135	8	NIC	ENSG00000240344.9	novel	756	7	NA	NA	-27	-53	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	170.122644835173	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	-200889305	False	NA	16	True	AATAAA	-21	NA	200889330	200871008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885261_200885368_200885697_200885773_200887612_200887686_200889243
transcript_56957.known	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	49.6635905087643	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889052	False	NA	55	True	AATGAA	-18	NA	200889077	200870906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
transcript_56960.nic	chr2	-	1422	7	NIC	ENSG00000240344.9	novel	1166	7	NA	NA	-420	-53	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	114.948780864445	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	NA	False	NA	16	True	AATAAA	-21	NA	200889723	200871008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200889243
transcript_56961.known	chr2	-	897	7	FSM	ENSG00000240344.9	ENST00000409361.5	897	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	196.220680753981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGAGCATATTCTTTA	-200889111	False	NA	-88	True	NA	NA	NA	200889136	200871229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885344_200885697_200885773_200887612_200887686_200888948
transcript_56962.known	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	159.45288401977	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889244	False	NA	55	True	AATGAA	-18	NA	200889269	200870906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
transcript_56963.known	chr2	-	756	7	FSM	ENSG00000240344.9	ENST00000409449.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	172.743949886015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTACCAAGGGGCGCCC	-200889278	False	NA	NA	False	NA	NA	NA	200889303	200871266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200889243
transcript_56966.known	chr2	-	725	6	FSM	ENSG00000240344.9	ENST00000409264.6	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	148.145064041972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATAATGATTATCCAA	-200888990	False	NA	-71	True	NA	NA	NA	200889015	200871212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200888955
transcript_56968.known	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	141.903629270008	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	-200889251	False	NA	6	True	ATTAAA	-28	NA	200889276	200870955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
transcript_56969.nic	chr2	-	955	6	NIC	ENSG00000240344.9	novel	756	7	NA	NA	-47	-53	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	168.275250705503	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	NA	False	NA	16	True	AATAAA	-21	NA	200889350	200871008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200889243
transcript_56977.known	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	210.711525405649	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	200881413	True	NA	-8	True	ATTAAA	-27	NA	200889414	200903896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_56979.nnic	chr2	+	1460	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	156.552884213468	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881337	True	NA	21	True	AATAAA	-15	NA	200889338	200903925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_56980.nic	chr2	+	1405	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	159.814128147531	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881341	True	NA	21	True	AATAAA	-15	NA	200889342	200903925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_56984.nic	chr2	+	1619	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	6	junction_1	176.172658365467	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881360	True	NA	21	True	AATAAA	-15	NA	200889361	200903925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889392_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_56985.known	chr2	+	1626	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	144.991666427189	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	200881386	True	NA	26	True	AATAAA	-20	NA	200889387	200903930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_56988.known	chr2	+	1689	7	FSM	ENSG00000196290.17	ENST00000409020.6	1689	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	137.797456031992	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881369	True	NA	21	True	AATAAA	-15	NA	200889370	200903925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200889653_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_56990.nnic	chr2	+	1844	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	10	junction_1	174.715403505879	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881396	True	NA	21	True	AATAAA	-15	NA	200889397	200903925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_57.known	ERCC-00154	+	521	1	FSM	ERCC-00154A	DQ854997	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00154_+_0_500
transcript_57008.known	chr2	+	1269	5	FSM	ENSG00000196290.17	ENST00000409588.1	1269	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	192.241222166319	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200883915	False	NA	21	True	AATAAA	-15	NA	200891916	200903925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
transcript_57011.known	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	22.2791351176767	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	-200954813	True	NA	97	True	AATAAA	-31	NA	200963660	200908976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_5703.nic	chr1	+	2016	4	ISM	ENSG00000134186.12	ENST00000370022.9	1591	5	-23	0	-9	0	intron_retention	TRUE	canonical	3	246	junction_2	66.9527196360735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	108686125	True	NA	NA	False	NA	NA	NA	108692300	108697504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276
transcript_57031.known	chr2	-	9333	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	4.71151218903634	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTTTAT	-201070561	True	NA	1	True	TATAAA	-30	NA	201071669	200973717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
transcript_57032.known	chr2	+	555	4	FSM	ENSG00000119013.10	ENST00000684175.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	840.041797901879	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053191	True	NA	10	True	ATTAAA	-18	NA	201072021	201085750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201073070_201073154_201078880_201079023_201085458
transcript_57034.known	chr2	+	547	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	846.100992133261	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053199	True	NA	10	True	ATTAAA	-18	NA	201072029	201085750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
transcript_57035.known	chr2	+	503	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	851.509378822231	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	201053177	True	NA	4	True	ATTAAA	-12	NA	201072007	201085744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
transcript_57040.known	chr2	+	493	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_1	208.5	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053170	True	NA	10	True	ATTAAA	-18	NA	201072000	201085750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201078880_201079023_201085458
transcript_57042.known	chr2	+	739	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	887	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCTGCTTTTGTCATT	201053221	True	NA	5	True	ATTAAA	-13	NA	201072051	201085745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072362_201078880_201079023_201085458
transcript_57043.known	chr2	+	1548	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	850	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGCCAATCTG	201053193	True	NA	-6	True	ATTAAA	-2	NA	201072023	201085734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201073154_201078880_201079023_201085458
transcript_57045.known	chr2	+	1283	6	FSM	ENSG00000003402.21	ENST00000341222.10	1283	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.60302960768767	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201116022	True	NA	17	True	AATAAA	-17	NA	201116166	201141598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57046.nic	chr2	+	1457	6	NIC	ENSG00000003402.21	novel	2128	10	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	20.1891059732718	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201118362	False	NA	17	True	AATAAA	-17	NA	201118412	201141598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57047.nic	chr2	+	1032	5	NIC	ENSG00000003402.21	novel	1283	6	NA	NA	-154	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	25.8505319094211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	NA	False	NA	17	True	AATAAA	-17	NA	201115999	201141598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_201116482_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57048.nnic	chr2	+	520	3	NNC	ENSG00000003402.21	novel	1091	6	NA	NA	-382	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	NA	False	NA	17	True	AATAAA	-17	NA	201139803	201141598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_201140016_201140356_201140440_201141373
transcript_57049.known	chr2	+	529	2	FSM	ENSG00000003402.21	ENST00000490965.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAATGCCTCCTTGCCT	201118501	False	NA	3	True	ATTAAA	-14	NA	201118522	201119177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201118902_201119027
transcript_57050.known	chr2	+	2911	3	FSM	ENSG00000064012.23	ENST00000490682.5	2911	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACATGGATGAATCTTG	201233171	True	NA	NA	False	TATAAA	-23	NA	201233464	201242925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201233623_201234015_201234113_201240269
transcript_57052.known	chr2	-	6389	16	FSM	ENSG00000115993.13	ENST00000332624.8	6389	16	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_5	6.09334792120792	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCCTGTGTCTTTG	-201449246	True	NA	0	True	AATAAA	-22	NA	201451458	201377206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201381219_201384110_201384217_201386217_201386485_201387702_201388002_201389299_201389504_201389800_201389881_201392908_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_57056.known	chr2	+	2222	12	FSM	ENSG00000082146.13	ENST00000194530.8	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_9	26.9808625167684	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	201448477	True	NA	12	True	AATAAA	-16	NA	201451739	201480846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480031
transcript_57058.known	chr2	+	616	4	FSM	ENSG00000082146.13	ENST00000415688.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	133.209942905509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCCAAGTACATCT	201478137	True	NA	NA	False	NA	NA	NA	201478149	201480523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201478192_201478562_201478602_201479488_201479532_201480031
transcript_57066.known	chr2	-	5592	13	FSM	ENSG00000155755.20	ENST00000409444.6	5592	13	0	0	0	0	multi-exon	TRUE	canonical	1	24	junction_11	122.258009280919	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTCTGTTTGCATTT	-201642705	False	NA	-5	True	AATAAA	-20	NA	201642944	201620183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640260_201640266_201640892_201640925_201642608
transcript_5707.known	chr1	+	2043	5	FSM	ENSG00000134186.12	ENST00000467302.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	159.474919658233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	108686151	True	NA	NA	False	NA	NA	NA	108692326	108697504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276
transcript_57084.known	chr2	-	1824	12	NNC	ENSG00000155755.20	novel	5592	13	NA	NA	-22	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	112.233890964324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTATATAACCTAAAT	-201639335	True	NA	89	True	AATAAA	-23	NA	201642692	201623699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639051_201640892_201640925_201642608
transcript_57085.known	chr2	-	6675	34	FSM	ENSG00000003393.16	ENST00000264276.11	6675	34	0	0	0	0	multi-exon	TRUE	canonical	1	37	junction_23	20.5259136535534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCGTTATTTTTTTTC	-201778322	True	NA	NA	False	AATAAA	-16	NA	201780933	201700266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57086.known	chr2	-	3148	13	FSM	ENSG00000003393.16	ENST00000482789.6	3148	13	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_2	25.1462389500564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCATTTTATGAAACT	-201781124	False	NA	-23	True	AATAAA	-2	NA	201781158	201733049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57088.known	chr2	-	2677	4	FSM	ENSG00000003393.16	ENST00000467448.5	2677	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	10.6249183003395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGTGTTTCTATTA	-201778345	True	NA	NA	False	ATTAAA	-16	NA	201780956	201759456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57090.known	chr2	-	768	1	FSM	ENSG00000273209.1	ENST00000608741.1	768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGGGTTATCCTCGTT	-202033350	True	NA	-25	True	ATTAAA	-16	NA	202033537	202032769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202032800_202033500
transcript_57091.known	chr2	+	4587	1	FSM	ENSG00000155760.3	ENST00000286201.3	4587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTTATTTAGTTTAC	202020658	True	NA	6	True	AATAAA	-18	NA	202033854	202038441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_202033900_202038400
transcript_57098.known	chr2	-	1187	6	FSM	ENSG00000116030.17	ENST00000409368.5	1187	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2432.05126590703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCTAATTTTCATTAG	-202201197	True	NA	NA	False	AAGAAA	-45	NA	202238594	202206649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202207322_202207867_202208003_202210734_202210807_202214356_202214435_202220031_202220107_202238439
transcript_57099.known	chr2	-	1071	6	FSM	ENSG00000116030.17	ENST00000392245.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	1922.20119654525	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTTACTGGATTTT	-202201202	True	NA	-17	True	AATAAA	-11	NA	202238599	202206186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202206804_202207252_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
transcript_57103.known	chr2	-	722	6	FSM	ENSG00000116030.17	ENST00000409627.6	722	6	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	2439.06421399684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTGGTAATTTGAAT	-202201169	True	NA	NA	False	NA	NA	NA	202238566	202207141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202231542_202231733_202238439
transcript_57107.known	chr2	-	534	5	FSM	ENSG00000116030.17	ENST00000409205.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	1824.88525324197	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACGTGTGCACAGA	-202201065	True	NA	NA	False	NA	NA	NA	202238462	202207030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202207322_202210734_202210807_202214356_202214430_202220031_202220107_202238439
transcript_57114.known	chr2	-	831	4	FSM	ENSG00000116030.17	ENST00000392244.7	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_3	1548.81230481797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGGTTGAAGTCAAGA	-202201169	True	NA	NA	False	TTTAAA	-30	NA	202238566	202206767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202238439
transcript_57117.known	chr2	-	761	4	FSM	ENSG00000116030.17	ENST00000409712.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2411.02610705253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAACTGAACTGTGGAAA	-202201179	True	NA	NA	False	NA	NA	NA	202238576	202206850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202207322_202214356_202214435_202220031_202220107_202238439
transcript_5712.nic	chr1	+	832	3	ISM	ENSG00000143107.10	ENST00000370017.9	3090	13	-90	24339	-90	-23646	5prime_fragment	FALSE	canonical	3	11	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCATTACTGAAATTGAT	108712666	True	NA	4	True	AATAAA	-19	NA	108712817	108718410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_108712997_108713510_108713530_108717776
transcript_57154.known	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1102	junction_3	125.403023756794	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	202247426	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
transcript_5716.known	chr1	+	2489	19	FSM	ENSG00000116266.11	ENST00000370008.4	2489	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	73.6253445358641	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	108742256	True	NA	1	True	AATAAA	-17	NA	108746673	108809523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
transcript_57164.nic	chr2	+	1771	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-53	604	-26	-376	5prime_fragment	FALSE	canonical	3	1102	junction_3	114.682066302282	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTTTTTAATTAT	202247373	True	NA	6	True	NA	NA	NA	202265709	202303057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_5718.nnic	chr1	+	2352	18	NIC	ENSG00000116266.11	novel	2489	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	96.3408381395221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	108742244	True	NA	1	True	AATAAA	-17	NA	108746661	108809523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108808782
transcript_57198.known	chr2	-	879	4	FSM	ENSG00000163596.17	ENST00000425178.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTCATTATACATT	NA	False	NA	NA	False	AATAAA	-23	NA	202829234	202819604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202819900_202821357_202821482_202825694_202825768_202828847
transcript_57200.known	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_8	44.0331314655983	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-202911650	False	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_57213.nic	chr2	-	1582	6	ISM	ENSG00000138442.11	ENST00000261015.5	8068	13	-235	21263	-235	474	5prime_fragment	FALSE	canonical	3	698	junction_1	45.1911495759955	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGAAATGAAGT	-202910755	True	NA	NA	False	NA	NA	NA	202911908	202895523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_57217.known	chr2	+	2854	8	FSM	ENSG00000138380.18	ENST00000444724.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3.01695886884898	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGAGGTGGCGG	202911838	True	NA	NA	False	AATACA	-6	NA	202912254	202963168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236
transcript_57219.nic	chr2	+	849	5	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-179	5984	25	0	5prime_fragment	FALSE	canonical	1	2	junction_4	4.32290411644765	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAGGTGTGAACTAAT	203014728	False	NA	-1	True	NA	NA	NA	203014745	203056504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426
transcript_57221.known	chr2	+	521	3	FSM	ENSG00000144426.19	ENST00000683927.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGCTTTTCATTTT	203013832	True	NA	NA	False	AATAAA	-13	NA	203014878	203016735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203014983_203016155_203016436_203016598
transcript_57223.known	chr2	+	10552	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	29.698484809835	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	203237128	True	NA	15	True	AATATA	-35	NA	203239017	203306026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57228.known	chr2	+	1730	12	FSM	ENSG00000119004.17	ENST00000449301.5	1730	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	46.5946118262581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAATCATGTTTGTT	203237087	True	NA	17	True	AAAAAG	-17	NA	203238976	203297242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57229.known	chr2	+	2636	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	46.8350366836306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	203237137	True	NA	NA	False	NA	NA	NA	203239026	203298286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_5723.nic	chr1	+	1146	9	ISM	ENSG00000116266.11	ENST00000370008.4	2489	19	-68	29908	-68	-1927	5prime_fragment	FALSE	canonical	3	231	junction_5	25.5147016443461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTTGGTGTGTTTGCT	108742188	True	NA	NA	False	ATTAAA	-22	NA	108746605	108779615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285
transcript_57230.known	chr2	+	1359	11	FSM	ENSG00000119004.17	ENST00000461371.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.8164687941451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	203237092	True	NA	4	True	TATAAA	-24	NA	203238981	203297014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57236.known	chr2	+	1812	13	FSM	ENSG00000119004.17	ENST00000429815.6	1812	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	49.251903516514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGCAGAAGTTG	203237092	True	NA	1	True	AAAAAG	-1	NA	203238981	203297226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272645_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57237.known	chr2	+	6567	12	FSM	ENSG00000138443.17	ENST00000261018.12	6567	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.199458534324	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	203317231	True	NA	15	True	AATAAA	-16	NA	203328393	203432169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203382188_203382207_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_57238.nnic	chr2	+	1663	11	NNC	ENSG00000138443.17	novel	6484	10	NA	NA	18	29	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_10	126.865322291003	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAGGTATAACAGCAT	203317137	True	NA	17	True	AATAAA	-18	NA	203328299	203427598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176_203427270_203427495
transcript_57243.known	chr2	+	2240	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	161.901204442709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	203317232	True	NA	NA	False	NA	NA	NA	203328394	203427948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
transcript_57244.known	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_8	87.5468128742814	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	203317117	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_57245.nnic	chr2	+	1576	10	NNC	ENSG00000138443.17	novel	1567	11	NA	NA	18	29	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_9	132.06713593874	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAGGTATAACAGCAT	203317137	True	NA	17	True	AATAAA	-18	NA	203328299	203427598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176_203427270_203427495
transcript_57248.nic	chr2	+	1773	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	85.5537111994564	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	203317137	True	NA	-12	True	NA	NA	NA	203328299	203427569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_5725.known	chr1	+	7152	15	FSM	ENSG00000121957.15	ENST00000264126.9	7152	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	13.7137276672177	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGTTGAAGTTGGCA	108874907	True	NA	NA	False	AGTAAA	-23	NA	108876984	108934545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
transcript_57256.known	chr2	+	752	2	FSM	ENSG00000227946.2	ENST00000420509.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTAATATTTTTTT	206084432	True	NA	NA	False	NA	NA	NA	206084604	206086564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206084749_206085956
transcript_57257.known	chr2	-	11660	19	FSM	ENSG00000023228.14	ENST00000233190.11	11660	19	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_16	51.8169856321265	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGATCAATTAACATG	-206148614	True	NA	-16	True	AATAAA	-17	NA	206159444	206114816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_57262.known	chr2	-	2631	18	FSM	ENSG00000023228.14	ENST00000423725.5	2631	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	117.161645648534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGATTTAAGCACC	-206148679	True	NA	-19	True	ATTAAA	-21	NA	206159509	206123818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206153617_206153683_206159340
transcript_57267.known	chr2	-	2394	18	FSM	ENSG00000023228.14	ENST00000440274.5	2394	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	120.262573168839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATTGATAACCTTTGT	-206148595	True	NA	-49	True	NA	NA	NA	206159425	206123955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206152418_206152511_206153617_206153683_206159340
transcript_57274.known	chr2	-	2080	16	FSM	ENSG00000023228.14	ENST00000432169.5	2080	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	127.885087307143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATAATT	-206148595	True	NA	-43	True	NA	NA	NA	206159425	206124100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206153617_206153683_206159340
transcript_57282.known	chr2	+	912	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1913.44026106201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	206145892	True	NA	-98	True	GATAAA	-6	NA	206159635	206162801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57286.known	chr2	+	844	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_1	1181.22315372197	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206159566	False	NA	29	True	AATAAA	-15	NA	206159584	206162928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57288.known	chr2	+	880	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	1381.82857917407	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	206145850	True	NA	28	True	AATAAA	-14	NA	206159593	206162927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57299.known	chr2	+	701	3	FSM	ENSG00000114942.14	ENST00000479587.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_1	1556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTAAATCATAGTGAG	206145871	True	NA	NA	False	AATGAA	-26	NA	206159614	206161117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159958_206160060_206160587
transcript_57301.known	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3767	junction_2	219.069304102606	2354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206145467	True	NA	29	True	AATAAA	-15	NA	206159894	206162928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57302.known	chr2	-	572	2	FSM	ENSG00000183671.13	ENST00000621141.5	2025	2	-67	1520	-67	-123	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCCATCCTGTCTTA	-206213402	False	NA	NA	False	NA	NA	NA	206213438	206176835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206177276_206213306
transcript_57305.known	chr2	-	1757	11	FSM	ENSG00000138400.13	ENST00000449792.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	5.14684369298311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACATTAAAATAGAGTT	-206764957	True	NA	NA	False	NA	NA	NA	206765326	206738224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206738512_206739592_206739662_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206765249
transcript_57308.nic	chr2	-	1509	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-42	16210	0	2152	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGGATTATGATATCT	-206764959	True	NA	NA	False	AATAAA	-24	NA	206765328	206754466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_57309.nic	chr2	-	1204	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-42	16515	0	1847	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	-206764959	True	NA	-16	True	AATAAA	-18	NA	206765328	206754771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_5731.known	chr1	-	4994	13	FSM	ENSG00000121940.17	ENST00000369969.7	4994	13	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_12	48.9268160964244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAAATTTTTCCTTT	-108961175	True	NA	NA	False	AAGAAA	-19	NA	108963484	108929504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
transcript_57317.known	chr2	+	3188	12	FSM	ENSG00000118246.14	ENST00000236980.10	3188	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	73.6063912065133	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGGACTATTTTTTC	NA	False	NA	24	True	ATTAAA	-28	NA	206765356	206792509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206765655_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_57322.known	chr2	+	6712	12	FSM	ENSG00000118246.14	ENST00000402774.8	6712	12	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	62.202149786133	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAATTTTGCTTTTA	206760663	True	NA	9	True	AATAAA	-23	NA	206765605	206796189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206765748_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_57327.known	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	118.789417120528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	206760663	True	NA	-7	True	AATAAA	-4	NA	206765605	206791806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_57332.nnic	chr2	-	716	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	19	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-206812260	False	NA	-2	True	AATAAA	-18	NA	206812283	206806879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206810036_206810139_206812028
transcript_57334.nnic	chr2	-	768	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	21.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-206812195	True	NA	-2	True	AATAAA	-18	NA	206812278	206806879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206810036_206810196_206812028
transcript_57336.nnic	chr2	-	613	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	77	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-206812199	True	NA	-2	True	AATAAA	-18	NA	206812282	206806879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206812028
transcript_57340.nic	chr2	-	2038	5	NIC	ENSG00000118263.15	novel	1788	5	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	9.80752262296652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATATCCCTTGAGC	-207165767	False	76	NA	False	AATAAA	-16	NA	207166051	207080360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466_207165707_207165912
transcript_57341.known	chr2	-	8365	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTAGTGTGACTGAA	-207165373	True	NA	NA	False	AATAAA	-16	NA	207165948	207074136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
transcript_57356.known	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	53.7864701853542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	207520014	True	NA	10	True	CATAAA	-18	NA	207529891	207603431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_57369.known	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.463605704947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	207529719	False	NA	NA	False	ATTAAA	-15	NA	207529736	207597789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_5737.known	chr1	-	1937	12	FSM	ENSG00000121940.17	ENST00000674849.1	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.5249823043032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCAATATGTCATTAA	-108961116	True	NA	-57	True	NA	NA	NA	108963425	108932336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
transcript_57377.known	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	33.5577479724071	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	207520084	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_5738.known	chr1	-	4803	12	FSM	ENSG00000121940.17	ENST00000356970.6	4803	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	29.8445005801074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATAAAATTTTTCC	-108961148	True	NA	NA	False	AAGAAA	-16	NA	108963457	108929507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
transcript_57385.nic	chr2	+	1483	7	ISM	ENSG00000118260.15	ENST00000353267.8	10095	8	-53	27923	-14	0	5prime_fragment	FALSE	canonical	3	121	junction_3	35.4494945897211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTGGCCAGTTCATG	207520031	True	NA	NA	False	ATTAAA	-21	NA	207529908	207578065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504
transcript_5739.known	chr1	-	1896	12	FSM	ENSG00000121940.17	ENST00000675956.1	1896	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	49.230945048955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGACTAGCCAATAT	-108961118	True	NA	-65	True	NA	NA	NA	108963427	108932344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963400
transcript_57390.known	chr2	-	869	5	FSM	ENSG00000144401.14	ENST00000432416.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	272.649385658578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGGATTACAATCTTT	-207625073	False	NA	-1	True	AATAAA	-23	NA	207625121	207580630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207580999_207581793_207581947_207621805_207621918_207624228_207624405_207625061
transcript_57393.nic	chr2	-	2453	5	NIC	ENSG00000144401.14	novel	1103	4	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	67	junction_1	243.667165412166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTCTGTGATATACC	-207618748	True	NA	-5	True	AATAAA	-17	NA	207625401	207609113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_207609766_207612067_207613444_207621805_207621918_207624228_207624405_207625264
transcript_57396.nic	chr2	-	1200	5	NIC	ENSG00000144401.14	novel	1210	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	285.369059289896	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTAAATGAGTAAGCTT	-207618748	True	NA	-11	True	AATAAA	-39	NA	207625401	207612722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_207613444_207620640_207620695_207621805_207621918_207624228_207624405_207625264
transcript_57399.nic	chr2	-	1019	4	NIC	ENSG00000144401.14	novel	1366	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	270.648603666575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGTTGTATATAGTTG	-207618748	True	NA	0	True	AATAAA	-24	NA	207625401	207581352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_207581947_207621805_207621918_207624228_207624405_207625264
transcript_57400.known	chr2	-	869	4	FSM	ENSG00000144401.14	ENST00000425132.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	269.747206761359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGATTAGAGAAAGCTG	-207618726	True	NA	NA	False	GATAAA	-22	NA	207625379	207581694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207582161_207621805_207621918_207624228_207624405_207625264
transcript_57406.known	chr2	-	4805	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	247.242121546201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-207625201	False	NA	-6	True	AATAAA	-16	NA	207625249	207609114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
transcript_57407.known	chr2	-	1103	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_3	84.0991478355558	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	-207618725	True	NA	-31	True	AATAAA	-19	NA	207625378	207612742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
transcript_57408.known	chr2	-	1003	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	292.896265292377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATTTAATGAAATGTCT	-207625788	True	NA	NA	False	NA	NA	NA	207625927	207612979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
transcript_57415.known	chr2	+	3813	10	FSM	ENSG00000163249.13	ENST00000295414.8	3813	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	22.7259573132238	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	207708350	True	NA	NA	False	AATAAA	-18	NA	207711639	207756174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_57418.known	chr2	+	2619	8	FSM	ENSG00000163249.13	ENST00000339882.9	2619	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	60.6498818075131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGTCTGTAGTCCC	207711724	False	NA	NA	False	AATAAA	-16	NA	207711750	207755244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_57420.nnic	chr2	-	710	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	-89	0	-89	0	multi-exon	TRUE	canonical	3	27	junction_2	12	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	-208112711	False	NA	-6	True	AATAAA	-24	NA	208112741	208108157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208108497_208112265_208112509_208112613
transcript_57422.known	chr2	-	423	2	FSM	ENSG00000229150.2	ENST00000689457.1	729	2	143	163	3	-84	multi-exon	FALSE	canonical	3	51	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGGCCGGGGGACTG	-208112478	False	NA	NA	False	NA	NA	NA	208112508	208108316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208108497_208112265
transcript_57423.known	chr2	-	642	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	22.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	-208124226	True	NA	-3	True	AATAAA	-24	NA	208124524	208121606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208121946_208124111_208124355_208124464
transcript_57424.known	chr2	-	631	3	FSM	ENSG00000182187.4	ENST00000260988.5	631	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAGAGCCCTGTCTTTC	-208146095	True	NA	-2	True	AATAAA	-24	NA	208146158	208142572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208142914_208145773_208146017_208146111
transcript_57432.known	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	1617.52815534486	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	-208254439	False	NA	-9	True	ATTAAA	-16	NA	208254458	208236231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
transcript_57433.known	chr2	-	2318	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	0	0	0	multi-exon	FALSE	canonical	3	4389	junction_1	459.440239131634	3015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCGTTTCTGTTTA	-208197551	True	NA	-6	True	ATTAAA	-19	NA	208255071	208236228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
transcript_57455.known	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	4760	junction_3	346.95276655796	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	-208197541	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
transcript_57457.known	chr2	-	556	3	FSM	ENSG00000138413.14	ENST00000481557.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	4760	junction_2	334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGGGA	-208197593	True	NA	NA	False	TTTAAA	-2	NA	208255113	208251260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208251568_208253885_208253960_208254938
transcript_57460.known	chr2	+	464	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	33	0	33	0	multi-exon	FALSE	canonical	3	99	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCTTGTATATTGCT	208254819	True	NA	26	True	AATAAA	-31	NA	208255246	208256181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_208255432_208255902
transcript_57461.known	chr2	+	489	2	FSM	ENSG00000231908.2	ENST00000448588.1	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAGGACAATAGCATG	208254972	False	NA	13	True	AATAAA	-18	NA	208255399	208256168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_208255623_208255902
transcript_57462.known	chr2	+	2752	13	FSM	ENSG00000144407.10	ENST00000272847.7	2752	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11492401335497	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGATCACTTTTTAA	208406769	True	NA	NA	False	ATTAAA	-18	NA	208406791	208494506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_208407119_208428200_208428304_208437536_208437648_208437759_208437882_208442363_208442462_208443347_208443538_208444733_208444888_208450748_208450810_208459894_208459962_208481069_208481165_208489011_208489151_208490638_208490681_208493263
transcript_57464.known	chr2	+	2038	12	FSM	ENSG00000078018.21	ENST00000361559.8	2038	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.04532614175912	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTGTTACAATTTTCTA	209579366	True	NA	9	True	AATAAA	-22	NA	209579430	209730523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_209579756_209580035_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209705579_209705728_209709913_209710255_209725708_209725791_209729849_209729963_209730181
transcript_57473.known	chr2	+	1128	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	248.276335740821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCATATTAGCTACACTA	209993471	True	NA	NA	False	NA	NA	NA	210002583	210020100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_57476.known	chr2	+	925	7	FSM	ENSG00000197713.15	ENST00000429907.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	276.614452904319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	209993529	True	NA	8	True	ATTAAA	-18	NA	210002641	210019940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210018152_210018222_210019668
transcript_57485.known	chr2	+	2130	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	275.29402463548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	209993515	True	NA	NA	False	AATAAA	-17	NA	210002627	210021226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_57488.known	chr2	+	858	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	239.187457865165	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993544	True	NA	29	True	ATTAAA	-39	NA	210002656	210019961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
transcript_5749.known	chr1	+	555	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	108992281	108992836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108992300_108992800
transcript_5750.nnic	chr1	-	1395	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061684	True	NA	-4	True	AATAAA	-32	NA	109076014	109062485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063057_109064140_109064694_109066134_109066233_109074986_109075066_109075920
transcript_57501.known	chr2	+	796	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	255.417672646197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993530	True	NA	29	True	ATTAAA	-39	NA	210002642	210019961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_57507.known	chr2	+	426	5	FSM	ENSG00000197713.15	ENST00000438191.1	426	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	302.080287340965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCAGATAGATATGGCC	209993537	True	NA	NA	False	NA	NA	NA	210002649	210016558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002773_210003437_210003469_210009656_210009737_210015972_210016113_210016506
transcript_5751.nnic	chr1	-	1830	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061684	True	NA	-4	True	AATAAA	-32	NA	109076014	109062485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063492_109064140_109064694_109066134_109066233_109074986_109075066_109075920
transcript_57510.known	chr2	+	792	6	FSM	ENSG00000197713.15	ENST00000411934.6	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	306.589888939606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993543	True	NA	29	True	ATTAAA	-39	NA	210002655	210019961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002773_210003437_210003458_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_57512.known	chr2	-	4592	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	39.7690865737897	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	-210471825	True	NA	-7	True	AATAAA	-18	NA	210476759	210431250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
transcript_57513.known	chr2	-	1270	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	87.1020403440629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAGCATGCCACCTGC	-210476396	False	NA	NA	False	NA	NA	NA	210476775	210434486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
transcript_57518.known	chr2	-	4503	10	FSM	ENSG00000115365.12	ENST00000441020.7	4503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.1243316706434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-210471823	True	NA	-5	True	AATAAA	-20	NA	210476757	210431248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476708
transcript_57519.known	chr2	-	1647	10	FSM	ENSG00000115365.12	ENST00000233714.8	1647	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.1243316706434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTATTATTGGGTA	-210471771	True	NA	NA	False	GATAAA	-7	NA	210476705	210434114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476646
transcript_57521.known	chr2	+	1250	5	FSM	ENSG00000144451.20	ENST00000432529.6	1250	5	0	0	0	0	multi-exon	TRUE	canonical	3	314	junction_3	27.0774352552083	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATACTGTTTTCCAT	213279680	True	NA	37	True	AATAAA	-21	NA	213284391	213317978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218
transcript_57525.known	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	22.0320221495894	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	-214805375	True	NA	-9	True	AATAAA	-18	NA	214809683	214725645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
transcript_57527.known	chr2	-	2261	10	FSM	ENSG00000138376.11	ENST00000455743.5	2261	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	53.3252308660129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGCTTCCTCTTG	-214805365	True	NA	NA	False	NA	NA	NA	214809673	214728703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214797060_214797118_214809411
transcript_57528.known	chr2	-	1456	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	52.3810822509213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATACCAGATGAACA	-214805334	True	NA	-118	True	NA	NA	NA	214809642	214728676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
transcript_5753.nnic	chr1	-	1835	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061684	True	NA	-4	True	AATAAA	-32	NA	109076014	109062485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063497_109064140_109064694_109066134_109066233_109074986_109075066_109075920
transcript_57530.nic	chr2	-	765	4	ISM	ENSG00000138376.11	ENST00000613706.5	2131	11	-28	52666	-28	-354	5prime_fragment	FALSE	canonical	3	131	junction_1	19.7989898732233	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTTTAGCTGAAATCA	-214805403	True	NA	NA	False	AAAAAG	-33	NA	214809711	214781250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_214781510_214792296_214792446_214797060_214797118_214809411
transcript_57534.known	chr2	+	2089	3	FSM	ENSG00000229267.3	ENST00000664818.1	2089	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCATCATCTGATAC	214810120	True	NA	NA	False	NA	NA	NA	214810216	214963565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_214810433_214833988_214834106_214961809
transcript_5754.nnic	chr1	-	1835	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.779030568655	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061684	True	NA	-4	True	AATAAA	-32	NA	109076014	109062485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063502_109064145_109064694_109066134_109066233_109074986_109075066_109075920
transcript_57544.known	chr2	+	1972	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_10	83.6645683667824	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGTTTTTGGTAGTTG	215296693	True	NA	27	True	AATAAA	-23	NA	215312058	215349764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_5755.nnic	chr1	-	1585	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATCTGACTGATTTGT	-109061684	True	NA	-10	True	AATAAA	-26	NA	109076014	109062491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063154_109064041_109064694_109066134_109066233_109074986_109075066_109075920
transcript_57572.known	chr2	+	2275	15	FSM	ENSG00000138363.15	ENST00000435675.5	2275	15	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_9	86.5713401696861	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	215296725	True	NA	26	True	AATAAA	-22	NA	215312090	215349763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_57574.known	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.5772031507773	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-216080276	True	NA	-1	True	TATAAA	-37	NA	216081809	216038387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
transcript_5758.known	chr1	-	814	4	FSM	ENSG00000197780.11	ENST00000338366.6	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGGCTGGAGTGCA	-109061673	True	NA	NA	False	NA	NA	NA	109076003	109064139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109064694_109066134_109066233_109074986_109075066_109075920
transcript_57580.nnic	chr2	-	2043	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	204	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCGTATTGTTTTACT	-216010480	False	NA	-19	True	AATAAA	-15	NA	216013347	215942802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_57581.nnic	chr2	-	2040	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	204	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCGTATTGTTTTACT	-216010480	False	NA	-19	True	AATAAA	-15	NA	216013347	215942802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_57582.known	chr2	-	3148	5	FSM	ENSG00000118242.16	ENST00000263268.11	3148	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	4.63680924774785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTGTGTTATATTT	-216010684	True	NA	-1	True	ATTAAA	-23	NA	216013551	215942583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_5759.known	chr1	+	2769	3	FSM	ENSG00000215717.7	ENST00000338272.9	2769	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCAATTTATTTGT	109089510	True	NA	16	True	AATAAA	-17	NA	109090763	109096934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109090883_109092889_109093022_109094416
transcript_57593.known	chr2	+	3379	21	FSM	ENSG00000079246.16	ENST00000392132.7	3379	21	0	0	0	0	multi-exon	FALSE	canonical	3	3820	junction_1	365.854014601453	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	216043190	True	NA	25	True	ATTAAA	-28	NA	216109347	216206293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_57623.known	chr2	+	3761	23	FSM	ENSG00000079246.16	ENST00000392133.7	3761	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1379.7918972628	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTCTGCAAAAGACTT	NA	False	NA	35	True	ATTAAA	-38	NA	216107463	216206303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216107533_216107652_216107699_216109090_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_5763.known	chr1	+	964	2	FSM	ENSG00000215717.7	ENST00000473828.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGACAAAATATAAAC	109089552	True	NA	NA	False	NA	NA	NA	109090805	109093776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109090883_109092889
transcript_57636.known	chr2	+	3201	18	FSM	ENSG00000138375.13	ENST00000357276.9	3201	18	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_5	24.4687499309505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	216411652	True	NA	25	True	AATAAA	-22	NA	216412483	216483053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216412649_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_57637.known	chr2	+	3056	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	27.2848615136685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	216412654	False	NA	4	True	AATAAA	-17	NA	216412742	216483017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_57645.known	chr2	+	385	5	FSM	ENSG00000197756.10	ENST00000420712.1	385	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5552.15602266363	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATTGCCTTGGCTTGTT	216378217	True	NA	12	True	AATAAA	-18	NA	216498861	216501462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499831_216499867_216499948_216500032_216501340
transcript_5765.known	chr1	+	1882	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	385.620011654517	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGAACCCCGCCTCT	109199243	True	NA	-20	True	AATAAA	-45	NA	109213981	109238148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
transcript_57651.known	chr2	+	2992	4	FSM	ENSG00000197756.10	ENST00000491306.6	2992	4	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	1903.05882433752	20189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCATTTCATTGTATC	216378199	True	NA	-64	True	TATAAA	-26	NA	216498843	216504086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216501340
transcript_57652.known	chr2	+	425	4	FSM	ENSG00000197756.10	ENST00000600880.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	5204.5068503707	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGATCATGCCTCAT	216378205	True	NA	NA	False	NA	NA	NA	216498849	216529454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216529269
transcript_57653.known	chr2	+	495	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	5234.1334420216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCTTTACTCCTATAC	216378210	True	NA	13	True	AATATA	-21	NA	216498854	216579180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
transcript_57657.known	chr2	+	1701	3	FSM	ENSG00000197756.10	ENST00000490649.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	1952	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378180	True	NA	17	True	AATAAA	-23	NA	216498824	216501467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948
transcript_57659.known	chr2	+	2225	2	FSM	ENSG00000197756.10	ENST00000487233.1	2225	2	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTGCCTTGGCTTG	216378199	True	NA	10	True	AATAAA	-16	NA	216498843	216501460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269
transcript_57660.known	chr2	+	742	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	127	2168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378222	True	NA	17	True	AATAAA	-23	NA	216498866	216501467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216499399_216499948_216500032_216501340
transcript_57661.known	chr2	+	2082	2	FSM	ENSG00000197756.10	ENST00000478153.1	2082	2	0	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	216378180	True	NA	6	True	AATAAA	-12	NA	216498824	216501456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216499399_216499948
transcript_57662.nnic	chr2	+	971	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	-223	0	at_least_one_novel_splicesite	FALSE	canonical	2	61	junction_1	5058.31987916937	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	NA	False	NA	16	True	ATTAAA	-16	NA	216632604	216664436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_216632708_216660556_216660787_216661857_216661999_216663939
transcript_57663.nnic	chr2	+	1255	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	5051.25231996977	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216632845	False	NA	16	True	ATTAAA	-16	NA	216632888	216664436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_216633276_216660556_216660787_216661857_216661999_216663939
transcript_57664.known	chr2	+	1414	4	FSM	ENSG00000115457.10	ENST00000233809.9	1414	4	0	0	0	0	multi-exon	FALSE	canonical	3	10277	junction_1	287.964503985397	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216585187	True	NA	16	True	ATTAAA	-16	NA	216633419	216664436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216633966_216660556_216660787_216661857_216661999_216663939
transcript_57673.known	chr2	+	1410	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	0	0	0	0	multi-exon	TRUE	canonical	3	2761	junction_1	271.588457044846	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	218194429	True	NA	14	True	AATAAA	-19	NA	218217188	218254348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_57699.known	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	3052	junction_2	215.024029664904	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	218194450	True	NA	22	True	AATAAA	-27	NA	218217209	218254356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_57700.nnic	chr2	-	1677	12	NNC	ENSG00000127837.10	novel	1760	11	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	335.247657315509	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	-218270191	False	NA	-7	True	AATAAA	-15	NA	218270202	218264128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_218264367_218264514_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_57702.known	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_10	323.174890732557	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	-218257692	True	NA	-7	True	AATAAA	-15	NA	218270178	218264128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
transcript_57716.known	chr2	-	2270	8	FSM	ENSG00000127837.10	ENST00000475678.5	2270	8	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	37.2268281578471	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGAGTCTGTGTGGATT	-218270078	False	NA	-8	True	AATAAA	-14	NA	218270088	218264129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_57723.known	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	31.7668979044089	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	-218269730	False	12486	-40	True	NA	NA	NA	218269740	218264161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
transcript_57725.known	chr2	-	2292	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	38.4787158081963	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	-218290944	True	NA	-3	True	AATAAA	-22	NA	218292503	218274196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
transcript_57729.known	chr2	+	758	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_1	106	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	218270372	False	NA	26	True	AATAAA	-27	NA	218270391	218272947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218270603_218271380_218271550_218272569
transcript_57732.known	chr2	-	480	3	FSM	ENSG00000225062.1	ENST00000441749.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTGTGGTGTTTTGT	-218367683	True	NA	-3	True	AATATA	-16	NA	218367835	218366664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218366799_218366926_218367028_218367590
transcript_57734.known	chr2	+	1372	2	FSM	ENSG00000127838.15	ENST00000469689.1	1372	2	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATAAAGTTATTGAGT	218261756	True	NA	-10	True	NA	NA	NA	218270519	218272911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218271550_218272569
transcript_57735.known	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	6.81705377873919	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	218399802	True	NA	13	True	ACTAAA	-19	NA	218399867	218405941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_5774.known	chr1	+	1914	11	FSM	ENSG00000031698.13	ENST00000234677.7	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_5	82.1914837437553	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTTCTGCTTTTCCT	109199179	True	NA	14	True	NA	NA	NA	109213917	109238182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109237243_109237374_109237730
transcript_57741.nnic	chr2	-	1789	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-18	2049	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	14.649232061784	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCAATCCCATTACTGG	-218565419	True	NA	NA	False	AATAAA	-16	NA	218568369	218526221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_57746.known	chr2	+	6500	20	FSM	ENSG00000127831.11	ENST00000248444.10	6500	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	3.1172827147286	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTCAGACTGCAGT	218418902	True	NA	NA	False	NA	NA	NA	218419122	218453295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724_218430879_218431856_218431958_218432045_218432184_218432792_218432952_218434525_218434706_218435288_218435435_218436481_218436627_218437123_218437313_218438657_218438727_218440721_218440863_218449222
transcript_57752.known	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	46.3324279263565	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	218557695	True	NA	-1	True	AATAAA	-18	NA	218568874	218593842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
transcript_57753.known	chr2	+	3820	8	FSM	ENSG00000144580.14	ENST00000273064.11	3820	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	35.4700218350594	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATAGGAAACCTTAG	218557659	True	NA	NA	False	NA	NA	NA	218568838	218597080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_57761.known	chr2	+	1525	9	FSM	ENSG00000074582.15	ENST00000392110.6	1525	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	86.4102677637328	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657332	True	NA	18	True	AATAAA	-14	NA	218659713	218663442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659744_218660036_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57763.known	chr2	+	1636	9	FSM	ENSG00000074582.15	ENST00000392111.7	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	86.4102677637328	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657301	True	NA	19	True	AATAAA	-15	NA	218659682	218663443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659744_218660036_218660246_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57767.known	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	83.8331676605387	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	218657378	True	NA	-20	True	NA	NA	NA	218659759	218663404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57769.nic	chr2	+	1626	9	NIC	ENSG00000074582.15	novel	1483	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	90.5254625782161	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657335	True	NA	19	True	AATAAA	-15	NA	218659716	218663443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_218659801_218660306_218660483_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57772.nic	chr2	+	1767	8	NIC	ENSG00000074582.15	novel	915	5	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_1	77.8142739122444	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218658693	True	NA	19	True	AATAAA	-15	NA	218658772	218663443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_218659174_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57775.known	chr2	+	1427	8	FSM	ENSG00000074582.15	ENST00000359273.8	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	60.6458437763623	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657301	True	NA	19	True	AATAAA	-15	NA	218659682	218663443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659744_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57777.known	chr2	+	1430	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	74.4747594552568	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657355	True	NA	19	True	AATAAA	-15	NA	218659736	218663443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57780.known	chr2	+	2015	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8854563749042	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657390	True	NA	18	True	AATAAA	-14	NA	218659771	218663442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57782.nnic	chr2	+	909	6	NIC	ENSG00000074582.15	novel	1427	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	87.2454010249251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657310	True	NA	19	True	AATAAA	-15	NA	218659691	218663443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_218659744_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_57785.known	chr2	-	1477	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	16.0208197875972	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-218669191	True	NA	-35	True	AATAAA	-15	NA	218672002	218663891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
transcript_57791.known	chr2	+	5007	20	FSM	ENSG00000135912.11	ENST00000392102.6	5007	20	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	24.7568787833081	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACTGAGTGAACTGTA	218705229	True	NA	7	True	AATAAA	-1	NA	218710834	218755416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218711038_218727268_218727348_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754133
transcript_57792.known	chr2	-	2113	9	FSM	ENSG00000187736.13	ENST00000418099.5	2113	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.1669730384955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-219158898	True	NA	-35	True	AATAAA	-18	NA	219160798	219075328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219095273_219095356_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_57794.nic	chr2	-	2111	8	NIC	ENSG00000187736.13	novel	2113	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	52.9223535966049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	NA	False	NA	-35	True	AATAAA	-18	NA	219160863	219075328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219076456_219077245_219077365_219078073_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_57795.nic	chr2	-	1998	8	NIC	ENSG00000187736.13	novel	2113	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	50.6464334824259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-219158655	False	1900	-35	True	AATAAA	-18	NA	219160555	219075328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160509
transcript_57796.known	chr2	-	8020	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	9.31095470674304	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTATTTTCATTTGT	-219158915	True	NA	-8	True	ATTAAA	-18	NA	219160815	219069356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_57798.nic	chr2	-	1467	8	NIC	ENSG00000187736.13	novel	8020	8	NA	NA	2	319	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	52.9223535966049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTTTGGGATTACTTA	NA	False	NA	-35	True	AATAAA	-15	NA	219160863	219075972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219076456_219077245_219077365_219078073_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_57799.nic	chr2	-	1354	8	NIC	ENSG00000187736.13	novel	8020	8	NA	NA	0	319	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	50.6464334824259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTTTGGGATTACTTA	-219158655	False	1900	-35	True	AATAAA	-15	NA	219160555	219075972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160509
transcript_57802.known	chr2	-	1954	7	FSM	ENSG00000187736.13	ENST00000409720.5	1954	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	56.0904527427698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAACATTTATTGAGCA	-219156462	False	NA	-23	True	AATAAA	-30	NA	219158362	219075316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219076446_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185
transcript_57803.known	chr2	-	1154	9	FSM	ENSG00000115649.16	ENST00000453038.5	1154	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	97.2869467092066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGTCTTCTGGCCTCA	-219177072	False	NA	NA	False	GGGGCT	-12	NA	219177313	219172893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177103
transcript_57804.known	chr2	-	2073	9	FSM	ENSG00000115649.16	ENST00000409789.5	2073	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	103.423809516958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGACTGATGGGTTCAGG	-219177865	False	NA	NA	False	NA	NA	NA	219178106	219172173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177697
transcript_57805.nnic	chr2	-	2002	9	NNC	ENSG00000115649.16	novel	2073	9	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	87.3190092419743	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	NA	False	NA	-8	True	AATAAA	-15	NA	219178181	219171896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219178120
transcript_57806.known	chr2	-	2019	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	23.0429944199259	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	-219173889	True	NA	-8	True	AATAAA	-15	NA	219176925	219171896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
transcript_57807.known	chr2	-	919	7	FSM	ENSG00000115649.16	ENST00000451647.1	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	24.7857485933617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCTGTCCTGCATCCC	-219173862	True	NA	NA	False	AATACA	-8	NA	219176898	219173050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219175109_219175590_219175673_219176222_219176332_219176759
transcript_57809.known	chr2	+	944	10	FSM	ENSG00000158552.13	ENST00000409336.5	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	45.2297291066587	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGGAGGTCGCCCTG	219205574	True	NA	NA	False	NA	NA	NA	219206808	219209418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_57811.known	chr2	+	1070	9	FSM	ENSG00000158552.13	ENST00000621130.4	1070	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	58.4759565975624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTGTTTCTCTCTCCT	219205549	True	NA	NA	False	AATAAA	-29	NA	219206783	219209651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_57812.known	chr2	+	1322	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	20.4068003371425	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	219205547	True	NA	NA	False	AATAAA	-26	NA	219206781	219209648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_57817.known	chr2	-	2980	19	FSM	ENSG00000115657.14	ENST00000265316.9	2980	19	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_12	32.189638697975	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-219217509	True	NA	-8	True	AATAAA	-14	NA	219218958	219209771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124
transcript_57821.known	chr2	-	4025	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_15	75.9961987353461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-219229262	False	NA	-5	True	AATAAA	-16	NA	219229368	219219381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
transcript_57822.known	chr2	-	3770	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_15	56.692935087971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219225242	True	NA	-3	True	AATAAA	-18	NA	219229636	219219379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_57823.known	chr2	-	3799	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_14	75.6443410079737	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219229611	False	NA	-3	True	AATAAA	-18	NA	219229717	219219379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
transcript_57827.known	chr2	+	2540	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	0	0	0	multi-exon	TRUE	canonical	2	155	junction_5	46.7605001972629	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTAGTTCCTTA	219225092	True	NA	60	True	AATAAA	-42	NA	219229805	219236679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_57829.known	chr2	+	2940	13	FSM	ENSG00000163516.14	ENST00000477479.5	2940	13	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_2	75.4644876010491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	219225113	True	NA	-1	True	NA	NA	NA	219229826	219236618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_57857.known	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.3317325800297	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	8	True	AATAAA	-15	NA	219245454	219250337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_57859.known	chr2	+	3118	8	FSM	ENSG00000115661.14	ENST00000396738.7	3118	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.5249945465108	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	219243312	True	NA	8	True	AATAAA	-15	NA	219245478	219250337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245797_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_57863.known	chr2	+	895	6	FSM	ENSG00000115661.14	ENST00000409516.7	895	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7082869338697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGAGTGGGGGTGGG	219243316	True	NA	NA	False	NA	NA	NA	219245482	219248746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245523_219245895_219246086_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_57865.known	chr2	+	2094	6	FSM	ENSG00000115661.14	ENST00000496443.5	2094	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	16.4851448279959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTAGTCTCAGTGTTC	219243340	True	NA	15	True	AATAAA	-19	NA	219245506	219248904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245797_219245895_219246877_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_57868.known	chr2	-	673	4	FSM	ENSG00000127824.15	ENST00000456818.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	108.52649446103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	-219253133	False	NA	NA	False	AAGAAA	-35	NA	219253145	219251172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219252995
transcript_57870.known	chr2	-	648	4	FSM	ENSG00000127824.15	ENST00000447205.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	105.237297993102	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	-219253342	False	NA	NA	False	AAGAAA	-14	NA	219253354	219251193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253208
transcript_57874.known	chr2	+	2486	14	FSM	ENSG00000163516.14	ENST00000410034.7	2486	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.9644893523586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACTTGTACTTACA	219225174	True	NA	30	True	AATAAA	-12	NA	219229887	219236649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229959_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_57875.known	chr2	-	2725	17	FSM	ENSG00000163521.16	ENST00000295759.12	2725	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	3.45902352550543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTAGCCCTGTCTTTG	-219245432	False	357	-1	True	ATTAAA	-27	NA	219245444	219236597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243644_219245228
transcript_57876.known	chr2	-	2049	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	12.2292908852294	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTGATTTCTTTC	-219249050	True	NA	NA	False	ATTAAA	-17	NA	219253918	219249709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
transcript_57877.known	chr2	-	2042	14	FSM	ENSG00000163521.16	ENST00000409640.5	2042	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	4.10224357722258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAACCCTTGGACCT	-219243257	False	256	NA	False	NA	NA	NA	219243614	219236765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219242513_219242575_219242767_219242919_219243147_219243315_219243501
transcript_57880.known	chr2	+	1946	10	FSM	ENSG00000135924.17	ENST00000392086.8	1946	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07643029507648	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	219275603	True	NA	16	True	AATAAA	-18	NA	219279343	219286898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_57885.nnic	chr2	+	1121	5	NNC	ENSG00000230432.1	novel	311	3	NA	NA	-90	0	intron_retention	FALSE	canonical	2	12	junction_2	4.96865172858795	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298743	True	NA	7	True	AATAAA	-19	NA	219298911	219304130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_219299129_219299625_219300171_219300374_219300425_219303676_219303852_219303996
transcript_57888.known	chr2	+	311	3	FSM	ENSG00000230432.1	ENST00000417355.1	311	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298833	True	NA	7	True	AATAAA	-19	NA	219299001	219304130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219299129_219300374_219300425_219303996
transcript_57889.known	chr2	-	1657	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_13	158.892082488559	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-219381492	True	NA	-3	True	ATTAAA	-16	NA	219387929	219374195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
transcript_57891.known	chr2	-	3825	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_5	36.3551079980657	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATCATTGTACATTTG	-219381475	True	NA	-14	True	GATAAA	-5	NA	219387912	219372042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_57896.nic	chr2	-	1628	15	NIC	ENSG00000123992.20	novel	1662	15	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	177.114974764175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCGTGCTACGCTTATT	-219387345	False	NA	-1	True	ATTAAA	-18	NA	219387385	219374193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387277
transcript_57897.known	chr2	-	1875	15	FSM	ENSG00000123992.20	ENST00000373966.5	1875	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	176.106878494456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-219381495	True	NA	-3	True	ATTAAA	-16	NA	219387932	219374195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
transcript_579.known	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.2671152621316	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	6235973	True	NA	NA	False	NA	NA	NA	6236239	6238940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
transcript_5791.known	chr1	+	804	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCTGATTCTATGT	109199193	True	NA	NA	False	NA	NA	NA	109213931	109215153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109214129_109214546
transcript_57910.known	chr2	+	1631	8	FSM	ENSG00000175084.13	ENST00000477226.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.9277002188456	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	219419964	True	NA	4	True	AATAAA	-16	NA	219420042	219426734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_57911.known	chr2	+	1522	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	67.2298606771326	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494717	True	NA	13	True	AATAAA	-17	NA	219498890	219506989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57912.known	chr2	+	1501	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	90.5799217388833	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	219494732	True	NA	12	True	AATAAA	-16	NA	219498905	219506988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57915.known	chr2	+	1783	13	FSM	ENSG00000144591.20	ENST00000443704.5	1783	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	125.966568536612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGACTCCTGGGTTTTCTC	219494731	True	NA	-43	True	NA	NA	NA	219498904	219506933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57916.known	chr2	+	1797	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	99.2651821581409	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494733	True	NA	-12	True	NA	NA	NA	219498906	219506964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57918.known	chr2	+	1537	13	FSM	ENSG00000144591.20	ENST00000683386.1	1537	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	135.148966165323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494932	False	NA	-12	True	NA	NA	NA	219499105	219506964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501911_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57919.nnic	chr2	+	1546	13	NIC	ENSG00000144591.20	novel	1797	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	109.620811081757	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	219494725	True	NA	12	True	AATAAA	-16	NA	219498898	219506988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_219498972_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57921.known	chr2	+	1335	13	FSM	ENSG00000144591.20	ENST00000341142.8	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	108.022245651327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGCTGCCAGAAGGCCC	219494741	True	NA	NA	False	NA	NA	NA	219498914	219506798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498972_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57922.known	chr2	+	1630	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	70.2157242637595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	219494714	True	NA	-41	True	NA	NA	NA	219498887	219506935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57923.known	chr2	+	1814	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	118.883511288144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494691	True	NA	-12	True	NA	NA	NA	219498864	219506964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_57943.known	chr2	+	1457	5	FSM	ENSG00000072195.15	ENST00000396688.5	1457	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	35.2880999771878	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCCAGTTTGTACCT	219460666	True	NA	-9	True	NA	NA	NA	219460765	219466841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219460997_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_57945.known	chr2	+	408	2	FSM	ENSG00000286095.3	ENST00000475104.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTCTGTCCTGCTCTTCC	219497658	False	NA	NA	False	AATAAA	-18	NA	219497690	219498287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219497862_219498050
transcript_57946.known	chr2	+	2213	5	FSM	ENSG00000188760.11	ENST00000373883.4	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	7.46240577829965	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTTTGGTGGCTGG	219543572	True	NA	36	True	TATAAA	-31	NA	219544027	219550595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219544378_219544688_219544894_219547505_219548082_219549151_219549355_219549716
transcript_57947.known	chr2	-	2634	4	FSM	ENSG00000123989.15	ENST00000535926.3	2210	4	0	-424	0	6	multi-exon	FALSE	canonical	1	6	junction_3	320.223186057613	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAGGTTTTGAAAAGG	-219542789	False	NA	-4	True	AATAAA	-22	NA	219543097	219538947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219540643_219540945_219541126_219541615_219542190_219542912
transcript_57948.nnic	chr2	-	1268	5	NIC	ENSG00000124006.15	novel	2274	9	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	246.568955872389	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	-219568730	True	NA	-17	True	AATAAA	-17	NA	219571555	219561721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219571393
transcript_57949.known	chr2	-	6105	21	FSM	ENSG00000124006.15	ENST00000404537.6	6105	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	219.69712674498	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-219568714	True	NA	-4	True	AATAAA	-15	NA	219571539	219550727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535_219552698_219552867_219553025_219553573_219553687_219554473_219554741_219556019_219556293_219556453_219556724_219557342_219557619_219557822_219558111_219558183_219558460_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_5795.known	chr1	-	1584	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	167.246610044654	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276838	True	NA	-11	True	AATAAA	-27	NA	109283115	109279555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_57950.known	chr2	-	694	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	53.8227543785051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219552650	False	NA	-5	True	AATAAA	-14	NA	219552714	219550728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
transcript_57951.known	chr2	-	662	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	11.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219551039	True	NA	-5	True	AATAAA	-14	NA	219552389	219550728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219550843_219551528_219551799_219552111
transcript_57952.nic	chr2	-	730	3	ISM	ENSG00000124006.15	ENST00000489804.5	694	4	283	0	-42	0	3prime_fragment	FALSE	canonical	3	15	junction_1	65	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219552123	False	NA	-5	True	AATAAA	-14	NA	219552431	219550728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_219550869_219551528_219551799_219552111
transcript_57953.known	chr2	-	5380	16	FSM	ENSG00000124006.15	ENST00000465149.1	5380	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.287636050053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219570711	False	NA	-5	True	AATAAA	-14	NA	219570739	219550728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219551799_219552111_219552217_219552535_219553025_219556019_219556293_219556577_219556724_219557342_219557619_219557822_219558111_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_57955.known	chr2	-	2274	9	FSM	ENSG00000124006.15	ENST00000289656.3	2274	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	178.523632889318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAATAAACATGCAAATAA	-219568639	True	NA	-42	True	NA	NA	NA	219571464	219561746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219571393
transcript_57956.known	chr2	+	3618	25	FSM	ENSG00000144589.22	ENST00000456909.6	3618	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.6160584397646	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	219596454	True	NA	15	True	AATAAA	-18	NA	219597856	219616451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219616043
transcript_57962.known	chr2	-	6761	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_7	82.6509745480959	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTATAGTCTTTTGT	-222647495	True	NA	1	True	AATAAA	-19	NA	222656092	222566898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
transcript_57967.known	chr2	+	5577	17	FSM	ENSG00000123983.15	ENST00000357430.8	5577	17	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	138.584586083734	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAATATATTGGCTTT	222847744	True	NA	NA	False	AATAAA	-33	NA	222861035	222944639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_222861259_222887829_222887889_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_57969.known	chr2	+	3147	16	FSM	ENSG00000123983.15	ENST00000392066.7	3147	16	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	56.3056736829326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGATCTTGTGAATATA	NA	False	NA	13	True	AATAAA	-26	NA	222860941	222942222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_57972.known	chr2	+	5433	15	FSM	ENSG00000123983.15	ENST00000680251.1	5433	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	132.002029205182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847692	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_222861259_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_57974.known	chr2	-	3986	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.74165738677394	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGTTTTCATGAAT	-223836441	True	NA	2	True	AATAAA	-27	NA	223837582	223755325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
transcript_57977.known	chr2	-	4607	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	54.965052758943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGCCTAATATCAC	-223937785	True	NA	-15	True	AATAAA	-18	NA	223945335	223875347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_5798.nic	chr1	-	1644	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	160.201403851272	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276904	True	NA	-22	True	AATAAA	-16	NA	109283181	109279566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_57980.known	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	49.2392120164407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-223937785	True	NA	NA	False	NA	NA	NA	223945335	223900854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_57981.known	chr2	+	1689	4	FSM	ENSG00000135900.4	ENST00000258383.4	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	19.3964487013015	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCATTTTAATTTGATA	223950110	True	NA	23	True	AATAAA	-23	NA	223957462	223967714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_223957652_223959533_223960003_223963755_223963935_223966862
transcript_57984.nnic	chr2	-	1699	2	NNC	ENSG00000124019.10	novel	2582	2	NA	NA	-31573	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATAAGACATTGTG	-224432795	True	NA	NA	False	AATAAA	-18	NA	224433680	224378697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_224380209_224433492
transcript_57985.known	chr2	-	6756	16	FSM	ENSG00000036257.14	ENST00000264414.9	6756	16	0	0	0	0	multi-exon	TRUE	canonical	3	509	junction_15	74.6721426563407	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGCAGTTGTGATT	-224582727	True	NA	NA	False	ATTAAA	-17	NA	224585363	224470149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224557658_224557857_224584943
transcript_57986.known	chr2	+	5061	9	FSM	ENSG00000144468.17	ENST00000392062.7	5061	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	42.4291689171494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	226834129	True	NA	NA	False	AATAAA	-23	NA	226836053	226999210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_226836088_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_57988.known	chr2	+	4883	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	21.3983384609387	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTTATACTGTCACCA	226835925	False	NA	NA	False	AATAAA	-28	NA	226835935	226999215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_57990.known	chr2	-	2110	9	FSM	ENSG00000236432.8	ENST00000662009.1	2110	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.7662812973354	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGTCCTTTAACATGC	-227325216	False	NA	NA	False	AATAAA	-25	NA	227325226	227245704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_227246266_227259177_227259284_227264668_227265439_227265838_227265936_227268627_227268770_227279482_227279576_227281703_227281790_227305459_227305656_227325167
transcript_57994.known	chr2	+	1247	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	237.895164673433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	227315511	True	NA	-15	True	NA	NA	NA	227325261	227357151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_57997.known	chr2	+	1921	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	221.343871329206	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315500	True	NA	23	True	AATAAA	-16	NA	227325250	227357833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_58.known	ERCC-00156	+	478	1	FSM	ERCC-00156A	DQ883643	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00156_+_0_500
transcript_58002.known	chr2	+	1760	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	212.447448483965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315517	True	NA	23	True	AATAAA	-16	NA	227325267	227357833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
transcript_58006.known	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	191.437952861804	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	227315525	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_5801.nnic	chr1	-	1694	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	185.089719005764	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276901	True	NA	-22	True	AATAAA	-16	NA	109283178	109279566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283062
transcript_58010.known	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_5	70.6588045940962	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	227315499	True	NA	49	True	NA	NA	NA	227325249	227357215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_58019.known	chr2	+	1548	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.423317899883	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	227315508	True	NA	-11	True	TTTAAA	-22	NA	227325258	227357799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_58021.known	chr2	+	647	5	FSM	ENSG00000168958.20	ENST00000524634.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	221.509029161341	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAAATACTGTCTCAAC	227315520	True	NA	-35	True	NA	NA	NA	227325270	227357131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_58026.known	chr2	+	8677	13	FSM	ENSG00000173744.18	ENST00000310078.13	8677	13	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_11	32.7222104319918	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATAGCCTCTTTCA	227459781	True	NA	9	True	AATAAA	-22	NA	227472155	227561217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227472589_227491546_227491641_227519947_227520064_227523762_227523926_227524761_227524916_227531090_227531211_227533548_227533759_227534844_227535026_227536624_227536705_227536900_227536994_227551958_227552118_227553703_227553796_227554435
transcript_58028.known	chr2	+	1683	13	FSM	ENSG00000123977.10	ENST00000309931.3	1683	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.10465600169953	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTACATGTGTATTT	227871577	True	NA	7	True	AATAAA	-15	NA	227871630	227924344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227871730_227885350_227885424_227889855_227890001_227891254_227891314_227893794_227893918_227898181_227898282_227903001_227903110_227904928_227905036_227906235_227906339_227907137_227907253_227918779_227918857_227921398_227921562_227923933
transcript_5803.nic	chr1	-	1697	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	171.60823918187	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276909	True	NA	-22	True	AATAAA	-16	NA	109283186	109279566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_58035.known	chr2	+	3120	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.9167736413325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922301	230013109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
transcript_58036.known	chr2	+	2813	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.2894584868251	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	229921287	True	NA	NA	False	ATTAAA	-26	NA	229922502	230013119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
transcript_58038.known	chr2	-	1836	4	FSM	ENSG00000163053.11	ENST00000457406.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACATTTTCCTTTT	-230068891	False	NA	NA	False	TATAAA	-27	NA	230068907	230045656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230046723_230049760_230049905_230059093_230059367_230068554
transcript_58039.known	chr2	+	629	4	FSM	ENSG00000079263.19	ENST00000538494.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGACTGTGGGAGG	230230379	True	NA	NA	False	NA	NA	NA	230230413	230238927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230230529_230237082_230237261_230238212_230238382_230238760
transcript_58040.known	chr2	-	6192	19	FSM	ENSG00000135899.19	ENST00000258381.11	6192	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.18644986960843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTAAACTTTGTTCCA	-230219496	True	NA	NA	False	AATATA	-30	NA	230219984	230165185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230169238_230170620_230170762_230171695_230171768_230172065_230172175_230172843_230172960_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_58041.known	chr2	-	6120	18	FSM	ENSG00000135899.19	ENST00000358662.9	6120	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.93569075351358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTAAACTTTGTTCCA	-230219496	True	NA	NA	False	AATATA	-30	NA	230219984	230165185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230169238_230170620_230170762_230172065_230172175_230172843_230172960_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_58042.known	chr2	-	1952	15	FSM	ENSG00000135899.19	ENST00000258382.10	1952	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	4.09641455969705	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGTCCATGTGTTTTA	-230219496	True	NA	NA	False	AATAAA	-18	NA	230219984	230176474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230176725_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_58045.nic	chr2	+	2597	18	NIC	ENSG00000185404.17	novel	3070	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	3.36478815201767	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTTATGTCAATTTAAT	230341877	True	NA	12	True	ATTAAA	-20	NA	230342048	230403732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_230342174_230357804_230357968_230358963_230359133_230361613_230361698_230370907_230370968_230371597_230371652_230383509_230383576_230385223_230385305_230388558_230388634_230389918_230390024_230392086_230392230_230393413_230393462_230396756_230396799_230400126_230400243_230400954_230401064_230401365_230401444_230401663_230401808_230402797
transcript_5805.nic	chr1	-	1697	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	164.833868126768	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276904	True	NA	-22	True	AATAAA	-16	NA	109283181	109279566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_58052.known	chr2	+	2037	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	0	0	0	multi-exon	TRUE	canonical	3	4003	junction_2	225.072965946601	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230802810	True	NA	15	True	AATAAA	-17	NA	230864941	230879248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_58059.known	chr2	+	1889	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	1688.69244905637	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	230802816	True	NA	14	True	AATAAA	-16	NA	230864947	230879247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_58062.known	chr2	+	1888	5	FSM	ENSG00000135916.16	ENST00000326407.10	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1821.39074610584	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230802848	True	NA	15	True	AATAAA	-17	NA	230864979	230879248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230877399_230877551_230878007
transcript_58063.known	chr2	-	3508	6	FSM	ENSG00000238062.6	ENST00000414876.5	3508	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTGTGGAGCTCC	NA	False	NA	NA	False	AAAAAG	-38	NA	230996031	230984367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230986111_230986983_230988180_230991768_230991976_230992333_230992403_230995276_230995386_230995847
transcript_58066.known	chr2	+	3323	25	FSM	ENSG00000173692.14	ENST00000308696.11	3323	25	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_6	83.0740027358472	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGCCAGAGTCTTG	231040973	True	NA	23	True	AATAAA	-37	NA	231056866	231172827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_58070.known	chr2	+	3174	24	FSM	ENSG00000173692.14	ENST00000677259.1	3174	24	0	0	0	0	multi-exon	FALSE	canonical	1	57	junction_21	278.490014346542	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGATGGACAAGACAT	231040951	True	NA	4	True	AATAAA	-8	NA	231056844	231172743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165870_231166018_231170565_231170722_231172534
transcript_58071.known	chr2	+	3199	24	FSM	ENSG00000173692.14	ENST00000619128.5	3199	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	291.236922761493	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	231040955	True	NA	-2	True	AATAAA	-12	NA	231056848	231172802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_58074.known	chr2	+	4089	23	FSM	ENSG00000173692.14	ENST00000676506.1	4089	23	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_6	75.8061495793685	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTTACAGAGAACGTAT	231040970	True	NA	NA	False	NA	NA	NA	231056863	231167229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870
transcript_58075.nic	chr2	+	2750	22	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-19	1942	0	0	5prime_fragment	FALSE	canonical	3	1187	junction_6	73.1256800266847	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAATTGGTGGTCA	231040951	True	NA	NA	False	AAAAAG	-37	NA	231056844	231165287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199
transcript_58077.nic	chr2	+	2645	21	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-19	3519	0	0	5prime_fragment	FALSE	canonical	3	1187	junction_6	74.1973550741534	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGGAAAAGGTA	231040951	True	NA	18	True	NA	NA	NA	231056844	231163710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634
transcript_58081.known	chr2	+	2148	21	FSM	ENSG00000135931.19	ENST00000682030.1	2148	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	52.495976036264	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194841	True	NA	-4	True	TTTAAA	-11	NA	231198673	231345181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58083.known	chr2	+	2333	21	FSM	ENSG00000135931.19	ENST00000683575.1	2333	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.1080889377718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	231194920	True	NA	14	True	AATAAA	-17	NA	231198752	231345199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58084.known	chr2	+	2091	20	FSM	ENSG00000135931.19	ENST00000683271.1	2091	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	50.3449596131406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194802	True	NA	-4	True	TTTAAA	-11	NA	231198634	231345181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58087.known	chr2	+	2216	19	FSM	ENSG00000135931.19	ENST00000683553.1	2216	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.367827234043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194872	True	NA	-4	True	TTTAAA	-11	NA	231198704	231345181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58090.nic	chr2	+	2093	16	ISM	ENSG00000135931.19	ENST00000684011.1	3702	19	-38	19220	3	0	5prime_fragment	FALSE	canonical	3	206	junction_1	27.7917653671411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	NA	False	NA	4	True	AATAGA	-3	NA	231198596	231278857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
transcript_58091.known	chr2	+	2261	16	FSM	ENSG00000135931.19	ENST00000683814.1	2261	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4551979406678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	231194839	True	NA	4	True	AATAGA	-3	NA	231198671	231278857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
transcript_58095.known	chr2	+	1941	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	72.4557431177391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	231194798	True	NA	NA	False	NA	NA	NA	231198630	231260004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_58096.known	chr2	+	2128	12	FSM	ENSG00000135931.19	ENST00000682233.1	2128	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.8682329014757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATCTCAAACAAAACAAAAC	231194839	True	NA	NA	False	NA	NA	NA	231198671	231259989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_58099.nic	chr2	+	766	4	ISM	ENSG00000135931.19	ENST00000482392.2	950	9	-39	24084	3	-24084	5prime_fragment	FALSE	canonical	3	206	junction_1	43.9267066322477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTATGTAGGCGTGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	231198596	231215276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830
transcript_58101.known	chr2	+	2216	21	FSM	ENSG00000135931.19	ENST00000682334.1	2216	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	58.3407233414191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCATTCATTTTGAA	231194798	True	NA	-8	True	TTTAAA	-7	NA	231198630	231345177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344948
transcript_58106.known	chr2	-	2205	15	FSM	ENSG00000115053.17	ENST00000356936.6	2205	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	1724.37965923507	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-231464337	False	NA	NA	False	NA	NA	NA	231464353	231455190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457285_231457358_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58111.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678828.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	2	115	junction_7	1371.58385963953	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTACTTCCTAAAGAG	-231330860	True	NA	-18	True	ATTAAA	-19	NA	231464489	231454748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458345_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58119.known	chr2	-	2978	14	FSM	ENSG00000115053.17	ENST00000453992.6	2978	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	1384.00250966014	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231464164	False	133629	-29	True	AAGAAA	-16	NA	231464180	231454807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463700
transcript_5812.known	chr1	-	1717	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	132.053483289838	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276870	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_58120.known	chr2	-	2563	14	FSM	ENSG00000115053.17	ENST00000417652.6	2563	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_13	1375.58639459471	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231464191	False	NA	-29	True	AAGAAA	-16	NA	231464207	231454807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464142
transcript_58121.known	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_13	1375.09158382463	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231330865	True	NA	-29	True	AAGAAA	-16	NA	231464494	231454807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
transcript_58122.known	chr2	-	2674	14	FSM	ENSG00000115053.17	ENST00000678246.1	2674	14	0	0	0	0	multi-exon	TRUE	canonical	2	61	junction_1	1364.87128378532	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGTTACTTCCTAAA	-231330889	True	NA	-21	True	ATTAAA	-16	NA	231464518	231454751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455262_231455457_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_5814.known	chr1	-	1730	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	157.896375215274	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276848	True	NA	-11	True	AATAAA	-27	NA	109283125	109279555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
transcript_5815.known	chr1	-	1742	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_7	121.929052639439	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-109276891	True	NA	-12	True	AATAAA	-26	NA	109283168	109279556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_5816.nnic	chr1	-	1729	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_7	151.835840462585	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276899	True	NA	-22	True	AATAAA	-16	NA	109283176	109279566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283073
transcript_58178.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678405.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1398.14484439816	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	-231464535	False	NA	68	True	NA	NA	NA	231464551	231454878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456160_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_5818.nnic	chr1	-	1795	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	155.863886196926	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276901	True	NA	-22	True	AATAAA	-16	NA	109283178	109279566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283062
transcript_58182.nnic	chr2	-	1758	5	Fusion	ENSG00000181798.4_ENSG00000283491.1	novel	1325	3	NA	NA	8	-4997	multi-exon	FALSE	canonical	2	4	junction_1	7.59522876548166	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACTCCATGGCCATG	-231513326	True	NA	-6	True	AATAAA	-28	NA	231514377	231502086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_-_231503205_231507168_231507256_231509177_231509344_231513526_231513633_231514096
transcript_58185.known	chr2	-	1281	3	FSM	ENSG00000181798.4	ENST00000313064.4	1325	3	44	0	33	0	multi-exon	FALSE	canonical	2	13	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGCTCATAC	-231513301	True	NA	NA	False	AATAAA	-13	NA	231514352	231508424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231509344_231513526_231513633_231514096
transcript_58187.known	chr2	+	1108	5	FSM	ENSG00000187514.17	ENST00000448874.5	1108	5	0	0	0	0	multi-exon	FALSE	canonical	2	299	junction_1	11588.2318835748	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGATGTATGTGTGA	231707616	False	NA	39	True	NA	NA	NA	231707629	231713465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231707836_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_5819.known	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	165.841576727395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-109276845	True	NA	-40	True	NA	NA	NA	109283122	109279584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
transcript_58190.known	chr2	+	1635	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	0	0	0	0	multi-exon	FALSE	canonical	3	27716	junction_2	447.621119549409	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	231289383	True	NA	-35	True	NA	NA	NA	231708529	231713506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
transcript_58191.known	chr2	+	933	5	FSM	ENSG00000187514.17	ENST00000409683.5	933	5	0	0	0	0	multi-exon	TRUE	canonical	1	80	junction_3	11844.4045940478	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAATGACAACAGAAA	231289389	True	NA	NA	False	NA	NA	NA	231708535	231713289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712451_231712517_231712803
transcript_58198.known	chr2	+	2051	8	FSM	ENSG00000144524.18	ENST00000410017.5	2051	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	438.514840462809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCGTGTCAATATTTGT	231779635	True	NA	9	True	AATACA	-20	NA	231786444	231808723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801139_231801208_231807486
transcript_58199.known	chr2	+	2563	8	FSM	ENSG00000144524.18	ENST00000373608.7	2563	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	441.273944254078	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779638	True	NA	8	True	AATAAA	-22	NA	231786447	231809253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801154_231801208_231807486
transcript_58202.known	chr2	+	1103	7	FSM	ENSG00000144524.18	ENST00000410024.5	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	354.833020197138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCAGTGAGTTCCAGA	231781659	False	NA	NA	False	NA	NA	NA	231781670	231807724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231781884_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58206.known	chr2	+	2513	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	75.4160681375881	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779635	True	NA	8	True	AATAAA	-22	NA	231786444	231809253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58212.known	chr2	+	1935	6	FSM	ENSG00000144524.18	ENST00000412922.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	384.978648758603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCTGGTTGGAGGGT	231779635	True	NA	50	True	NA	NA	NA	231786444	231808764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231796105_231796309_231798858_231798965_231807486
transcript_58214.known	chr2	+	2442	6	FSM	ENSG00000144524.18	ENST00000413197.5	2442	6	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	390.016204791545	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCATATCCTCATTGGAA	231779624	True	NA	2	True	AATAAA	-16	NA	231786433	231809247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58219.known	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	11.9660979437743	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	-231777760	True	NA	-5	True	ATTAAA	-32	NA	231781282	231732432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
transcript_58222.known	chr2	-	672	4	FSM	ENSG00000156973.14	ENST00000409772.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	119.04714285619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTAGGTAACCAGAT	-231777769	True	NA	NA	False	NA	NA	NA	231781291	231732803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231733034_231738012_231738139_231739099_231739189_231781064
transcript_58224.known	chr2	-	996	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGGAATTCCAGCCC	-231777760	True	NA	NA	False	NA	NA	NA	231781282	231778722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231779501_231781064
transcript_58226.known	chr2	+	668	4	FSM	ENSG00000144524.18	ENST00000449174.1	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	416.816506391002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTGTCAATATTTGTT	231796150	True	NA	10	True	AATACA	-21	NA	231796186	231808724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231796309_231798858_231798965_231807486_231807623_231808420
transcript_58227.known	chr2	+	2048	7	FSM	ENSG00000144535.20	ENST00000409401.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	11.6440256498057	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTGACCTGTGCA	231961670	False	NA	NA	False	AATGAA	-35	NA	231961683	232131890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618
transcript_58228.known	chr2	-	2871	18	FSM	ENSG00000171551.12	ENST00000304546.6	2871	18	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_15	16.1855589442904	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-232487265	True	NA	-2	True	AATAAA	-14	NA	232487834	232479826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
transcript_58229.known	chr2	+	3525	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	578.803057690469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	232531504	True	NA	25	True	AATAAA	-18	NA	232550682	232583642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
transcript_58235.known	chr2	+	967	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_6	116.896915651735	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	232531510	True	NA	15	True	AATAAA	-14	NA	232550688	232569210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_58237.known	chr2	+	3448	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_6	406.824969188908	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	232531504	True	NA	27	True	AATAAA	-20	NA	232550682	232583644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_58244.known	chr2	+	1014	6	FSM	ENSG00000135930.15	ENST00000409495.6	2693	6	0	1679	0	322	multi-exon	FALSE	canonical	3	1202	junction_5	75.1345459825239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTTTCTTGCTG	232531510	True	NA	NA	False	AATGAA	-8	NA	232550688	232567527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_58246.known	chr2	+	797	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	462.961337478628	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	232531513	True	NA	-17	True	NA	NA	NA	232550691	232569178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_58247.known	chr2	+	604	6	FSM	ENSG00000135930.15	ENST00000409394.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	559.087327704716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAATCCTTTTCTGTA	232531525	True	NA	11	True	AATACA	-29	NA	232550703	232580956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_58250.known	chr2	+	1048	6	FSM	ENSG00000135930.15	ENST00000454501.1	1048	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	520.84677209329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATCAAGTACGTGTTGG	232531628	False	NA	NA	False	AATACA	-14	NA	232550806	232567205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232551219_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_58255.known	chr2	+	7816	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	31.9149859240234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	232690740	True	NA	NA	False	ATTAAA	-24	NA	232697330	232860605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_58257.known	chr2	+	577	6	FSM	ENSG00000204120.16	ENST00000483164.5	577	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	14.0939703419583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAATAAATGATGCAGA	232690778	True	NA	-27	True	GATAAA	-42	NA	232697368	232736015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232734416_232734487_232735154_232735239_232735752
transcript_58258.known	chr2	+	3211	5	FSM	ENSG00000204120.16	ENST00000475359.6	3211	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.9945648963005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTGGAAAGTAAAGTT	232690740	True	NA	NA	False	AATAAA	-22	NA	232697330	232738681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735752
transcript_58259.known	chr2	+	1116	5	FSM	ENSG00000204120.16	ENST00000489328.1	1116	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.6316775935314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTATAGTTACATCTT	232690792	True	NA	NA	False	TATAAA	-16	NA	232697382	232736648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735762
transcript_58260.known	chr2	+	685	4	FSM	ENSG00000204120.16	ENST00000492910.5	685	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	48.7259912389909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCTGTACTTGTTTT	232690739	True	NA	NA	False	NA	NA	NA	232697329	232736234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232735762
transcript_58262.nic	chr2	-	1735	8	NIC	ENSG00000066248.15	novel	3184	15	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	8.48287590817344	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGAAGGTCTACTCTT	-232890721	True	NA	-14	True	AATAAA	-1	NA	232891019	232878700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
transcript_58266.known	chr2	+	3301	18	FSM	ENSG00000085978.22	ENST00000392021.7	3301	18	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	41.0983292161599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	233248100	True	NA	24	True	AATAAA	-30	NA	233251672	233295674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_233251941_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_58267.known	chr2	+	3559	17	FSM	ENSG00000085978.22	ENST00000479942.5	3559	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	31.8855374739081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	233248109	True	NA	16	True	AATAAA	-22	NA	233251681	233295666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_58268.known	chr2	+	3213	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	18.0449741964349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	233248133	True	NA	24	True	AATAAA	-30	NA	233251705	233295674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_58275.known	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	46.9068225314826	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-233841490	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
transcript_58281.known	chr2	-	3027	7	FSM	ENSG00000123485.12	ENST00000432087.5	3027	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	210.424504804508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	-233841521	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233852564_233852621_233853843_233853911_233854383
transcript_58282.known	chr2	-	2934	6	FSM	ENSG00000123485.12	ENST00000441687.5	2934	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	245.350850823876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	-233841521	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233852564_233852621_233853843_233853911_233854383
transcript_58284.nnic	chr2	-	1204	4	NNC	ENSG00000123485.12	novel	3027	7	NA	NA	-17	-7109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	283.01040420608	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGTTAGAAATGGTTT	-233841538	False	NA	-26	True	AATAAA	-15	NA	233854583	233851333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_233852215_233852564_233852621_233853843_233853911_233854383
transcript_58285.nic	chr2	-	1554	3	ISM	ENSG00000123485.12	ENST00000453122.1	634	7	-48	9218	-17	-7109	5prime_fragment	FALSE	canonical	3	581	junction_2	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGTTAGAAATGGTTT	-233841538	False	NA	-26	True	AATAAA	-15	NA	233854583	233851333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_233852621_233853843_233853911_233854383
transcript_58286.known	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233867351_233868326
transcript_58287.nnic	chr2	+	729	4	NNC	ENSG00000280744.1	novel	331	3	NA	NA	-57	5709	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATCAGCAATTCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	234682610	234723473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_234682769_234695648_234695749_234717634_234717765_234723132
transcript_58290.nic	chr2	-	1098	4	NIC	ENSG00000235726.7	novel	890	6	NA	NA	-52	540	combination_of_known_junctions	TRUE	canonical	3	6	junction_1	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTCCGGAGACTG	-234888664	True	NA	NA	False	NA	NA	NA	234888854	234816708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_234817379_234824932_234825114_234887776_234887818_234888648
transcript_58293.nic	chr2	+	2893	3	ISM	ENSG00000130147.16	ENST00000344528.8	5044	6	63898	0	47761	0	3prime_fragment	FALSE	canonical	3	136	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTAAGTGTGTGTGTGT	235042586	False	NA	35	True	AATAAA	-42	NA	235042600	235055648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_235043248_235052561_235052751_235053591
transcript_58295.nnic	chr2	+	656	3	FSM	ENSG00000233611.4	ENST00000685281.1	676	3	16	4	-8	-4	multi-exon	TRUE	canonical	3	45	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACCCGATTCTTTGAAGC	236166485	True	NA	24	True	GATAAA	-25	NA	236167433	236169796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_236167670_236169232_236169385_236169528
transcript_58296.known	chr2	-	896	2	FSM	ENSG00000168505.7	ENST00000465889.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACCAGAAGACACGCTA	-236166654	False	675	-70	True	AATATA	-45	NA	236167329	236165733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_236166438_236167137
transcript_58297.known	chr2	-	3215	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	5.396901259971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-236506920	True	NA	-3	True	AATAAA	-16	NA	236507476	236324150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_58298.nnic	chr2	-	1695	9	NNC	ENSG00000132321.17	novel	3336	20	NA	NA	23201	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	8.15092019345055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-236389630	True	NA	-3	True	AATAAA	-16	NA	236389690	236324150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380637_236389591
transcript_58299.nic	chr2	-	1270	8	ISM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	95071	0	-26893	5prime_fragment	FALSE	canonical	3	12	junction_2	3.49343407446785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAAGGAAA	-236506920	True	NA	NA	False	AAGAAA	-11	NA	236507476	236419221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_58300.known	chr2	+	2015	2	FSM	ENSG00000144476.6	ENST00000272928.4	2015	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGTCTCAGTTTTC	236569772	True	NA	9	True	AATAAA	-20	NA	236569824	236582354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_236569925_236580439
transcript_58305.known	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	515.075707420763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	237075185	True	NA	-48	True	NA	NA	NA	237085881	237098618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_58312.known	chr2	+	3438	8	FSM	ENSG00000198612.11	ENST00000354371.7	3438	8	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_7	67.4555030961832	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTCCAATGTGTTCT	237075192	True	NA	17	True	AATAAA	-25	NA	237085888	237100474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237086043_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_58319.known	chr2	+	3744	16	FSM	ENSG00000115648.14	ENST00000264605.8	3744	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	10.0323919824182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTAGCAGATGGCTAT	237486734	True	NA	NA	False	AATAAA	-27	NA	237487250	237555322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237534563_237534648_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_5832.known	chr1	-	1826	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	151.940138066133	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276909	True	NA	-20	True	AATAAA	-18	NA	109283186	109279564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
transcript_58321.known	chr2	+	2332	15	FSM	ENSG00000115648.14	ENST00000338530.8	2332	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	6.60859057498307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486734	True	NA	21	True	AAAAAG	-21	NA	237487250	237553994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_58324.known	chr2	+	2031	13	FSM	ENSG00000115648.14	ENST00000409373.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	10.5751280528102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486759	True	NA	21	True	AAAAAG	-21	NA	237487275	237553994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_58332.known	chr2	-	1603	6	FSM	ENSG00000124839.13	ENST00000264601.8	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_4	148.769082809568	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-237585940	True	NA	-7	True	ATTAAA	-14	NA	237590734	237574325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237585997_237586158_237590466
transcript_58333.known	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	293.147062069535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	-237585921	True	NA	-36	True	NA	NA	NA	237590715	237574354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
transcript_58334.nic	chr2	-	1932	6	NIC	ENSG00000124839.13	novel	1603	6	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_4	275.726241043539	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-237591113	False	NA	-7	True	ATTAAA	-14	NA	237591129	237574325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586063_237586158_237590466
transcript_58338.known	chr2	-	1077	5	FSM	ENSG00000124839.13	ENST00000409822.1	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	308.586596436073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCAGCCTCTGGACAG	-237590750	False	NA	NA	False	NA	NA	NA	237590780	237574737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237590466
transcript_58339.known	chr2	-	1792	5	FSM	ENSG00000124839.13	ENST00000392001.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	289.626807288276	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGAAGTTTTTGAGG	-237591055	False	NA	-3	True	ATTAAA	-18	NA	237591071	237574321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237585997_237586158_237590466
transcript_58341.nnic	chr2	-	1748	5	NIC	ENSG00000124839.13	novel	1603	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_3	314.195003142953	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-237589596	True	NA	-7	True	ATTAAA	-14	NA	237591097	237574325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_237575129_237575386_237575481_237577256_237577383_237586063_237586158_237590466
transcript_58349.known	chr2	+	1301	3	FSM	ENSG00000234949.2	ENST00000452801.1	1301	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCCGGGTGCAGTGG	237591017	True	NA	NA	False	AATAAA	-16	NA	237591168	237595981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237591268_237591871_237592032_237594939
transcript_58360.known	chr2	+	857	3	FSM	ENSG00000132329.11	ENST00000404910.6	857	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTACCTCTGGAAAG	237858879	True	NA	-92	True	NA	NA	NA	237858892	237912010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237859128_237877223_237877363_237911527
transcript_58361.known	chr2	+	823	3	FSM	ENSG00000132329.11	ENST00000254661.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAAGACTCATTATCT	237859585	True	NA	4	True	ATTAAA	-16	NA	237859622	237912106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237859728_237877223_237877363_237911527
transcript_58365.known	chr2	+	984	11	FSM	ENSG00000184182.19	ENST00000417231.5	984	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	165.945894797069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGGGCTTCTGAAGA	237962177	True	NA	8	True	CATAAA	-14	NA	237967025	238041542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237973648_237973748_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58372.known	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	26.5873821368124	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	237962165	True	NA	NA	False	NA	NA	NA	237967013	238042782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58380.known	chr2	+	760	9	FSM	ENSG00000184182.19	ENST00000455999.5	760	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	138.481722620713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATCTTCATGACTG	237962169	True	NA	-54	True	NA	NA	NA	237967017	238041480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58383.known	chr2	+	1242	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	130.796597815081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	237966919	False	NA	-44	True	NA	NA	NA	237966944	238041886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58388.known	chr2	+	1138	9	FSM	ENSG00000184182.19	ENST00000409332.5	1138	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	139.181929053308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTGTACAATTCA	237962233	True	NA	-13	True	NA	NA	NA	237967081	238041917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58389.known	chr2	+	924	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	136.705374345707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	237962232	True	NA	7	True	NA	NA	NA	237967080	238041770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58392.known	chr2	+	552	8	FSM	ENSG00000184182.19	ENST00000416292.5	552	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	140.584929665237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCGGAATAAAGTGGATGA	237962165	True	NA	NA	False	NA	NA	NA	237967013	238041293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_58400.known	chr2	+	2450	12	FSM	ENSG00000132330.18	ENST00000254663.12	2450	12	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_9	71.2726113171598	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	238055528	True	NA	11	True	AATAAA	-17	NA	238061000	238099413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_58406.nic	chr2	+	1490	10	ISM	ENSG00000132330.18	ENST00000254663.12	2450	12	-1	4564	-1	0	5prime_fragment	FALSE	canonical	3	237	junction_9	63.3721128838074	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	238055527	True	NA	6	True	ATTAAA	-18	NA	238060999	238094849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
transcript_58409.known	chr2	+	5668	11	FSM	ENSG00000132330.18	ENST00000480357.5	5668	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	146.910891359354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	238060911	False	NA	10	True	AATAAA	-16	NA	238060927	238099412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238094523_238096800_238096877_238098201
transcript_58413.known	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	28.8663351695786	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	238055558	True	NA	36	True	NA	NA	NA	238061030	238092083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_58416.nic	chr2	+	1085	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	133.973152368508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTCTGTGTCTCTTC	238055527	True	NA	8	True	TTTAAA	-10	NA	238060999	238091470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_58417.nic	chr2	+	1674	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	-1	-24	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	133.973152368508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	238055527	True	NA	12	True	NA	NA	NA	238060999	238092059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_58420.nic	chr2	+	1523	6	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	153.768137141607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	238055527	True	NA	36	True	NA	NA	NA	238060999	238092083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_238061144_238064356_238064470_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_58423.known	chr2	+	807	4	FSM	ENSG00000132330.18	ENST00000416757.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_3	14.7044966667418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACGCCTGCAAATAGGC	238055618	True	NA	NA	False	AATAAA	-16	NA	238061090	238069836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296
transcript_58424.known	chr2	+	458	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	238055493	True	NA	4	True	AATAAA	-17	NA	238060965	238068231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064
transcript_58426.known	chr2	+	770	2	FSM	ENSG00000132330.18	ENST00000487197.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGATGATGAACTAAAT	238055640	True	NA	NA	False	GATAAA	-13	NA	238061112	238065095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356
transcript_58427.known	chr2	-	1455	12	FSM	ENSG00000132323.9	ENST00000254654.8	1455	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	21.1202773585595	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238200002	True	NA	-3	True	AATAAA	-22	NA	238203695	238170401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194804_238194871_238203498
transcript_58428.nic	chr2	-	1415	12	NIC	ENSG00000132323.9	novel	1455	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	63.4992028322449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238199949	True	NA	-3	True	AATAAA	-22	NA	238203642	238170401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189862_238189973_238194274_238194332_238194781_238194871_238203498
transcript_58431.known	chr2	-	1861	11	FSM	ENSG00000132323.9	ENST00000463129.5	1861	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	54.0822521720388	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238199945	True	NA	-3	True	AATAAA	-22	NA	238203638	238170401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189862_238189973_238194274_238194871_238203498
transcript_58435.known	chr2	-	691	3	FSM	ENSG00000186235.12	ENST00000409942.5	881	3	186	4	60	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAATTTATTCACCG	-238231508	False	NA	NA	False	AATAAA	-14	NA	238231525	238225115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_238225500_238227683_238227799_238231333
transcript_58436.known	chr2	+	4003	15	FSM	ENSG00000204104.12	ENST00000391993.7	4003	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	16.7008493001685	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTCAAATTGTATCATA	NA	False	NA	3	True	AGTAAA	-16	NA	238320440	238400822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238320786_238325305_238325375_238325808_238325971_238328685_238328830_238328925_238329343_238332823_238332896_238333959_238334036_238347454_238347476_238348763_238348849_238349324_238349409_238352826_238352951_238353172_238353210_238356003_238356081_238397458_238397680_238398753
transcript_58438.nnic	chr2	+	1164	5	NNC	ENSG00000065802.12	novel	6891	5	NA	NA	-18	81	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	51.3438165702551	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGTTCTGGATTTTC	238423226	True	NA	31	True	ACTAAA	-21	NA	238426985	238446732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_238427120_238433553_238433696_238435710_238435864_238444341_238444728_238446383
transcript_58440.known	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.3369119475886	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	238423167	True	NA	17	True	AATAAA	-24	NA	238426926	238452250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
transcript_58442.known	chr2	+	878	4	FSM	ENSG00000065802.12	ENST00000409297.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	40.8765077873451	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGATGTCCTCGTAG	238423244	True	NA	-84	True	NA	NA	NA	238427003	238446617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238427120_238433553_238433696_238444341_238444728_238446383
transcript_58446.known	chr2	+	384	2	FSM	ENSG00000222020.4	ENST00000409526.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTAAATATCTCATTA	239401393	False	NA	4	True	AATAAA	-16	NA	239401435	239402357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_239401537_239402074
transcript_58447.known	chr2	+	401	2	FSM	ENSG00000222020.4	ENST00000691044.1	493	2	42	50	12	-13	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATTTTACATTTCCTT	239401652	True	NA	-9	True	AATAAA	-3	NA	239401761	239402344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_239401893_239402074
transcript_58448.known	chr2	-	4991	11	FSM	ENSG00000130414.13	ENST00000677979.1	4991	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	375.832263117471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATACCTGGTGATTATA	-240015190	True	NA	-4	True	AATAAA	-15	NA	240025389	239957373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240017814_240017906_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58451.known	chr2	-	4855	10	FSM	ENSG00000130414.13	ENST00000252711.7	4855	10	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_5	80.7961923072989	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTGGTGATTATATT	-240015143	True	NA	-2	True	AATAAA	-17	NA	240025342	239957371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58452.known	chr2	-	4798	10	FSM	ENSG00000130414.13	ENST00000678914.1	4798	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	300.280157252367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATACCTGGTGATTATA	-240015190	True	NA	-4	True	AATAAA	-15	NA	240025389	239957373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014840_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58453.known	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	297.775082906545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-240015141	True	NA	-8	True	NA	NA	NA	240025340	239969220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58454.known	chr2	-	2509	10	FSM	ENSG00000130414.13	ENST00000448880.6	2509	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	299.289075339017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATATACACATATTTAT	-240015190	True	NA	NA	False	AATAAA	-12	NA	240025389	239972239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239973662_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58458.known	chr2	-	1332	9	FSM	ENSG00000130414.13	ENST00000679158.1	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	314.487653771972	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTGGTTTCAGCGCT	-240015190	True	NA	-111	True	AAAACA	-32	NA	240025389	239960832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58462.known	chr2	-	699	4	FSM	ENSG00000130414.13	ENST00000407129.3	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_3	43.8482230730809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTCCTAAGTATCTTC	-240015108	True	NA	NA	False	AATAAA	-33	NA	240025307	240018406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_240018640_240021196_240021413_240022171_240022341_240025226
transcript_58463.known	chr2	-	640	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	954	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240136165	False	NA	-24	True	ATTAAA	-15	NA	240136176	240130827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_240131089_240133932_240134006_240135870
transcript_58465.known	chr2	-	418	3	FSM	ENSG00000172428.11	ENST00000607357.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	1691	junction_2	125.5	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240122613	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_240131089_240133932_240134006_240136221
transcript_58466.nic	chr2	+	790	5	ISM	ENSG00000063660.9	ENST00000495100.1	3525	7	6501	0	-839	0	3prime_fragment	FALSE	canonical	3	180	junction_4	20.3776838723148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTCAGCCTGGAGA	240464675	False	NA	7	True	AATACA	-16	NA	240464687	240466358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_58467.known	chr2	+	3719	9	FSM	ENSG00000063660.9	ENST00000264039.7	3719	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_8	21.802737786801	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	240433657	True	NA	14	True	AATAAA	-15	NA	240435662	240468076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_58468.nic	chr2	-	1041	10	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-3	8055	-1	5461	5prime_fragment	FALSE	canonical	3	204	junction_9	20.1482162308218	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCTTCCTTCAGCC	-240820104	False	NA	NA	False	NA	NA	NA	240820220	240782589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_58469.nic	chr2	-	1024	9	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-3	8508	-1	5008	5prime_fragment	FALSE	canonical	3	204	junction_8	18.3469173159962	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCCCGGCCCGGCTT	-240820104	False	NA	-10	True	NA	NA	NA	240820220	240783042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_58476.known	chr2	-	2626	5	FSM	ENSG00000122085.17	ENST00000455202.6	2626	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.5271087757411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTCATGTGATTTGTAA	-241100441	True	NA	NA	False	ATTAAA	-12	NA	241102331	241087224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241097242_241097428_241102252
transcript_58482.known	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	5.90668171555645	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	-241100397	True	NA	-19	True	AATAAA	-16	NA	241102287	241095570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
transcript_58483.known	chr2	-	585	3	FSM	ENSG00000122085.17	ENST00000480298.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCCTGCCCCACTTTT	-241100421	True	NA	NA	False	NA	NA	NA	241102311	241088904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241089366_241089979_241090045_241102252
transcript_58484.nnic	chr2	-	1429	3	NIC	ENSG00000122085.17	novel	1587	4	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	48	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTAGTACATCATAGCA	-241100419	True	NA	-14	True	AATAAA	-21	NA	241102309	241095565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_241096439_241099395_241099895_241102252
transcript_58485.known	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	39	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	-241100409	True	NA	NA	False	NA	NA	NA	241102299	241095868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241096439_241097242_241097428_241102252
transcript_58486.known	chr2	-	789	2	FSM	ENSG00000122085.17	ENST00000475860.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCGGAGGTTGCAGTG	-241100424	True	NA	NA	False	NA	NA	NA	241102314	241099167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241099895_241102252
transcript_58493.known	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	116.152305292195	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	241147845	True	NA	8	True	TATAAA	-18	NA	241150466	241183652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_58496.known	chr2	+	976	9	FSM	ENSG00000115685.15	ENST00000438799.5	976	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	194.531127007993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTCTGGGTAAGTTTA	241149194	True	NA	NA	False	AATAGA	-41	NA	241149575	241169856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241149709_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780
transcript_58497.known	chr2	+	959	9	FSM	ENSG00000115685.15	ENST00000423280.5	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	195.85960373441	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCGGCAGATCGATGC	241149231	True	NA	NA	False	NA	NA	NA	241149612	241182784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_58498.known	chr2	+	1009	9	FSM	ENSG00000115685.15	ENST00000404405.7	1009	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	187.659224060529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241150405	False	NA	18	True	AATAAA	-19	NA	241150417	241167174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158532_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_58499.known	chr2	+	965	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_8	98.8610135493259	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147858	True	NA	18	True	AATAAA	-19	NA	241150479	241167174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_58504.known	chr2	+	1954	9	FSM	ENSG00000115685.15	ENST00000272983.12	1954	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	197.415765264581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGCCGTTGCAAT	241149276	False	NA	-11	True	AATAAA	-40	NA	241149657	241182985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_58505.known	chr2	+	883	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	202.710913089834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	241149210	True	NA	16	True	AATAAA	-17	NA	241149591	241167172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_58510.known	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	204.506673709776	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147874	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_5852.known	chr1	-	839	4	FSM	ENSG00000134222.16	ENST00000459765.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	199.1520915169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGTGATGTGGTGA	-109276868	True	NA	NA	False	AATAAA	-19	NA	109283145	109281403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109282061_109282517_109282576_109282679_109282732_109283073
transcript_58520.known	chr2	-	6372	28	FSM	ENSG00000115677.18	ENST00000391975.5	6372	28	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_27	253.745571025023	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCGCCTGTGTGTTCT	-241267290	True	NA	-4	True	AATAAA	-41	NA	241272886	241227263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241272760
transcript_58521.known	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_27	228.763779783896	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	-241315256	False	NA	-11	True	AATAAA	-26	NA	241315292	241229211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
transcript_58522.known	chr2	-	6322	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_27	209.416322570907	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-241302653	True	NA	-31	True	AATAAA	-14	NA	241315672	241227290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_58533.known	chr2	+	3446	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1524.30486630588	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241288591	True	NA	NA	False	AATAAA	-20	NA	241315860	241354024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_58538.known	chr2	+	3333	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1520.35177337118	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288658	True	NA	NA	False	AATAAA	-23	NA	241315927	241354027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_58541.known	chr2	+	3701	13	FSM	ENSG00000168385.18	ENST00000391973.6	3701	13	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1128.88168297952	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241315074	False	NA	NA	False	AATAAA	-20	NA	241315099	241354024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315611_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_58554.known	chr2	+	3251	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	349.882797836965	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288655	True	NA	NA	False	AATAAA	-23	NA	241315924	241354027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_58577.known	chr2	+	3267	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	1193.23719005717	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288613	True	NA	NA	False	AATAAA	-23	NA	241315882	241354027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_58590.known	chr2	-	6238	28	FSM	ENSG00000115677.18	ENST00000427183.6	6238	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_26	457.941044240413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCTGCCGCCTGTGTGT	-241267235	True	NA	-7	True	AATAAA	-38	NA	241272831	241227266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241267577_241267709_241268476_241268542_241272760
transcript_58594.known	chr2	+	659	5	FSM	ENSG00000168385.18	ENST00000473479.5	659	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1660.44602441633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAACACCTGGATT	241288666	True	NA	NA	False	NA	NA	NA	241315935	241336336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335958
transcript_58595.known	chr2	+	749	5	FSM	ENSG00000168385.18	ENST00000475474.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	492.381140479609	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTACATCCTTTCTAT	241288605	True	NA	NA	False	TATAAA	-41	NA	241315874	241336381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974
transcript_58598.known	chr2	+	740	4	FSM	ENSG00000168385.18	ENST00000482304.5	740	4	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	434.941630822139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGACTGTTGAATGAAA	241288594	True	NA	NA	False	NA	NA	NA	241315863	241335599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125
transcript_586.known	chr1	-	524	5	FSM	ENSG00000116251.11	ENST00000471204.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3253.49284423679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAAGACGAGGATTAA	-6209193	False	NA	NA	False	NA	NA	NA	6209244	6186691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6208680_6208740_6209134
transcript_58610.known	chr2	+	839	3	FSM	ENSG00000006607.14	ENST00000479427.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	28	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTAGTACTTTAAAAAT	241353186	True	NA	NA	False	NA	NA	NA	241356298	241395984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241356389_241373083_241373291_241395442
transcript_58611.known	chr2	+	617	6	FSM	ENSG00000006607.14	ENST00000478489.5	617	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.255972819919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTAGCACTTCTCAG	241353182	True	NA	NA	False	ATTAAA	-16	NA	241356294	241405403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241356389_241373083_241373291_241395442_241395459_241403827_241403933_241404798_241404842_241405251
transcript_58612.known	chr2	-	2210	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	250.340528411381	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	-241508604	False	NA	-4	True	AATAAA	-18	NA	241508688	241495016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
transcript_58613.known	chr2	-	2459	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_10	253.244960463185	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-241508611	False	NA	-1	True	AATAAA	-40	NA	241508695	241494706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_58614.nic	chr2	-	1996	11	NIC	ENSG00000115694.15	novel	2210	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	279.699195565522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	-241496978	True	NA	-9	True	AATAAA	-13	NA	241508609	241495021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508504
transcript_58615.known	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	282.324299343857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
transcript_58616.nic	chr2	-	1994	11	NIC	ENSG00000115694.15	novel	2459	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	351.561715776903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	-241496964	True	NA	-9	True	AATAAA	-13	NA	241508595	241495021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501527_241501709_241508442
transcript_58622.known	chr2	+	2626	5	FSM	ENSG00000176720.6	ENST00000318407.5	2626	5	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_1	33.1888535505522	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556083	True	NA	38	True	AATAAA	-28	NA	241558744	241574131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296
transcript_58623.known	chr2	-	2076	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_5	36.29876030941	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241635482	True	NA	-2	True	AATAAA	-38	NA	241637158	241584404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_58625.known	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	202.644238753536	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241616863	True	NA	-2	True	AATAAA	-38	NA	241617501	241584404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
transcript_58628.known	chr2	-	833	5	FSM	ENSG00000176946.13	ENST00000402545.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	234.826930951286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAGGATTTTGAATAT	-241616852	True	NA	-24	True	AATAAA	-16	NA	241617490	241584426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241584726_241601814_241602000_241602969_241603080_241606313_241606474_241617411
transcript_58630.nic	chr2	+	1647	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	205.092647559195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	241626224	True	NA	-24	True	NA	NA	NA	241637640	241672592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_58632.known	chr2	+	2414	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	212.914823866781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	241626281	True	NA	15	True	ATTAAA	-22	NA	241637697	241672631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_58636.known	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_12	86.483941990535	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	241626276	True	NA	92	True	AAAACA	-3	NA	241637692	241673857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_58638.known	chr2	+	3294	13	FSM	ENSG00000168397.17	ENST00000405546.7	3294	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	195.726903703434	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGTCTATTTTTT	NA	False	NA	89	True	NA	NA	NA	241637212	241673854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671426_241672190
transcript_58639.known	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	196.745376198668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	241626195	True	NA	12	True	ATTAAA	-19	NA	241637611	241672628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
transcript_58656.known	chr2	+	807	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	91.2761378090316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	241626290	True	NA	NA	False	NA	NA	NA	241637706	241659448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
transcript_58658.known	chr2	+	556	6	FSM	ENSG00000168397.17	ENST00000479554.5	556	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	368.695321369827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTTTCCCCTCAGAGCTT	241626276	True	NA	-58	True	NA	NA	NA	241637692	241654705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241651883_241651975_241653511_241653611_241654545
transcript_58661.known	chr2	+	1103	6	FSM	ENSG00000168397.17	ENST00000483778.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	287.531146138988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCATTGCCTTTTTCAC	241626245	True	NA	NA	False	NA	NA	NA	241637661	241659772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241659107
transcript_58664.known	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	106.161433675323	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	241626276	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
transcript_58668.known	chr2	+	1566	13	FSM	ENSG00000168397.17	ENST00000344376.9	1566	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	213.441248746972	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-24	True	NA	NA	NA	241651006	241672592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_58674.known	chr2	-	1051	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_3	203.794473673846	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-241674825	True	NA	-9	True	AGTAAA	-15	NA	241686815	241675746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
transcript_58681.known	chr2	-	1089	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	386.09411633262	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	NA	False	NA	-9	True	AGTAAA	-15	NA	241686944	241675746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
transcript_58683.nnic	chr2	-	931	4	NIC	ENSG00000168393.13	novel	1089	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	510.541542547388	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-241674834	True	NA	-9	True	AGTAAA	-15	NA	241686824	241675746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_241676238_241678451_241678650_241685806_241685878_241686653
transcript_58685.known	chr2	-	890	2	FSM	ENSG00000168393.13	ENST00000464603.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCTCCCACCTCAGCA	-241674791	True	NA	NA	False	NA	NA	NA	241686781	241685115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241685878_241686653
transcript_58687.known	chr2	+	946	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.1322481591264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTGCCTGTGCT	241697515	True	NA	NA	False	AATAAA	-21	NA	241702045	241724036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
transcript_58688.nic	chr2	+	1501	7	ISM	ENSG00000168395.16	ENST00000406941.5	946	8	-34	-2	-23	0	intron_retention	FALSE	canonical	0	0	junction_4	64.3186511743591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTGCCTGTGCTGA	241697481	True	NA	NA	False	AATAAA	-23	NA	241702011	241724038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209
transcript_58689.known	chr2	+	822	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.643737178681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGAGGATGGTGAG	241697504	True	NA	NA	False	NA	NA	NA	241702034	241712380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
transcript_58691.known	chr2	+	543	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	7.84573486395988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCTTACGCCTG	241697515	True	NA	NA	False	NA	NA	NA	241702045	241711623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
transcript_58693.known	chr2	+	1235	8	FSM	ENSG00000220804.10	ENST00000456398.5	1235	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.56666534317997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	242088632	242140638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182_242116233_242118964_242119058_242122286_242122456_242138783_242138889_242140233
transcript_58694.known	chr2	+	557	4	FSM	ENSG00000220804.10	ENST00000444990.6	577	4	20	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_3	5.31245915016974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGCATATGAGGAGCTT	242088243	True	NA	NA	False	AAAACA	-45	NA	242088678	242116372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182
transcript_58696.known	chr20	-	1576	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	78.4199591940725	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-290652	True	NA	-13	True	AATAAA	-18	NA	290750	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
transcript_58697.nnic	chr20	-	1526	10	NNC	ENSG00000196476.12	novel	1576	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	78.3039345936046	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287999	True	NA	-13	True	AATAAA	-18	NA	290455	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_271268_275967_276049_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_58698.nic	chr20	-	1564	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	295	0	-26	0	3prime_fragment	FALSE	canonical	3	108	junction_2	60.9573824006232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287999	True	NA	-13	True	AATAAA	-18	NA	290455	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_58700.nnic	chr20	-	1410	9	NNC	ENSG00000196476.12	novel	1420	9	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	86.775212474531	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-288001	True	NA	-13	True	AATAAA	-18	NA	290457	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_271268_275967_276049_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_58701.known	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	69.173581481661	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287973	True	NA	-13	True	AATAAA	-18	NA	290429	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_58702.nic	chr20	-	2270	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-26	0	intron_retention	FALSE	canonical	3	115	junction_8	58.1162627841812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287999	True	NA	-13	True	AATAAA	-18	NA	290455	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_58705.nic	chr20	-	2434	8	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-26	0	intron_retention	FALSE	canonical	3	115	junction_7	61.7480066603823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287999	True	NA	-13	True	AATAAA	-18	NA	290455	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_271268_275967_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_58707.nnic	chr20	-	1269	7	NNC	ENSG00000196476.12	novel	1420	9	NA	NA	11521	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	92.597696155646	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-278337	False	571	-13	True	AATAAA	-18	NA	278908	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_278610
transcript_58710.known	chr20	-	1608	11	FSM	ENSG00000196476.12	ENST00000400269.4	1608	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	79.8533656147316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-290719	False	NA	-13	True	AATAAA	-18	NA	290778	270862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290586
transcript_58711.known	chr20	+	504	5	FSM	ENSG00000125841.13	ENST00000608467.5	504	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	103.608337019759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAAAGTCTTGTTGA	345701	True	NA	NA	False	AATGAA	-12	NA	347119	359405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_349248_349364_349637_349833_355325_355350_359258
transcript_58712.known	chr20	+	2088	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	33.0689515339624	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	346659	False	NA	12	True	AATAAA	-20	NA	347023	354868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_349248_349364_349637_349833_353209
transcript_58713.known	chr20	+	846	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	68.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCATAACCCCCTCTC	346518	False	NA	NA	False	NA	NA	NA	346882	353680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_349248_349364_353209
transcript_58714.known	chr20	-	1411	3	FSM	ENSG00000225377.6	ENST00000414676.6	1411	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTTGTGTTTGT	-324742	True	NA	-2	True	NA	NA	NA	325269	319686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_320782_322377_322566_325141
transcript_58716.known	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.0213499897497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	380744	False	NA	NA	False	AATAAA	-18	NA	380759	397559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_381170_388010_388302_391286_391580_396197
transcript_58717.nnic	chr20	+	2026	4	NNC	ENSG00000101255.12	novel	1533	5	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.3986054683958	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	381247	False	NA	NA	False	AATAAA	-18	NA	381259	397559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_381340_388010_388302_391286_391580_396197
transcript_58720.known	chr20	+	3701	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	31.9356274013939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCTTGGTAATGCC	406651	True	NA	NA	False	ATTAAA	-28	NA	408298	432139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_58721.known	chr20	+	2599	11	FSM	ENSG00000125826.21	ENST00000640614.1	2599	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	31.1069124150887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATGAGTGTGATGTCC	407144	True	NA	6	True	ATTAAA	-14	NA	408064	430964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_58723.known	chr20	+	1200	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	32.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	407157	False	NA	26	True	AATAAA	-19	NA	408077	410764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409880_410026_410411
transcript_58724.known	chr20	+	1024	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	47.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406657	True	NA	26	True	AATAAA	-19	NA	408304	410764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409829_410026_410411
transcript_58725.known	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406695	False	NA	26	True	AATAAA	-19	NA	408342	410764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_410411
transcript_58726.known	chr20	-	2822	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	212.686423621489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGAATATCTGTGTC	-525542	True	NA	-14	True	NA	NA	NA	543732	472507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_58727.known	chr20	-	4295	14	FSM	ENSG00000101266.19	ENST00000645840.1	4295	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	285.601161882509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGTCTTTAATTTTT	-525600	True	NA	-14	True	ACTAAA	-29	NA	543790	481154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_500030_500116_505117_505230_508450_508661_543671
transcript_58729.known	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_12	269.9979618595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-525600	True	NA	-4	True	NA	NA	NA	543790	472497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_58732.known	chr20	-	2319	13	FSM	ENSG00000101266.19	ENST00000644003.1	2319	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	342.04997807338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGGAGCAGAGCCACTA	-525545	True	NA	-107	True	NA	NA	NA	543735	482886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_543671
transcript_58733.known	chr20	-	12912	13	FSM	ENSG00000101266.19	ENST00000646561.1	12912	13	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_12	64.1501602145743	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	NA	False	NA	-4	True	NA	NA	NA	543835	472497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_58738.known	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	225.186570948485	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-525602	True	NA	31	True	AATAAA	-17	NA	543792	481109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
transcript_58739.known	chr20	-	2545	12	FSM	ENSG00000101266.19	ENST00000642689.1	2545	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	230.766813719065	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTATTTATCAAGGT	-525542	True	NA	-29	True	AATAAA	-4	NA	543732	482710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499832_499935_505117_505230_508450_508661_543671
transcript_58747.known	chr20	-	1419	3	FSM	ENSG00000101266.19	ENST00000642160.1	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_2	41	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCGCCCAGGCTGGA	-525626	True	NA	NA	False	NA	NA	NA	543816	504165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_505230_508450_508661_543671
transcript_58748.known	chr20	-	2586	13	FSM	ENSG00000101266.19	ENST00000645234.1	2586	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.242504026159	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGGTTTTATTTATCA	-525522	True	NA	-33	True	NA	NA	NA	543712	482714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484091_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_58749.known	chr20	-	2654	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_4	10.507140429251	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	-775644	False	NA	-7	True	AATAAA	-18	NA	776015	760079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
transcript_58752.known	chr20	+	8154	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_6	34.1402336775183	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	1109711	True	NA	NA	False	ATTAAA	-23	NA	1118601	1172246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
transcript_58753.known	chr20	+	2042	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	221.092300986614	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	1109707	True	NA	20	True	AATAAA	-24	NA	1118597	1167328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
transcript_58756.known	chr20	-	209	2	FSM	ENSG00000286787.2	ENST00000620712.2	294	2	26	59	17	-59	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTTCATGAAATCCACT	-1118360	True	NA	NA	False	NA	NA	NA	1118450	1117846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1117989_1118383
transcript_58757.nnic	chr20	-	848	6	NNC	ENSG00000088832.18	novel	1514	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1211.59719379008	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363160	True	NA	-6	True	AATAAA	-25	NA	1393120	1368977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_1369040_1369771_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_58758.known	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.1234753829798	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	-1313431	True	NA	NA	False	AATAAA	-20	NA	1313639	1309974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
transcript_58761.known	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_4	263.802009090151	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363094	True	NA	-6	True	AATAAA	-25	NA	1393054	1368977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_58763.known	chr20	-	1520	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1463.7313809424	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363148	True	NA	-6	True	AATAAA	-25	NA	1393108	1368977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
transcript_58764.known	chr20	-	1452	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	1198.68381522772	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363145	True	NA	-6	True	AATAAA	-25	NA	1393105	1368977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
transcript_58765.known	chr20	-	3564	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_3	303.611959945952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTATGCCGGCTTTTCT	-1363163	True	NA	-28	True	AATAAA	-3	NA	1393123	1368999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
transcript_58767.known	chr20	+	413	3	FSM	ENSG00000234684.8	ENST00000665859.2	438	3	21	4	0	-4	multi-exon	FALSE	canonical	2	8	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTATCTGAATTGATC	1324599	True	NA	-1	True	AATAAA	-14	NA	1325420	1359859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1325530_1350338_1350482_1359698
transcript_5877.known	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	2112	junction_8	152.036128518849	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-109403673	True	NA	-11	True	ATTAAA	-17	NA	109426448	109399041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
transcript_58770.known	chr20	-	1579	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	2934	junction_1	149.622487911707	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGTGGTTAT	-1363078	True	NA	-5	True	AATAAA	-26	NA	1393038	1368976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
transcript_58771.known	chr20	-	1404	9	FSM	ENSG00000125775.15	ENST00000339987.7	1404	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.4335696192626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	1325869	1309974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339_1313499_1318317_1318419_1319589_1319660_1320362_1320436_1325829
transcript_58772.known	chr20	-	497	4	FSM	ENSG00000088832.18	ENST00000677078.1	497	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1347.64419966432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTAGAAATCTCT	-1363113	True	NA	NA	False	AATATA	-12	NA	1393073	1372917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1373142_1375490_1375604_1392833_1392882_1392961
transcript_5878.nnic	chr1	-	935	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_8	764.365382196237	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	-109403704	True	NA	-13	True	AATAAA	-16	NA	109426479	109401849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426404
transcript_58782.known	chr20	-	2800	10	FSM	ENSG00000088833.18	ENST00000476071.5	2800	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	408.401702515163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455356	True	NA	4	True	ATTAAA	-22	NA	1466918	1442161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713_1455720_1458199_1458275_1464328_1464427_1466719
transcript_5879.nnic	chr1	-	927	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_8	739.636354906923	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	-109403711	True	NA	-13	True	AATAAA	-16	NA	109426486	109401849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426419
transcript_58793.known	chr20	-	2721	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_6	109.321772762794	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-1455287	True	NA	0	True	ATTAAA	-18	NA	1466849	1442165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_58795.known	chr20	-	1446	9	FSM	ENSG00000088833.18	ENST00000381653.9	1446	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	311.842808959899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCCCTCCTGTGT	-1455262	True	NA	NA	False	NA	NA	NA	1466824	1443734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1446150_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_58799.known	chr20	-	2611	8	FSM	ENSG00000088833.18	ENST00000353088.6	2611	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	357.320127433913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455266	True	NA	4	True	ATTAAA	-22	NA	1466828	1442161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_58805.nic	chr20	+	1031	2	ISM	ENSG00000233896.2	ENST00000446562.1	1802	4	-46	55460	-46	-55460	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAATACAGAAAGAAAG	NA	False	NA	NA	False	AAGAAA	-4	NA	1947199	1952057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_1947652_1951478
transcript_58806.known	chr20	+	536	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	2207203	False	NA	3	True	ATTAAA	-14	NA	2207226	2213151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2207520_2212908
transcript_58807.known	chr20	+	415	2	FSM	ENSG00000226644.5	ENST00000447956.5	415	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	2207193	False	NA	3	True	ATTAAA	-14	NA	2207216	2213151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2207389_2212908
transcript_58814.known	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2232.25784846662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	-2435032	True	NA	NA	False	NA	NA	NA	2470732	2461659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
transcript_58825.known	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_1	1204.088728735	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	-2435153	True	NA	NA	False	AATAAA	-26	NA	2470853	2461633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_58831.known	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3337	junction_1	655.225851647099	5338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-2435089	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_58849.known	chr20	-	3415	6	FSM	ENSG00000088876.13	ENST00000278772.9	3415	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	9.62081077664456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAACTTGTTTTATTTT	-2508354	True	NA	NA	False	AATAAA	-31	NA	2508915	2481816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_58850.known	chr20	-	819	6	FSM	ENSG00000088876.13	ENST00000381253.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5793961574144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGTTGATAAATGTTAT	-2508354	True	NA	NA	False	AATAAA	-23	NA	2508915	2491840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2492085_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_58858.known	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	236.043524491873	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2645934	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_58859.nic	chr20	+	2153	12	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	365	junction_1	242.002356384949	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2645874	True	NA	14	True	AATAAA	-16	NA	2652571	2658393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_58883.nic	chr20	-	1430	13	NIC	ENSG00000101365.21	novel	1279	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	205.959593529087	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651989	False	NA	-5	True	AATAAA	-14	NA	2664219	2658394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_58886.nnic	chr20	-	1379	13	NNC	ENSG00000101365.21	novel	1542	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.847609601432	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651986	True	NA	-5	True	AATAAA	-14	NA	2664216	2658394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_2658523_2658685_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_58889.known	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	220.847609601432	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651959	True	NA	-5	True	AATAAA	-14	NA	2664189	2658394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_58897.known	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	184.563545911263	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651989	False	NA	-5	True	AATAAA	-14	NA	2664219	2658394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_58900.known	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_1	72.8308353550362	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651986	True	NA	-5	True	AATAAA	-14	NA	2664216	2658394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_58950.known	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_10	18.074514951645	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839607	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_58953.nnic	chr20	+	2628	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	28.6965097080026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	NA	False	NA	22	True	AATAAA	-15	NA	2840692	2866732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_58957.known	chr20	+	2318	20	FSM	ENSG00000215305.10	ENST00000380469.7	2318	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.6600518780291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839565	True	NA	22	True	AATAAA	-15	NA	2840702	2866732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_58961.known	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_5	14.577029735799	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2840133	True	NA	-1	True	AATAAA	-25	NA	2840655	2835313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
transcript_58962.known	chr20	+	708	2	FSM	ENSG00000215305.10	ENST00000466415.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2865900	False	NA	22	True	AATAAA	-15	NA	2865910	2866732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2866316_2866429
transcript_58964.known	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_3	70.6179077068196	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	3028829	True	NA	26	True	AATAAA	-17	NA	3046051	3048250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
transcript_58965.nic	chr20	+	839	3	ISM	ENSG00000125901.6	ENST00000380325.4	1016	4	269	0	269	0	3prime_fragment	FALSE	canonical	3	1465	junction_2	5.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	3029098	False	NA	26	True	AATAAA	-17	NA	3046320	3048250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_3046520_3046613_3046738_3047734
transcript_58966.known	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	18.8547076349648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3154860	True	NA	0	True	AATAAA	-17	NA	3159865	3107572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
transcript_58967.known	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	21.7613316585993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3160164	False	NA	0	True	AATAAA	-17	NA	3160196	3107572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
transcript_58968.known	chr20	-	2842	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	-3154860	True	NA	-1	True	AATAAA	-29	NA	3159865	3146518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3149261_3159765
transcript_58969.known	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_5	36.1731944953718	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-3194549	True	NA	-4	True	AAGAAA	-20	NA	3204682	3190349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_58981.known	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	95.8208362156229	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	3203319	True	NA	24	True	AATAAA	-21	NA	3209497	3223860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_58985.known	chr20	+	729	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	239.606650447719	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCTCTGAGAAACTC	3203334	True	NA	NA	False	NA	NA	NA	3209512	3223618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_58988.known	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	344.26415084286	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3208790	True	NA	34	True	AATAAA	-31	NA	3208867	3223870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_58991.known	chr20	+	967	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	265.374839718379	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203334	True	NA	34	True	AATAAA	-31	NA	3209512	3223870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_58997.known	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	241.43852219561	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203346	True	NA	34	True	AATAAA	-31	NA	3209524	3223870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59.known	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00157_+_0_1000
transcript_59002.known	chr20	+	977	7	FSM	ENSG00000125877.13	ENST00000490838.6	977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.900607029384	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203310	True	NA	34	True	AATAAA	-31	NA	3209488	3223870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209536_3213257_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59003.known	chr20	-	3229	20	FSM	ENSG00000088836.14	ENST00000380059.7	3229	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_19	32.9010941225339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	-3238149	False	931	-5	True	AATAAA	-22	NA	3238166	3227416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3237892
transcript_59004.known	chr20	-	3046	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	24.3187512436363	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	-3238259	True	NA	-10	True	AATAAA	-17	NA	3239190	3227421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_59018.known	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	460.515189760338	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743507	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
transcript_59019.known	chr20	-	1734	6	FSM	ENSG00000101220.18	ENST00000399672.5	1734	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	484.126264521974	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743560	True	NA	-4	True	AATAAA	-19	NA	3767781	3753507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767208
transcript_59020.known	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_5	54.5615249053763	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743532	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
transcript_59030.known	chr20	+	1960	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.3620710629007	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	3795710	False	NA	21	True	NA	NA	NA	3795738	3805237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_59032.known	chr20	+	5372	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	3820259	True	NA	NA	False	AATACA	-14	NA	3820546	3828838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3820759_3822101_3822294_3823870
transcript_59034.known	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	3820248	True	NA	9	True	ATTAAA	-22	NA	3820535	3825302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3820703_3822101_3822294_3823870
transcript_59035.known	chr20	+	584	3	FSM	ENSG00000125843.11	ENST00000455742.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTGCACGAGGCCC	3820259	True	NA	NA	False	NA	NA	NA	3820546	3823954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3820855_3822101_3822294_3823870
transcript_59037.known	chr20	+	11731	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	11.2051575426477	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	3844180	True	NA	12	True	AATAAA	-23	NA	3846833	3876118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_59041.nic	chr20	+	1411	7	NIC	ENSG00000125779.24	novel	4815	7	NA	NA	5	71	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	155.472041073485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGGCAATCATCT	3888696	True	NA	110	True	NA	NA	NA	3888843	3923702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_3888905_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59043.known	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	129.931605940288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	3888691	True	NA	NA	False	NA	NA	NA	3888838	3926958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59045.known	chr20	+	1843	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.27176759917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3880999	True	NA	-25	True	NA	NA	NA	3889388	3923855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59047.known	chr20	+	8020	7	FSM	ENSG00000125779.24	ENST00000610179.7	8020	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	77.0203796984207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGTGTGATTGCAAAAA	3880997	True	NA	10	True	AATAAA	-22	NA	3889386	3929887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59050.nic	chr20	+	1494	7	NIC	ENSG00000125779.24	novel	1763	7	NA	NA	-27	71	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	152.336250883804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGGCAATCATCT	3889575	True	NA	110	True	NA	NA	NA	3889788	3923702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_3889933_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59052.known	chr20	+	1763	7	FSM	ENSG00000125779.24	ENST00000621507.1	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.755052913723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3889602	True	NA	-25	True	NA	NA	NA	3889815	3923855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3889933_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59055.known	chr20	-	1128	7	FSM	ENSG00000101236.17	ENST00000545616.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	30.3063066410644	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATGCCTTTGATAAG	-4014091	True	NA	3	True	NA	NA	NA	4015545	3933566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331_3974401_4015436
transcript_59058.known	chr20	+	2074	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	21.0964742193997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	4148205	True	NA	42	True	AATAAA	-45	NA	4148778	4187747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
transcript_59059.known	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	7.6029964853047	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	4148254	True	NA	22	True	AATAAA	-25	NA	4148827	4187727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
transcript_59064.known	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	4684339	True	NA	14	True	ATTAAA	-20	NA	4686455	4701588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686513_4699210
transcript_59065.known	chr20	+	2429	2	FSM	ENSG00000171867.18	ENST00000424424.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4684342	True	NA	16	True	ATTAAA	-22	NA	4686458	4701590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686513_4699215
transcript_59066.known	chr20	+	2574	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4684426	False	NA	16	True	ATTAAA	-22	NA	4686542	4701590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686737_4699210
transcript_59067.known	chr20	+	2539	2	FSM	ENSG00000171867.18	ENST00000430350.2	2539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4686214	False	NA	16	True	ATTAAA	-22	NA	4686349	4701590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686509_4699210
transcript_5907.known	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	10.4804580052591	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	109482568	True	NA	21	True	AAAAAG	-19	NA	109483904	109492734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_59075.known	chr20	-	1541	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	609.018267377917	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	-5101471	False	11605	-20	True	AATAAA	-19	NA	5113076	5099849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
transcript_59079.known	chr20	-	1231	4	FSM	ENSG00000089063.15	ENST00000612323.4	1231	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	532.42109483211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGTGCCTGCTTCTCCT	-5101482	False	11605	NA	False	NA	NA	NA	5113087	5068482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5069350_5106187_5106311_5109331_5109446_5112960
transcript_59083.nnic	chr20	-	1388	4	NNC	ENSG00000089063.15	novel	1541	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_2	501.645957490606	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	-5101512	False	NA	-20	True	AATAAA	-19	NA	5113117	5099849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_5100932_5106187_5106223_5109331_5109446_5112960
transcript_59085.known	chr20	-	1660	4	FSM	ENSG00000089063.15	ENST00000379283.6	1660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	581.030310932418	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101445	False	11605	-10	True	AATAAA	-29	NA	5113050	5099839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112719
transcript_59086.known	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	513.151266413932	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101437	False	11605	-10	True	AATAAA	-29	NA	5113042	5099839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
transcript_59087.known	chr20	-	1636	4	FSM	ENSG00000089063.15	ENST00000379279.6	1636	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	562.646326646579	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101444	False	11605	-10	True	AATAAA	-29	NA	5113049	5099839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112742
transcript_59089.known	chr20	-	1472	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	109.259121154966	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101498	False	11605	-10	True	AATAAA	-29	NA	5113103	5099839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
transcript_59094.known	chr20	-	1536	5	FSM	ENSG00000089063.15	ENST00000379277.6	1536	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	602.901888784568	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101299	False	33	-10	True	AATAAA	-29	NA	5112904	5099839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111763_5111809_5112742
transcript_59095.known	chr20	-	1735	5	FSM	ENSG00000089063.15	ENST00000379286.6	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	613.034460695318	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101437	False	11605	-10	True	AATAAA	-29	NA	5113042	5099839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112742
transcript_59097.known	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	425.664741577479	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5126321	True	NA	-2	True	AATAAA	-23	NA	5126626	5114952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
transcript_59099.known	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_5	115.475711731948	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5108353	True	NA	-2	True	AATAAA	-23	NA	5119958	5114952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
transcript_59107.known	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	20.2601140722905	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	5125541	True	NA	NA	False	AATAAA	-17	NA	5127007	5197887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_59112.known	chr20	-	910	2	FSM	ENSG00000226995.9	ENST00000666761.1	910	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGATCGTGGAGTT	NA	False	NA	NA	False	AATAAA	-3	NA	5445799	5432024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5432639_5445503
transcript_59114.known	chr20	+	585	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	5749589	True	NA	7	True	AATAAA	-18	NA	5750392	5773447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5750480_5772861_5773044_5773131
transcript_59115.known	chr20	+	1633	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	25.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5749597	True	NA	NA	False	AATAAA	-15	NA	5750400	5864395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5750480_5772861_5773044_5863023
transcript_59116.known	chr20	+	2462	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.97390157267426	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGCTTCATTGTTC	5911307	True	NA	NA	False	AATAAA	-13	NA	5911509	5925353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
transcript_59118.known	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_8	13.9298241194927	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-5946226	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_5912.known	chr1	+	9044	9	FSM	ENSG00000065135.12	ENST00000369851.7	9044	9	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	66.5709208288424	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGGCAAAAGAAAGATAAT	109534958	True	NA	NA	False	AATAAA	-29	NA	109548614	109600195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344
transcript_59123.known	chr20	-	2239	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	97.6194425079121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-5946251	True	NA	-4	True	ATTAAA	-21	NA	5950558	5937832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
transcript_59127.known	chr20	-	2976	9	FSM	ENSG00000089195.15	ENST00000466974.5	2976	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	13.9104277432436	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-5946170	True	NA	-4	True	ATTAAA	-21	NA	5950477	5937832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5938727_5941052_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_59128.nic	chr20	-	604	4	ISM	ENSG00000089195.15	ENST00000466974.5	2976	9	-86	6341	-5	-1499	5prime_fragment	FALSE	canonical	3	296	junction_1	13.6707311029399	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAAAAGTAAGTAG	-5946256	True	NA	NA	False	ATTAAA	-3	NA	5950563	5944173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_5944254_5944804_5944915_5946405_5946534_5950277
transcript_59131.known	chr20	+	3769	19	FSM	ENSG00000125885.13	ENST00000378896.7	3769	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.0523711807819	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTAATAATAGGTCTC	5950216	True	NA	NA	False	CATAAA	-45	NA	5950651	5995206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5951078_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
transcript_59133.known	chr20	+	524	1	FSM	ENSG00000275632.1	ENST00000619201.1	524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTACTGGTTTAATTT	6000407	False	NA	9	True	AATAAA	-14	NA	6000417	6000941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_6000400_6000900
transcript_59138.known	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	11.6279781795121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	10033526	True	NA	8	True	AATACA	-20	NA	10035048	10058303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_59139.nic	chr20	+	1610	4	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	-75	13250	-13	1837	5prime_fragment	FALSE	canonical	3	47	junction_3	11.8977121983832	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATTTCATCTGAAAT	10033451	True	NA	NA	False	AATAAA	-18	NA	10034973	10045053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393
transcript_59140.nic	chr20	+	1072	3	ISM	ENSG00000132623.16	ENST00000378392.6	5429	11	54	19331	-8	-4244	5prime_fragment	FALSE	canonical	3	7	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	10033518	True	NA	NA	False	TATAAA	-25	NA	10035040	10038972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10035334_10035578_10035643_10038257
transcript_59141.nic	chr20	+	999	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-67	16855	1	-4244	5prime_fragment	FALSE	canonical	3	76	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	10033527	True	NA	NA	False	TATAAA	-25	NA	10035049	10038972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10035334_10038257
transcript_59143.known	chr20	+	2050	8	FSM	ENSG00000132639.14	ENST00000304886.6	2050	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.29362644830535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATCTGCTTTAATTTCT	10218763	True	NA	NA	False	ATTAAA	-15	NA	10218832	10307418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_10218978_10275428_10275564_10277684_10277727_10284723_10284773_10292881_10293000_10296924_10297051_10299267_10299413_10306128
transcript_59153.known	chr20	-	6714	6	FSM	ENSG00000125863.20	ENST00000347364.7	6714	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	553.010162655263	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTAGTATTGTGG	-10420278	True	NA	NA	False	AATAAA	-23	NA	10434222	10401008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10434107
transcript_59158.nnic	chr20	-	1171	5	NIC	ENSG00000125863.20	novel	6714	6	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	559.990792335017	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTGTATTTGTTTTC	-10420312	True	NA	0	True	AATAAA	-26	NA	10434256	10405183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_10405688_10407615_10407727_10408627_10408804_10420527_10420759_10434107
transcript_5916.known	chr1	+	3728	18	FSM	ENSG00000116337.20	ENST00000342115.8	3728	18	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	27.3493356257433	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	109617219	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_59160.known	chr20	-	6181	7	FSM	ENSG00000125863.20	ENST00000651692.1	6181	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	394.695839293443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCATCACATACATTA	-10420270	True	NA	NA	False	AATAAA	-9	NA	10434214	10401620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10428729_10428817_10434107
transcript_59161.nic	chr20	-	1099	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-365	8585	-341	-8336	5prime_fragment	FALSE	canonical	3	1249	junction_1	112.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTCTCGTTTGGAA	NA	False	NA	2	True	AATAAA	-28	NA	10434563	10413519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_59162.nic	chr20	-	911	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-365	8773	-341	-8524	5prime_fragment	FALSE	canonical	3	1249	junction_1	112.5	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCATTAAATCATTCTA	NA	False	NA	-14	True	AATAAA	-17	NA	10434563	10413707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_59165.known	chr20	+	6056	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	6.17433793856409	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	10433790	True	NA	1	True	AGTAAA	-15	NA	10435304	10628030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_59174.nic	chr20	+	2439	3	ISM	ENSG00000149346.15	ENST00000334534.10	6056	8	-107	69673	-107	-69673	5prime_fragment	FALSE	canonical	3	11	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATTCGCTGATGTT	10435075	False	NA	NA	False	NA	NA	NA	10435197	10558357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10435454_10458175_10458232_10556230
transcript_59178.known	chr20	+	4686	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	25.9169346181218	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	29	True	AATAAA	-28	NA	11890722	11926609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_5918.nnic	chr1	+	1360	9	NNC	ENSG00000168765.18	novel	1394	8	NA	NA	20	261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	54.0069439979712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAGAGATGTGTCTC	109655492	False	NA	NA	False	ATTAAA	-5	NA	109656141	109662003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164_109661695_109661988
transcript_59182.known	chr20	-	2342	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	9.62676249904493	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-13637152	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_59189.nnic	chr20	-	1949	10	NIC	ENSG00000089123.16	novel	2342	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	26.9402631349023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-13637152	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_59193.known	chr20	-	3188	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_13	23.7763245575816	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATAGCACTGAT	-13777554	True	NA	-8	True	AATAAA	-18	NA	13784919	13714324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59195.nic	chr20	-	2348	13	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-55	3095	-55	-3095	5prime_fragment	FALSE	canonical	3	295	junction_12	24.1745676739466	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGCAGCTCATGA	-13777609	True	NA	NA	False	NA	NA	NA	13784974	13717419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59196.nic	chr20	-	2055	10	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-56	19430	-56	-19430	5prime_fragment	FALSE	canonical	3	295	junction_9	25.6534357432313	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAAAGACTGA	-13777610	True	NA	NA	False	GATAAA	-33	NA	13784975	13733754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59197.nic	chr20	-	2243	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-384	45419	-384	-45419	5prime_fragment	FALSE	canonical	3	295	junction_8	26.8418400077193	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGGCAAAGAAAA	-13785270	True	NA	83	True	AATACA	-30	NA	13785303	13759743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59198.nic	chr20	-	964	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-384	68319	-384	-68319	5prime_fragment	FALSE	canonical	3	295	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAAAACATTG	-13785270	True	NA	NA	False	NA	NA	NA	13785303	13782643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13783184_13784879
transcript_59199.nic	chr20	-	495	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-103	68507	-103	-68507	5prime_fragment	FALSE	canonical	3	295	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCGATTCAAAAAATCT	-13784989	False	NA	NA	False	AATAAA	-26	NA	13785022	13782831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13783184_13784879
transcript_59202.nic	chr20	+	1178	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	43.9592222763381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783493	True	NA	14	True	AATAAA	-18	NA	13785064	13817228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_59207.known	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	36.3938510835857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	13784983	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_59210.nic	chr20	+	1096	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	39.1821387879733	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783477	True	NA	14	True	AATAAA	-18	NA	13785048	13817228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_59212.known	chr20	+	5449	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	27.3468462532702	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	13783456	True	NA	NA	False	GATAAA	-15	NA	13785027	13821580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_5922.known	chr1	+	1394	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	11.5511285781335	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	109655449	True	NA	13	True	AATAAA	-13	NA	109656098	109661700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_59220.known	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	51.4934971322941	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783478	True	NA	14	True	AATAAA	-18	NA	13785049	13817228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_59223.known	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	43.5430821141545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783516	True	NA	14	True	AATAAA	-18	NA	13785087	13817228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_5923.known	chr1	+	1321	8	FSM	ENSG00000168765.18	ENST00000326729.9	1321	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	51.4805293092367	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATCTTAGTGGTGTC	109655472	True	NA	3	True	AATAAA	-17	NA	109656121	109665496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109665010
transcript_59233.known	chr20	+	1105	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTATGGTGATTTCT	13994915	True	NA	NA	False	AATAAA	-15	NA	13995501	14053679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
transcript_59239.known	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	388.094239700732	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	16712173	True	NA	12	True	AATAAA	-17	NA	16729960	16741776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_5924.known	chr1	+	1166	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	7.23088613419644	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	109667408	True	NA	NA	False	AGTAAA	-13	NA	109668056	109675286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
transcript_59240.known	chr20	+	2411	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_1	398.899075233601	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGAGTTTGGGCAATT	16712238	True	NA	NA	False	AATAAA	-23	NA	16730025	16742564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_59245.nic	chr20	+	423	4	ISM	ENSG00000125870.11	ENST00000377943.9	1588	7	31	4438	31	-4438	5prime_fragment	FALSE	canonical	3	831	junction_1	500.336109252792	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGCCAAAAC	16712204	True	NA	NA	False	AAGAAA	-9	NA	16729991	16737338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260
transcript_59246.nic	chr20	+	523	4	ISM	ENSG00000125870.11	ENST00000246071.8	2411	7	-34	5226	31	-4438	5prime_fragment	FALSE	canonical	3	801	junction_1	514.376213377805	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGCCAAAAC	16712204	True	NA	NA	False	AAGAAA	-9	NA	16729991	16737338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260
transcript_59253.known	chr20	+	1853	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	905.915283014919	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	17556679	True	NA	19	True	AATAAA	-19	NA	17570081	17608242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
transcript_59259.known	chr20	+	3405	4	FSM	ENSG00000125868.16	ENST00000246069.12	3405	4	0	0	0	0	multi-exon	FALSE	canonical	3	1982	junction_2	160.37941125829	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTTGACTGTGAAGT	17556672	True	NA	8	True	AATAAA	-20	NA	17570074	17609919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17607036
transcript_5926.known	chr1	+	1159	7	FSM	ENSG00000168765.18	ENST00000495742.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	56.7090527752551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	109655602	False	NA	13	True	AATAAA	-13	NA	109656251	109661700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_59265.known	chr20	-	3792	26	FSM	ENSG00000125844.17	ENST00000377807.6	3792	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	168.283332508006	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	-17669964	True	NA	-2	True	ATTAAA	-21	NA	17682283	17613677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658604_17658690_17659979_17660529_17679998_17680076_17682027
transcript_59266.nnic	chr20	-	1073	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	-18058754	True	NA	-37	True	AATAAA	-18	NA	18059081	18024261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_59267.known	chr20	-	990	3	FSM	ENSG00000125850.11	ENST00000494030.1	990	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	NA	False	NA	-37	True	AATAAA	-18	NA	18059188	18024261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_18024953_18041533_18041724_18059079
transcript_59279.known	chr20	-	2288	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_13	152.050871275443	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-17968946	False	NA	-22	True	AATAAA	-20	NA	17968980	17941596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
transcript_59294.known	chr20	-	2025	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	235.928823423977	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-17950358	True	NA	-22	True	AATAAA	-20	NA	17968800	17941596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
transcript_5930.known	chr1	-	4046	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.92820323027551	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCCATGTGCCTAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	109740516	109733931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
transcript_5932.nnic	chr1	+	2348	17	NNC	ENSG00000168710.18	novel	4313	17	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	198.210973065948	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	109971314	True	NA	NA	False	NA	NA	NA	109984781	110022389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_109984948_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_59328.known	chr20	-	562	3	FSM	ENSG00000089006.17	ENST00000481323.1	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	23	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATTGCATCAAGCGTC	-17950369	True	NA	NA	False	NA	NA	NA	17968811	17967918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17968290_17968374_17968454_17968699
transcript_5933.known	chr1	+	3943	17	FSM	ENSG00000168710.18	ENST00000369799.10	3943	17	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_1	35.8808248755516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCCGTATGTGTCA	109971297	True	NA	24	True	ATTAAA	-25	NA	109984764	110023742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109985173_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_59331.known	chr20	-	1087	1	FSM	ENSG00000089006.17	ENST00000606557.1	1087	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	-17968740	False	NA	-10	True	AATAAA	-33	NA	17968774	17967687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17967700_17968800
transcript_59335.known	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	230.104867397454	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963895	True	NA	NA	False	AATAAA	-22	NA	17969072	17991122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
transcript_59339.known	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	45.2071620431984	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17968039	False	NA	NA	False	AATAAA	-22	NA	17969017	17991122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
transcript_5934.known	chr1	+	2503	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	197.255376590221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	110004119	False	NA	NA	False	NA	NA	NA	110004130	110022389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_59343.nnic	chr20	+	2181	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	215.449916840705	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17967956	True	NA	NA	False	AATAAA	-22	NA	17968934	17991122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_17969142_17969800_17970371_17975683_17975904_17989938
transcript_59345.nic	chr20	+	2011	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	230.275680194173	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17968039	False	NA	NA	False	AATAAA	-22	NA	17969017	17991122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_17969142_17969800_17970371_17988165_17988299_17989938
transcript_59346.known	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	242	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963937	False	NA	NA	False	AATAAA	-22	NA	17969114	17991122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17969142_17969800_17970371_17989938
transcript_59347.known	chr20	+	740	3	FSM	ENSG00000125871.14	ENST00000467391.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	254.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAATTTGTTGAAATG	17970028	True	NA	NA	False	NA	NA	NA	17970056	17990231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17970371_17988165_17988299_17989938
transcript_59348.nic	chr20	+	907	2	ISM	ENSG00000125871.14	ENST00000377710.10	2231	5	-145	20684	-145	-19793	5prime_fragment	FALSE	canonical	3	514	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGAGGTTTGGTTTTGTT	17968840	False	NA	NA	False	AATAGA	-18	NA	17968872	17970438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_17969142_17969800
transcript_59351.known	chr20	+	3917	12	FSM	ENSG00000149474.15	ENST00000678777.1	3917	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	131.104651908565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTAGGTGTTCTCAAA	18131734	True	NA	-25	True	NA	NA	NA	18137848	18188327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18183534_18183582_18184601_18184793_18187285
transcript_59352.known	chr20	+	3927	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	107.371364897723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	18137783	False	NA	22	True	AATAAA	-24	NA	18137841	18188374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_59355.nic	chr20	+	3595	11	FSM	ENSG00000149474.15	ENST00000688188.1	3564	11	-31	0	-9	0	multi-exon	FALSE	canonical	3	56	junction_5	112.767947573768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTACCTGTTGTACC	18137773	True	NA	22	True	AATAAA	-18	NA	18137831	18188035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_59359.known	chr20	+	1151	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	0	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	18131748	True	NA	12	True	AATAAA	-18	NA	18137862	18143169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207
transcript_59362.known	chr20	+	2654	7	FSM	ENSG00000125846.16	ENST00000425686.3	2654	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	17.3557547292598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	18286957	True	NA	19	True	AATAAA	-25	NA	18288526	18316996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_59365.known	chr20	+	2717	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.4997142833819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_59367.known	chr20	+	2642	5	FSM	ENSG00000125846.16	ENST00000401790.5	2642	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.5712833908056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_59368.known	chr20	+	2318	5	FSM	ENSG00000125846.16	ENST00000628216.2	2318	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.0249843945008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	18286941	True	NA	14	True	AATAAA	-20	NA	18288510	18316991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18297984_18298063_18305680_18305808_18306297_18306394_18315068
transcript_59369.nnic	chr20	+	2231	4	NIC	ENSG00000125846.16	novel	2642	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	12.657891697365	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18286953	True	NA	17	True	AATAAA	-23	NA	18288522	18316994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315068
transcript_59370.known	chr20	+	523	4	FSM	ENSG00000125846.16	ENST00000434018.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.9555060627944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTCCTGAGGGAGAAG	18286959	True	NA	NA	False	NA	NA	NA	18288528	18315279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18315068
transcript_59371.known	chr20	+	1999	2	FSM	ENSG00000125846.16	ENST00000630056.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18286959	True	NA	17	True	AATAAA	-23	NA	18288528	18316994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18315071
transcript_59378.nic	chr20	-	2345	10	NIC	ENSG00000089091.16	novel	3295	20	NA	NA	-23	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	13.64994460261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	-18412752	True	NA	2	True	AATAAA	-21	NA	18413245	18383366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_5938.known	chr1	+	3214	2	FSM	ENSG00000162775.17	ENST00000654015.1	3214	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	110333980	True	NA	22	True	AATAAA	-20	NA	110339424	110346677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110342269_110346307
transcript_59381.nic	chr20	-	1846	6	ISM	ENSG00000089091.16	ENST00000476058.5	1709	7	187	0	187	0	3prime_fragment	FALSE	canonical	3	34	junction_5	5.57135531087365	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	-18394413	True	NA	2	True	AATAAA	-21	NA	18394516	18383366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253
transcript_5939.known	chr1	-	694	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	1185.13944327239	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-110394757	True	NA	-23	True	AATAAA	-21	NA	110407668	110401248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
transcript_59391.known	chr20	-	837	6	FSM	ENSG00000089091.16	ENST00000480488.2	837	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	13.6293800299207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTAAGTGTCTTTTTTTG	-18412729	True	NA	NA	False	GATAAA	-44	NA	18413222	18393713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_59393.known	chr20	+	2156	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	8.78119439484174	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	18465634	True	NA	NA	False	AATAAA	-21	NA	18467389	18484646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_59400.nnic	chr20	-	2913	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9662694607246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-18495854	True	NA	NA	False	ATTAAA	-20	NA	18497242	18486539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_18487692_18488638_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_59405.known	chr20	-	3843	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	12.2678441463853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-18495837	True	NA	NA	False	ATTAAA	-20	NA	18497225	18486539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_59408.known	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	97.0557426148254	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18507509	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_59413.known	chr20	+	2680	20	FSM	ENSG00000101310.17	ENST00000643747.1	2680	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	179.181534095076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	18498908	True	NA	-18	True	NA	NA	NA	18507889	18561055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524486_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_59414.known	chr20	+	3026	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	98.8923979443877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18498958	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_5942.known	chr1	-	1154	4	FSM	ENSG00000134248.14	ENST00000474861.6	1154	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	1105.4544565723	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-110394760	True	NA	-23	True	AATAAA	-21	NA	110407671	110401248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032
transcript_59420.known	chr20	+	3351	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	161.299518368899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18498958	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_5943.known	chr1	-	620	4	FSM	ENSG00000134248.14	ENST00000602318.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	2164	junction_3	128.315583188048	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTTCTAGATTCTT	-110394783	True	NA	-27	True	AATAAA	-17	NA	110407694	110401252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407585
transcript_59433.known	chr20	+	490	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	18557875	True	NA	12	True	AATAAA	-18	NA	18567431	18569560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18567597_18569235
transcript_59434.known	chr20	+	575	2	FSM	ENSG00000232388.5	ENST00000435844.3	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	1201	junction_1	0	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTTTTCTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	18567346	18569563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18567597_18569238
transcript_59435.known	chr20	+	670	2	FSM	ENSG00000232388.5	ENST00000608034.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTAAGACTTTAATGAC	18557890	True	NA	NA	False	NA	NA	NA	18567446	18569155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18567597_18568635
transcript_59438.known	chr20	+	3953	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	26.7058046124808	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAGAATGGGGTGGAC	18577839	True	NA	NA	False	NA	NA	NA	18588053	18766644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
transcript_59440.known	chr20	+	1539	1	FSM	ENSG00000273148.1	ENST00000609087.1	1539	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGGCCTTTGTTTA	18794357	False	NA	13	True	AATAAA	-25	NA	18794528	18796067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18794500_18796100
transcript_59445.known	chr20	+	1222	7	FSM	ENSG00000173418.12	ENST00000484480.5	1222	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	316.536332827687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010104	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20018361_20018518_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_59447.known	chr20	+	1040	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_2	62.6469472520409	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	20010156	True	NA	58	True	AATACA	-43	NA	20017361	20033655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_59449.known	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	279.930683384298	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010104	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
transcript_59451.known	chr20	+	1000	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	299.897795090261	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010153	True	NA	32	True	TATAAA	-35	NA	20017358	20033629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
transcript_59454.known	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	27.3225311795809	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-20047606	True	NA	-14	True	AGTAAA	-24	NA	20052466	20034367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
transcript_59459.nic	chr20	-	1245	5	ISM	ENSG00000101343.15	ENST00000536226.2	4015	14	-9	12907	-9	-11133	5prime_fragment	FALSE	canonical	3	215	junction_1	30.589009464185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAAGCACTTTTTTCTC	-20047615	True	NA	NA	False	NA	NA	NA	20052475	20047274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
transcript_59460.nic	chr20	-	984	2	ISM	ENSG00000101343.15	ENST00000536226.2	4015	14	-9	15455	-9	-13681	5prime_fragment	FALSE	canonical	3	289	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGGAA	-20047615	True	NA	NA	False	NA	NA	NA	20052475	20049822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_20050623_20052291
transcript_59461.known	chr20	-	1164	4	FSM	ENSG00000225127.4	ENST00000668281.1	1164	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCTTTTGCGTCTGAGT	-21102253	False	130	NA	False	ATTAAA	-12	NA	21102383	21085578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21085889_21087943_21088031_21093196_21093853_21102272
transcript_59462.known	chr20	-	1139	4	FSM	ENSG00000225127.4	ENST00000655093.1	1139	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGCGTCTGAGTTTT	-21106223	True	NA	NA	False	ATTAAA	-15	NA	21106353	21085575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21085889_21087943_21088031_21093196_21093853_21106270
transcript_59464.known	chr20	-	1288	2	FSM	ENSG00000225127.4	ENST00000420705.2	1288	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	21106514	21092808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21093853_21106270
transcript_59466.known	chr20	-	1155	2	FSM	ENSG00000225127.4	ENST00000668193.1	1155	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	-21102253	False	130	NA	False	AATAAA	-16	NA	21102383	21092808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21093853_21102272
transcript_5947.known	chr1	+	817	3	FSM	ENSG00000224699.10	ENST00000457535.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	NA	False	NA	NA	False	TATAAA	-29	NA	110407524	110416274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110407955_110412172_110412294_110416008
transcript_59474.nic	chr20	+	2147	13	NIC	ENSG00000088970.16	novel	2102	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_7	32.5451609306207	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21120881	True	NA	NA	False	AATAAA	-20	NA	21125982	21246622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_59475.known	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	25.5259943761039	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21120980	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_5948.known	chr1	+	1821	4	FSM	ENSG00000224699.10	ENST00000609512.6	1821	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	110407611	True	NA	NA	False	TATAAA	-29	NA	110407804	110416274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110409159_110412172_110412294_110414151_110414232_110416008
transcript_59480.known	chr20	+	2014	12	FSM	ENSG00000088970.16	ENST00000620891.4	2014	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2347907772213	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21120905	True	NA	NA	False	AATAAA	-20	NA	21126006	21246622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21126205_21132096_21132160_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_59485.known	chr20	+	1875	11	FSM	ENSG00000088970.16	ENST00000616848.4	1875	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	49.1456000065113	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTGTTAATATGT	21120950	True	NA	NA	False	AATAAA	-16	NA	21126051	21246618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21126205_21132096_21132160_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_59492.nnic	chr20	+	749	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-28001	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	57.1057022064329	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21190147	True	NA	NA	False	AATAAA	-20	NA	21190457	21246622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_21190545_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_59494.nnic	chr20	+	803	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-28001	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	51.1572206486024	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21190147	True	NA	NA	False	AATAAA	-20	NA	21190457	21246622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_21190545_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_59498.nic	chr20	+	1613	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-43	40948	0	-27240	5prime_fragment	FALSE	canonical	3	103	junction_3	12.7235564559949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGGCCAGGCGCCGTG	21120937	True	NA	NA	False	TTTAAA	-14	NA	21126038	21205674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_59499.nic	chr20	+	1957	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-99	40660	0	-26952	5prime_fragment	FALSE	canonical	3	103	junction_3	12.7235564559949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGATGTGCAGATTA	21120881	True	NA	NA	False	NA	NA	NA	21125982	21205962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_5950.known	chr1	+	1569	9	FSM	ENSG00000143119.14	ENST00000648608.1	1569	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.14694550466471	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATTGCTATATATC	110871095	True	NA	15	True	AATAAA	-20	NA	110871187	110899922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110871260_110873155_110873249_110891391_110891472_110892344_110892534_110894326_110894402_110894959_110895056_110896652_110896734_110897808_110897893_110899123
transcript_59506.nic	chr20	+	447	3	ISM	ENSG00000088970.16	ENST00000620553.2	558	5	-77	9104	0	102	5prime_fragment	FALSE	canonical	3	135	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTTCCTGTTTTTTAC	21120881	True	NA	14	True	AATACA	-21	NA	21125982	21136551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21126205_21132096_21132160_21136389
transcript_59507.known	chr20	-	391	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	21166596	21166205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21166200_21166600
transcript_59509.known	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_5	69.6090150926163	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284189	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_59519.nic	chr20	+	1379	14	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-47	50751	-47	-50751	5prime_fragment	FALSE	canonical	3	807	junction_5	64.4968693336828	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAATGAAGGTGAGT	21284142	True	NA	25	True	AAGAAA	-4	NA	21303283	21339074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043
transcript_59523.nic	chr20	+	1349	13	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-47	55639	-47	-55639	5prime_fragment	FALSE	canonical	3	807	junction_5	57.0041421496914	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTTCTATTGCAGT	21284142	True	NA	8	True	AAAAAG	-17	NA	21303283	21334186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077
transcript_59531.nnic	chr20	+	940	4	NIC	ENSG00000088930.8	novel	3408	30	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	476.110864773695	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284148	True	NA	25	True	AATAAA	-19	NA	21303289	21389825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_21303474_21381993_21382058_21386867_21387007_21389272
transcript_59532.known	chr20	+	693	4	FSM	ENSG00000234435.3	ENST00000449427.3	693	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTGTGGTATTTTGT	22054054	True	NA	NA	False	AATAAA	-16	NA	22054073	22074654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_22054285_22068438_22068689_22073387_22073467_22074501
transcript_59533.known	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	23347083	True	NA	13	True	AATACA	-14	NA	23350790	23354771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_23351062_23353980
transcript_59535.known	chr20	-	514	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	170	8	103	0	multi-exon	FALSE	canonical	2	11	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	-23357925	True	NA	NA	False	AATAAA	-16	NA	23358005	23356593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23356970_23357050_23357138_23357954
transcript_59540.known	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	31.1738672608966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-23419445	True	NA	-2	True	AATAAA	-19	NA	23421488	23374521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
transcript_59545.known	chr20	-	3824	10	FSM	ENSG00000125814.17	ENST00000398425.7	3824	10	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_7	28.0321684700953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	NA	False	NA	1	True	AATAAA	-22	NA	23421519	23374518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
transcript_5955.known	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	40.4749579644281	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-110960442	True	NA	-11	True	NA	NA	NA	110963922	110947189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
transcript_59553.known	chr20	-	749	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23750176	True	NA	0	True	ATTAAA	-14	NA	23750935	23747561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23747900_23749015_23749130_23750638
transcript_59555.known	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.52447456836295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	24469572	True	NA	45	True	NA	NA	NA	24469628	24666616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
transcript_59557.nnic	chr20	+	2016	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	7.11805216802087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	24469497	True	NA	45	True	NA	NA	NA	24469876	24666616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_59558.known	chr20	-	2117	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	271.779367670465	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	-24983082	False	NA	-1	True	AATAAA	-34	NA	24992642	24962924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_59561.known	chr20	-	2202	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	48.048803314963	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	-24983191	True	NA	-1	True	AATAAA	-34	NA	24992751	24962924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_59565.nnic	chr20	-	2030	8	NIC	ENSG00000101474.12	novel	2202	9	NA	NA	-40	-19	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	222.951536785693	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGCTGATTAACCTTTT	-24983231	False	NA	-20	True	AATAAA	-15	NA	24992791	24962943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_24964023_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_59566.nic	chr20	-	1148	8	ISM	ENSG00000101474.12	ENST00000217456.3	2202	9	-40	5963	-40	-5963	5prime_fragment	FALSE	canonical	3	611	junction_1	40.4822964582126	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAAAACTGTTATTCCA	-24983231	False	NA	-12	True	ATTAAA	-20	NA	24992791	24968887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_59570.known	chr20	+	4104	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	71.3073614426895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	25190643	True	NA	NA	False	NA	NA	NA	25195711	25228075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_59572.known	chr20	+	2766	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	68.5488430066549	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190632	True	NA	28	True	AATAAA	-29	NA	25195700	25226729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_59574.known	chr20	+	2708	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	68.2292515658113	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190624	True	NA	28	True	AATAAA	-29	NA	25195692	25226729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_5958.nnic	chr1	-	1231	3	NNC	ENSG00000121931.16	novel	3313	4	NA	NA	0	70160	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTTAATTTCCTGG	-110960442	True	NA	-10	True	AATAAA	-25	NA	110963922	110877029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_110877686_110949850_110950124_110963620
transcript_59580.nic	chr20	+	2630	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	78	junction_9	84.9730349385419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190600	True	NA	28	True	AATAAA	-29	NA	25195668	25226729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_59582.nic	chr20	+	2392	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	72.1646939684189	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190618	True	NA	28	True	AATAAA	-29	NA	25195686	25226729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_59585.nic	chr20	+	2290	12	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	89.9940310233668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190618	True	NA	28	True	AATAAA	-29	NA	25195686	25226729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_5959.known	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	45.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-110960485	True	NA	-43	True	AAAAAG	-20	NA	110963965	110947221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110948400_110949850_110950124_110963620
transcript_59593.known	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_16	21.8268177318447	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	25246187	True	NA	33	True	ATTAAA	-24	NA	25248084	25298012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
transcript_59597.nnic	chr20	+	2092	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	199.522184332511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398159	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25446849_25448077
transcript_59600.nnic	chr20	+	2178	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	199.522184332511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398159	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25446940_25448082
transcript_59601.nnic	chr20	+	2299	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	199.522184332511	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398159	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447061_25448082
transcript_59602.nnic	chr20	+	2285	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	199.522184332511	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398159	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447067_25448102
transcript_59605.known	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	28.0455977928008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398169	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
transcript_59614.nnic	chr20	+	2202	7	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	259.546024606213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398177	True	NA	24	True	AATAAA	-24	NA	25407680	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447067_25448102
transcript_59622.nnic	chr20	+	2020	5	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	285.788383248865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398169	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25425210_25425328_25441701_25441777_25445922_25447067_25448102
transcript_59624.nic	chr20	+	1648	4	ISM	ENSG00000101003.10	ENST00000262460.5	3311	7	-10	29208	-10	1160	5prime_fragment	FALSE	canonical	3	538	junction_1	18.0800688297608	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATTCAATGTGTTTGC	25398159	True	NA	NA	False	AAGAAA	-10	NA	25407662	25419355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104
transcript_59627.nnic	chr20	+	1878	4	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	257.383414815761	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398194	True	NA	24	True	AATAAA	-24	NA	25407697	25448563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25441701_25441777_25445922_25447067_25448102
transcript_59629.known	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-25622931	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_25616582_25623858
transcript_59638.known	chr20	-	4237	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6.97764286847643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGGACACTGACAG	-25696168	True	NA	NA	False	ATTAAA	-16	NA	25696853	25673194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
transcript_59639.nnic	chr20	-	3150	4	NIC	ENSG00000130684.14	novel	4237	5	NA	NA	-29	0	intron_retention	FALSE	canonical	2	3	junction_1	13.8804418757713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTAGTCAGTGGTATTT	-25696197	True	NA	-6	True	AATAAA	-15	NA	25696882	25674214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_25677038_25685995_25686123_25686390_25686467_25696758
transcript_59640.known	chr20	+	320	2	FSM	ENSG00000226465.4	ENST00000376445.3	320	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTCTAAGAATGTAT	25751169	True	NA	NA	False	AGTAAA	-12	NA	25751217	25752761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25751339_25752562
transcript_59645.nnic	chr20	-	1253	11	NNC	ENSG00000282826.3	novel	1098	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_9	55.8086014875843	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	-28600854	True	NA	-3	True	AATAAA	-27	NA	28602843	28580632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28600590_28600720_28601656_28601757_28602608
transcript_59649.nnic	chr20	-	1402	10	NIC	ENSG00000282826.3	novel	1098	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	51.1338113841191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	-28600843	True	NA	-3	True	AATAAA	-27	NA	28602832	28580632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602319
transcript_59650.nic	chr20	-	1124	10	FSM	ENSG00000282826.3	ENST00000687441.1	1098	10	-27	1	0	0	multi-exon	FALSE	canonical	3	59	junction_1	41.4901445980299	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	-28600854	True	NA	-3	True	AATAAA	-27	NA	28602843	28580632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_59656.known	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	59	junction_1	42.703739590345	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	-28600675	False	NA	-33	True	AAAAAG	-37	NA	28602664	28580708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_59657.nic	chr20	-	2274	9	NIC	ENSG00000282826.3	novel	976	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_8	43.9614532858048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTGAGTTGTTGTGA	-28600855	True	NA	-5	True	AATAAA	-25	NA	28602844	28580634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_28582030_28583018_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_59660.nic	chr20	-	955	9	FSM	ENSG00000282826.3	ENST00000689811.1	1022	9	67	0	1	0	multi-exon	FALSE	canonical	3	13	junction_7	54.6029703862345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600783	True	NA	0	True	TATAAA	-16	NA	28602772	28583024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601602_28601757_28602608
transcript_59662.known	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	67	junction_1	43.8776708588776	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600772	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_59665.nic	chr20	-	2197	8	NIC	ENSG00000282826.3	novel	1048	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_7	38.4590956838084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTGAGTTGTTGTGA	-28600855	True	NA	-5	True	AATAAA	-25	NA	28602844	28580634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_59667.nic	chr20	-	873	8	FSM	ENSG00000282826.3	ENST00000686484.1	875	8	-1	3	0	0	multi-exon	FALSE	canonical	3	61	junction_7	45.525503056764	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600855	True	NA	0	True	TATAAA	-16	NA	28602844	28583024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_59670.nic	chr20	-	895	8	ISM	ENSG00000282826.3	ENST00000687441.1	1098	10	-27	2393	0	0	5prime_fragment	FALSE	canonical	3	69	junction_7	38.4909212725308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600854	True	NA	0	True	TATAAA	-16	NA	28602843	28583024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_59673.nic	chr20	-	796	7	ISM	ENSG00000282826.3	ENST00000358464.10	1025	9	0	2392	0	0	5prime_fragment	FALSE	canonical	3	61	junction_6	37.2771154105751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600855	True	NA	0	True	TATAAA	-16	NA	28602844	28583024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_59675.nnic	chr20	+	1275	8	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-198	78	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	49.453750812125	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	30376076	True	NA	NA	False	AATAAA	-27	NA	30377173	30399335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_30377722_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398046_30399221
transcript_59677.known	chr20	+	1585	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	291.711651292848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	31501604	True	NA	-24	True	AAGAAA	-11	NA	31514454	31569444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_59679.known	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	284.874485031956	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	31501591	True	NA	25	True	ATTAAA	-18	NA	31514441	31569543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
transcript_59680.known	chr20	+	1809	13	FSM	ENSG00000101294.18	ENST00000674240.1	1809	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	266.26396676982	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501577	True	NA	49	True	ATTAAA	-42	NA	31514427	31569567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
transcript_59684.known	chr20	+	1606	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_4	65.4784047423523	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501577	True	NA	49	True	ATTAAA	-42	NA	31514427	31569567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_59693.nic	chr20	+	1522	11	NIC	ENSG00000101294.18	novel	1715	13	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	3	175	junction_10	176.486146765122	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	31501551	True	NA	25	True	ATTAAA	-18	NA	31514401	31569543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31569119
transcript_59695.nic	chr20	+	1548	11	NIC	ENSG00000101294.18	novel	1606	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	229.092645015068	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501551	True	NA	49	True	ATTAAA	-42	NA	31514401	31569567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_597.known	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3071.06597490549	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	-6199502	False	NA	NA	False	NA	NA	NA	6199553	6186722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
transcript_59732.known	chr20	+	983	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	31596266	True	NA	12	True	ATTAAA	-19	NA	31605288	31606510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31605814_31606052
transcript_59733.known	chr20	+	1233	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	31596260	True	NA	17	True	ATTAAA	-24	NA	31605282	31606515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31605300_31606500
transcript_59735.known	chr20	-	2227	3	FSM	ENSG00000171552.14	ENST00000422920.2	2227	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	64.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTAGGGTGGCCCTTGC	-31722038	False	1491	NA	False	GGGGCT	-26	NA	31723529	31665258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721843_31722331_31722617
transcript_59737.known	chr20	-	2496	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	41.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721482	False	NA	NA	False	AATAAA	-25	NA	31722973	31664451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721843_31722349_31722617
transcript_59739.nnic	chr20	-	2457	3	NNC	ENSG00000171552.14	novel	2373	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	161	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-31721077	False	NA	NA	False	AATAAA	-19	NA	31722568	31664457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_31666087_31721654_31722331_31722416
transcript_59740.nnic	chr20	-	2432	3	NIC	ENSG00000171552.14	novel	2441	3	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	173.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-31721079	False	NA	NA	False	AATAAA	-19	NA	31722570	31664457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_31666087_31721654_31722331_31722443
transcript_59741.known	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	102	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722038	False	1491	NA	False	AATAAA	-14	NA	31723529	31664462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31722617
transcript_59742.known	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	155.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722487	False	NA	NA	False	AATAAA	-14	NA	31723978	31664462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31723734
transcript_59743.known	chr20	-	2426	3	FSM	ENSG00000171552.14	ENST00000439267.2	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	155	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31723863
transcript_59744.known	chr20	-	2574	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	125	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-31720068	True	NA	NA	False	AATAAA	-19	NA	31722868	31664457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31722617
transcript_59745.known	chr20	-	2562	3	FSM	ENSG00000171552.14	ENST00000456404.6	2562	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	167.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722487	False	NA	NA	False	AATAAA	-14	NA	31723978	31664462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31723734
transcript_59746.known	chr20	-	2444	3	FSM	ENSG00000171552.14	ENST00000420488.6	2444	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31723863
transcript_59747.known	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721106	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654
transcript_59748.known	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	174.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721075	False	2800	NA	False	AATAAA	-14	NA	31722566	31664462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31722443
transcript_59749.known	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_1	80.692247176078	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	31720988	True	NA	20	True	AATAAA	-20	NA	31739289	31801800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_59751.nnic	chr20	+	3188	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-23	-306	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_16	225.085020461127	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGATTAAGTCATGGT	31720946	True	NA	17	True	AATAAA	-17	NA	31739247	31801494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798385_31798553_31800969
transcript_59752.nnic	chr20	+	3494	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_16	225.085020461127	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	31720946	True	NA	20	True	AATAAA	-20	NA	31739247	31801800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798385_31798553_31800969
transcript_5976.known	chr1	-	2098	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_9	34.8502971275216	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCATCTACAAAAACAGT	-111136388	True	NA	NA	False	ATTAAA	-24	NA	111140093	111117162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_59762.nic	chr20	+	608	2	ISM	ENSG00000088325.16	ENST00000340513.4	3605	19	-23	59031	-23	-59026	5prime_fragment	FALSE	canonical	3	807	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAAAATCACCCACTA	31720946	True	NA	NA	False	NA	NA	NA	31739247	31742774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_31739622_31742540
transcript_59763.known	chr20	-	1957	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	24.8935232540514	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTGTCCAGTGTGA	-31947811	True	NA	0	True	AATAAA	-26	NA	31952046	31944336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
transcript_59768.known	chr20	+	3768	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	30.1738904985762	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	32103309	True	NA	13	True	AATAAA	-17	NA	32109713	32167256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_5977.nic	chr1	-	2042	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	64.490213632155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111136457	True	NA	-4	True	AATAAA	-13	NA	111140162	111117332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_59770.nnic	chr20	+	2089	18	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_17	69.6521262067506	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTCTTGAATCTCA	32103309	True	NA	12	True	AATAAA	-16	NA	32109713	32167255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32166972
transcript_59774.known	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	5.79511288357124	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	32204673	True	NA	28	True	AATAAA	-42	NA	32207879	32238658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_59776.nnic	chr20	-	587	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32483333	False	NA	NA	False	AATAAA	-19	NA	32483371	32464779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_32465118_32474600_32474743_32483264
transcript_59777.known	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32481255	True	NA	NA	False	AATAAA	-19	NA	32483582	32464779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_32465118_32474600_32474743_32483361
transcript_59780.known	chr20	-	1343	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_8	141.912329890676	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	-32740746	True	NA	-55	True	AATAAA	-13	NA	32743455	32702702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
transcript_59782.nnic	chr20	-	1227	7	NIC	ENSG00000149600.12	novel	1362	9	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	191.577153010362	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGATCCAGTTGTCTT	-32740764	True	NA	-51	True	AATAAA	-17	NA	32743473	32702698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_32703459_32704022_32704072_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728143_32743307
transcript_59792.known	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_3	113.811857417797	1131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	32797887	True	NA	19	True	AATAAA	-20	NA	32819953	32850405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
transcript_59811.known	chr20	-	2164	15	FSM	ENSG00000101391.21	ENST00000357886.8	2164	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	126.927345439855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394955	True	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33383479_33383522_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_59818.nnic	chr20	-	1893	14	NNC	ENSG00000101391.21	novel	2164	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_13	96.5166080076469	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394958	True	NA	-15	True	ATTAAA	-21	NA	33401564	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396853_33401427
transcript_59820.known	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_9	41.6312354286251	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394913	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_59826.nic	chr20	-	1889	13	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	97.0601188267698	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394933	True	NA	-15	True	ATTAAA	-21	NA	33401539	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_59832.nic	chr20	-	1668	12	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	106.131526072352	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394929	True	NA	-15	True	ATTAAA	-21	NA	33401535	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33401427
transcript_59840.nic	chr20	-	1633	11	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	105.648284415792	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394929	True	NA	-15	True	ATTAAA	-21	NA	33401535	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33401427
transcript_59847.nic	chr20	-	1422	10	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	145.15968218942	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394929	True	NA	-15	True	ATTAAA	-21	NA	33401535	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33401427
transcript_59859.known	chr20	-	840	6	FSM	ENSG00000101391.21	ENST00000482967.5	840	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	161.480153579318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394898	True	NA	-15	True	ATTAAA	-21	NA	33401504	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33401427
transcript_5986.nic	chr1	-	1407	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	-6	217	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	64.490213632155	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAGTTTTTTATACCT	-111136396	True	NA	-30	True	AATAAA	-16	NA	111140101	111117906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_59860.known	chr20	-	1930	14	FSM	ENSG00000101391.21	ENST00000473997.5	1930	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	99.441517409055	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394911	True	NA	-15	True	ATTAAA	-21	NA	33401517	33358838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396937_33401427
transcript_59861.known	chr20	-	5690	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTGTATATATTTT	-33719589	True	NA	NA	False	AATAAA	-17	NA	33720310	33702757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
transcript_59864.known	chr20	-	989	3	FSM	ENSG00000101417.12	ENST00000344022.7	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCTAGATTCCCAC	-33719598	True	NA	NA	False	TTTAAA	-38	NA	33720319	33707268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33707970_33714673_33714737_33720094
transcript_59866.known	chr20	+	6430	9	FSM	ENSG00000125970.12	ENST00000375114.7	6430	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	426.874030013539	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33993582	False	NA	14	True	AATAAA	-21	NA	33993645	34084884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_59875.known	chr20	-	2556	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	0	0	0	multi-exon	FALSE	canonical	3	3667	junction_8	376.82636502108	3097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGCTCCATTGCTTTTG	-34093087	True	NA	-14	True	AATAAA	-26	NA	34112243	34088308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_5988.nnic	chr1	-	1407	10	NNC	ENSG00000156171.15	novel	2098	10	NA	NA	41	217	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	75.4644876010491	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAGTTTTTTATACCT	-111136457	True	NA	-30	True	AATAAA	-16	NA	111140162	111117906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120531_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_59883.nnic	chr20	-	1404	8	NIC	ENSG00000125977.7	novel	2556	9	NA	NA	-36	-1131	combination_of_known_splicesites	FALSE	canonical	3	139	junction_2	1511.14967721228	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAATTTGGTTTGTC	-34093123	True	NA	-13	True	ATTAAA	-17	NA	34112279	34089439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34089906_34090516_34090603_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_59890.nic	chr20	-	478	3	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-103	15208	-103	-15208	5prime_fragment	FALSE	canonical	3	3667	junction_2	55	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAACTAAAAAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	34112346	34103516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_34103566_34105367_34105546_34112095
transcript_59896.nnic	chr20	-	1818	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	257	junction_1	443.589855609887	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257931	False	NA	-20	True	AATAAA	-18	NA	34303399	34280267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_34280651_34281026_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_59906.known	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_6	129.394697164609	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257887	True	NA	-20	True	AATAAA	-18	NA	34303355	34280267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_5992.known	chr1	+	2251	9	FSM	ENSG00000134255.15	ENST00000545121.5	2251	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	55.0407519479885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	111139582	False	NA	12	True	AATAAA	-21	NA	111139626	111185102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111139762_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_59925.known	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	5.98478974846513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	34358752	True	NA	NA	False	NA	NA	NA	34363272	34511773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_59927.known	chr20	+	205	2	FSM	ENSG00000078747.16	ENST00000479215.1	205	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGAGAGCAGTGTTG	34358774	True	NA	NA	False	NA	NA	NA	34363294	34369543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34363350_34369393
transcript_59929.known	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	97.6740611535234	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505623	True	NA	38	True	ACTAAA	-18	NA	34516421	34540958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
transcript_59930.known	chr20	+	1053	5	FSM	ENSG00000125971.17	ENST00000480759.1	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	325.703373485753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505615	True	NA	38	True	ACTAAA	-18	NA	34516413	34540958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34516462_34526267_34526344_34529851_34530235_34534627_34534796_34540580
transcript_59931.known	chr20	+	1464	3	FSM	ENSG00000125971.17	ENST00000300469.13	1464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTATCACTTGAA	34505645	True	NA	NA	False	ATTAAA	-20	NA	34516443	34531221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34516462_34526267_34526344_34529851
transcript_59936.known	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	8.09448337801893	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	-34674806	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_59943.known	chr20	-	1248	11	FSM	ENSG00000101464.11	ENST00000374820.6	1248	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	56.8665982805372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGCACAGGGCTG	-34674799	True	NA	NA	False	NA	NA	NA	34677085	34560865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34657179_34657245_34676955
transcript_59950.nnic	chr20	-	1480	10	NIC	ENSG00000101464.11	novel	1639	12	NA	NA	-110	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	58.7896438347965	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	-34674916	True	NA	-12	True	AATAAA	-22	NA	34677202	34560541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34560980_34575103_34575247_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_59954.known	chr20	+	2885	18	FSM	ENSG00000131069.20	ENST00000360596.7	2885	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	12.8975199461465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTGACTTGTTTTCT	34874860	True	NA	15	True	AATAAA	-15	NA	34876611	34927959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34876824_34882793_34882990_34913095_34913188_34913392_34913497_34913752_34913826_34914095_34914172_34914322_34914438_34919434_34919573_34920538_34920710_34921005_34921140_34921329_34921463_34921543_34921601_34921785_34921867_34923322_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
transcript_59955.known	chr20	-	2638	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	11.8599394292427	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-34869280	True	NA	-6	True	ATTAAA	-18	NA	34872856	34844719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_59957.nic	chr20	-	1514	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	15927	0	2167	5prime_fragment	FALSE	canonical	3	105	junction_2	2.49443825784929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGCAGGGGTTG	-34869280	True	NA	NA	False	NA	NA	NA	34872856	34860646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_59958.known	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_11	103.962540737244	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_5996.known	chr1	+	2203	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	20.3147114180832	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	111137574	True	NA	14	True	AATAAA	-23	NA	111140222	111185104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_59960.nic	chr20	-	1877	13	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	68.4573569619966	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	NA	False	NA	-6	True	AATAAA	-18	NA	34955817	34928432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942586_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59962.known	chr20	-	1909	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	29.1074398660472	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTCCTTACTTCGTG	-34950994	True	NA	-5	True	AATAAA	-19	NA	34955806	34928431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59966.known	chr20	-	2131	13	FSM	ENSG00000100983.12	ENST00000642498.1	2131	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	65.4647912154991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-34950971	True	NA	-46	True	NA	NA	NA	34955783	34928472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34929238_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59967.nic	chr20	-	2222	12	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	156	junction_1	29.7804639496743	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	NA	False	NA	-6	True	AATAAA	-18	NA	34955817	34928432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59969.nic	chr20	-	1729	12	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	64.1788564858763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	NA	False	NA	-6	True	AATAAA	-18	NA	34955817	34928432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34928952_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59970.nic	chr20	-	2368	12	NIC	ENSG00000100983.12	novel	2131	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	181	junction_11	21.7605298914577	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	NA	False	NA	-6	True	AATAAA	-18	NA	34955817	34928432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59976.known	chr20	-	1540	10	FSM	ENSG00000100983.12	ENST00000642538.1	1540	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	76.8405435678488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTGCCTCCATTTCTA	-34950976	True	NA	NA	False	GGGGCT	-18	NA	34955788	34928974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_59979.known	chr20	-	3019	12	FSM	ENSG00000100983.12	ENST00000645723.1	3019	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	71.0519539864264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-34950831	False	NA	-46	True	NA	NA	NA	34955643	34928472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34943007_34945952_34946099_34951723_34951861_34954715
transcript_59982.nnic	chr20	-	2064	12	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	66.1682053932149	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	35147362	35115365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_35115934_35117697_35117854_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_59985.known	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	20.5817880661521	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-35145644	True	NA	0	True	AATAAA	-19	NA	35147336	35115363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_59994.nnic	chr20	-	1556	9	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_4	52.0384473250308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	NA	False	NA	0	True	AATAAA	-19	NA	35147362	35115363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_59996.nnic	chr20	-	1430	8	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	60.8685435330659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	NA	False	NA	0	True	AATAAA	-19	NA	35147362	35115363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_6.known	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00022_+_0_700
transcript_60.known	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00160_+_0_700
transcript_60000.nnic	chr20	-	1061	7	NNC	ENSG00000088298.13	novel	1756	10	NA	NA	-26	-18862	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.4997812769636	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTCAACTTTGTTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	35147362	35134225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_35134481_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_60002.nic	chr20	-	1322	6	ISM	ENSG00000088298.13	ENST00000374492.8	1884	11	-26	18858	-26	-18858	5prime_fragment	FALSE	canonical	3	151	junction_1	10.5943381105192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACTTTGTTTAATTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	35147362	35134221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_60004.known	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	482.303068619722	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275599	False	NA	-6	True	ATTAAA	-32	NA	35284717	35278906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
transcript_60005.known	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_6	161.195533436879	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	-35275654	True	NA	-17	True	ATTAAA	-21	NA	35284772	35278917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
transcript_60011.known	chr20	-	932	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	442.209633544996	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	NA	False	NA	-10	True	ATTAAA	-28	NA	35284804	35278910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
transcript_60018.known	chr20	-	1017	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	488.68055772662	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275652	True	NA	-10	True	ATTAAA	-28	NA	35284770	35278910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
transcript_60021.known	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	7.76029781788188	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	35169117	True	NA	28	True	AATAAA	-19	NA	35172071	35177362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
transcript_60023.known	chr20	-	798	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	653.467843296227	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275405	False	539	-10	True	ATTAAA	-28	NA	35284523	35278910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
transcript_60025.known	chr20	-	1252	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_3	127.673646458461	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275597	False	NA	-10	True	ATTAAA	-28	NA	35284715	35278910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
transcript_60033.known	chr20	-	2267	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_9	23.4662878757307	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	-35410678	True	NA	-10	True	AATAAA	-20	NA	35411973	35302577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60036.known	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	98.0254271860113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	-35410678	True	NA	NA	False	NA	NA	NA	35411973	35303990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
transcript_60042.known	chr20	-	2133	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_6	108.228405490897	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410736	True	NA	2	True	AATAAA	-32	NA	35412031	35302565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
transcript_60047.known	chr20	-	990	8	FSM	ENSG00000101019.22	ENST00000491125.5	990	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	111.583226008799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGAAGCCCAGCTGGC	-35410681	True	NA	NA	False	NA	NA	NA	35411976	35346019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35346424_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60048.known	chr20	-	1035	7	FSM	ENSG00000101019.22	ENST00000453855.5	1035	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	113.694644650582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTTAGAAACTTGCCTG	-35410665	True	NA	19	True	ATTAAA	-43	NA	35411960	35303432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314708_35381983_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60049.known	chr20	-	1987	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.969344608344	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410663	True	NA	2	True	AATAAA	-32	NA	35411958	35302565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
transcript_60058.known	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_6	26.6207938774685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	-35410679	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60059.nic	chr20	+	1462	10	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	16.6733320005331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35452924	True	NA	7	True	AATAAA	-20	NA	35455166	35470132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_35455238_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_60060.known	chr20	+	1419	10	FSM	ENSG00000126001.16	ENST00000397524.5	1419	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	14.1325296766619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35455613	False	NA	7	True	AATAAA	-20	NA	35455723	35470132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_60063.nnic	chr20	+	1383	9	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	17.6192366463477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35452932	True	NA	7	True	AATAAA	-20	NA	35455174	35470132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_35455238_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_60065.known	chr20	+	1235	14	FSM	ENSG00000125991.21	ENST00000416206.5	1235	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	318.397782544091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCCCCCAGCCTCT	35532237	True	NA	-59	True	NA	NA	NA	35542101	35557546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35549162_35549208_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_60066.known	chr20	+	1357	14	FSM	ENSG00000125991.21	ENST00000357394.8	1357	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	318.048412823281	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35542007	False	NA	29	True	GATAAA	-24	NA	35542037	35557634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35554371_35554387_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_60077.known	chr20	+	1302	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	84.1263517309265	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35532213	True	NA	29	True	GATAAA	-24	NA	35542077	35557634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_601.known	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	4433	junction_3	985.051718890378	3388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	-6124124	True	NA	-1	True	ATTAAA	-30	NA	6199595	6185019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
transcript_60103.known	chr20	+	601	5	FSM	ENSG00000125991.21	ENST00000411577.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	345.46128581941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGTCAGGAATTTAG	35532251	True	NA	NA	False	AATAAA	-18	NA	35542115	35543909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35543657
transcript_60105.nic	chr20	+	1501	11	ISM	ENSG00000061656.11	ENST00000679710.1	1542	12	843	45	-208	0	3prime_fragment	FALSE	canonical	2	8	junction_2	15.8521291945278	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35616652	False	NA	14	True	ATTAAA	-27	NA	35616671	35621049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_35617241_35617519_35617587_35617778_35617841_35618086_35618131_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_60108.nic	chr20	+	968	9	ISM	ENSG00000061656.11	ENST00000679710.1	1542	12	1847	45	-13	0	3prime_fragment	FALSE	canonical	2	26	junction_2	12.4272885216366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35617581	True	NA	14	True	ATTAAA	-27	NA	35617675	35621049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_35617841_35618086_35618131_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_60119.known	chr20	+	453	3	FSM	ENSG00000061656.11	ENST00000430878.1	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35619458	False	NA	14	True	ATTAAA	-27	NA	35619584	35621049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35619747_35620656_35620774_35620875
transcript_60128.known	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_15	126.405625753849	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641316	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_60129.nic	chr20	-	1962	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	331	junction_15	127.971594070281	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641368	True	NA	-15	True	AATAAA	-17	NA	35664952	35626043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_60136.known	chr20	-	1695	16	FSM	ENSG00000214078.13	ENST00000397442.5	1695	16	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	217.885352115893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGACCAGTGAAGACC	-35641291	True	NA	-37	True	NA	NA	NA	35664875	35626065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626734_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_6015.known	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	90.7863425852149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-111136385	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_60159.known	chr20	-	2645	13	FSM	ENSG00000244005.13	ENST00000374085.5	2645	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	43.7209427315255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTGATAAGTGCTA	-35699176	False	NA	-12	True	AATAAA	-8	NA	35699189	35668698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35698744
transcript_6016.nic	chr1	-	886	6	NIC	ENSG00000156171.15	novel	769	6	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	105.315905731281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-111136457	True	NA	NA	False	AATAAA	-25	NA	111140162	111125377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_60160.known	chr20	-	3008	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_9	21.0480600847996	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGGCTGGGTGTG	-35697752	True	NA	NA	False	ATTAAA	-19	NA	35699352	35668051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_60161.known	chr20	-	1956	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	42.0333862013942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCACCTTCTATTTACT	-35697749	True	NA	-25	True	NA	NA	NA	35699349	35668982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_60165.known	chr20	-	1794	12	FSM	ENSG00000244005.13	ENST00000440385.5	1794	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	54.3504088498767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAAATAAACTCACCT	-35697755	True	NA	-35	True	NA	NA	NA	35699355	35668992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_60175.known	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	939.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	35681973	True	NA	14	True	AATAAA	-15	NA	35699441	35700978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699457_35699632_35699764_35700774
transcript_60176.known	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1885	junction_1	1031	2917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681936	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699457_35699632_35699764_35700797
transcript_60177.known	chr20	+	288	3	FSM	ENSG00000125995.16	ENST00000397416.1	288	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCCAACTACATCTGTC	35681982	True	NA	-54	True	NA	NA	NA	35699450	35700910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699495_35699632_35699764_35700797
transcript_60178.known	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_2	68.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	-35641316	True	NA	7	True	AATAAA	-32	NA	35664900	35648924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35659015_35664759
transcript_60179.known	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	-35641316	True	NA	-6	True	ATTAAA	-17	NA	35664900	35650325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35658983_35664759
transcript_60181.known	chr20	-	1068	3	FSM	ENSG00000244462.8	ENST00000424458.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGAAGCCACTCCC	-35641305	True	NA	NA	False	NA	NA	NA	35664889	35654449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35659015_35664801
transcript_60186.known	chr20	+	496	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681982	True	NA	16	True	AATAAA	-17	NA	35699450	35700980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699764_35700797
transcript_60188.known	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	478.702245144278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	-35711521	True	NA	NA	False	ATTAAA	-10	NA	35742266	35703223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
transcript_602.known	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	2976.84053243629	10108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-6199956	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
transcript_60205.known	chr20	-	577	6	FSM	ENSG00000131051.24	ENST00000416108.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	565.161782147378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATTAAGGTTTTTAAAC	-35710881	False	NA	NA	False	NA	NA	NA	35741626	35729471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741487
transcript_60211.known	chr20	-	2883	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	386.861875514561	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	-35711529	True	NA	-6	True	AATAAA	-17	NA	35742274	35703610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_60212.known	chr20	-	2831	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_5	267.319148853482	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGATCTTCATTTTTC	-35711567	False	NA	-5	True	AATAAA	-18	NA	35742312	35703609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_60213.known	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	397.070736204739	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-35711503	True	NA	-14	True	AATAAA	-15	NA	35742248	35704325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_60214.known	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	681.811313096715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	-35711482	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
transcript_60216.known	chr20	+	1814	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	79.9088323503936	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	35766717	True	NA	NA	False	AAAAAG	-14	NA	35772025	35913335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_6022.nic	chr1	+	2096	3	ISM	ENSG00000134255.15	ENST00000357172.9	2203	9	-8	24134	-8	0	5prime_fragment	FALSE	canonical	3	170	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTGAAATTATGGGG	111137566	True	NA	NA	False	NA	NA	NA	111140214	111160970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_111140308_111147641_111148054_111159379
transcript_60222.nic	chr20	+	1776	11	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-50	37054	-9	0	5prime_fragment	FALSE	canonical	3	180	junction_10	29.0957041502693	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	35766656	True	NA	NA	False	AATAAA	-43	NA	35771964	35913316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_60226.nnic	chr20	+	1493	10	NIC	ENSG00000025293.17	novel	1997	12	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	2	10	junction_9	75.3733096159983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAAAAGAAAAAGAAAA	35766656	True	NA	NA	False	AATAAA	-39	NA	35771964	35913312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35913248
transcript_60228.known	chr20	+	1635	10	FSM	ENSG00000025293.17	ENST00000481202.5	1635	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	76.1715088824693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	35766717	True	NA	NA	False	AATAAA	-43	NA	35772025	35913316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_6023.known	chr1	-	2246	9	FSM	ENSG00000156171.15	ENST00000286692.8	2246	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	22.6546766695091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111136335	True	NA	-4	True	AATAAA	-13	NA	111140040	111117332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500
transcript_6024.known	chr1	-	1894	12	FSM	ENSG00000162777.17	ENST00000369752.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	5.30865502569325	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGGCTTTTAC	-111204309	False	NA	1	True	AGTAAA	-20	NA	111204409	111187173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111187682_111188130_111188371_111188701_111188787_111189211_111189254_111192139_111192318_111194577_111194727_111195915_111196057_111197175_111197254_111197919_111197990_111198629_111198743_111199622_111199799_111204295
transcript_60244.nic	chr20	+	652	5	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-50	91904	-9	-4782	5prime_fragment	FALSE	canonical	3	235	junction_3	18.2277261335582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATAGCAAGTGTTTATT	35766656	True	NA	2	True	AATAAA	-16	NA	35771964	35858466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301
transcript_60247.nnic	chr20	+	480	4	NNC	ENSG00000025293.17	novel	1814	12	NA	NA	0	21505	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	21.6846079563875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	35766706	True	NA	NA	False	AATAAA	-14	NA	35772014	35823477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_35772080_35800093_35800174_35801490_35801606_35823257
transcript_60248.nnic	chr20	+	547	4	NNC	ENSG00000025293.17	novel	832	6	NA	NA	-9	21505	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	123.036579926459	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	35766656	True	NA	NA	False	AATAAA	-14	NA	35771964	35823477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_35772080_35801490_35801606_35812622_35812720_35823257
transcript_60251.nnic	chr20	+	450	3	NNC	ENSG00000025293.17	novel	832	6	NA	NA	-9	21505	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	105.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	35766656	True	NA	NA	False	AATAAA	-14	NA	35771964	35823477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_35772080_35801490_35801606_35823257
transcript_60252.known	chr20	+	618	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	35766724	True	NA	11	True	AATAAA	-22	NA	35772032	35775058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35774487
transcript_60253.known	chr20	+	5879	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_13	29.9511713353562	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	35766706	True	NA	10	True	AATAAA	-18	NA	35772014	35950370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
transcript_60254.nnic	chr20	+	762	2	NNC	ENSG00000149646.12	novel	559	5	NA	NA	-166	0	intron_retention	FALSE	canonical	3	13	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	35954363	True	NA	4	True	AATAAA	-17	NA	35954397	35955368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_35954754_35954962
transcript_60255.known	chr20	-	771	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTGTGTCTCTT	-35945125	True	NA	-5	True	AATGAA	-21	NA	35954502	35953623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35954340_35954447
transcript_60256.known	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	35954392	True	NA	4	True	AATAAA	-17	NA	35954706	35955368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35954700_35955400
transcript_60258.known	chr20	+	2561	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	115.770246609394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36232923	True	NA	17	True	ATTAAA	-7	NA	36236477	36256921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_60259.known	chr20	+	2417	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	52.6265670128269	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232923	True	NA	29	True	ATTAAA	-19	NA	36236477	36256933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
transcript_60260.known	chr20	+	2689	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	111.613420140929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232930	True	NA	29	True	ATTAAA	-19	NA	36236484	36256933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
transcript_60261.known	chr20	+	2863	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	110.203851515675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	36232929	True	NA	18	True	ATTAAA	-8	NA	36236483	36256922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
transcript_60263.known	chr20	+	1412	2	FSM	ENSG00000131043.13	ENST00000681771.1	1412	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTTCCTTTTTTTCTG	36232923	True	NA	NA	False	TTTAAA	-13	NA	36236477	36241206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236504_36239820
transcript_60267.known	chr20	+	3110	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	36.9628191565524	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	36461327	False	NA	27	True	AATAAA	-19	NA	36461337	36528637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_6027.known	chr1	+	2293	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	12.1227059685534	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	111346072	True	NA	NA	False	AATAAA	-18	NA	111346621	111353013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
transcript_60280.known	chr20	+	2786	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	28.4057897071863	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGCAGCATATTTAACA	36533048	True	NA	9	True	ATTAAA	-25	NA	36541518	36551447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
transcript_60281.nnic	chr20	+	1130	4	NNC	ENSG00000101335.10	novel	2786	4	NA	NA	-43	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	159.918729359634	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTCTGTGTGTCTGT	36532983	True	NA	30	True	AATAGA	-14	NA	36541453	36549821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_36541562_36544858_36545069_36548126_36548194_36549076
transcript_60283.known	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	156.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	36533026	True	NA	34	True	AATAGA	-18	NA	36541496	36549825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36541562_36544858_36545069_36549076
transcript_60289.known	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	541.632947668437	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	36572882	True	NA	3	True	ATTAAA	-8	NA	36574552	36612384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
transcript_60290.known	chr20	+	1170	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	579.342299508676	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594709	True	NA	36	True	AATAAA	-20	NA	36605788	36612557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
transcript_60293.known	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	82.0609529557146	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594699	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
transcript_60299.known	chr20	+	3432	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	181	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36573463	False	NA	38	True	AATAAA	-28	NA	36573487	36593950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36573653_36578740_36578967_36590909
transcript_6030.known	chr1	+	746	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	21.2720473861826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTTGGGTGATTTCA	111346070	True	NA	71	True	NA	NA	NA	111346619	111351563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
transcript_60300.known	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	91	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36569663	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36573746_36578740_36578967_36590909
transcript_60303.known	chr20	+	3344	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	118.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	36572883	True	NA	33	True	AATAAA	-23	NA	36574553	36593945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36574636_36578740_36578967_36590909
transcript_60306.known	chr20	+	896	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	596.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594742	True	NA	36	True	AATAAA	-20	NA	36605821	36612557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36606066_36607714_36607819_36612009
transcript_60307.known	chr20	-	2971	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_13	17.20258378526	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGCTGGTGTTATTT	-36744378	True	NA	-6	True	AATAAA	-22	NA	36746090	36651770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_60309.known	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_13	39.2311959375938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	-36744355	True	NA	-1	True	AATAAA	-27	NA	36746067	36651765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
transcript_60314.known	chr20	-	1922	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	75.9447167352674	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36769999	True	NA	-3	True	ATTAAA	-19	NA	36773720	36751794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
transcript_60316.known	chr20	-	2441	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	71.4401147815427	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAGTGTATAAACAA	-36770030	True	NA	1	True	ATTAAA	-23	NA	36773751	36751790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
transcript_60317.known	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	30.4934419178944	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770042	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_60320.nnic	chr20	-	2439	11	NNC	ENSG00000149636.16	novel	2181	11	NA	NA	-480	-241	intron_retention	FALSE	canonical	3	18	junction_6	74.905340263562	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAGCATTATTTGCAT	-36774263	True	NA	NA	False	ATTAAA	-25	NA	36774298	36752035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762513_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_60326.known	chr20	-	2129	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	73.7278947830182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770039	True	NA	-3	True	ATTAAA	-19	NA	36773760	36751794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
transcript_60327.known	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_6	27.4702982137183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770077	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
transcript_60328.known	chr20	-	1915	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	73.4193098696004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770097	True	NA	-3	True	ATTAAA	-19	NA	36773818	36751794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
transcript_60341.known	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	22.338208423138	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	-36947714	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_60343.known	chr20	+	1394	1	FSM	ENSG00000269846.1	ENST00000598590.1	1394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTCCATTATTTG	37095661	True	NA	3	True	AATAAA	-16	NA	37095784	37097178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37095800_37097200
transcript_60347.known	chr20	+	2227	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	274.732988269975	962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37162779	True	NA	NA	False	AATAAA	-18	NA	37179329	37241619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
transcript_60361.nnic	chr20	+	1512	5	NNC	ENSG00000101363.13	novel	1539	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	185.189598789997	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283775	True	NA	9	True	AATAAA	-21	NA	37289638	37317260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_37289687_37297346_37297535_37298762_37298880_37301207_37301414_37316307
transcript_60363.known	chr20	+	1539	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	189.592160966639	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283799	True	NA	9	True	AATAAA	-21	NA	37289662	37317260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
transcript_60365.nnic	chr20	+	1344	4	NIC	ENSG00000101363.13	novel	1539	5	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	170.267110414457	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283755	True	NA	9	True	AATAAA	-21	NA	37289618	37317260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_37289687_37298762_37298880_37301207_37301414_37316307
transcript_60370.known	chr20	+	1191	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	186.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283791	True	NA	9	True	AATAAA	-21	NA	37289654	37317260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37289687_37301207_37301414_37316307
transcript_60377.known	chr20	+	895	3	FSM	ENSG00000053438.11	ENST00000649309.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	203	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCACTGCCTCCC	37515010	True	NA	-88	True	NA	NA	NA	37521260	37523342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37521404_37522357_37522434_37522666
transcript_60381.known	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-37518958	True	NA	NA	False	NA	NA	NA	37527878	37518939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37519351_37521318_37521410_37527792
transcript_60382.known	chr20	+	1222	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	37514955	True	NA	17	True	NA	NA	NA	37521205	37523690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37521404_37522666
transcript_60383.known	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-37518956	True	NA	-12	True	AATAAA	-16	NA	37527876	37517416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37519351_37527792
transcript_60384.known	chr20	-	572	2	FSM	ENSG00000166619.15	ENST00000456058.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCGTCCTCCTCATCCC	-37512773	False	NA	NA	False	NA	NA	NA	37521693	37519153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37519351_37521318
transcript_60388.known	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_8	31.0046591480843	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	37683719	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_60394.known	chr20	+	1990	17	FSM	ENSG00000132792.19	ENST00000621317.4	1990	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	163.642414562209	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTTTGTAGTTAAGC	37693926	True	NA	24	True	ATTAAA	-24	NA	37693954	37872128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746631_37757045_37757050_37757570_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_60396.nic	chr20	-	2643	9	NIC	ENSG00000101407.13	novel	3958	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_7	136.699430777893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38027968	True	NA	-14	True	AATAAA	-23	NA	38033461	37983020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38012539_38013699_38013858_38033403
transcript_60397.known	chr20	-	3799	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	35.8437652905506	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38027963	True	NA	-14	True	AATAAA	-23	NA	38033456	37983020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
transcript_60399.nnic	chr20	-	1788	7	NIC	ENSG00000101407.13	novel	3799	8	NA	NA	-327	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_6	147.819052297808	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38033769	True	NA	-14	True	AATAAA	-23	NA	38033788	37983020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38033403
transcript_60403.nic	chr20	-	2959	3	ISM	ENSG00000101407.13	ENST00000373447.8	3799	8	-5	22819	0	0	5prime_fragment	FALSE	canonical	3	346	junction_2	46	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGTGCATGTGACCT	-38027968	True	NA	NA	False	AATAAA	-16	NA	38033461	38005839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_38006398_38011514_38013858_38033403
transcript_60404.nic	chr20	-	2732	2	ISM	ENSG00000101407.13	ENST00000373447.8	3799	8	-5	28163	0	624	5prime_fragment	FALSE	canonical	3	346	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGACAGTTTTGTTC	-38027968	True	NA	NA	False	AATAAA	-13	NA	38033461	38011183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_38013858_38033403
transcript_60406.known	chr20	+	542	4	FSM	ENSG00000101413.12	ENST00000495457.1	542	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	73.4952757363054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGCCGCATCAGGGG	38033814	False	NA	NA	False	NA	NA	NA	38033831	38059425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38034099_38040434_38040565_38057531_38057645_38059393
transcript_60407.known	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	18.5262576421203	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	38033157	True	NA	8	True	AATAAA	-19	NA	38033745	38092364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_60408.nnic	chr20	+	1515	13	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	7037	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.59861050777091	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	38353492	True	NA	5	True	AATAAA	-18	NA	38353518	38377013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_38353612_38354283_38354440_38355345_38355410_38360703_38360768_38363974_38364067_38364575_38364753_38366768_38366829_38368994_38369163_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_60409.nnic	chr20	+	685	6	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23155	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.35646599662505	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	38369608	True	NA	5	True	AATAAA	-18	NA	38369636	38377013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_38369681_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_60413.known	chr20	-	1240	9	FSM	ENSG00000196756.14	ENST00000670958.1	1240	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	83.9507854340863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	NA	False	NA	-24	True	AATAAA	-13	NA	38435409	38420593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_60416.known	chr20	-	1230	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	82.1596256176515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431100	True	NA	-24	True	AATAAA	-13	NA	38435334	38420593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_60417.known	chr20	-	1111	8	FSM	ENSG00000196756.14	ENST00000651115.2	1111	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	81.749992198714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-38431144	True	NA	-17	True	AATAAA	-20	NA	38435378	38420586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_60418.known	chr20	-	1301	8	FSM	ENSG00000196756.14	ENST00000665735.1	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	78.7688429027931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60419.known	chr20	-	1125	8	FSM	ENSG00000196756.14	ENST00000658488.2	1129	8	1	3	0	0	multi-exon	FALSE	canonical	3	16	junction_4	79.2389823668288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGCTTCTTAAATCAG	-38431140	True	NA	-21	True	AATAAA	-16	NA	38435374	38420590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60421.known	chr20	-	1200	8	FSM	ENSG00000196756.14	ENST00000657843.1	1200	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	85.1342277506167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431079	True	NA	-24	True	AATAAA	-13	NA	38435313	38420593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_60422.known	chr20	-	1077	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	80.7331204320375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTCTTAAATCAGT	-38431118	True	NA	-20	True	AATAAA	-17	NA	38435352	38420589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_60425.known	chr20	-	1192	7	FSM	ENSG00000196756.14	ENST00000660885.2	1202	7	10	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	71.0656973042081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60426.known	chr20	-	1022	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	4	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	73.1355286817259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60427.known	chr20	-	1154	7	FSM	ENSG00000196756.14	ENST00000664073.2	1166	7	10	2	0	0	multi-exon	FALSE	canonical	2	6	junction_2	76.7485070430255	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60428.known	chr20	-	960	7	FSM	ENSG00000196756.14	ENST00000436764.7	1010	7	49	1	0	0	multi-exon	FALSE	canonical	2	6	junction_2	78.3717990663025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431094	True	NA	-22	True	AATAAA	-15	NA	38435328	38420591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60430.known	chr20	-	1724	7	FSM	ENSG00000196756.14	ENST00000662982.2	1728	7	4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	86.3566570810972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGATGGCACCACTGC	-38431143	True	NA	NA	False	NA	NA	NA	38435377	38419808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60433.nic	chr20	-	1124	7	NIC	ENSG00000196756.14	novel	1173	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	82.0947961539314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431147	True	NA	-22	True	AATAAA	-15	NA	38435381	38420591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_38420901_38421005_38421099_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_60434.nic	chr20	-	954	7	FSM	ENSG00000196756.14	ENST00000689414.1	925	7	-29	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	83.3581629676022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431147	True	NA	-22	True	AATAAA	-15	NA	38435381	38420591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_60438.known	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	114	junction_5	43.9344966967871	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60439.known	chr20	-	868	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	6	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	52.8454349967904	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-38431143	True	NA	-17	True	AATAAA	-20	NA	38435377	38420586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60441.known	chr20	-	1979	6	FSM	ENSG00000196756.14	ENST00000658051.1	1979	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	67.1595116122802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431112	True	NA	-18	True	AATAAA	-19	NA	38435346	38420587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60443.known	chr20	-	893	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	83.2150827674887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431122	True	NA	-18	True	AATAAA	-19	NA	38435356	38420587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
transcript_60449.known	chr20	-	1364	9	FSM	ENSG00000196756.14	ENST00000661252.1	1364	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	83.0237164911328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_60450.known	chr20	-	1044	6	FSM	ENSG00000196756.14	ENST00000665181.1	1044	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	84.8396133890295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431122	True	NA	-22	True	AATAAA	-15	NA	38435356	38420591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38435026
transcript_60451.known	chr20	-	1279	8	FSM	ENSG00000196756.14	ENST00000668054.2	1291	8	6	6	0	0	multi-exon	FALSE	canonical	3	16	junction_4	80.1559704066811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431122	True	NA	-24	True	AATAAA	-13	NA	38435356	38420593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60452.known	chr20	+	1299	6	FSM	ENSG00000174365.21	ENST00000666350.1	1299	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	24.738633753706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445748	True	NA	14	True	AATAAA	-14	NA	38446679	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_60453.known	chr20	+	1234	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.0489242485845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	38445740	True	NA	15	True	AATAAA	-15	NA	38446671	38450922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_60454.known	chr20	+	1229	6	FSM	ENSG00000174365.21	ENST00000656824.1	1229	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	24.8145118831703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTTCTTTCATTT	38445756	True	NA	16	True	AATAAA	-16	NA	38446687	38450923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446949_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_60455.nic	chr20	+	932	5	NIC	ENSG00000174365.21	novel	1073	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.3240180765371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445717	True	NA	14	True	AATAAA	-14	NA	38446648	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_38446853_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_60456.known	chr20	+	1116	5	FSM	ENSG00000174365.21	ENST00000434729.7	1143	5	27	0	2	0	multi-exon	FALSE	canonical	2	4	junction_2	26.3569250862084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445763	True	NA	14	True	AATAAA	-14	NA	38446694	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261_38450448_38450532
transcript_60457.known	chr20	+	1046	5	FSM	ENSG00000174365.21	ENST00000421599.6	1093	5	42	5	-2	0	multi-exon	FALSE	canonical	2	4	junction_2	29.7268817739096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445759	True	NA	14	True	AATAAA	-14	NA	38446690	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450335_38450448_38450532
transcript_60458.known	chr20	+	1490	5	FSM	ENSG00000174365.21	ENST00000418383.2	1490	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.9868923901704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTTTGGTTTTT	38445955	False	NA	33	True	AATAAA	-33	NA	38446886	38450940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_60459.known	chr20	+	1068	5	FSM	ENSG00000174365.21	ENST00000667760.2	1076	5	7	1	2	0	multi-exon	FALSE	canonical	3	15	junction_1	23.4773827331754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445750	True	NA	13	True	AATAAA	-13	NA	38446681	38450920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_60460.known	chr20	+	967	5	FSM	ENSG00000174365.21	ENST00000359074.9	967	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.4863602537695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445769	True	NA	13	True	AATAAA	-13	NA	38446700	38450920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_60464.known	chr20	+	1169	4	FSM	ENSG00000174365.21	ENST00000437028.5	1169	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.48331477354788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445795	True	NA	14	True	AATAAA	-14	NA	38446726	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261
transcript_60465.known	chr20	+	1152	4	FSM	ENSG00000174365.21	ENST00000670898.2	1154	4	2	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	20.5318181259127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445742	True	NA	14	True	AATAAA	-14	NA	38446673	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335
transcript_60466.known	chr20	+	901	4	FSM	ENSG00000174365.21	ENST00000442419.2	901	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	26.9814751264641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38446610	False	NA	14	True	AATAAA	-14	NA	38447541	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38447929_38448094_38448661_38448731_38450335
transcript_60467.nic	chr20	+	1596	4	FSM	ENSG00000174365.21	ENST00000693500.1	1600	4	4	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	20.9814733091416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445740	True	NA	14	True	AATAAA	-14	NA	38446671	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38448661_38448731_38450261_38450448_38450532
transcript_60468.known	chr20	+	880	4	FSM	ENSG00000174365.21	ENST00000457218.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	8.17856276425687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38446382	False	NA	14	True	AATAAA	-14	NA	38447313	38450921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38448661_38448731_38450335_38450448_38450532
transcript_60471.known	chr20	+	1581	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	25	1	0	0	multi-exon	FALSE	canonical	3	53	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445765	True	NA	13	True	AATAAA	-13	NA	38446696	38450920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38448661_38448731_38450335
transcript_60475.known	chr20	-	187	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAACTTGTCGACTTCTG	-38961945	True	NA	-4	True	ATTAAA	-26	NA	38962111	38961924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38961900_38962100
transcript_60476.known	chr20	+	3318	22	FSM	ENSG00000101452.15	ENST00000484417.5	3318	22	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	21.2000513412291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960133	True	NA	18	True	AGTAAA	-34	NA	38962359	39039721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_60477.known	chr20	+	3314	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_17	11.2980643697671	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960117	True	NA	18	True	AGTAAA	-34	NA	38962343	39039721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_60480.nnic	chr20	-	1367	8	Antisense	novelGene_ENSG00000229976.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	10.8100482356529	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTAAAATGTTCATGG	NA	False	NA	NA	False	AATAAA	-18	NA	39789033	39704458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr20_-_39705236_39706256_39706339_39706991_39707097_39708531_39708588_39785718_39785842_39787278_39787391_39788204_39788278_39788994
transcript_60485.nnic	chr20	-	572	5	Antisense	novelGene_ENSG00000229976.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	9.83298021964857	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTTCTGTTTATTTCT	NA	False	NA	-5	True	TATAAA	-15	NA	39789033	39782911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr20_-_39783137_39785718_39785842_39787278_39787391_39788204_39788278_39788994
transcript_60489.known	chr20	+	3734	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	40.572897357719	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	41019765	True	NA	5	True	AATAAA	-21	NA	41028821	41124487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
transcript_6049.known	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	63.5889578115222	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-111445394	True	NA	-6	True	AGTAAA	-16	NA	111449256	111439889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_60491.nic	chr20	-	1792	8	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-64	94726	-57	0	5prime_fragment	FALSE	canonical	3	40	junction_7	10.6022716087311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTGTGTCTGTTTTCT	-41613587	True	NA	-3	True	AATAAA	-29	NA	41618441	41496808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_60495.nic	chr20	-	712	4	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-64	112837	-57	0	5prime_fragment	FALSE	canonical	3	40	junction_3	8.04155872120988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	-41613587	True	NA	NA	False	NA	NA	NA	41618441	41514919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_41514953_41533049_41533571_41551304_41551361_41618339
transcript_60496.known	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	-41613530	True	NA	NA	False	NA	NA	NA	41618384	41514919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_41514953_41533049_41533571_41618339
transcript_60497.known	chr20	-	10719	37	FSM	ENSG00000124177.16	ENST00000373233.8	10719	37	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_27	15.3702002444846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATTTGAGGAATTC	-41613523	True	NA	NA	False	AAAAAG	-12	NA	41618377	41402082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_41405490_41412143_41412264_41413323_41413516_41415185_41415639_41416587_41416795_41417197_41417350_41420507_41422080_41423491_41423701_41425177_41425395_41426092_41426154_41437273_41437335_41439999_41440130_41445664_41445769_41447881_41447972_41450945_41451106_41451825_41452026_41452739_41452943_41454625_41454737_41455799_41455980_41457263_41457429_41473321_41473518_41483308_41483520_41484351_41484608_41487664_41487809_41488427_41488605_41489777_41490022_41491697_41491820_41493537_41493673_41493857_41493945_41497383_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_60503.known	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	18.3121089264272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	43442581	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
transcript_60504.known	chr20	+	4353	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	4.28952211790544	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	43442584	True	NA	104	True	AATAAA	-18	NA	43457895	43464243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_60509.known	chr20	+	1077	6	FSM	ENSG00000124193.16	ENST00000670741.1	1077	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	21.5369450015549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	43442581	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43463343
transcript_60510.known	chr20	-	588	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTCCACAATTTCTG	-43590553	True	NA	NA	False	ATTAAA	-16	NA	43590596	43590008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_43590000_43590600
transcript_60514.known	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	55.9486239393791	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	43588389	True	NA	39	True	ATTAAA	-32	NA	43590989	43647222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_60516.known	chr20	+	1754	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	27.9847803099128	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTGTAAATACTGTAC	43588336	True	NA	116	True	NA	NA	NA	43590936	43647299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_60526.known	chr20	-	1923	2	FSM	ENSG00000149596.7	ENST00000342272.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTCTTTTTCTTT	-44187011	True	NA	NA	False	ATTAAA	-20	NA	44187093	44176816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44177973_44186326
transcript_60530.known	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	30.4667396060396	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	-44205565	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
transcript_60537.known	chr20	+	1627	3	FSM	ENSG00000223891.7	ENST00000655968.1	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	44210342	True	NA	-43	True	NA	NA	NA	44210994	44225969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211357_44214887_44215004_44224820
transcript_60538.known	chr20	+	1366	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	0	12	0	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTATGATTTTGTTT	44210893	False	NA	3	True	AATAAA	-20	NA	44210906	44226015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211078_44224820
transcript_60539.known	chr20	+	1482	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210429	True	NA	15	True	AATAAA	-32	NA	44211081	44226027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211357_44224820
transcript_60540.known	chr20	+	1441	3	FSM	ENSG00000223891.7	ENST00000439943.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210944	False	NA	15	True	AATAAA	-32	NA	44210959	44226027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211078_44214887_44215004_44224820
transcript_60541.nnic	chr20	+	1222	7	NNC	ENSG00000124194.17	novel	2855	6	NA	NA	0	63880	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	12.3107902084129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATATTGGCTAGTCT	44246482	True	NA	NA	False	AATAAA	-40	NA	44247257	44344827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956_44279323_44344808
transcript_60542.known	chr20	+	2645	6	FSM	ENSG00000124194.17	ENST00000617075.4	2645	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9522198869537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	44247087	True	NA	NA	False	ATTAAA	-40	NA	44247098	44280917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44247203_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_60544.known	chr20	+	2778	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6.30555310817378	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATCTTTTTTCATC	44246532	True	NA	NA	False	AATAAA	-16	NA	44247307	44280947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_60545.known	chr20	+	880	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5922772190682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCTCCCTGGGTGGG	44246544	True	NA	-78	True	NA	NA	NA	44247319	44279235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
transcript_60547.known	chr20	-	4628	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-44310559	True	NA	NA	False	ATTAAA	-25	NA	44311202	44302839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44307241_44310975
transcript_60548.known	chr20	-	1726	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	114.657926023455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCTGTAAGGTGGTGA	-44517677	True	NA	-7	True	ATTAAA	-13	NA	44522085	44496223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_60554.known	chr20	-	4396	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_7	34.5728788303387	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTGATATTAATTTG	-44517662	True	NA	-11	True	AATAAA	-41	NA	44522070	44497440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_60563.known	chr20	-	1496	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_3	22.6208417027051	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	-44649818	True	NA	-5	True	AATAAA	-25	NA	44651699	44619521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_60565.known	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	77.1748663750058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	-44649810	True	NA	NA	False	NA	NA	NA	44651691	44619809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_60567.known	chr20	+	1443	6	FSM	ENSG00000168734.14	ENST00000372891.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	183.597821337836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44531979_44582584_44582732_44585099_44585205_44589796_44589867_44614533_44614708_44618284
transcript_60568.known	chr20	+	1338	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	159.058754867502	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
transcript_60569.known	chr20	+	1191	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	67.2755527662166	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
transcript_60572.known	chr20	-	452	3	FSM	ENSG00000244558.6	ENST00000445420.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTATAATAGTCTGGT	-44745982	False	NA	NA	False	NA	NA	NA	44745995	44695201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44695508_44738819_44738935_44745964
transcript_60578.known	chr20	+	1097	7	FSM	ENSG00000166913.13	ENST00000479421.5	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1129.9498022282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATCGTACGT	44857665	True	NA	34	True	GATAAA	-14	NA	44885701	44906520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44885887_44901530_44901834_44903035_44903122_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_60580.known	chr20	+	3109	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	1027.44034701128	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857674	True	NA	30	True	AATAAA	-27	NA	44885710	44908532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_60584.known	chr20	+	3020	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	206.28233079932	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857668	True	NA	30	True	AATAAA	-27	NA	44885704	44908532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_60590.known	chr20	+	2141	15	FSM	ENSG00000101104.13	ENST00000217073.7	2141	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	27.2235642225553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	44907059	True	NA	14	True	ATTAAA	-17	NA	44910059	44939316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933056_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_60598.known	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_3	27.3231688417642	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	-44957400	True	NA	-3	True	AATAAA	-24	NA	44960397	44942129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_60600.nnic	chr20	-	1805	6	NIC	ENSG00000025772.8	novel	1973	7	NA	NA	-67	-87	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	165.73545185023	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTGCTTTCATTT	-44960449	False	NA	-1	True	ATTAAA	-20	NA	44960464	44942216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_44943214_44943452_44943580_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_60602.known	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.0523711806916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907123	True	NA	11	True	ATTAAA	-14	NA	44910123	44939313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_60603.known	chr20	+	6366	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	15.1937487145207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	44961882	True	NA	58	True	AATATA	-43	NA	44966511	45080021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_60604.nic	chr20	+	1301	10	ISM	ENSG00000101109.12	ENST00000372801.5	2038	12	-48	50577	-5	29774	5prime_fragment	FALSE	canonical	3	106	junction_8	15.734682930189	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAAACCAGATCAA	44961844	True	NA	NA	False	NA	NA	NA	44966473	45025031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_60605.known	chr20	+	6161	10	FSM	ENSG00000101109.12	ENST00000499879.6	6161	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	42.1341186049653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACCCTTATTAACGAGA	44961849	True	NA	15	True	AATAAA	-15	NA	44966478	45079948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_60610.known	chr20	+	932	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCCTACCTCTCTCTG	44961885	True	NA	NA	False	AATAAA	-13	NA	44966514	44972920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44966604_44972077
transcript_60611.known	chr20	+	1850	4	FSM	ENSG00000101109.12	ENST00000487587.2	1850	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	71.1820826394458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTCATTTGCCTGTG	44961923	True	NA	NA	False	AATAAA	-19	NA	44966552	44975684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44966604_44972077_44972159_44973300_44973434_44974099
transcript_60612.known	chr20	+	1622	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	45206649	True	NA	6	True	AATAAA	-20	NA	45207032	45209768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45207130_45207373_45208731_45209600
transcript_60616.known	chr20	-	2613	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	5.1720402163943	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	-45345608	True	NA	-4	True	AATAAA	-18	NA	45348424	45325287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
transcript_60619.known	chr20	+	1313	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	164.440141084834	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45361078	True	NA	NA	False	AATAAA	-22	NA	45363199	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_60620.known	chr20	+	2728	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_3	10.1434160364686	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	45361034	True	NA	17	True	AATAAA	-22	NA	45363155	45369209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
transcript_60626.nnic	chr20	+	1032	4	NNC	ENSG00000244274.9	novel	1132	3	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	183.561675980824	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	45405940	False	NA	NA	False	AATAAA	-19	NA	45405950	45410607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45406022_45408459_45408607_45408800_45408939_45409931
transcript_60627.known	chr20	+	1118	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	171.821612920688	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405552	False	NA	NA	False	AATAAA	-22	NA	45406056	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
transcript_60628.known	chr20	+	1202	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	180.787782281387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405566	False	NA	NA	False	AATAAA	-22	NA	45406070	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
transcript_60629.nnic	chr20	+	1089	4	NNC	ENSG00000244274.9	novel	1118	4	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	185.440616430765	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	45405503	True	NA	NA	False	AATAAA	-19	NA	45406007	45410607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45406136_45408459_45408607_45408800_45408939_45409931
transcript_60631.known	chr20	+	1036	4	FSM	ENSG00000244274.9	ENST00000357275.6	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	182.622257375406	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405961	False	NA	NA	False	AATAAA	-22	NA	45406183	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406256_45408459_45408607_45408800_45408939_45409931
transcript_60633.known	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	33.5062183283442	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403258	True	NA	NA	False	AATAAA	-22	NA	45406618	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
transcript_60634.known	chr20	+	1207	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	165.582473576027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403227	True	NA	NA	False	AATAAA	-22	NA	45406587	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
transcript_60635.nnic	chr20	+	1303	4	NNC	ENSG00000244274.9	novel	1078	4	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	187.789480240212	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	45403365	False	NA	NA	False	AATAAA	-19	NA	45406725	45410607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45407068_45408459_45408607_45408800_45408939_45409931
transcript_60636.known	chr20	+	1537	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	180.743526086613	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45407192	False	NA	NA	False	AATAAA	-22	NA	45407206	45410610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
transcript_60639.known	chr20	+	2203	12	FSM	ENSG00000124155.19	ENST00000640585.1	2203	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	157.773139781027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	45408066	True	NA	-30	True	NA	NA	NA	45416140	45426196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60640.known	chr20	+	2187	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	155.893585234786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	45408066	True	NA	14	True	AATAAA	-16	NA	45416140	45426240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60641.known	chr20	+	2168	12	FSM	ENSG00000124155.19	ENST00000279036.12	2168	12	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_9	28.5124302311457	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	45408066	True	NA	15	True	AATAAA	-17	NA	45416140	45426241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60643.known	chr20	+	2037	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	164.178439510187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	45408032	True	NA	18	True	AATAAA	-20	NA	45416106	45426244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60644.known	chr20	+	2021	11	FSM	ENSG00000124155.19	ENST00000639499.1	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_9	26.5716013819265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCTCTCTTTCTTTCCT	45408066	True	NA	NA	False	NA	NA	NA	45416140	45425100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495
transcript_60646.known	chr20	+	1971	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	156.151336849865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	45408062	True	NA	15	True	AATAAA	-17	NA	45416136	45426241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
transcript_60648.known	chr20	+	2032	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	161.811742466361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45408022	True	NA	-37	True	NA	NA	NA	45416096	45426189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60650.known	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_1	165.121803153137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45416069	False	NA	-24	True	NA	NA	NA	45416083	45426202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60653.known	chr20	+	1158	7	FSM	ENSG00000124155.19	ENST00000545755.3	1158	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	204.674334818348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCCCTTTCCAGCAGC	45408079	True	NA	NA	False	NA	NA	NA	45416153	45425826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_60655.known	chr20	+	692	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	159.717524085493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	45464763	False	NA	16	True	AATAAA	-16	NA	45469755	45481531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
transcript_60661.known	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_1	58.2885542414251	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464760	True	NA	17	True	AATAAA	-17	NA	45469752	45481532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
transcript_60667.known	chr20	+	420	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464763	False	NA	17	True	AATAAA	-17	NA	45469755	45481532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45469861_45479941_45480095_45481370
transcript_60668.known	chr20	+	460	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	183.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45471254	False	NA	17	True	AATAAA	-17	NA	45471272	45481532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45471418_45479941_45480095_45481370
transcript_60669.known	chr20	+	493	2	FSM	ENSG00000180305.5	ENST00000372643.4	493	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCTCTTTTGCTGCCA	NA	False	NA	NA	False	AATAAA	-21	NA	45629738	45631196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45629905_45630869
transcript_60670.nnic	chr20	+	601	3	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAGCACCACCTGGAAG	45759457	True	NA	NA	False	AAAAAG	-3	NA	45759599	45765279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr20_+_45759900_45762148_45762328_45765157
transcript_60675.known	chr20	+	1264	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_6	33.3687312048604	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	45788207	True	NA	12	True	ATTAAA	-19	NA	45791953	45811418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_60679.known	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	108.144760650705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	45788308	True	NA	21	True	ATTAAA	-28	NA	45792054	45811427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_60683.known	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	1693.06933112617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746809	True	NA	38	True	AATAAA	-26	NA	45812634	45816957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
transcript_60685.known	chr20	+	777	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	3264	junction_1	158.182679203508	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	45746818	True	NA	33	True	AATAAA	-21	NA	45812643	45816952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_60687.known	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1403.71370300357	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45812878	True	NA	38	True	AATAAA	-26	NA	45813005	45816957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_60689.known	chr20	+	641	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	1493.19238546143	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	45812543	False	NA	34	True	AATAAA	-22	NA	45812575	45816953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
transcript_60690.known	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	1467.7753574713	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746848	True	NA	38	True	AATAAA	-26	NA	45812673	45816957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
transcript_60693.known	chr20	+	476	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1651.48424825132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746832	True	NA	38	True	AATAAA	-26	NA	45812657	45816957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
transcript_60695.nnic	chr20	-	808	6	NNC	ENSG00000101470.10	novel	681	6	NA	NA	1935	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.7158770156601	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45825355	False	NA	-1	True	AATAAA	-17	NA	45825377	45823213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45825183
transcript_60696.known	chr20	-	681	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	67.4091981854109	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45827242	True	NA	-1	True	AATAAA	-17	NA	45827312	45823213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
transcript_60697.nic	chr20	-	711	5	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2381	0	2381	0	3prime_fragment	FALSE	canonical	2	3	junction_4	69.7652313118791	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45824909	False	NA	-1	True	AATAAA	-17	NA	45824931	45823213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782
transcript_60699.nic	chr20	-	551	2	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2937	0	2937	0	intron_retention	FALSE	canonical	3	180	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45824260	True	NA	-1	True	AATAAA	-17	NA	45824375	45823213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_45823380_45823990
transcript_6070.known	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2551	junction_3	79.2178781729366	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	111427426	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_60702.known	chr20	-	1154	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	29.7684396635094	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGGCTTTTAATTCCC	-45850146	True	NA	-1	True	AATAAA	-19	NA	45857392	45841720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_60703.known	chr20	-	1197	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	145.099414195923	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGGCTGGCTTTTAA	-45850143	True	NA	-6	True	AATAAA	-14	NA	45857389	45841725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_60704.known	chr20	-	1013	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	139.811256699881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATACCACTGGAGTG	-45850156	True	NA	-18	True	AATAAA	-2	NA	45857402	45841737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
transcript_60707.nic	chr20	-	945	5	NIC	ENSG00000101473.17	novel	1154	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	156.020030765283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTGGCCCTCACATCC	-45850176	True	NA	-45	True	NA	NA	NA	45857422	45841764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_45841957_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_6071.known	chr1	+	1040	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	1033.70583823446	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTCAAGTTGTATAA	111427427	True	NA	15	True	AATAAA	-20	NA	111449464	111461332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_60711.known	chr20	-	814	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	203.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGTTGTGTGCATTAT	-45850063	False	NA	-3	True	ATTAAA	-16	NA	45857309	45853421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45853980_45855158_45855293_45857187
transcript_60712.known	chr20	-	708	3	FSM	ENSG00000101473.17	ENST00000457981.5	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGTGTGCATTATCT	-45849950	False	NA	-1	True	ATTAAA	-18	NA	45857196	45853419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45853985_45855158_45855293_45857187
transcript_60718.known	chr20	+	2776	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	45857015	True	NA	NA	False	AATAAA	-7	NA	45857613	45879122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45857981_45876713
transcript_60719.nnic	chr20	+	1054	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880296	True	NA	29	True	AATAAA	-21	NA	45881214	45885266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45883248_45884974
transcript_6072.known	chr1	+	859	6	FSM	ENSG00000116459.11	ENST00000468818.1	859	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1072.83985757428	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAATTGAATGAAACA	111427447	True	NA	-5	True	TTTAAA	-31	NA	111449484	111461312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111449582_111449836_111449874_111456226_111456250_111456629_111456756_111459456_111459637_111460916
transcript_60720.nnic	chr20	+	1057	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880296	True	NA	29	True	AATAAA	-21	NA	45881214	45885266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45883263_45884986
transcript_60722.nnic	chr20	+	2195	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880296	True	NA	29	True	AATAAA	-21	NA	45881214	45885266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45884399_45884984
transcript_60723.known	chr20	+	2769	2	FSM	ENSG00000168612.5	ENST00000372523.1	2769	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880308	True	NA	29	True	AATAAA	-21	NA	45881226	45885266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45881262_45882532
transcript_60730.known	chr20	-	1889	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_12	44.9287831524019	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTATGGGAGACCCT	-45898183	True	NA	-15	True	AATAAA	-18	NA	45912155	45898621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_60734.known	chr20	+	1858	15	FSM	ENSG00000064601.21	ENST00000646241.3	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	24.5985108226876	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888834	True	NA	21	True	ATTAAA	-18	NA	45891334	45898820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_60736.known	chr20	+	1898	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	74.957300770342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888840	True	NA	21	True	ATTAAA	-18	NA	45891340	45898820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_60739.known	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	124.006768248465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	-45898180	True	NA	-14	True	AATAAA	-19	NA	45912152	45898620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_6074.nic	chr1	+	1551	9	FSM	ENSG00000116473.15	ENST00000687939.1	5101	9	-5	3555	-5	0	multi-exon	FALSE	canonical	2	12	junction_2	82.479921799187	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTGTTTTTG	111617498	True	NA	25	True	ATTAAA	-40	NA	111619771	111713113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111619935_111627469_111627564_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_60743.known	chr20	+	2557	14	FSM	ENSG00000064601.21	ENST00000684198.1	2557	14	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	25.0334687211544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	45890854	False	NA	NA	False	NA	NA	NA	45890962	45898949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45898110_45898366
transcript_60746.known	chr20	-	1530	14	FSM	ENSG00000100979.15	ENST00000372420.5	1530	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	131.681164158291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGGCTGTCCTGAG	-45910917	False	NA	-18	True	NA	NA	NA	45910937	45898759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45910870
transcript_60747.known	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	127.896962966658	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	-45898183	True	NA	-64	True	NA	NA	NA	45912155	45898805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
transcript_60753.known	chr20	-	1199	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAAGGTCTCCTTGC	-45890926	True	NA	-24	True	AATAAA	-22	NA	45891208	45888633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45888874_45890249
transcript_60754.known	chr20	+	1996	14	FSM	ENSG00000064601.21	ENST00000372459.7	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_10	21.013379789494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888885	True	NA	21	True	ATTAAA	-18	NA	45891385	45898820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_60756.known	chr20	+	2689	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	57.4668382634716	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	45928708	True	NA	9	True	AATACA	-14	NA	45934682	45948020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_60757.nic	chr20	+	2775	16	ISM	ENSG00000100982.12	ENST00000372409.8	2689	17	2	-3	2	0	intron_retention	FALSE	canonical	3	273	junction_4	59.3511583711725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGGGTCTTGAGGGC	45928710	True	NA	12	True	AATACA	-17	NA	45934684	45948023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262
transcript_6076.known	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	169	junction_1	12.328828005938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	111617509	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_60760.known	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	45928758	True	NA	115	True	GATAAA	-21	NA	45934732	45937972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45934805_45937417
transcript_60762.known	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	17.7738493923579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46008521	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_60763.nic	chr20	+	1490	7	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	3059	0	3059	0	3prime_fragment	FALSE	canonical	3	38	junction_1	14.4385671803757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46011789	True	NA	21	True	AATAAA	-21	NA	46011966	46016561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_60764.nic	chr20	+	779	4	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	4677	0	4677	0	3prime_fragment	FALSE	canonical	3	47	junction_1	13.1402688962847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46013407	False	NA	21	True	AATAAA	-21	NA	46013584	46016561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_46013797_46014123_46014275_46014370_46014475_46016249
transcript_60766.nic	chr20	+	1106	3	NIC	ENSG00000100985.7	novel	2336	13	NA	NA	4677	0	intron_retention	FALSE	canonical	3	70	junction_1	4	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46013407	False	NA	21	True	AATAAA	-21	NA	46013584	46016561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_46014275_46014370_46014475_46016249
transcript_60767.nnic	chr20	+	622	3	NNC	ENSG00000124140.15	novel	617	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021177	True	NA	4	True	AATAAA	-15	NA	46021659	46023581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_46021887_46022889_46023072_46023368
transcript_60768.known	chr20	+	401	2	FSM	ENSG00000124140.15	ENST00000628272.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021216	True	NA	4	True	AATAAA	-15	NA	46021698	46023581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46021887_46023368
transcript_60769.known	chr20	-	491	2	FSM	ENSG00000204044.6	ENST00000419897.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACATCTACTGAAGGT	-46021548	False	NA	NA	False	NA	NA	NA	46021727	46020618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46020906_46021523
transcript_60771.known	chr20	-	3224	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_1	16.8644052152842	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-46087930	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_60775.known	chr20	+	1682	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	13.114877048604	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	46116507	True	NA	NA	False	ATTAAA	-22	NA	46118313	46129858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_60778.nnic	chr20	+	1443	9	NNC	ENSG00000101017.14	novel	1682	9	NA	NA	-27	-143	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	48.1506425190776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	46116444	True	NA	5	True	AATAAA	-21	NA	46118250	46129516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_6078.known	chr1	+	3600	11	FSM	ENSG00000064703.13	ENST00000369702.5	3600	11	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	11.5948264325086	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTTGCTTTTTTCCTC	111751654	True	NA	NA	False	AATATA	-14	NA	111755900	111768000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_60781.known	chr20	+	1623	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	50.7253509055363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	46116509	True	NA	NA	False	ATTAAA	-27	NA	46118315	46129863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
transcript_60785.known	chr20	+	822	8	FSM	ENSG00000101017.14	ENST00000466205.5	822	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	50.4688224631438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGGCACTGACTG	46116541	True	NA	NA	False	NA	NA	NA	46118347	46129126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_60795.nnic	chr20	+	1247	7	NIC	ENSG00000101017.14	novel	1623	8	NA	NA	-27	-143	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	53.3510387277824	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	46116444	True	NA	5	True	AATAAA	-21	NA	46118250	46129516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46128137_46128225_46128329_46128359_46128881
transcript_60796.nnic	chr20	+	1390	7	NIC	ENSG00000101017.14	novel	1522	7	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	53.3510387277824	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	46116444	True	NA	19	True	TATAAA	-22	NA	46118250	46129659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46128137_46128225_46128329_46128359_46128881
transcript_60803.known	chr20	+	1522	7	FSM	ENSG00000101017.14	ENST00000620709.4	1522	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	56.9814784722974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	46116471	True	NA	19	True	TATAAA	-22	NA	46118277	46129659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46127978_46128225_46128329_46128359_46128881
transcript_6081.known	chr1	+	2393	3	FSM	ENSG00000227811.3	ENST00000658759.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAATGTGTATCCATA	111739531	True	NA	NA	False	AATAGA	-26	NA	111739578	111747798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111740078_111744374_111744530_111746059
transcript_60810.known	chr20	-	2175	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	81.5082817878036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTTTAACAACTAAGA	-46360440	True	NA	NA	False	ATTAAA	-22	NA	46364458	46349529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
transcript_60815.known	chr20	-	5740	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	74.0056721216208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGGGCTTTTTATT	-46360386	True	NA	2	True	ATTAAA	-24	NA	46364404	46345979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_60817.nic	chr20	-	2041	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-12	-207	intron_retention	FALSE	canonical	3	23	junction_8	78.6936551319399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCATTCTGGAGACCT	-46364456	False	NA	-21	True	AATAAA	-15	NA	46364470	46349736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
transcript_60818.known	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	37.5029216968821	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-46360407	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_60819.known	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	82.1786671425944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	-46360383	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
transcript_60824.nic	chr20	-	1830	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-12	407	intron_retention	FALSE	canonical	3	23	junction_8	78.6936551319399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCCGCCTTGTGTTGC	-46364456	False	NA	-8	True	AATAAA	-13	NA	46364470	46349947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
transcript_6083.known	chr1	+	779	2	FSM	ENSG00000227811.3	ENST00000524935.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTCACAGAAAGACTGGAA	111739822	False	NA	NA	False	NA	NA	NA	111739852	111746613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111740078_111746059
transcript_6085.known	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-111738185	True	NA	-8	True	AATAAA	-18	NA	111739395	111722063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111727805_111739185
transcript_60851.nic	chr20	-	1273	4	ISM	ENSG00000080189.15	ENST00000372230.10	5820	10	-45	10009	-12	-889	5prime_fragment	FALSE	canonical	3	183	junction_3	51.1359842859105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGCCCAGCTCTGTT	-46364456	False	NA	-1	True	ATTAAA	-17	NA	46364470	46355992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_46356638_46357622_46357774_46358386_46358764_46364370
transcript_60853.known	chr20	-	3666	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_20	40.5875219590395	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404467	True	NA	-5	True	AATAAA	-19	NA	46406615	46366049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_60856.nnic	chr20	-	1172	3	NIC	ENSG00000215452.5	novel	2722	4	NA	NA	-55	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGCGGTATTTTGT	-46458841	True	NA	0	True	AATAAA	-21	NA	46459331	46414223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46414965_46457596_46457915_46459218
transcript_60857.nnic	chr20	-	1094	3	NNC	ENSG00000215452.5	novel	2722	4	NA	NA	-55	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGCGGTATTTTGT	-46458841	True	NA	0	True	AATAAA	-21	NA	46459331	46414223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_46414965_46457674_46457915_46459218
transcript_60858.known	chr20	-	3876	5	FSM	ENSG00000283757.1	ENST00000472805.2	3876	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.38748219369606	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAGAAATAATATACATC	NA	False	NA	NA	False	AATAAA	-30	NA	46481357	46455032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46457915_46459218_46459623_46474500_46474689_46476231_46476326_46481049
transcript_60859.known	chr20	-	3574	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_20	43.5171230666734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGTGGTTCCTGTTA	-46404484	True	NA	-10	True	AATAAA	-14	NA	46406632	46366054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_6086.known	chr1	+	5864	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	18.1482781552411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	112390375	True	NA	9	True	AATAAA	-16	NA	112396213	112461164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_60862.known	chr20	-	2495	6	FSM	ENSG00000198185.12	ENST00000625284.2	2495	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	37.711536696348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-46511340	True	NA	-23	True	AATAAA	-21	NA	46513555	46501087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46509604_46509752_46512081_46512141_46513496
transcript_60865.known	chr20	-	3890	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	33.380383460949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGCCAAATTTGT	-46511339	True	NA	NA	False	AGTAAA	-18	NA	46513554	46499631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
transcript_60873.nnic	chr20	-	2295	6	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	3283	12	NA	NA	-21	-6592	multi-exon	FALSE	canonical	2	7	junction_2	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTGGGTGTATTTCA	-46684476	False	6763	NA	False	NA	NA	NA	46684488	46594734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_60879.nnic	chr20	-	969	5	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	876	4	NA	NA	-21	0	multi-exon	FALSE	canonical	1	2	junction_1	3.34477204006491	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	-46684476	False	6763	-4	True	ATTAAA	-28	NA	46684488	46608708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_60883.known	chr20	-	700	1	FSM	ENSG00000273893.1	ENST00000610430.1	700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTTAAGTATTCTGT	-46682363	False	NA	NA	False	AATAAA	-21	NA	46682375	46681675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46681700_46682400
transcript_60889.nnic	chr20	-	808	6	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12314	0	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_3	90.9799978017146	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-47361341	True	NA	NA	False	AATACA	-36	NA	47369203	47291795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_6089.known	chr1	+	1014	6	FSM	ENSG00000143079.15	ENST00000441739.1	1014	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	74.766302570075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGTGAAGGACCTAGAG	112396508	False	NA	54	True	AAGAAA	-16	NA	112396518	112456306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112396586_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_60891.nnic	chr20	-	335	3	NNC	ENSG00000101040.20	novel	341	3	NA	NA	-12314	0	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_2	26.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGAAACCTGGC	-47361341	True	NA	NA	False	NA	NA	NA	47369203	47310102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47310205_47347855_47347927_47369041
transcript_60893.nic	chr20	+	920	2	ISM	ENSG00000124151.19	ENST00000371997.3	6750	23	-53	71772	1	-40103	5prime_fragment	FALSE	canonical	3	62	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAATAGAAAAAAGGAGAAA	47498800	True	NA	NA	False	AAAAAG	-9	NA	47501887	47583970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_47502020_47583182
transcript_60897.known	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_8	140.692014896211	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	49031771	True	NA	32	True	AATAAA	-22	NA	49046311	49096949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_6090.known	chr1	-	1780	15	FSM	ENSG00000007341.19	ENST00000490067.5	1780	15	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_14	29.0246200910291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCACCAAATTTTTCTG	-112619116	False	NA	NA	False	NA	NA	NA	112619189	112525985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616845_112618908
transcript_60911.known	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	286.575660982324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	-49170871	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
transcript_60913.known	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_8	86.7715711253147	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_60914.known	chr20	-	3411	13	FSM	ENSG00000124214.21	ENST00000371828.7	3411	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_8	207.807536490432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGGTCCTGTTGAG	-49170904	True	NA	NA	False	AATAAA	-13	NA	49188367	49113340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_60918.known	chr20	-	3136	12	FSM	ENSG00000124214.21	ENST00000347458.9	3136	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	224.1745925253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_60919.known	chr20	-	1085	7	FSM	ENSG00000124214.21	ENST00000437404.2	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	345.498191022761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACTTTTCTGAACAC	-49170904	True	NA	NA	False	AGTAAA	-38	NA	49188367	49124374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_60923.known	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	279.188553706469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_60929.known	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_12	75.864270246276	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	49206688	True	NA	21	True	ATTAAA	-27	NA	49219415	49244073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_60940.known	chr20	+	1075	6	FSM	ENSG00000177410.13	ENST00000450535.5	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	496.47582015643	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278177	49289260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49281751_49281819_49289044
transcript_60943.known	chr20	+	596	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	326.858818911162	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49278206	False	NA	16	True	AATAAA	-17	NA	49278270	49289260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_60945.known	chr20	+	2608	5	FSM	ENSG00000177410.13	ENST00000371743.8	2608	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	311.962637987308	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTCTGTGCTTCCTGC	NA	False	NA	NA	False	ACTAAA	-34	NA	49278177	49290860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_60947.known	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	308.223133460161	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244549	True	NA	16	True	AATAAA	-17	NA	49278639	49289260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_60949.known	chr20	+	946	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_3	330.942089596755	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278177	49289260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
transcript_6095.known	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_9	62.5503254178309	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	112618660	True	NA	10	True	AATATA	-18	NA	112619831	112671616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_60953.known	chr20	+	504	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	355.359911451287	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244551	True	NA	16	True	AATAAA	-17	NA	49278641	49289260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
transcript_60958.known	chr20	+	860	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	499	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278177	49289260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49289044
transcript_60960.known	chr20	+	627	2	FSM	ENSG00000177410.13	ENST00000667889.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1272	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATTCTCACAGTT	49244551	True	NA	NA	False	AAAAAG	-15	NA	49278641	49279655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103
transcript_60961.known	chr20	+	640	2	FSM	ENSG00000177410.13	ENST00000663883.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTGAATGTTTTATT	49244551	True	NA	NA	False	AAAAAG	-6	NA	49278641	49279646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278739_49279103
transcript_60964.known	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-49914300	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49906846_49908154_49908593_49915379
transcript_60965.nnic	chr20	+	1441	7	NNC	ENSG00000124226.11	novel	2447	6	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_6	426.441770155473	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTGGTAAGCTATGGT	49924484	True	NA	6	True	AATAAA	-14	NA	49936357	49953880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075_49952138_49953177
transcript_60967.known	chr20	+	2447	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_2	64.2171316706064	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	49924523	True	NA	11	True	AATAAA	-19	NA	49936396	49953885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_60969.known	chr20	+	2438	6	FSM	ENSG00000124226.11	ENST00000622999.3	2438	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	464.00068965466	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAGTGGTAAGCTATG	49924503	True	NA	4	True	AATAAA	-12	NA	49936376	49953878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49941582_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_60970.known	chr20	+	580	5	FSM	ENSG00000124226.11	ENST00000625177.3	580	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	480.267828924653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGACCAGTGAGCAGAGT	49924525	True	NA	-56	True	NA	NA	NA	49936398	49952128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49952075
transcript_60972.known	chr20	+	624	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	512.622912090359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	49924462	True	NA	-32	True	NA	NA	NA	49936335	49952152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_60974.known	chr20	+	1705	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	49982364	True	NA	NA	False	AATAAA	-24	NA	49982979	49988886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49983142_49983823_49984352_49987871
transcript_60978.known	chr20	-	2459	5	FSM	ENSG00000244687.13	ENST00000371677.7	2459	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1405.64778216309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484_50115622_50115698
transcript_60986.known	chr20	-	2258	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1432.34440690778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094475	True	NA	-1	True	AATAAA	-25	NA	50113198	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
transcript_60994.known	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2636	junction_3	123.839501865205	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094427	True	NA	-1	True	AATAAA	-25	NA	50113150	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
transcript_60995.known	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1299.25217807099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
transcript_60996.known	chr20	-	535	4	FSM	ENSG00000244687.13	ENST00000492371.6	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1384.75132143725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAGAAAAACCACAGG	-50114895	True	NA	6	True	NA	NA	NA	50115954	50082767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50115484_50115622_50115829
transcript_61.known	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00162_+_0_500
transcript_61007.known	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	1427	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094449	True	NA	-1	True	AATAAA	-25	NA	50113172	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50113106
transcript_61008.known	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1307.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094416	True	NA	-1	True	AATAAA	-25	NA	50113139	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50096671_50096821_50113106
transcript_61011.known	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50115484
transcript_61014.known	chr20	-	649	3	FSM	ENSG00000244687.13	ENST00000461960.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTCAAGAAATTGATTT	-50094402	True	NA	NA	False	NA	NA	NA	50113125	50095789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50096271_50096671_50096821_50113106
transcript_61017.known	chr20	-	494	2	FSM	ENSG00000237595.6	ENST00000670975.2	502	2	6	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTGTGTGTGTGTGTG	-50166170	True	NA	NA	False	AAGAAA	-12	NA	50166194	50162766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50163096_50166029
transcript_61019.known	chr20	+	3979	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	6.28539361054709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	50504488	True	NA	NA	False	ATTAAA	-21	NA	50510382	50585241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_61022.nic	chr20	+	1837	9	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-10	3383	-10	-2902	5prime_fragment	FALSE	canonical	3	46	junction_4	5.79735931265262	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGTAGGCACTTATGAAA	50504478	True	NA	NA	False	TATAAA	-36	NA	50510372	50581858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264
transcript_61024.nic	chr20	+	591	5	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-62	10695	0	-10214	5prime_fragment	FALSE	canonical	3	46	junction_4	7.07106781186548	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGAGATGATCTT	50504426	True	NA	NA	False	NA	NA	NA	50510320	50574546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516
transcript_61027.known	chr20	+	787	6	FSM	ENSG00000124243.19	ENST00000609336.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	123.869931783302	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	50791345	True	NA	1	True	TTTAAA	-15	NA	50795030	50876723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
transcript_61030.known	chr20	+	1114	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	11.1130553854464	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	50791375	True	NA	16	True	AATAAA	-16	NA	50795060	50877177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
transcript_61034.known	chr20	+	365	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	107.524674170888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCACCCCCGCACCTG	50791384	True	NA	NA	False	NA	NA	NA	50795069	50876572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
transcript_61036.known	chr20	-	1084	10	FSM	ENSG00000000419.14	ENST00000371584.9	1084	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	150.265772779884	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCTCAATTTTCGT	-50956420	True	NA	-30	True	ATTAAA	-27	NA	50958532	50934944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941104_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61037.known	chr20	-	1161	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	148.606199295776	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956443	True	NA	-18	True	AATAAA	-26	NA	50958555	50934866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61038.known	chr20	-	1054	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_8	32.4027390817505	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956420	True	NA	-21	True	AATAAA	-23	NA	50958532	50934869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_6104.known	chr1	-	990	4	FSM	ENSG00000007341.19	ENST00000467335.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	63.9079198708753	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGCAGTTTGTGATATT	NA	False	NA	-3	True	AATAAA	-17	NA	112619774	112610458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112611004_112616812_112616896_112618908_112619140_112619643
transcript_61040.known	chr20	-	1097	9	FSM	ENSG00000000419.14	ENST00000466152.5	1097	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	128.686088506101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956438	True	NA	-18	True	AATAAA	-26	NA	50958550	50934866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940956_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61043.nic	chr20	-	1018	8	NIC	ENSG00000000419.14	novel	1054	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	123.138548151326	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956453	False	NA	-21	True	AATAAA	-23	NA	50958565	50934869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_50935237_50936147_50936263_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61044.known	chr20	-	959	7	FSM	ENSG00000000419.14	ENST00000683048.1	959	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	165.891195935435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956420	True	NA	-21	True	AATAAA	-23	NA	50958532	50934869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_6105.known	chr1	+	739	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	65.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAATCTAAACTTG	112618633	True	NA	NA	False	NA	NA	NA	112619804	112650013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112619884_112647209_112647274_112649417
transcript_61063.known	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	49.5939064357261	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	-51793908	True	NA	-38	True	AATAAA	-23	NA	51802521	51782330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
transcript_61064.known	chr20	-	1918	4	FSM	ENSG00000101115.13	ENST00000395997.3	1918	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	97.1642366763044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAACTTGCGTGGAAGG	-51793862	True	NA	-89	True	AAGAAA	-21	NA	51802475	51784264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_51784685_51788860_51789142_51791332_51792353_51802278
transcript_61067.known	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	23.832750575626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189578	True	NA	-13	True	AATAAA	-22	NA	52191768	52151277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
transcript_61068.known	chr20	-	762	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	13.4420050587701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	-52104900	False	147	NA	False	NA	NA	NA	52104923	52085240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_61069.known	chr20	-	2234	5	FSM	ENSG00000020256.20	ENST00000371523.8	2234	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	13.0575648572006	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	NA	False	NA	-5	True	AATAAA	-19	NA	52105644	52084010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52105131
transcript_61070.known	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.761176830544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189570	True	NA	-13	True	AATAAA	-22	NA	52191760	52151277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
transcript_61073.known	chr20	-	1841	9	FSM	ENSG00000020256.20	ENST00000371518.6	1841	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.6708505944808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTTATGGAATAAATA	-52189589	True	NA	NA	False	NA	NA	NA	52191779	52051662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52052133_52088391_52088644_52097372_52097436_52098437_52098588_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
transcript_61079.known	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2746	junction_1	173.513368040877	1849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	54172669	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
transcript_61081.known	chr20	+	1965	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	3.49343407446785	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	54474809	True	NA	10	True	AATAAA	-18	NA	54475592	54651169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
transcript_61083.known	chr20	+	742	2	FSM	ENSG00000101134.12	ENST00000491469.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTACATTGAATT	54474842	True	NA	5	True	AATAAA	-17	NA	54475625	54495154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_54476013_54494799
transcript_61084.known	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	56357005	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56359192_56365086_56365263_56366070
transcript_61090.nic	chr20	-	2300	11	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	388.918294761252	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378475	True	NA	-17	True	AATAAA	-15	NA	56392274	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392167
transcript_61098.known	chr20	-	2145	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	379.653773396658	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378416	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
transcript_61099.known	chr20	-	2112	10	FSM	ENSG00000087586.18	ENST00000371356.6	2112	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	377.79830009617	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378397	True	NA	-17	True	AATAAA	-15	NA	56392196	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392167
transcript_6110.known	chr1	-	752	2	FSM	ENSG00000007341.19	ENST00000470683.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	-112615855	True	NA	1	True	AATAAA	-21	NA	112619111	112610454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112611004_112618908
transcript_61101.nic	chr20	-	2404	10	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	367.766062250461	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378452	True	NA	-17	True	AATAAA	-15	NA	56392251	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56391942
transcript_61102.known	chr20	-	2238	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	374.090139002307	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGTGCTGTGTAATT	-56378496	True	NA	-16	True	AATAAA	-16	NA	56392295	56369388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
transcript_61103.known	chr20	-	2223	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	361.773034366938	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378496	True	NA	-17	True	AATAAA	-15	NA	56392295	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
transcript_6111.known	chr1	-	685	4	FSM	ENSG00000007341.19	ENST00000498383.5	685	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	62.9655990733565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	-112615855	True	NA	1	True	AATAAA	-21	NA	112619111	112610454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112610691_112610840_112611004_112616812_112616896_112618908
transcript_61113.known	chr20	-	2248	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	296.17855151074	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378406	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
transcript_61115.known	chr20	-	2169	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	281.392408390845	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392337	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
transcript_61116.known	chr20	-	2033	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	253.331798240963	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378416	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_6112.known	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	147	junction_1	76.5364455668017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	112673931	True	NA	24	True	AAGAAA	-33	NA	112674486	112700739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_6114.known	chr1	+	3383	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	58.2238968179288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	112671994	True	NA	-5	True	AAGAAA	-4	NA	112674744	112700710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_61143.nic	chr20	+	1831	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-13	-413	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	116.403780007352	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTCATTTGGTTCTT	NA	False	NA	8	True	ATTAAA	-16	NA	56392357	56404049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61144.nic	chr20	+	2037	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-13	-207	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	116.403780007352	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	NA	False	NA	5	True	AATAAA	-15	NA	56392357	56404255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61146.known	chr20	+	4032	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	44.7633778886268	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	56389399	True	NA	8	True	AATAAA	-16	NA	56392644	56406362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_6115.known	chr1	-	1028	6	FSM	ENSG00000155366.17	ENST00000369638.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	254.019369340214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTTATACACTTCTG	-112700001	True	NA	NA	False	NA	NA	NA	112707135	112701274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705052_112705169_112707077
transcript_61153.nic	chr20	+	1821	6	NIC	ENSG00000101138.12	novel	4032	6	NA	NA	0	-413	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	143.072009841198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTCATTTGGTTCTT	56389399	True	NA	8	True	ATTAAA	-16	NA	56392644	56404049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61154.nic	chr20	+	2027	6	NIC	ENSG00000101138.12	novel	4032	6	NA	NA	0	-207	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	143.072009841198	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	56389399	True	NA	5	True	AATAAA	-15	NA	56392644	56404255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_6116.known	chr1	-	888	6	FSM	ENSG00000155366.17	ENST00000369637.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	236.355156491243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCCCTTTGACCTTCCC	-112699991	True	NA	NA	False	NA	NA	NA	112707125	112701312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705124_112707077
transcript_61166.nnic	chr20	+	1449	11	Fusion	ENSG00000213714.1_ENSG00000022277.13	novel	1745	10	NA	NA	5	0	multi-exon	FALSE	canonical	3	11	junction_9	277.128057042227	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGTTTGAGAGCTTG	56462264	True	NA	NA	False	AATAAA	-20	NA	56468589	56536520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56527123_56527206_56533422_56533591_56536171
transcript_6117.known	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	236.029659153251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	-112699945	True	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
transcript_61171.known	chr20	+	1745	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	247.682193820635	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	NA	False	NA	25	True	AATAAA	-21	NA	56468584	56518886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_61172.known	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_7	32.6417581481145	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	56462301	True	NA	2	True	AATAAA	-13	NA	56468626	56519449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_61176.known	chr20	+	1572	8	FSM	ENSG00000022277.13	ENST00000395881.7	1572	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	217.964516865119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	56462288	True	NA	26	True	AATAAA	-22	NA	56468613	56518887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56517105_56517202_56518086
transcript_6118.known	chr1	-	1117	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	212.039053006752	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-112699993	True	NA	-35	True	AATAAA	-16	NA	112707127	112701130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
transcript_61181.known	chr20	-	4021	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	12.7856256093404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCCTGTGTCTGTCT	-57265944	True	NA	-15	True	AATAAA	-21	NA	57266641	57168752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_61182.known	chr20	-	1746	6	FSM	ENSG00000101144.13	ENST00000395864.7	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	62.9933329805623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAATGTCACAATAA	-57266313	False	NA	-74	True	NA	NA	NA	57266342	57170530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57202474_57202624_57228228_57228422_57265704
transcript_61184.nnic	chr20	+	1757	13	NNC	ENSG00000101146.13	novel	2385	12	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_12	154.365614874413	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGAGCTTCCTTTGTCCT	57347317	True	NA	38	True	AATAAA	-18	NA	57351225	57378457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57376178_57376267_57378012
transcript_61187.known	chr20	+	2385	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	23.631468024474	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	57347346	True	NA	4	True	AATAAA	-19	NA	57351254	57379202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_61193.known	chr20	+	2362	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	121.184648401786	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTTTAAATTCTTT	57347314	True	NA	13	True	AATAAA	-28	NA	57351222	57379211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_61196.known	chr20	+	1156	11	FSM	ENSG00000101146.13	ENST00000492498.5	1156	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	138.4241308443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGACTCTGGCTCA	57347365	True	NA	NA	False	NA	NA	NA	57351273	57378099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373662_57373739_57374606_57374802_57378012
transcript_61202.known	chr20	-	4519	4	FSM	ENSG00000124225.16	ENST00000395816.7	4519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.8074886779719	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTCACTTCTTTGGCC	-57709803	True	NA	2	True	AATAAA	-23	NA	57710569	57648391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710466
transcript_61204.known	chr20	-	4627	4	FSM	ENSG00000124225.16	ENST00000265626.8	4627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.8074886779719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTCACTTCTTTGG	NA	False	NA	0	True	AATAAA	-21	NA	57711536	57648393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57711323
transcript_61205.known	chr20	+	2625	1	FSM	ENSG00000278709.2	ENST00000614771.2	2625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTATTTTTCTTTGC	57709595	True	NA	39	True	GATAAA	-44	NA	57710155	57712780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57710200_57712800
transcript_61206.known	chr20	-	1474	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.9252361059697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGTCGTGTGTTG	-58308598	True	NA	-6	True	ATTAAA	-13	NA	58309439	58245745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_61207.nic	chr20	-	1246	9	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	-13	1310	0	0	5prime_fragment	FALSE	canonical	3	29	junction_8	7.95298686029343	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	-58308611	True	NA	NA	False	ATTAAA	-15	NA	58309452	58247055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_61211.nnic	chr20	-	539	2	NNC	ENSG00000124224.18	novel	4680	10	NA	NA	6281	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTATGTCCTGTTCCAT	-58229386	True	NA	-9	True	AATAAA	-21	NA	58229606	58228940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_58229194_58229320
transcript_61212.known	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	10.0876161703348	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	58387011	True	NA	13	True	AATAAA	-25	NA	58389228	58451101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
transcript_61215.known	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	58389294	False	NA	19	True	AATAAA	-17	NA	58389312	58445552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58389518_58418210_58418364_58444076
transcript_61217.known	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_8	71.2515042613427	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	58690933	True	NA	20	True	ATTAAA	-22	NA	58692799	58715844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_61219.known	chr20	+	4897	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	117.170748802762	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58639361	True	NA	43	True	ATTAAA	-32	NA	58651271	58679526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61221.known	chr20	+	4937	9	FSM	ENSG00000124222.22	ENST00000371141.8	4937	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	122.76902856584	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58639372	True	NA	43	True	ATTAAA	-32	NA	58651282	58679526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61222.known	chr20	+	942	8	FSM	ENSG00000124222.22	ENST00000467096.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	141.81318553589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGGTGTGAGGGGCTT	58651757	False	NA	NA	False	NA	NA	NA	58651865	58676328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61227.known	chr20	-	594	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTTTGCTCTTGTAT	NA	False	NA	0	True	AATAAA	-18	NA	58817725	58817131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58817100_58817700
transcript_61229.known	chr20	+	1567	13	FSM	ENSG00000087460.29	ENST00000657090.1	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837165	False	NA	19	True	AATAAA	-21	NA	58839782	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58839941_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_6123.known	chr1	-	1355	5	FSM	ENSG00000155366.17	ENST00000369642.7	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	96.5307593464384	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-112706160	False	NA	-35	True	AATAAA	-16	NA	112707434	112701130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112707077
transcript_61230.nnic	chr20	+	1578	13	NNC	ENSG00000087460.29	novel	3921	12	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_1	1957.95877801063	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	58833658	False	NA	17	True	AATAAA	-19	NA	58841050	58911190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_58841222_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61231.known	chr20	+	1666	13	FSM	ENSG00000087460.29	ENST00000663479.2	1666	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2302.68099180064	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839228	True	NA	19	True	AATAAA	-21	NA	58841621	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61234.known	chr20	+	4027	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	1958.77148821795	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852397	True	NA	19	True	AATAAA	-21	NA	58852715	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61235.known	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888838	False	NA	19	True	AATAAA	-21	NA	58888848	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61237.known	chr20	+	1476	13	FSM	ENSG00000087460.29	ENST00000464788.6	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1976.72300896374	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881092	True	NA	19	True	AATAAA	-21	NA	58889146	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889214_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61239.known	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	1971.60925529263	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58891953	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61240.known	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1980.00153444104	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892302	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61245.known	chr20	+	1625	12	FSM	ENSG00000087460.29	ENST00000462499.6	1625	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2293.2636168851	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839224	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58841876_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61246.known	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	2085.67831881783	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839224	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61248.known	chr20	+	3438	12	FSM	ENSG00000087460.29	ENST00000371102.8	3438	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2298.91911360733	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852944	False	NA	19	True	AATAAA	-21	NA	58853262	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58855334_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61249.known	chr20	+	3432	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	2092.03021326728	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852947	False	NA	19	True	AATAAA	-21	NA	58853265	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61252.known	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	2013.02736532659	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	58881116	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61253.known	chr20	+	1793	12	FSM	ENSG00000087460.29	ENST00000485673.6	1793	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2318.47548942	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881069	True	NA	19	True	AATAAA	-21	NA	58889123	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889550_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61254.known	chr20	+	1499	12	FSM	ENSG00000087460.29	ENST00000492907.6	1499	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2310.85537452768	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892047	False	NA	19	True	AATAAA	-21	NA	58892077	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892210_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61255.known	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	2105.42180850668	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892006	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_6127.known	chr1	+	587	3	FSM	ENSG00000224167.3	ENST00000456651.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAGTAATATGAGTGT	112849894	False	NA	7	True	AATAAA	-16	NA	112850027	112877871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112850428_112876939_112876985_112877729
transcript_61272.known	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8874953737966	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-58848506	True	NA	-6	True	AATAAA	-33	NA	58850903	58818918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
transcript_61273.known	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	1865.41719792492	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837130	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61274.known	chr20	+	1417	12	FSM	ENSG00000087460.29	ENST00000481039.6	1417	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2320.38551228451	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888826	True	NA	19	True	AATAAA	-21	NA	58888858	58911192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58888909_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61277.known	chr20	+	2137	16	FSM	ENSG00000101158.15	ENST00000460601.5	2137	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	116.332206298266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	58973710	True	NA	38	True	AGTAAA	-34	NA	58981274	58995133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641_58994825_58994925
transcript_61281.nic	chr20	+	2157	15	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	110	junction_13	106.180943945431	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973682	True	NA	18	True	AGTAAA	-14	NA	58981246	58995113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641
transcript_61282.known	chr20	+	2237	15	FSM	ENSG00000101158.15	ENST00000652272.2	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_13	48.041064492276	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973691	True	NA	18	True	AGTAAA	-14	NA	58981255	58995113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
transcript_6129.nic	chr1	-	801	3	FSM	ENSG00000215866.9	ENST00000691250.1	700	3	-101	0	-101	0	multi-exon	FALSE	canonical	3	676	junction_1	218	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112821418	True	NA	0	True	AATAAA	-23	NA	112825842	112820169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820539_112823652_112823755_112825512
transcript_61299.known	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_2	177.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-59011449	True	NA	-7	True	AATAAA	-16	NA	59032335	59025474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59028842_59030302_59030430_59032219
transcript_61300.known	chr20	-	1878	2	FSM	ENSG00000124172.10	ENST00000395659.1	1878	2	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGTGAGACTTTT	-59011459	True	NA	-5	True	AATAAA	-29	NA	59032345	59028677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59030430_59032219
transcript_61301.known	chr20	-	2503	6	FSM	ENSG00000101166.16	ENST00000355937.9	2503	6	0	0	0	0	multi-exon	TRUE	canonical	3	546	junction_3	51.6581068178074	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCCTGATTATAATT	-59035440	True	NA	-4	True	AATAAA	-18	NA	59042786	59033144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037281_59038465_59038635_59042698
transcript_61302.known	chr20	-	704	6	FSM	ENSG00000101166.16	ENST00000463057.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	246.32774914735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	-59042648	False	NA	-16	True	AATACA	-18	NA	59042732	59034908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037300_59038465_59038635_59042698
transcript_61308.known	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	261.379991583136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	-59035459	True	NA	NA	False	NA	NA	NA	59042805	59034633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
transcript_6131.known	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	344.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	112826268	112820177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820542_112823652_112823755_112825512
transcript_61313.known	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6562449087639	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	59938909	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
transcript_61316.known	chr20	+	1429	7	FSM	ENSG00000124215.17	ENST00000497614.1	1429	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATTTCTATGATTATG	59994187	False	NA	NA	False	AATAAA	-21	NA	59994207	60013113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_59994490_59995832_59996055_59996630_59996762_59999585_59999664_60002812_60002867_60006712_60006788_60012526
transcript_61319.nnic	chr20	+	1358	4	NNC	ENSG00000276627.3	novel	804	3	NA	NA	-4569	-3462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.94392028877595	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAAATTGG	60750392	True	NA	NA	False	AAAAAG	-7	NA	60750431	60759248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_60750977_60754906_60755161_60756037_60756258_60758909
transcript_61323.known	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	1789.30437290275	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-62110954	True	NA	-4	True	TTTAAA	-23	NA	62143440	62136802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
transcript_61324.known	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4096	junction_4	573.471494980836	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	-62110908	True	NA	-20	True	AATAAA	-16	NA	62143394	62136732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
transcript_6133.known	chr1	+	490	2	FSM	ENSG00000224167.3	ENST00000422022.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	112850065	False	NA	3	True	AATAAA	-12	NA	112850075	112877867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112850428_112877729
transcript_61336.nnic	chr20	+	1059	7	NNC	ENSG00000101181.18	novel	3747	7	NA	NA	-26	-26	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	30.8945338566909	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACCCATTAAAAATAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	62183001	62200240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200068
transcript_61337.known	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_3	22.9401394939089	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	62181430	True	NA	16	True	CATAAA	-19	NA	62183027	62203568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_6134.known	chr1	-	767	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	454.878738420105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112849718	True	NA	0	True	AATAAA	-23	NA	112849815	112820169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
transcript_61340.known	chr20	+	2814	6	FSM	ENSG00000101181.18	ENST00000467101.5	2814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.1022657834777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGGGGACAAAGAAGCA	62181446	True	NA	NA	False	NA	NA	NA	62183043	62202767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62198633_62198853_62199118_62199258_62200682
transcript_61342.known	chr20	+	590	2	FSM	ENSG00000101181.18	ENST00000488748.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	16	True	CATAAA	-19	NA	62202738	62203568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62202844_62203083
transcript_61343.known	chr20	+	667	2	FSM	ENSG00000101181.18	ENST00000466933.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCCTGTCTC	62181431	True	NA	NA	False	NA	NA	NA	62183028	62194053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62183058_62193415
transcript_61345.known	chr20	+	3944	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_12	18.3280429878182	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	62233465	True	NA	7	True	AATAAA	-17	NA	62238520	62296183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_61348.known	chr20	+	3936	14	FSM	ENSG00000130703.17	ENST00000358053.3	3936	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	71.5984033407641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCGTTTGGGTGTGAG	62233465	True	NA	35	True	AATAAA	-45	NA	62238520	62296211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62238598_62256056_62256222_62260016_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_61351.known	chr20	+	3886	13	FSM	ENSG00000130703.17	ENST00000439951.6	3886	13	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	71.6135462046113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTTTGGGTGTGAGTA	62233429	True	NA	37	True	NA	NA	NA	62238484	62296213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62291702_62291794_62293784
transcript_61352.nic	chr20	+	1310	9	ISM	ENSG00000130703.17	ENST00000642516.1	3427	16	-49	12769	-5	0	5prime_fragment	FALSE	canonical	3	251	junction_1	16.3090274081565	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTCTAGGTGGCTTGTT	62233444	True	NA	5	True	AATAAA	-16	NA	62238499	62282091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789
transcript_61355.known	chr20	+	2683	15	FSM	ENSG00000130703.17	ENST00000643412.1	2683	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	93.5287798116774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACAGTGGTGTAATTA	62233508	True	NA	-21	True	NA	NA	NA	62238563	62294851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62238598_62242320_62242435_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_61357.known	chr20	+	1379	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	0	0	0	multi-exon	FALSE	canonical	3	1925	junction_6	217.208098432566	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	62278195	True	NA	19	True	AATAAA	-22	NA	62302996	62308862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_61360.known	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	732.059594568639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	62302870	False	NA	17	True	AATAAA	-20	NA	62302895	62308860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_61364.known	chr20	-	11426	80	FSM	ENSG00000130702.15	ENST00000252999.7	11426	80	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_57	152.448691135535	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATGAATGTTGACTTAA	-62358182	True	NA	69	True	ATTAAA	-18	NA	62367312	62309064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62312887_62313011_62313087_62313251_62313326_62313461_62313648_62313803_62314303_62314441_62314554_62314726_62314798_62314948_62315027_62315208_62315947_62316059_62316670_62316774_62316881_62317024_62317344_62317500_62317661_62317779_62318453_62318651_62318842_62319014_62319683_62319796_62320558_62320670_62320738_62320891_62322018_62322169_62322268_62322450_62322657_62322759_62323455_62323671_62323775_62323857_62324079_62324205_62324440_62324555_62325315_62325547_62326676_62326761_62326864_62326967_62327232_62327407_62327528_62327670_62327865_62328011_62328240_62328446_62328843_62329056_62329137_62329254_62329776_62329917_62330487_62330615_62330742_62330945_62331031_62331130_62332371_62332481_62332556_62332718_62333089_62333244_62333374_62333482_62333563_62333707_62333900_62334040_62334185_62334343_62334521_62334622_62335020_62335127_62335216_62335270_62336339_62336446_62336733_62336787_62337589_62337728_62337803_62337939_62338015_62338151_62338231_62338370_62338467_62338609_62345817_62345878_62346080_62346216_62346505_62346597_62346681_62346801_62346912_62347029_62351703_62351802_62351908_62352080_62352241_62352361_62353133_62353252_62362399_62362553_62366948
transcript_61367.known	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	-62386160	True	NA	-3	True	AGTAAA	-18	NA	62386970	62386302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62386300_62387000
transcript_61372.known	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	4434	junction_5	1373.06649511231	21348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	62260501	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
transcript_61373.known	chr20	+	429	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	0	0	0	0	multi-exon	FALSE	canonical	3	5559	junction_1	962.731368295435	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260521	True	NA	13	True	AATAAA	-13	NA	62387122	62388519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
transcript_61374.known	chr20	+	418	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	7051	junction_3	412.002427177317	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260716	False	NA	13	True	AATAAA	-13	NA	62387317	62388519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
transcript_61376.known	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_11	16.1828396000412	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62639808	True	NA	15	True	AATATA	-19	NA	62642502	62672293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
transcript_6138.known	chr1	-	3753	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_2	91.3492610807553	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-112942784	True	NA	-13	True	AATAAA	-18	NA	112956196	112911846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
transcript_61380.known	chr20	-	846	3	FSM	ENSG00000228705.3	ENST00000658884.1	846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	NA	False	NA	NA	False	AATAAA	-15	NA	62776996	62774120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62774570_62775314_62775521_62776805
transcript_61381.known	chr20	-	758	3	FSM	ENSG00000228705.3	ENST00000689171.1	1906	3	7	1141	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	-62776891	True	NA	NA	False	AATAAA	-15	NA	62776949	62774120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62774570_62775314_62775480_62776805
transcript_61384.known	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	22.0963797939844	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	62792825	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
transcript_61387.known	chr20	+	2410	7	FSM	ENSG00000060491.17	ENST00000290291.10	2410	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	10.9455724179028	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62801260	True	NA	19	True	AATAAA	-16	NA	62804834	62814000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229
transcript_61390.nic	chr20	+	1339	7	ISM	ENSG00000092758.18	ENST00000466192.5	2194	8	1700	-15	-5	0	3prime_fragment	TRUE	canonical	3	398	junction_1	34.9602949390051	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	62832645	True	NA	16	True	AATAAA	-32	NA	62832839	62841159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_61398.known	chr20	-	2707	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	71.5524982093567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	-62924357	True	NA	-14	True	TATAAA	-17	NA	62926469	62905004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
transcript_61399.known	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	77.6273147803014	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-62932877	True	NA	-7	True	TATAAA	-24	NA	62937952	62904997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_61402.known	chr20	-	677	1	FSM	ENSG00000273759.1	ENST00000619319.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGCTAGTGGAGTTC	-62924222	False	5075	0	True	AATAAA	-19	NA	62929297	62928620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62928600_62929300
transcript_61407.known	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	10.0840220150494	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	62932523	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
transcript_61411.known	chr20	+	3518	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_5	28.9581834528495	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTTTGTGTATCTGT	62950702	True	NA	5	True	AATAAA	-16	NA	62952708	62969585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_61413.known	chr20	-	3198	5	FSM	ENSG00000149658.18	ENST00000370339.8	3198	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	15.2643375224737	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTCACCTCATTCTT	-63209701	True	NA	-3	True	AATAAA	-18	NA	63216131	63195428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
transcript_61419.known	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	12.8894875339902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254170	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_61423.known	chr20	-	1421	6	FSM	ENSG00000101198.15	ENST00000370313.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	30.958036113423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63253415	False	NA	-5	True	AATAAA	-18	NA	63253437	63240783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_61424.nic	chr20	-	1333	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	20.9380037252838	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254235	True	NA	-5	True	AATAAA	-18	NA	63254528	63240783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_61425.nic	chr20	-	876	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-65	36	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	20.9380037252838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAACCCCACATGCCCA	-63254235	True	NA	NA	False	AAAAAG	-24	NA	63254528	63241240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_61426.nic	chr20	+	3068	14	NIC	ENSG00000101199.13	novel	3467	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	133	junction_13	74.7942345023525	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	63265285	True	NA	16	True	AATAAA	-16	NA	63272811	63289788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563_63289497_63289677
transcript_61427.known	chr20	+	3250	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	41.709311510341	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	63265286	True	NA	18	True	AATAAA	-18	NA	63272812	63289790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_61434.known	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	45.0653845971483	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	63505971	True	NA	13	True	NA	NA	NA	63520764	63522206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
transcript_61436.known	chr20	+	478	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCGCATCCCTCGCC	63505983	True	NA	NA	False	NA	NA	NA	63520776	63521949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63520895_63521511_63521590_63521667
transcript_61437.known	chr20	+	1090	2	FSM	ENSG00000125531.7	ENST00000370097.2	1090	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	63554133	True	NA	31	True	AATAAA	-43	NA	63554158	63556695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63554207_63555653
transcript_61438.known	chr20	-	1827	4	FSM	ENSG00000130589.16	ENST00000370082.1	1827	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-63573066	True	NA	NA	False	NA	NA	NA	63574239	63570138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63570612_63570684_63570869_63572107_63573222_63574183
transcript_61439.known	chr20	+	582	2	FSM	ENSG00000232442.2	ENST00000411579.2	614	2	29	3	-1	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGCTACTATTTTAT	63626842	True	NA	7	True	AATAAA	-18	NA	63627249	63628707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63627393_63628268
transcript_61440.nnic	chr20	-	2027	6	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.526499093265	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63650670	True	NA	-15	True	AATAAA	-18	NA	63653538	63639711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63640560_63640894_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_61442.known	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	101.801277005743	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63650556	True	NA	-15	True	AATAAA	-18	NA	63653424	63639711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_61443.nnic	chr20	-	1608	4	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9741	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.783650203029	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63641920	True	NA	-15	True	AATAAA	-18	NA	63642653	63639711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63640560_63640894_63641398_63642107_63642300_63642588
transcript_61445.nnic	chr20	-	1943	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9741	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	105.5	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63641920	True	NA	-15	True	AATAAA	-18	NA	63642653	63639711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63641398_63642107_63642300_63642588
transcript_61453.known	chr20	-	1623	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	64.9565003581282	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704492	True	NA	-2	True	NA	NA	NA	63707838	63699455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
transcript_61454.nic	chr20	-	1755	8	NIC	ENSG00000101246.20	novel	1623	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	112	junction_7	42.954175867892	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704681	True	NA	-2	True	NA	NA	NA	63708027	63699455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61456.known	chr20	-	2518	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_7	57.5052792607526	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCTTCTATTTAAA	-63704630	True	NA	NA	False	TATAAA	-17	NA	63707976	63698646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_61459.nic	chr20	-	1618	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	112	junction_7	42.954175867892	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-63704585	True	NA	-27	True	AATAAA	-28	NA	63707931	63699496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61463.nic	chr20	-	875	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	4	-227	combination_of_known_junctions	FALSE	canonical	3	112	junction_7	42.954175867892	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTAGGCATCCGGAGGCTT	-63704626	True	NA	-4	True	NA	NA	NA	63707972	63700280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61471.nic	chr20	+	1861	7	NIC	ENSG00000197114.12	novel	1867	7	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_4	86.6649038282254	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705388	True	NA	21	True	ATTAAA	-21	NA	63708017	63736142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_61473.known	chr20	+	1867	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	57.3323643328967	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705409	True	NA	21	True	ATTAAA	-21	NA	63708038	63736142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_61475.nic	chr20	+	1918	7	NIC	ENSG00000197114.12	novel	1867	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	79.5864310042862	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705409	True	NA	21	True	ATTAAA	-21	NA	63708038	63736142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_63708170_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_61479.known	chr20	+	1896	7	FSM	ENSG00000197114.12	ENST00000357119.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	90.2140971984608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705423	True	NA	21	True	ATTAAA	-21	NA	63708052	63736142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_6148.known	chr1	+	742	3	FSM	ENSG00000226419.8	ENST00000416193.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	14	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	112955864	True	NA	18	True	AATAAA	-15	NA	112956414	112964072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112956957_112960476_112960576_112963971
transcript_61480.known	chr20	+	1945	7	FSM	ENSG00000197114.12	ENST00000328969.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	92.6300887041211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705460	True	NA	20	True	ATTAAA	-20	NA	63708089	63736141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_61481.known	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	63.894878946247	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705456	True	NA	21	True	ATTAAA	-21	NA	63708085	63736142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_61483.known	chr20	-	1612	7	FSM	ENSG00000101246.20	ENST00000618568.4	1612	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	85.1971569687367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-63704650	True	NA	-27	True	AATAAA	-28	NA	63707996	63699496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61486.nic	chr20	-	1804	7	NIC	ENSG00000101246.20	novel	1698	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	112	junction_6	46	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-63704681	True	NA	-8	True	NA	NA	NA	63708027	63699477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61487.known	chr20	-	1698	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	62.0360558241916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-63704570	True	NA	-8	True	NA	NA	NA	63707916	63699477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_61489.known	chr20	+	2831	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	61.9561134997992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705409	True	NA	20	True	ATTAAA	-20	NA	63708038	63736141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
transcript_6149.known	chr1	+	1897	3	FSM	ENSG00000226419.8	ENST00000420168.2	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGTAGAGCTGGCCG	112956500	False	NA	NA	False	AAAACA	-3	NA	112956519	112969395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112956957_112960476_112960576_112968034
transcript_61496.known	chr20	+	2410	4	FSM	ENSG00000203896.10	ENST00000621325.1	2410	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	15.1730755689881	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	63736289	False	NA	8	True	AATAAA	-23	NA	63736317	63739103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63737648_63737820_63737903_63738007_63738500_63738597
transcript_61497.known	chr20	+	2339	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	320.195794692522	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857619	True	NA	36	True	AATAAA	-26	NA	63865289	63891545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_61499.known	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	224.830800578766	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	63857599	True	NA	29	True	AATAAA	-19	NA	63865269	63891538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
transcript_61501.known	chr20	+	2275	7	FSM	ENSG00000101150.18	ENST00000358548.4	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	334.198751576896	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857623	True	NA	36	True	AATAAA	-26	NA	63865293	63891545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_61505.known	chr20	+	2237	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	154.484173946719	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857619	True	NA	36	True	AATAAA	-26	NA	63865289	63891545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
transcript_61508.known	chr20	+	2197	5	FSM	ENSG00000101150.18	ENST00000611972.4	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	345.650112107605	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857557	True	NA	36	True	AATAAA	-26	NA	63865227	63891545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63889189_63889239_63889849
transcript_61513.known	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_14	154.899243091127	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63953829	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_61520.nnic	chr20	-	1272	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	157.240878519395	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941759	False	NA	NA	False	AATAAA	-21	NA	63941783	63939828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
transcript_61521.nnic	chr20	-	1246	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	190.484987892077	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941759	False	NA	NA	False	AATAAA	-21	NA	63941783	63939828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135_63941209_63941382
transcript_61522.nnic	chr20	-	1004	7	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_6	146.579898576396	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941343	False	NA	NA	False	AATAAA	-21	NA	63941367	63939828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135
transcript_61524.known	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_11	84.1808172923024	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	63969835	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
transcript_61534.nic	chr20	+	482	3	ISM	ENSG00000101161.8	ENST00000266079.5	3047	21	-8	48074	-8	-48074	5prime_fragment	FALSE	canonical	3	623	junction_1	34	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAAATTGTTGCCTTT	63969827	True	NA	NA	False	GATAAA	-31	NA	63981123	63985026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_63981317_63983046_63983216_63984906
transcript_61535.known	chr20	+	1182	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	182	junction_6	68.7336961588297	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	64060488	True	NA	16	True	ATTAAA	-16	NA	64063197	64072347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_61538.known	chr20	-	1619	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	26.8432486856565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64079436	False	NA	-1	True	TTTAAA	-6	NA	64079518	64073180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
transcript_61539.known	chr20	-	1510	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	27.9899982136477	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64079906	False	82	-1	True	TTTAAA	-6	NA	64079988	64073180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_6154.known	chr1	+	1508	3	FSM	ENSG00000226419.8	ENST00000664314.1	1508	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	20.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	112955864	True	NA	18	True	AATAAA	-15	NA	112956414	112964072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112957723_112960476_112960576_112963971
transcript_61541.nnic	chr20	-	1373	5	NIC	ENSG00000171700.14	novel	1510	6	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	39.5434887181189	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64078804	True	NA	-1	True	TTTAAA	-6	NA	64079949	64073180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079872
transcript_61542.known	chr20	+	3402	5	FSM	ENSG00000125510.18	ENST00000336866.7	3402	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.44948974278318	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTAACCAGTGTTTC	64080012	True	NA	NA	False	AATAAA	-22	NA	64080081	64100633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_64080353_64091965_64092117_64092687_64092954_64097801_64098158_64098275
transcript_61543.known	chr20	+	3859	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	50.2633066958393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	64252785	True	NA	10	True	AATAAA	-18	NA	64255747	64276226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
transcript_61544.known	chr20	+	3212	6	FSM	ENSG00000203880.12	ENST00000369758.8	3212	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	143.132945194319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGCGCACCTTATAC	64252778	True	NA	14	True	AATAAA	-15	NA	64255740	64275653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267967_64268011_64273220
transcript_61545.known	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_20	102.023661471249	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	-5154644	False	NA	NA	False	ATTAAA	-16	NA	5154658	5130870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_6155.known	chr1	+	8803	3	FSM	ENSG00000226419.8	ENST00000428411.6	8803	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCATACTCTGTTCCAGGC	112955864	True	NA	8	True	AATAAA	-19	NA	112956414	112975430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112957723_112960476_112960576_112968034
transcript_61553.known	chr21	-	1584	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	304.574429874429	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-5123655	True	NA	NA	False	AATAAA	-17	NA	5128369	5116340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_61559.known	chr21	-	898	6	FSM	ENSG00000280071.4	ENST00000624120.3	898	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	405.577810043893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGATGTTTCTTCCTGGG	-5123658	True	NA	NA	False	NA	NA	NA	5128372	5116936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5117232_5118690_5118848_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_61564.known	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	314.561663271289	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	-5128258	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_61565.known	chr21	-	936	3	FSM	ENSG00000279094.3	ENST00000624261.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	37.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	5502542	5499150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5499810_5499998_5500102_5502368
transcript_61566.known	chr21	+	549	3	FSM	ENSG00000274333.4	ENST00000619252.4	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGGGCTCCCTAACA	NA	False	NA	NA	False	NA	NA	NA	5553636	5590200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_5553839_5585822_5585988_5590018
transcript_61569.known	chr21	+	835	2	FSM	ENSG00000274333.4	ENST00000623436.3	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATAGAGCCGGGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	5553668	5590683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_5553839_5590018
transcript_6157.known	chr1	-	452	2	FSM	ENSG00000155380.13	ENST00000478835.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGTCTGTATTAGGT	-112956137	False	NA	NA	False	NA	NA	NA	112956181	112929047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112929353_112956034
transcript_61572.known	chr21	-	859	3	FSM	ENSG00000275496.4	ENST00000617746.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	6267275	6230398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6234982_6235148_6267134
transcript_61574.known	chr21	-	465	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267313	6230665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6267134
transcript_61576.known	chr21	-	2380	4	FSM	ENSG00000275496.4	ENST00000621924.4	2380	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	6267304	6228965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6234982_6235148_6254790_6254850_6267134
transcript_61578.nnic	chr21	+	588	4	FSM	ENSG00000278903.4	ENST00000688458.1	608	4	20	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	40.6147209217982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6318421	6353289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_6318605_6320871_6320975_6322599_6322698_6353085
transcript_61579.nnic	chr21	+	765	4	FSM	ENSG00000278903.4	ENST00000692046.1	725	4	-38	-2	-2	0	multi-exon	FALSE	canonical	3	20	junction_3	16.4181471413663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6318437	6329955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_6318605_6320882_6320975_6322599_6322698_6329547
transcript_6158.known	chr1	+	11566	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_11	16.5228163521723	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	113068631	True	NA	5	True	AATAAA	-17	NA	113073197	113132260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
transcript_61581.nic	chr21	+	1488	2	ISM	ENSG00000278903.4	ENST00000688828.1	1395	3	24	72	0	-72	intron_retention	FALSE	canonical	3	106	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTATTTTTCATTGTAT	NA	False	NA	NA	False	AAAACA	-5	NA	6318421	6322176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_6318605_6320871
transcript_61595.known	chr21	-	963	9	FSM	ENSG00000275895.7	ENST00000620065.4	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	1980.24613369147	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTGGTGTAACTTAT	-6492970	False	NA	NA	False	AATAAA	-17	NA	6499202	6484625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
transcript_61606.known	chr21	-	945	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	3771	junction_6	907.400638289034	2388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-6493016	True	NA	NA	False	AATAAA	-20	NA	6499248	6484622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
transcript_61610.known	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2360	junction_5	1551.68765266357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	-6492970	False	NA	NA	False	NA	NA	NA	6499202	6484708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
transcript_61624.nnic	chr21	-	595	4	Fusion	ENSG00000278878.1_ENSG00000280145.3	novel	674	2	NA	NA	-27	-1479	multi-exon	FALSE	canonical	2	7	junction_1	20.5426385841741	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6670722	6635836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr21_-_6636041_6666428_6666527_6668151_6668244_6670521
transcript_61625.nnic	chr21	-	618	4	Fusion	ENSG00000278878.1_ENSG00000280145.3	novel	674	2	NA	NA	-39	-1479	multi-exon	FALSE	canonical	2	7	junction_1	37.6061460697879	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6670734	6635836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr21_-_6636041_6666428_6666527_6668151_6668255_6670521
transcript_61629.nnic	chr21	-	820	4	NIC	ENSG00000280145.3	novel	785	4	NA	NA	-39	8131	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	32.2628096868343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTGCCTCATGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	6670734	6659172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_6659579_6666428_6666527_6668151_6668255_6670521
transcript_61630.known	chr21	-	897	3	FSM	ENSG00000278878.1	ENST00000623225.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6670667	6667303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6667963_6668151_6668244_6670521
transcript_61631.known	chr21	-	936	3	FSM	ENSG00000280145.3	ENST00000623324.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	41.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6670695	6667303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6667963_6668151_6668255_6670521
transcript_61632.nic	chr21	-	1495	2	ISM	ENSG00000280145.3	ENST00000623313.1	596	4	-80	34797	-27	354	5prime_fragment	FALSE	canonical	3	52	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTATTTTTCATTGTAT	NA	False	NA	NA	False	AAAACA	-5	NA	6670722	6666949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_6668244_6670521
transcript_61633.known	chr21	-	674	2	FSM	ENSG00000278878.1	ENST00000624181.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATATTTATTAAAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	6670650	6667709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6668255_6670521
transcript_61634.nic	chr21	-	1504	2	ISM	ENSG00000280018.4	ENST00000624519.1	681	3	-61	863	-36	354	5prime_fragment	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTATTTTTCATTGTAT	NA	False	NA	NA	False	AAAACA	-5	NA	6997801	6994019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_6995314_6997591
transcript_61635.nic	chr21	-	1482	2	NIC	ENSG00000280018.4	novel	936	3	NA	NA	-3	354	intron_retention	FALSE	canonical	3	100	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTATTTTTCATTGTAT	NA	False	NA	NA	False	AAAACA	-5	NA	6997768	6994019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_6995325_6997591
transcript_61636.known	chr21	-	936	3	FSM	ENSG00000280018.4	ENST00000624728.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	42	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6997765	6994373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6995033_6995221_6995325_6997591
transcript_61637.nnic	chr21	+	2032	2	NIC	ENSG00000277067.4	novel	2247	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048881	7087097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_7049061_7085244
transcript_61638.nnic	chr21	+	2086	2	NIC	ENSG00000277067.4	novel	859	3	NA	NA	-9	54	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCACTCAATATCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	7048881	7087151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_7049061_7085244
transcript_61639.known	chr21	+	994	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAGGAAAAAGCGTCT	NA	False	NA	NA	False	NA	NA	NA	7430729	7467742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7430839_7462826_7462992_7467022
transcript_61640.known	chr21	+	843	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	24	3	4	-2	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744974	7758627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
transcript_61643.known	chr21	+	153	1	FSM	ENSG00000278189.1	ENST00000619471.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	NA	False	NA	NA	False	GGGGCT	-19	NA	8439822	8439975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_8439800_8440000
transcript_61645.known	chr21	+	812	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	4	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_2	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	14026570	True	NA	NA	False	NA	NA	NA	14027418	14089046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14088608
transcript_61648.known	chr21	+	1332	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	14.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	14026572	True	NA	NA	False	AATAAA	-27	NA	14027420	14144468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14143508
transcript_61649.known	chr21	+	1084	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	14026572	True	NA	NA	False	AATAAA	-27	NA	14027420	14144468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14143756
transcript_6165.known	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.9410574038719	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-113905031	False	NA	-2	True	ATTAAA	-20	NA	113905070	113894747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
transcript_61650.known	chr21	+	553	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	25	0	19	0	multi-exon	FALSE	canonical	0	0	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	14026591	True	NA	NA	False	AAAAAG	-20	NA	14027439	14088783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14088583
transcript_61652.known	chr21	+	1992	5	FSM	ENSG00000185272.14	ENST00000468643.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.92442890089805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	14215740	True	NA	NA	False	AATAAA	-18	NA	14216129	14228372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226879
transcript_61657.known	chr21	+	1955	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.54835134966506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	14215767	True	NA	NA	False	AATAAA	-18	NA	14216156	14228372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_61663.nnic	chr21	+	1130	5	NNC	ENSG00000185272.14	novel	1992	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCTTTTGAAATAT	14215763	True	NA	3	True	AATAAA	-13	NA	14216152	14227384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_14216432_14219552_14219726_14221096_14221170_14224437_14224538_14226879
transcript_61665.known	chr21	+	1597	4	FSM	ENSG00000185272.14	ENST00000495055.1	1597	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.12825877028341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTATAGCTCATTA	14215763	True	NA	NA	False	AATAAA	-13	NA	14216152	14228173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14216283_14221096_14221170_14224437_14224538_14226879
transcript_61666.known	chr21	-	3945	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_4	14.5150783669948	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTTTTCATTCAG	-14379773	True	NA	-2	True	AATAAA	-27	NA	14383146	14371114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
transcript_6167.known	chr1	-	3173	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.5767364435763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGAATCCAGAATGGGAA	-113904760	False	NA	NA	False	AATAAA	-19	NA	113904799	113894193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
transcript_61673.nnic	chr21	-	214	3	NNC	ENSG00000155307.19	novel	450	2	NA	NA	-523	-356	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTACAAGTGTAAACGATG	-14616369	True	NA	-4	True	AATAAA	-23	NA	14616539	14612860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_14612914_14615975_14616017_14616419
transcript_61674.nnic	chr21	-	595	2	Genic_Genomic	ENSG00000226580.1	novel	146	1	NA	NA	-11752	227	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTCAAAGCACCG	-17512480	True	NA	NA	False	AATAAA	-18	NA	17512576	17500451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr21_-_17500805_17512334
transcript_61677.known	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_7	375.103305498523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	17481591	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
transcript_6168.nic	chr1	-	2203	10	NIC	ENSG00000134262.13	novel	2742	11	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_8	30.6340406157014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGCTTGTCTAGAGT	-113905028	True	NA	-8	True	AATAAA	-13	NA	113905068	113895059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113904604_113904794_113904941
transcript_61683.known	chr21	+	5593	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_6	86.3243238542237	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	17481504	True	NA	2	True	AATAAA	-15	NA	17513042	17570100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
transcript_61689.known	chr21	+	1080	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_4	450.09721172209	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	17481507	True	NA	NA	False	AATATA	-24	NA	17513045	17565852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
transcript_61691.known	chr21	+	270	3	FSM	ENSG00000154639.19	ENST00000356275.10	270	3	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_2	609.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATCCCTGGGGTCCA	17481591	False	NA	NA	False	NA	NA	NA	17513129	17565487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17565427
transcript_61692.known	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	23.0908531674341	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612901	17593652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
transcript_61694.known	chr21	-	1593	5	FSM	ENSG00000154642.11	ENST00000400559.7	1593	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	55.8854855933095	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGTTTTAATTTCT	-17816025	True	NA	0	True	GATAAA	-19	NA	17819386	17792803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17793579_17795207_17795271_17796581_17797119_17818191_17818326_17819302
transcript_61698.known	chr21	-	1090	4	FSM	ENSG00000154642.11	ENST00000400558.7	1090	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	54.6260011349907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTAGGGCTAATCATT	-17816025	True	NA	-17	True	AATAAA	-19	NA	17819386	17793246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17793582_17796581_17797119_17818191_17818326_17819302
transcript_61700.nic	chr21	+	2077	5	ISM	ENSG00000154645.14	ENST00000543733.5	1637	6	10632	-533	5	0	3prime_fragment	FALSE	canonical	3	12	junction_4	1.6583123951777	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTAGTCCTGTCTAA	NA	False	NA	8	True	AATAAA	-21	NA	18256506	18267370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_18256819_18256969_18257128_18260199_18260287_18262790_18262894_18265953
transcript_61709.known	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	25.9939896899264	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	-23384898	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_61721.nnic	chr21	-	952	4	NIC	ENSG00000228592.2	novel	1784	5	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	137.589566787925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGTGTGTGTTTATGT	-23381622	True	NA	NA	False	AATAAA	-13	NA	23384873	23361732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_23362240_23372326_23372449_23372947_23373085_23384687
transcript_61724.known	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	14.7044966667418	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	-23381595	True	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
transcript_61740.known	chr21	-	1074	10	FSM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_1	95.5496122182698	1141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	-25603904	True	NA	NA	False	AATAAA	-20	NA	25607481	25585655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_61756.known	chr21	+	4351	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8.20568908339411	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	25639185	True	NA	20	True	AATAAA	-5	NA	25639257	25717562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
transcript_61758.known	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	43.7275515599959	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	NA	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_61762.known	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	22.6323269290239	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	25734256	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_6177.known	chr1	-	2418	7	FSM	ENSG00000081019.14	ENST00000615321.1	2418	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.39266853573691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAAGCATATCTTTT	-113810044	True	NA	NA	False	TATAAA	-18	NA	113812289	113765847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_61772.known	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	3051.77672635139	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708768	True	NA	-6	True	AATAAA	-38	NA	25734904	25724479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
transcript_61776.known	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	2932.40481516451	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708897	True	NA	-6	True	AATAAA	-38	NA	25735033	25724479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
transcript_61777.known	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	2896.89331679454	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25735655	False	NA	-6	True	AATAAA	-38	NA	25735673	25724479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
transcript_61778.known	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2929.13369824974	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25734173	True	NA	-6	True	AATAAA	-38	NA	25735646	25724479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
transcript_61779.known	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	2928.66640109264	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25734166	True	NA	-6	True	AATAAA	-38	NA	25735639	25724479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
transcript_61781.known	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	5795	junction_1	434.822824710121	4449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-25708768	True	NA	-26	True	AATAAA	-18	NA	25734904	25724499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
transcript_61783.known	chr21	-	3099	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	122.817841628251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTTCATTGTCTT	-26568791	True	NA	-12	True	AATAAA	-24	NA	26573286	26466215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
transcript_61785.known	chr21	-	735	4	FSM	ENSG00000166265.13	ENST00000400043.3	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	157.726204403566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCACCCTGGAA	-26568681	True	NA	NA	False	NA	NA	NA	26573176	26477970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_26478136_26480271_26480430_26566265_26566369_26572867
transcript_61786.known	chr21	-	4042	9	FSM	ENSG00000154734.16	ENST00000678221.1	4042	9	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	59.2282396750064	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGGTATATACCATAAA	-26843053	False	NA	NA	False	AAAACA	-40	NA	26843073	26835794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26842989
transcript_61787.known	chr21	-	1293	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	30.9659310999829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883886	True	NA	-10	True	AATAAA	-17	NA	28885371	28872190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_6179.known	chr1	-	2144	7	FSM	ENSG00000134262.13	ENST00000369567.5	2144	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	34.1829229619443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-113904789	False	NA	-2	True	ATTAAA	-20	NA	113904828	113894747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113904604
transcript_61790.nic	chr21	-	1226	6	NIC	ENSG00000156239.12	novel	1293	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	39.3883231427793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883903	True	NA	-10	True	AATAAA	-17	NA	28885388	28872190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_28872740_28876311_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_61791.known	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	15.4272486205415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883882	True	NA	-10	True	AATAAA	-17	NA	28885367	28872190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_61794.known	chr21	-	4781	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	32.2722791262099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883886	True	NA	-10	True	AATAAA	-17	NA	28885371	28872190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_61797.nic	chr21	-	1673	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	78	5567	6	11	5prime_fragment	FALSE	canonical	3	93	junction_6	12.1360599297006	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGTTAGATTTGCTG	-28988238	True	NA	NA	False	AGTAAA	-9	NA	28992871	28966883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_61799.known	chr21	-	1789	6	FSM	ENSG00000156253.7	ENST00000486719.5	1789	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	42.5788679981044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018215	True	NA	0	True	AATAAA	-16	NA	29019350	29005758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29009594_29009693_29019210
transcript_61801.known	chr21	-	3065	5	FSM	ENSG00000156253.7	ENST00000493196.2	3065	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	23.092206477511	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGTTTTATAAGTTT	-29018214	True	NA	NA	False	CATAAA	-15	NA	29019349	29004383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29019210
transcript_61803.known	chr21	-	1787	4	FSM	ENSG00000156253.7	ENST00000472184.1	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	12.2836838484589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018224	True	NA	0	True	AATAAA	-16	NA	29019359	29005758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29006652_29007760_29008124_29008239_29008622_29019210
transcript_61804.known	chr21	-	1625	4	FSM	ENSG00000156253.7	ENST00000286777.6	1625	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	44.1537717024894	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018217	True	NA	0	True	AATAAA	-16	NA	29019352	29005758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29006652_29007760_29008124_29008394_29008622_29019210
transcript_61808.nnic	chr21	-	1262	3	NIC	ENSG00000156253.7	novel	1625	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	58	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018217	True	NA	0	True	AATAAA	-16	NA	29019352	29005758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_29006652_29008394_29008622_29019210
transcript_6181.known	chr1	-	6621	7	FSM	ENSG00000081019.14	ENST00000261441.9	6621	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.39266853573691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTTCATCACAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	113812476	113761831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_61810.known	chr21	+	2924	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.9483762813663	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022593	True	NA	7	True	AATAAA	-17	NA	29024667	29054488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_61815.nnic	chr21	+	2079	13	NNC	ENSG00000156256.15	novel	2960	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.8168063082381	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022562	True	NA	7	True	AATAAA	-17	NA	29024636	29054488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_29024778_29027872_29027890_29039145_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_61817.known	chr21	+	2960	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	19.6206232860092	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29024534	False	NA	7	True	AATAAA	-17	NA	29024628	29054488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_6182.known	chr1	+	3755	4	FSM	ENSG00000118655.7	ENST00000650450.2	3755	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	14.522013940528	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	113903502	True	NA	21	True	AATGAA	-15	NA	113905325	113914086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113905776_113906995_113907162_113908008_113908192_113911130
transcript_61824.known	chr21	-	636	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTTGAGACG	-29024866	True	NA	NA	False	AATAAA	-16	NA	29024890	29024254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29024300_29024900
transcript_61826.known	chr21	-	1862	16	FSM	ENSG00000156261.13	ENST00000626972.2	1862	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	1105.80984903473	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTATTGTCTAATGA	-29043403	False	NA	-19	True	AATAAA	-16	NA	29073351	29056328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29071951_29071989_29073259
transcript_61833.known	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	858.206367004666	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	-29043691	True	NA	-14	True	AATAAA	-21	NA	29073639	29056323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
transcript_6184.known	chr1	+	1960	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACTTAATCTGTTTAA	113903509	True	NA	4	True	ATTAAA	-18	NA	113905332	113912464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113905776_113908008_113908192_113911130
transcript_61840.known	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2789	junction_9	253.92233265392	5300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-29043700	True	NA	-16	True	AATAAA	-19	NA	29073648	29056325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
transcript_61842.known	chr21	-	4160	13	FSM	ENSG00000156299.14	ENST00000636887.1	4160	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	15.0302934842345	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAATGCTTGTCAAAC	-31160812	True	NA	-42	True	NA	NA	NA	31160909	31118457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31160444
transcript_61846.known	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	6377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634500	True	NA	60	True	ATTAAA	-22	NA	31659692	31668931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_61853.known	chr21	+	865	5	FSM	ENSG00000142168.15	ENST00000389995.4	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634473	True	NA	60	True	ATTAAA	-22	NA	31659665	31668931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_31659785_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_61863.known	chr21	-	1546	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1311	junction_1	7.0178344238091	605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTAAGATTGATTTTT	-32269316	True	NA	-22	True	AATAAA	-13	NA	32279049	32268227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
transcript_61869.known	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_27	28.5947421701682	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	-32386812	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
transcript_61870.known	chr21	+	831	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGTACATATTTTAA	32392801	True	NA	NA	False	AATAAA	-24	NA	32393129	32393960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_32393100_32394000
transcript_61872.known	chr21	-	4781	8	FSM	ENSG00000265590.10	ENST00000673807.1	4781	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	492.281237024661	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGAGCAAACATATA	-32612478	False	NA	NA	False	NA	NA	NA	32612865	32573784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_61879.nic	chr21	-	1356	7	NIC	ENSG00000159079.19	novel	3516	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	64	junction_6	373.333816963972	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTGTAAATCGTTTT	-32609960	True	NA	84	True	AATAAA	-14	NA	32612586	32601671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32609955_32612104
transcript_61880.known	chr21	-	3516	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_5	74.62796616104	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCGACCATCAAACTG	-32602602	True	NA	NA	False	AATAAA	-19	NA	32612377	32599353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_61885.known	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	390.038664750048	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32602577	True	NA	89	True	AATAAA	-19	NA	32612352	32601666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_61890.known	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	430.379646358886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	-32612216	False	NA	-29	True	TTTAAA	-12	NA	32612603	32601784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
transcript_61893.known	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_3	73.8816621361485	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32609960	True	NA	89	True	AATAAA	-19	NA	32612586	32601666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_61898.known	chr21	+	1941	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	6.7515430335097	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCATGATACTACCTG	33265866	True	NA	9	True	ATTAAA	-24	NA	33266366	33297221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_61901.known	chr21	+	786	6	FSM	ENSG00000243646.10	ENST00000422891.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	16.0573970493352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGATGTTTTTGACA	33265881	True	NA	NA	False	NA	NA	NA	33266381	33296239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33266515_33268393_33268518_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_61903.known	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_10	14.5481957644238	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	33322288	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
transcript_61908.known	chr21	+	1397	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	57.1297256737292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	33322293	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
transcript_6192.nnic	chr1	-	1918	5	Antisense	novelGene_ENSG00000282048.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	21.4650879336657	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114033415	False	NA	-16	True	ATTAAA	-24	NA	114033426	114014903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_61920.nnic	chr21	-	1086	9	NIC	ENSG00000142188.17	novel	3062	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	58.4636639289739	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	-33478335	True	NA	-3	True	AATAAA	-45	NA	33479951	33432484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_33432803_33439213_33439298_33448781_33448880_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_61921.known	chr21	-	3062	9	FSM	ENSG00000142188.17	ENST00000420455.5	3062	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	39.5371660592916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	-33478327	True	NA	-3	True	AATAAA	-45	NA	33479943	33432484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33432803_33439213_33439298_33448781_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_61923.nnic	chr21	-	1086	8	NIC	ENSG00000142188.17	novel	3062	9	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	64.8546255018067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	NA	False	NA	-3	True	AATAAA	-45	NA	33480009	33432484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_33432803_33439213_33439298_33448781_33448880_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_61925.known	chr21	-	982	8	FSM	ENSG00000142188.17	ENST00000442441.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	69.2216198384668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGTTACATCATCTTG	-33478320	True	NA	54	True	NA	NA	NA	33479936	33450546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33450864_33455726_33455785_33456003_33456098_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_61927.known	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	26.9799308128592	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-33478358	True	NA	-6	True	AATAAA	-17	NA	33479974	33449140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_61934.known	chr21	-	695	4	FSM	ENSG00000142188.17	ENST00000484377.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.4388208363422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	NA	False	NA	-3	True	AATAAA	-45	NA	33448964	33432484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33432803_33436882_33436993_33439213_33439298_33448781
transcript_61935.known	chr21	-	1485	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATAACTGAA	-33491468	True	NA	NA	False	NA	NA	NA	33491716	33488054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33489425_33491601
transcript_61936.nnic	chr21	-	1326	2	NNC	ENSG00000177692.12	novel	1485	2	NA	NA	-36	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTATCATAAATCAT	NA	False	NA	-34	True	ATTAAA	-16	NA	33491752	33488226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_33489425_33491624
transcript_6194.nnic	chr1	-	592	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	36	junction_4	39.9593543491383	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114031521	True	NA	-16	True	ATTAAA	-24	NA	114032279	114014903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
transcript_61940.known	chr21	-	3318	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_10	319.837402001112	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-33529099	True	NA	-9	True	AATAGA	-43	NA	33542117	33503932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_61953.known	chr21	-	2149	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_10	114.359127313914	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTTTTGATTTCTT	-33529096	True	NA	-4	True	AATAAA	-15	NA	33542114	33524008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_61962.nic	chr21	+	1242	3	ISM	ENSG00000159140.21	ENST00000381679.8	7860	5	-861	9472	-834	2545	5prime_fragment	FALSE	canonical	3	1046	junction_2	53.5	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAGAAGAAAGAAA	33542137	True	NA	NA	False	CATAAA	-18	NA	33542203	33549584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_33543170_33546212_33546380_33549475
transcript_61964.known	chr21	+	2463	11	FSM	ENSG00000159140.21	ENST00000381692.6	2463	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	327.268146937645	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33504163	True	NA	-19	True	AATAAA	-1	NA	33543051	33577481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33543170_33546212_33546380_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
transcript_61967.known	chr21	+	3913	29	FSM	ENSG00000205726.15	ENST00000399353.5	3913	29	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	71.6206969715729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTCCTCAAAGAGACC	NA	False	NA	NA	False	NA	NA	NA	33642399	33837018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750253_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_61971.nic	chr21	+	931	6	NIC	ENSG00000205726.15	novel	827	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	135.982940106471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTCACTTGGCCAC	33630891	True	NA	NA	False	AATATA	-17	NA	33642481	33735626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33735305
transcript_61977.known	chr21	-	1482	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	97.9731751835958	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTAACGTATTAATT	-33638850	True	NA	-27	True	GATAAA	-26	NA	33641747	33589466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_61992.known	chr21	-	1685	12	FSM	ENSG00000205758.12	ENST00000290244.9	1685	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	125.005520539252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATTTTGAAGTCTTAA	NA	False	NA	-45	True	NA	NA	NA	33641918	33589385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_61998.nic	chr21	-	1943	12	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	95.022833271668	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACGTAATTAGTAT	-33638844	True	NA	NA	False	NA	NA	NA	33641741	33594642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62.known	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00163_+_0_500
transcript_6200.known	chr1	+	1934	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	199.486006192581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972795	True	NA	19	True	ATTAAA	-18	NA	113979440	113982254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
transcript_62000.known	chr21	-	2558	12	FSM	ENSG00000205758.12	ENST00000420072.5	2558	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	114.952020174283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33642338	33594661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599286_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62020.known	chr21	-	627	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	114.465016489756	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTGGTTTTTGGAA	-33638825	True	NA	NA	False	AATAAA	-13	NA	33641722	33616286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62021.known	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2325.2310923117	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	-33868946	True	NA	31	True	AATAAA	-18	NA	33915814	33903454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_6203.known	chr1	+	2119	1	FSM	ENSG00000282048.1	ENST00000632517.1	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGACTCACCTGGAA	114029064	True	NA	27	True	AATAAA	-16	NA	114032392	114034511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_114032400_114034500
transcript_62036.known	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	4445	junction_6	387.616505783172	4599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868936	True	NA	-32	True	AATAAA	-20	NA	33915804	33903452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_6204.known	chr1	+	1748	3	FSM	ENSG00000116774.12	ENST00000320334.5	1748	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	23.5	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	113972828	True	NA	18	True	ATTAAA	-17	NA	113979473	113982253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113979631_113980331_113980618_113980948
transcript_62048.known	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2087.32991163352	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868893	True	NA	-32	True	AATAAA	-20	NA	33915761	33903452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
transcript_6205.known	chr1	+	2063	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972845	True	NA	19	True	ATTAAA	-18	NA	113979490	113982254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113979631_113980331
transcript_62054.known	chr21	+	728	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	33930657	True	NA	5	True	ATTAAA	-16	NA	33931162	33938372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33931743_33938224
transcript_62056.known	chr21	+	207	2	FSM	ENSG00000237945.8	ENST00000622171.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCGTGATCCTGGGGG	33930717	True	NA	-66	True	NA	NA	NA	33931222	33938301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33931353_33938224
transcript_62057.known	chr21	-	591	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	0	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTATTTGGTAATACG	NA	False	NA	-14	True	AATAAA	-18	NA	33968573	33967100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33967351_33968232
transcript_62058.known	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	373.093151907134	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	34051334	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_62060.known	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	22	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	34051363	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34073746_34125340_34125481_34142407
transcript_62062.known	chr21	+	11566	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	34051363	True	NA	12	True	AATAAA	-13	NA	34073577	34106260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34073746_34094862
transcript_62063.known	chr21	-	2643	3	FSM	ENSG00000225555.2	ENST00000440403.2	2643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAGTTCTATATAAAAA	NA	False	NA	NA	False	AAAACA	-16	NA	34375364	34353098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_34354888_34370434_34371161_34375236
transcript_62065.known	chr21	+	1220	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	88.3130086680326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375479	34402777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
transcript_62067.known	chr21	+	840	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	34375506	34389151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
transcript_62068.known	chr21	+	1074	4	FSM	ENSG00000205670.12	ENST00000399295.2	1074	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.4445906431483	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	34375603	34389153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34375897_34379427_34379517_34385477_34385645_34388628
transcript_62070.known	chr21	-	3184	3	FSM	ENSG00000180509.13	ENST00000432085.5	3184	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGTGTGTTCTTAATA	NA	False	NA	NA	False	ATTAAA	-17	NA	34459604	34446687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_34449685_34458653_34458765_34459528
transcript_62071.known	chr21	-	2408	4	FSM	ENSG00000159200.18	ENST00000381132.6	2408	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	19.5675468285856	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATTTTATTTCTAGA	-34526899	True	NA	-1	True	AATAAA	-28	NA	34526963	34516483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34526662
transcript_62072.known	chr21	+	2632	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGGAGATAGCAGAA	34745689	True	NA	NA	False	NA	NA	NA	34745756	34784886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34746017_34782124_34782191_34782580
transcript_62080.known	chr21	-	2991	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_5	95.8969832943596	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-36057237	True	NA	-14	True	ATTAAA	-17	NA	36060526	36034540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_6209.nic	chr1	-	3072	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-2	266	combination_of_known_junctions	TRUE	canonical	3	341	junction_2	61.5739144344057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTCAGATTTCTCT	-114146977	True	NA	-2	True	AATAAA	-18	NA	114152924	114090507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_6210.nic	chr1	-	2484	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-2	-322	combination_of_known_junctions	FALSE	canonical	3	341	junction_2	61.5739144344057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTTTCCAAATGGGGA	-114146977	True	NA	-32	True	ATTAAA	-18	NA	114152924	114091095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_62107.nic	chr21	-	1514	7	ISM	ENSG00000185917.14	ENST00000332131.9	2991	12	-301	9145	-301	0	5prime_fragment	FALSE	canonical	3	300	junction_5	41.7119753654618	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	-36060813	False	NA	-9	True	AATAAA	-15	NA	36060827	36043685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_6211.known	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	134.614187929195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114152327	True	NA	16	True	NA	NA	NA	114153850	114091764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_6212.nic	chr1	-	1909	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_2	61.5739144344057	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114151495	False	NA	16	True	NA	NA	NA	114153018	114091764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_62120.known	chr21	+	1208	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	18	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	36047298	True	NA	31	True	AATAAA	-17	NA	36070023	36073164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36070405_36070949_36071058_36072445
transcript_62122.known	chr21	+	1024	2	FSM	ENSG00000159228.13	ENST00000439427.2	1024	2	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAAGTCGTTTGGGACAC	36047289	True	NA	NA	False	NA	NA	NA	36070014	36071583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36070405_36070949
transcript_62123.nnic	chr21	+	787	2	FSM	ENSG00000233393.2	ENST00000685204.1	502	2	-285	0	-274	0	multi-exon	FALSE	canonical	3	81	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATCTATCTTTTCCTTT	36104556	False	NA	22	True	ATTAAA	-16	NA	36104606	36107851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36105124_36107581
transcript_62124.known	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	36102794	True	NA	2	True	AGTAAA	-15	NA	36104880	36109690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36105124_36107597
transcript_62125.known	chr21	+	998	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	36133845	True	NA	NA	False	AATAAA	-20	NA	36135078	36146562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36135482_36137824_36137933_36146075
transcript_62126.known	chr21	-	741	3	FSM	ENSG00000236830.8	ENST00000427491.2	752	3	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGCTTTGTGTTAGA	-36156191	True	NA	NA	False	AATAAA	-29	NA	36156306	36141395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_36141947_36146255_36146356_36156216
transcript_62128.known	chr21	+	4224	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	21.4810963407364	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	36318407	True	NA	11	True	AATAAA	-22	NA	36320196	36376632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_62130.known	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	24.0876112919376	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	36381484	True	NA	15	True	AATAAA	-17	NA	36385391	36419015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_62134.nic	chr21	+	2156	12	NIC	ENSG00000159259.8	novel	4466	14	NA	NA	-40	-2188	combination_of_known_junctions	FALSE	canonical	1	5	junction_8	62.8784738947984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTTTTCTGATT	36381444	True	NA	28	True	ATTAAA	-13	NA	36385351	36416827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_62142.known	chr21	-	972	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	59.4252471597721	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071489	True	NA	-4	True	AATAAA	-21	NA	37073170	37065373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
transcript_62143.nnic	chr21	-	945	6	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	68.2952414154896	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	NA	False	NA	-4	True	AATAAA	-21	NA	37073204	37065373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37073060
transcript_62148.known	chr21	-	656	5	FSM	ENSG00000185808.14	ENST00000399103.5	656	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	68.2362623536782	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071330	True	NA	-4	True	AATAAA	-21	NA	37073011	37065373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072990
transcript_62149.nnic	chr21	-	779	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	63.4167761716094	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	NA	False	NA	-4	True	AATAAA	-21	NA	37073204	37065373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073060
transcript_6215.nic	chr1	-	1794	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_2	143.091807264156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114146977	True	NA	16	True	NA	NA	NA	114152924	114091764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_114092083_114093734_114093804_114097747_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_62150.nnic	chr21	-	753	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	61.8238424881534	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	NA	False	NA	-4	True	AATAAA	-21	NA	37073214	37065373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073096
transcript_62162.known	chr21	-	3056	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	29.849281261644	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	-37262913	True	NA	NA	False	AATAAA	-20	NA	37267334	37223421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_62169.known	chr21	-	937	7	FSM	ENSG00000157538.14	ENST00000476950.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	94.0703046780557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGCCAGCGGCATAT	-37262925	True	NA	-73	True	NA	NA	NA	37267346	37225471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37238459_37238610_37240495_37240640_37267237
transcript_62171.nic	chr21	-	977	7	NIC	ENSG00000157538.14	novel	555	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	139.799161498042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTGGTGGTTTTTTGT	-37262944	True	NA	NA	False	AATAAA	-23	NA	37267365	37230517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_37230819_37231492_37231591_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_62174.known	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	115.67194992737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-37262930	True	NA	-20	True	NA	NA	NA	37267351	37225298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
transcript_62177.nic	chr21	-	1244	2	ISM	ENSG00000157538.14	ENST00000475009.1	715	3	-41	1398	-41	-1247	5prime_fragment	FALSE	canonical	3	282	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGCTCTTCTGAGAAG	-37267284	False	NA	NA	False	AAAAAG	-1	NA	37267444	37239602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_37240640_37267237
transcript_62178.known	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-37262919	True	NA	-7	True	ATTAAA	-18	NA	37267340	37261081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37261938_37267237
transcript_62181.known	chr21	-	760	6	FSM	ENSG00000183527.12	ENST00000431628.1	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	346.513260929506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-39183373	False	NA	NA	False	AAGAAA	-43	NA	39183385	39175589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39183251
transcript_62185.known	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	80.745828925641	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-39173930	True	NA	NA	False	NA	NA	NA	39183451	39174768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
transcript_62189.known	chr21	-	1552	8	FSM	ENSG00000205581.11	ENST00000431390.5	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	2443.93363916721	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39255565	True	NA	-2	True	AATAAA	-19	NA	39349140	39342314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62190.known	chr21	-	745	7	FSM	ENSG00000205581.11	ENST00000485550.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	2525.21711387798	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGTACAACCAGAAAATA	-39348543	False	93575	NA	False	NA	NA	NA	39348597	39342908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347484_39348291_39348340_39348421_39348452_39348544
transcript_62193.known	chr21	-	1303	7	FSM	ENSG00000205581.11	ENST00000288344.14	1303	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	2272.36814799011	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39348937	False	NA	-2	True	AATAAA	-19	NA	39348991	39342314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62194.known	chr21	-	793	7	FSM	ENSG00000205581.11	ENST00000482192.5	793	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	2557.49398283207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATACAAAGCATATTAA	-39348569	False	93575	-53	True	NA	NA	NA	39348623	39342803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39347246_39347293_39347378_39347484_39348291_39348340_39348421_39348452_39348544
transcript_62198.known	chr21	-	1014	6	FSM	ENSG00000205581.11	ENST00000489072.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	2424.77631133266	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAGCATATTAAATGG	-39348808	False	NA	-49	True	NA	NA	NA	39348862	39342799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544
transcript_6220.known	chr1	-	8369	20	FSM	ENSG00000197323.12	ENST00000358465.7	8369	20	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	16.6940864013465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAATGAATTTCTTT	-114508872	True	NA	NA	False	ATTAAA	-17	NA	114511203	114392789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_62204.known	chr21	-	1271	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	4768	junction_5	422.739446941021	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39255513	True	NA	-2	True	AATAAA	-19	NA	39349088	39342314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62208.nic	chr21	-	1174	5	ISM	ENSG00000205581.11	ENST00000380749.10	1271	6	422	0	-43	0	3prime_fragment	FALSE	canonical	3	4797	junction_4	422.658254385266	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39348612	False	NA	-2	True	AATAAA	-19	NA	39348666	39342314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544
transcript_62210.known	chr21	+	1328	9	FSM	ENSG00000285815.1	ENST00000647779.1	1328	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.76759534992	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	39376234	True	NA	NA	False	AATAAA	-17	NA	39380331	39515506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62212.nnic	chr21	+	1238	4	NIC	ENSG00000182093.16	novel	1534	5	NA	NA	-18	-53	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	161.365699232795	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAACCAATAACCTGTGT	39376210	True	NA	3	True	AAAACA	-22	NA	39380307	39397690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_39380487_39390697_39390864_39391768_39391837_39396865
transcript_62214.nnic	chr21	+	1437	4	NIC	ENSG00000182093.16	novel	1534	5	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	161.365699232795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39376210	True	NA	5	True	AGTAAA	-18	NA	39380307	39397889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_39380487_39390697_39390864_39391768_39391837_39396865
transcript_62219.known	chr21	+	1534	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	55.5939520091889	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39376228	True	NA	5	True	AGTAAA	-18	NA	39380325	39397889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_62221.known	chr21	+	1437	5	FSM	ENSG00000182093.16	ENST00000649822.1	1437	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	166.31502487749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGCAAGTTCATATT	39380401	False	NA	4	True	AGTAAA	-17	NA	39380477	39397888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39380487_39390697_39390920_39391768_39391837_39393165_39393281_39396865
transcript_62224.known	chr21	+	699	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	171.03855559493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTCATTGAGCCAAG	39380230	False	NA	NA	False	NA	NA	NA	39380457	39397116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_6223.known	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	49.4887753827965	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	-114575492	True	NA	-4	True	AATAAA	-23	NA	114581615	114567556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
transcript_62230.known	chr21	+	1464	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	105.831233574971	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39386609	True	NA	5	True	AGTAAA	-18	NA	39387764	39397889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_62233.known	chr21	+	1416	5	FSM	ENSG00000182093.16	ENST00000466787.1	1416	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	167.840698282627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATTGCCAACTGGAAA	39386635	True	NA	NA	False	NA	NA	NA	39387790	39397254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39387856_39390697_39391477_39391768_39391837_39393165_39393281_39396865
transcript_62238.known	chr21	+	816	7	FSM	ENSG00000185437.15	ENST00000380634.5	816	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.8394724940223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAATGATTTCAAGG	39445603	True	NA	NA	False	NA	NA	NA	39445864	39515355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39445893_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62239.known	chr21	+	1014	7	FSM	ENSG00000185437.15	ENST00000380637.7	1014	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	15.4784796841723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	39445593	True	NA	NA	False	AATAAA	-17	NA	39445854	39515506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39445930_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62240.known	chr21	+	780	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.9700509722291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTACATGGAGGTATCT	39445680	False	NA	NA	False	NA	NA	NA	39445941	39515207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62241.known	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.47381587925744	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	39451766	True	NA	NA	False	AATAAA	-15	NA	39451969	39515504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62243.known	chr21	-	3846	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	96.8744892459654	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGAGGCCTCTCCA	-39611081	True	NA	NA	False	NA	NA	NA	39612857	39597202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
transcript_62245.known	chr21	-	1071	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-39612403	False	NA	NA	False	ATTAAA	-18	NA	39612441	39597146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39597990_39609582_39609666_39612296
transcript_62246.nic	chr21	-	2000	3	ISM	ENSG00000184809.13	ENST00000489821.5	1919	4	-449	1719	16	-1705	5prime_fragment	FALSE	canonical	3	13	junction_1	108.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCATGTTTTCTTCGCTTT	-39611065	True	NA	-2	True	AATAAA	-23	NA	39612841	39598907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_39600280_39609582_39609666_39612296
transcript_62247.nnic	chr21	-	950	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	16	30	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	114.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTGATACATGCGT	-39611065	True	NA	-12	True	AATAAA	-20	NA	39612841	39602812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_39603135_39609582_39609666_39612296
transcript_62248.nnic	chr21	-	1713	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	16	33	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	110.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAATGTTTGACATTTC	-39611065	True	NA	-7	True	ATTAAA	-19	NA	39612841	39604100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_39605186_39609582_39609666_39612296
transcript_62249.known	chr21	-	1823	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	91.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGCGCGGT	-39612466	False	NA	NA	False	AATACA	-1	NA	39612504	39604470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39606003_39609582_39609666_39612296
transcript_62250.known	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	68	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	-39612872	False	NA	-42	True	NA	NA	NA	39612910	39602842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39606348_39609582_39609666_39612296
transcript_62251.known	chr21	-	3106	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	106.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTATTAAAGTTCT	-39611100	True	NA	-40	True	NA	NA	NA	39612876	39604133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39606577_39609582_39609666_39612296
transcript_62254.known	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	39867313	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39867511_39898475_39898528_39928983
transcript_62255.known	chr21	+	1013	6	FSM	ENSG00000182240.16	ENST00000463674.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	7.19444229944198	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCAGGCCTGACCTCAA	NA	False	NA	NA	False	NA	NA	NA	41241744	41275624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
transcript_62257.known	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.22335585688414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	41316509	True	NA	NA	False	NA	NA	NA	41316800	41357727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_62261.known	chr21	+	864	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.31245915016974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGATGTGATTCAAGC	41316522	True	NA	95	True	ACTAAA	-20	NA	41316813	41357431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_62264.known	chr21	+	3509	14	FSM	ENSG00000183486.14	ENST00000680862.1	3509	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	2.67134697756698	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTGTATGTTTCAA	41370383	False	NA	NA	False	NA	NA	NA	41370451	41409329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41370646_41376835_41377156_41377788_41377982_41380016_41380152_41382409_41382565_41390564_41390704_41395586_41395786_41397612_41397692_41398896_41399020_41399195_41399338_41401969_41402129_41403266_41403344_41406743_41406999_41407990
transcript_62265.known	chr21	+	2776	17	FSM	ENSG00000157601.15	ENST00000398598.8	2776	17	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	4.27017271313468	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTCTGCCATGTTTTG	41425992	True	NA	16	True	AATAAA	-16	NA	41426238	41459212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_62268.known	chr21	+	588	2	FSM	ENSG00000237232.9	ENST00000675770.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGCCAAATTAACAGC	NA	False	NA	-8	True	ATTAAA	-3	NA	42009358	42011582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42009585_42011220
transcript_62269.known	chr21	-	867	3	FSM	ENSG00000160180.17	ENST00000518498.3	867	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGTATTTGTTTGCT	-42315380	True	NA	NA	False	AGTAAA	-20	NA	42315409	42311666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42312270_42313484_42313632_42315292
transcript_62270.known	chr21	-	419	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGAGGTTGTGCTT	-42313373	True	NA	-1	True	AATAAA	-40	NA	42313686	42312052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42312270_42313484
transcript_62272.nic	chr21	+	2964	20	NIC	ENSG00000160190.14	novel	481	5	NA	NA	294	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	42.8726129577876	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42514310	True	NA	6	True	AATAAA	-19	NA	42514817	42581426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_62275.known	chr21	-	1300	9	FSM	ENSG00000160188.10	ENST00000291536.8	1300	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.21834929310112	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGCTTCAAGTTCT	-42496170	True	NA	3	True	AATAAA	-28	NA	42496224	42472485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42472871_42475897_42476048_42477290_42477445_42482636_42482709_42485668_42485805_42486370_42486462_42492757_42492864_42492965_42493080_42496132
transcript_62277.known	chr21	+	449	3	FSM	ENSG00000239930.2	ENST00000416179.1	449	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGAGATTCCAAAATTATG	42496520	True	NA	NA	False	AATAAA	-20	NA	42496538	42497443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42496666_42496822_42496934_42497232
transcript_62278.known	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	35.2823985214917	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652377	True	NA	18	True	AATATA	-15	NA	42653620	42775509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_6228.known	chr1	-	891	6	FSM	ENSG00000116752.6	ENST00000485021.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	262.827243641142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAATATTGTGTCATAG	-114575506	True	NA	-109	True	CATAAA	-37	NA	114581629	114567883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114581298_114581392_114581498
transcript_62280.known	chr21	+	1883	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	37.2379734500505	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652766	True	NA	18	True	AATATA	-15	NA	42653749	42775509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62283.known	chr21	+	1776	18	FSM	ENSG00000160191.18	ENST00000398236.7	1776	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	56.1742223141109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62284.known	chr21	+	1885	18	FSM	ENSG00000160191.18	ENST00000398232.7	1885	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	50.6221500543445	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62285.known	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	53.0871556381579	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62287.known	chr21	+	1616	16	FSM	ENSG00000160191.18	ENST00000349112.7	1616	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.8847182830184	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42698967_42699012_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62290.nnic	chr21	+	864	5	NNC	ENSG00000160191.18	novel	794	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.3173896981625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATTTCATGTATTTAA	42652795	True	NA	4	True	AATAAA	-15	NA	42653778	42701193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700627
transcript_62291.known	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.7380940108002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	42652795	True	NA	0	True	AATAAA	-11	NA	42653778	42701189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
transcript_62294.known	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	60.2767721116381	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-42874548	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_62295.known	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_8	50.2335545228486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	-42874556	True	NA	-1	True	AATATA	-14	NA	42879539	42849225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_62297.nnic	chr21	+	1692	5	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-62	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.924957237226	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCGCTGTGCATAAT	42884913	True	NA	11	True	AATAAA	-17	NA	42893205	42909100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_42893382_42896926_42897048_42903181_42904277_42906839_42906903_42908863
transcript_62302.nnic	chr21	+	597	4	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-62	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	230.236110692191	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCGCTGTGCATAAT	42884913	True	NA	11	True	AATAAA	-17	NA	42893205	42909100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_42893382_42896926_42897048_42906839_42906903_42908863
transcript_62304.known	chr21	+	4676	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	148	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGGCACTATGCCTC	42884975	True	NA	82	True	AATAAA	-22	NA	42893267	42913304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42893382_42896926_42897048_42908863
transcript_62310.known	chr21	-	2790	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	133	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	-42925633	False	NA	-7	True	ATTAAA	-17	NA	42925646	42916802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42919292_42925345
transcript_62312.known	chr21	+	5300	11	FSM	ENSG00000160199.15	ENST00000291547.10	5300	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	34.0992668542888	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	42971915	True	NA	NA	False	NA	NA	NA	42974561	43033931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_62315.nic	chr21	+	1195	10	ISM	ENSG00000160199.15	ENST00000291547.10	5300	11	-30	5150	-3	0	5prime_fragment	FALSE	canonical	3	152	junction_5	35.6432945228755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGAACCGGCCAGTT	42974431	False	NA	NA	False	AAGAAA	-5	NA	42974531	43028781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701
transcript_62316.known	chr21	+	5180	10	FSM	ENSG00000160199.15	ENST00000432907.6	5180	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	71.5502068394315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	42974409	False	NA	NA	False	NA	NA	NA	42974509	43033931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_62334.nic	chr21	-	2319	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	860	junction_1	371.543437503015	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075781	False	NA	NA	False	TATAAA	-14	NA	43075873	43053190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_62352.known	chr21	-	2453	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_16	525.313950027743	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075739	False	NA	NA	False	TATAAA	-14	NA	43075831	43053190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
transcript_62353.known	chr21	-	2495	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	0	0	0	multi-exon	FALSE	canonical	3	1625	junction_13	236.173524328511	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075743	False	NA	NA	False	TATAAA	-14	NA	43075835	43053190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_62354.known	chr21	-	2583	17	FSM	ENSG00000160200.18	ENST00000352178.9	2583	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_16	547.807048603794	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43076286	False	NA	NA	False	TATAAA	-14	NA	43076378	43053190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
transcript_62383.known	chr21	-	966	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_6	1982.79931142186	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101200	False	NA	NA	False	AATAAA	-20	NA	43107524	43092955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
transcript_6239.known	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_3	78.3744572903415	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-114701486	True	NA	-7	True	AATAAA	-28	NA	114716771	114704468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
transcript_62392.known	chr21	-	945	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	3780	junction_6	906.719473752292	2451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101246	True	NA	NA	False	AATAAA	-20	NA	43107570	43092955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
transcript_62393.known	chr21	-	940	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	2363	junction_5	1553.2902799791	2536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101241	True	NA	NA	False	AATAAA	-20	NA	43107565	43092955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
transcript_62409.nic	chr21	+	1083	11	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-39	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	174.018418565392	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATGACCGAAACTTGA	43728500	True	NA	-94	True	AAAACA	-17	NA	43728860	43756144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_62411.known	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	5	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	-43748016	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43774331_43774657_43774760_43776203
transcript_62413.known	chr21	-	1855	2	FSM	ENSG00000160213.9	ENST00000639959.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCTGGTTTAAATA	-43776218	False	NA	-6	True	AATAAA	-14	NA	43776238	43772510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43774331_43776203
transcript_62414.known	chr21	-	2354	2	FSM	ENSG00000160213.9	ENST00000640406.1	2354	2	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTAATGCTGTGGTCT	-43748026	True	NA	-16	True	AATAAA	-4	NA	43776318	43772520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43774760_43776203
transcript_62417.nnic	chr21	+	1770	13	NNC	ENSG00000160214.13	novel	2958	13	NA	NA	7	-1194	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	145.232835092099	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAGTGTCGCTTCAGGT	NA	False	NA	20	True	AATAAA	-21	NA	43789519	43804099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798050_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_62418.known	chr21	+	2958	13	FSM	ENSG00000160214.13	ENST00000497547.2	2958	13	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_7	48.9701581464558	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCGTGTCTAACGTAA	43785040	True	NA	NA	False	NA	NA	NA	43789576	43805293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_62430.known	chr21	+	3188	21	FSM	ENSG00000241945.8	ENST00000291576.12	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	98.1088171368914	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	44102907	True	NA	89	True	ATTAAA	-16	NA	44107398	44131181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010_44126120_44126899_44126966_44127931_44128151_44128246_44128398_44128551_44128627_44130596
transcript_62434.known	chr21	+	1584	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	305.749716089629	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	44128396	True	NA	NA	False	AATAAA	-17	NA	44133682	44145711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_62435.known	chr21	+	1077	6	FSM	ENSG00000160221.18	ENST00000427803.6	1077	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	316.825125266289	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	NA	False	NA	NA	False	ATTAAA	-19	NA	44133617	44141417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44140941
transcript_62436.known	chr21	+	694	6	FSM	ENSG00000160221.18	ENST00000389690.7	694	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	315.244032457396	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	44128492	False	NA	NA	False	ATTAAA	-19	NA	44133778	44141417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44141163
transcript_62438.known	chr21	+	1506	6	FSM	ENSG00000160221.18	ENST00000348499.9	1506	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	406.78957705428	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	44128393	True	NA	NA	False	AATAAA	-29	NA	44133679	44145723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44143204_44143362_44144820
transcript_6244.known	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	2	593	junction_15	817.583104622392	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	-114716275	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_62444.known	chr21	+	807	5	FSM	ENSG00000160221.18	ENST00000480786.1	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_4	54.1589097009901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	44128387	True	NA	NA	False	NA	NA	NA	44133673	44140604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249
transcript_62447.known	chr21	+	2907	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_11	84.8875473294521	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	44287018	True	NA	40	True	AATAAA	-37	NA	44300052	44327373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_62449.known	chr21	-	1634	7	FSM	ENSG00000160226.16	ENST00000397956.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5675468285856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339366	False	NA	-12	True	AATAAA	-17	NA	44339393	44329890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44330327_44330462_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_62450.known	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	11.5674351329738	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339375	False	NA	-12	True	AATAAA	-17	NA	44339402	44329890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_62454.known	chr21	+	912	2	FSM	ENSG00000228709.2	ENST00000449713.2	1856	2	91	853	91	-853	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGTAGAAGAGGGTG	44482931	False	NA	NA	False	TTTAAA	-16	NA	44485576	44490288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44486231_44490030
transcript_62456.known	chr21	+	2422	2	FSM	ENSG00000182912.6	ENST00000354333.5	2422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGCTTCTTGTCTAAT	44517544	True	NA	4	True	CATAAA	-16	NA	44517616	44520830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44517836_44518627
transcript_62457.known	chr21	-	1150	1	FSM	ENSG00000241123.1	ENST00000400372.1	1150	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTTTCTGTAGTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	44580604	44579454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44579500_44580600
transcript_62459.known	chr21	-	744	7	FSM	ENSG00000184787.19	ENST00000491513.5	744	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	256.862479419111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACTTGCAAGAACCAT	-44792592	True	NA	-26	True	NA	NA	NA	44801823	44771278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44779143_44779217_44787919_44787966_44788059_44788096_44801705
transcript_62460.known	chr21	-	721	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	241.281301941669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGTACCAAACAAGGCA	-44792543	True	NA	-42	True	NA	NA	NA	44801774	44771294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_62463.known	chr21	-	3367	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	34.9536836399256	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTTCTGTTTTGGT	-44792589	True	NA	1	True	AATAAA	-24	NA	44801820	44768579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
transcript_62467.known	chr21	-	424	5	FSM	ENSG00000184787.19	ENST00000490450.5	424	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	268.73255757351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAATATTATCAGCCAC	-44792537	True	NA	NA	False	NA	NA	NA	44801768	44777253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_62470.known	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	234.311758134328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	-44792588	True	NA	NA	False	NA	NA	NA	44801819	44770930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
transcript_62472.known	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	26.1278905896872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-44792570	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
transcript_62475.known	chr21	-	1512	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGTTTCCCCATC	-44792577	True	NA	NA	False	AATAAA	-18	NA	44801808	44799989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44801399_44801705
transcript_62476.known	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_3	7.36357401145817	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806171	True	NA	-34	True	AGTAAA	-20	NA	44818062	44805616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
transcript_62477.known	chr21	-	1736	4	FSM	ENSG00000184900.16	ENST00000479153.1	1736	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	610.482504981829	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	NA	False	NA	-34	True	AGTAAA	-20	NA	44818779	44805616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44818668
transcript_62482.known	chr21	-	2600	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_2	33.2686038180144	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTAGTATGCTGCG	-44865416	True	NA	-15	True	AATAAA	-16	NA	44873690	44849597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
transcript_62484.known	chr21	-	2413	4	FSM	ENSG00000183255.12	ENST00000397887.7	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	435.836615666416	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCGTGTTCCTGTGTTC	-44865435	True	NA	-2	True	AATAAA	-29	NA	44873709	44849584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44851628_44861162_44861272_44865394_44865448_44873501
transcript_62485.known	chr21	+	892	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	69.8896272704326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44928300	True	NA	-12	True	AATAAA	-42	NA	44940028	44976973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_62486.known	chr21	+	880	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	72.9492974606336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGCTGGGCACACC	44928283	True	NA	4	True	NA	NA	NA	44940011	44976989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_62488.known	chr21	+	443	1	FSM	ENSG00000276529.1	ENST00000616815.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGTCTGGTTGTGG	44978812	True	NA	34	True	AATAAA	-36	NA	44978831	44979274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44978800_44979300
transcript_62489.known	chr21	-	598	2	FSM	ENSG00000186866.17	ENST00000476653.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCCAAAATGTTTCTC	-45286035	True	NA	NA	False	NA	NA	NA	45287892	45285482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_45285929_45287740
transcript_6249.known	chr1	-	3774	20	FSM	ENSG00000009307.17	ENST00000369530.5	3774	20	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_17	993.441071948862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTGTGCCTGAAA	-114716294	True	NA	24	True	TTTAAA	-18	NA	114758003	114717311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
transcript_62490.known	chr21	+	7540	3	FSM	ENSG00000223768.3	ENST00000400362.3	7540	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAACTATATATTACA	45287114	True	NA	NA	False	TATAAA	-45	NA	45288049	45297806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_45288166_45289350_45289439_45290470
transcript_62492.known	chr21	+	389	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	17	74	2	-74	multi-exon	FALSE	canonical	2	6	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	45287116	True	NA	NA	False	NA	NA	NA	45288051	45290578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_45288245_45289350_45289439_45290470
transcript_62494.known	chr21	-	4991	6	FSM	ENSG00000173638.19	ENST00000311124.9	4991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.7891502493096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTTCCTTTTATT	-45536776	True	NA	-21	True	AATACA	-1	NA	45542440	45512564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_62495.known	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.871683995112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-45536807	True	NA	-5	True	ATTAAA	-15	NA	45542471	45514714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_62497.known	chr21	+	4203	35	FSM	ENSG00000142156.16	ENST00000361866.8	4203	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	173.44610413054	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	45972977	True	NA	22	True	AATAAA	-15	NA	45981769	46005048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_62498.known	chr21	+	3445	28	FSM	ENSG00000142173.16	ENST00000300527.9	3445	28	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	51.6856861315745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	46092894	True	NA	14	True	AATAAA	-14	NA	46098111	46132848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46131953
transcript_62499.nic	chr21	+	1256	5	ISM	ENSG00000142173.16	ENST00000310645.9	3446	28	-5	15364	2	1492	5prime_fragment	FALSE	canonical	3	275	junction_1	71.0892924426738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGCCACATTTAAG	46092896	True	NA	NA	False	AAAAAG	-1	NA	46098113	46114441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007
transcript_62501.known	chr21	-	4886	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	0	0	0	0	multi-exon	TRUE	canonical	3	282	junction_21	55.9636665416868	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	-46227347	False	NA	-1	True	ATTAAA	-17	NA	46228774	46188445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_62502.known	chr21	+	2373	3	FSM	ENSG00000215424.10	ENST00000455567.2	2373	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAAACACTT	46228284	True	NA	NA	False	TTTAAA	-7	NA	46229195	46251701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46229267_46240833_46241020_46249585
transcript_62503.known	chr21	+	2386	3	FSM	ENSG00000215424.10	ENST00000656253.1	2386	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGACTTTCAGGAAA	46228312	True	NA	NA	False	AAAACA	-44	NA	46229223	46251745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46229267_46240836_46241020_46249585
transcript_62504.known	chr21	+	2424	3	FSM	ENSG00000215424.10	ENST00000662666.1	2424	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAATTCTATATTTGAA	46228354	True	NA	NA	False	TTTAAA	-31	NA	46229265	46251725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46229364_46240833_46241020_46249585
transcript_62506.known	chr21	+	534	5	FSM	ENSG00000182362.14	ENST00000397694.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	125.636380081567	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46284190	True	NA	9	True	AATAAA	-16	NA	46286383	46297723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46286989_46291333_46291463_46296161_46296231_46297538
transcript_62507.known	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	26.6364412037344	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284148	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_62512.known	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.592527167609	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46285826	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_62515.known	chr21	+	433	4	FSM	ENSG00000182362.14	ENST00000397692.5	433	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	137.528178930719	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46286989_46296161_46296231_46297538
transcript_62517.nic	chr21	+	636	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	106.887271875041	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46286209	False	NA	9	True	AATAAA	-16	NA	46286287	46297723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
transcript_6252.known	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_18	1034.68266143613	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	-114716273	True	NA	-9	True	AATAAA	-45	NA	114757982	114717956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
transcript_62521.known	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	120.932488052908	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
transcript_62522.known	chr21	+	912	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAAGGCTGGAGT	46284161	True	NA	NA	False	NA	NA	NA	46286354	46291930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46287124_46291333
transcript_62524.known	chr21	+	1402	3	FSM	ENSG00000182362.14	ENST00000492864.1	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTTGTACTATTGACG	46284260	False	NA	NA	False	AAAACA	-16	NA	46286453	46292197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286738_46286869_46287124_46291333
transcript_62529.known	chr21	-	1109	3	FSM	ENSG00000160307.10	ENST00000291700.9	1109	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGAGGCAGGTGGATCAC	-46604928	True	NA	NA	False	AATAAA	-18	NA	46605082	46598603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_46599504_46602277_46602417_46605012
transcript_62530.known	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_11	196.111454227791	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627855	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_62531.known	chr21	+	2131	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	193.920499174275	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	46627796	True	NA	24	True	AATAAA	-24	NA	46635614	46664951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_62532.nic	chr21	+	1581	9	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-58	3854	1	0	5prime_fragment	FALSE	canonical	3	246	junction_8	191.738061883915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	46627797	True	NA	3	True	AATAAA	-16	NA	46635615	46661270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_62535.known	chr21	+	1932	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	244.17450214959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627862	True	NA	NA	False	ATTAAA	-16	NA	46635680	46665124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
transcript_6254.known	chr1	-	4006	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	0	0	0	multi-exon	FALSE	canonical	2	2104	junction_7	396.732553662795	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	-114716274	True	NA	0	True	AATAAA	-28	NA	114757983	114716912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_62540.nic	chr21	+	2338	8	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-29	4980	3	714	5prime_fragment	FALSE	canonical	3	263	junction_1	184.183803493651	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	46627826	True	NA	39	True	ATTAAA	-21	NA	46635644	46660144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_62543.nic	chr21	+	1472	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	1	3681	1	0	5prime_fragment	FALSE	canonical	3	246	junction_7	164.18344643	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	46627797	True	NA	3	True	AATAAA	-16	NA	46635615	46661270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_62544.known	chr21	+	1874	8	FSM	ENSG00000160310.19	ENST00000458387.6	1874	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	248.170859510548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	46635561	False	NA	NA	False	ATTAAA	-9	NA	46635594	46665117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46663382_46663555_46664294
transcript_62545.nic	chr21	+	1119	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-61	15236	-2	0	5prime_fragment	FALSE	canonical	3	263	junction_1	188.620135604753	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	46627794	True	NA	NA	False	NA	NA	NA	46635612	46649888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_62546.known	chr21	+	1334	7	FSM	ENSG00000160310.19	ENST00000334494.8	1334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	243.96339661697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTCATACATTAGCA	46627834	True	NA	NA	False	AATAAA	-16	NA	46635652	46652318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46651805
transcript_62547.nic	chr21	+	1156	7	NIC	ENSG00000160310.19	novel	1011	7	NA	NA	1	190	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	232.132445431961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAACCACATTATGACGA	46627797	True	NA	NA	False	AATAAA	-16	NA	46635615	46653142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46652844
transcript_62549.nic	chr21	+	2258	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	1	4807	1	714	5prime_fragment	FALSE	canonical	3	357	junction_6	128.025605077873	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	46627797	True	NA	39	True	ATTAAA	-21	NA	46635615	46660144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_62550.known	chr21	+	1011	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	234.908315448106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	46627823	True	NA	NA	False	NA	NA	NA	46635641	46664473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
transcript_62553.known	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	93.3372380135603	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	46627855	True	NA	NA	False	NA	NA	NA	46635673	46649893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_62560.known	chr22	+	1175	4	FSM	ENSG00000235478.6	ENST00000441544.3	1231	4	55	1	9	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATGCACTCAGTCTTTT	17121555	False	NA	NA	False	ATTAAA	-20	NA	17121594	17132104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17122040_17124654_17124772_17130361_17130485_17131614
transcript_62563.nic	chr22	-	2214	8	NIC	ENSG00000069998.12	novel	1735	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_7	419.31640189475	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	-17159004	False	11363	-12	True	AATAAA	-28	NA	17159025	17137521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17158456
transcript_62569.known	chr22	+	339	2	FSM	ENSG00000185837.4	ENST00000329743.4	379	2	32	8	27	-8	multi-exon	FALSE	canonical	2	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATATGTCCCTTGTCT	17159207	True	NA	2	True	AATAAA	-14	NA	17159383	17165439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17159552_17165268
transcript_62570.known	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	6.52346193026031	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	-17199750	False	NA	-4	True	AATAAA	-13	NA	17199783	17179305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
transcript_62571.known	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	147.116502494188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	-17622583	True	NA	42	True	NA	NA	NA	17628749	17592408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
transcript_62572.known	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	30.5509308368829	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	-17622583	True	NA	1	True	NA	NA	NA	17628749	17592135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_62573.known	chr22	-	1208	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	148.379271339582	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGATTTCTAGTGT	-17622581	True	NA	31	True	ATTAAA	-14	NA	17628747	17592168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_62577.known	chr22	+	4959	7	FSM	ENSG00000099968.18	ENST00000317582.10	4959	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	44.6371170912977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	17634856	True	NA	NA	False	NA	NA	NA	17638756	17730855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_62580.known	chr22	+	2112	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	36.7532311504717	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	17634871	True	NA	-23	True	AATAAA	-24	NA	17638771	17703733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
transcript_62582.nic	chr22	+	771	5	ISM	ENSG00000099968.18	ENST00000418951.6	5062	6	154	28427	-3	0	5prime_fragment	FALSE	canonical	3	29	junction_4	101.539093456658	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTTTGTTGTTTTTCTT	17634837	True	NA	NA	False	ATTAAA	-21	NA	17638737	17702428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17702242
transcript_62583.nic	chr22	+	2108	5	ISM	ENSG00000099968.18	ENST00000418951.6	5062	6	154	27090	-3	32	5prime_fragment	FALSE	canonical	3	29	junction_4	101.539093456658	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATTGCGACAATTTAT	17634837	True	NA	9	True	AATAAA	-27	NA	17638737	17703765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17702242
transcript_62585.known	chr22	+	4905	5	FSM	ENSG00000099968.18	ENST00000337612.9	4905	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	103.448054597465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	17638479	False	NA	NA	False	NA	NA	NA	17638583	17730855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17702242_17702387_17726676
transcript_62588.known	chr22	-	2495	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	170.168622254516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17774005	False	3587	-6	True	AATAAA	-18	NA	17774016	17734137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
transcript_62589.known	chr22	-	2177	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	70.4630399571293	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17770882	True	NA	-6	True	AATAAA	-18	NA	17774469	17734137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
transcript_62593.known	chr22	-	700	6	FSM	ENSG00000015475.19	ENST00000551952.5	700	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	180.504404378397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCGATGTGGTCACAG	-17774654	False	NA	NA	False	NA	NA	NA	17774665	17735551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774639
transcript_62595.known	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	174.52363736755	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-17770908	True	NA	-25	True	AATATA	-27	NA	17774495	17735363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
transcript_62597.known	chr22	-	1988	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.501118922629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTTTTCATGTTTTGGA	-17770908	True	NA	-10	True	AATAAA	-14	NA	17774495	17734141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
transcript_62598.known	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	196.832133781273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	-17770902	True	NA	-43	True	AAAAAG	-23	NA	17774489	17734174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
transcript_62602.known	chr22	+	2003	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTGTCAAGTGAGAGAA	18110727	True	NA	NA	False	AATAAA	-19	NA	18110808	18131732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_62603.known	chr22	+	1518	5	FSM	ENSG00000183785.16	ENST00000316027.10	1518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.34477204006491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCTTTATTTATG	18110605	True	NA	16	True	AATATA	-14	NA	18110686	18131154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18110840_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_62604.known	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	16.0872620417522	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18150150	False	NA	NA	False	AATAAA	-17	NA	18150169	18177397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_62606.nnic	chr22	+	1601	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	14449	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	20.1271468622934	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	NA	False	NA	NA	False	AATAAA	-17	NA	18164618	18177397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18164921_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_62607.nnic	chr22	+	1350	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	15400	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	21.684189669726	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18165503	True	NA	NA	False	AATAAA	-17	NA	18165569	18177397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18165621_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_62608.nnic	chr22	+	1521	7	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	14449	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.4432449200637	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	NA	False	NA	NA	False	AATAAA	-17	NA	18164618	18177397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18164921_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_62609.nnic	chr22	+	1269	7	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	15401	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.7857485933617	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18165504	True	NA	NA	False	AATAAA	-17	NA	18165570	18177397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18165621_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_62610.known	chr22	+	1334	9	FSM	ENSG00000278558.5	ENST00000612978.5	1334	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.5039890231424	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	18527801	18530573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18528277_18528558_18528683_18528816_18528868_18529018_18529094_18529440_18529498_18529605_18529725_18529935_18530009_18530155_18530197_18530254
transcript_62611.known	chr22	-	1787	4	FSM	ENSG00000274602.5	ENST00000619742.4	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	66.4646940529749	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	18537865	18533656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649
transcript_62614.nnic	chr22	+	1118	3	NNC	ENSG00000284294.1	novel	1214	2	NA	NA	-533	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	4	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	18938900	False	NA	0	True	NA	NA	NA	18938912	18947741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18939003_18939672_18939750_18946790
transcript_62615.nnic	chr22	+	1326	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	40	16	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	9.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	18939473	False	NA	16	True	NA	NA	NA	18939485	18947757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18939750_18945071_18945167_18946790
transcript_62617.known	chr22	+	1837	2	FSM	ENSG00000183628.14	ENST00000608842.1	1837	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	18905762	True	NA	NA	False	NA	NA	NA	18906352	18908269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18906485_18906564
transcript_62618.nic	chr22	+	1245	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3045	0	10	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	18939443	False	NA	0	True	NA	NA	NA	18939455	18947741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_18939750_18946790
transcript_62619.known	chr22	+	1117	5	FSM	ENSG00000183628.14	ENST00000331444.12	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	30.6675724503913	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTGTGATAGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	18906319	18912088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18906485_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_62620.known	chr22	+	1435	5	FSM	ENSG00000183628.14	ENST00000480608.5	1435	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.4596094566727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTTGTGTGATAGCT	18905764	True	NA	NA	False	AATAAA	-21	NA	18906354	18912087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18906485_18906564_18907087_18910178_18910273_18910887_18911029_18911539
transcript_62621.known	chr22	+	1199	6	FSM	ENSG00000183628.14	ENST00000427407.5	1199	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	59.5012604908501	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCATGTGGCTTGTGTGA	18905760	True	NA	NA	False	AATAAA	-16	NA	18906350	18912082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18906485_18906564_18906726_18909979_18910099_18910171_18910273_18910887_18911029_18911539
transcript_62623.known	chr22	-	4438	10	FSM	ENSG00000070413.20	ENST00000263196.12	4438	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	154.24511517567	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	-19119053	True	NA	-6	True	AATAAA	-15	NA	19122412	19036285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_62631.known	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	12.1655250605964	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	-19141737	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_62636.known	chr22	+	1445	1	FSM	ENSG00000260924.2	ENST00000565162.2	1445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCGACCAAGATAGTGT	NA	False	NA	28	True	AATAAA	-25	NA	19171394	19172839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19171400_19172800
transcript_62639.known	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	744.236930940006	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	-19178502	False	NA	-20	True	AATAAA	-4	NA	19178521	19175592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
transcript_62640.known	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_8	187.358238076152	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-19167078	True	NA	-8	True	AATAAA	-16	NA	19178736	19175580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
transcript_62645.nnic	chr22	-	1277	7	NIC	ENSG00000100075.10	novel	1514	9	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_5	1045.61328362301	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-19178492	False	NA	-8	True	AATAAA	-16	NA	19178511	19175580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19178132_19178241_19178386
transcript_62647.nnic	chr22	-	1202	6	NIC	ENSG00000100075.10	novel	1548	9	NA	NA	190	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_5	911.0224146529	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-19178271	False	NA	-8	True	AATAAA	-16	NA	19178290	19175580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19178132
transcript_62651.known	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	20.237478982214	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	19429329	True	NA	31	True	AATAAA	-18	NA	19432544	19436075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
transcript_62652.known	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	179.755389348971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	19429363	True	NA	23	True	AATAAA	-10	NA	19432578	19436067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
transcript_62654.known	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	14.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441374	True	NA	NA	False	AATAAA	-15	NA	19447692	19440885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19441695_19447377_19447546_19447664
transcript_62656.known	chr22	-	3720	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441393	True	NA	NA	False	AATAAA	-15	NA	19447711	19440885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19444391_19447377_19447546_19447664
transcript_62661.nic	chr22	-	931	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	322.149187125208	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466208	True	NA	-5	True	AATAAA	-17	NA	19479209	19450620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
transcript_62663.nic	chr22	-	809	9	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_8	337.789042895118	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466208	True	NA	-5	True	AATAAA	-17	NA	19479209	19450620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
transcript_62665.known	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_10	103.828370778475	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-19466192	True	NA	-18	True	ATTAAA	-14	NA	19479193	19449910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_62666.known	chr22	-	1007	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	276.077004469214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466171	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_62669.known	chr22	+	2072	20	FSM	ENSG00000093009.11	ENST00000437685.6	2072	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	62.8090806286661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCTCTGGTCTCGAG	NA	False	NA	24	True	AATAAA	-25	NA	19479825	19520611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19494506_19494603_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_62670.known	chr22	+	1879	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_12	18.4176512222164	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	19474885	True	NA	21	True	AATAAA	-22	NA	19479919	19520608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_62678.known	chr22	+	1693	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	45.838893444859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	19474903	True	NA	-9	True	NA	NA	NA	19479937	19520578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_62684.nic	chr22	+	1160	12	ISM	ENSG00000093009.11	ENST00000263201.7	1879	19	-47	12735	-28	2503	5prime_fragment	FALSE	canonical	3	198	junction_3	10.6460717156708	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCTGGATTTATCTT	19474838	True	NA	8	True	AATAAA	-15	NA	19479872	19507873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765
transcript_62688.nnic	chr22	+	783	8	NNC	ENSG00000093009.11	novel	1879	19	NA	NA	-28	385	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	70.552339812803	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCCCATCAGTGTGTG	19474838	True	NA	NA	False	GATAAA	-15	NA	19479872	19496371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19496275
transcript_62690.known	chr22	+	2031	12	FSM	ENSG00000184702.20	ENST00000455784.7	2031	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	42.4774125684745	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGTCCGAGTGCT	19713981	True	NA	11	True	NA	NA	NA	19714502	19723319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427
transcript_62695.nic	chr22	-	1606	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	4	0	combination_of_known_splicesites	TRUE	canonical	3	48	junction_7	48.5588218933848	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851257	True	NA	-9	True	AATAAA	-14	NA	19854870	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
transcript_62696.nic	chr22	-	1563	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	58.3703866769471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851236	True	NA	-9	True	AATAAA	-14	NA	19854849	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854681
transcript_62697.known	chr22	-	6642	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	31.1113864581272	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATAACAGCCATTCTG	-19851261	True	NA	NA	False	AATAAA	-15	NA	19854874	19783222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_62701.nic	chr22	-	1367	7	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	60.0872051457065	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851304	True	NA	-9	True	AATAAA	-14	NA	19854917	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19821227_19821376_19854442_19854540_19854819
transcript_62708.nic	chr22	-	1332	6	NIC	ENSG00000185838.14	novel	1197	6	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	68.3473481563111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851257	True	NA	-9	True	AATAAA	-14	NA	19854870	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854659
transcript_62709.known	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	76.9051363694259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	-19851193	True	NA	-58	True	NA	NA	NA	19854806	19788463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
transcript_62710.nic	chr22	-	1284	6	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	57.8909319323847	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-9	True	AATAAA	-14	NA	19854982	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854819
transcript_62714.nnic	chr22	-	1121	5	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	75.7495874576225	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-9	True	AATAAA	-14	NA	19854982	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19854442_19854540_19854819
transcript_6272.known	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_17	789.970924960999	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	-114716265	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
transcript_62720.known	chr22	-	6653	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-19851261	True	NA	-7	True	AATAAA	-16	NA	19854874	19846145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442_19854540_19854659
transcript_62721.known	chr22	-	730	3	FSM	ENSG00000215012.9	ENST00000416337.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	26	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGTGGACTTCTGCTG	-19851203	True	NA	NA	False	NA	NA	NA	19854816	19851988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442_19854540_19854681
transcript_62722.known	chr22	-	6523	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	57	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGCTTGTGTTTTCC	-19851283	True	NA	1	True	AATAAA	-24	NA	19854896	19846137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442_19854540_19854819
transcript_62724.known	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	32.4602320796797	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851230	True	NA	-9	True	AATAAA	-14	NA	19854843	19788414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
transcript_62726.known	chr22	+	2202	7	FSM	ENSG00000093010.15	ENST00000678769.1	2202	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	126.947167488421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTGGCAGAAAGCAAAAA	19940513	True	NA	NA	False	NA	NA	NA	19941833	19969874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19966625_19966719_19968535
transcript_62729.known	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	23.2999761564017	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19881294	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_6273.known	chr1	-	3459	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	0	0	0	multi-exon	FALSE	canonical	2	115	junction_16	790.308021069058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCCTGAAATGAATCT	-114716318	True	NA	31	True	AATAAA	-4	NA	114758027	114717304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
transcript_62731.nic	chr22	-	1090	7	NIC	ENSG00000184470.21	novel	1129	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	36.2050487578122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	19881399	19875521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_62732.known	chr22	+	1548	6	FSM	ENSG00000093010.15	ENST00000403710.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	125.811605188075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTATATACTAATATC	19940452	True	NA	19	True	NA	NA	NA	19941772	19968958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19941898_19961198_19961290_19962232_19962816_19963565_19963760_19964167_19964300_19968535
transcript_62734.known	chr22	+	2272	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	97.3118697795906	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCTCAGTGTTTTT	19940451	True	NA	NA	False	NA	NA	NA	19941771	19969975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_62738.known	chr22	+	909	4	FSM	ENSG00000093010.15	ENST00000677675.1	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	144.907633415988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	19963113	True	NA	25	True	TATAAA	-34	NA	19963137	19969029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19963227_19963565_19963760_19964167_19964300_19968535
transcript_62739.known	chr22	+	2084	8	FSM	ENSG00000183597.16	ENST00000432883.5	2084	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	22.2573079032942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020158	True	NA	11	True	AATAAA	-23	NA	20021068	20065925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_62742.known	chr22	+	2011	7	FSM	ENSG00000183597.16	ENST00000398042.6	2011	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	26.6359197742864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020161	True	NA	12	True	AATAAA	-24	NA	20021071	20065926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20061529_20061684_20063337_20063443_20064541
transcript_62746.known	chr22	-	2928	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	36.3672433501481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	20117392	20111874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
transcript_62748.known	chr22	-	2886	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_9	22.5406886458267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	-20115030	True	NA	-10	True	AATAAA	-15	NA	20117226	20111874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_62755.known	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_1	2968.8534217775	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116091	False	NA	18	True	AATAAA	-21	NA	20116103	20127355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_62758.known	chr22	+	837	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	3733	junction_5	1588.07727771667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	20040276	True	NA	21	True	TATAAA	-12	NA	20117547	20127181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_62760.known	chr22	+	1132	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_5	1771.17741629685	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116974	True	NA	18	True	AATAAA	-21	NA	20117423	20127355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_62768.known	chr22	-	1973	2	FSM	ENSG00000040608.14	ENST00000425986.1	1973	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGGCCTCTCAGGCT	-20243667	True	NA	-8	True	AATAAA	-14	NA	20243684	20241416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20243111_20243405
transcript_62772.known	chr22	-	1172	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	60.1227910197123	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGTAGGGCCCCCA	-20309632	True	NA	NA	False	NA	NA	NA	20320060	20314237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
transcript_62774.known	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	325.111604769125	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	-20309652	True	NA	NA	False	NA	NA	NA	20320080	20314393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
transcript_62779.known	chr22	-	962	4	FSM	ENSG00000128185.10	ENST00000405465.3	962	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	360.078077952855	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAATGTGGCTTGTGTG	-20309581	True	NA	NA	False	AATAAA	-15	NA	20320009	20314282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20314825_20315335_20315477_20319638_20319787_20319878
transcript_62780.nnic	chr22	-	1375	10	Fusion	ENSG00000235578.1_ENSG00000161133.17	novel	920	8	NA	NA	-22	0	multi-exon	FALSE	canonical	2	4	junction_2	15.9094660850423	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCCTTGACTATTGAT	-20372692	True	NA	NA	False	AGTAAA	-15	NA	20372718	20343202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_-_20343516_20344232_20344366_20353494_20353568_20363624_20363675_20364185_20364318_20366566_20366735_20367547_20367644_20369428_20369576_20370119_20370200_20372535
transcript_62781.known	chr22	+	3900	5	FSM	ENSG00000185252.19	ENST00000400451.7	3900	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	47.9374592568275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	20389630	True	NA	30	True	AATAAA	-41	NA	20394150	20408455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_62782.known	chr22	+	2789	4	FSM	ENSG00000185252.19	ENST00000403682.7	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	73.1087470066947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGCGGCAT	20389607	True	NA	NA	False	NA	NA	NA	20394127	20407407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20394663_20400631_20400759_20401276_20401373_20405376
transcript_62783.known	chr22	+	2788	5	FSM	ENSG00000185252.19	ENST00000357502.5	2788	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	93.1299495328973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTCCAGTGAACATTA	20389640	True	NA	19	True	AATAAA	-20	NA	20394160	20407681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20394335_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_62784.known	chr22	-	2528	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	9.24962461700774	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-20494984	True	NA	-7	True	AATAAA	-27	NA	20495795	20441518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_62786.nic	chr22	+	964	8	NIC	ENSG00000226287.9	novel	926	7	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	40.6252158549995	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	7	True	AATAAA	-17	NA	20702323	20704606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_20702461_20702585_20702710_20703005_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_62789.nic	chr22	+	814	7	NIC	ENSG00000226287.9	novel	788	6	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.6720292758776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	7	True	AATAAA	-17	NA	20702782	20704606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_20702894_20703005_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_62790.known	chr22	+	663	7	FSM	ENSG00000226287.9	ENST00000419950.5	663	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.8428222890124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20702696	False	NA	7	True	AATAAA	-17	NA	20703051	20704606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20703123_20703467_20703525_20703632_20703693_20703818_20703884_20703967_20704041_20704187_20704229_20704310
transcript_62791.known	chr22	+	788	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	18.7552659272003	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20702565	True	NA	7	True	AATAAA	-17	NA	20702920	20704606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_62793.nic	chr22	+	682	5	ISM	ENSG00000226287.9	ENST00000452055.5	788	6	451	0	277	0	3prime_fragment	FALSE	canonical	3	74	junction_2	14.6714007511212	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20703016	False	NA	7	True	AATAAA	-17	NA	20703371	20704606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_62796.known	chr22	+	4259	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	12.3768937944866	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	20855579	True	NA	8	True	AATAAA	-19	NA	20859006	20891214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
transcript_62798.known	chr22	+	684	2	FSM	ENSG00000237476.1	ENST00000444039.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGTATGTGTGGAG	20957077	False	NA	NA	False	AATAAA	-15	NA	20957091	20964679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20957487_20964390
transcript_62799.nic	chr22	+	590	3	ISM	ENSG00000183773.16	ENST00000483107.5	1325	11	3891	0	2710	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATGACTCCCAGTG	20979572	False	NA	2	True	ATTAAA	-16	NA	20979582	20981356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_20979703_20980019_20980125_20980991
transcript_628.known	chr1	-	378	3	FSM	ENSG00000226944.1	ENST00000455744.1	378	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTTGAGCTGTTTTCG	-6205729	False	NA	-4	True	AATAAA	-19	NA	6205780	6204839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6204983_6205205_6205414_6205753
transcript_62801.known	chr22	-	1144	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	61.5832769508087	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	NA	False	NA	-31	True	AATAAA	-13	NA	21002196	20999776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
transcript_62802.nnic	chr22	-	1170	4	NNC	ENSG00000184436.12	novel	1144	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	116.000957850451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	-21000276	False	1486	-31	True	AATAAA	-13	NA	21001762	20999776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001545
transcript_62803.nnic	chr22	-	1152	4	NNC	ENSG00000184436.12	novel	1144	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	116.467448957495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	-21000276	False	1486	-31	True	AATAAA	-13	NA	21001762	20999776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001563
transcript_62804.known	chr22	-	1913	4	FSM	ENSG00000184436.12	ENST00000215742.9	1913	4	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_3	46.2673390921357	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-21000632	True	NA	NA	False	NA	NA	NA	21002118	20999103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831
transcript_62805.known	chr22	-	1080	4	FSM	ENSG00000184436.12	ENST00000466670.1	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	66.6949939817242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCACCAGAGCGGCAG	-21000631	True	NA	NA	False	NA	NA	NA	21002117	21000229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21001412_21001831_21001912_21002085
transcript_62806.known	chr22	-	1957	3	FSM	ENSG00000184436.12	ENST00000498406.1	1957	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	20.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-21000256	False	1486	NA	False	NA	NA	NA	21001742	20999103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21000788_21001255
transcript_62807.known	chr22	-	1671	3	FSM	ENSG00000184436.12	ENST00000476667.5	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	56	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCATAATAAAGCGGATT	-21000620	True	NA	-56	True	NA	NA	NA	21002106	20999801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21001412_21001831
transcript_62809.known	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	21001906	False	NA	20	True	ATTAAA	-33	NA	21001921	21003272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21002830_21002917
transcript_62810.known	chr22	+	1020	1	FSM	ENSG00000230513.3	ENST00000662660.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTTTTAAGAATTG	21001729	True	NA	12	True	ATTAAA	-25	NA	21002244	21003264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21002200_21003300
transcript_62811.known	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-21000309	False	1486	-27	True	AATAAA	-17	NA	21001795	20999772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646
transcript_62819.known	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2253	junction_1	216.378269601075	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556578	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
transcript_62823.known	chr22	+	2932	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1357	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567546	21624034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21567772_21610856_21611044_21621514
transcript_62827.nnic	chr22	-	994	3	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	31	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626891	True	NA	-4	True	AATAAA	-20	NA	21630045	21628088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_21628788_21629307_21629408_21629850
transcript_62828.known	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	45	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	21631839	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21642524_21642861_21643059_21643893
transcript_62829.known	chr22	+	2625	21	FSM	ENSG00000100023.20	ENST00000626352.2	2625	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_19	63.328094081537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGAGGGCATCAGGTA	21663955	True	NA	11	True	ATTAAA	-21	NA	21666021	21697866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695397_21695497_21696884
transcript_62830.known	chr22	+	4068	20	FSM	ENSG00000100023.20	ENST00000398831.8	4068	20	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_16	27.0308124173987	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	21663945	True	NA	18	True	ATTAAA	-15	NA	21666011	21697907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_62836.nic	chr22	+	440	2	ISM	ENSG00000100023.20	ENST00000484439.5	863	11	-21	14650	-1	-3381	5prime_fragment	FALSE	canonical	3	222	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATGTACATTTAAATGT	21663941	True	NA	NA	False	AATAAA	-21	NA	21666007	21670228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_21666132_21669912
transcript_62840.nic	chr22	-	2945	19	NIC	ENSG00000100038.20	novel	3061	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_18	41.8417064071451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21977876	True	NA	NA	False	ATTAAA	-16	NA	21982822	21957030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_62843.known	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	41.3565808790683	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977841	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_62845.known	chr22	-	5149	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	9.07114735222145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCCGAGTCCTGC	-21950535	True	NA	-12	True	AATAAA	-15	NA	21952848	21919424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_62848.known	chr22	-	1778	7	FSM	ENSG00000100034.14	ENST00000397495.8	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	7.60847480700888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	-21950518	True	NA	NA	False	AATAAA	-26	NA	21952831	21924875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_62851.nnic	chr22	+	808	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5102	-3056	at_least_one_novel_splicesite	FALSE	canonical	3	177	junction_3	42.6702472455926	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	22296703	True	NA	12	True	ATTAAA	-18	NA	22298121	22307345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
transcript_62852.nnic	chr22	+	1191	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5102	-2673	intron_retention	FALSE	canonical	3	177	junction_3	42.6702472455926	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCGTACATCCTTTTCAG	22296703	True	NA	NA	False	AGTAAA	-18	NA	22298121	22307728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
transcript_62854.nic	chr22	+	765	5	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-2	21777	-2	-21777	5prime_fragment	FALSE	canonical	3	119	junction_3	67.2681202353686	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	22296703	True	NA	12	True	ATTAAA	-18	NA	22298121	22307345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105
transcript_62855.nic	chr22	+	1148	5	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-2	21394	-2	-21394	intron_retention	FALSE	canonical	3	119	junction_3	67.2681202353686	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCGTACATCCTTTTCAG	22296703	True	NA	NA	False	AGTAAA	-18	NA	22298121	22307728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105
transcript_62857.nnic	chr22	+	910	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5084	-3056	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	107.780738075038	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	22296721	True	NA	12	True	ATTAAA	-18	NA	22298139	22307345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_22298212_22303103_22303298_22303942_22304115_22306789_22307022_22307105
transcript_62858.known	chr22	-	5309	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	-22506861	True	NA	NA	False	AATAAA	-18	NA	22508742	22484420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
transcript_62860.known	chr22	-	2148	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTGTCTTTGGCTTTT	NA	False	NA	3	True	AATAAA	-15	NA	22520270	22513735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22515702_22520088
transcript_62861.known	chr22	-	2196	6	FSM	ENSG00000185686.18	ENST00000398743.6	2196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTGTAGTATAT	NA	False	NA	1	True	AATAAA	-19	NA	22559340	22547700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22548644_22549725_22550335_22550766_22551090_22556811_22556931_22557544_22557581_22559174
transcript_62862.known	chr22	-	1188	7	FSM	ENSG00000100218.12	ENST00000216036.9	1188	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.15470053837925	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGGTCCGAATGGCACT	-23141967	True	NA	NA	False	AATAAA	-18	NA	23141990	23059414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23059719_23061808_23061946_23063901_23064134_23134025_23134145_23138839_23138943_23140221_23140473_23141948
transcript_62865.known	chr22	+	1077	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACAGTGATTTTAG	23536130	True	NA	NA	False	AATGAA	-1	NA	23536898	23547167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
transcript_62875.known	chr22	-	2055	10	FSM	ENSG00000228315.12	ENST00000422506.5	2055	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.6138273404802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-23714351	True	NA	0	True	AATAAA	-20	NA	23717356	23638486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23695172_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_62878.nnic	chr22	-	1703	9	NIC	ENSG00000228315.12	novel	2055	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	17.1751091699587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-23714344	True	NA	0	True	AATAAA	-20	NA	23717349	23638486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_23638943_23659864_23660001_23683724_23683868_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_62891.known	chr22	-	567	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGAGGGTCATAAG	-23754366	True	NA	-17	True	NA	NA	NA	23754425	23752742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23753199_23754314
transcript_62895.known	chr22	+	895	6	FSM	ENSG00000169314.15	ENST00000402217.8	895	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.99332590941915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTTGGGTTATCTG	23762829	True	NA	15	True	AATAAA	-15	NA	23762989	23765863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23763332_23764086_23764174_23764259_23764398_23764638_23764714_23764792_23764903_23765720
transcript_62896.known	chr22	+	681	6	FSM	ENSG00000169314.15	ENST00000305199.9	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.66476151587624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	23763046	False	NA	13	True	AATAAA	-13	NA	23763206	23765861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23763332_23764086_23764174_23764259_23764403_23764638_23764714_23764792_23764903_23765720
transcript_62902.known	chr22	-	490	2	FSM	ENSG00000250479.9	ENST00000523865.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACACAAATGTGCAATTA	-23743510	False	NA	-43	True	NA	NA	NA	23766464	23765873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23766027_23766127
transcript_62903.known	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	TRUE	canonical	3	1683	junction_5	202.542433825606	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_62904.known	chr22	+	5191	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	599.709395770151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTCCCACGAAATCTG	NA	False	NA	NA	False	AATAAA	-20	NA	23786965	23838009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_62905.known	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	27.6008252694653	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_62906.nnic	chr22	-	1221	7	NNC	ENSG00000099958.15	novel	3093	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	45.8935967453219	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	NA	False	NA	-5	True	AAGAAA	-29	NA	23839117	23834502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_23834980_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_62908.known	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	35.758448885077	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_62912.nic	chr22	-	1212	6	ISM	ENSG00000099958.15	ENST00000406855.7	1063	7	-31	0	-25	0	intron_retention	FALSE	canonical	3	63	junction_1	30.216551755619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838533	True	NA	-5	True	AAGAAA	-29	NA	23839037	23834502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
transcript_62917.known	chr22	-	969	6	FSM	ENSG00000099958.15	ENST00000476077.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	10.5565145763173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-23838508	True	NA	-15	True	AATAAA	-15	NA	23839012	23836733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_62921.nic	chr22	-	875	6	NIC	ENSG00000099958.15	novel	3093	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_5	56.7097875150313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-23838502	True	NA	-15	True	AATAAA	-15	NA	23839006	23836733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838717_23838894
transcript_62935.known	chr22	+	887	4	FSM	ENSG00000133460.20	ENST00000473740.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6.84754619472471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGACTGCTCGTGGGA	23856856	False	NA	-96	True	NA	NA	NA	23856999	23875211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875116
transcript_62938.known	chr22	+	1048	8	FSM	ENSG00000133460.20	ENST00000405286.6	1048	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.0822527732683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATGGTGTTAAAATGC	23856807	True	NA	7	True	ATTAAA	-15	NA	23856950	23882951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
transcript_62939.known	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_2	2178	12635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	NA	False	NA	16	True	AATAAA	-15	NA	23894382	23895223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23894583_23894771_23894945_23895039
transcript_62940.known	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885406	False	NA	20	True	AATAAA	-19	NA	23894697	23895227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23894945_23895039
transcript_62941.known	chr22	+	742	5	FSM	ENSG00000133460.20	ENST00000423972.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	12.9807549857472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCGAATCCTCTATCCA	23857294	True	NA	NA	False	ATTAAA	-21	NA	23857416	23877287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875120_23875242_23877041
transcript_62947.nnic	chr22	-	1233	6	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.5435491221502	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23961216	23957413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23960690_23960795_23961019
transcript_62948.nnic	chr22	-	1495	6	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.348935244741	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23961216	23957413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_23957933_23958284_23958459_23958550_23958964_23960293_23960382_23960690_23960795_23961019
transcript_62955.known	chr22	-	1108	5	FSM	ENSG00000133433.11	ENST00000290765.9	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	14.7732867026942	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23961195	23957413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23961019
transcript_62956.known	chr22	-	819	5	FSM	ENSG00000133433.11	ENST00000404172.3	819	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	17.6971042829046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAAGCTCTGCACAGA	NA	False	NA	NA	False	NA	NA	NA	23961153	23957618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23957933_23958326_23958459_23958550_23958702_23960293_23960382_23961019
transcript_6296.known	chr1	-	521	5	FSM	ENSG00000009307.17	ENST00000525132.1	521	5	0	0	0	0	multi-exon	FALSE	canonical	1	160	junction_3	1093.78594226658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTTTTTTTTTAAA	-114716260	True	NA	NA	False	AATAAA	-25	NA	114757969	114736757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114736856_114737962_114738073_114739691_114739726_114749973_114750208_114757924
transcript_62964.known	chr22	+	1582	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	430.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGATGCAATTATCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	23966887	23972556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23967023_23967385_23967562_23971285
transcript_62965.known	chr22	-	565	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_2	41	2171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	NA	False	NA	-6	True	AATAAA	-24	NA	23974441	23971369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23971624_23973767_23973944_23974306
transcript_62969.known	chr22	+	7233	37	FSM	ENSG00000099991.18	ENST00000263119.10	7233	37	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.33775523557488	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	24009859	True	NA	13	True	AATAAA	-13	NA	24011303	24178628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
transcript_62972.nic	chr22	+	1655	10	ISM	ENSG00000099991.18	ENST00000398319.6	7480	37	-64	122324	6	0	5prime_fragment	FALSE	canonical	3	21	junction_5	8.68089999316649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	24009909	True	NA	NA	False	NA	NA	NA	24011353	24056304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_62974.known	chr22	+	1321	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	11.1740491765519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	24011191	24056304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_62975.known	chr22	+	1472	9	FSM	ENSG00000099991.18	ENST00000445422.5	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.8397416943394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTTCCAGGAGCTTC	24009971	False	NA	NA	False	AAAAAG	-8	NA	24011415	24056318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_62983.known	chr22	+	2630	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	49.1648474239697	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	24601500	True	NA	25	True	AATAAA	-44	NA	24603192	24628996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_62996.known	chr22	-	1828	5	FSM	ENSG00000178026.13	ENST00000446942.5	1828	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	46.2513513316098	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAACCTCAGGGTCACT	-24591739	True	NA	-2	True	AATAAA	-29	NA	24593066	24585619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_24586412_24588213_24588330_24588678_24589266_24589820_24589950_24592862
transcript_62998.known	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2405	junction_1	51.0968579160098	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	24522077	True	NA	20	True	ATTAAA	-14	NA	24555998	24574971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
transcript_62999.nnic	chr22	+	1159	4	NNC	ENSG00000100028.12	novel	3466	4	NA	NA	-503	-2837	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_1	1125.23251918091	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTCTTT	24555283	True	NA	-16	True	AATAAA	-20	NA	24555454	24572134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_24556058_24557656_24557801_24567983_24568177_24571915
transcript_63.known	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00165_+_0_900
transcript_6300.nic	chr1	-	928	6	NIC	ENSG00000052723.12	novel	5494	5	NA	NA	-21	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	195.053428577916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCAGTCAATATTGGC	-114771670	True	NA	-14	True	ATTAAA	-20	NA	114780655	114774137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_114774373_114776345_114776460_114778931_114779055_114779141_114779285_114780109_114780216_114780448
transcript_63001.nnic	chr22	+	516	3	NIC	ENSG00000100028.12	novel	3466	4	NA	NA	-39	-2837	combination_of_known_splicesites	FALSE	canonical	3	74	junction_2	1165.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTCTTT	24521997	True	NA	-16	True	AATAAA	-20	NA	24555918	24572134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_24556072_24557656_24557801_24571915
transcript_63009.known	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-24695443	True	NA	1	True	AATAAA	-22	NA	24696003	24691121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_24691562_24695846
transcript_63011.known	chr22	+	1019	6	FSM	ENSG00000244752.3	ENST00000651629.1	1019	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.11468474101777	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGGTCTTTGATCT	NA	False	NA	NA	False	AATAAA	-19	NA	25212563	25231870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_25212841_25221403_25221484_25224917_25225037_25227852_25227986_25229435_25229579_25231603
transcript_63016.nnic	chr22	+	1044	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	2	-445	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	40.1825832917696	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCATTCATTCTTCAA	25445997	True	NA	31	True	AATAAA	-42	NA	25448088	25461223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_63018.known	chr22	+	1364	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	25	0	6	0	multi-exon	FALSE	canonical	3	79	junction_1	15.833114033569	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	25446013	True	NA	32	True	AATAAA	-24	NA	25448104	25461678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_6302.known	chr1	-	5506	5	FSM	ENSG00000052723.12	ENST00000369528.9	5506	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	126.235890300659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-114771700	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780436
transcript_63024.known	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_13	27.9460596242245	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481818	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_63027.nic	chr22	-	1309	4	ISM	ENSG00000100099.21	ENST00000398145.7	5066	14	-45	25711	0	398	5prime_fragment	FALSE	canonical	3	78	junction_3	36.0832371053374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	-26481851	True	NA	NA	False	ATTAAA	-11	NA	26483828	26476592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483673
transcript_63028.nic	chr22	-	1218	4	ISM	ENSG00000100099.21	ENST00000422379.2	1942	12	-45	12354	0	398	5prime_fragment	FALSE	canonical	3	87	junction_3	31.8433666561813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	-26481851	True	NA	NA	False	ATTAAA	-11	NA	26483828	26476592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483764
transcript_63029.known	chr22	-	2896	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	59.5201553164043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-26507824	False	NA	-59	True	NA	NA	NA	26512499	26491985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
transcript_6303.known	chr1	-	5494	5	FSM	ENSG00000052723.12	ENST00000060969.6	5494	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	71.2548243980715	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-114771700	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780448
transcript_63031.known	chr22	-	3539	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_10	21.0940556478234	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGCATTAAAGAGTCAT	-26507798	True	NA	NA	False	AATAAA	-21	NA	26512473	26491239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
transcript_63033.known	chr22	+	4020	7	FSM	ENSG00000100104.13	ENST00000215917.11	4020	7	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	20.8299997332907	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTAACTCATTCCTA	26480164	True	NA	6	True	AATAAA	-17	NA	26483876	26494658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
transcript_63034.known	chr22	-	2974	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	21.4351919893735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	-26507702	True	NA	0	True	AATAAA	-26	NA	26512377	26491926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
transcript_63035.known	chr22	+	981	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	26	656	8	-656	multi-exon	FALSE	canonical	3	31	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAGAAGGGACCTTT	26512132	True	NA	NA	False	NA	NA	NA	26512554	26513912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26513035_26513411
transcript_63036.known	chr22	+	2032	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	26512114	True	NA	21	True	AGTAAA	-18	NA	26512536	26514568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26512500_26514600
transcript_63039.nnic	chr22	-	906	5	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-5	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_4	191.698167701207	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-26586108	True	NA	18	True	AATAAA	-43	NA	26590137	26525745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26590052
transcript_63046.nic	chr22	-	814	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	14.3527000944073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26608331	False	90	-1	True	AATAAA	-22	NA	26608360	26599277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
transcript_63048.known	chr22	-	1041	6	FSM	ENSG00000100122.7	ENST00000647684.1	1041	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	14.5244621242922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26617998	True	NA	-1	True	AATAAA	-22	NA	26618027	26599277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26617976
transcript_63049.known	chr22	+	809	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.62480768092719	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	26621892	True	NA	6	True	AATAAA	-18	NA	26621962	26630669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
transcript_63050.nnic	chr22	+	1083	4	NIC	ENSG00000244625.7	novel	918	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	26672516	True	NA	5	True	AATAAA	-17	NA	26672790	26722172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_26672988_26693680_26693837_26717252_26717460_26721649
transcript_63051.nnic	chr22	+	957	3	Fusion	ENSG00000225783.9_ENSG00000244625.7	novel	706	3	NA	NA	-6	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	26672486	True	NA	5	True	AATAAA	-17	NA	26672760	26722172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_+_26672988_26717252_26717460_26721649
transcript_63053.known	chr22	+	9943	4	FSM	ENSG00000225783.9	ENST00000616213.4	9943	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	11.4309521329882	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	26654910	True	NA	15	True	ATTAAA	-17	NA	26657519	26676475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26668157
transcript_63070.known	chr22	-	2914	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	252.376800809379	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-27902360	True	NA	-1	True	AATAAA	-19	NA	27919256	27851668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_63073.known	chr22	-	2826	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	308.409289743354	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-27902359	True	NA	-2	True	AATAAA	-18	NA	27919255	27851669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_6308.known	chr1	-	349	4	FSM	ENSG00000052723.12	ENST00000510745.5	349	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	118.558939866305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCAGCAGTGAGTCT	-114771527	False	NA	NA	False	NA	NA	NA	114780512	114774344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780448
transcript_63080.known	chr22	+	1141	5	FSM	ENSG00000235954.8	ENST00000662424.1	1141	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	66.4807302908143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	27917986	True	NA	NA	False	ATTAAA	-21	NA	27919498	27986392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27940019_27940172_27985691
transcript_63082.known	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	12	junction_3	68.3585319392458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	27918005	True	NA	NA	False	NA	NA	NA	27919517	27986229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
transcript_63085.known	chr22	+	898	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	22	0	3	0	multi-exon	FALSE	canonical	3	126	junction_2	16	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	27917913	True	NA	20	True	AATAAA	-30	NA	27919425	27924963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922179_27924346
transcript_63091.known	chr22	+	874	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	7	13	2	-13	multi-exon	FALSE	canonical	3	12	junction_2	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	27917927	True	NA	NA	False	ATTAAA	-8	NA	27919439	27986379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27935150_27935231_27985691
transcript_63093.known	chr22	-	766	3	FSM	ENSG00000180957.19	ENST00000471825.1	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_2	61	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTATTTTAGAATTT	-27902348	True	NA	NA	False	NA	NA	NA	27919244	27910447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_27911110_27914316_27914348_27919171
transcript_63095.known	chr22	+	662	2	FSM	ENSG00000235954.8	ENST00000436996.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAATTTAGCCCCTAAA	27917924	True	NA	NA	False	AAGAAA	-21	NA	27919436	27922570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017
transcript_63096.known	chr22	-	2963	11	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	219.870325419325	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-27902410	True	NA	-2	True	AATAAA	-18	NA	27919306	27851669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896635_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_63097.known	chr22	+	626	3	FSM	ENSG00000235954.8	ENST00000670585.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	78	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTGTAATGGTTCC	27917985	True	NA	-26	True	AATAAA	-27	NA	27919497	27924714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922228_27924346
transcript_63098.known	chr22	+	4146	6	FSM	ENSG00000235954.8	ENST00000659843.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	7.52595508889071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCTAGCGAAAGCAGAAA	27917910	True	NA	NA	False	TTTAAA	-15	NA	27919422	28002641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27997985_27998153_27998603_27998839_27999429
transcript_631.known	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	6384	junction_2	127	9434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	-6124092	True	NA	NA	False	NA	NA	NA	6199563	6186574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651
transcript_63104.known	chr22	-	2560	16	FSM	ENSG00000183765.23	ENST00000416671.5	2560	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	316.668112277402	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28742350	True	NA	-18	True	ATTAAA	-18	NA	28742422	28687742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28721517_28721632_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_63105.known	chr22	-	1971	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	298.652946113415	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-28729590	True	NA	-38	True	NA	NA	NA	28741838	28687762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
transcript_63109.known	chr22	-	1959	16	FSM	ENSG00000183765.23	ENST00000405598.5	1959	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	316.890489321188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGATGGAACCTGGG	-28729552	True	NA	-37	True	NA	NA	NA	28741800	28687761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28737884_28738039_28741768
transcript_63110.known	chr22	-	1923	16	FSM	ENSG00000183765.23	ENST00000650281.1	1923	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	315.664477289134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAACCTGATGGAACC	-28729558	True	NA	-41	True	NA	NA	NA	28741806	28687765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28738081_28738198_28741768
transcript_63116.known	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_7	151.032500894776	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729572	True	NA	-18	True	ATTAAA	-18	NA	28741820	28687742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_6312.known	chr1	-	394	3	FSM	ENSG00000052723.12	ENST00000462123.5	394	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	177.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTTTTAGATTGTG	-114771552	False	NA	-10	True	AATAAA	-26	NA	114780537	114779097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780109_114780216_114780436
transcript_63129.known	chr22	-	1510	14	FSM	ENSG00000183765.23	ENST00000425190.7	1510	14	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_13	255.063050564588	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729563	True	NA	-18	True	ATTAAA	-18	NA	28741811	28687742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
transcript_6313.known	chr1	-	470	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	8.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-114771649	True	NA	-19	True	AATAAA	-17	NA	114780634	114779106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780109_114780216_114780448
transcript_63136.known	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	258.892269294762	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729586	True	NA	-18	True	ATTAAA	-18	NA	28741834	28687742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_6314.known	chr1	-	415	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-114771700	True	NA	-19	True	AATAAA	-17	NA	114780685	114779106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780448
transcript_63144.nic	chr22	-	1498	13	NIC	ENSG00000183765.23	novel	2560	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	336.328491458376	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729613	True	NA	-18	True	ATTAAA	-18	NA	28741861	28687742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
transcript_6315.known	chr1	-	412	2	FSM	ENSG00000052723.12	ENST00000474562.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTGAAATCTTGAG	-114771642	True	NA	-26	True	AATAAA	-10	NA	114780627	114779113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780386
transcript_63164.known	chr22	+	1048	6	FSM	ENSG00000100209.11	ENST00000450178.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	49.1503814837688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28739576	True	NA	6	True	AATAAA	-17	NA	28742041	28757510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742332_28743881_28743924_28744614_28744705_28745863_28746009_28751240_28751289_28757077
transcript_63165.known	chr22	+	792	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	42.4575081699339	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	28739595	True	NA	3	True	AATAAA	-15	NA	28742060	28757213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_63170.known	chr22	+	846	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	50.9195443813081	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28742265	True	NA	6	True	AATAAA	-17	NA	28742700	28757510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_63175.known	chr22	+	955	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	58.031780086432	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	28739589	True	NA	11	True	AATAAA	-22	NA	28742054	28757515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
transcript_63196.known	chr22	-	1794	6	NNC	ENSG00000100219.17	novel	1131	6	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	714.933115752795	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTTGTTTGATTTCTT	-28768913	True	NA	-9	True	ATTAAA	-13	NA	28800572	28794559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_28795733_28796046_28796124_28796149_28796193_28797076_28797206_28799056_28799154_28800297
transcript_63197.known	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	766.428894288309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	-28768474	False	NA	-38	True	TTTAAA	-2	NA	28800133	28794588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
transcript_63198.known	chr22	-	1850	5	FSM	ENSG00000100219.17	ENST00000216037.10	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	1709	junction_1	52.3187346941801	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	-28768938	True	NA	-4	True	ATTAAA	-18	NA	28800597	28794554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
transcript_63203.known	chr22	+	516	1	FSM	ENSG00000226471.7	ENST00000585003.1	516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTTCGTTCCATT	28800408	True	NA	NA	False	AATAAA	-41	NA	28800708	28801224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28800700_28801200
transcript_63214.known	chr22	+	2400	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	1422	junction_8	853.642526178259	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216194	True	NA	51	True	AATAAA	-21	NA	29268267	29300521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_6322.known	chr1	-	3216	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	6.32132768281074	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTGATTTATCTT	-115088037	True	NA	3	True	ATTAAA	-18	NA	115089503	115048010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_63221.known	chr22	+	2207	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_8	749.160277306365	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	29216199	True	NA	10	True	ATTAAA	-16	NA	29268272	29300336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63225.known	chr22	+	2552	17	FSM	ENSG00000182944.18	ENST00000332050.10	2552	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	1450.37083620018	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTTCTCGGCCTCTGT	29267989	False	NA	52	True	AATAAA	-22	NA	29268008	29300522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288986_29289063_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63239.known	chr22	+	1989	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	1290.53755208182	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	29216252	True	NA	10	True	ATTAAA	-16	NA	29268325	29300336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63249.known	chr22	+	2446	15	FSM	ENSG00000182944.18	ENST00000629659.2	2446	15	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_7	1520.85758735669	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCTCGGCCTCTGTTC	29267989	False	NA	54	True	AATAAA	-24	NA	29268008	29300524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63256.known	chr22	+	3231	8	FSM	ENSG00000182944.18	ENST00000483415.5	3231	8	0	0	0	0	multi-exon	FALSE	canonical	3	3655	junction_7	516.047854132833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGGCTTTATGCTG	29216239	True	NA	NA	False	NA	NA	NA	29268312	29291019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605
transcript_63264.known	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_4	83.9576612876329	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29260747	True	NA	-22	True	AATAAA	-19	NA	29267981	29259871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
transcript_63281.known	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	-29260726	True	NA	NA	False	NA	NA	NA	29267960	29265034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29265669_29267425_29267578_29267747
transcript_63282.known	chr22	+	1265	9	FSM	ENSG00000182944.18	ENST00000333395.10	1265	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	1547.72106155308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAACATTTTATGGT	29216244	True	NA	NA	False	ATTAAA	-22	NA	29268317	29290684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29290412
transcript_63284.known	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_9	33.8116474014503	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	-29381396	True	NA	-3	True	AATAAA	-13	NA	29388583	29327681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_63287.known	chr22	+	3795	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGTGGGTCTAGAGCG	29480135	True	NA	NA	False	NA	NA	NA	29480217	29491390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
transcript_63288.known	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_20	62.3869176991459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_63289.known	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	65.2869818570287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-29553748	False	NA	-52	True	NA	NA	NA	29553766	29508357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
transcript_63293.known	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
transcript_63294.known	chr22	-	4728	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	-29548095	True	NA	NA	False	NA	NA	NA	29553757	29505878	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
transcript_6330.known	chr1	-	671	7	FSM	ENSG00000134198.10	ENST00000433172.3	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	33.3087409282042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCAATTGTACATT	-115087948	True	NA	NA	False	NA	NA	NA	115089414	115050382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_115050556_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_63303.known	chr22	-	2013	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_4	181.135921954267	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	-29565315	True	NA	NA	False	ATTAAA	-14	NA	29581113	29554807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
transcript_63311.nnic	chr22	-	1012	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	76.3100401141437	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765666	True	NA	-23	True	TATAAA	-18	NA	29766959	29730955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766871
transcript_63312.nnic	chr22	-	983	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_6	76.3100401141437	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765714	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
transcript_63313.nnic	chr22	-	965	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.6198845598029	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765657	True	NA	-23	True	TATAAA	-18	NA	29766950	29730955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766069_29766147_29766871
transcript_63314.known	chr22	-	945	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	41.5567082430743	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765714	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_63315.nic	chr22	-	895	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_5	49.5314041795708	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765741	True	NA	-23	True	TATAAA	-18	NA	29767034	29730955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
transcript_63318.known	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	29712830	True	NA	100	True	NA	NA	NA	29767373	29770027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29767608_29769677
transcript_63319.known	chr22	+	916	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	0	0	0	0	multi-exon	FALSE	canonical	3	10139	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	29712825	True	NA	3	True	AATAAA	-14	NA	29767368	29770413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29767549_29769677
transcript_63321.known	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_19	70.0969863831534	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-29835459	True	NA	-49	True	AAAAAG	-1	NA	29838276	29788641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
transcript_63322.known	chr22	-	2790	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_19	51.9259540994797	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835457	True	NA	-18	True	AATAAA	-19	NA	29838274	29788610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
transcript_63327.known	chr22	-	562	2	FSM	ENSG00000100325.15	ENST00000492821.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTGTGAGCATTAAT	-29835457	True	NA	NA	False	GATAAA	-28	NA	29838274	29834085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29834551_29838177
transcript_63328.known	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	13.6633634219397	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-30288357	True	NA	-2	True	AATAAA	-16	NA	30289505	30285116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_63330.known	chr22	-	1972	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.49670995661129	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-30326279	True	NA	1	True	AATAAA	-17	NA	30326941	30291989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_63332.known	chr22	-	1460	8	FSM	ENSG00000239282.8	ENST00000404953.7	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	38.1677286487431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTTAATAAAGGACTT	-30288459	True	NA	-31	True	NA	NA	NA	30289607	30285145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_63333.known	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	123.277464823598	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	-30342974	True	NA	-13	True	AATAAA	-21	NA	30356894	30331987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
transcript_63337.known	chr22	+	4207	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.44544695704434	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGAACCATCCTAGGG	30396796	True	NA	NA	False	AATAAA	-29	NA	30397017	30425303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_63342.known	chr22	+	1759	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGGCACGGTGGCTG	30356328	True	NA	NA	False	AATAAA	-17	NA	30356634	30367096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30357133_30361960_30362115_30365989
transcript_63346.known	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	84.9365776460426	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	30416561	True	NA	33	True	AATAAA	-14	NA	30425767	30429054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
transcript_63347.known	chr22	+	891	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	408.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	30416569	True	NA	32	True	AATAAA	-13	NA	30425775	30429053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30425947_30426716_30426845_30428461
transcript_63350.known	chr22	-	2510	12	FSM	ENSG00000133488.15	ENST00000255858.12	2510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.55840859626733	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCTGCG	-30505510	True	NA	NA	False	NA	NA	NA	30505695	30488901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30490247_30491572_30491743_30491833_30491974_30492048_30492156_30492473_30492558_30494149_30494211_30494865_30494962_30495253_30495443_30495582_30495643_30495927_30495972_30503676_30503753_30505557
transcript_63351.known	chr22	-	882	4	FSM	ENSG00000128242.13	ENST00000452827.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.9629466182832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCGCTTCCACCTGGTG	-30560482	False	294	NA	False	NA	NA	NA	30560776	30555497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30556094_30557261_30557402_30558278_30558389_30560740
transcript_63352.known	chr22	-	533	3	FSM	ENSG00000128242.13	ENST00000427899.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGACCCCGCCCGCTTGT	-30560479	False	294	NA	False	NA	NA	NA	30560773	30555736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30556097_30557261_30557402_30560740
transcript_63353.known	chr22	-	1908	3	FSM	ENSG00000128242.13	ENST00000402321.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-30564774	False	NA	-2	True	AGTAAA	-27	NA	30565133	30554634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30556094_30557261_30557402_30564824
transcript_63356.known	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	185.754226474288	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-30581654	True	NA	NA	False	NA	NA	NA	30591858	30576834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_63359.known	chr22	-	2265	15	FSM	ENSG00000100029.18	ENST00000354694.12	2265	15	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_8	75.0095232049143	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCCATGAGCCTTC	-30581706	True	NA	-1	True	ATTAAA	-26	NA	30591910	30576624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_63360.known	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	204.106564803581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	-30581676	True	NA	-41	True	NA	NA	NA	30591880	30576664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_63379.known	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	103.921845634111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	30604483	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_6338.known	chr1	-	1061	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-115338037	True	NA	-1	True	ATTAAA	-13	NA	115338249	115285916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_115286808_115293626_115293751_115338203
transcript_63381.known	chr22	+	2192	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_7	28.3989436423259	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	30604453	True	NA	20	True	NA	NA	NA	30607173	30627271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_63382.known	chr22	+	1936	9	FSM	ENSG00000185339.9	ENST00000405742.7	1936	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	103.318606141392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCAGTGCCTGCCTCT	30604431	True	NA	-31	True	NA	NA	NA	30607151	30627005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30607396_30610870_30611064_30612884_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_6339.known	chr1	-	4746	2	FSM	ENSG00000203865.12	ENST00000674823.1	4746	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGATCTTGTTCCTAA	-116418463	True	NA	NA	False	NA	NA	NA	116418625	116401569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116406149_116418458
transcript_63391.known	chr22	-	713	4	FSM	ENSG00000100029.18	ENST00000466614.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_1	12.0277457017791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCTCCATGAAGGCAC	-30581686	True	NA	NA	False	NA	NA	NA	30591890	30586997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30587396_30588020_30588175_30589190_30589271_30591809
transcript_63392.known	chr22	-	490	3	FSM	ENSG00000100029.18	ENST00000467368.1	490	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAGAATGAATATAACA	-30606797	False	NA	NA	False	AATAAA	-22	NA	30606869	30603777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30604103_30605413_30605518_30606808
transcript_63393.known	chr22	-	630	3	FSM	ENSG00000100029.18	ENST00000492986.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAGAAGAATGAATATAA	-30606986	True	NA	NA	False	AATAAA	-20	NA	30607058	30603779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30604103_30605460_30605518_30606808
transcript_63394.known	chr22	+	1817	4	FSM	ENSG00000253352.10	ENST00000602971.2	1817	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.3425186885344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTACTGTTTCCAAG	30965088	True	NA	15	True	NA	NA	NA	30969294	30976022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30969387_30972047_30972173_30972854_30973602_30975169
transcript_63396.known	chr22	+	4449	3	FSM	ENSG00000253352.10	ENST00000643920.1	4449	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	45	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGCTTAAGTTACT	30965071	True	NA	4	True	AATAAA	-4	NA	30969277	30978831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30969387_30972923_30973602_30975169
transcript_63397.nic	chr22	+	905	4	ISM	ENSG00000183963.19	ENST00000624247.1	1263	9	3341	0	-761	0	3prime_fragment	FALSE	canonical	3	87	junction_2	9.97775303139718	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31098889	True	NA	21	True	GATAAA	-18	NA	31098900	31104624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_31099180_31099744_31099897_31100884_31101050_31104315
transcript_63398.nic	chr22	+	740	3	ISM	ENSG00000183963.19	ENST00000619644.4	3227	21	16041	-1	-761	0	3prime_fragment	FALSE	canonical	3	36	junction_2	37.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31098889	True	NA	21	True	GATAAA	-18	NA	31098900	31104624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_31099180_31099744_31099897_31104315
transcript_63399.known	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	115.243221058768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-31104291	True	NA	NA	False	NA	NA	NA	31107553	31105000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
transcript_634.known	chr1	-	1614	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	256.698236018481	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-6385801	False	6027	-7	True	AATAAA	-17	NA	6385813	6264272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
transcript_6340.known	chr1	-	301	2	FSM	ENSG00000203865.12	ENST00000676321.1	301	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCAGAAAAATTGGGATA	-116418413	True	NA	NA	False	AATAAA	-24	NA	116418575	116413729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116413914_116418458
transcript_63401.known	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	10.917302780449	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-31104306	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
transcript_63403.known	chr22	+	1613	7	FSM	ENSG00000185133.14	ENST00000404453.5	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	3.89087250997625	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	31127676	True	NA	-47	True	NA	NA	NA	31127788	31134636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_63404.known	chr22	+	1564	6	FSM	ENSG00000185133.14	ENST00000402238.5	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	15.9172862008572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	31127641	False	NA	-47	True	NA	NA	NA	31127759	31134636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133609_31133715_31133912
transcript_63406.known	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_4	16.5653168464181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	31122453	True	NA	14	True	ATTAAA	-14	NA	31122965	31134697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_63409.known	chr22	-	2600	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	11.1567119807864	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139189	True	NA	-7	True	ATTAAA	-22	NA	31140508	31134806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
transcript_6341.known	chr1	-	1086	6	FSM	ENSG00000116815.16	ENST00000369489.10	1086	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	18.661189672687	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-116569727	True	NA	-1	True	AATAAA	-22	NA	116571026	116514533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116514823_116519230_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_63413.nnic	chr22	-	2468	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	24.3195394693238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139192	True	NA	-7	True	ATTAAA	-22	NA	31140511	31134806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138666_31138800_31139840
transcript_63418.known	chr22	+	3182	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	7.83156008298049	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGACTTCTTGTCTGTG	31157784	True	NA	6	True	ATTAAA	-24	NA	31160181	31207019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_6342.known	chr1	-	874	6	FSM	ENSG00000116815.16	ENST00000464088.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	38.1124651524931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATTACAATTTTTGAAC	-116569685	True	NA	NA	False	AAAAAG	-19	NA	116570984	116514738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116514823_116519230_116519303_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_63421.nic	chr22	+	2731	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	46.1059649069402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31207705	True	NA	NA	False	ATTAAA	-19	NA	31212299	31277638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_63422.known	chr22	+	3667	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_15	25.2222124326951	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	31207703	True	NA	44	True	AATAAA	-25	NA	31212297	31280080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_63424.known	chr22	+	2657	15	FSM	ENSG00000182541.18	ENST00000406516.5	2657	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	58.7700899215558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31207679	True	NA	NA	False	ATTAAA	-19	NA	31212273	31277638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_6343.known	chr1	-	892	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	4.49691252107735	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTTACGTGTGT	-116569740	True	NA	NA	False	AATAAA	-36	NA	116571039	116521786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
transcript_63430.known	chr22	-	3711	5	FSM	ENSG00000100105.18	ENST00000405309.7	3711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.330488510323	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	-31346188	False	NA	-7	True	ATTAAA	-16	NA	31346232	31325808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31327310_31328786_31328860_31335691_31335864_31342896_31342961_31344331
transcript_63431.known	chr22	-	3895	5	FSM	ENSG00000100105.18	ENST00000266269.10	3895	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	170.426670448026	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCCTTGAGTCCAGT	-31346302	False	885	-2	True	ATTAAA	-21	NA	31346346	31325803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31327310_31328786_31328925_31335691_31335864_31342896_31342961_31344331
transcript_63433.known	chr22	-	3638	4	FSM	ENSG00000100105.18	ENST00000351933.8	3638	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_2	43.0219582177391	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	-31346188	False	NA	-7	True	ATTAAA	-16	NA	31346232	31325808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31327310_31335691_31335864_31342896_31342961_31344331
transcript_63434.nnic	chr22	-	1189	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	40	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31343299	False	209	-4	True	GATAAA	-17	NA	31343343	31340676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_31341684_31342896_31342961_31343225
transcript_63435.nnic	chr22	-	1136	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	43.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31343270	False	209	-4	True	GATAAA	-17	NA	31343314	31340676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_31341684_31342896_31342961_31343249
transcript_63436.known	chr22	-	2516	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31345732	False	879	-4	True	GATAAA	-17	NA	31345776	31340676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31341684_31342896_31342961_31344331
transcript_63437.known	chr22	+	1943	1	FSM	ENSG00000213888.3	ENST00000504184.3	1943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTGCTCTGAGTGTCC	31346488	True	NA	NA	False	AAAAAG	-21	NA	31346776	31348719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31346800_31348700
transcript_63446.known	chr22	+	1665	9	FSM	ENSG00000185721.13	ENST00000331457.9	1665	9	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_4	48.0414859782667	1716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCTATTTTGGGAGAT	31386994	True	NA	NA	False	NA	NA	NA	31399603	31434452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31399726_31400619_31400744_31403028_31403205_31411011_31411082_31420255_31420426_31423279_31423411_31426614_31426783_31427059_31427183_31433871
transcript_6346.known	chr1	+	849	5	FSM	ENSG00000116830.12	ENST00000470935.1	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	96.1327207562545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGAGGCTAAAGAAACAA	117053902	True	NA	NA	False	NA	NA	NA	117060361	117075444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117060375_117060454_117060562_117062386_117062474_117073660_117073728_117074869
transcript_63469.known	chr22	-	3647	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	30.5089037803154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31488256	True	NA	15	True	ATTAAA	-28	NA	31489842	31439366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_63471.nic	chr22	-	1720	10	ISM	ENSG00000184708.18	ENST00000330125.10	3647	19	52	14693	34	-9428	5prime_fragment	FALSE	canonical	3	143	junction_1	14.8457085290125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGTAAGTTGGAAA	-31488204	True	NA	NA	False	AATAAA	-17	NA	31489790	31454059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_63473.known	chr22	+	873	1	FSM	ENSG00000287817.1	ENST00000665497.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTTACAGGCAAGA	31490139	False	NA	9	True	AATAAA	-17	NA	31490149	31491022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31490100_31491000
transcript_63474.known	chr22	-	1723	8	FSM	ENSG00000241878.12	ENST00000435900.5	1723	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	133.697343248984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACCTGATGAGTGACC	-31658571	True	NA	NA	False	NA	NA	NA	31662180	31618976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31619837_31620552_31620600_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63477.known	chr22	-	1963	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-217	612	-211	-126	multi-exon	FALSE	canonical	3	366	junction_5	31.8331107304252	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	NA	False	NA	NA	False	NA	NA	NA	31662432	31619102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63483.known	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	25.7336787541584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31658606	True	NA	0	True	AATAAA	-18	NA	31662215	31618490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63485.known	chr22	-	10827	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_8	19.8557296516648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-31743452	True	NA	-8	True	AATAAA	-22	NA	31750132	31681346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
transcript_63490.known	chr22	-	661	3	FSM	ENSG00000183530.14	ENST00000412743.1	661	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	22	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTATTTATTTCTCT	-31743460	True	NA	NA	False	NA	NA	NA	31750140	31725543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31725611_31738386_31738912_31750071
transcript_63494.known	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.5389701121818	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	31753933	False	NA	6	True	AATAAA	-20	NA	31753943	31784788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_63496.known	chr22	+	1278	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	20.9250896055429	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	31751432	True	NA	NA	False	AATACA	-30	NA	31754027	31784504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_635.known	chr1	-	1804	9	FSM	ENSG00000097021.20	ENST00000545482.5	1804	9	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_8	43.8463225367875	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-6393511	True	NA	-7	True	AATAAA	-17	NA	6393766	6264272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
transcript_6350.nic	chr1	-	1720	7	NIC	ENSG00000134253.10	novel	2415	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	27.4631065653946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTTCAAGTGCTCTTT	-117120462	True	NA	-9	True	ATTAAA	-22	NA	117121762	117112184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_63500.known	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31921613	True	NA	38	True	AATAAA	-20	NA	31944534	31957603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31944821_31956138
transcript_63501.known	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31944953	False	NA	38	True	AATAAA	-20	NA	31944965	31957603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31945236_31956138
transcript_63502.known	chr22	+	407	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGCAGTGCTGTA	32039221	False	NA	NA	False	NA	NA	NA	32039489	32039896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32039500_32039900
transcript_63505.known	chr22	-	2019	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_1	99.6411744027721	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCGTCTGTTGCTTTG	-32397327	True	NA	-10	True	AAGAAA	-29	NA	32412247	32387581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_63516.known	chr22	-	767	5	FSM	ENSG00000100220.12	ENST00000487704.5	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	1386	junction_2	100.129915609672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGCCTTTGACATAGA	-32397321	True	NA	NA	False	NA	NA	NA	32412241	32401561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_63517.known	chr22	+	2060	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	54.9357579359746	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469216	True	NA	57	True	ATTAAA	-16	NA	32474810	32498829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63518.known	chr22	+	1888	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	172.636856942543	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474787	False	NA	57	True	ATTAAA	-16	NA	32475256	32498829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63519.known	chr22	+	1535	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	181.946420684772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTGTTATTTTCTGAT	32474767	False	NA	NA	False	NA	NA	NA	32475236	32498608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_6352.known	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	10.777754868246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120449	True	NA	-14	True	AATAAA	-22	NA	117121749	117111059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_63522.known	chr22	+	1900	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	181.76728786769	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	NA	False	NA	57	True	ATTAAA	-16	NA	32474675	32498829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63523.nnic	chr22	+	1609	8	NIC	ENSG00000100225.18	novel	1888	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	187.561364108183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474771	False	NA	57	True	ATTAAA	-16	NA	32475240	32498829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_32475399_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63526.known	chr22	+	4216	12	FSM	ENSG00000100281.14	ENST00000418170.5	4216	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	27.9852381394014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	35253700	True	NA	35	True	AATAAA	-45	NA	35257486	35295807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
transcript_6353.known	chr1	+	8576	13	FSM	ENSG00000198162.12	ENST00000356554.7	8576	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	6.56378955583841	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTTTAGCCTTCATT	117366270	True	NA	15	True	AATAAA	-20	NA	117367448	117528872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117368486_117402185_117402442_117405548_117405646_117414712_117414832_117420568_117420650_117442230_117442326_117460488_117460613_117466333_117466428_117493146_117493263_117496762_117496983_117499381_117499555_117502854_117502971_117522824
transcript_63530.known	chr22	+	1325	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	21.7987958383026	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	35253709	True	NA	2	True	AAAAAG	-7	NA	35257495	35265567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_63532.nic	chr22	+	1327	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-12	30237	-6	0	5prime_fragment	FALSE	canonical	3	30	junction_4	31.9951168149141	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253694	True	NA	5	True	AAAAAG	-10	NA	35257480	35265570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_63533.known	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	32.3831231765354	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253665	True	NA	5	True	AAAAAG	-10	NA	35257451	35265570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
transcript_63536.known	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_14	21.3724264472918	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	35295975	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_63539.known	chr22	+	1554	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	14.7139389695622	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	35379948	True	NA	18	True	AATAAA	-19	NA	35381095	35394207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_6354.nnic	chr1	-	2352	15	NNC	ENSG00000196505.11	novel	8819	14	NA	NA	-27	109	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	19.9729408787724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGAGTCCAAGAATGT	-117928389	True	NA	78	True	TATAAA	-27	NA	117929648	117870074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_117870617_117877745_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_63540.known	chr22	+	1454	4	FSM	ENSG00000100292.18	ENST00000679074.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.273139846559	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	35379948	True	NA	18	True	AATAAA	-19	NA	35381095	35394207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35393467
transcript_63543.known	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_10	102.752737189819	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	35376293	True	NA	19	True	AATACA	-16	NA	35400139	35425431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_63547.known	chr22	-	582	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCCCGGGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	35622561	35607271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
transcript_63550.known	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_12	84.0459530389312	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	-35840110	True	NA	-31	True	NA	NA	NA	35840284	35744147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_63551.nic	chr22	-	1648	13	NIC	ENSG00000100320.23	novel	1254	13	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_12	98.9069076904586	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGCATTTCCATGTCT	NA	False	NA	NA	False	TTTAAA	-20	NA	35840460	35743932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_63552.known	chr22	-	1935	13	FSM	ENSG00000100320.23	ENST00000449924.6	1935	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	120.340114074882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	NA	False	NA	-3	True	ATTAAA	-20	NA	35840407	35743601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_63557.nic	chr22	-	1506	13	NIC	ENSG00000100320.23	novel	1935	13	NA	NA	-47	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	129.687980253462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	NA	False	NA	30	True	AAAACA	-12	NA	35840460	35744086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_63558.known	chr22	-	6932	12	FSM	ENSG00000100320.23	ENST00000405409.6	6932	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	130.731508339525	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	NA	False	NA	-5	True	AATAAA	-15	NA	35840587	35738735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_63560.known	chr22	-	1706	12	FSM	ENSG00000100320.23	ENST00000414461.6	1706	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	147.255049444075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	-35840044	True	NA	-3	True	ATTAAA	-20	NA	35840218	35743601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_63562.nnic	chr22	-	693	2	NNC	ENSG00000100320.23	novel	6932	12	NA	NA	-51	-60237	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATACTGCTTTAT	NA	False	NA	NA	False	AATAAA	-45	NA	35840464	35838264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_35838685_35840191
transcript_63563.known	chr22	-	2429	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.83242742918897	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTTGTTCGAGTCAT	-36238941	True	NA	-5	True	AATAAA	-17	NA	36239527	36226208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
transcript_63564.known	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_34	194.160140090596	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-36373604	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_63565.known	chr22	-	570	5	FSM	ENSG00000100348.10	ENST00000411915.1	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.109765147264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGACGTGGTGGACAAG	-36477849	True	NA	NA	False	NA	NA	NA	36481596	36467883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36468601_36468718_36476732_36476857_36480574_36480838_36481563
transcript_6357.nic	chr1	-	2213	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	17.7449331658709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATACAGAACCAATGT	-117928389	True	NA	-31	True	NA	NA	NA	117929648	117870183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_63570.nnic	chr22	-	1289	5	NNC	ENSG00000100348.10	novel	570	5	NA	NA	-424	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	302.66431487706	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAATGTCACATCTGTG	NA	False	NA	-16	True	AATAAA	-17	NA	36482064	36467047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_36467328_36467796_36467918_36476732_36476857_36480574_36480838_36481563
transcript_63575.known	chr22	-	736	4	FSM	ENSG00000100348.10	ENST00000487725.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	318.911691015972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAGGATGTGTG	-36477885	True	NA	NA	False	NA	NA	NA	36481632	36467548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480749_36481563
transcript_63576.known	chr22	-	1280	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	315.140533025435	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-36477887	True	NA	-14	True	AATAAA	-19	NA	36481634	36467045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
transcript_63577.known	chr22	-	912	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	333.053549247965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCATACGCCTTTCA	-36481235	False	3747	NA	False	NA	NA	NA	36481340	36467590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
transcript_63578.known	chr22	-	1336	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_3	26.2424592343528	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-36477893	True	NA	-14	True	AATAAA	-19	NA	36481640	36467045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
transcript_6358.known	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	9.44996164796075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-117928362	True	NA	-21	True	AGTAAA	-16	NA	117929621	117863484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_63590.nnic	chr22	-	1210	3	NIC	ENSG00000100348.10	novel	1336	4	NA	NA	0	-2	combination_of_known_splicesites	TRUE	canonical	3	43	junction_1	308.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAATGTCACATCTGTG	-36477893	True	NA	-16	True	AATAAA	-17	NA	36481640	36467047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36467918_36480574_36480838_36481563
transcript_63607.known	chr22	-	1880	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	0	0	0	multi-exon	TRUE	canonical	3	1480	junction_9	105.668522913372	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-36501563	True	NA	-23	True	AATAAA	-23	NA	36529166	36510854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
transcript_63625.known	chr22	-	1851	15	FSM	ENSG00000100353.18	ENST00000405442.5	1851	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	461.331834176322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTTAGCAGATGAAATA	-36528887	False	NA	-67	True	NA	NA	NA	36528897	36510898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36528791
transcript_63627.nic	chr22	-	864	8	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	225.560707245436	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772136	True	NA	-8	True	AATAAA	-17	NA	36776146	36758210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673_36775795_36776030
transcript_63630.known	chr22	-	1073	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.80006478781	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772109	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_63634.nnic	chr22	-	1238	6	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	-138	0	intron_retention	FALSE	canonical	0	0	junction_2	260.571986214942	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	NA	False	NA	-8	True	AATAAA	-17	NA	36776394	36758210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36758410_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_63636.known	chr22	-	406	3	FSM	ENSG00000100360.15	ENST00000465023.1	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTCTCTTTATGGGAA	-36771689	False	NA	NA	False	NA	NA	NA	36775699	36767062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36767366_36767782_36767860_36775673
transcript_63637.nic	chr22	-	703	5	NIC	ENSG00000100362.13	novel	595	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	16.3305694940501	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36817482	True	NA	-20	True	AATAAA	-15	NA	36817531	36800702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817355
transcript_63638.nnic	chr22	-	552	5	NNC	ENSG00000100362.13	novel	595	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	18.3915741577495	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36817482	True	NA	-20	True	AATAAA	-15	NA	36817531	36800702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817506
transcript_63639.known	chr22	-	1125	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	41	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-37018196	True	NA	-3	True	AATAAA	-16	NA	37019447	37010864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37011326_37018137_37018754_37019399
transcript_6364.known	chr1	-	2436	13	FSM	ENSG00000196505.11	ENST00000369442.3	2436	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	7.26244143216009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	-117928324	True	NA	0	True	AATAAA	-16	NA	117929583	117877221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_63640.nnic	chr22	-	1158	3	NNC	ENSG00000128311.14	novel	1125	3	NA	NA	-213	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	54.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	NA	False	NA	-3	True	AATAAA	-16	NA	37020396	37010864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_37011326_37018137_37018754_37020315
transcript_63641.known	chr22	-	688	6	FSM	ENSG00000133466.14	ENST00000497071.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.65329983228432	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTACCTTGTGTA	-37199163	True	NA	-2	True	AATAAA	-16	NA	37199385	37190552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37190678_37190864_37190929_37191671_37191738_37195380_37195513_37197602_37197842_37199323
transcript_63643.known	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	3.74165738677394	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-37243762	True	NA	-10	True	AATAAA	-14	NA	37244269	37225269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
transcript_63644.known	chr22	-	2073	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	3.98978286964827	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	-37486307	True	NA	0	True	ATTAAA	-21	NA	37486384	37469062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_63647.known	chr22	+	2800	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	25.4545397473614	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37606374	True	NA	17	True	AATAAA	-18	NA	37608833	37633564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_63649.known	chr22	+	2528	15	FSM	ENSG00000100083.19	ENST00000325180.12	2528	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	67.0382163320266	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37606385	True	NA	17	True	AATAAA	-18	NA	37608844	37633564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_6365.nic	chr1	-	2099	11	ISM	ENSG00000196505.11	ENST00000369442.3	2436	13	-65	5682	-27	0	5prime_fragment	FALSE	canonical	3	52	junction_4	5.40462764674866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAAAAGTGGCACTCA	-117928389	True	NA	NA	False	NA	NA	NA	117929648	117882903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_63653.known	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	41.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	37606370	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37608904_37614189_37614275_37616921
transcript_63654.known	chr22	+	528	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	12.684198393627	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37673773	True	NA	13	True	AATAAA	-26	NA	37675635	37679802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
transcript_63655.nnic	chr22	+	384	3	NIC	ENSG00000100097.12	novel	528	4	NA	NA	-32	-4	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	76.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGCCTCGTGTGTGT	37673741	True	NA	9	True	AATAAA	-22	NA	37675603	37679798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_37675712_37676985_37677066_37679602
transcript_63656.nnic	chr22	+	617	3	NNC	ENSG00000100097.12	novel	185	3	NA	NA	470	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37675606	False	NA	13	True	AATAAA	-26	NA	37677468	37679802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37677714_37678482_37678655_37679602
transcript_63658.known	chr22	+	903	7	FSM	ENSG00000273899.5	ENST00000611699.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	20.5182845286832	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	37682814	True	NA	20	True	ATTAAA	-14	NA	37686359	37693471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_63660.nnic	chr22	+	1560	7	NNC	ENSG00000273899.5	novel	903	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	99.6404647832507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	NA	False	NA	20	True	ATTAAA	-14	NA	37686304	37693471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37692027_37693331
transcript_63662.nnic	chr22	+	1317	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	220	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.436489348476	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	37683034	False	NA	20	True	ATTAAA	-14	NA	37686579	37693471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37687110_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_63666.known	chr22	+	2830	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	11.0090871556183	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	37682797	True	NA	23	True	ATTAAA	-17	NA	37686342	37693474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
transcript_63669.known	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	37771006	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37805200_37807400
transcript_63673.known	chr22	+	1473	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	18.9802528961023	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805145	True	NA	16	True	NA	NA	NA	37807933	37816897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_63675.nic	chr22	+	1555	9	ISM	ENSG00000100116.17	ENST00000323205.10	1656	10	25	279	-4	0	5prime_fragment	TRUE	canonical	3	21	junction_1	108.463055346049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805141	True	NA	16	True	NA	NA	NA	37807929	37816897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_63679.nic	chr22	+	1339	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	112.064667919547	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805148	True	NA	16	True	NA	NA	NA	37807936	37816897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_63684.known	chr22	-	1140	1	FSM	ENSG00000100124.15	ENST00000609706.1	1140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCCTTAGTTTAGCC	-37848867	True	NA	-2	True	AATAAA	-19	NA	37849318	37848178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37848200_37849300
transcript_63685.known	chr22	-	1942	7	FSM	ENSG00000128346.11	ENST00000403305.6	1942	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.91070819942883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGCCCTGTAAATGGT	-37953557	True	NA	NA	False	NA	NA	NA	37953601	37943049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37944247_37944416_37944518_37945041_37945174_37947280_37947464_37951459_37951523_37953046_37953159_37953447
transcript_63687.known	chr22	+	550	6	FSM	ENSG00000100142.16	ENST00000492213.5	550	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	949.31941937369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATCATCACCGACTG	37927339	True	NA	-91	True	NA	NA	NA	37953698	37967694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956843_37958373_37958472_37959345_37959477_37967098_37967171_37967624
transcript_6369.known	chr1	+	10004	27	FSM	ENSG00000065183.16	ENST00000349139.6	10004	27	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_1	59.5951454478194	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCACTCGTGTAA	117920309	True	NA	8	True	AATAAA	-24	NA	117929738	117966543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_63693.known	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1805	junction_4	112.226333808068	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	37927339	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_63694.known	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	826.828881933862	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	37927339	True	NA	13	True	AATAAA	-14	NA	37953698	37967798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
transcript_63695.known	chr22	+	584	5	FSM	ENSG00000100142.16	ENST00000470701.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	849.756251815778	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTCCCCTCTGCTTAT	37927367	True	NA	16	True	AATAAA	-17	NA	37953726	37967801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953861_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_63696.known	chr22	+	760	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	1967	junction_3	52.8225541054408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	37927351	True	NA	48	True	NA	NA	NA	37953710	37967560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
transcript_63700.known	chr22	+	2164	13	FSM	ENSG00000100151.16	ENST00000404072.7	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.5293570862829	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	NA	False	NA	13	True	AATAAA	-20	NA	38057199	38075701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38057490_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_63701.known	chr22	+	2058	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	14.4702760474322	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	38054666	True	NA	13	True	AATAAA	-20	NA	38057403	38075701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_63702.nic	chr22	-	734	2	ISM	ENSG00000100156.12	ENST00000320521.10	2091	5	2353	0	2161	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATTCCTCCGCCCAG	-38080955	True	NA	NA	False	GATAAA	-20	NA	38081002	38078133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_38078705_38080839
transcript_63706.nnic	chr22	-	1379	11	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8247	12	multi-exon	FALSE	canonical	3	80	junction_10	293.8047140534	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38334625	True	NA	-103	True	NA	NA	NA	38336187	38291917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_63708.known	chr22	-	1770	15	FSM	ENSG00000283900.1	ENST00000400206.7	1770	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	436.904486830068	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38396478	False	NA	-103	True	NA	NA	NA	38398522	38291917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336607_38336707_38361398_38361561_38380369_38380424_38380936_38380991_38398437
transcript_6371.nic	chr1	+	3658	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	5	-6483	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	60.0199177985473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCAAGCTAAGATGCCT	117920314	True	NA	16	True	AATAAA	-22	NA	117929743	117960060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_63710.nnic	chr22	-	1478	8	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1631	8	NA	NA	8211	0	multi-exon	FALSE	canonical	3	27	junction_1	436.460438397015	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-38334661	True	NA	-4	True	AATAAA	-16	NA	38336223	38296204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_63714.known	chr22	-	974	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.231339818882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAACTCCGTTCCCCC	-38396816	True	NA	NA	False	NA	NA	NA	38398860	38350376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_63715.nnic	chr22	-	894	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	-2	-4490	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.9706941788422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTTAAATCAGCTTG	-38396887	True	NA	-14	True	ATTAAA	-13	NA	38398931	38354866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_38355339_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_63723.known	chr22	-	792	5	FSM	ENSG00000244627.5	ENST00000455209.5	792	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	51.3438165702551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACTTTCAGATTATT	-38396877	True	NA	NA	False	NA	NA	NA	38398921	38368897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38369380_38369985_38370046_38380369_38380424_38380936_38380991_38398779
transcript_63726.known	chr22	-	679	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	27.9324582201822	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-38396885	True	NA	NA	False	NA	NA	NA	38398929	38361139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
transcript_63730.known	chr22	+	1694	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	2.95803989154981	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	38467189	True	NA	18	True	AATAAA	-21	NA	38468095	38483447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
transcript_63732.known	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	38467171	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
transcript_63735.known	chr22	-	2269	14	FSM	ENSG00000100206.11	ENST00000216024.7	2269	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.27057234197884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	-38569562	True	NA	1	True	AATAAA	-20	NA	38570183	38518947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38539320_38539413_38549924_38549998_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
transcript_63747.known	chr22	-	269	2	FSM	ENSG00000100206.11	ENST00000464842.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGATTTCTTTTT	-38569583	True	NA	-20	True	AATAAA	-22	NA	38570204	38569283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38569391_38570042
transcript_63754.nnic	chr22	+	1332	6	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	140.020569917423	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38652996	True	NA	10	True	ATTAAA	-10	NA	38656635	38673846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_38656751_38656955_38657144_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_63755.known	chr22	+	1269	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	125.789665712252	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38653011	True	NA	10	True	ATTAAA	-10	NA	38656650	38673846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_63757.known	chr22	+	776	5	FSM	ENSG00000100211.11	ENST00000489847.1	776	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	131.96306301386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACTAGAAGGTGCTTC	38653048	True	NA	NA	False	AATAGA	-42	NA	38656687	38673413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38656751_38668016_38668133_38670766_38670990_38671069_38671189_38673158
transcript_63759.known	chr22	+	1133	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	17	-4	4	4	multi-exon	FALSE	canonical	3	305	junction_2	5.2618912949623	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	38653015	True	NA	18	True	ATTAAA	-18	NA	38656654	38673854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_63761.nnic	chr22	+	1028	4	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	144.730400707277	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38652996	True	NA	10	True	ATTAAA	-10	NA	38656635	38673846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_38656751_38670883_38670990_38671069_38671189_38673158
transcript_63762.known	chr22	-	786	2	FSM	ENSG00000228274.5	ENST00000431924.3	876	2	90	0	17	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTAATCTGT	-38681558	False	NA	NA	False	AATAAA	-21	NA	38681770	38667584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38668326_38681725
transcript_63763.known	chr22	+	2031	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_2	66.6399946645323	1009	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGACATCTTTTGAA	38656578	True	NA	8	True	ATTAAA	-16	NA	38681956	38685421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
transcript_63765.known	chr22	-	1474	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0.471404520791032	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	-38793065	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
transcript_63767.known	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	7.77751862218069	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	38981923	True	NA	26	True	AATAAA	-39	NA	38982346	38992779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
transcript_63769.known	chr22	-	691	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	1.92028643696715	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCGTAATCATAGATGCG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
transcript_6377.known	chr1	-	2787	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	10.4115320678563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-119139490	True	NA	-3	True	ACTAAA	-20	NA	119140653	119031215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_63771.known	chr22	+	1056	3	FSM	ENSG00000244509.4	ENST00000428892.1	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	168.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGTGAACAGAGATC	39011834	True	NA	NA	False	NA	NA	NA	39014261	39018926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39014380_39017765_39018046_39018268
transcript_63775.known	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	49.2702299117383	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	39011829	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
transcript_63776.known	chr22	+	616	3	FSM	ENSG00000128394.17	ENST00000381565.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	30	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCTCTGGGAAGTC	39040841	False	NA	3	True	AATAAA	-20	NA	39040856	39044423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39040978_39042936_39043091_39044082
transcript_63777.known	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	12.5095881594226	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	39077230	False	NA	14	True	AATAAA	-24	NA	39077274	39087743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_63778.known	chr22	+	1029	5	FSM	ENSG00000100298.16	ENST00000442487.8	1029	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.23606797749979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	39097233	True	NA	NA	False	AATAAA	-18	NA	39097243	39104067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39097344_39100271_39100429_39101236_39101505_39101917_39102043_39103688
transcript_63779.nic	chr22	+	797	3	ISM	ENSG00000100298.16	ENST00000442487.8	1029	5	3968	0	933	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	39101169	True	NA	NA	False	AATAAA	-18	NA	39101211	39104067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_39101505_39101917_39102043_39103688
transcript_63780.known	chr22	-	3728	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	4.11298755975102	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGTCTCCATAGAGG	-39244481	True	NA	NA	False	NA	NA	NA	39244982	39223358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
transcript_63794.known	chr22	-	2108	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_7	15278.4201481116	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	-39320081	False	NA	-3	True	AATAAA	-17	NA	39320389	39312883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
transcript_6380.known	chr1	-	621	5	FSM	ENSG00000116874.12	ENST00000495746.5	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36.3627556711534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGCCACCGTCCGA	-119139491	True	NA	NA	False	NA	NA	NA	119140654	119033296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_119033360_119034094_119034214_119045581_119045663_119076349_119076608_119140554
transcript_63808.known	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22290	junction_9	5404.97071176725	63941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-38740323	True	NA	-1	True	AATAAA	-19	NA	39319623	39312881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
transcript_63813.known	chr22	+	1361	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_3	32.8667342798493	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATTCTTCTCTCCA	39349903	False	NA	17	True	AATAAA	-31	NA	39349924	39378389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
transcript_63818.known	chr22	+	928	4	FSM	ENSG00000100321.15	ENST00000415332.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	228.391476782008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	39345072	True	NA	6	True	AGTAAA	-14	NA	39349986	39377911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39350110_39374315_39374661_39376051_39376198_39377597
transcript_6382.known	chr1	+	745	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	0	482	0	-482	multi-exon	FALSE	canonical	1	2	junction_3	4.64279609239471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	119139872	True	NA	NA	False	NA	NA	NA	119140395	119150934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
transcript_63822.known	chr22	+	406	1	FSM	ENSG00000280216.1	ENST00000623458.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAGTTTGATTTACTTA	39379598	False	NA	6	True	AATAAA	-21	NA	39379609	39380015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39379600_39380000
transcript_63823.known	chr22	+	4383	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	211.950203795346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	39345076	True	NA	16	True	AATAAA	-19	NA	39349990	39385575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
transcript_63824.known	chr22	+	3198	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	13.499629624549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	39395779	True	NA	15	True	AATAAA	-28	NA	39399779	39431882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
transcript_63825.known	chr22	+	1660	11	FSM	ENSG00000100324.14	ENST00000331454.3	1660	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	28.5455775909334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGAGCTCAGGGCTCT	39395783	True	NA	NA	False	NA	NA	NA	39399783	39436823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39436489
transcript_63826.known	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	31.6328942716281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	39498175	True	NA	6	True	AATAAA	-17	NA	39502289	39518132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_6383.nic	chr1	+	1378	3	FSM	ENSG00000231365.7	ENST00000688395.1	1350	3	-30	2	-8	-2	multi-exon	FALSE	canonical	3	5	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	119139859	True	NA	13	True	AATAAA	-23	NA	119140382	119151414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119140794_119146952_119147070_119150564
transcript_63831.known	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	43.1295722213889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	39498187	True	NA	8	True	ATTAAA	-20	NA	39502301	39516380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_63835.known	chr22	+	1004	2	FSM	ENSG00000128272.18	ENST00000680446.1	1004	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	39497485	True	NA	-41	True	AAGAAA	-13	NA	39520577	39522602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39520752_39521772
transcript_63836.known	chr22	+	1910	4	FSM	ENSG00000128272.18	ENST00000404241.6	1910	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	202.129221594064	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	39519684	False	NA	29	True	AATAAA	-17	NA	39519694	39522683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39519802_39520177_39520752_39521353_39521672_39521772
transcript_63837.known	chr22	+	2019	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	39497471	True	NA	29	True	AATAAA	-17	NA	39520563	39522683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39521672_39521772
transcript_63838.known	chr22	+	1419	3	FSM	ENSG00000128272.18	ENST00000674920.3	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	65.5	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	39497469	True	NA	29	True	AATAAA	-17	NA	39520561	39522683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39520752_39521353_39521672_39521772
transcript_63840.known	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	423.869304739091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-39519396	True	NA	-88	True	NA	NA	NA	39532761	39529155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
transcript_63842.nnic	chr22	-	861	4	NNC	ENSG00000187051.9	novel	820	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	458.694766581099	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	-39519379	True	NA	-25	True	AATAAA	-14	NA	39532744	39529092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_39529624_39529819_39529918_39532394_39532524_39532641
transcript_63843.known	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	123.104291828785	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	-39519383	True	NA	-25	True	AATAAA	-14	NA	39532748	39529092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
transcript_63845.known	chr22	-	647	3	FSM	ENSG00000187051.9	ENST00000491966.1	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_2	128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTCCTGCTGGCTCCAGG	-39519367	True	NA	NA	False	NA	NA	NA	39532732	39529445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39529918_39532394_39532524_39532686
transcript_63848.nic	chr22	+	583	5	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	-95	89720	-95	-275	5prime_fragment	FALSE	canonical	2	10	junction_1	1.4790199457749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCACTCAGAAGGTAGG	40044639	False	NA	66	True	GATAAA	-10	NA	40044721	40246087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014
transcript_6385.nnic	chr1	+	999	4	NNC	ENSG00000232650.6	novel	1219	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.4142135623731	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	119327079	True	NA	17	True	ATTAAA	-26	NA	119327404	119330815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_119327917_119328130_119328288_119328743_119328790_119330531
transcript_63850.known	chr22	+	564	2	FSM	ENSG00000100354.21	ENST00000489500.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTAGAGATGGGG	40170630	True	NA	NA	False	NA	NA	NA	40177924	40246362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40178141_40246014
transcript_63853.known	chr22	-	4522	15	FSM	ENSG00000196588.21	ENST00000355630.10	4522	15	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	19.5235336798167	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTAGTCCATCTTATT	-40632156	True	NA	-24	True	AATAAA	-14	NA	40636719	40410288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
transcript_63854.known	chr22	+	2986	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_19	44.7005658752678	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	40364536	True	NA	9	True	NA	NA	NA	40370593	40410289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_63865.known	chr22	+	1859	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	332.748567942006	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	40335240	True	NA	-41	True	NA	NA	NA	40346499	40367837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
transcript_63868.known	chr22	+	4359	13	FSM	ENSG00000239900.14	ENST00000623063.3	4359	13	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_11	89.9979938048004	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTCTGCGTGTTCAC	40335240	True	NA	10	True	NA	NA	NA	40346499	40369367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_63872.known	chr22	+	2002	13	FSM	ENSG00000239900.14	ENST00000625194.4	2002	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	347.797314857694	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	40335240	True	NA	NA	False	NA	NA	NA	40346499	40366968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361678_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_63878.known	chr22	+	1808	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_11	315.301718285389	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	40335243	True	NA	NA	False	AGTAAA	-23	NA	40346502	40366996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
transcript_6388.known	chr1	-	861	3	FSM	ENSG00000227712.2	ENST00000653227.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTCCCCGAGTGGCTGA	NA	False	NA	0	True	AATAAA	-21	NA	119327915	119317352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_119317928_119326962_119327140_119327806
transcript_63881.known	chr22	+	4372	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	358.500273753022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	40335240	True	NA	68	True	ATTAAA	-17	NA	40346499	40369425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_63888.known	chr22	+	1805	11	FSM	ENSG00000239900.14	ENST00000623287.4	1805	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	378.089407415759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	40335270	True	NA	NA	False	NA	NA	NA	40346529	40366968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_6389.nnic	chr1	-	1192	2	NNC	ENSG00000227712.2	novel	722	2	NA	NA	-18	-603	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCATTTGTGGTTTCT	-119327014	True	NA	NA	False	AATAAA	-20	NA	119327234	119317955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_119318876_119326962
transcript_63890.known	chr22	+	1336	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	390.808784666926	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	74	True	NA	NA	NA	40346460	40366614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
transcript_63899.known	chr22	+	686	2	FSM	ENSG00000239900.14	ENST00000466863.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGTTAGCCAGGATGG	40335258	True	NA	NA	False	NA	NA	NA	40346517	40350323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831
transcript_639.nic	chr1	+	2284	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_1	24.7469190001503	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578512	True	NA	16	True	AATAAA	-24	NA	6579990	6589280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_6390.known	chr1	+	391	4	FSM	ENSG00000232650.6	ENST00000457683.1	391	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8.01387685344754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCCACTCTGCTTTT	119328168	False	NA	NA	False	NA	NA	NA	119328251	119356182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119328288_119328743_119328790_119354416_119354534_119355990
transcript_63900.known	chr22	+	2851	2	FSM	ENSG00000128285.5	ENST00000249016.5	2115	2	-734	-2	-523	2	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGGATGTTCTTGTG	NA	False	NA	17	True	AATAAA	-29	NA	40678749	40682814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40679735_40680948
transcript_63906.known	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_7	28.66372925842	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814922	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
transcript_63916.known	chr22	-	2058	8	FSM	ENSG00000100372.15	ENST00000263255.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	138.416997894487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814906	True	NA	-2	True	ATTAAA	-18	NA	40819330	40769629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40794513_40794581_40799022_40799084_40819194
transcript_63923.known	chr22	-	2060	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	141.236700455496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814975	True	NA	-2	True	ATTAAA	-18	NA	40819399	40769629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
transcript_63928.nnic	chr22	-	1522	6	NIC	ENSG00000100372.15	novel	2060	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_5	152.966663034793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATATTCTTGAAAA	-40814956	True	NA	-16	True	AATAAA	-11	NA	40819380	40770087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40819194
transcript_6393.known	chr1	+	2053	13	FSM	ENSG00000092621.13	ENST00000641213.1	2053	13	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_3	885.02408943988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675469	True	NA	10	True	AATAAA	-1	NA	119711883	119744201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119724318_119724470_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_63934.known	chr22	-	3212	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	105.175414278219	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	-40815535	True	NA	-5	True	AATATA	-22	NA	40856639	40824534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_63955.known	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	10.4774890970011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	40853287	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_63958.nnic	chr22	+	1160	5	NNC	ENSG00000196236.13	novel	7938	10	NA	NA	1	6768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.0612259880459	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTTCAAGTCTCTTT	40853217	True	NA	NA	False	NA	NA	NA	40857077	40888692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40888428
transcript_63960.known	chr22	+	1418	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	40853236	True	NA	28	True	ATTAAA	-25	NA	40857096	40862770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40857246_40860677_40860794_40861617
transcript_63962.nnic	chr22	+	369	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	4	-949	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATAATACCTCGTATGC	40853220	True	NA	8	True	CATAAA	-18	NA	40857080	40861821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_40857246_40861617
transcript_63963.nnic	chr22	+	1308	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	4	-10	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATGTATTCACTGT	40853220	True	NA	18	True	ATTAAA	-15	NA	40857080	40862760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_40857246_40861617
transcript_63976.known	chr22	+	3189	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_3	21.0916897141979	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	41202761	True	NA	12	True	ATTAAA	-17	NA	41205311	41231271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_63977.known	chr22	-	2530	6	FSM	ENSG00000100399.16	ENST00000216241.14	2530	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.91918358845308	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGGGTTGTATTTAGG	-41240908	False	NA	-2	True	AATAAA	-17	NA	41240931	41229512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41229731_41235144_41235344_41236483_41236651_41237175_41238886_41239442_41239621_41240873
transcript_63979.known	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_15	65.4297248113492	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	-41279838	True	NA	-1	True	CATAAA	-17	NA	41286187	41244778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_63983.nnic	chr22	-	2504	12	NIC	ENSG00000100401.20	novel	3828	16	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	262.833794071054	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-41279864	True	NA	-17	True	AATAAA	-18	NA	41286213	41245610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41285985
transcript_63986.nic	chr22	+	1557	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-40	20509	-40	2795	5prime_fragment	FALSE	canonical	3	12	junction_4	6.58478359553296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAAGCTGCACAATGT	41292179	True	NA	NA	False	NA	NA	NA	41301484	41339638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_63987.nic	chr22	+	2202	8	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-40	20509	-40	2795	intron_retention	FALSE	canonical	3	12	junction_4	7.03054559963673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAAGCTGCACAATGT	41292179	True	NA	NA	False	NA	NA	NA	41301484	41339638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312
transcript_63988.known	chr22	+	5906	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5.86786316999793	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	41292219	True	NA	4	True	AATAAA	-15	NA	41301524	41360147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
transcript_63989.known	chr22	+	2819	19	FSM	ENSG00000100412.17	ENST00000679320.1	2819	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	176.263025961169	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGATTGGTGTCTGT	NA	False	NA	28	True	AAAACA	-25	NA	41469105	41528984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527138_41527203_41527287_41527421_41527900_41528023_41528478
transcript_63990.known	chr22	+	2734	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	45.1025743670234	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGTTCTGTGAGTGAT	41467123	True	NA	18	True	AAAACA	-15	NA	41469116	41528974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_63993.known	chr22	+	1460	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	160.561591582041	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAAGAGATTTCTA	41467123	True	NA	17	True	AATAAA	-32	NA	41469116	41521590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
transcript_63995.nnic	chr22	-	1160	7	NNC	ENSG00000100413.17	novel	4176	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	112.043766250316	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-41540766	True	NA	-30	True	AATAAA	-15	NA	41544504	41528841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544420
transcript_63996.known	chr22	-	4176	7	FSM	ENSG00000100413.17	ENST00000396504.6	4176	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	99.7542814452927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGCTTGTTTTTGGTC	-41540751	True	NA	-5	True	AATAAA	-35	NA	41544489	41525803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544427
transcript_63998.known	chr22	-	1464	6	FSM	ENSG00000100413.17	ENST00000431534.5	1464	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	112.819501860272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTTAAGATCTGAACC	-41540717	True	NA	-31	True	AATAAA	-14	NA	41544455	41528842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532603_41532746_41540698_41540796_41543990
transcript_63999.known	chr22	-	4468	6	FSM	ENSG00000100413.17	ENST00000355209.9	4468	6	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_3	28.203545876361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTTTGGTCGGTGC	-41540732	True	NA	0	True	AATAAA	-40	NA	41544470	41525798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990
transcript_64.known	ERCC-00168	+	1007	1	FSM	ERCC-00168A	DQ516776	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00168_+_0_1000
transcript_64005.known	chr22	-	504	4	FSM	ENSG00000100410.8	ENST00000459687.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	328.209621363475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACCAGGAGTGCCTGC	-41452974	True	NA	NA	False	AAAACA	-39	NA	41468625	41460302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41460488_41467447_41467615_41468019_41468148_41468601
transcript_64007.known	chr22	-	292	4	FSM	ENSG00000100410.8	ENST00000491254.1	292	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	332.808586961868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACGCAAAAAATACGGCT	-41468483	False	NA	NA	False	NA	NA	NA	41468499	41460431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468454
transcript_64008.known	chr22	-	1053	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	42.055518860985	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCCCCATTTAACT	-41453041	True	NA	-22	True	AATAAA	-22	NA	41468692	41459716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
transcript_64009.known	chr22	-	365	2	FSM	ENSG00000286491.2	ENST00000664614.2	399	2	27	7	27	-7	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGGTGGAGTGGTACGT	NA	False	NA	NA	False	AATAAA	-14	NA	41560905	41551709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41551889_41560719
transcript_64010.known	chr22	-	1242	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	11.9965981572669	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-41588826	True	NA	-25	True	ATTAAA	-15	NA	41589840	41576899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
transcript_64011.nnic	chr22	-	1177	7	NIC	ENSG00000100417.12	novel	1242	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	30.523215208537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-41588853	True	NA	-25	True	ATTAAA	-15	NA	41589867	41576899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584526_41584604_41586075_41586194_41589718
transcript_64012.known	chr22	-	1405	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	12.7104506432917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTTTGTCACAGTATT	-41588804	True	NA	-62	True	NA	NA	NA	41589818	41576936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
transcript_64013.nnic	chr22	-	1032	6	NIC	ENSG00000100417.12	novel	1242	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	43.6733328245052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-41588826	True	NA	-25	True	ATTAAA	-15	NA	41589840	41576899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584526_41584604_41589718
transcript_64016.known	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	19.2083315256688	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	-41616672	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_64026.known	chr22	+	2122	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	0	0	0	0	multi-exon	FALSE	canonical	3	4155	junction_1	452.760575678679	5198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	41559240	True	NA	16	True	AATAAA	-22	NA	41621294	41664041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64032.known	chr22	+	2006	13	FSM	ENSG00000196419.13	ENST00000402580.7	2006	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1520.79093091574	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	41559240	True	NA	23	True	AATAAA	-29	NA	41621294	41664048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636235_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64035.known	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1528.91292853961	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559406	False	NA	14	True	AATAAA	-20	NA	41621460	41664039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64045.known	chr22	+	2148	12	FSM	ENSG00000196419.13	ENST00000428575.6	2148	12	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	1539.96224596847	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	41621106	False	NA	23	True	AATAAA	-29	NA	41621162	41664048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621346_41621989_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_6405.known	chr1	+	1774	12	FSM	ENSG00000092621.13	ENST00000641947.1	1774	12	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_10	682.789707833947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATCAATAGGGAGAGAA	119675469	True	NA	-97	True	AAGAAA	-10	NA	119711883	119744094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741877_119742806_119743045_119743885
transcript_6406.known	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	102.554480582778	4820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675519	True	NA	24	True	AATAAA	-15	NA	119711933	119744215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_64064.known	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4868	junction_3	294.393367020139	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559295	True	NA	14	True	AATAAA	-20	NA	41621349	41664039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64069.known	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1146.43573255935	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-41665757	True	NA	-113	True	NA	NA	NA	41688895	41674614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
transcript_64077.known	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_2	302	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	-41665729	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41675196_41680243_41680365_41688793
transcript_64080.known	chr22	-	640	2	FSM	ENSG00000100138.15	ENST00000469522.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATGCTTGGTACAGA	-41665709	True	NA	-22	True	AATAAA	-17	NA	41688847	41687741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41688328_41688793
transcript_64081.nnic	chr22	+	1392	8	NNC	ENSG00000100147.14	novel	7135	7	NA	NA	-53	397	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	37.2662784592731	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCGACCAAGGCTGGTG	41797570	True	NA	NA	False	AATAAA	-16	NA	41800625	41826290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_41800767_41800998_41801077_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_64082.known	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	9.42956343987709	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	41797623	True	NA	11	True	AATAAA	-20	NA	41800678	41832164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_64084.nnic	chr22	-	1208	6	NNC	ENSG00000100162.15	novel	938	6	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	287.758509865477	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940475	False	NA	-19	True	AAAAAG	-12	NA	41946798	41938736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946109_41946211_41946416
transcript_64088.known	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	18.0510387512741	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940829	True	NA	-19	True	AAAAAG	-12	NA	41947152	41938736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_64089.known	chr22	-	818	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	245.549765831694	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	-41940813	True	NA	-31	True	NA	NA	NA	41947136	41938748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_64090.known	chr22	-	1002	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	19.4550764583437	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940370	False	NA	-19	True	AAAAAG	-12	NA	41946693	41938736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
transcript_64091.known	chr22	-	689	4	FSM	ENSG00000100162.15	ENST00000396437.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_2	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATATACACATACTT	-41940828	True	NA	NA	False	AATAAA	-22	NA	41947151	41944920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41945305_41945912_41946006_41946416_41946497_41947019
transcript_64092.known	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	267.08841648829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940365	False	NA	-19	True	AAAAAG	-12	NA	41946688	41938736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
transcript_64093.known	chr22	+	4649	10	FSM	ENSG00000100167.21	ENST00000396425.7	4649	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	13.3869293171814	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	41976283	False	NA	21	True	ACTAAA	-21	NA	41976933	41998221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620
transcript_64094.known	chr22	-	1856	10	FSM	ENSG00000198951.12	ENST00000403363.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	56.7211067471121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-42070820	False	NA	-34	True	NA	NA	NA	42070830	42059795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070367_42070762
transcript_64095.known	chr22	-	1869	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	60.1128568241067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCAGGTCACCAATA	-42070832	False	NA	-40	True	NA	NA	NA	42070842	42059801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
transcript_64098.known	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	11.9732775379175	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	-42069774	True	NA	22	True	NA	NA	NA	42070812	42058333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
transcript_641.nic	chr1	+	2258	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	32.9680148022291	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578517	True	NA	16	True	AATAAA	-24	NA	6579995	6589280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_6580050_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_64101.known	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	42073794	True	NA	8	True	AGTAAA	-16	NA	42074247	42079438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42074342_42075570_42075653_42077279
transcript_64102.known	chr22	+	1562	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	10	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	42079246	False	NA	NA	False	AATAAA	-13	NA	42079699	42084284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42079955_42081924_42082066_42083118
transcript_64104.known	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	318	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	42079237	False	NA	6	True	AATAAA	-15	NA	42079690	42083353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42079906_42081924_42082066_42083118
transcript_64105.known	chr22	-	1183	3	FSM	ENSG00000184983.11	ENST00000617763.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	4072	junction_1	288.5	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-1	True	AATAAA	-24	NA	42090884	42085526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42086315_42087059_42087176_42090605
transcript_64109.nic	chr22	+	822	5	NIC	ENSG00000237037.9	novel	774	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	3.04138126514911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCAGGCTGCCACCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	42090944	42125028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_42091182_42091296_42091601_42124046_42124131_42124519_42124563_42124874
transcript_64112.known	chr22	+	1521	4	FSM	ENSG00000237037.9	ENST00000417327.5	1521	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGGTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	42090955	42125349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42091182_42091296_42091601_42124046_42124563_42124874
transcript_64113.known	chr22	-	780	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	116	0	40	0	multi-exon	FALSE	canonical	3	119	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTTCCATTTCTGT	-42368510	True	NA	-12	True	AATAAA	-18	NA	42369168	42364399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42364726_42368714
transcript_64114.known	chr22	-	475	2	FSM	ENSG00000229891.3	ENST00000412060.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTGTTCCATTTCT	-42368550	True	NA	-14	True	AATAAA	-16	NA	42369208	42364401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42364726_42369057
transcript_64115.known	chr22	+	1346	11	FSM	ENSG00000172250.17	ENST00000359906.7	1385	11	37	2	11	0	multi-exon	FALSE	canonical	2	5	junction_7	3.55527776692624	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTCG	42500435	True	NA	NA	False	AATAAA	-18	NA	42500589	42512560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502393_42502748_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
transcript_64122.known	chr22	-	5419	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_4	411.459495778949	1094	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	-42506293	True	NA	-7	True	AATAAA	-14	NA	42519796	42508343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
transcript_64128.known	chr22	+	1337	12	FSM	ENSG00000183569.18	ENST00000327678.10	1337	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.43852043986392	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	42553801	True	NA	NA	False	AATAAA	-18	NA	42553955	42574382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_64129.nnic	chr22	-	1656	9	NNC	ENSG00000182841.13	novel	2387	8	NA	NA	0	-8	intron_retention	FALSE	canonical	2	14	junction_1	338.731064968951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCGGGTTGGAGGGTAGG	-42578430	True	NA	NA	False	AATAAA	-16	NA	42582038	42555219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_42555803_42556524_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64131.nnic	chr22	-	1539	9	NNC	ENSG00000182841.13	novel	2387	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	14	junction_1	338.731064968951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCGGATCTCACTCACA	-42578430	True	NA	NA	False	AATACA	-25	NA	42582038	42555336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_42555803_42556524_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64135.known	chr22	-	2375	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	11	0	-11	multi-exon	FALSE	canonical	3	109	junction_1	334.148262339474	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCGGGTTGGAGGGT	-42578430	True	NA	NA	False	AATAAA	-13	NA	42582038	42555222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64138.nnic	chr22	-	1034	8	NNC	ENSG00000182841.13	novel	2359	7	NA	NA	0	1471	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	344.023610960003	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCAGTGCTTCGTT	-42578430	True	NA	0	True	TTTAAA	-18	NA	42582038	42571772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_42571884_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64139.nnic	chr22	-	974	8	NNC	ENSG00000182841.13	novel	2359	7	NA	NA	0	1411	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	344.023610960003	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTTGTGTCTGAATTCG	-42578430	True	NA	-1	True	NA	NA	NA	42582038	42571832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_42571884_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64142.known	chr22	-	833	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	37	1489	-4	-353	multi-exon	FALSE	canonical	3	185	junction_5	335.853473341509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGAGAGCCGCAGTGGA	-42578393	True	NA	NA	False	NA	NA	NA	42582001	42574732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64146.known	chr22	-	3362	9	FSM	ENSG00000100227.19	ENST00000252115.10	3362	9	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_6	61.2840466597956	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603018	True	NA	-6	True	AATAAA	-16	NA	42614883	42583720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
transcript_64149.known	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	166.483559278999	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603066	True	NA	-6	True	AATAAA	-16	NA	42614931	42583720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
transcript_64154.known	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_8	91.8925153372134	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-42639713	True	NA	-2	True	AATAAA	-15	NA	42649392	42617839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
transcript_64156.known	chr22	-	2092	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	-42719685	True	NA	-14	True	AATAAA	-16	NA	42720870	42692120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42693998_42695490_42695632_42720796
transcript_64157.known	chr22	-	1956	3	FSM	ENSG00000128274.17	ENST00000381278.4	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	16.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	-42719634	True	NA	-15	True	AATAAA	-15	NA	42720819	42692121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42693998_42695574_42695632_42720796
transcript_64158.known	chr22	-	407	2	FSM	ENSG00000128274.17	ENST00000647439.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTATTTGCATATCT	-42719677	True	NA	NA	False	AATAAA	-25	NA	42720862	42718245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42718587_42720796
transcript_64159.known	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_5	34.5637092916834	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-43007308	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
transcript_64166.known	chr22	-	2728	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	17.899224067602	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-42855786	True	NA	3	True	AATAAA	-41	NA	42857273	42796501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_64167.nic	chr22	-	2597	15	NIC	ENSG00000242247.11	novel	2728	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	28.9352725924606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-42855787	True	NA	3	True	AATAAA	-41	NA	42857274	42796501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_64171.known	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	8.49470423263812	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	-43087966	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
transcript_64173.known	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.0156097709407	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	43110279	True	NA	20	True	AATAAA	-17	NA	43110749	43129712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
transcript_64177.known	chr22	+	836	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	47.9884245301811	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	43149073	True	NA	18	True	AATAAA	-18	NA	43151558	43163242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
transcript_64178.known	chr22	+	636	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	150.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	43149061	True	NA	17	True	AATAAA	-17	NA	43151546	43163241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43151605_43161051_43161191_43162802
transcript_64179.known	chr22	+	859	2	FSM	ENSG00000261251.1	ENST00000563715.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTATATGCAACAGATG	43812267	True	NA	NA	False	NA	NA	NA	43812455	43817394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43812834_43816913
transcript_6418.known	chr1	+	2794	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	104.220727305081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675486	True	NA	10	True	AATAAA	-1	NA	119711900	119744201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
transcript_64180.known	chr22	-	2539	9	FSM	ENSG00000100341.13	ENST00000216177.9	2540	9	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	11.1404387256517	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	-43891629	True	NA	NA	False	AATAAA	-22	NA	43892013	43879678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889539_43889798_43889865_43891061_43891295_43891687
transcript_64186.known	chr22	+	1692	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	0	0	0	0	multi-exon	TRUE	canonical	3	485	junction_8	397.76765472177	1244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	43949491	True	NA	26	True	AATAAA	-17	NA	43955441	43996529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
transcript_6419.known	chr1	+	1780	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_9	713.499376313673	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	119675471	True	NA	21	True	AATAAA	-12	NA	119711885	119744212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
transcript_64198.known	chr22	+	2753	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	9.78519289539046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAAGACAGCTGGG	43922130	True	NA	NA	False	AATAAA	-18	NA	43923804	43947582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_642.known	chr1	+	2347	11	FSM	ENSG00000204859.13	ENST00000377674.9	2347	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	28.8749025972383	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578515	True	NA	16	True	AATAAA	-24	NA	6579993	6589280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_64201.known	chr22	+	2222	9	FSM	ENSG00000100344.11	ENST00000423180.2	2222	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.1143761342085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCGGTTG	43922128	True	NA	70	True	NA	NA	NA	43923802	43947061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43924087_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_64205.nnic	chr22	+	1570	12	NIC	ENSG00000241484.10	novel	1725	13	NA	NA	0	-113	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	131.512498227669	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744905	True	NA	-5	True	NA	NA	NA	44752557	44862671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859679_44859835_44862274
transcript_64207.nnic	chr22	+	1387	11	NIC	ENSG00000241484.10	novel	1725	13	NA	NA	0	-113	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	135.240119786992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744905	True	NA	-5	True	NA	NA	NA	44752557	44862671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64210.nnic	chr22	+	1360	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-7	-113	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	131.675510251527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744914	True	NA	-5	True	NA	NA	NA	44752566	44862671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64211.nnic	chr22	+	1299	10	NIC	ENSG00000241484.10	novel	1725	13	NA	NA	0	-113	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	142.167697881719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744905	True	NA	-5	True	NA	NA	NA	44752557	44862671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64213.known	chr22	+	1725	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.131291105559	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744905	True	NA	108	True	NA	NA	NA	44752557	44862784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64214.nnic	chr22	+	1651	13	NNC	ENSG00000241484.10	novel	1725	13	NA	NA	-18	-101	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_8	162.000750169731	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCATTAGATGAATTCA	44744887	True	NA	7	True	NA	NA	NA	44752539	44862683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44845740_44845843_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64220.known	chr22	+	1615	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	61.6253677507341	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744922	True	NA	108	True	NA	NA	NA	44752574	44862784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64224.known	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	117.379725676967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	44744950	True	NA	112	True	NA	NA	NA	44752602	44862788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
transcript_64225.nic	chr22	+	1461	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-18	-101	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	132.129822523153	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCATTAGATGAATTCA	44744887	True	NA	7	True	NA	NA	NA	44752539	44862683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64226.known	chr22	+	2905	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	38.1307043900837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	44744921	True	NA	NA	False	NA	NA	NA	44752573	44850963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
transcript_64233.nnic	chr22	-	756	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	6.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-45162670	True	NA	-3	True	ACTAAA	-17	NA	45163821	45134289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_45134798_45138823_45138917_45163666
transcript_64236.known	chr22	-	596	2	FSM	ENSG00000226328.7	ENST00000432502.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-45162508	False	NA	-3	True	ACTAAA	-17	NA	45163659	45134289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_45134798_45163571
transcript_64239.known	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	6.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45308117	True	NA	3	True	AATAAA	-14	NA	45309933	45341955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_64243.known	chr22	+	1490	7	FSM	ENSG00000128408.9	ENST00000614167.2	1490	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1.46249406456535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTATTTCTGTGAGG	45413440	True	NA	104	True	AAAACA	-14	NA	45413692	45432509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289_45422409_45425947_45426176_45430899_45431067_45432283
transcript_64244.nic	chr22	+	1463	4	ISM	ENSG00000128408.9	ENST00000614167.2	1490	7	-30	9537	-30	466	5prime_fragment	FALSE	canonical	1	4	junction_2	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	45413662	45422972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289
transcript_64250.known	chr22	+	3294	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_4	72.335535887046	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGTAATGGTTATGT	45658551	True	NA	NA	False	AATAAA	-26	NA	45671833	45845307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_64264.known	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	46013400	True	NA	25	True	CATAAA	-19	NA	46013605	46015498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46013811_46014496
transcript_64271.nic	chr22	-	1505	4	NIC	ENSG00000205643.11	novel	1489	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	47.4154217762768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGACTTTAAGATGCTCA	-46248823	True	NA	-10	True	AATAAA	-24	NA	46250322	46244010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_46245239_46247124_46247222_46248171_46248285_46250255
transcript_64272.known	chr22	-	1489	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	23.8932812499432	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-46248794	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
transcript_64274.known	chr22	-	498	3	FSM	ENSG00000205643.11	ENST00000474256.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	49	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGGGTAGTCCAAAGG	-46248812	True	NA	NA	False	NA	NA	NA	46250311	46244908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46247109_46247222_46250255
transcript_64278.known	chr22	-	655	2	FSM	ENSG00000205643.11	ENST00000475605.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGGATAGAATTTTTA	-46248795	True	NA	-106	True	NA	NA	NA	46250294	46244622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46250255
transcript_64279.known	chr22	-	1439	3	FSM	ENSG00000205643.11	ENST00000404583.5	1439	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	58	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGACTTTAAGATGCTCA	-46246786	False	NA	-10	True	AATAAA	-24	NA	46248285	46244010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46247124_46247222_46248171
transcript_6428.known	chr1	+	1638	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_8	739.310188997525	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675483	True	NA	24	True	AATAAA	-15	NA	119711897	119744215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
transcript_64280.known	chr22	-	1600	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	51.5388203202208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	-46248790	True	NA	-20	True	AATAAA	-14	NA	46250289	46244020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
transcript_64281.known	chr22	+	2566	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_13	15.9351496410558	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	46265302	True	NA	10	True	ATTAAA	-23	NA	46268007	46294008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
transcript_64283.known	chr22	-	1518	1	FSM	ENSG00000277232.2	ENST00000623117.1	1518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCGTCAGGTATTTCTT	-46296606	True	NA	NA	False	ATTAAA	-16	NA	46296660	46295142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46295100_46296700
transcript_64284.known	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	64.9816248661722	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	46294193	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_64296.known	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_4	89.1383194815787	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	46329596	True	NA	14	True	AATAAA	-17	NA	46335713	46357340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64300.known	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	99.991249617154	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64310.known	chr22	+	1258	11	FSM	ENSG00000100416.15	ENST00000644006.1	1258	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	135.969261232089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGGCCTGAGTCCCTT	46335823	False	NA	NA	False	NA	NA	NA	46335950	46356979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64312.known	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	137.386721014482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	46329627	True	NA	NA	False	NA	NA	NA	46335744	46357184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_64321.known	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	101.647660639979	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64323.known	chr22	+	1775	10	FSM	ENSG00000100416.15	ENST00000453630.5	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	112.296235219372	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64324.known	chr22	+	1793	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	117.65780052632	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	46335357	False	NA	9	True	AATAAA	-12	NA	46335400	46357335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64332.known	chr22	+	1688	9	FSM	ENSG00000100416.15	ENST00000456595.5	1688	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	159.849880747531	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_64344.known	chr22	+	1476	2	FSM	ENSG00000100416.15	ENST00000476901.1	1476	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	46330863	False	NA	15	True	AATAAA	-16	NA	46330874	46333699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46331733_46333081
transcript_64345.known	chr22	+	591	2	FSM	ENSG00000100416.15	ENST00000493556.2	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCCCAGTTAGGA	46335645	False	NA	NA	False	NA	NA	NA	46335688	46338211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778
transcript_64346.known	chr22	-	670	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	-46760954	True	NA	-8	True	AATAAA	-32	NA	46762563	46761893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46761900_46762600
transcript_64349.known	chr22	+	3758	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	14.7843291660085	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	46759937	True	NA	6	True	AATAAA	-14	NA	46762649	47175693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_64352.known	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.3402197828378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	46759959	True	NA	19	True	AATAAA	-13	NA	46762671	47174083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_64353.nnic	chr22	+	1595	10	NIC	ENSG00000054611.14	novel	1949	12	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42.1675084091069	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	46759915	True	NA	19	True	AATAAA	-13	NA	46762627	47174083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_46762849_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_64356.known	chr22	-	1594	4	FSM	ENSG00000260613.2	ENST00000666898.1	1594	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTGCTCTGAACATTC	NA	False	NA	NA	False	AATAAA	-20	NA	49838901	49832448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_49833688_49837291_49837392_49837507_49837553_49838691
transcript_64358.known	chr22	-	5330	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	24.6671671620896	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCTTTCCTAGACGG	-49915651	True	NA	-16	True	GATAAA	-14	NA	49918438	49900228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_64360.nic	chr22	-	2346	9	NIC	ENSG00000182858.14	novel	5330	10	NA	NA	109	434	intron_retention	FALSE	canonical	3	136	junction_2	25.0021874043052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACAGAAAATAATGAGA	-49915542	True	NA	-38	True	AATAAA	-21	NA	49918329	49903215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_64361.known	chr22	+	1577	11	FSM	ENSG00000184164.15	ENST00000404488.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	211.095736574664	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGGTTTGTCTCAT	49913855	True	NA	41	True	AATAAA	-31	NA	49918634	49927540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922296_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_64364.nic	chr22	+	1692	11	NIC	ENSG00000170638.10	novel	1628	10	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	154.021719247644	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAATAAATTCTAATTT	50179465	True	NA	-10	True	NA	NA	NA	50185899	50199569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344_50198516_50199115
transcript_64367.known	chr22	+	2305	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	72.8755069016528	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179478	True	NA	16	True	AATAAA	-16	NA	50185912	50199595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_64369.known	chr22	+	2329	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	124.403862430611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGACGTGTGAAC	50179482	True	NA	19	True	AATAAA	-19	NA	50185916	50199598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_64371.known	chr22	+	2172	10	FSM	ENSG00000170638.10	ENST00000395827.5	2172	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	154.163533501696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGCCGACTCGGT	50190456	False	NA	NA	False	NA	NA	NA	50190597	50199475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50190649_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_64374.nic	chr22	+	2397	9	NIC	ENSG00000170638.10	novel	2305	10	NA	NA	-13	0	intron_retention	FALSE	canonical	3	279	junction_1	74.5166717922909	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179465	True	NA	16	True	AATAAA	-16	NA	50185899	50199595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_64376.known	chr22	+	2404	9	FSM	ENSG00000170638.10	ENST00000463233.1	2404	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	131.291660055009	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179483	True	NA	16	True	AATAAA	-16	NA	50185917	50199595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_64378.known	chr22	-	2019	11	FSM	ENSG00000188130.14	ENST00000467891.5	2019	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	65.9476307383366	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTGTAGCTCCCTGT	-50260676	True	NA	-21	True	NA	NA	NA	50261708	50252919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166
transcript_64383.known	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	33.1885415458533	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-50505023	True	NA	-4	True	AATAAA	-20	NA	50507702	50502948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_64391.known	chr22	+	1996	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	0	0	0	multi-exon	TRUE	canonical	2	31	junction_15	58.3235791871236	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	50507492	True	NA	18	True	AATAAA	-18	NA	50508259	50523472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
transcript_64395.known	chr22	+	1388	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	11.9419167222017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	50507475	True	NA	4	True	ATTAAA	-16	NA	50508242	50519752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
transcript_64397.known	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-50524282	True	NA	-4	True	ATTAAA	-15	NA	50525598	50523567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50524425_50525471
transcript_64399.known	chr22	-	462	3	FSM	ENSG00000217442.4	ENST00000406915.4	462	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGGACCTCTTCTCTC	-50562805	True	NA	-2	True	AATAAA	-17	NA	50562919	50551111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50551403_50556296_50556406_50562857
transcript_64402.known	chr22	-	1474	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	105.324071322751	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580442	True	NA	29	True	AATAAA	-18	NA	50582849	50578962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_64403.known	chr22	-	1856	10	FSM	ENSG00000100288.20	ENST00000481673.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_9	97.0987787745354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580438	True	NA	29	True	AATAAA	-18	NA	50582845	50578962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_64410.known	chr22	-	624	5	FSM	ENSG00000100288.20	ENST00000464225.5	624	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	179.58284996068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580136	False	NA	29	True	AATAAA	-18	NA	50580253	50578962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189
transcript_64411.known	chr22	-	1895	9	FSM	ENSG00000100299.18	ENST00000356098.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	16.9036793332103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCAATCCTGGGGTAA	-50627541	True	NA	-7	True	NA	NA	NA	50628170	50625017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627945
transcript_64412.known	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	17.0772554311641	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-50627523	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
transcript_64413.known	chr22	-	1650	8	FSM	ENSG00000100299.18	ENST00000453344.6	1650	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	8.08374534331149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTGACAATTCGTCCAA	-50627544	True	NA	-18	True	NA	NA	NA	50628173	50625028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627945
transcript_64418.known	chr22	-	1824	9	FSM	ENSG00000100299.18	ENST00000395619.3	1824	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	18.417043736713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGATGTGACAATTCGT	-50627530	True	NA	-22	True	NA	NA	NA	50628159	50625032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627990
transcript_64422.known	chr22	-	2401	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	58.0880557621119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780293	True	NA	-30	True	AGTAAA	-17	NA	50783636	50767505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
transcript_64425.known	chr22	-	2169	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	55.9540827375447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780316	True	NA	-30	True	AGTAAA	-17	NA	50783659	50767505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_64428.known	chr22	-	2140	9	FSM	ENSG00000079974.19	ENST00000354869.8	2153	9	15	-2	9	2	multi-exon	FALSE	canonical	3	41	junction_8	49.9324543758866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAAATGTATGTGCTT	-50780278	True	NA	-28	True	AGTAAA	-19	NA	50783621	50767503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_64435.nic	chr22	+	594	4	FSM	ENSG00000184319.17	ENST00000690147.1	570	4	-28	4	-4	0	multi-exon	FALSE	canonical	1	1	junction_3	77.1765652398591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	50780502	True	NA	NA	False	ATTAAA	-28	NA	50783735	50789186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788749_50788799_50788891
transcript_64436.nic	chr22	+	577	4	FSM	ENSG00000184319.17	ENST00000693416.1	731	4	-28	182	-4	-7	multi-exon	FALSE	canonical	2	4	junction_3	76.2860115326234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	50780502	True	NA	NA	False	ATTAAA	-14	NA	50783735	50789172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788749_50788799_50788894
transcript_64437.known	chr22	+	658	4	FSM	ENSG00000184319.17	ENST00000423888.6	732	4	2	72	2	-7	multi-exon	FALSE	canonical	2	4	junction_3	44.3946943776944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	50780578	True	NA	NA	False	ATTAAA	-14	NA	50783811	50789172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788894
transcript_6444.known	chr1	+	1180	5	FSM	ENSG00000092621.13	ENST00000641573.1	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	84.8071341338687	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	119675520	True	NA	NA	False	ACTAAA	-17	NA	119711934	119727684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003
transcript_64447.nic	chr22	+	687	3	FSM	ENSG00000184319.17	ENST00000689105.1	836	3	-19	168	-4	0	multi-exon	FALSE	canonical	3	32	junction_2	73	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	50780502	True	NA	NA	False	ATTAAA	-28	NA	50783735	50789186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788749
transcript_64448.nnic	chr22	+	542	3	FSM	ENSG00000184319.17	ENST00000690407.1	509	3	-33	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	88.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	50780502	True	NA	NA	False	ATTAAA	-28	NA	50783735	50789186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788894
transcript_64449.known	chr22	+	1009	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	17	105	2	0	multi-exon	FALSE	canonical	3	178	junction_1	46.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	50780523	True	NA	NA	False	AAGAAA	-20	NA	50783756	50799434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50798654
transcript_64455.known	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	109	junction_1	81	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	50780616	True	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784022_50785172_50785294_50798654
transcript_64461.known	chr22	+	2987	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	96	0	-13	0	multi-exon	FALSE	canonical	3	25	junction_1	123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGACTCAGGTATTT	50780628	False	NA	NA	False	ATTAAA	-20	NA	50783861	50801309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784073_50785172_50785294_50798654
transcript_64465.nnic	chr22	+	1285	3	FSM	ENSG00000184319.17	ENST00000687360.1	1541	3	0	256	0	0	multi-exon	FALSE	canonical	3	16	junction_1	127.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTTTCATAAGAATG	50780551	True	NA	59	True	CATAAA	-5	NA	50783784	50799178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784425_50785172_50785294_50798654
transcript_64467.known	chr22	-	2049	8	FSM	ENSG00000079974.19	ENST00000436958.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	86.3545137257823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATTACA	-50780295	True	NA	-54	True	NA	NA	NA	50783638	50767529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769424_50769553_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_64471.known	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	89.8047326147125	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175671	True	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
transcript_6448.known	chr1	-	6927	5	FSM	ENSG00000265808.4	ENST00000578049.4	6927	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	11.9687092035858	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGGTCCCCTTCTGTT	-120171624	True	NA	NA	False	TATAAA	-40	NA	120176520	120150897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120157193_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_64481.known	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.576118216779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175635	True	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_64490.known	chr3	+	2180	8	FSM	ENSG00000072756.17	ENST00000280591.10	2180	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	71.0487041918918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123332	True	NA	68	True	AATAAA	-15	NA	3126951	3149023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146564_3147449_3147704_3147905
transcript_64491.known	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	32.8757711168972	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123320	True	NA	68	True	AATAAA	-15	NA	3126939	3149023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_64498.known	chr3	+	1113	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	71.6645348520142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	3123343	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
transcript_64502.known	chr3	-	878	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	39.054449170357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTATCCTTGTTATT	-3175635	True	NA	NA	False	AATAAA	-13	NA	3179674	3167429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_64503.known	chr3	-	1012	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.763756397577	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTGTGACATTTAGA	-3175662	True	NA	2	True	AATAAA	-25	NA	3179701	3172175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_64505.known	chr3	+	854	4	FSM	ENSG00000072756.17	ENST00000420393.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.80929264637478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGGGAGCTTTTAAAG	3123360	True	NA	NA	False	NA	NA	NA	3126979	3130214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3127290_3127945_3128019_3129013_3129189_3129918
transcript_64506.known	chr3	+	987	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	52	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3123320	True	NA	2	True	AATAAA	-13	NA	3126939	3130679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3129918
transcript_64508.known	chr3	+	2147	7	FSM	ENSG00000072756.17	ENST00000650839.1	2147	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	80.342496019645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATATTCTCTAAAGA	3125394	False	NA	0	True	ATTAAA	-14	NA	3129013	3148955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146415_3146624_3147449_3147704_3147905
transcript_64509.known	chr3	-	2147	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	12.8251461979971	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCGTCATCAGCTTCT	-4464923	True	NA	-10	True	AATAAA	-19	NA	4467269	4361145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_64510.known	chr3	+	1657	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.8738502225228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302581	True	NA	8	True	AATAAA	-16	NA	4303370	4317265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
transcript_64511.known	chr3	+	2443	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-65	-302	-28	302	multi-exon	FALSE	canonical	3	40	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303303	4317567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897_4313762_4316211
transcript_64513.known	chr3	+	1359	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302547	True	NA	8	True	AATAAA	-16	NA	4303336	4317265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4313646_4313762_4316211
transcript_64516.nnic	chr3	+	1338	3	NIC	ENSG00000170364.13	novel	1676	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302548	True	NA	8	True	AATAAA	-16	NA	4303337	4317265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303527_4313666_4313762_4316211
transcript_64517.nnic	chr3	+	1233	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-36	-52	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGGTTC	NA	False	NA	14	True	AATAAA	-26	NA	4303295	4317213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303527_4316211
transcript_64518.nnic	chr3	+	1285	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	NA	False	NA	8	True	AATAAA	-16	NA	4303295	4317265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303527_4316211
transcript_64520.known	chr3	+	1671	2	FSM	ENSG00000170364.13	ENST00000430981.1	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTCCTACTTAATT	4302571	True	NA	13	True	AATAAA	-25	NA	4303360	4314402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897
transcript_64522.known	chr3	+	3152	5	FSM	ENSG00000134107.5	ENST00000256495.4	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGTCAACCTGGCAGG	4979231	True	NA	NA	False	NA	NA	NA	4979436	4985323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4979799_4979961_4980032_4980300_4980409_4981391_4981516_4982835
transcript_64525.known	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	17.6414914965323	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	5117366	True	NA	11	True	AATAAA	-16	NA	5122291	5180911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_64530.known	chr3	+	1641	7	FSM	ENSG00000134108.14	ENST00000455168.5	1641	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.4096271801404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGACTTTTTATATC	5117366	True	NA	12	True	ATTAAA	-25	NA	5122291	5179646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_5122589_5170502_5170557_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_64531.known	chr3	+	668	2	FSM	ENSG00000189229.12	ENST00000660158.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTTTATGTATTTAC	6490364	True	NA	NA	False	GATAAA	-14	NA	6490459	6558041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_6490673_6557586
transcript_64537.known	chr3	+	8284	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	5.98665181883831	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTCCAGAGGGTTTT	8500850	True	NA	NA	False	AATAAA	-16	NA	8501822	8574668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_64538.known	chr3	+	1059	5	FSM	ENSG00000071282.12	ENST00000456506.2	1059	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.0283907719107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGTGGTGGTAGATCC	8500915	True	NA	NA	False	AATATA	-31	NA	8501887	8567764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_8501981_8532736_8532826_8548567_8548904_8565431_8565648_8567439
transcript_64539.known	chr3	+	1113	5	FSM	ENSG00000071282.12	ENST00000454244.4	1113	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.2148598915231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAGGATCCCACCGAG	8500885	True	NA	NA	False	NA	NA	NA	8501857	8567621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_8501981_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_64540.known	chr3	-	5857	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	22.2015702647858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTAGTAAGTGCCT	-8959925	True	NA	-4	True	AATAAA	-14	NA	8963472	8877074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_64547.known	chr3	-	592	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	8.64098759787715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCCTGCCCAAGCCC	-8959896	True	NA	NA	False	NA	NA	NA	8963443	8946951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
transcript_64548.known	chr3	+	3754	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	80.2745289615579	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358007	True	NA	21	True	AATAAA	-21	NA	9363053	9386791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_64552.known	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	83.8841058239077	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358005	True	NA	21	True	AATAAA	-21	NA	9363051	9386791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_64555.nnic	chr3	+	1946	10	NNC	ENSG00000134077.16	novel	3961	10	NA	NA	0	-79	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	116.29379567965	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTAAGGCTCTTCATC	9358004	True	NA	33	True	AAAAAG	-33	NA	9363050	9384791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_9363317_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_64556.nnic	chr3	+	2025	10	NNC	ENSG00000134077.16	novel	2390	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	116.29379567965	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	9358004	True	NA	5	True	TTTAAA	-18	NA	9363050	9384870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_9363317_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_6456.nnic	chr1	-	1299	4	NIC	ENSG00000265808.4	novel	6927	5	NA	NA	67	942	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	57.9789233735463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTCTCATTTACTCCT	-120171557	True	NA	NA	False	NA	NA	NA	120176453	120156348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_120157193_120160383_120160531_120163209_120163371_120176306
transcript_64572.known	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.3618495915476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397372	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
transcript_64578.nic	chr3	-	598	5	FSM	ENSG00000206573.10	ENST00000685076.1	550	5	-53	5	0	0	multi-exon	FALSE	canonical	3	50	junction_2	23.466731770743	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9395092	True	NA	-4	True	ATTAAA	-16	NA	9397495	9385794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9397423
transcript_64579.nic	chr3	-	572	5	NIC	ENSG00000206573.10	novel	550	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	40.3050865276332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9395092	True	NA	-4	True	ATTAAA	-16	NA	9397495	9385794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9385924_9388086_9388128_9390289_9390498_9391704_9391827_9397423
transcript_64587.nic	chr3	+	579	4	ISM	ENSG00000134077.16	ENST00000452837.7	3754	10	-23	15633	-20	59	5prime_fragment	FALSE	canonical	3	167	junction_1	113.10467128579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAGCGCAAAAAGATAAA	9357984	True	NA	-62	True	AAAAAG	-7	NA	9363030	9371158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059
transcript_64590.known	chr3	-	667	4	FSM	ENSG00000206573.10	ENST00000467069.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	45.5192267069642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGATCTTGAATAGTG	-9397373	False	NA	NA	False	NA	NA	NA	9397429	9389491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9389797_9390289_9390498_9391678_9391827_9397423
transcript_64594.known	chr3	-	1897	4	FSM	ENSG00000206573.10	ENST00000481221.7	1897	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	32.2628096868343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395071	True	NA	-30	True	TATAAA	-37	NA	9397474	9388873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391678_9391827_9395505_9395580_9397423
transcript_64597.nic	chr3	-	754	4	NIC	ENSG00000206573.10	novel	1968	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	14.522013940528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	-9397441	False	NA	-3	True	AATAAA	-15	NA	9397497	9390013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9390498_9391704_9391827_9395505_9395580_9397423
transcript_64598.known	chr3	-	608	3	FSM	ENSG00000254485.5	ENST00000517846.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	-9362726	True	NA	NA	False	AATAAA	-19	NA	9363006	9349684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9350067_9355800_9355860_9362839
transcript_64599.known	chr3	-	1878	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTGGTTGAATCTG	-9397448	False	NA	-5	True	ATTAAA	-19	NA	9397504	9388848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391678_9391827_9397423
transcript_64608.nic	chr3	-	1448	3	ISM	ENSG00000206573.10	ENST00000667458.1	2100	4	13	1132	0	0	5prime_fragment	FALSE	canonical	2	7	junction_1	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTTCATTTAAGAATG	-9395036	True	NA	3	True	AATAAA	-21	NA	9397439	9390007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_9390498_9390884_9391827_9397423
transcript_64609.known	chr3	-	2095	3	FSM	ENSG00000206573.10	ENST00000664441.2	2116	3	0	21	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395091	True	NA	-30	True	TATAAA	-37	NA	9397494	9388873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391426_9391827_9397423
transcript_6461.known	chr1	-	2230	2	FSM	ENSG00000265808.4	ENST00000618538.1	2230	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGTTGCAGTGCTGCT	-120160488	False	27	-1	True	AATAAA	-19	NA	120160501	120157290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120159403_120160383
transcript_64610.nnic	chr3	-	894	3	NNC	ENSG00000206573.10	novel	731	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	51.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	-9395092	True	NA	-3	True	AATAAA	-15	NA	9397495	9390013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_9390498_9391488_9391827_9397423
transcript_64612.known	chr3	-	583	3	FSM	ENSG00000206573.10	ENST00000489616.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTAAGTATAAACATAAG	-9396578	False	NA	NA	False	TTTAAA	-19	NA	9396634	9390137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391678_9391827_9396559
transcript_64617.known	chr3	-	1809	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATTGTATTAAATATT	-9395092	True	NA	-39	True	TATAAA	-28	NA	9397495	9388882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391704_9391827_9397423
transcript_64619.known	chr3	-	670	3	FSM	ENSG00000206573.10	ENST00000518437.3	1968	3	0	1298	0	35	multi-exon	FALSE	canonical	1	5	junction_2	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGAGTGAGACCTTGC	-9397448	False	NA	NA	False	NA	NA	NA	9397504	9391311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9391827_9395505_9395580_9397423
transcript_64621.known	chr3	-	484	2	FSM	ENSG00000254485.5	ENST00000466431.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	-9362919	False	NA	NA	False	AATAAA	-19	NA	9362941	9349684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9350067_9362839
transcript_64622.known	chr3	-	1831	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1161	1	0	multi-exon	FALSE	canonical	3	113	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	-9395038	True	NA	-3	True	AATAAA	-15	NA	9397441	9390013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9391827_9397423
transcript_64629.nic	chr3	+	1848	17	ISM	ENSG00000144550.14	ENST00000383832.8	2042	21	1401	0	1401	0	3prime_fragment	TRUE	canonical	0	0	junction_1	12.272778566812	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	9704718	True	NA	4	True	AATAAA	-17	NA	9705233	9729908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_9705501_9705717_9705721_9705986_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
transcript_6463.known	chr1	-	715	3	FSM	ENSG00000223804.5	ENST00000616141.4	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	-120341836	False	NA	NA	False	AATAAA	-34	NA	120341871	120267333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120267839_120340755_120340811_120341716
transcript_64632.nic	chr3	+	1525	16	NNC	ENSG00000144550.14	novel	1751	21	NA	NA	1426	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.7669712757394	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCATTAGATTGTGATA	9704743	True	NA	NA	False	AATAAA	-17	NA	9705258	9727450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_9705502_9705984_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9727346
transcript_64633.nnic	chr3	+	1743	15	NIC	ENSG00000144550.14	novel	2042	21	NA	NA	1426	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.7516824674736	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	9704743	True	NA	4	True	AATAAA	-17	NA	9705258	9729908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_9705501_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
transcript_64637.known	chr3	-	1974	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	26.2270733212839	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	-9792461	False	NA	-3	True	AATAAA	-27	NA	9792473	9779966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_64638.nic	chr3	-	1299	9	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	238.900574245857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836663	True	NA	-13	True	AATAAA	-14	NA	9844043	9837848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9838208_9838984_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_6464.known	chr1	-	625	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	-120341804	False	NA	NA	False	AATAAA	-31	NA	120341839	120267336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120267839_120341716
transcript_64646.known	chr3	-	1225	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	72.9373661095601	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836636	True	NA	-13	True	AATAAA	-14	NA	9844016	9837848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_64656.nic	chr3	-	1088	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	245.06950284458	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836636	True	NA	-13	True	AATAAA	-14	NA	9844016	9837848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843889
transcript_64657.known	chr3	-	1178	8	FSM	ENSG00000156990.14	ENST00000433535.6	1178	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	247.281629082374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836634	True	NA	-13	True	AATAAA	-14	NA	9844014	9837848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9843464_9843602_9843889
transcript_64662.known	chr3	-	1005	8	FSM	ENSG00000156990.14	ENST00000424438.5	1005	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	332.497659958008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCCTCCCTCTGTTCCT	-9836562	True	NA	NA	False	GGGGCT	-10	NA	9843942	9838019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843724
transcript_64664.nic	chr3	-	1112	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	246.775614843997	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836663	True	NA	-13	True	AATAAA	-14	NA	9844043	9837848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_64666.known	chr3	+	1655	7	FSM	ENSG00000114026.22	ENST00000302003.11	1655	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	58.4009132348687	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	NA	False	NA	16	True	AATAAA	-23	NA	9749943	9757407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757043
transcript_64667.known	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	43.4766859618143	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	9749026	True	NA	16	True	AATAAA	-23	NA	9749951	9757407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
transcript_64668.known	chr3	+	2220	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	59.4467548876023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	NA	False	NA	94	True	NA	NA	NA	9749943	9766737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
transcript_64669.known	chr3	+	957	7	FSM	ENSG00000241553.13	ENST00000417500.5	957	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	367.372389030834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGGGCCGGGACAGA	9781246	True	NA	-56	True	NA	NA	NA	9793081	9806436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9793125_9797658_9797778_9799878_9800068_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_64675.known	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	22.8175371151227	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	9749055	False	NA	-14	True	NA	NA	NA	9749980	9757377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
transcript_64679.known	chr3	+	942	6	FSM	ENSG00000241553.13	ENST00000498623.6	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	316.141107735138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGGACAGATTTTTT	9790651	True	NA	-50	True	NA	NA	NA	9792494	9806442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9792706_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_64681.known	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	169.624762343238	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	9781246	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_64682.known	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	320.909083698171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	9781281	True	NA	80	True	TTTAAA	-33	NA	9793116	9806572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_64687.known	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	79.5561908339005	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	NA	False	NA	25	True	AATAAA	-33	NA	9749943	9766668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
transcript_6469.nnic	chr1	-	788	4	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-141	1517	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	-121052262	True	NA	NA	False	AATAAA	-16	NA	121052308	121028074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_121028292_121036413_121036466_121037561_121037798_121052025
transcript_64694.known	chr3	+	1069	4	FSM	ENSG00000114026.22	ENST00000383826.9	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	89.4886709154976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGCTTACTAGCACTT	9750002	False	NA	NA	False	NA	NA	NA	9750086	9766112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9765808
transcript_64697.known	chr3	-	1178	4	FSM	ENSG00000156990.14	ENST00000433972.1	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_3	48.4722142629729	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTGTGCAGTCATTT	NA	False	NA	-5	True	AATAGA	-15	NA	9844059	9841256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
transcript_64700.known	chr3	-	807	3	FSM	ENSG00000156990.14	ENST00000433555.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	405	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGGCAGCTGCAATA	-9836596	True	NA	NA	False	NA	NA	NA	9843976	9841407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9842083_9842198_9842244_9843889
transcript_64701.known	chr3	-	336	1	FSM	ENSG00000269886.1	ENST00000602768.1	336	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGCTAATATTTATTG	NA	False	NA	NA	False	AATAAA	-24	NA	9813097	9812761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9812800_9813100
transcript_64702.known	chr3	-	955	7	FSM	ENSG00000156990.14	ENST00000418713.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	58.54343117151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCACTCCAGTCTAGG	-9836622	True	NA	NA	False	NA	NA	NA	9844002	9839940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_64703.known	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	9885218	True	NA	11	True	ATTAAA	-25	NA	9890609	9894349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9890812_9892914
transcript_64704.known	chr3	+	1313	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGTTGCTTGAAA	9885182	True	NA	64	True	GGGGCT	-12	NA	9890573	9893883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9890812_9892808
transcript_64707.nic	chr3	+	1998	12	NIC	ENSG00000163703.20	novel	2078	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_10	56.5546616298437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	9933755	False	NA	15	True	AATAAA	-23	NA	9933783	9945032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_64709.known	chr3	+	1994	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_10	59.804917015021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	9932541	True	NA	15	True	AATAAA	-23	NA	9933855	9945032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_6471.known	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	32.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913168	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_120913451_120952438_120952626_120953222
transcript_64711.known	chr3	+	1917	11	FSM	ENSG00000163703.20	ENST00000673737.2	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	53.1748060645265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCATGCCAGCTGTCAT	9932510	True	NA	NA	False	NA	NA	NA	9933824	9945196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941017_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_64714.known	chr3	+	2093	11	FSM	ENSG00000163703.20	ENST00000674067.2	2093	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	56.4680440603356	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	9932529	True	NA	-2	True	AATAAA	-12	NA	9933843	9945385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938018_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_64715.known	chr3	+	2196	11	FSM	ENSG00000163703.20	ENST00000452070.6	2196	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41.6130988992649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGCAACCTTTCCTC	9932519	True	NA	19	True	AATAAA	-33	NA	9933833	9945406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_64716.known	chr3	+	2020	10	FSM	ENSG00000163703.20	ENST00000673935.2	2020	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	54.7995223913584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATATTCAATAAAAGTG	9932495	True	NA	-29	True	ATTAAA	-36	NA	9933809	9945358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9943076_9943173_9943380_9943516_9944364
transcript_64719.known	chr3	+	2198	2	FSM	ENSG00000163703.20	ENST00000684659.1	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCATTTTCTCTTTT	9932524	True	NA	5	True	AATAAA	-19	NA	9933838	9936258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9934613_9934834
transcript_6472.known	chr1	+	821	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	120913205	False	NA	NA	False	AATAAA	-31	NA	120913220	120953463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_120913451_120952438_120952786_120953219
transcript_64720.known	chr3	+	1802	5	FSM	ENSG00000163703.20	ENST00000683891.1	1802	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	72.8229874421532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCATCTCAAAAAAAAA	9932535	True	NA	NA	False	NA	NA	NA	9933849	9941778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9940849_9941027_9941110
transcript_64722.known	chr3	+	614	4	FSM	ENSG00000230082.1	ENST00000431558.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACCACTGGTTTATTG	9947388	False	NA	2	True	AGTAAA	-16	NA	9947403	9954787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9947605_9948066_9948181_9948354_9948470_9954603
transcript_64723.known	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-9951105	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9948914_9949100_9950173_9952321
transcript_64724.known	chr3	-	3368	5	FSM	ENSG00000163704.12	ENST00000295984.7	3368	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	19.4550764583437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9951089	True	NA	-7	True	AATAAA	-15	NA	9952374	9945541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9945712_9946084_9948002_9948757_9948914_9949100_9950173_9952321
transcript_64726.nic	chr3	-	1201	9	FSM	ENSG00000125037.13	ENST00000693754.1	1421	9	-17	237	-17	0	multi-exon	FALSE	canonical	1	4	junction_8	182.910454526252	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCAGGCATGCAGCAAG	-9984679	True	NA	-15	True	AATAAA	-16	NA	9986860	9963966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9981633_9981748_9986506
transcript_64728.known	chr3	-	2777	8	FSM	ENSG00000125037.13	ENST00000245046.7	2353	8	-279	-145	-277	145	multi-exon	FALSE	canonical	3	395	junction_7	25.0420055270405	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	9987120	9962536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
transcript_64729.known	chr3	-	1909	7	FSM	ENSG00000125037.13	ENST00000487465.5	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	26.289520514625	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGCCTGATAAAGGA	-9984657	True	NA	NA	False	AAAAAG	-8	NA	9986838	9968643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
transcript_64736.nnic	chr3	+	687	4	FSM	ENSG00000180385.9	ENST00000693066.1	671	4	-20	4	0	-4	multi-exon	FALSE	canonical	3	24	junction_1	12.2836838484589	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGGTTCTTGCAAATC	9983561	True	NA	18	True	AATAAA	-16	NA	9986884	10006986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9987265_9987814_9987906_9988711_9988748_10006806
transcript_64747.known	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	2	3	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-10025592	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10015527_10023559_10023748_10026040
transcript_64748.known	chr3	-	854	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	18	264	9	-263	multi-exon	FALSE	canonical	2	6	junction_1	15.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTGGCCAAAGGAGAA	-10025592	True	NA	NA	False	GGGGCT	-12	NA	10026357	10017752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10018072_10023529_10023748_10026040
transcript_64749.known	chr3	-	1088	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	12	1	-7	multi-exon	FALSE	canonical	3	15	junction_1	11	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATCTTTGCCTGTGT	-10025600	True	NA	-8	True	AATAAA	-11	NA	10026365	10017496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10018072_10023559_10023748_10026040
transcript_64750.known	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	-10025561	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10023748_10026040
transcript_64751.known	chr3	+	5096	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	18.2313419148219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	10017827	True	NA	18	True	AATAAA	-18	NA	10026436	10101932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_64752.known	chr3	+	5219	43	FSM	ENSG00000144554.13	ENST00000287647.7	5219	43	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_1	18.3535602705081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGAGAATCACTTGAAC	10017804	True	NA	NA	False	NA	NA	NA	10026413	10099660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719
transcript_64755.nic	chr3	+	1749	17	ISM	ENSG00000144554.13	ENST00000287647.7	5219	43	0	50044	0	112	5prime_fragment	FALSE	canonical	3	68	junction_1	16.9921857040229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGTTAATTCATTCA	10017804	True	NA	NA	False	AATAAA	-15	NA	10026413	10049616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373
transcript_64756.nic	chr3	+	936	10	NIC	ENSG00000144554.13	novel	5219	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	39.5496250235849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTATTGTACTAGAA	10017804	True	NA	NA	False	AATAAA	-17	NA	10026413	10040684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10040536
transcript_64757.nnic	chr3	+	1375	9	NNC	ENSG00000144554.13	novel	5096	44	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	44.5245718676777	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	10017786	True	NA	16	True	AATAAA	-16	NA	10026395	10101930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10026474_10090335_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_6476.nnic	chr1	-	736	3	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-141	1517	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	-121052262	True	NA	NA	False	AATAAA	-16	NA	121052308	121028074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_121028292_121037561_121037798_121052025
transcript_64764.known	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1802	junction_2	19.5	1991	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	10093997	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10115820_10125625_10125709_10126268
transcript_64768.nnic	chr3	+	1879	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-21	-86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGTTCCTATTTCAAG	10141735	False	NA	12	True	ATTAAA	-20	NA	10141756	10153581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150923_10153392
transcript_64769.nnic	chr3	+	1965	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141735	False	NA	10	True	ATTAAA	-20	NA	10141756	10153667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150923_10153392
transcript_6477.known	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913196	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_120913451_120952438
transcript_64770.nnic	chr3	+	1987	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-21	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTTCATTTCGAA	10141735	False	NA	17	True	ATTAAA	-19	NA	10141756	10153524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_64771.nnic	chr3	+	2043	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-21	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGAAGTTCCTATTTCAA	10141735	False	NA	11	True	ATTAAA	-19	NA	10141756	10153580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_64772.nnic	chr3	+	2074	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10136568	True	NA	10	True	ATTAAA	-20	NA	10141812	10153667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_64773.nnic	chr3	+	2134	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141735	False	NA	10	True	ATTAAA	-20	NA	10141756	10153667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150935_10153235
transcript_64777.known	chr3	+	4414	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	12	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10136533	True	NA	10	True	ATTAAA	-20	NA	10141777	10153667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10142188_10146513_10146637_10149786
transcript_6478.nnic	chr1	+	1099	2	NIC	ENSG00000226067.7	novel	821	3	NA	NA	38443	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	120951397	False	NA	NA	False	AATAAA	-31	NA	120951770	120953463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_120952626_120953219
transcript_64780.known	chr3	+	2696	2	FSM	ENSG00000134086.8	ENST00000345392.2	2696	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	10136543	True	NA	NA	False	NA	NA	NA	10141787	10152082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10142188_10149786
transcript_64781.nnic	chr3	-	522	3	Antisense	novelGene_ENSG00000134070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCTCATCTCCACCCTG	-10226468	True	NA	NA	False	AATAAA	-20	NA	10226493	10194767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_10195071_10222741_10222822_10226354
transcript_6479.known	chr1	+	7091	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	64.9888879390589	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAACAGAAATTGTATA	121181374	True	NA	NA	False	AATAAA	-21	NA	121184974	121392874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
transcript_64793.known	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	442.807987258865	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305351	True	NA	-4	True	AATAAA	-17	NA	10321082	10300930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
transcript_64795.known	chr3	-	1479	10	FSM	ENSG00000157020.18	ENST00000383801.6	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	447.910815637926	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAACTAAATAAAGTCATA	-10305353	True	NA	-34	True	NA	NA	NA	10321084	10300960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10321049
transcript_64806.known	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_8	121.040734362445	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305381	True	NA	-4	True	AATAAA	-17	NA	10321112	10300930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_64809.known	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	428.242629825663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	-10305330	True	NA	-23	True	ACTAAA	-2	NA	10321061	10300949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_64810.nic	chr3	-	1208	9	NIC	ENSG00000157020.18	novel	1603	9	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_1	310.476649685608	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	-10305476	True	NA	-23	True	ACTAAA	-2	NA	10321207	10300949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_64818.known	chr3	-	883	5	FSM	ENSG00000157020.18	ENST00000397105.7	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_4	151.01552072552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATTCTTTACCCAACTT	-10305362	True	NA	NA	False	TATAAA	-4	NA	10321093	10311572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_64819.known	chr3	-	1467	9	FSM	ENSG00000157020.18	ENST00000397109.7	1467	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	365.144984047433	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305310	True	NA	-4	True	AATAAA	-17	NA	10321041	10300930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320870
transcript_64822.nic	chr3	+	2647	20	NIC	ENSG00000197548.13	novel	5333	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	30.3926292274515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	11270125	True	NA	24	True	NA	NA	NA	11272391	11555083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_11272431_11282192_11282439_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_64824.known	chr3	+	4959	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	11.1964776207123	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	11270149	True	NA	NA	False	AATAAA	-17	NA	11272415	11557665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_64825.known	chr3	+	2296	18	FSM	ENSG00000197548.13	ENST00000354956.9	2296	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	25.3631070106135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	11270149	True	NA	24	True	NA	NA	NA	11272415	11555083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11426803_11426927_11554810
transcript_64827.nnic	chr3	+	2251	18	NIC	ENSG00000197548.13	novel	4959	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	24.2432882303835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	11270116	True	NA	24	True	NA	NA	NA	11272382	11555083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_6483.known	chr1	-	748	5	FSM	ENSG00000188610.12	ENST00000452190.2	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	137.729807957464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATATATATGATATAC	NA	False	NA	NA	False	GATAAA	-6	NA	121184292	121168734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337_121183470_121183980
transcript_64832.known	chr3	-	3725	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	44.2013574452188	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGTACGTGTGCAGT	-11720528	True	NA	-5	True	AATAAA	-14	NA	11720746	11556069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
transcript_64833.known	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	21.9928965804871	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-11642759	True	NA	-4	True	AATAAA	-15	NA	11643915	11556068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
transcript_64845.known	chr3	-	1213	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	0	7	0	multi-exon	FALSE	canonical	3	175	junction_5	17.4027912375326	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846772	11790441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_64847.known	chr3	-	1297	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	71.3335280371174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846919	11790441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_64851.known	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	5.30919014539883	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	-12156465	True	NA	-24	True	CATAAA	-31	NA	12158912	12153067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
transcript_64854.known	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_16	36.6461116627672	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656362	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_64856.known	chr3	-	2354	16	FSM	ENSG00000132155.14	ENST00000684903.1	3129	16	76	699	0	-405	multi-exon	FALSE	canonical	3	14	junction_14	96.6267503794311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGGAAGCCATTTGC	-12656370	True	NA	NA	False	NA	NA	NA	12664125	12584332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12618514_12618748_12663812
transcript_64862.known	chr3	+	1909	13	FSM	ENSG00000154743.19	ENST00000454502.6	1909	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	35.5011736895181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	12481995	True	NA	32	True	AATAAA	-24	NA	12484442	12533317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503470_12503646_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64866.known	chr3	+	2062	13	FSM	ENSG00000154743.19	ENST00000681482.1	2062	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	30.1343058471386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	12481973	True	NA	41	True	TTTAAA	-9	NA	12484420	12539658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_6487.known	chr1	-	2396	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	74.1994309651735	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAGGCTAATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121184340	121167645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
transcript_64871.known	chr3	+	2444	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	21.4691783688783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	12481973	True	NA	NA	False	AATAGA	-10	NA	12484420	12533653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64873.known	chr3	+	1912	12	FSM	ENSG00000154743.19	ENST00000446004.6	1912	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	34.3549772639994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCTGTAAATGGATTC	12481973	True	NA	3	True	AATAAA	-13	NA	12484420	12539620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12539160
transcript_64878.known	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32.9622874918325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	12482032	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_6488.known	chr1	-	1773	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	110.665662646048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	-121183855	False	NA	NA	False	AATAAA	-18	NA	121183911	121167719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
transcript_64881.known	chr3	+	2149	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	33.8509128018826	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	12482043	True	NA	32	True	AATAAA	-24	NA	12484490	12533317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64883.known	chr3	+	2373	11	FSM	ENSG00000154743.19	ENST00000679756.1	2373	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	35.6119362012233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCCTGTCTCAAAAAAAA	12481987	True	NA	NA	False	AATAGA	-4	NA	12484434	12533647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64885.known	chr3	+	2358	11	FSM	ENSG00000154743.19	ENST00000415684.6	2358	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	29.9573029493645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12481987	True	NA	NA	False	AATAGA	-16	NA	12484434	12533659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64886.known	chr3	+	2244	11	FSM	ENSG00000154743.19	ENST00000680943.1	2244	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	43.5776318769159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATAAAGCCTTTTTG	12482115	True	NA	-2	True	AATGAA	-20	NA	12484562	12533283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64887.known	chr3	+	2293	11	FSM	ENSG00000154743.19	ENST00000681676.1	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	39.344631145812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGTGAGAAAGTCA	12482057	True	NA	16	True	AATAAA	-8	NA	12484504	12533301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_64892.known	chr3	+	1679	8	FSM	ENSG00000075975.17	ENST00000448482.1	1679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.4039621719117	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTACCAAAGGAG	12554340	True	NA	-45	True	AGTAAA	-25	NA	12557089	12582626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12557177_12568874_12568998_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_64897.known	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	56.1231285260859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	12554337	True	NA	61	True	NA	NA	NA	12557086	12582503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_64901.known	chr3	+	1587	6	FSM	ENSG00000154743.19	ENST00000490981.2	1587	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	40.5038269796818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGGAGTTCGAGACCAG	12482115	True	NA	NA	False	NA	NA	NA	12484562	12505574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_64903.known	chr3	+	2913	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14.7372826531895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	12481987	True	NA	NA	False	NA	NA	NA	12484434	12505766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
transcript_64914.known	chr3	-	555	4	FSM	ENSG00000144713.13	ENST00000457131.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7894.08894187431	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGCAGCTCATGTG	-12641201	True	NA	-87	True	AAGAAA	-1	NA	12841544	12836101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
transcript_64915.known	chr3	-	620	4	FSM	ENSG00000144713.13	ENST00000435983.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	7897.85063587978	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGGCATCTTCCTTCC	-12641202	True	NA	-35	True	AATAAA	-12	NA	12841545	12836049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141_12840354_12841493
transcript_64917.known	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	2364.05870391485	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-12641222	True	NA	-26	True	NA	NA	NA	12841565	12834484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
transcript_64918.known	chr3	-	567	4	FSM	ENSG00000144713.13	ENST00000273223.10	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6787.9220842775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCATCTTCCTTCCTTG	-12641203	True	NA	-32	True	AATAAA	-15	NA	12841546	12836046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839585_12840141_12840243_12841493
transcript_64919.known	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	16028	junction_1	687.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	-12641186	True	NA	-45	True	AATAAA	-2	NA	12841529	12836059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141
transcript_64920.known	chr3	-	631	3	FSM	ENSG00000144713.13	ENST00000452606.2	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_2	2779.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTTTCCAAAATGTT	-12641200	True	NA	NA	False	NA	NA	NA	12841543	12839050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12839531_12840141_12840243_12841493
transcript_64921.known	chr3	+	2819	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	13.2506696779287	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479519	True	NA	11	True	AATAAA	-19	NA	13480305	13506416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_64924.known	chr3	+	1018	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	20.2813543269017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	13479516	True	NA	NA	False	NA	NA	NA	13480302	13504849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_64926.known	chr3	-	1603	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	174.568038311714	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-14120064	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
transcript_64928.known	chr3	-	1433	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	0.5	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-14120064	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14113195_14116425_14116525_14124654
transcript_64930.known	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_8	24.007776517898	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-14173598	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_64933.known	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	20.5880491692399	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	14122105	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
transcript_64939.known	chr3	+	3359	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2520	junction_1	773.395543474791	3085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTTGATGTTTCTCTG	14146216	True	NA	6	True	AATAAA	-33	NA	14178816	14201122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
transcript_64941.known	chr3	+	2940	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_7	28.3788653754867	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	14649700	True	NA	7	True	AATAAA	-17	NA	14651761	14672655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
transcript_64949.known	chr3	+	2720	13	NNC	ENSG00000154781.17	novel	2940	11	NA	NA	-16	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	95.6251361654804	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCCAGCTGCCTTTT	14649684	True	NA	5	True	AATAAA	-15	NA	14651745	14672653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661640_14661643_14661668_14661668_14661699_14661841_14661847_14665022_14665054_14665055_14665124_14666804_14666948_14669933_14670087_14670895
transcript_64950.known	chr3	+	1201	2	FSM	ENSG00000285969.1	ENST00000649475.1	1201	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGGGCCTCTGAAGG	NA	False	NA	NA	False	AAAACA	-26	NA	14791533	14793504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14791783_14792552
transcript_64951.nic	chr3	+	1594	14	ISM	ENSG00000154783.12	ENST00000476851.1	2198	17	1778	0	1778	0	3prime_fragment	TRUE	canonical	3	54	junction_3	9.4855854516707	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAAATTTAGTAAG	NA	False	NA	7	True	AATAAA	-19	NA	14898739	14933439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14926069_14926199_14932576_14932732_14933130
transcript_64954.known	chr3	-	1119	4	FSM	ENSG00000131368.8	ENST00000449354.6	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	340.917389797978	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGCCACATTGAAACA	-15049653	True	NA	NA	False	TATAAA	-32	NA	15065260	15049211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15049936_15053379_15053468_15059368_15059476_15065060
transcript_64957.known	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	40.0860186210715	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-15049708	True	NA	NA	False	AATAAA	-21	NA	15065315	15048511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
transcript_64963.known	chr3	-	1281	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-15049710	True	NA	NA	False	NA	NA	NA	15065317	15051716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15052634_15059368_15059476_15065060
transcript_64964.nic	chr3	-	743	2	ISM	ENSG00000131368.8	ENST00000447299.1	723	4	-49	6587	-32	-6587	5prime_fragment	FALSE	canonical	3	772	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCAGGGCTCAGTAT	-15049742	True	NA	NA	False	NA	NA	NA	15065349	15059021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_15059476_15065060
transcript_64965.nic	chr3	-	1064	4	ISM	ENSG00000131381.12	ENST00000441057.5	1352	9	-15	10936	0	0	5prime_fragment	FALSE	canonical	3	46	junction_2	23.1132477644796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-15096854	True	NA	NA	False	AGTAAA	-15	NA	15099148	15095670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_15096289_15096534_15096711_15098118_15098275_15099034
transcript_64968.known	chr3	-	903	3	FSM	ENSG00000131381.12	ENST00000449050.5	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-15096849	True	NA	NA	False	AGTAAA	-15	NA	15099143	15095670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15096289_15096534_15096711_15099034
transcript_6497.known	chr1	-	164	1	FSM	ENSG00000206737.1	ENST00000384010.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTAGTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	143729570	143729406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_143729400_143729600
transcript_64971.known	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	-15096842	True	NA	NA	False	NA	NA	NA	15099136	15095997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15096289_15096534_15096711_15099021
transcript_64972.known	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_15	27.8701901679913	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	15204209	True	NA	NA	False	AATAAA	-13	NA	15206245	15252916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_64976.known	chr3	-	4020	7	FSM	ENSG00000206562.12	ENST00000443029.5	4020	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	85.8286406484197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTCTTGACTTAT	-15424917	True	NA	1	True	AATAAA	-21	NA	15427518	15381274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15384188_15411244_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_6498.known	chr1	+	2675	2	FSM	ENSG00000232721.3	ENST00000443018.3	2743	2	68	0	68	0	multi-exon	FALSE	canonical	2	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATGGTACCTGGTTTT	143736032	False	NA	NA	False	AATAAA	-16	NA	143736065	143739506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_143736124_143736889
transcript_64982.known	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	3.49857113690718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	15425410	True	NA	10	True	AATAAA	-20	NA	15427597	15442613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
transcript_64986.known	chr3	-	2618	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	66.5023307862213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTCCATATCTGAT	-15424943	True	NA	NA	False	NA	NA	NA	15427544	15409759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_64988.nnic	chr3	-	981	6	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	-3	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	87.6378913484344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCAAGAGTTTTCCTTC	-15424946	True	NA	-25	True	AATAAA	-15	NA	15427547	15411343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_15411438_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_64989.nic	chr3	-	1164	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	53.2743840884153	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-15424946	True	NA	-37	True	AATAAA	-18	NA	15427547	15413668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_64991.known	chr3	+	1037	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	30.4168949763121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAACAATCTCATCTT	15425410	True	NA	NA	False	NA	NA	NA	15427597	15439340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
transcript_64993.known	chr3	-	1221	5	FSM	ENSG00000206562.12	ENST00000450816.6	1221	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	75.1215681412469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCTGAGGCAAGAGAA	-15424939	True	NA	NA	False	NA	NA	NA	15427540	15411017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15426286_15426636_15427401
transcript_64997.nic	chr3	-	1029	5	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	74.7374571416502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-15424946	True	NA	-37	True	AATAAA	-18	NA	15427547	15413668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15426286_15426636_15427401
transcript_64999.known	chr3	+	2264	5	FSM	ENSG00000169814.16	ENST00000303498.10	2264	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	35.2455670971542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACATCTTCCTCTAACA	15599618	True	NA	-69	True	NA	NA	NA	15601735	15645729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601895_15632590_15632867_15635423_15635689_15641907_15642058_15644315
transcript_65.known	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00170_+_0_1000
transcript_650.nic	chr1	+	1219	2	ISM	ENSG00000204859.13	ENST00000435905.5	1001	3	-26	566	-3	-566	5prime_fragment	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGACCTTAAGACAAT	6578512	True	NA	NA	False	NA	NA	NA	6579990	6581679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_6580071_6580540
transcript_65000.known	chr3	+	2083	4	FSM	ENSG00000169814.16	ENST00000449107.7	2083	4	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	9.67241208569794	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGGAGCCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	15601369	15645582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601771_15635423_15635689_15641907_15642058_15644315
transcript_65003.nic	chr3	+	662	3	ISM	ENSG00000169814.16	ENST00000449107.7	2083	4	337	3342	-19	0	5prime_fragment	FALSE	canonical	1	64	junction_2	10.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	15601695	False	NA	19	True	ATTAAA	-19	NA	15601706	15642240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_15601771_15635423_15635689_15641907
transcript_65004.known	chr3	+	2069	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	22.2910046630673	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	15599627	True	NA	21	True	AATAAA	-27	NA	15601744	15645819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
transcript_65005.known	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	27	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	15599627	True	NA	31	True	ATTAAA	-31	NA	15601744	15642252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601895_15635423_15635689_15641907
transcript_65014.known	chr3	-	2009	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_12	21.5547993495648	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAAAAGTTATTCT	-15596573	True	NA	NA	False	ATTAAA	-21	NA	15601569	15560698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_6502.known	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	85.5686858611256	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	143971986	143955286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
transcript_65021.known	chr3	-	1880	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_13	62.5223871016525	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTACAGTAAAGGAAT	-15596573	True	NA	70	True	AATAAA	-17	NA	15601569	15560746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_65032.known	chr3	-	1734	14	FSM	ENSG00000131373.15	ENST00000451445.6	1734	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	72.9926639744217	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	-15596591	True	NA	71	True	AATAAA	-18	NA	15601587	15560745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_65042.known	chr3	-	1178	3	FSM	ENSG00000154813.10	ENST00000285082.8	1178	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTGTGTTTTGATA	-16258165	False	NA	NA	False	NA	NA	NA	16264777	16259909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16260830_16264154_16264230_16264594
transcript_65043.known	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	2	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	-16258331	True	NA	1	True	AATAAA	-19	NA	16264943	16257060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16260830_16264154_16264230_16264768
transcript_65046.known	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-16258357	True	NA	0	True	AATAAA	-40	NA	16264969	16257978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16260830_16264768
transcript_65049.known	chr3	+	1994	10	FSM	ENSG00000154814.14	ENST00000442255.5	1994	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	62.7808258847033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATCTTAATAATTT	16263071	True	NA	NA	False	AATGAA	-11	NA	16265206	16303983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16272144_16272322_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65052.nnic	chr3	+	2353	10	NNC	ENSG00000154814.14	novel	1681	10	NA	NA	11	14264	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	46.630409195378	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGGTGTGCCAATCTTG	16263035	True	NA	4	True	ATTAAA	-21	NA	16265170	16320351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16319460
transcript_65053.known	chr3	+	1681	10	FSM	ENSG00000154814.14	ENST00000605932.5	1681	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	46.9194213387743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACTGGTGTATTACTAT	16263066	True	NA	NA	False	NA	NA	NA	16265201	16337361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
transcript_65054.known	chr3	+	3983	9	FSM	ENSG00000154814.14	ENST00000627468.2	3983	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	48.2336436007068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGGCTCTATGAGTT	NA	False	NA	2	True	ATTAAA	-15	NA	16265159	16306086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65058.known	chr3	+	3916	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	19.4867743610891	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	16263076	True	NA	3	True	ATTAAA	-16	NA	16265211	16306087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65064.nic	chr3	+	1408	8	NIC	ENSG00000154814.14	novel	3916	9	NA	NA	11	-381	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	54.0710039613447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGAGAGCTCCTGTCCT	16263035	True	NA	7	True	AATAAA	-14	NA	16265170	16303602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_16265506_16269125_16269276_16270944_16271072_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65070.nnic	chr3	-	1000	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27149	87	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATTAGTTCTGTCCCTT	-16670016	True	NA	-4	True	AATAAA	-36	NA	16670330	16647665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_16648613_16670277
transcript_65071.nnic	chr3	-	905	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27149	-8	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACATAACTTCTAAGACAA	-16670016	True	NA	-6	True	AATAAA	-26	NA	16670330	16647760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_16648613_16670277
transcript_65072.known	chr3	-	411	3	FSM	ENSG00000229271.2	ENST00000426218.1	411	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTGATGAGTTGTT	-16697140	False	NA	-9	True	AATAAA	-24	NA	16697479	16687985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16688212_16692288_16692373_16697378
transcript_65073.nnic	chr3	+	397	2	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAAGAAGCGGCCGAGGC	16883279	True	NA	NA	False	ATTAAA	-12	NA	16884231	16884913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_+_16884537_16884821
transcript_65077.known	chr3	+	465	2	FSM	ENSG00000286352.1	ENST00000665745.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTTGCTATAGTTTA	17742937	True	NA	NA	False	AATAAA	-22	NA	17742951	17745665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_17743119_17745367
transcript_65078.nnic	chr3	+	967	3	NNC	ENSG00000274840.4	novel	307	3	NA	NA	-152328	-24582	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAATTCAGGAGACTATCA	17860289	True	NA	NA	False	AATAAA	-12	NA	17860897	18016959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_17861403_18013654_18013775_18016617
transcript_65082.nic	chr3	+	1680	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50097	-884	-9711	527	3prime_fragment	FALSE	canonical	1	3	junction_1	10.9645894689324	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCACGTATTTCTT	18515880	True	NA	NA	False	ATTAAA	-21	NA	18516079	18531254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
transcript_65087.known	chr3	-	2860	13	FSM	ENSG00000163576.18	ENST00000295824.14	2860	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.05986784905138	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTTTTCCATAAAGC	-19934124	True	NA	NA	False	AATAAA	-21	NA	19934217	19879471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_19879805_19882549_19882732_19884402_19884616_19888443_19888652_19896686_19896842_19898777_19898846_19899431_19899516_19905619_19905750_19915302_19915414_19918231_19918413_19919832_19919977_19920504_19920568_19933229
transcript_65089.nnic	chr3	+	2430	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	349.665395612561	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	15	True	AATAAA	-17	NA	19947031	19985175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_19947264_19947416_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_6509.known	chr1	-	1658	3	FSM	ENSG00000263513.6	ENST00000369175.4	1658	3	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_1	133.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	NA	False	NA	NA	False	NA	NA	NA	143971965	143955877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_143956482_143968923_143969002_143970989
transcript_65091.known	chr3	+	1358	7	FSM	ENSG00000144566.11	ENST00000446547.5	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	439.557226712922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGTACAGTAGTCA	19946589	False	NA	NA	False	AATATA	-45	NA	19947398	19984147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_19947522_19950805_19951062_19970547_19970718_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_65096.known	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_4	58.6153563496802	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	19931592	True	NA	15	True	AATAAA	-17	NA	19947096	19985175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_65097.known	chr3	+	1443	6	FSM	ENSG00000144566.11	ENST00000422242.1	1443	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	374.684614042264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCTTGTTTTAGGAAT	19946595	False	NA	-50	True	TTTAAA	-22	NA	19947404	19984450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_19947522_19950805_19951062_19975642_19975753_19976046_19976170_19978309_19978404_19983707
transcript_6510.known	chr1	-	314	2	FSM	ENSG00000237343.1	ENST00000455105.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGGCGCTACTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	144419192	144418112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_144418371_144419136
transcript_65100.known	chr3	-	1969	9	FSM	ENSG00000129810.15	ENST00000421451.5	1969	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	76.2822677625672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	-20179665	True	NA	NA	False	AATAGA	-23	NA	20186127	20161008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65102.known	chr3	-	1531	8	FSM	ENSG00000129810.15	ENST00000306698.6	1531	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	92.9818942217313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	-20179729	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65103.known	chr3	-	3070	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	45.4182378184206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTCCTTCTATT	-20179744	True	NA	-3	True	AATAAA	-15	NA	20186206	20169483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65105.known	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	72.4557570845401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	-20179729	True	NA	-15	True	AATAAA	-33	NA	20186191	20170484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65107.known	chr3	-	1075	8	FSM	ENSG00000129810.15	ENST00000417364.1	1075	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	70.7161615912804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTAAGAGTACACAAAC	-20179665	True	NA	NA	False	TTTAAA	-37	NA	20186127	20170643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65111.nic	chr3	-	2007	8	ISM	ENSG00000129810.15	ENST00000263753.8	2338	9	-64	9892	-49	0	5prime_fragment	FALSE	canonical	3	122	junction_7	48.9752123892427	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	-20179793	True	NA	-15	True	AATAAA	-33	NA	20186255	20170484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_6512.known	chr1	-	165	1	FSM	ENSG00000278099.1	ENST00000617626.1	165	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTCTGGTTTC	NA	False	NA	NA	False	GGGGCT	-20	NA	144551943	144551778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_144551800_144551900
transcript_65120.known	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	71.5471872263334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-20179744	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65129.nic	chr3	-	1338	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-178	3914	-99	164	5prime_fragment	FALSE	canonical	3	139	junction_1	48.054136138318	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAATCTGTCAGTTCC	-20179843	True	NA	NA	False	AATAAA	-35	NA	20186305	20174557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_6513.known	chr1	-	164	1	FSM	ENSG00000277918.1	ENST00000610976.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTAGTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144560829	144560665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_144560700_144560800
transcript_65131.nic	chr3	-	1177	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-64	4073	-49	164	5prime_fragment	FALSE	canonical	3	122	junction_5	52.6444678954969	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAATCTGTCAGTTCC	-20179793	True	NA	NA	False	AATAAA	-35	NA	20186255	20174557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65133.nic	chr3	-	1229	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-178	4023	-99	55	5prime_fragment	FALSE	canonical	3	139	junction_1	48.054136138318	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAGAAGAGAA	-20179843	True	NA	8	True	ACTAAA	-22	NA	20186305	20174666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65134.nic	chr3	-	1068	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-64	4182	-49	55	5prime_fragment	FALSE	canonical	3	122	junction_5	52.6444678954969	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAGAAGAGAA	-20179793	True	NA	8	True	ACTAAA	-22	NA	20186255	20174666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65140.nic	chr3	-	1166	5	ISM	ENSG00000151789.12	ENST00000281523.8	10478	8	-50	24603	-50	-1	5prime_fragment	FALSE	canonical	3	13	junction_2	9.24662100445346	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGCAAAGTGTCATTTATA	NA	False	NA	-1	True	AATAAA	-6	NA	21751260	21436820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_65141.nic	chr3	-	1055	5	NIC	ENSG00000151789.12	novel	651	5	NA	NA	-50	207	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	9.80752262296652	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATCTGGACATTCCCC	NA	False	NA	-5	True	AATAAA	-23	NA	21751260	21561711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_21562096_21563261_21563313_21564573_21564685_21664885_21665029_21750894
transcript_65142.nic	chr3	-	697	5	NIC	ENSG00000151789.12	novel	651	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	9.80752262296652	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGGCATATCTCAGCT	-21750467	True	NA	NA	False	AATAAA	-35	NA	21751109	21561918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_21562096_21563261_21563313_21564573_21564685_21664885_21665029_21750894
transcript_65145.known	chr3	+	2715	6	FSM	ENSG00000182247.10	ENST00000396703.6	2715	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	292.735375381931	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGGAAAGTTGCTCAGA	23203307	True	NA	9	True	AATAAA	-22	NA	23203326	23591794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23203465_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
transcript_65148.known	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	38.7432574779148	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	23793854	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_65153.known	chr3	+	1398	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.8306254942604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	23793864	True	NA	24	True	AATAAA	-27	NA	23805964	23891316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
transcript_65154.known	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	50.8152290165065	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	23807508	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_65159.known	chr3	-	2335	5	FSM	ENSG00000197885.11	ENST00000388759.7	2335	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	34.1979531551232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACATGTACTGCCAAAAT	-23915442	True	NA	NA	False	NA	NA	NA	23916969	23891659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23911328_23911447_23916783
transcript_65168.known	chr3	+	2155	4	FSM	ENSG00000174748.22	ENST00000307839.10	2155	4	0	0	0	0	multi-exon	FALSE	canonical	3	12303	junction_1	5606.50302971667	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	23669530	True	NA	NA	False	CATAAA	-18	NA	23917131	23920989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917849_23918032_23918439_23918577_23919195
transcript_6517.known	chr1	+	2423	4	FSM	ENSG00000215784.6	ENST00000400889.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	70.153799295231	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	145095973	145112696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145097000_145098987_145099066_145103006_145103132_145111502
transcript_65173.known	chr3	+	824	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	10769.1344230733	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
transcript_65176.known	chr3	+	566	4	FSM	ENSG00000174748.22	ENST00000645079.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	11369.4228036822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCGTGGCCTTGGAAA	23669536	True	NA	NA	False	NA	NA	NA	23917137	23919393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917836_23918032_23918439_23918577_23919195
transcript_65179.known	chr3	+	564	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	2	323	junction_1	11248.7972986745	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	23669546	True	NA	13	True	AATAAA	-2	NA	23917147	23919537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
transcript_65183.known	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11376.0195440526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	23669697	False	NA	NA	False	NA	NA	NA	23917298	23919301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
transcript_65189.known	chr3	+	605	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	11290.7333784047	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
transcript_65194.known	chr3	-	795	4	FSM	ENSG00000197885.11	ENST00000416026.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.9103822808329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGATTGCCTTTAAGTG	-23915425	True	NA	NA	False	ACTAAA	-30	NA	23916952	23893064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23916783
transcript_65200.known	chr3	-	778	2	FSM	ENSG00000223791.1	ENST00000426702.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACAGTAGGTGAATTTT	-23806873	True	NA	NA	False	AATAAA	-23	NA	23806905	23804023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23804715_23806818
transcript_65201.known	chr3	-	1605	5	FSM	ENSG00000197885.11	ENST00000412028.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.4168303860626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAGTATCAAAAAT	-23915436	True	NA	-30	True	NA	NA	NA	23916963	23892306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916860
transcript_65202.known	chr3	-	1644	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.0438928839829	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAATAAAAGTATCAAA	-23915397	True	NA	-33	True	NA	NA	NA	23916924	23892309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
transcript_65203.known	chr3	+	1785	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	0	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23669546	True	NA	27	True	AATAAA	-16	NA	23917147	23919551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23918577_23919195
transcript_65204.known	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_2	414.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23917449	False	NA	27	True	AATAAA	-16	NA	23917704	23919551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23918032_23918439_23918577_23919195
transcript_65205.known	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	18.3370644838343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-25779333	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_65206.known	chr3	-	2086	12	FSM	ENSG00000151092.18	ENST00000308710.9	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	107.429854108246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTTCCATATGTGAC	-25779271	True	NA	-23	True	AATAAA	-14	NA	25783381	25719275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_65209.known	chr3	-	2024	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	79.6557593649072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATATGTGACTATAA	-25779328	True	NA	-18	True	AATAAA	-19	NA	25783438	25719270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_6521.nnic	chr1	+	2274	4	NNC	ENSG00000215784.6	novel	2423	4	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	117.139043685509	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	145096002	145112696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_145096880_145098987_145099066_145103006_145103132_145111502
transcript_65218.known	chr3	+	1506	3	FSM	ENSG00000151093.8	ENST00000280701.8	1506	3	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	3.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	25789867	True	NA	NA	False	ATTAAA	-17	NA	25790089	25794531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_25790148_25790989_25791998_25794091
transcript_65220.known	chr3	+	1696	2	FSM	ENSG00000179796.12	ENST00000396641.6	1696	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	26622593	True	NA	13	True	AATAAA	-25	NA	26622805	26710776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_26623238_26709512
transcript_65221.known	chr3	+	927	2	FSM	ENSG00000179796.12	ENST00000432040.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGACAGCCCACAACGT	26624059	True	NA	NA	False	NA	NA	NA	26624080	26710161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_26624359_26709512
transcript_65223.known	chr3	+	332	3	FSM	ENSG00000225548.7	ENST00000455984.1	332	3	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_2	1.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCTGGATTCAAGTCA	27821430	False	NA	NA	False	NA	NA	NA	27821597	27860192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_27821725_27824649_27824749_27860086
transcript_6523.nnic	chr1	+	2192	3	NIC	ENSG00000215784.6	novel	2423	4	NA	NA	29	-77	combination_of_known_splicesites	FALSE	canonical	2	46	junction_2	175.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	145096002	145112619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_145097000_145098987_145099066_145111502
transcript_65234.known	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	37.9881829101673	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	-28348078	True	NA	-17	True	AATAAA	-39	NA	28348824	28321046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65244.known	chr3	-	1485	7	FSM	ENSG00000163512.14	ENST00000463512.5	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	32.9110754745099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCAAAAGCAAATTTTC	-28348928	False	NA	NA	False	NA	NA	NA	28348972	28326489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65246.known	chr3	-	943	7	FSM	ENSG00000163512.14	ENST00000334100.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	40.1524871237414	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTTATCATTTGG	-28348585	False	21	-14	True	AATAAA	-16	NA	28348629	28331688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28331951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65247.known	chr3	-	1366	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	50.4405590769968	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTGTTTTATCATTT	NA	False	NA	-16	True	AATAAA	-14	NA	28349050	28331690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65254.known	chr3	+	670	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	395.370079798662	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237583	True	NA	19	True	AATAAA	-15	NA	28241623	28319773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
transcript_65257.known	chr3	+	6009	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	143.206920999728	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCCAAAAAAAAAAAGTTT	28237578	True	NA	NA	False	AGTAAA	-15	NA	28241618	28325142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
transcript_65261.known	chr3	+	724	4	FSM	ENSG00000187118.14	ENST00000334841.10	724	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	387.893742609436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237583	True	NA	19	True	AATAAA	-15	NA	28241623	28319773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241902_28263290_28263381_28316332_28316424_28319508
transcript_65263.known	chr3	+	549	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	301	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGGTTTCTTAAATG	28237577	True	NA	17	True	AATAAA	-13	NA	28241617	28319771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28316332_28316424_28319508
transcript_65266.known	chr3	+	3749	3	FSM	ENSG00000187118.14	ENST00000477739.1	3749	3	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCAAAGTTTTGGTT	28237543	True	NA	8	True	AATAAA	-4	NA	28241583	28319762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28263290_28263381_28316332
transcript_65267.nnic	chr3	-	1052	3	Antisense	novelGene_ENSG00000144642.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTGCTATTAACTAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	28575565	28556952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_28557739_28573959_28574013_28575352
transcript_6527.nnic	chr1	-	1093	4	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	-145215766	False	NA	NA	False	AATAAA	-19	NA	145215892	145164098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145164639_145170941_145171186_145214676_145214732_145215638
transcript_65272.nic	chr3	-	3496	12	NIC	ENSG00000144645.15	novel	3625	12	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	56.2669258281342	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	-31959477	True	NA	NA	False	AATATA	-16	NA	31960377	31660824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31960142
transcript_65274.known	chr3	+	3947	8	FSM	ENSG00000152642.11	ENST00000282541.10	3947	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	6.59003576838331	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCACCGTGGATCCTGTT	32105949	True	NA	7	True	AATAAA	-17	NA	32106619	32168709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32106759_32128075_32128254_32138586_32138728_32140227_32140367_32146621_32146735_32158875_32159110_32159567_32159675_32165813
transcript_65275.known	chr3	-	1891	1	FSM	ENSG00000261572.1	ENST00000565519.1	1891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGGCTTAAAATCACCA	-32238492	True	NA	NA	False	AATAAA	-14	NA	32238578	32236687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32236700_32238600
transcript_65276.known	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	75.4995860915807	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	32388801	True	NA	NA	False	NA	NA	NA	32391852	32455528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
transcript_65277.known	chr3	+	1214	4	FSM	ENSG00000153551.14	ENST00000349718.8	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	118.016947935455	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCAGTTGCACAAGGA	32391605	False	NA	7	True	AATAAA	-8	NA	32391697	32454830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32392066_32441839_32442014_32452391_32452474_32454240
transcript_65278.known	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	31.6684210040363	730	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32496258	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
transcript_65281.known	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_9	47.9409358829522	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	-32562944	True	NA	-1	True	AATAAA	-29	NA	32570858	32525973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_65287.known	chr3	-	1827	11	FSM	ENSG00000144635.9	ENST00000432458.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	123.549828004737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATCAGATAGCGTTT	-32562944	True	NA	87	True	AATAAA	-29	NA	32570858	32526283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32570345_32570420_32570624
transcript_6529.known	chr1	-	1015	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	-145215932	True	NA	NA	False	AATAAA	-19	NA	145216058	145164098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145164639_145214676_145214732_145215638
transcript_65295.known	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	227	junction_12	23.3360448159992	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	32685119	False	NA	16	True	ATTAAA	-18	NA	32685144	32773875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_65299.known	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	63.9517010657586	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	32685119	False	NA	13	True	AATAAA	-20	NA	32685144	32773714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_6530.nnic	chr1	-	992	2	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145216090	145164098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145164639_145215638
transcript_65308.nic	chr3	+	1556	10	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	54	45765	11	75	5prime_fragment	FALSE	canonical	3	235	junction_8	20.4884791475057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTGGAAACATACATAAGA	32678745	True	NA	NA	False	NA	NA	NA	32685198	32727949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667
transcript_65311.nic	chr3	+	2044	4	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	44	63552	1	1387	5prime_fragment	FALSE	canonical	3	254	junction_1	11.9536140513607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATTTCCTGA	32678735	True	NA	NA	False	NA	NA	NA	32685188	32710162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669
transcript_65313.nic	chr3	-	2555	17	NIC	ENSG00000170266.16	novel	2523	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	138.482836820127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-33093433	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33077093_33077238_33097010
transcript_65314.known	chr3	-	2512	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_15	91.1371615874788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTTTGATCTGTGG	-33096822	False	NA	0	True	AATAAA	-38	NA	33096835	32996608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
transcript_65315.known	chr3	-	2523	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_6	25.2899628750661	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATAGTCTTGGTTTG	-33093433	True	NA	-8	True	AATAAA	-30	NA	33097146	32996616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_6532.known	chr1	-	381	2	FSM	ENSG00000236140.1	ENST00000427732.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGCTACTATTTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	145287755	145286609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145286871_145287635
transcript_65320.known	chr3	+	3827	15	FSM	ENSG00000153558.16	ENST00000484457.6	3827	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	3.35105831592569	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTGCTTCCTTTTAA	33277178	True	NA	NA	False	AAAAAG	-5	NA	33277441	33388092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373259_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_65322.known	chr3	-	4175	16	FSM	ENSG00000153560.12	ENST00000283629.8	4175	16	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_8	54.3472783740517	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33439134	True	NA	-1	True	AATAAA	-23	NA	33440405	33388335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
transcript_65323.known	chr3	+	5962	18	FSM	ENSG00000170248.15	ENST00000457054.6	5962	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	127.504610134443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGTATGAATTCTTAT	33788987	True	NA	20	True	AATAAA	-21	NA	33798570	33869707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828837_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_65324.known	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_10	52.0893562838156	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	33789046	True	NA	16	True	AATAAA	-17	NA	33798629	33869703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_65328.known	chr3	-	513	2	FSM	ENSG00000178567.8	ENST00000624586.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTAAAGTAAACACTTTG	-36990852	False	NA	NA	False	TTTAAA	-7	NA	36992268	36990310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_36990436_36991880
transcript_65329.nic	chr3	-	1738	2	ISM	ENSG00000178567.8	ENST00000623924.1	543	3	-230	2181	-39	1320	5prime_fragment	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAGAAAAAAGTGT	-36991754	True	NA	NA	False	NA	NA	NA	36993170	36988990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_36990436_36992877
transcript_6533.known	chr1	-	164	1	FSM	ENSG00000270722.1	ENST00000605806.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	-145464491	True	NA	NA	False	NA	NA	NA	145465780	145465616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145465600_145465800
transcript_65330.known	chr3	+	2494	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	50.3496723541756	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	36990255	True	NA	20	True	AATAAA	-20	NA	36993517	37050846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65333.known	chr3	+	2428	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	105.564093221975	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	36993279	True	NA	18	True	AATAAA	-18	NA	36993803	37050844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65335.nic	chr3	+	2453	18	NIC	ENSG00000076242.16	novel	2494	19	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_16	76.2041512278686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	36993421	False	NA	20	True	AATAAA	-20	NA	36993465	37050846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048903_37049018_37050485
transcript_65336.known	chr3	+	2205	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	87.6017253468048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	36990332	False	NA	-27	True	NA	NA	NA	36993594	37050799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
transcript_65346.known	chr3	+	1978	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	26.2470315781931	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCATGGCTGTA	36990260	True	NA	12	True	AATAAA	-14	NA	36993522	37047740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
transcript_65351.known	chr3	+	1712	15	FSM	ENSG00000076242.16	ENST00000673899.1	1712	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	97.0129646290765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTATACTTGCCTTCTG	36990226	True	NA	-59	True	NA	NA	NA	36993488	37050767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65360.known	chr3	+	7772	24	FSM	ENSG00000144674.17	ENST00000361924.7	7806	24	-94	128	-14	1	multi-exon	TRUE	canonical	3	27	junction_2	67.1943545652775	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTGTACTTGTTC	37243146	False	NA	10	True	AATAAA	-20	NA	37243176	37366751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_37243623_37251394_37251485_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
transcript_65366.nic	chr3	+	1074	3	ISM	ENSG00000144674.17	ENST00000450863.6	1617	11	-51	41391	-28	-7870	5prime_fragment	FALSE	canonical	3	101	junction_2	23.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAATAATAATAATTATG	37238494	True	NA	NA	False	NA	NA	NA	37243218	37274115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_37243623_37251394_37251485_37273535
transcript_65371.known	chr3	+	2655	5	FSM	ENSG00000172936.16	ENST00000652213.1	2655	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	55.0743815217202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTCTACCTTGGAA	38137035	True	NA	-15	True	AATATA	-27	NA	38138632	38143001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38139863_38139999_38140387_38140550_38140756_38140849_38141131
transcript_65372.known	chr3	+	2667	5	FSM	ENSG00000172936.16	ENST00000650905.2	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	13.3111795119741	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	38137063	True	NA	6	True	AATAAA	-20	NA	38138660	38143022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
transcript_65373.known	chr3	+	2352	3	FSM	ENSG00000172936.16	ENST00000650112.2	2352	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	38137059	True	NA	3	True	AATAAA	-17	NA	38138656	38143019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38140756_38140849_38141131
transcript_65375.nic	chr3	+	568	4	ISM	ENSG00000093217.11	ENST00000649234.1	2106	20	-80	50129	-25	6002	5prime_fragment	FALSE	canonical	3	19	junction_3	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAACTATTTTACTTTGG	38346186	True	NA	NA	False	AATAAA	-6	NA	38346734	38363160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936
transcript_65376.nnic	chr3	+	1770	11	NNC	ENSG00000114739.14	novel	5370	10	NA	NA	125	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.8944940222114	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAAAAAAGTTGT	38454408	False	NA	-55	True	NA	NA	NA	38454443	38483374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_38454685_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_6538.known	chr1	+	1955	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	57.8413459540418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	145604729	True	NA	NA	False	ATTAAA	-16	NA	145607989	145670463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_65383.known	chr3	+	3076	6	FSM	ENSG00000157036.13	ENST00000287675.10	3076	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.7443008148506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATTGTTCTGCTCTTT	38495403	True	NA	6	True	GATAAA	-17	NA	38496339	38526303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_65385.known	chr3	+	1317	5	FSM	ENSG00000157036.13	ENST00000422077.6	1317	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.1285619132181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTGTCAGTATTATA	38495408	True	NA	NA	False	ACTAAA	-29	NA	38496344	38524699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38496531_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_65387.known	chr3	+	3965	19	FSM	ENSG00000114742.14	ENST00000302313.10	3965	19	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_12	23.6489892248702	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	39049063	True	NA	12	True	AATAAA	-17	NA	39052015	39096664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
transcript_65389.known	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	18.3196445107431	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-39105210	True	NA	0	True	AATACA	-25	NA	39107627	39096598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_65391.known	chr3	-	2593	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	12.1937483982572	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCTTCTGCCCCACCC	-39154094	False	NA	NA	False	NA	NA	NA	39154562	39142337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
transcript_65399.known	chr3	+	2101	7	FSM	ENSG00000144659.13	ENST00000650617.1	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_6	22.2816566310098	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTTCAAAAAAGCAGC	39379781	True	NA	65	True	NA	NA	NA	39383369	39397351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39383794_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_6540.known	chr1	+	2124	14	FSM	ENSG00000117262.19	ENST00000313835.14	2124	14	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	18.1346051880223	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGGTATGTCATTTT	145604727	True	NA	20	True	AATAGA	-16	NA	145607987	145670650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_65405.nic	chr3	+	1782	6	NIC	ENSG00000144659.13	novel	2101	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	84.6862444556375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAGCTGTTTGGAAA	39379772	True	NA	42	True	ATTAAA	-29	NA	39383360	39397203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_39383794_39389494_39389617_39390422_39390508_39391852_39392022_39394409_39394577_39396397
transcript_6541.nnic	chr1	+	1881	14	NNC	ENSG00000117262.19	novel	1955	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	62.677251613504	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	145604714	True	NA	NA	False	ATTAAA	-16	NA	145607974	145670463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623681_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_65410.known	chr3	-	764	4	FSM	ENSG00000287780.1	ENST00000655387.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTCTGTGCCTCTGTTT	-39384125	True	NA	NA	False	AATAAA	-30	NA	39384300	39292555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_39292951_39380903_39381121_39382952_39383045_39384240
transcript_65415.nic	chr3	+	1163	7	NIC	ENSG00000168028.14	novel	1227	5	NA	NA	148	0	combination_of_known_junctions	FALSE	canonical	3	266	junction_1	2032.5558349581	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	39368231	False	NA	5	True	AATAAA	-16	NA	39406910	39412438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_39407083_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65418.known	chr3	+	1032	7	FSM	ENSG00000168028.14	ENST00000443003.2	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_3	2152.16424017004	7265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	39368055	True	NA	1	True	AATAAA	-12	NA	39406734	39412434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39406765_39407620_39407787_39408605_39408740_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65419.known	chr3	+	1140	7	FSM	ENSG00000168028.14	ENST00000301821.11	1140	7	0	0	0	0	multi-exon	FALSE	canonical	3	3309	junction_1	976.540051519764	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACTGTAGATAGTGTAT	39368040	True	NA	27	True	AATAAA	-32	NA	39406719	39412542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39406765_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65420.known	chr3	+	874	6	FSM	ENSG00000168028.14	ENST00000458478.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2139.84939656977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATGTATCAGGATAGAG	39368053	True	NA	NA	False	NA	NA	NA	39406732	39412059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39406765_39407602_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895
transcript_65421.known	chr3	+	1227	5	FSM	ENSG00000168028.14	ENST00000478027.2	1227	5	0	0	0	0	multi-exon	FALSE	canonical	3	5192	junction_1	497.798340194099	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	39408189	False	NA	5	True	AATAAA	-16	NA	39408203	39412438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65422.known	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	-40309324	True	NA	NA	False	TATAAA	-17	NA	40309542	40173144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40174723_40301236_40301397_40309322
transcript_65424.nnic	chr3	-	582	3	FSM	ENSG00000280739.4	ENST00000688606.1	588	3	0	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGACTCTGTATTTTTTT	-40309324	True	NA	NA	False	AATAAA	-13	NA	40309542	40184383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40184586_40301236_40301397_40309322
transcript_65426.known	chr3	-	553	3	FSM	ENSG00000280739.4	ENST00000629217.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGAACGTGTTCCT	-40309294	True	NA	NA	False	AAAAAG	-45	NA	40309512	40232856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40233060_40301236_40301397_40309322
transcript_65427.known	chr3	-	2031	3	FSM	ENSG00000280739.4	ENST00000661550.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTTTGACTCAATAAA	-40309322	True	NA	NA	False	NA	NA	NA	40309540	40246818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40248472_40301236_40301397_40309322
transcript_65428.known	chr3	+	987	4	FSM	ENSG00000114784.4	ENST00000232905.4	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	28.3117564901148	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	40300074	True	NA	73	True	AGTAAA	-23	NA	40309706	40312424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40309973_40310892_40311057_40311469_40311572_40311969
transcript_65434.known	chr3	+	637	3	FSM	ENSG00000114784.4	ENST00000488260.1	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAAAGTATTCAAATAC	40300193	True	NA	NA	False	NA	NA	NA	40309825	40311795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40309973_40310892_40311057_40311469
transcript_65437.known	chr3	-	2201	3	FSM	ENSG00000223797.7	ENST00000420850.2	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATAAAACAGAATAATAA	-40453253	False	NA	NA	False	CATAAA	-9	NA	40453329	40444932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40446848_40451704_40451783_40453121
transcript_65438.known	chr3	+	812	6	FSM	ENSG00000188846.14	ENST00000416518.1	812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2574.097822539	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAAGCCTTTGGATT	40349315	True	NA	7	True	AATAAA	-25	NA	40457353	40462280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461940
transcript_65440.known	chr3	+	794	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	4918	junction_3	250.022498987591	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	40457849	False	NA	12	True	AATAAA	-14	NA	40457876	40462368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_65443.known	chr3	+	4841	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.76662979332984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTGTGATATTCTGT	40476147	True	NA	NA	False	AATAAA	-21	NA	40477121	40491053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
transcript_65444.known	chr3	+	3291	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	8.5146931829632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	40503718	True	NA	NA	False	NA	NA	NA	40506038	40518736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
transcript_65450.nic	chr3	+	2050	3	NIC	ENSG00000177842.12	novel	2022	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	40503678	True	NA	5	True	AATAAA	-21	NA	40505998	40517709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_40506126_40506303_40506377_40515859
transcript_65452.known	chr3	+	2022	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	40503719	True	NA	5	True	AATAAA	-21	NA	40506039	40517709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40506139_40506303_40506377_40515859
transcript_65453.known	chr3	+	8389	5	FSM	ENSG00000172888.12	ENST00000339296.10	8389	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.75806032459145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAGAGACAAAG	40524007	True	NA	NA	False	CATAAA	-16	NA	40524959	40539782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40525275_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_65454.known	chr3	+	2613	4	FSM	ENSG00000172888.12	ENST00000431278.5	2613	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.05536398239638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAATCTGTTGTGCA	40523945	True	NA	NA	False	AGTAAA	-21	NA	40524897	40534071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40525275_40525778_40525865_40530208_40530317_40532029
transcript_65456.known	chr3	+	255	1	FSM	ENSG00000234287.1	ENST00000457554.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	NA	False	NA	NA	False	NA	NA	NA	40761544	40761799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40761500_40761800
transcript_65458.nic	chr3	-	1929	18	NIC	ENSG00000168038.11	novel	1904	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	7.66152477890115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGACTCCGTGTGGCAGT	-41960105	True	NA	0	True	AATAAA	-20	NA	41962109	41882149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_41882281_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_65459.nnic	chr3	-	1810	17	NIC	ENSG00000168038.11	novel	4294	37	NA	NA	-11	-35730	combination_of_known_splicesites	TRUE	canonical	3	14	junction_1	6.15140989936453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTGTCTGATTAACTC	-41960084	True	NA	NA	False	NA	NA	NA	41962088	41835862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_41835972_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_65466.known	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.5758369027902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	-41960126	True	NA	NA	False	NA	NA	NA	41962130	41937094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
transcript_65467.known	chr3	+	3052	17	FSM	ENSG00000168036.18	ENST00000453024.6	3052	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	463.107333502451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATGGTACTGACTTT	41172930	True	NA	NA	False	NA	NA	NA	41199444	41239947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_65468.known	chr3	+	2770	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	446.693892496584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41173010	True	NA	NA	False	NA	NA	NA	41199524	41239904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_65470.known	chr3	+	3472	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_15	216.184016265979	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	41199376	False	NA	26	True	ATTAAA	-15	NA	41199388	41240443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_65471.known	chr3	+	2778	16	FSM	ENSG00000168036.18	ENST00000645982.1	2778	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	342.131709531091	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	41172927	True	NA	NA	False	NA	NA	NA	41199441	41239955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239812
transcript_65472.known	chr3	+	2784	16	FSM	ENSG00000168036.18	ENST00000647390.1	2784	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	377.938701672933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGCCTTGCTTGTTAA	41172971	True	NA	NA	False	NA	NA	NA	41199485	41239900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199623_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_65473.known	chr3	+	2890	16	FSM	ENSG00000168036.18	ENST00000642315.1	2890	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	369.393821761485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41199433	True	NA	NA	False	NA	NA	NA	41200142	41239904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_65474.known	chr3	+	2764	16	FSM	ENSG00000168036.18	ENST00000450969.6	2764	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	343.708183719206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCTTGTTAAATTTTT	41199402	True	NA	NA	False	NA	NA	NA	41200111	41239906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_65476.known	chr3	+	3086	15	FSM	ENSG00000168036.18	ENST00000644873.1	3086	15	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_10	350.073141045743	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41173023	True	NA	NA	False	NA	NA	NA	41199537	41239904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235726_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_65478.known	chr3	+	3283	15	FSM	ENSG00000168036.18	ENST00000643297.1	3283	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	335.536769176476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCTTGCTTTGAAG	41199401	True	NA	NA	False	NA	NA	NA	41200110	41239960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_65487.known	chr3	+	4620	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_1	34.1906419945575	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	42157851	True	NA	NA	False	ATTAAA	-20	NA	42160168	42212623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
transcript_65489.known	chr3	-	830	3	FSM	ENSG00000187094.12	ENST00000334681.9	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCGTTCCCTGCGTCTA	-42264763	True	NA	0	True	ATTAAA	-16	NA	42264903	42257824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42258232_42263416_42263633_42264696
transcript_6549.nic	chr1	+	1777	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	145821817	True	NA	11	True	AATAAA	-21	NA	145824177	145842493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_6550.nic	chr1	+	2022	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-4	263	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTATGCCTGTTCTTT	145821835	True	NA	14	True	NA	NA	NA	145824195	145842756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_6552.known	chr1	+	3777	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	12.7359366217272	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	145821839	True	NA	NA	False	AATAAA	-18	NA	145824199	145844402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_65520.known	chr3	-	1608	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	35.8406969178273	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	-42582012	False	NA	-24	True	AATAAA	-16	NA	42582028	42547970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_65522.known	chr3	-	6340	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	50.7195447753844	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-42579868	True	NA	-22	True	AATAAA	-18	NA	42581967	42547968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_65527.known	chr3	+	1047	4	FSM	ENSG00000008324.12	ENST00000447630.5	1047	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	561.377472532223	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGATTTCTAATTA	NA	False	NA	NA	False	TATAAA	-29	NA	42581839	42595114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_42581959_42590808_42590967_42591524_42591602_42594421
transcript_65528.nnic	chr3	+	961	4	Fusion	ENSG00000008324.12_ENSG00000289558.1	novel	2697	3	NA	NA	-55	-120	multi-exon	FALSE	canonical	3	41	junction_1	542.224020944193	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATGTGGAGGTATAGA	42580707	True	NA	17	True	AATAAA	-19	NA	42582082	42594994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_+_42582236_42590808_42590967_42591524_42591602_42594421
transcript_65535.known	chr3	-	1458	6	FSM	ENSG00000093183.14	ENST00000423701.6	1458	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	70.2919625561842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-42579843	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42548658_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_65536.known	chr3	+	2134	2	FSM	ENSG00000114857.19	ENST00000459950.1	2134	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGATTGCTGAAGAGTA	42592270	True	NA	NA	False	AAAAAG	-16	NA	42600717	42603056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_42600779_42600983
transcript_65541.known	chr3	-	585	4	FSM	ENSG00000181061.14	ENST00000452906.3	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	1443.72904506197	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGGAGGAGCTTGC	-42778431	True	NA	-115	True	NA	NA	NA	42804433	42785251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804171
transcript_65542.known	chr3	-	2722	4	FSM	ENSG00000181061.14	ENST00000321331.12	2722	4	0	0	0	0	multi-exon	FALSE	canonical	3	2432	junction_3	336.14679333093	1997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAAGTCATGTGACATT	-42778488	True	NA	-4	True	ATTAAA	-17	NA	42804490	42782907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804435
transcript_65544.known	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1460.20363876641	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	-42778486	True	NA	-44	True	NA	NA	NA	42804488	42784329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
transcript_65548.known	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	1580	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	-42778486	True	NA	-1	True	AATGAA	-23	NA	42804488	42784525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42804435
transcript_65555.known	chr3	-	3155	13	FSM	ENSG00000160746.13	ENST00000292246.8	3155	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_10	18.9566391184373	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGAAGGTGAGAAGG	-43619115	True	NA	NA	False	NA	NA	NA	43622011	43365847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_65557.nnic	chr3	-	2556	12	NIC	ENSG00000160746.13	novel	3155	13	NA	NA	-9	9	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	54.5901332168012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTCTGCCTACATAGGT	-43619124	True	NA	-25	True	ATTAAA	-15	NA	43622020	43366338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_43366975_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_65559.known	chr3	-	2419	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	55.3238400034494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGGCAACCTCTCTGA	-43619088	True	NA	-45	True	CATAAA	-17	NA	43621984	43366358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
transcript_65561.known	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_7	58.0514163664312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-43619069	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_65571.nic	chr3	-	777	2	ISM	ENSG00000160746.13	ENST00000414522.6	2450	13	249134	-208	-6669	0	3prime_fragment	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-43372837	True	NA	-34	True	ATTAAA	-6	NA	43372877	43366347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_43366975_43372727
transcript_65574.known	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	11.3639292891539	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	43689997	True	NA	20	True	AATAAA	-13	NA	43690937	43722725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_65576.known	chr3	+	1241	6	FSM	ENSG00000011198.10	ENST00000458276.7	1241	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	38.4832431065782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTACTGAAAAACTGTA	43689939	True	NA	21	True	AATAAA	-17	NA	43690879	43718797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43718442
transcript_65578.known	chr3	+	618	2	FSM	ENSG00000011198.10	ENST00000486764.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATACT	43689951	True	NA	NA	False	AATAAA	-14	NA	43690891	43699745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275
transcript_65579.known	chr3	-	1069	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTCTACACTGGATT	-43999003	True	NA	2	True	ATTAAA	-19	NA	43999149	43998080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43998100_43999100
transcript_65582.known	chr3	+	3306	11	FSM	ENSG00000179152.20	ENST00000412611.6	3306	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	14.9803204238094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTTCTTGTTACCC	44338354	True	NA	8	True	AATAAA	-20	NA	44338756	44409451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_65583.nic	chr3	+	1190	5	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	24.2834820402676	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	44336240	True	NA	11	True	AATAAA	-13	NA	44338110	44363037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_65584.nic	chr3	+	1659	5	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-8	469	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	24.2834820402676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTAGTGATTTTCAT	44336240	True	NA	NA	False	AATAAA	-22	NA	44338110	44363506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_65585.known	chr3	+	1056	5	FSM	ENSG00000179152.20	ENST00000444602.2	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	23.8746727726266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	44338357	True	NA	11	True	AATAAA	-13	NA	44338759	44363037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_65588.known	chr3	+	1998	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.9131825880731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGTTCTGTGAATC	44336248	True	NA	11	True	AATAAA	-23	NA	44338118	44359804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
transcript_65589.known	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.0739601136904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	44338364	True	NA	9	True	AATAAA	-21	NA	44338451	44359802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
transcript_6559.known	chr1	-	9135	9	FSM	ENSG00000265491.5	ENST00000582693.5	9135	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTCTCATTTTGTT	-145824081	False	NA	3	True	AATAAA	-18	NA	145824095	145738867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710_145771920_145784538_145784597_145788907_145788967_145823771
transcript_65592.nnic	chr3	-	1783	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	6	3081	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	13.6633634219397	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506617	True	NA	-4	True	AATAAA	-19	NA	44510630	44491765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44502964_44503057_44510552
transcript_65593.nnic	chr3	-	2116	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-2	3081	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	5.35412613473634	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506625	True	NA	-4	True	AATAAA	-19	NA	44510638	44491765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499473_44500635_44502541_44502669_44510552
transcript_65596.nnic	chr3	-	1696	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-2	3081	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	8.65383665716478	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506625	True	NA	-4	True	AATAAA	-19	NA	44510638	44491765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499893_44500635_44502541_44502669_44510552
transcript_65597.nnic	chr3	-	1699	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-2	3081	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	7.58653778449403	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506625	True	NA	-4	True	AATAAA	-19	NA	44510638	44491765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
transcript_65598.known	chr3	-	1966	5	FSM	ENSG00000178917.17	ENST00000436261.6	1966	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	6.80073525436772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCTTCTTTCTCTTAA	-44506623	True	NA	NA	False	NA	NA	NA	44510636	44498969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44499300_44499301_44500635_44502541_44502669_44502964_44503057_44510552
transcript_656.known	chr1	-	3201	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_10	100.823850793792	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGGCGCTCTTCCGTG	-6679110	True	NA	-16	True	AATAAA	-16	NA	6701816	6634169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_65605.known	chr3	-	1326	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-44506623	True	NA	NA	False	TATAAA	-19	NA	44510636	44499522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44500638_44502541_44502669_44510552
transcript_65609.nnic	chr3	-	1167	2	NNC	ENSG00000178917.17	novel	1966	5	NA	NA	6	-6262	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGATTGTTTCTTCCT	-44506617	True	NA	-1	True	AATAAA	-19	NA	44510630	44505837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44506927_44510552
transcript_65611.known	chr3	+	7530	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	14.2042247236518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624128	True	NA	9	True	AATAAA	-19	NA	44625035	44648471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
transcript_65612.known	chr3	+	2935	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.70786644972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624141	True	NA	9	True	AATAAA	-19	NA	44625048	44648471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_65614.known	chr3	+	5834	3	FSM	ENSG00000144792.9	ENST00000322734.2	5834	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACTTTTTTTTTCTTTT	44583297	True	NA	NA	False	AATAAA	-20	NA	44584963	44599694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44585008_44586104_44586214_44594013
transcript_65618.known	chr3	+	620	4	FSM	ENSG00000169981.11	ENST00000415571.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	11.5566238822398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCATCATATCAGAAAG	44647215	True	NA	NA	False	NA	NA	NA	44648740	44658765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44648835_44650943_44651260_44652556_44652702_44658700
transcript_65619.nic	chr3	+	2626	4	NIC	ENSG00000169981.11	novel	2658	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	14.3836326735943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	44647215	True	NA	25	True	AATAAA	-23	NA	44648740	44660791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_44648812_44650940_44651260_44652556_44652702_44658700
transcript_65621.known	chr3	+	2503	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	44647216	True	NA	25	True	AATAAA	-23	NA	44648741	44660791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44648835_44650940_44651260_44658700
transcript_65623.known	chr3	+	3270	4	FSM	ENSG00000196653.12	ENST00000296091.8	3270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.93310961716756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	44712288	True	NA	11	True	ATTAAA	-22	NA	44712645	44723831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44712745_44714590_44714689_44720202_44720317_44720872
transcript_65624.known	chr3	+	593	3	FSM	ENSG00000196653.12	ENST00000411443.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAATGAATGTGGAAA	44712318	True	NA	NA	False	AGTAAA	-34	NA	44712675	44721282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44712745_44720202_44720317_44720872
transcript_65625.known	chr3	+	3099	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	44728291	True	NA	7	True	AATAAA	-19	NA	44729595	44737083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44729723_44731475_44731561_44734196
transcript_65627.known	chr3	+	3353	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	44728330	True	NA	7	True	AATAAA	-19	NA	44729634	44737083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44730016_44731475_44731561_44734196
transcript_65630.known	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	4	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-44755778	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44753553_44754223_44754369_44761494
transcript_65631.nnic	chr3	-	846	3	NNC	ENSG00000163807.6	novel	5079	3	NA	NA	-2	-4290	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	179.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGTCCTGCTTCTC	-44755780	True	NA	-5	True	TATAAA	-18	NA	44761621	44753033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44753608_44754223_44754369_44761494
transcript_65634.nic	chr3	+	2763	21	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-21	27097	-21	-1331	5prime_fragment	FALSE	canonical	3	151	junction_5	11.1382224793726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGAAACTCTGAAATC	44759091	True	NA	17	True	AAGAAA	-20	NA	44761772	44826159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038
transcript_65638.known	chr3	+	4760	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_21	15.2142712097197	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	44759112	True	NA	9	True	AATAAA	-21	NA	44761793	44853256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_6564.known	chr1	-	2902	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_13	78.2115928391557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-145859065	False	3041	-4	True	AATAAA	-15	NA	145859081	145848521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
transcript_65641.nnic	chr3	+	1094	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	32.2628096868343	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860362	True	NA	12	True	AATAAA	-22	NA	44861863	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
transcript_65643.nnic	chr3	+	1069	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_2	40.185680147148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860362	True	NA	12	True	AATAAA	-22	NA	44861863	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44862357_44862528_44864221_44864344_44865039
transcript_65645.nnic	chr3	+	996	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	41.2148840428633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860387	True	NA	12	True	AATAAA	-22	NA	44861888	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44862430_44862528_44864196_44864344_44865039
transcript_65646.nnic	chr3	+	1166	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	34.4770455037358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860391	True	NA	12	True	AATAAA	-22	NA	44861892	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862117_44862357_44862528_44864196_44864344_44865039
transcript_65649.nnic	chr3	+	1124	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.9393521420909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860391	True	NA	12	True	AATAAA	-22	NA	44861892	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862117_44862399_44862528_44864196_44864344_44865039
transcript_6565.nic	chr1	-	2956	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	277	junction_12	36.8812262820938	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-145856792	True	NA	-4	True	AATAAA	-15	NA	145859833	145848521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
transcript_65651.known	chr3	+	977	3	FSM	ENSG00000169964.8	ENST00000302392.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	40.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860410	True	NA	12	True	AATAAA	-22	NA	44861911	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44862117_44864196_44864344_44865039
transcript_65653.nnic	chr3	+	900	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	40	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860386	True	NA	12	True	AATAAA	-22	NA	44861887	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44864196_44864344_44865039
transcript_65657.nnic	chr3	+	883	3	NNC	ENSG00000169964.8	novel	3071	2	NA	NA	338	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44862227	False	NA	12	True	AATAAA	-22	NA	44862249	44865664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862361_44864196_44864344_44865039
transcript_65662.known	chr3	+	1395	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	370.022106603106	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAATAAAGTTTAGA	44966419	True	NA	-20	True	AAAACA	-30	NA	44976263	45012633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_65668.known	chr3	+	1042	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	79.7682868804184	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	44966399	True	NA	7	True	ATTAAA	-16	NA	44976243	45011471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_65672.known	chr3	-	3101	8	FSM	ENSG00000163812.15	ENST00000296127.7	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	82.630725125064	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGAATGCTGTT	-44970231	True	NA	NA	False	NA	NA	NA	44976182	44924845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44926848_44929305_44929437_44932906_44932991_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_65678.known	chr3	+	831	7	FSM	ENSG00000075914.13	ENST00000468667.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	542.97626303755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCATTTGCTCTCTGCAT	44966406	True	NA	NA	False	AAAACA	-43	NA	44976250	45012253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_6568.known	chr1	+	1473	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	6.88684045325369	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	145845424	True	NA	11	True	AATAAA	-22	NA	145845629	145848954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_65680.known	chr3	-	12594	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_2	33.2536547698979	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGAGTCTCCTGTTT	-44970223	True	NA	-3	True	AATAAA	-21	NA	44976174	44915260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_65686.known	chr3	-	1416	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTGAAAGGTCATTTTT	-45145647	True	NA	3	True	AATAAA	-42	NA	45146422	45110215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
transcript_65689.known	chr3	+	1830	20	FSM	ENSG00000211456.13	ENST00000672858.2	1830	20	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	29.9496345456549	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTTTCCACATCAGCCC	45679263	False	NA	NA	False	NA	NA	NA	45689465	45743735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_65690.known	chr3	+	2013	19	FSM	ENSG00000211456.13	ENST00000441228.5	2013	19	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	120.974043231606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCATTGTATTCTAT	45679152	True	NA	NA	False	ATTAAA	-37	NA	45689354	45743935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_65695.known	chr3	+	854	4	FSM	ENSG00000211456.13	ENST00000463347.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	23.6220236220354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATGAAATGTGTATATA	45679153	True	NA	NA	False	NA	NA	NA	45689355	45707318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779
transcript_65696.known	chr3	-	1384	2	FSM	ENSG00000230530.2	ENST00000655322.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTTTTCTTTCTA	NA	False	NA	2	True	TTTAAA	-24	NA	45689200	45679512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45680072_45688375
transcript_65697.known	chr3	-	4026	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	8.73194786861711	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTTGGAAAATCCTTT	-45840748	True	NA	NA	False	ATTAAA	-25	NA	45842119	45823315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
transcript_65700.known	chr3	-	986	9	FSM	ENSG00000163818.19	ENST00000411866.5	986	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	14.5322916293336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTGTCATATCCCCT	-45840758	True	NA	NA	False	NA	NA	NA	45842129	45826240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45841988
transcript_65702.known	chr3	+	321	3	FSM	ENSG00000288717.1	ENST00000683405.1	321	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGCTGTCAACAGG	45995933	True	NA	NA	False	CATAAA	-25	NA	45995957	46001283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45996036_46000912_46000956_46001083
transcript_65706.known	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	5.04820512657717	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-46565990	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
transcript_65721.known	chr3	+	1192	6	FSM	ENSG00000241186.10	ENST00000542931.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	1858.89988971972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGATTGAATTATAT	46574025	True	NA	NA	False	NA	NA	NA	46574533	46581860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_46574584_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_65729.known	chr3	+	1956	6	FSM	ENSG00000241186.10	ENST00000296145.6	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	3615	junction_2	551.942243355226	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGTGAACTGGTTAT	46537381	True	NA	28	True	AGTAAA	-18	NA	46577787	46582457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_65763.known	chr3	-	402	6	FSM	ENSG00000160799.12	ENST00000605358.5	402	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	260.443928706353	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATGTGGCCAAGAAG	-46976484	False	7552	NA	False	NA	NA	NA	46976501	46922304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976352
transcript_65766.known	chr3	+	3206	7	FSM	ENSG00000114648.12	ENST00000461084.5	3206	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	14.4299072146089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAAGGTAGCA	47281616	True	NA	NA	False	NA	NA	NA	47282945	47338822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534
transcript_65770.known	chr3	-	640	4	FSM	ENSG00000088727.14	ENST00000425452.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.5495978283381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAGCTCACTCACT	-47282148	False	NA	-28	True	NA	NA	NA	47282198	47275251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47275491_47277281_47277380_47280951_47281196_47282139
transcript_65773.known	chr3	+	375	2	FSM	ENSG00000114648.12	ENST00000483201.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	47281629	False	NA	11	True	AGTAAA	-16	NA	47282958	47287458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47283095_47287219
transcript_65775.known	chr3	-	633	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-47282457	True	NA	-4	True	AATAAA	-22	NA	47282766	47275227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47275491_47277281_47277380_47282494
transcript_65776.known	chr3	+	4622	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.3538368109109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	47281614	True	NA	12	True	AATAAA	-17	NA	47282943	47346816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_65777.known	chr3	-	740	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	42.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-47282468	False	NA	-4	True	AATAAA	-22	NA	47282518	47275227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47275491_47277281_47277380_47282139
transcript_65781.nic	chr3	-	1262	2	ISM	ENSG00000114650.21	ENST00000416208.5	1222	7	86	22498	86	-6887	5prime_fragment	FALSE	canonical	3	360	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAGATGAACA	-47470173	True	NA	NA	False	NA	NA	NA	47475851	47441882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_47443092_47475798
transcript_65788.nic	chr3	-	1573	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_6	92.6146436705461	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513364	False	NA	-1	True	AATAAA	-19	NA	47513388	47495639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512991
transcript_65789.nic	chr3	-	1347	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	98.1048192269654	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513337	False	1465	-1	True	AATAAA	-19	NA	47513361	47495639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_65791.known	chr3	-	880	7	FSM	ENSG00000163832.16	ENST00000439305.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	94.8093115445712	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGTGGAAGATAGAGCAA	-47513389	False	NA	NA	False	NA	NA	NA	47513413	47496028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513320
transcript_65792.known	chr3	-	1352	7	FSM	ENSG00000163832.16	ENST00000296149.9	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	53.3468732812795	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513688	False	NA	-1	True	AATAAA	-19	NA	47513712	47495639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_65798.known	chr3	-	1277	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	100.633195318443	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTGTGGGTTGTCTT	-47512244	True	NA	-2	True	AATAAA	-18	NA	47513709	47495640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
transcript_6581.nic	chr1	-	1408	5	ISM	ENSG00000198483.13	ENST00000355594.9	3359	14	12941	0	12941	0	3prime_fragment	FALSE	canonical	3	102	junction_4	12.369316876853	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCTGAGTGTAATTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	145872925	145866563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981
transcript_65814.known	chr3	-	557	5	FSM	ENSG00000163832.16	ENST00000414236.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	111.905093717846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGGCGGTGGCTGTGCT	-47513318	False	1465	NA	False	NA	NA	NA	47513342	47501715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_65815.nic	chr3	-	886	5	ISM	ENSG00000163832.16	ENST00000296149.9	1352	7	-31	5802	-31	85	5prime_fragment	FALSE	canonical	3	137	junction_4	59.4369413748722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTCAGTGGGGCTGGT	NA	False	NA	-4	True	AATAAA	-14	NA	47513743	47501441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_65817.known	chr3	-	487	3	FSM	ENSG00000163832.16	ENST00000494161.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	140	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCATGGAACTGCCTTC	-47512237	True	NA	NA	False	ACTAAA	-2	NA	47513702	47501649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47501852_47504329_47504449_47513536
transcript_65818.known	chr3	-	553	3	FSM	ENSG00000163832.16	ENST00000483205.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	55	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-47512246	True	NA	NA	False	NA	NA	NA	47513711	47509955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47510255_47511147_47511227_47513536
transcript_65820.known	chr3	+	3887	23	FSM	ENSG00000132153.15	ENST00000395745.6	3887	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	226.582866639438	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	47796704	True	NA	20	True	AATAAA	-20	NA	47803133	47850192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_65821.known	chr3	+	3855	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	164.989850577697	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTCCACTAGGGG	47796708	True	NA	21	True	AATAAA	-21	NA	47803137	47850193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_65823.known	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	86.0122730260694	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	47818996	True	NA	15	True	AATAAA	-15	NA	47825027	47850187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_65824.known	chr3	+	1957	9	FSM	ENSG00000132153.15	ENST00000441384.5	1957	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	297.78177307384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTGGCGTTTCCTT	47796708	True	NA	3	True	AATAAA	-17	NA	47803137	47842679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616
transcript_65827.nnic	chr3	+	567	4	NNC	ENSG00000132153.15	novel	1464	4	NA	NA	-9	-792	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	239.115035077261	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTATAATATTATAAGAG	47803086	False	NA	98	True	AATAAA	-16	NA	47803097	47816180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_47803213_47805325_47805421_47810572_47810712_47815962
transcript_65828.known	chr3	+	1464	4	FSM	ENSG00000132153.15	ENST00000472718.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	118.852850197208	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTTCAGCTCCT	47802898	False	NA	47	True	NA	NA	NA	47802908	47816972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962
transcript_6583.known	chr1	+	1178	8	FSM	ENSG00000121851.13	ENST00000369314.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.05339325111737	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTGGGTGAGGCC	145963976	True	NA	16	True	AATAAA	-16	NA	145964689	145978848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977083_145977153_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_65831.known	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_6	68.2615928742393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-48088987	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_65833.known	chr3	-	899	6	FSM	ENSG00000047849.22	ENST00000423088.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	181.548230506386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCACAGAAACAGATGTAT	-48074634	True	NA	NA	False	AAAAAG	-29	NA	48088801	47916861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47917175_47918718_47918842_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_65835.known	chr3	-	913	7	FSM	ENSG00000172113.10	ENST00000415053.5	913	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	62.4804413841288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGTGGTTCAGAAGAA	-48299629	True	NA	NA	False	NA	NA	NA	48301325	48294446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300526_48300635_48301278
transcript_65838.known	chr3	-	613	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	51.9669125501987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATGTAGCTGGAACAGG	-48299657	True	NA	NA	False	NA	NA	NA	48301353	48294675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
transcript_65839.known	chr3	-	2004	6	FSM	ENSG00000172113.10	ENST00000421967.5	2004	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	44.5448089007013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTATCTGAAAGCATCA	-48299662	True	NA	NA	False	TATAAA	-3	NA	48301358	48293263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
transcript_65840.known	chr3	-	2903	6	FSM	ENSG00000172113.10	ENST00000442597.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	47.1889817648145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	-48299671	True	NA	NA	False	AATAAA	-21	NA	48301367	48292316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
transcript_6585.known	chr1	+	818	7	FSM	ENSG00000121851.13	ENST00000369313.7	818	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	26.2387542048441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAATAGAGGATGATGAC	145963989	True	NA	NA	False	NA	NA	NA	145964702	145978570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_65854.known	chr3	+	917	5	FSM	ENSG00000164048.14	ENST00000440261.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	298.969480047713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATTTGGAACATGGA	48224157	True	NA	NA	False	NA	NA	NA	48241105	48286630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267917_48268161_48286245
transcript_65858.known	chr3	-	599	5	FSM	ENSG00000172113.10	ENST00000435684.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGACCAGCCTGATG	-48299671	True	NA	NA	False	NA	NA	NA	48301367	48294654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301278
transcript_65860.known	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
transcript_65864.known	chr3	+	3367	4	FSM	ENSG00000164048.14	ENST00000354698.8	3367	4	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	224.572680637893	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	48224155	True	NA	25	True	AATGAA	-38	NA	48241103	48270990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914
transcript_65868.nnic	chr3	+	408	4	NNC	ENSG00000164048.14	novel	3367	4	NA	NA	0	-5576	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	303.597687006267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAGTCTATATTGTT	48224155	True	NA	3	True	ATTAAA	-18	NA	48241103	48281054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_48241215_48247624_48247678_48260812_48260940_48280937
transcript_65870.known	chr3	+	1677	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	254.664921459989	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	48224151	True	NA	NA	False	AATAAA	-26	NA	48241099	48287627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
transcript_65871.known	chr3	+	593	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	214.233517452335	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	48224152	True	NA	17	True	AATAAA	-19	NA	48241100	48299253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
transcript_65878.known	chr3	-	1209	5	FSM	ENSG00000172113.10	ENST00000426689.6	1209	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	28.8649874415355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATGCTGCCACAT	-48298514	False	NA	-19	True	AATAAA	-17	NA	48298524	48293996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426
transcript_65886.known	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_3	75.6615269913757	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-48435129	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
transcript_65887.known	chr3	-	1385	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	125.158566093842	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGAGTTTTTTTCAT	-48435167	True	NA	-2	True	ATTAAA	-29	NA	48440119	48432169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
transcript_65888.known	chr3	-	1611	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.3480121423084	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	-48435167	True	NA	-5	True	ATTAAA	-26	NA	48440119	48432172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
transcript_65892.known	chr3	+	561	4	FSM	ENSG00000232112.3	ENST00000438607.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	12791	junction_1	2775.25089956846	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTTCTTGTGTGGTTGT	48325339	True	NA	14	True	ATTAAA	-19	NA	48440256	48444208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847
transcript_65893.known	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	17596	junction_1	881	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	48325366	True	NA	9	True	ATTAAA	-14	NA	48440283	48444203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48440459_48440540_48440629_48443847
transcript_65897.known	chr3	+	1096	2	FSM	ENSG00000213689.14	ENST00000625293.3	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	48466176	True	NA	4	True	AATAAA	-19	NA	48466229	48467645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48466310_48466629
transcript_65898.known	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_4	420.79477183064	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48499896	True	NA	-42	True	AATAAA	-15	NA	48504174	48467875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
transcript_65899.known	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	549.052492936695	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-48504701	True	NA	-43	True	AATAAA	-14	NA	48504795	48467876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
transcript_65904.known	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_3	202.407180373293	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48461864	True	NA	-42	True	AATAAA	-15	NA	48473208	48467875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
transcript_65905.known	chr3	-	1739	4	FSM	ENSG00000164054.17	ENST00000465449.5	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	649.482015831762	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48473480	False	NA	-42	True	AATAAA	-15	NA	48473532	48467875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473433
transcript_65906.known	chr3	-	2081	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	550.468382379951	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	-48504732	True	NA	-36	True	AATAAA	-21	NA	48504826	48467869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
transcript_65908.known	chr3	-	3499	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_11	13.6853915116961	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-48554934	True	NA	-18	True	AATAAA	-18	NA	48556803	48517683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_6591.known	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_4	976.461898898262	2346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	-145895525	True	NA	70	True	NA	NA	NA	145927460	145925641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
transcript_65916.known	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_12	226.916452442058	1204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	-48589158	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
transcript_65924.known	chr3	-	2630	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	0	0	0	multi-exon	FALSE	canonical	1	69	junction_5	53.7580459094264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632465	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_65928.known	chr3	-	2611	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	0	0	0	multi-exon	FALSE	canonical	1	69	junction_5	55.8269424203046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632443	True	NA	-5	True	AATAAA	-16	NA	48635461	48625722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_65949.nic	chr3	-	1766	6	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	324	junction_5	43.6394317103236	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702876	True	NA	-2	True	AATACA	-20	NA	48717244	48688002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48717156
transcript_65950.known	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_5	22.5973449767888	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702853	True	NA	-2	True	AATACA	-20	NA	48717221	48688002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
transcript_65978.nic	chr3	-	1335	4	NIC	ENSG00000068745.15	novel	1309	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_1	75.1236018542479	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	-48717290	True	NA	-5	True	AATAAA	-16	NA	48717307	48693452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48694458_48694526_48695089_48695419_48717156
transcript_65979.known	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	101.6267681273	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	-48717261	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
transcript_65980.known	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	108.894444302728	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	-48702835	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
transcript_65981.nic	chr3	-	1314	4	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	136.465705907707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	-48702854	True	NA	-8	True	AATAAA	-13	NA	48717222	48693455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48694693_48694825_48695089_48695422_48717156
transcript_65985.nic	chr3	-	983	4	NIC	ENSG00000068745.15	novel	1309	4	NA	NA	2	68	combination_of_known_junctions	FALSE	canonical	3	140	junction_1	75.1236018542479	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTCTTGTGCTGTGTGG	-48702851	True	NA	-5	True	NA	NA	NA	48717219	48693716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48694458_48694526_48695089_48695419_48717156
transcript_65989.nic	chr3	-	934	4	NIC	ENSG00000068745.15	novel	1309	4	NA	NA	-1	16	combination_of_known_junctions	FALSE	canonical	3	140	junction_1	75.1236018542479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGCCTGGGTGCCTAC	-48702854	True	NA	45	True	AATAAA	-18	NA	48717222	48693768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48694458_48694526_48695089_48695419_48717156
transcript_6599.known	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	3.09120616516523	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-145886782	False	31935	-2	True	ATTAAA	-19	NA	145918717	145911349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
transcript_65997.nic	chr3	-	1187	3	NIC	ENSG00000068745.15	novel	1185	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	61	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-48702853	True	NA	0	True	AATAAA	-21	NA	48717221	48693447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_65998.known	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	92	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-48702848	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48695089_48695422_48717156
transcript_66.known	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2957	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00171_+_0_500
transcript_66001.known	chr3	-	2490	9	FSM	ENSG00000068745.15	ENST00000433104.2	2490	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	126.358369331042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	-48740342	False	NA	-8	True	AATAAA	-13	NA	48740353	48693455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48694693_48695422_48717156_48717488_48717869_48717890_48718647_48718758_48729654_48729778_48738881_48738967_48739586_48739747_48740205
transcript_66006.nic	chr3	-	866	3	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	61	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGCCTGGGTGCCTAC	-48702853	True	NA	45	True	AATAAA	-18	NA	48717221	48693768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_66014.known	chr3	-	1124	2	FSM	ENSG00000068745.15	ENST00000417896.1	1124	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGGTGCCTTTCTCT	-48702838	True	NA	78	True	NA	NA	NA	48717206	48694344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48695419_48717156
transcript_66015.known	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	-48702824	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48695422_48717156
transcript_66021.known	chr3	-	1778	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	3.99804639792987	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTATATTTTCTT	-48898381	True	NA	-2	True	AATAAA	-25	NA	48898882	48856925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
transcript_66028.known	chr3	+	2278	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	120.151060518624	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909215	True	NA	-56	True	NA	NA	NA	48918835	48983620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_66037.known	chr3	+	4912	16	FSM	ENSG00000177479.20	ENST00000356401.9	4912	16	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	92.1286540056289	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGATCTCTGCTCA	48909221	True	NA	NA	False	NA	NA	NA	48918841	48986382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48918999_48922747_48922812_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_66051.known	chr3	+	1771	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_6	26.9278550018378	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCGATAGGTGCAGCGG	48989723	True	NA	65	True	NA	NA	NA	48990240	49007153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
transcript_66059.known	chr3	+	4070	6	FSM	ENSG00000178252.19	ENST00000608424.6	4070	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	63.5213349985656	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTCTATGCCTCA	48997492	True	NA	13	True	AATAAA	-18	NA	49007390	49015951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_6606.known	chr1	-	2905	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_5	13.0587370080302	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGATGGCTTTGG	-145995869	True	NA	NA	False	AATAAA	-23	NA	145996579	145992434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
transcript_66061.known	chr3	+	3916	6	FSM	ENSG00000178252.19	ENST00000452875.5	3916	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	243.10935810865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGCTCAGTGGAGGG	48997498	True	NA	95	True	NA	NA	NA	49007396	49015589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49007532_49011420_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_66065.known	chr3	+	902	5	FSM	ENSG00000178057.15	ENST00000326925.11	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_3	76.0476824104456	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTTTTTCTTTT	49017574	True	NA	5	True	NA	NA	NA	49022120	49023495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49022222_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_66066.nic	chr3	+	1570	4	ISM	ENSG00000177479.20	ENST00000449376.5	2278	17	-15	54953	0	711	5prime_fragment	FALSE	canonical	3	285	junction_3	215.7884766772	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACTAAGGTGTGCCT	48909200	True	NA	3	True	AATAAA	-20	NA	48918820	48928667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461
transcript_66072.nic	chr3	+	1452	3	ISM	ENSG00000177479.20	ENST00000430423.5	753	6	0	38480	0	715	5prime_fragment	FALSE	canonical	3	335	junction_2	220.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAAGGTGTGCCTTGTA	48909200	True	NA	7	True	AATAAA	-24	NA	48918820	48928671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_48918999_48922747_48922812_48927461
transcript_66075.known	chr3	-	1042	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTGGCTGGTCGCT	-48918699	True	NA	NA	False	AATAAA	-35	NA	48918823	48917781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48917800_48918800
transcript_66076.known	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_3	34.2593414901519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016736	True	NA	-4	True	AATAAA	-21	NA	49018580	49015487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_66077.known	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	777.639760389588	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985544	True	NA	32	True	AATAAA	-18	NA	49029426	49024324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_66080.known	chr3	-	1662	14	FSM	ENSG00000178035.13	ENST00000678724.1	1662	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_11	930.149106835429	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985530	True	NA	32	True	AATAAA	-18	NA	49029412	49024324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_6609.nic	chr1	-	1667	2	ISM	ENSG00000168509.20	ENST00000336751.11	2126	4	2125	0	2124	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTGCCTATGTTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	146019610	146017469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_146018701_146019174
transcript_66090.known	chr3	-	1628	14	FSM	ENSG00000178035.13	ENST00000679117.1	1628	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	634.43961202133	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028766_49029252
transcript_66091.known	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	258.302904614997	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985516	True	NA	32	True	AATAAA	-18	NA	49029398	49024324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_66096.known	chr3	-	1538	13	FSM	ENSG00000178035.13	ENST00000442157.2	1538	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	655.871996954352	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985496	True	NA	14	True	NA	NA	NA	49029378	49024342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_661.known	chr1	+	1366	6	FSM	ENSG00000041988.16	ENST00000054650.9	1361	6	-2	-3	-2	3	multi-exon	FALSE	canonical	0	0	junction_1	44.2248798754728	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTCCCATCATCATTT	6624837	True	NA	17	True	AATAAA	-17	NA	6624865	6633565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6624955_6625149_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
transcript_6610.known	chr1	+	2063	4	FSM	ENSG00000233396.9	ENST00000611275.6	2067	4	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAATGTCCTTTTCT	146052299	True	NA	NA	False	ATTAAA	-16	NA	146052593	146061948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_146052949_146058312_146058462_146058557_146059663_146061494
transcript_66103.known	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	262.938152846296	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_6611.known	chr1	+	668	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGTTCTCCT	146387129	True	NA	8	True	AATAAA	-18	NA	146387201	146388092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_146387323_146387545
transcript_66119.known	chr3	-	1657	14	FSM	ENSG00000178035.13	ENST00000677010.1	1657	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	795.96486794702	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985516	True	NA	14	True	NA	NA	NA	49029398	49024342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026598_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028721_49028807_49029252
transcript_6612.known	chr1	+	164	1	FSM	ENSG00000273768.1	ENST00000615842.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTAGTTTAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	146376806	146376970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_146376800_146377000
transcript_66120.known	chr3	-	643	4	FSM	ENSG00000178035.13	ENST00000484872.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	2195	junction_2	105.395551244928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-49025215	False	NA	14	True	NA	NA	NA	49025243	49024342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024579_49024658_49024803_49024895_49025041_49025125
transcript_66122.known	chr3	-	3257	10	FSM	ENSG00000198218.11	ENST00000395443.7	3257	10	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_9	41.3413970628849	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTGAACAACGTCTCT	-49085818	True	NA	-8	True	NA	NA	NA	49094071	49029706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49093911
transcript_66124.known	chr3	-	2449	24	FSM	ENSG00000172053.18	ENST00000306125.12	2449	24	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_23	102.016122377557	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	-49090347	True	NA	-3	True	AATAAA	-22	NA	49104757	49095931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_66125.known	chr3	-	2399	24	FSM	ENSG00000172053.18	ENST00000430182.5	2399	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	199.36867275191	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	-49090347	True	NA	-4	True	AATAAA	-21	NA	49104757	49095932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372_49104472_49104616
transcript_66126.nic	chr3	-	2627	24	NIC	ENSG00000172053.18	novel	2449	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_22	195.500453250554	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	NA	False	NA	-3	True	AATAAA	-22	NA	49104809	49095931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49104099_49104323_49104472_49104616
transcript_6613.known	chr1	-	5343	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	25.0363001765559	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	-147172409	False	773	NA	False	AATAAA	-19	NA	147172470	147155105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
transcript_66140.nic	chr3	-	2375	23	NIC	ENSG00000172053.18	novel	2449	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	178.685512554024	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	NA	False	NA	-3	True	AATAAA	-22	NA	49104809	49095931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_66154.known	chr3	-	2362	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_11	87.6464653740354	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-49104494	False	NA	-10	True	AATAAA	-15	NA	49104532	49095938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
transcript_66155.known	chr3	-	412	2	FSM	ENSG00000172037.14	ENST00000484713.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCTGGACTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	49121596	49121114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49121363_49121432
transcript_66156.known	chr3	-	1791	2	FSM	ENSG00000177352.10	ENST00000321895.7	1791	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGTCTCCCTGCCCA	-49161377	True	NA	NA	False	NA	NA	NA	49166331	49162534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49164261_49166266
transcript_66157.nic	chr3	+	1666	6	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	22.4445984593176	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49171129	True	NA	14	True	AGTAAA	-18	NA	49171559	49176486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49171686_49172635_49172802_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_66158.known	chr3	+	1972	6	FSM	ENSG00000185909.15	ENST00000332780.4	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	3.13687742827162	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49171167	True	NA	14	True	AGTAAA	-18	NA	49171597	49176486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_66159.nic	chr3	+	2040	6	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	20.8480214888608	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49171129	True	NA	14	True	AGTAAA	-18	NA	49171559	49176486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49171686_49172635_49173176_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_6616.known	chr1	+	2981	22	FSM	ENSG00000237188.5	ENST00000650785.1	2981	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	250.551319531191	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATAATAATAAATTTTCT	147173345	True	NA	-15	True	NA	NA	NA	147173361	147295734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147173560_147174423_147174586_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66163.known	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	50.3283549369299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-49337036	True	NA	NA	False	NA	NA	NA	49340053	49277143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66167.known	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	52.3656375880214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	-49337016	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66170.known	chr3	-	1454	7	FSM	ENSG00000114316.13	ENST00000415188.1	1454	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	102.988133081222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCATCCCAGAACCCAAA	-49337019	True	NA	NA	False	NA	NA	NA	49340036	49316731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49317479_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66171.known	chr3	-	1536	7	FSM	ENSG00000114316.13	ENST00000416417.5	1536	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.441100244429	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCTTTTTGTAATTTA	-49337019	True	NA	NA	False	AATAAA	-23	NA	49340036	49311784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49312614_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66173.known	chr3	-	899	2	FSM	ENSG00000233276.8	ENST00000419783.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_1	0	4052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTATGTCCTGTGTC	-49355743	True	NA	-8	True	AATAAA	-20	NA	49358353	49357175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49357748_49358026
transcript_66174.known	chr3	-	580	2	FSM	ENSG00000233276.8	ENST00000496791.2	580	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGCCAGCTCCCAGCG	-49358205	False	NA	NA	False	NA	NA	NA	49358325	49357607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49357889_49358026
transcript_66175.known	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	-49358205	False	NA	-33	True	NA	NA	NA	49358325	49357200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49357748_49358164
transcript_66176.known	chr3	-	1135	1	FSM	ENSG00000233276.8	ENST00000419349.2	1135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTATGTCCTGTG	-49358192	False	NA	-10	True	AATAAA	-18	NA	49358312	49357177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49357200_49358300
transcript_66177.known	chr3	-	1944	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1118.3048958133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTGTTGTTTGTGTTG	-49349827	True	NA	-4	True	AATAAA	-21	NA	49411970	49359138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_66186.known	chr3	-	1971	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1190.21951756808	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49411611	False	NA	-10	True	AATAAA	-15	NA	49411645	49359144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
transcript_66187.known	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1022.40901184409	2822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49349833	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_6619.known	chr1	+	2967	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	150.414166512345	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232565	True	NA	13	True	AATAAA	-15	NA	147242683	147295762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66194.known	chr3	-	1641	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1055.2485752445	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349785	True	NA	-5	True	AATAAA	-20	NA	49411928	49359139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
transcript_66197.known	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	38	junction_2	1.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	49412191	False	NA	3	True	ATTAAA	-12	NA	49412205	49416475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49412641_49413055_49413111_49414819
transcript_66198.known	chr3	-	1582	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	763.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349857	True	NA	-5	True	AATAAA	-20	NA	49412000	49359139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49375433_49375592_49411819
transcript_66203.known	chr3	-	1646	10	FSM	ENSG00000145020.16	ENST00000427987.6	1646	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	182.876872833292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCCCTGGTATGCA	-49418691	True	NA	-81	True	NA	NA	NA	49422458	49416852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66204.known	chr3	-	1831	10	FSM	ENSG00000145020.16	ENST00000395338.7	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	151.372241694293	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	-49418787	True	NA	-6	True	ATTAAA	-19	NA	49422554	49416777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66210.known	chr3	-	2076	9	FSM	ENSG00000145020.16	ENST00000636871.1	2076	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	160.540444670494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-49418626	True	NA	-22	True	ATTAAA	-3	NA	49422393	49416793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66219.known	chr3	-	1827	9	FSM	ENSG00000145020.16	ENST00000636070.1	1827	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	211.352785645233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCACTGAATCCTGAAAA	-49418684	True	NA	-54	True	NA	NA	NA	49422451	49416825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49421981_49422050_49422360
transcript_66221.known	chr3	-	2038	9	FSM	ENSG00000145020.16	ENST00000538581.6	2038	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_8	147.080707011491	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTAGCTTCATTGTTC	-49418762	True	NA	-7	True	ATTAAA	-18	NA	49422529	49416778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66222.known	chr3	-	1997	9	FSM	ENSG00000145020.16	ENST00000273588.9	1997	9	0	0	0	0	multi-exon	TRUE	canonical	3	354	junction_3	81.6375373219942	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	-49418706	True	NA	-6	True	ATTAAA	-19	NA	49422473	49416777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66232.known	chr3	-	1620	8	FSM	ENSG00000145020.16	ENST00000636522.1	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	176.340463829699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCCACATTCCCAAGT	-49418706	True	NA	NA	False	NA	NA	NA	49422473	49416986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422360
transcript_66235.known	chr3	-	1783	8	FSM	ENSG00000145020.16	ENST00000638063.1	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	160.725015514838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCAGGGTGGGCTTCCT	-49418693	True	NA	-126	True	NA	NA	NA	49422460	49416897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103_49422272_49422360
transcript_66237.known	chr3	-	2379	8	FSM	ENSG00000145020.16	ENST00000476226.6	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_7	157.096616573291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-49418696	True	NA	-22	True	ATTAAA	-3	NA	49422463	49416793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66241.known	chr3	-	1991	8	FSM	ENSG00000145020.16	ENST00000637114.1	1991	8	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_7	69.4670675168295	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGATCTTTGCCCCT	-49418675	True	NA	-89	True	NA	NA	NA	49422442	49416860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66244.known	chr3	-	1823	8	FSM	ENSG00000145020.16	ENST00000637682.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	181.740339551813	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTAGCTTCATTGTT	-49418690	True	NA	-8	True	ATTAAA	-17	NA	49422457	49416779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66248.known	chr3	-	2662	7	FSM	ENSG00000145020.16	ENST00000637291.1	2662	7	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	91.131163105103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	-49418691	True	NA	-52	True	NA	NA	NA	49422458	49416823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66253.known	chr3	-	2448	7	FSM	ENSG00000145020.16	ENST00000638092.1	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	164.121905911429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	-49418687	True	NA	-52	True	NA	NA	NA	49422454	49416823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66254.known	chr3	-	2468	7	FSM	ENSG00000145020.16	ENST00000637994.1	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_6	68.3042621087603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	-49418693	True	NA	-52	True	NA	NA	NA	49422460	49416823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66264.known	chr3	-	1921	7	FSM	ENSG00000145029.14	ENST00000615713.4	1921	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	9.97914491994847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGCTGGCTGCCTGTG	-49427551	True	NA	-4	True	AATAAA	-15	NA	49429288	49422946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49423506_49424161_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_66265.known	chr3	-	2040	7	FSM	ENSG00000145029.14	ENST00000423832.5	2040	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.97914491994847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTGGTATGCAGT	-49427571	True	NA	-50	True	NA	NA	NA	49429308	49422992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49423564_49424074_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_66267.known	chr3	-	2768	6	FSM	ENSG00000145020.16	ENST00000635772.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_5	71.9155059775011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-49418687	True	NA	-50	True	NA	NA	NA	49422454	49416821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66269.known	chr3	-	1509	6	FSM	ENSG00000145020.16	ENST00000636597.1	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	213.116869346375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCCTTCTTACTTG	-49418724	True	NA	-29	True	NA	NA	NA	49422491	49416800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66272.known	chr3	-	3227	6	FSM	ENSG00000145029.14	ENST00000273598.8	3227	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.31740662898458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGGGAAGCGGCTG	-49427587	True	NA	NA	False	NA	NA	NA	49429324	49422332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_66278.nnic	chr3	-	893	3	NNC	ENSG00000145029.14	novel	3227	6	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-49427580	True	NA	-3	True	AATAAA	-16	NA	49429317	49422945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_49423539_49426338_49426429_49429107
transcript_66279.nnic	chr3	-	873	3	NNC	ENSG00000145029.14	novel	3227	6	NA	NA	7	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-49427580	True	NA	-3	True	AATAAA	-16	NA	49429317	49422945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_49423539_49426358_49426429_49429107
transcript_66280.known	chr3	-	2110	9	FSM	ENSG00000145020.16	ENST00000478594.6	2110	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	193.729192431084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-49418702	True	NA	-50	True	NA	NA	NA	49422469	49416821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66284.known	chr3	+	2879	22	FSM	ENSG00000164062.13	ENST00000296456.10	2879	22	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_1	145.809274983458	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTCTGACAAGAAGTT	49659937	True	NA	2	True	CATAAA	-14	NA	49674350	49683971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49674414_49674488_49674622_49675182_49675310_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_66299.nic	chr3	+	2316	21	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_2	309.251095390138	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	49674035	False	NA	25	True	AATAAA	-13	NA	49674318	49683503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49674414_49674488_49674622_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_663.nic	chr1	-	1099	6	ISM	ENSG00000007923.17	ENST00000426784.1	975	8	-53	6615	-32	235	5prime_fragment	FALSE	canonical	3	808	junction_1	90.4513128705161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCCTGTCAGTCTTCCT	-6679149	True	NA	NA	False	AATAAA	-25	NA	6701855	6652414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_66310.nic	chr3	+	2153	20	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	314.331881704602	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	49659935	True	NA	25	True	AATAAA	-13	NA	49674348	49683503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49674414_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_66328.known	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	67.2283743741261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-49721358	True	NA	-15	True	AATAAA	-23	NA	49723951	49716843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
transcript_6633.known	chr1	+	2841	22	FSM	ENSG00000131778.20	ENST00000651420.1	2841	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	196.443999394125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232582	True	NA	11	True	AATAAA	-13	NA	147242700	147295760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66330.known	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	19.5176202442818	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-49721358	True	NA	-7	True	AATAAA	-19	NA	49723951	49719915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_66332.known	chr3	-	3217	8	FSM	ENSG00000173540.14	ENST00000308375.10	3217	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	18.8289833035376	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAGACATTCTTCCA	-49721358	True	NA	-15	True	AATAAA	-11	NA	49723951	49719923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_66338.known	chr3	-	2048	6	FSM	ENSG00000173540.14	ENST00000678010.1	2048	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	96.2899787101441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGTGCCAGGTGCTGG	-49721328	True	NA	NA	False	GGGGCT	-4	NA	49723921	49720615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49721884_49721964_49722148_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_6634.known	chr1	+	2827	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	191.543249232466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232554	True	NA	-25	True	AATATA	-40	NA	147242672	147295724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66340.known	chr3	-	2856	1	FSM	ENSG00000176020.9	ENST00000320431.8	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCCTCCGTGTGTTC	-49717091	False	2593	0	True	AATAAA	-38	NA	49719684	49716828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49716800_49719700
transcript_66341.known	chr3	-	4471	6	FSM	ENSG00000176095.12	ENST00000321599.9	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	15.3805071437843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTCTGTCTTTGTGAA	-49781564	True	NA	-1	True	AATAAA	-16	NA	49786542	49724293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_66343.known	chr3	-	4117	5	FSM	ENSG00000176095.12	ENST00000395238.5	4117	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	54.6214243680994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGAGTCTGTCTTTGTGA	-49781562	True	NA	-2	True	AATAAA	-15	NA	49786540	49724294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49786353
transcript_66346.known	chr3	+	1033	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	49802976	True	NA	NA	False	AATAAA	-17	NA	49803260	49805030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49803444_49804180
transcript_66349.known	chr3	-	2023	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_11	24.1564838974076	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854279	True	NA	-7	True	AATAAA	-19	NA	49856564	49828600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_66358.nic	chr3	-	2238	14	NIC	ENSG00000183763.9	novel	2023	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	106	junction_10	24.765408209577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAACAA	-49854282	True	NA	-27	True	NA	NA	NA	49856567	49828620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_6636.known	chr1	+	2461	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	201.593179448115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	147232579	True	NA	NA	False	AATAGA	-9	NA	147242697	147295585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66361.nnic	chr3	-	1729	12	NIC	ENSG00000183763.9	novel	2023	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	46.2406568628457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854282	True	NA	-7	True	AATAAA	-19	NA	49856567	49828600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_66367.known	chr3	-	2905	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	113.922040909381	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862033	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_66369.known	chr3	-	2998	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	112.964109344517	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862033	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_6637.known	chr1	+	2782	21	FSM	ENSG00000131778.20	ENST00000467213.5	2782	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	199.758422851203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232565	True	NA	13	True	AATAAA	-15	NA	147242683	147295762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66374.known	chr3	-	2370	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-334	-11	28	11	multi-exon	FALSE	canonical	3	64	junction_5	4.40908153700972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCACTTGTCCCTT	NA	False	NA	4	True	ATTAAA	-25	NA	49930145	49908861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
transcript_66375.known	chr3	-	1617	5	FSM	ENSG00000164077.15	ENST00000455683.7	1617	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	24.0572234474388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-49929256	False	NA	-7	True	ATTAAA	-14	NA	49929889	49908872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49913219_49913360_49929608
transcript_66376.nnic	chr3	-	1332	5	NIC	ENSG00000164077.15	novel	2527	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	29.9447407736317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-49929251	True	NA	-7	True	ATTAAA	-14	NA	49929884	49908872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_49909155_49909252_49909401_49911525_49912012_49913219_49913360_49929608
transcript_66378.known	chr3	+	4010	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	221.07606722574	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928666	True	NA	9	True	AATAAA	-16	NA	49940040	50077248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_66380.known	chr3	+	3630	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	204.975608304988	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	49928775	True	NA	10	True	AATAAA	-17	NA	49940149	50077249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_66386.known	chr3	+	2324	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	227.791686567214	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928727	True	NA	9	True	AATAAA	-16	NA	49940101	50077248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_6639.known	chr1	+	2663	21	FSM	ENSG00000131778.20	ENST00000652357.1	2663	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	191.251771233628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232584	True	NA	4	True	AATAAA	-6	NA	147242702	147295753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66394.known	chr3	+	2260	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_2	196.273048009654	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	NA	False	NA	10	True	AATAAA	-17	NA	49940006	50077249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_6640.known	chr1	+	2717	21	FSM	ENSG00000131778.20	ENST00000650828.1	2717	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	231.746731368535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232579	True	NA	4	True	AATAAA	-6	NA	147242697	147295753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147255812_147255928_147256530_147256563_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66410.known	chr3	+	1886	8	FSM	ENSG00000004534.15	ENST00000425608.5	1886	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	117.356425526023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGAAGGCCAAGAGTCA	49928776	True	NA	NA	False	NA	NA	NA	49940150	50057853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727
transcript_66419.known	chr3	+	581	2	FSM	ENSG00000004534.15	ENST00000493652.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGCTTGCAGTGAGC	49928722	True	NA	NA	False	NA	NA	NA	49940096	49963027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575
transcript_66421.known	chr3	+	3177	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	57.0430514806337	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	50085671	True	NA	74	True	NA	NA	NA	50088918	50119021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_66425.nic	chr3	+	3044	24	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_5	67.9071143656869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	50085666	True	NA	10	True	AAGAAA	-10	NA	50088913	50118957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_66428.nic	chr3	+	2311	2	ISM	ENSG00000003756.17	ENST00000492472.1	902	4	-61	1754	-5	-1275	intron_retention	TRUE	canonical	3	224	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGAAATAATGGCCAG	50085666	True	NA	NA	False	NA	NA	NA	50088913	50092576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_50089030_50090381
transcript_66429.known	chr3	+	2716	5	FSM	ENSG00000003756.17	ENST00000469838.5	2716	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	16.3171688720807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCTGTTAAATGAAG	50085671	True	NA	NA	False	AAAAAG	-5	NA	50088918	50102194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_66430.known	chr3	+	2953	16	FSM	ENSG00000188338.15	ENST00000614032.5	2953	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTAGTAGTCCCTGTG	50205166	True	NA	NA	False	AATAAA	-1	NA	50205270	50221486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50205349_50214148_50214301_50214401_50214484_50214652_50214769_50215385_50215460_50215543_50215637_50215739_50215822_50217237_50217321_50217414_50217474_50217675_50217841_50217916_50217997_50218269_50218371_50218592_50218718_50218803_50218949_50219880_50219985_50220072
transcript_66431.known	chr3	+	2407	9	FSM	ENSG00000114353.17	ENST00000422163.5	2407	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	392.513833354953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTGCAAAT	50226093	True	NA	15	True	AGTAAA	-3	NA	50226291	50258898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50227194_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_66433.known	chr3	+	2219	9	FSM	ENSG00000114353.17	ENST00000313601.11	2219	9	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	62.4558594128685	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGTATTCTCTCCCA	50219063	True	NA	15	True	AATAAA	-28	NA	50236203	50259362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_66438.known	chr3	-	1943	12	FSM	ENSG00000214706.12	ENST00000417626.8	1943	12	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	33.6599425955718	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGGTATTTTTCTGTT	-50286849	True	NA	-1	True	ATTAAA	-29	NA	50292429	50287731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_66443.nic	chr3	-	2078	11	NIC	ENSG00000214706.12	novel	2275	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	753	junction_10	30.5980391528608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTAACCCCTGGGT	-50291341	False	NA	-12	True	ATTAAA	-18	NA	50292438	50287742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_66453.known	chr3	-	959	4	FSM	ENSG00000186792.17	ENST00000415204.5	959	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	14.0079342596338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGCCTACACCTCA	-50298304	True	NA	NA	False	NA	NA	NA	50299401	50292980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50293631_50293722_50294708_50294854_50299212
transcript_66454.known	chr3	-	1696	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	15.3260852434302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	-50298733	False	NA	-4	True	CATAAA	-18	NA	50298831	50292831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
transcript_66455.known	chr3	-	1878	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.65383665716478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	-50298308	True	NA	-4	True	CATAAA	-18	NA	50299405	50292831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
transcript_66456.known	chr3	-	1635	3	FSM	ENSG00000186792.17	ENST00000359051.7	1635	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGTTTGGCTGTTGCTC	-50298761	False	1097	-3	True	CATAAA	-19	NA	50298859	50292830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50294708_50295620_50298820
transcript_66457.known	chr3	-	1402	3	FSM	ENSG00000186792.17	ENST00000450982.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	-50299134	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50294708_50295620_50299212
transcript_66458.nic	chr3	-	1773	3	NIC	ENSG00000243477.6	novel	583	3	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50299339	False	NA	-4	True	AATAAA	-15	NA	50299437	50296401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50297673_50297806_50298084_50299212
transcript_66460.known	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298319	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50297528_50299212
transcript_66461.known	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298308	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50297673_50299212
transcript_66462.known	chr3	-	666	4	FSM	ENSG00000114378.17	ENST00000447605.2	666	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACACACTGAGTTGCA	-50303475	True	NA	NA	False	NA	NA	NA	50303573	50300481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50300801_50300987_50301078_50302056_50302206_50303465
transcript_66463.known	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-50303476	True	NA	-22	True	AATAAA	-15	NA	50303574	50299892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
transcript_66464.nic	chr3	-	2086	4	NIC	ENSG00000068001.14	novel	2318	5	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	308.920701799022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCTGCTTGGATTTT	-50310154	False	3732	-28	True	ATTAAA	-12	NA	50321182	50317811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50318540_50318955_50319046_50319568_50320536_50320881
transcript_66465.known	chr3	-	2136	4	FSM	ENSG00000068001.14	ENST00000395139.7	2136	4	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_3	94.9116548281728	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCTTGGATTTTGTA	-50310685	False	NA	-25	True	ATTAAA	-15	NA	50321713	50317808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365
transcript_66466.known	chr3	-	1882	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	261.892259441847	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGGATTTTGTAC	-50311717	False	11028	-24	True	ATTAAA	-16	NA	50322745	50317807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
transcript_66467.known	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_2	12	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-50317195	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50326187_50326356_50326478_50327953
transcript_66468.known	chr3	-	1757	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	15.039531242695	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAATCTTTTATACAT	-50336265	True	NA	-6	True	AATAAA	-20	NA	50337464	50329781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_66469.nic	chr3	-	1705	5	ISM	ENSG00000068028.18	ENST00000395126.7	1657	6	83	0	83	0	intron_retention	FALSE	canonical	2	8	junction_4	47.1937495861475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-50338099	False	NA	-12	True	AATAAA	-14	NA	50338150	50329787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904
transcript_6647.known	chr1	+	2578	19	FSM	ENSG00000131778.20	ENST00000652346.1	2578	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.813167930099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232578	True	NA	4	True	AATAAA	-6	NA	147242696	147295753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66471.known	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	50337500	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50337500_50338300
transcript_66473.known	chr3	-	1542	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_8	20.8863591848843	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCTGATGCGGTGACTC	-50348001	False	2774	NA	False	AATAAA	-44	NA	50350775	50347329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
transcript_66475.nnic	chr3	-	1307	10	NIC	ENSG00000114388.14	novel	1643	10	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	74.294376106053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATTGAGTGCTGTT	-50348078	False	NA	-4	True	AATAAA	-17	NA	50350852	50347490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349912_50350023_50350574
transcript_66479.nnic	chr3	+	650	3	Antisense	novelGene_ENSG00000007402.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCCATTGTTTATGT	50374382	False	NA	NA	False	AATAAA	-17	NA	50374407	50377166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_+_50374557_50376501_50376657_50376820
transcript_66481.known	chr3	+	1142	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350097	True	NA	12	True	AGTAAA	-15	NA	50350861	50354069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
transcript_66482.known	chr3	+	1225	4	FSM	ENSG00000114395.11	ENST00000232508.9	1225	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350080	True	NA	12	True	AGTAAA	-15	NA	50350844	50354069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50350985_50351342_50351561_50352008_50352047_50353240
transcript_66486.nic	chr3	+	1139	3	NIC	ENSG00000114395.11	novel	1142	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350062	True	NA	12	True	AGTAAA	-15	NA	50350826	50354069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_50350985_50351408_50351561_50353240
transcript_66488.known	chr3	+	1004	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50365250	True	NA	8	True	AATAAA	-18	NA	50365373	50368197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50365941_50366296_50366332_50367795
transcript_66489.known	chr3	+	590	3	FSM	ENSG00000271858.5	ENST00000606259.5	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCTGCGTGATGCCC	50365210	True	NA	NA	False	NA	NA	NA	50365333	50367845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50365839_50366296_50366332_50367795
transcript_66490.known	chr3	+	841	2	FSM	ENSG00000114395.11	ENST00000419046.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGAGCAGCTTGGCAA	50350108	True	NA	NA	False	NA	NA	NA	50350872	50353393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50351561_50353240
transcript_66491.known	chr3	+	511	2	FSM	ENSG00000271858.5	ENST00000607088.5	511	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50366197	False	NA	8	True	AATAAA	-18	NA	50366222	50368197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50366332_50367795
transcript_66492.known	chr3	-	2107	2	FSM	ENSG00000126062.4	ENST00000266025.4	2107	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTCTTGTCAGGC	-50356747	True	NA	-21	True	AATAAA	-20	NA	50359521	50354749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50355548_50358212
transcript_66493.known	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	50350093	True	NA	-25	True	NA	NA	NA	50350857	50354032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50351561_50352008_50352047_50353240
transcript_66494.known	chr3	+	910	3	FSM	ENSG00000271858.5	ENST00000606665.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50365261	False	NA	8	True	AATAAA	-18	NA	50365384	50368197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50365858_50366296_50366332_50367795
transcript_66496.known	chr3	+	16993	11	FSM	ENSG00000114735.10	ENST00000232854.9	16993	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.2079521501253	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGCATTCCCATTTT	50568999	True	NA	NA	False	AATAAA	-13	NA	50569521	50596166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_665.known	chr1	-	613	5	FSM	ENSG00000007923.17	ENST00000485073.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_1	84.7861279927324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTATGAAAGGATGC	-6679098	True	NA	NA	False	NA	NA	NA	6701804	6653808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_66500.known	chr3	-	788	4	FSM	ENSG00000088543.15	ENST00000486175.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	16.739839372653	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGAGGTTTCCCTCTGTT	-50567608	False	NA	NA	False	NA	NA	NA	50567621	50559282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50567462
transcript_66501.known	chr3	+	1499	11	FSM	ENSG00000114735.10	ENST00000455834.5	1499	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	18.2964477426631	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	50568970	True	NA	NA	False	AGTAAA	-16	NA	50569492	50580672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50569546_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_66503.known	chr3	+	2500	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	42.8154177837844	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	50610944	True	NA	13	True	AATAAA	-16	NA	50617169	50649288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_66505.known	chr3	+	2537	11	FSM	ENSG00000114738.11	ENST00000621469.5	2537	11	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_1	77.7818102129283	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCTGGGTTTACT	50610925	True	NA	16	True	AATAAA	-19	NA	50617150	50649291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50617242_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_6651.known	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	157.418977175562	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	147232565	True	NA	16	True	AATAAA	-18	NA	147242683	147295765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66510.known	chr3	-	2019	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCCTCAATGGGGCCG	-50611554	True	NA	-35	True	AATAAA	-18	NA	50611774	50606488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50608143_50608372_50608594_50611630
transcript_66512.known	chr3	+	909	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	40.3016404408335	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTGCTTTCCAGTT	51376003	True	NA	70	True	NA	NA	NA	51385290	51389397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
transcript_66514.known	chr3	+	1488	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	73.6059780180931	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66515.known	chr3	+	1448	6	FSM	ENSG00000164081.13	ENST00000457573.5	1448	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	72.6377312421031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51672340_51672393_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66518.known	chr3	+	1320	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	46.3815696155272	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	51669530	True	NA	11	True	AATAAA	-28	NA	51671251	51704323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66520.known	chr3	+	1313	5	FSM	ENSG00000164081.13	ENST00000416589.5	1313	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	67.788273322161	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	51669574	True	NA	5	True	AATAAA	-22	NA	51671295	51704317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671332_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66522.known	chr3	+	2290	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	64.8628360465375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	51669533	True	NA	-29	True	NA	NA	NA	51671254	51704283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66524.known	chr3	+	800	4	FSM	ENSG00000164081.13	ENST00000489026.5	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	69.0619689522067	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCACCCTCCTGC	51669453	True	NA	NA	False	NA	NA	NA	51671174	51704018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51684412_51684635_51699405_51699575_51703723
transcript_66525.known	chr3	+	1174	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	69.6770327216142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
transcript_66531.known	chr3	-	1542	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_14	24.7146985927527	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934951	True	NA	-6	True	ATTAAA	-18	NA	51941904	51933428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_66532.nnic	chr3	-	1587	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	115.946086169216	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934980	True	NA	-6	True	ATTAAA	-18	NA	51941933	51933428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941508_51941780
transcript_66533.nnic	chr3	-	1606	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	117.378421686233	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934988	True	NA	-6	True	ATTAAA	-18	NA	51941941	51933428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936583_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_6656.known	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	201.568887799992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	147232535	True	NA	-19	True	NA	NA	NA	147242653	147295730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66562.known	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.5500813108675	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51981564	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_66568.known	chr3	+	1457	14	FSM	ENSG00000243989.9	ENST00000636880.1	1457	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	95.9915553485037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983263	False	NA	38	True	AATAAA	-38	NA	51983434	51989197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_66569.known	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	94.9762349595971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983271	False	NA	38	True	AATAAA	-38	NA	51983442	51989197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_66570.known	chr3	-	2156	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	49.6473957557236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-51966479	False	975	-14	True	AATAAA	-16	NA	51967454	51957457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
transcript_66571.known	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	98.4954525177009	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983271	False	NA	38	True	AATAAA	-38	NA	51983442	51989197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_66580.known	chr3	+	1066	5	FSM	ENSG00000248487.10	ENST00000273596.8	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	5.78791845139511	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGTTCCGTTTCCTG	51974600	True	NA	10	True	AATAAA	-26	NA	51975063	51981196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835
transcript_66582.known	chr3	-	980	5	FSM	ENSG00000114779.20	ENST00000525795.1	980	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.2317340754157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTCTTTCTCTTGCAG	-51973074	True	NA	NA	False	NA	NA	NA	51974049	51969272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51971811_51971893_51973964
transcript_66583.known	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.78888096369861	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-51973074	True	NA	-4	True	AATAAA	-15	NA	51974049	51968514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
transcript_66584.known	chr3	-	1818	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	18.624953392932	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGCAATTAGACCCCA	-51973056	True	NA	-19	True	NA	NA	NA	51974031	51968529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
transcript_66585.known	chr3	+	781	2	FSM	ENSG00000243989.9	ENST00000496679.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTGGCAGATTGCT	51983168	False	NA	NA	False	NA	NA	NA	51983339	51984577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046
transcript_66587.known	chr3	-	910	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_3	3844.51265514311	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCCCTGAAGTGCAAG	-51844032	True	NA	76	True	NA	NA	NA	51995857	51993521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
transcript_66588.known	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	3787.56104461257	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	-51844019	True	NA	-31	True	AATAAA	-12	NA	51995844	51993628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
transcript_66589.known	chr3	-	537	4	FSM	ENSG00000162244.12	ENST00000492277.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3861.92813098443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTGCCAACATGAG	-51843989	False	NA	NA	False	NA	NA	NA	51995814	51993749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995764
transcript_66590.known	chr3	-	670	4	FSM	ENSG00000162244.12	ENST00000479017.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	3863.34020706895	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	-51844005	False	NA	-31	True	AATAAA	-12	NA	51995830	51993628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995768
transcript_66591.known	chr3	-	551	4	FSM	ENSG00000162244.12	ENST00000475248.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	2	93	junction_3	3825.21470711848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGTGCGACCCCCCAC	-51843990	False	NA	-125	True	NA	NA	NA	51995815	51993722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995778
transcript_66592.known	chr3	-	719	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3296.45464855805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	-51844056	True	NA	-30	True	AATAAA	-13	NA	51995881	51993627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
transcript_66597.known	chr3	-	1936	11	FSM	ENSG00000164087.8	ENST00000296484.7	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	36.6	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-52152562	True	NA	8	True	ATTAAA	-43	NA	52154423	52075225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_66598.known	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	65.158575797818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	-52152543	True	NA	NA	False	NA	NA	NA	52154404	52075453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_66602.nnic	chr3	-	1855	10	NIC	ENSG00000164087.8	novel	1936	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	64.3959587720599	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-52154214	False	NA	8	True	ATTAAA	-43	NA	52154441	52075225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_52075986_52096568_52096713_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_66605.known	chr3	-	1999	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	45.8728785629845	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	-52154463	False	NA	-52	True	NA	NA	NA	52154690	52075285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_6661.nic	chr1	+	1514	10	NIC	ENSG00000131778.20	novel	2818	21	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	7	junction_1	291.171961409596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232560	True	NA	13	True	AATAAA	-15	NA	147242678	147295762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_147242831_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66611.nnic	chr3	-	1684	9	NIC	ENSG00000164087.8	novel	1999	10	NA	NA	-18	-27	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	70.7031647099336	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGCAGGAGTGGCTTA	-52154214	False	NA	-19	True	ATTAAA	-16	NA	52154441	52075252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_52075986_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_66617.known	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	100.185695354771	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	52196164	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_66618.known	chr3	+	2430	12	FSM	ENSG00000023330.15	ENST00000394965.6	2430	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	114.525178580632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	52196098	True	NA	33	True	AATAAA	-18	NA	52198093	52214327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52198671_52198849_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_66622.known	chr3	+	2125	11	FSM	ENSG00000023330.15	ENST00000469224.5	2125	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	46.4182076345048	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGACCTCAATTATTTCA	52196090	True	NA	NA	False	NA	NA	NA	52198085	52214180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_66626.known	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6280697340678	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	52196136	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_66627.nic	chr3	+	2110	10	NIC	ENSG00000023330.15	novel	2212	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	108.816302337108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	NA	False	NA	30	True	AATAAA	-15	NA	52198079	52214324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52198256_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52211282_52211552_52212257_52212421_52214019
transcript_6663.known	chr1	-	2331	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.33307290649335	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	-147225214	True	NA	2	True	AATAAA	-15	NA	147225339	147186260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
transcript_66630.known	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	152.787434038274	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-52234980	True	NA	6	True	NA	NA	NA	52239149	52228632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
transcript_66633.known	chr3	+	1101	2	FSM	ENSG00000243224.1	ENST00000483834.1	1101	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGTGTTGTATACT	52239020	True	NA	NA	False	AATGAA	-7	NA	52239257	52241097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52239436_52240174
transcript_66635.known	chr3	-	1558	9	FSM	ENSG00000247596.10	ENST00000678549.1	1558	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	155.092663833593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-52234980	True	NA	6	True	NA	NA	NA	52239149	52228632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232097_52235028_52235107_52238991
transcript_66636.known	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	14.5882256128226	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-52231021	False	4169	-21	True	AATAAA	-16	NA	52235190	52228611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
transcript_66637.known	chr3	-	4286	9	FSM	ENSG00000164091.12	ENST00000296490.8	4286	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	12.507497751349	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGCTGCAGCCTCTT	-52273991	True	NA	-22	True	TATAAA	-32	NA	52278649	52254433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52270711_52270810_52278200
transcript_66638.nic	chr3	+	1406	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	6.51707159867238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	52287123	True	NA	16	True	AATAAA	-18	NA	52287822	52293475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293175_52293306
transcript_66639.nic	chr3	+	1420	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	5.4594464513864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287123	True	NA	12	True	AATAAA	-14	NA	52287822	52293471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_66644.known	chr3	+	992	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	5.2687759489278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287135	True	NA	12	True	AATAAA	-14	NA	52287834	52293471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_66646.known	chr3	+	3791	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6.17960354715414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTCCCTTGCTCTTG	52287128	True	NA	12	True	CATAAA	-22	NA	52287827	52295257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
transcript_66648.known	chr3	+	935	5	FSM	ENSG00000168237.18	ENST00000473032.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.11247489949718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTCTCAGTGCGCCT	52287120	True	NA	10	True	AATAAA	-12	NA	52287819	52293469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52293045_52293193_52293306
transcript_66651.known	chr3	+	2019	5	FSM	ENSG00000168237.18	ENST00000486393.5	2019	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	8.06225774829855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	52287120	True	NA	16	True	AATAAA	-18	NA	52287819	52293475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291744_52291923_52292259
transcript_66652.known	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_9	72.9777095677166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	-52409894	False	NA	-2	True	AATAAA	-8	NA	52409914	52401025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_66653.known	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_9	39.4966375151101	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-52406407	True	NA	16	True	AATAAA	-26	NA	52410008	52401007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_66655.known	chr3	+	576	5	FSM	ENSG00000010318.22	ENST00000482327.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	9.90896059130321	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	52409643	False	NA	NA	False	NA	NA	NA	52411035	52414836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_66656.known	chr3	-	687	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	4.84148737476408	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTATCTGGCTCTGG	-52453705	True	NA	-3	True	AATAAA	-15	NA	52454041	52451099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
transcript_66660.known	chr3	-	2047	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	552.386623886315	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-52534963	True	NA	-23	True	AATAAA	-17	NA	52535054	52524386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
transcript_66661.known	chr3	+	314	3	FSM	ENSG00000168273.8	ENST00000491607.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	52533793	True	NA	22	True	AATAAA	-18	NA	52534012	52540526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52534149_52534802_52534878_52540423
transcript_66662.known	chr3	+	1769	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	52531369	True	NA	4	True	AATAAA	-13	NA	52536604	52541890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52536907_52540423
transcript_66663.known	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	52531366	True	NA	21	True	AATAAA	-17	NA	52536601	52540525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52536774_52540423
transcript_66667.known	chr3	-	6053	16	FSM	ENSG00000114904.13	ENST00000233027.10	6053	16	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_9	26.6699997916927	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTACTCTTCTATGT	-52769238	True	NA	0	True	AATAAA	-20	NA	52770940	52708443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
transcript_66676.known	chr3	+	1933	15	FSM	ENSG00000163938.17	ENST00000418458.6	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_7	161.179912786036	2072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTTTATTTACAGAT	52665075	True	NA	3	True	AATAAA	-24	NA	52686031	52694497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_6668.known	chr1	+	662	6	FSM	ENSG00000131778.20	ENST00000492728.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_5	23.4571950582332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACATGTACAGCTGTCC	147232627	True	NA	NA	False	NA	NA	NA	147242745	147260046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836
transcript_66686.known	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	373.901329339216	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	52665059	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_66697.known	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	154.638345023087	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	52665092	True	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_667.known	chr1	-	581	5	FSM	ENSG00000007923.17	ENST00000460594.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	422.133865023881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGCATTGTCTTTCA	-6679117	True	NA	NA	False	ATTAAA	-16	NA	6701823	6654107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6654288_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_6671.known	chr1	+	1571	2	FSM	ENSG00000180867.11	ENST00000440377.2	1571	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCATACTAATTCCC	147172281	True	NA	NA	False	TATAAA	-19	NA	147172770	147175205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147173560_147174423
transcript_66724.known	chr3	-	1826	11	FSM	ENSG00000016864.19	ENST00000478968.6	1826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	83.2334668267519	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-52702692	True	NA	-10	True	AATAAA	-17	NA	52705791	52694488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705702
transcript_66725.known	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	51.667741924295	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-52702692	True	NA	-7	True	AATAAA	-20	NA	52705791	52694485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_66726.known	chr3	-	1577	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	82.6599459633665	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTTCAATAGGTAT	-52702682	True	NA	-24	True	AATAAA	-3	NA	52705781	52694502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
transcript_66728.known	chr3	+	597	4	FSM	ENSG00000163938.17	ENST00000462550.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	3	1388	junction_2	32.6224190124249	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCAAGGCTGGTCTCA	52665075	True	NA	NA	False	NA	NA	NA	52686031	52687827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501
transcript_66729.known	chr3	+	3786	4	FSM	ENSG00000114902.14	ENST00000619898.5	3786	4	0	0	0	0	multi-exon	FALSE	canonical	3	1536	junction_2	86.259299015623	983	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAGTTTTAATTTG	52682281	True	NA	NA	False	AAAACA	-20	NA	52706105	52711148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52706283_52706643_52706704_52706792_52706880_52707686
transcript_6673.known	chr1	+	2862	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	182.968678781277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232558	True	NA	-25	True	AATATA	-40	NA	147242676	147295724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66734.known	chr3	-	4744	8	FSM	ENSG00000213533.13	ENST00000355083.11	4744	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	26.10340504804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	-52893071	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
transcript_66736.known	chr3	-	514	3	FSM	ENSG00000213533.13	ENST00000485356.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	99.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGAGGTTGTTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	52852699	52847256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52847552_52849791_52849914_52852602
transcript_6674.known	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.278971370493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232562	True	NA	4	True	AATAAA	-6	NA	147242680	147295753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66740.known	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	35.5132017706092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	-53127948	True	NA	4	True	AATAAA	-25	NA	53130435	53088482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_66746.known	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	96.5249079317855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-53127966	True	NA	-22	True	TTTAAA	-13	NA	53130453	53091664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
transcript_6675.known	chr1	+	2937	23	FSM	ENSG00000131778.20	ENST00000622533.4	2937	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	156.40440800366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232565	True	NA	11	True	AATAAA	-13	NA	147242683	147295760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254897_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264589_147265935_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_66750.nnic	chr3	-	1696	11	NIC	ENSG00000163933.10	novel	1800	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	96.9344623959921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-53127948	True	NA	-22	True	TTTAAA	-13	NA	53130435	53091664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53130337
transcript_66751.nnic	chr3	-	1241	11	NNC	ENSG00000163933.10	novel	886	9	NA	NA	-14	378	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	102.970918224516	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACAAGTTCACTAGCAT	-53127980	True	NA	NA	False	TATAAA	-19	NA	53130467	53103194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_53103267_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_66753.nnic	chr3	-	377	2	NNC	ENSG00000163933.10	novel	5081	13	NA	NA	-14	-25714	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCGGCTCTTAGTATGC	-53127980	True	NA	-3	True	AATAAA	-14	NA	53130467	53129755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_53130003_53130337
transcript_66755.known	chr3	-	2831	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1240.54997061458	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGCAATTGCCCCC	-53153063	True	NA	-21	True	AATAAA	-13	NA	53256000	53224713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_66756.known	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	1314.32275628641	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_66757.known	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	1666.39069364827	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_6676.nnic	chr1	-	3027	10	NIC	ENSG00000162836.12	novel	4564	8	NA	NA	0	-6	intron_retention	FALSE	canonical	3	28	junction_1	41.0684463298847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATTCCATGACTTTTC	-147669277	True	NA	-9	True	ATTAAA	-15	NA	147670524	147629657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_147631066_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_66760.known	chr3	-	5926	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_2	16.7729941672122	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTAATTGTGTTTT	-53344772	True	NA	NA	False	AATAAA	-27	NA	53347543	53283428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_66764.known	chr3	-	1853	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	67.353428828828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53344754	True	NA	NA	False	NA	NA	NA	53347525	53287369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_66770.known	chr3	+	2016	11	FSM	ENSG00000056736.10	ENST00000288167.8	2016	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.40462764674866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGGACCAAATGAT	53845918	True	NA	NA	False	AATAAA	-14	NA	53846567	53865794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_66772.known	chr3	+	1048	10	FSM	ENSG00000056736.10	ENST00000494338.1	1048	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	9.41760893351871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGTGGCAGAAAAA	53845935	False	NA	NA	False	NA	NA	NA	53846584	53864891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_6678.known	chr1	-	6956	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	19.3620476419435	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTTGGCACCCAGG	-147669277	True	NA	NA	False	AATAAA	-23	NA	147670524	147642229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_66780.known	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	12.4730264526653	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-53877224	True	NA	NA	False	ATTAAA	-1	NA	53882152	53867065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_6679.nic	chr1	-	1773	10	NIC	ENSG00000162836.12	novel	6956	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_3	55.4084719644216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	-147669277	True	NA	-3	True	AATAAA	-17	NA	147670524	147647367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_147647567_147648245_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_66795.known	chr3	-	814	6	NNC	ENSG00000113811.12	novel	1497	5	NA	NA	-77	101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	530.64617213356	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTGTCACCTTTTC	NA	False	NA	-28	True	AATAAA	-17	NA	53891962	53885199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_53885562_53885825_53885831_53885833_53885913_53886850_53886935_53888392_53888484_53891769
transcript_66798.known	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	562.606601009977	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	-53887043	True	NA	-30	True	ATTAAA	-13	NA	53891865	53885300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
transcript_668.nic	chr1	-	1753	4	FSM	ENSG00000007923.17	ENST00000693337.1	1512	4	-33	-208	-32	208	multi-exon	FALSE	canonical	3	880	junction_1	63.1259763400843	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAGAAAAAAA	-6679149	True	NA	NA	False	NA	NA	NA	6701855	6666388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6667811_6678393_6678468_6680907_6681038_6701728
transcript_66805.nnic	chr3	+	940	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-352676	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.60442225659	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54634912	True	NA	11	True	AATAAA	-14	NA	54635001	54879187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54635115_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_66806.nnic	chr3	+	908	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349931	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.7683499399089	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54637617	True	NA	11	True	AATAAA	-14	NA	54637746	54879187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_66807.nnic	chr3	+	1076	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349834	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.458771765402	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54637714	False	NA	11	True	AATAAA	-14	NA	54637843	54879187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54638093_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_66809.nnic	chr3	+	861	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345819	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.6951590185303	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54641175	True	NA	11	True	AATAAA	-14	NA	54641858	54879187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_66817.nnic	chr3	+	3002	4	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349931	-118641	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	25.0199920063936	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGCAAAAACAAGAAA	54637617	True	NA	NA	False	AAAAAG	-41	NA	54637746	54766945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217
transcript_6683.known	chr1	-	891	2	FSM	ENSG00000265107.3	ENST00000430508.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTGGGCATAGTCC	-147773335	False	NA	NA	False	NA	NA	NA	147773354	147758483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147759272_147773251
transcript_66868.nnic	chr3	-	1243	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-177	-2	at_least_one_novel_splicesite	FALSE	canonical	3	353	junction_3	3177.0071903444	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640034	54632123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637673_54637821_54639604
transcript_66869.nnic	chr3	-	1374	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-179	-2	at_least_one_novel_splicesite	FALSE	canonical	3	353	junction_3	3181.97835473468	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640036	54632123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637673_54637950_54639604
transcript_66875.nnic	chr3	-	1226	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-177	-2	at_least_one_novel_splicesite	FALSE	canonical	3	507	junction_4	2745.45391283482	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640034	54632123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637821_54639604
transcript_66876.nnic	chr3	-	1357	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-179	-2	at_least_one_novel_splicesite	FALSE	canonical	3	486	junction_4	2754.17546645089	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640036	54632123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637950_54639604
transcript_66877.nnic	chr3	-	1313	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-120	-2	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_4	2927.82900585058	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54639977	54632123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637965_54639604
transcript_669.known	chr1	-	745	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	452.607998161765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTAATATCTTATTTAT	-6679113	True	NA	NA	False	AATAAA	-16	NA	6701819	6670460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
transcript_66910.nnic	chr3	-	1415	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-189	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_3	3256.49467304271	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54640046	54632121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54639604
transcript_66914.nnic	chr3	-	1108	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-189	-2	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_3	3044.87595076639	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640046	54632123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
transcript_6694.known	chr1	+	1954	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	63.4356590588975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926088	True	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_66949.known	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	2827.76900675348	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
transcript_66950.nic	chr3	-	1234	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	-56466656	True	NA	-13	True	AATAAA	-13	NA	56468423	56433788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_56434050_56434350_56435148_56468247
transcript_66959.known	chr3	+	3134	18	FSM	ENSG00000180376.17	ENST00000394672.8	3134	18	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	22.8392911009313	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTTCTTCTGCTCTGTCA	56552384	True	NA	37	True	AGTAAA	-17	NA	56557174	56621837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_6696.known	chr1	+	2633	14	FSM	ENSG00000188092.15	ENST00000478307.5	2633	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	68.1588815642883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCAGTTATGTCATT	147926088	True	NA	9	True	AATAGA	-14	NA	147928392	147993521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968357_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_6697.known	chr1	+	2160	14	FSM	ENSG00000188092.15	ENST00000314163.12	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	36.5584560677714	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTTCCTTTTTTTTT	147926115	True	NA	80	True	NA	NA	NA	147928419	147993592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_66980.known	chr3	+	2188	7	FSM	ENSG00000180376.17	ENST00000442522.6	2188	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	47.7144282860716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGGAGATTGCAGT	56552437	True	NA	NA	False	NA	NA	NA	56557227	56570671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312
transcript_66981.known	chr3	+	1983	13	FSM	ENSG00000180376.17	ENST00000422222.5	1983	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	43.4824357898936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGTGTAATCAGTTCA	56552370	True	NA	NA	False	GATAAA	-36	NA	56557160	56617301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111
transcript_66986.known	chr3	-	5600	24	FSM	ENSG00000163946.14	ENST00000493960.6	5600	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	16.7214474640506	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGCAAAGGCTTTACT	-56682980	False	670	NA	False	NA	NA	NA	56683017	56622737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
transcript_66987.known	chr3	+	3027	18	FSM	ENSG00000180376.17	ENST00000326595.11	3027	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	35.2034128575144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTACTTGTTCTATACA	56552397	True	NA	-38	True	ATTAAA	-24	NA	56557187	56621762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557235_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_66989.known	chr3	-	3582	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	6.32065006814573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-56801808	True	NA	-6	True	AATAAA	-17	NA	56801949	56727419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_6699.nic	chr1	+	1847	13	NIC	ENSG00000188092.15	novel	2160	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	61.6591774731602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926115	True	NA	NA	False	ATTAAA	-15	NA	147928419	147993339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_147928579_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_66990.known	chr3	-	2024	9	FSM	ENSG00000163947.12	ENST00000495373.5	2024	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	6.59426834455499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-56801808	True	NA	0	True	GATAAA	-43	NA	56801949	56731592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_66991.nic	chr3	-	732	3	ISM	ENSG00000163947.12	ENST00000338458.8	3639	13	5	230907	5	-184558	5prime_fragment	FALSE	canonical	2	12	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCAAGTGGCCCAGT	-57078874	True	NA	NA	False	ATTAAA	-15	NA	57079303	56958324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_56958890_57035087_57035177_57079225
transcript_66993.known	chr3	+	2190	2	FSM	ENSG00000186451.2	ENST00000334325.2	2190	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGCTAAGACATGTGT	57060624	True	NA	NA	False	AATAAA	-15	NA	57060663	57075432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57060787_57073365
transcript_670.nnic	chr1	-	483	4	NNC	ENSG00000007923.17	novel	1357	8	NA	NA	-32	-1716	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	449.779946195915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTGTTGAATAGAACAC	-6679149	True	NA	2	True	ATTAAA	-22	NA	6701855	6672176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_6672329_6678393_6678468_6680907_6681038_6701728
transcript_67006.known	chr3	-	757	3	FSM	ENSG00000163666.10	ENST00000473921.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	50	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCATGACTAAGTGAT	-57199399	True	NA	NA	False	AATAAA	-19	NA	57199938	57197915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57198296_57198752_57198953_57199761
transcript_67007.known	chr3	+	6069	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	24.1588657360149	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	57222697	True	NA	31	True	AATAAA	-35	NA	57227728	57273471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
transcript_67009.nic	chr3	+	548	7	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	-1	25129	-1	0	5prime_fragment	FALSE	canonical	3	236	junction_2	13.8283123417944	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	57222756	True	NA	7	True	AATAGA	-15	NA	57227787	57242892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_67010.known	chr3	+	8780	3	FSM	ENSG00000174840.9	ENST00000311180.9	8780	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	5.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGCCTTTTCAGGACC	57553237	True	NA	NA	False	AATAAA	-19	NA	57556273	57566848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57557688_57559309_57559389_57559561
transcript_67015.known	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1709	junction_2	87.9477117382823	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	-57579694	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
transcript_67017.known	chr3	-	1601	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	727.466012951808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTGGAATTATTCCT	-57579716	True	NA	NA	False	AATACA	-12	NA	57597366	57571404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
transcript_67022.known	chr3	-	1360	4	FSM	ENSG00000168374.11	ENST00000489843.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	849.88639763729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAATTATTCCTAATAAAA	-57579684	True	NA	NA	False	AATACA	-19	NA	57597334	57571397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57597073
transcript_67024.known	chr3	+	437	2	FSM	ENSG00000272146.6	ENST00000607297.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGAGAATCTTTCTT	57597690	True	NA	NA	False	AATAAA	-33	NA	57597788	57600916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57598052_57600742
transcript_67025.known	chr3	+	552	3	FSM	ENSG00000272146.6	ENST00000607782.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTCTTATTTTTAAAAA	57597697	True	NA	NA	False	AATAAA	-44	NA	57597795	57600927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57598052_57600058_57600170_57600742
transcript_67026.nic	chr3	+	2470	6	ISM	ENSG00000163681.16	ENST00000662629.1	3210	12	22556	0	309	0	3prime_fragment	FALSE	canonical	3	132	junction_5	35.0279888089511	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTACTCTCCCTACGCA	57912592	False	NA	2	True	AATAAA	-3	NA	57912603	57929152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
transcript_67028.known	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	21.1122806693575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237438	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_67029.known	chr3	+	2393	9	FSM	ENSG00000163686.15	ENST00000295962.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	14.9242880902239	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237400	True	NA	12	True	AATAAA	-23	NA	58237531	58294734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_67040.known	chr3	+	3266	6	FSM	ENSG00000163684.12	ENST00000295959.10	3266	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	62.4480584165753	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	58304686	True	NA	8	True	NA	NA	NA	58306244	58320193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67044.known	chr3	+	805	6	FSM	ENSG00000163684.12	ENST00000466547.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	98.2710537238713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAGAATTAACAGGGGA	58304751	False	NA	NA	False	NA	NA	NA	58306309	58317778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310289_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67047.known	chr3	+	7985	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	80.7053901545615	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAAACACTGAGTT	58304703	True	NA	NA	False	AATAAA	-26	NA	58306261	58324695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_6705.known	chr1	-	164	1	FSM	ENSG00000206585.1	ENST00000383858.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	-148038835	True	NA	NA	False	NA	NA	NA	148038916	148038752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_148038800_148038900
transcript_67054.known	chr3	+	1378	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	86.4363927984041	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	58304755	False	NA	NA	False	NA	NA	NA	58306313	58318472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67057.known	chr3	+	3127	5	FSM	ENSG00000255154.9	ENST00000461393.7	3127	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	93.7879923017867	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	58305568	True	NA	8	True	NA	NA	NA	58306519	58320193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306652_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67060.known	chr3	+	648	4	FSM	ENSG00000255154.9	ENST00000475412.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.089781228694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTCAGAATTAACAGG	58304703	True	NA	NA	False	NA	NA	NA	58306261	58317775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58316514_58316592_58316914_58316994_58317439
transcript_67062.known	chr3	+	2031	18	FSM	ENSG00000168297.16	ENST00000484288.5	2031	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	22.2945056616863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAGTTACAGGGAGACA	58332374	True	NA	NA	False	NA	NA	NA	58332910	58420960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58420535
transcript_67063.known	chr3	+	3001	18	FSM	ENSG00000168297.16	ENST00000356151.7	3001	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	15.349898278576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTCTTATTCTTTTG	58332355	True	NA	118	True	AATAGA	-32	NA	58332891	58426127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_67064.known	chr3	+	1974	17	FSM	ENSG00000168297.16	ENST00000302779.9	1974	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	17.9564359979925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCTTAAGATCTTGCT	58332343	True	NA	NA	False	AATAAA	-14	NA	58332879	58425151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58424751
transcript_67069.known	chr3	-	1507	10	FSM	ENSG00000168291.13	ENST00000302746.11	1507	10	0	0	0	0	multi-exon	FALSE	canonical	3	2088	junction_9	100.871143813883	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	-58428250	True	NA	-2	True	AATAAA	-17	NA	58433832	58427629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_67073.known	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	713.850816105383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	-58428238	True	NA	18	True	ATTAAA	-42	NA	58433820	58427650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_67080.known	chr3	-	1478	9	FSM	ENSG00000168291.13	ENST00000383714.8	1478	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_8	759.612719992892	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	-58428275	True	NA	-2	True	AATAAA	-17	NA	58433857	58427629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433767
transcript_67095.known	chr3	-	1535	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_3	74.7544940120659	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAATATACATTTACT	-58428257	True	NA	-23	True	ATTAAA	-1	NA	58433839	58427691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
transcript_67096.known	chr3	+	1759	4	FSM	ENSG00000168301.13	ENST00000490264.1	1759	4	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_1	51.6999892542435	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACTAATAAAAAATGAA	58490617	True	NA	-15	True	NA	NA	NA	58492118	58502327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58492170_58494152_58494409_58498712_58498783_58500945
transcript_67098.known	chr3	+	1555	3	FSM	ENSG00000168301.13	ENST00000404589.8	1555	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	15.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	58490594	True	NA	14	True	AATAAA	-17	NA	58492095	58502356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58492170_58498712_58498783_58500945
transcript_67100.known	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.2687759489278	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	-58526667	False	NA	-5	True	ATTAAA	-14	NA	58526749	58505135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
transcript_67101.known	chr3	-	2994	4	FSM	ENSG00000168309.18	ENST00000360997.7	2994	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTTGGTCAGTCTCTG	-58577339	False	NA	-2	True	AATAAA	-22	NA	58577391	58564116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58577308
transcript_67102.known	chr3	-	1432	4	FSM	ENSG00000168309.18	ENST00000447756.2	1432	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGCTTCTAACTCAAT	-58587061	True	NA	NA	False	CATAAA	-20	NA	58587113	58565851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58586857
transcript_67106.nic	chr3	-	1212	6	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-328	26156	-3	68	5prime_fragment	FALSE	canonical	3	39	junction_1	11.2178429299041	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	-59049537	True	NA	NA	False	AAAAAG	-13	NA	59050087	58913501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_67107.nnic	chr3	-	1472	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6536	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	5.93717104351896	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	NA	False	NA	-6	True	AATAAA	-21	NA	58842690	58742005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842146
transcript_67108.nnic	chr3	-	1072	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6671	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	9.23309265630969	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842272	True	NA	-6	True	AATAAA	-21	NA	58842555	58742005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842411
transcript_67114.nic	chr3	-	1360	4	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-328	151585	-3	-85444	5prime_fragment	FALSE	canonical	3	42	junction_2	12.0277457017791	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTACATTTAAGGTATGC	-59049537	True	NA	NA	False	AATAAA	-20	NA	59050087	59038930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_59039630_59046228_59046323_59047164_59047255_59049610
transcript_67117.known	chr3	-	1033	10	FSM	ENSG00000189283.10	ENST00000476844.5	1033	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.0393516463828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTCGGTGTATTG	-61250654	True	NA	2	True	ATTAAA	-19	NA	61251413	59749309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_59749569_59752220_59752322_59922345_59922415_60011370_60011401_60014006_60014153_60536859_60536980_60821918_60822012_61042046_61042100_61200616_61200666_61251300
transcript_67118.known	chr3	-	3116	10	FSM	ENSG00000189283.10	ENST00000492590.6	3116	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	12.3738074621804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGAGTGTGTGGT	-61250693	True	NA	NA	False	ATTAAA	-21	NA	61251452	59747276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_59749580_59752220_59752322_59922345_59922415_60011370_60011401_60014006_60014153_60536859_60536980_60821918_60822012_61042046_61042100_61200616_61200666_61251300
transcript_67119.known	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	-61741834	False	NA	NA	False	NA	NA	NA	61743106	61742454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_61742500_61743100
transcript_6712.known	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	-148459545	False	NA	-1	True	AATAAA	-16	NA	148459757	148432958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_148433644_148435145_148435355_148459601
transcript_67132.nnic	chr3	-	328	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.8174071805952	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-62318033	True	NA	NA	False	AATAAA	-16	NA	62318937	62315808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318865
transcript_67134.nnic	chr3	-	334	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.9888847706114	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-62318036	True	NA	NA	False	AATAAA	-16	NA	62318940	62315808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_62315885_62317105_62317193_62317807_62317904_62318865
transcript_67136.nnic	chr3	-	372	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.41629792788369	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-62318036	True	NA	NA	False	AATAAA	-16	NA	62318940	62315808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_62315885_62317105_62317231_62317807_62317904_62318865
transcript_67137.known	chr3	+	3369	6	FSM	ENSG00000114405.11	ENST00000462069.6	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	31.2499599999744	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	62318108	True	NA	NA	False	ATTAAA	-16	NA	62319021	62336213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_67138.known	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	76.3098126062435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	62318101	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
transcript_67139.known	chr3	+	768	5	FSM	ENSG00000114405.11	ENST00000542214.2	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7.08872343937891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	62318807	False	NA	12	True	ATTAAA	-24	NA	62319720	62333646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_67144.nnic	chr3	+	2199	10	NNC	ENSG00000244342.5	novel	1957	9	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	20.5918598324198	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	62947954	True	NA	17	True	AATAAA	-17	NA	62950342	63125062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63102691_63102830_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
transcript_67157.nnic	chr3	+	1753	7	NIC	ENSG00000244342.5	novel	1957	9	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	23.279103648265	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	62947954	True	NA	17	True	AATAAA	-17	NA	62950342	63125062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63123322_63123449_63124082
transcript_67159.nnic	chr3	+	927	7	NNC	ENSG00000244342.5	novel	758	7	NA	NA	-87	23738	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	27.1830216618143	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTTTGGACATTCATT	62947954	True	NA	8	True	AATAAA	-41	NA	62950342	63148800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63144744_63144988_63146623_63146730_63148679
transcript_67164.nnic	chr3	+	807	6	NNC	ENSG00000244342.5	novel	550	6	NA	NA	-87	23738	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.4108261591446	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTTTGGACATTCATT	62947954	True	NA	8	True	AATAAA	-41	NA	62950342	63148800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63144744_63144988_63146623_63146730_63148679
transcript_6717.nnic	chr1	+	1089	4	NNC	ENSG00000231551.8	novel	1082	4	NA	NA	-30	-14	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_3	4.02768199119819	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGCCAATAGTATGG	NA	False	NA	NA	False	AATAAA	-15	NA	148402485	148425205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_148402666_148420371_148420608_148424062_148424157_148424626
transcript_67177.nnic	chr3	-	294	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95586	-43042	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	8.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCAGTCTAGTATTTTG	-63645126	True	NA	-3	True	AATAAA	-16	NA	63645637	63466637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_63466735_63549977_63550052_63645514
transcript_6718.known	chr1	+	165	1	FSM	ENSG00000274210.1	ENST00000622285.1	165	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTTTGTGGTGCGAATA	148519189	True	NA	NA	False	GGGGCT	-20	NA	148522600	148522765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_148522600_148522800
transcript_67182.known	chr3	-	892	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_7	78.2632918879781	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGTGCTCATTAATA	-63855961	True	NA	-2	True	AATAAA	-17	NA	63863805	63833869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
transcript_67185.known	chr3	-	836	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	203.694556191917	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTGTGCTCATTAAT	-63856024	True	NA	-3	True	AATAAA	-16	NA	63863868	63833870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
transcript_67186.known	chr3	-	1495	9	FSM	ENSG00000163636.11	ENST00000492933.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	516.8353068193	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-64010305	True	NA	-20	True	AATAAA	-18	NA	64023472	64010554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64022642_64022802_64023274
transcript_67192.known	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_7	107.470546510879	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-64010327	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
transcript_67193.known	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	438.807753917315	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	-64010291	True	NA	-49	True	NA	NA	NA	64023458	64010583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
transcript_67198.known	chr3	-	2052	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_5	51.1750807414008	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-64010270	True	NA	-20	True	AATAAA	-18	NA	64023437	64010554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
transcript_67199.nic	chr3	-	1573	5	ISM	ENSG00000151276.24	ENST00000460329.6	3694	22	-213	91717	-213	0	5prime_fragment	TRUE	canonical	0	0	junction_4	52.3133587145769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	-65597750	False	NA	NA	False	AATGAA	-13	NA	65598099	65452581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_672.known	chr1	+	2053	5	FSM	ENSG00000041988.16	ENST00000377627.7	2053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.2979036812158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATGTCTGGGTTTTTTC	6623780	True	NA	8	True	AATAAA	-5	NA	6625191	6635586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6625293_6628498_6628692_6630287_6630354_6632369_6632496_6634019
transcript_6720.known	chr1	-	1108	5	FSM	ENSG00000286019.1	ENST00000593495.3	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	24.9236333627343	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGACATTAACAGTGG	-148679091	True	NA	NA	False	AATAAA	-12	NA	148679779	148607039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_148607160_148607409_148607746_148615690_148615951_148640015_148640090_148679461
transcript_67200.known	chr3	-	2247	6	FSM	ENSG00000151276.24	ENST00000464060.5	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	38.5050646019455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	-66034371	True	NA	NA	False	AATGAA	-13	NA	66038834	65452581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_65453341_65470282_65470488_65478591_65478799_65493511_65493632_65621971_65622089_66037995
transcript_6721.known	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	28.8638371279704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-20	True	NA	NA	NA	148951936	148981746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_67214.nic	chr3	+	1142	10	NIC	ENSG00000144741.19	novel	1023	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	117.474767450948	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217965	True	NA	9	True	AATAAA	-18	NA	66220977	66378079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66304452_66304538_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_67218.known	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	67.0571895225759	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	66217988	True	NA	97	True	AATAAA	-18	NA	66221000	66378923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_67219.known	chr3	+	1023	9	FSM	ENSG00000144741.19	ENST00000336733.10	1023	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	46.2817458616245	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217999	True	NA	9	True	AATAAA	-18	NA	66221011	66378079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_6722.known	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	16.8076201096407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	148952329	False	NA	9	True	AATAAA	-22	NA	148952340	148986477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_67226.nnic	chr3	+	942	7	FSM	ENSG00000144741.19	ENST00000686445.1	1751	7	-14	823	-11	0	multi-exon	FALSE	canonical	3	20	junction_4	109.272976226208	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217965	True	NA	9	True	AATAAA	-18	NA	66220977	66378079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66369477_66369543_66370528_66370603_66377689
transcript_67232.known	chr3	+	4680	4	FSM	ENSG00000163376.11	ENST00000417314.2	4680	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.1455023315337	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGTTGCAAAGTGA	66997313	True	NA	8	True	AATAAA	-19	NA	66998306	67011210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66998372_66998980_66999192_67003194_67004310_67007921
transcript_67237.known	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_4	46.75991873389	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-67647623	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_6724.nnic	chr1	-	891	6	NNC	ENSG00000215861.7	novel	589	5	NA	NA	-57	7272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.26190128606002	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCTTGTCATTTCAA	NA	False	NA	NA	False	AATAAA	-22	NA	149240898	149190285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_149190532_149197995_149198172_149198360_149198485_149201013_149201091_149240376_149240488_149240741
transcript_67249.known	chr3	+	2063	2	FSM	ENSG00000241316.8	ENST00000671174.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATAAATAAATGTAAAT	67654037	True	NA	NA	False	AGTAAA	-45	NA	67654737	67748468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_67655103_67746770
transcript_6725.nnic	chr1	+	1593	5	Fusion	ENSG00000272755.1_ENSG00000274265.5	novel	1022	3	NA	NA	4	-7	multi-exon	FALSE	canonical	0	0	junction_2	10.9658560997307	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCCCTGTTTTGGTGA	149174962	True	NA	NA	False	AATAAA	-14	NA	149175901	149264809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_149176251_149177157_149177213_149259501_149259610_149262167_149262277_149263837
transcript_67250.known	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.5315601582564	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931959	True	NA	-5	True	AGTAAA	-23	NA	68932547	68731765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_67251.nic	chr3	-	2147	6	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	15.551205741035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931959	True	NA	-5	True	AGTAAA	-23	NA	68932547	68731765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932321
transcript_67253.nnic	chr3	-	2221	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	10.4192130221049	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931992	True	NA	-5	True	AGTAAA	-23	NA	68932580	68731765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_68733154_68739115_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_67258.nnic	chr3	-	2129	5	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	-12	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	13.5369863706809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGCATACATGTTTTTG	-68931992	True	NA	-13	True	AGTAAA	-15	NA	68932580	68731773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_68733154_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_6726.known	chr1	+	918	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	149174953	True	NA	NA	False	AATAAA	-34	NA	149175892	149251069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149176251_149177157_149177213_149250564
transcript_67262.known	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_17	89.9290377681761	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071442	True	NA	-12	True	AATAAA	-16	NA	69080365	69054729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_67266.known	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_16	210.794544150815	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071485	True	NA	-12	True	AATAAA	-16	NA	69080408	69054729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
transcript_6727.known	chr1	+	1006	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	149175723	False	NA	NA	False	AATAAA	-32	NA	149175747	149251067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149176251_149250564
transcript_67276.known	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	299.797146232063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071458	True	NA	-12	True	AATAAA	-16	NA	69080381	69054729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
transcript_6728.nnic	chr1	+	1709	4	Fusion	ENSG00000272755.1_ENSG00000274265.5	novel	1022	3	NA	NA	-15	-5	multi-exon	FALSE	canonical	1	3	junction_3	3.2659863237109	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCTGTTTTGGTGATA	149175708	False	NA	NA	False	AATAAA	-16	NA	149175732	149264811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_149176251_149259501_149259610_149262167_149262277_149263837
transcript_67290.known	chr3	-	652	3	FSM	ENSG00000144744.17	ENST00000485424.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_2	79	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGTGTTCACTTATAT	-69071440	True	NA	NA	False	AATAGA	-35	NA	69080363	69077338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69077919_69080111_69080154_69080333
transcript_67294.known	chr3	+	2134	3	FSM	ENSG00000144746.7	ENST00000273258.4	2134	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	53	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTCTTAAATACCTGA	NA	False	NA	29	True	AATAAA	-41	NA	69084936	69106092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_69085224_69101838_69102057_69104463
transcript_67301.known	chr3	-	560	3	FSM	ENSG00000114861.24	ENST00000470112.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAGAGTCATAAATAAC	-71305027	True	NA	NA	False	AATGAA	-28	NA	71306015	71296084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_71296446_71299819_71299881_71305877
transcript_67302.known	chr3	-	692	6	ISM	ENSG00000114861.24	ENST00000649431.2	1596	12	0	74775	0	1115	5prime_fragment	FALSE	canonical	0	0	junction_4	4.60434577328853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAGGAACAGTTGCA	-71305065	True	NA	NA	False	TATAAA	-1	NA	71306053	71052602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71305877
transcript_67303.known	chr3	-	1947	7	FSM	ENSG00000241163.9	ENST00000671527.1	1947	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.97905701450632	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCCTTGAAATCGTC	-72100837	True	NA	-12	True	AATAAA	-24	NA	72100942	72035754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72036521_72055860_72055963_72059686_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_67305.known	chr3	-	7217	4	FSM	ENSG00000163602.12	ENST00000477973.5	7215	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	18	junction_3	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTACTGTCCTGTTATTA	-72446589	False	NA	1	True	ATTAAA	-22	NA	72446623	72371824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495
transcript_67308.known	chr3	-	2846	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_6	14.9666295470958	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGTGGACGTATGC	-72845541	True	NA	-6	True	AATAAA	-25	NA	72848445	72749276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_67310.nic	chr3	-	1802	9	NIC	ENSG00000144736.14	novel	502	5	NA	NA	-10	665	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	56.4068646088399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAGGAGAGGAAAC	-72845578	True	NA	NA	False	AGTAAA	-43	NA	72848482	72813831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_72814556_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_67317.known	chr3	+	4957	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_7	34.8568501158667	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	72977829	True	NA	12	True	AATAAA	-16	NA	72996810	73069198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_67322.nic	chr3	+	3220	8	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-13	2005	-5	1903	intron_retention	FALSE	canonical	3	759	junction_7	37.0438240191153	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACTACATTTTTATC	72977816	True	NA	23	True	AATAAA	-17	NA	72996797	73067193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851
transcript_67326.nic	chr3	+	860	7	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-13	5070	-5	-838	5prime_fragment	FALSE	canonical	3	784	junction_2	29.3905691601159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAGAAAAATCACAGGT	72977816	True	NA	5	True	NA	NA	NA	72996797	73064128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002
transcript_6733.nnic	chr1	+	792	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-119	-3	intron_retention	FALSE	canonical	3	16	junction_2	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	149606407	True	NA	14	True	AATAAA	-28	NA	149607187	149647621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_149607555_149646598_149646786_149647383
transcript_67330.known	chr3	-	2238	7	FSM	ENSG00000244026.7	ENST00000484945.6	2406	7	168	0	12	0	multi-exon	FALSE	canonical	1	1	junction_4	36.0770779797305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTAATCTACAGATGAT	-75433444	False	NA	-11	True	AATAAA	-23	NA	75434957	75421559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75430831_75430915_75432807_75432871_75434917
transcript_67333.known	chr3	-	1068	5	FSM	ENSG00000244026.7	ENST00000478666.6	2014	5	79	867	2	299	multi-exon	FALSE	canonical	3	45	junction_2	14.7711712467224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTACTGCAGAGGTCAC	-75433533	True	NA	NA	False	NA	NA	NA	75435046	75422418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_6734.known	chr1	+	737	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	149606628	False	NA	17	True	AATAAA	-31	NA	149607408	149647624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149607555_149646598_149646946_149647380
transcript_67340.nnic	chr3	-	1939	4	FSM	ENSG00000244026.7	ENST00000690600.1	716	4	0	-1223	0	0	multi-exon	FALSE	canonical	1	2	junction_2	37.249906785864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-75433612	True	NA	-17	True	AATAAA	-17	NA	75435125	75421565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426622_75432807_75432871_75434917
transcript_67341.known	chr3	-	2152	5	FSM	ENSG00000244026.7	ENST00000497543.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	31.4642654451045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	-75433535	True	NA	-3	True	AATAAA	-31	NA	75435048	75421551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434724
transcript_67343.known	chr3	+	532	4	FSM	ENSG00000272690.6	ENST00000659018.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGGATGAGTTATCT	75434995	True	NA	NA	False	AATAAA	-16	NA	75435333	75452651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75435414_75443507_75443647_75451209_75451403_75452531
transcript_6735.nic	chr1	+	1072	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-119	-5	intron_retention	FALSE	canonical	3	38	junction_2	15	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	149606407	True	NA	12	True	AATAAA	-26	NA	149607187	149647619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_149607555_149646598_149647065_149647380
transcript_67350.nnic	chr3	-	1290	7	NNC	ENSG00000227124.11	novel	1169	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	18.2155306141643	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782627	True	NA	-5	True	AATAAA	-30	NA	75785572	75729960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75784783_75784886_75785383
transcript_67351.nic	chr3	-	1421	7	NIC	ENSG00000227124.11	novel	1169	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	17.5760253375633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782641	True	NA	-5	True	AATAAA	-30	NA	75785586	75729960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75784783_75785003_75785383
transcript_67355.nic	chr3	-	786	6	NIC	ENSG00000227124.11	novel	2341	6	NA	NA	-8	-1498	combination_of_known_junctions	TRUE	canonical	2	7	junction_2	20.370567002418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACAGAATACCATTGAAA	-75782646	True	NA	NA	False	AATAAA	-17	NA	75785591	75711140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_75711317_75716418_75716542_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_67358.known	chr3	-	1169	6	FSM	ENSG00000227124.11	ENST00000477374.5	1169	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	15.8568597143318	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782608	True	NA	-5	True	AATAAA	-30	NA	75785553	75729960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_67359.nic	chr3	-	1336	6	NIC	ENSG00000227124.11	novel	1169	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	19.5489130132598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782646	True	NA	-5	True	AATAAA	-30	NA	75785591	75729960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741866_75783305_75783365_75785383
transcript_67363.known	chr3	-	3923	5	FSM	ENSG00000227124.11	ENST00000652011.2	3923	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.6852484422014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCCTCTATTTTGATG	-75782604	True	NA	-1	True	AATAAA	-17	NA	75785549	75735867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75739346_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_67367.nic	chr3	-	1190	4	ISM	ENSG00000227124.11	ENST00000652011.2	3923	5	-42	4705	-8	-1281	5prime_fragment	FALSE	canonical	3	29	junction_3	13.6381816969859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTGAGTACGGTGACA	-75782646	True	NA	NA	False	NA	NA	NA	75785591	75740572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_75741369_75741609_75741737_75783305_75783365_75785383
transcript_67368.known	chr3	+	1767	5	FSM	ENSG00000242516.3	ENST00000669013.1	1767	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	15.3846514422654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTGTATAATGACTT	75671190	False	NA	20	True	TATAAA	-17	NA	75672584	75680092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75678832
transcript_67371.known	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	17.1075032271418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
transcript_67373.known	chr3	+	671	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75675763_75675881_75678832
transcript_67375.known	chr3	+	880	5	FSM	ENSG00000242516.3	ENST00000662338.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.6183802907977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75672455	True	NA	29	True	AATAAA	-34	NA	75672694	75679314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967_75676129_75678832
transcript_67376.known	chr3	-	2941	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.7318058827539	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGCTAATGTTTAT	-81761358	True	NA	-5	True	AATAAA	-15	NA	81761645	81489702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_67380.known	chr3	+	1006	2	FSM	ENSG00000175161.14	ENST00000485126.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCAACACATTGACTT	84956713	True	NA	2	True	ATTAAA	-14	NA	84959004	84960438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_84959669_84960096
transcript_67382.known	chr3	+	2644	7	FSM	ENSG00000083937.10	ENST00000676705.1	2644	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	177.693243790778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	87221806	True	NA	24	True	AATAAA	-14	NA	87227311	87255486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87240326_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_67386.known	chr3	+	2651	7	FSM	ENSG00000083937.10	ENST00000472024.3	2651	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	173.031227111049	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	87221803	True	NA	24	True	AATAAA	-14	NA	87227308	87255486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87240322_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_67389.known	chr3	+	2590	6	FSM	ENSG00000083937.10	ENST00000263780.9	2590	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	32.4653661614959	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAGAATGATCTT	87221803	True	NA	94	True	ATTAAA	-22	NA	87227308	87255556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_6739.known	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	149606526	True	NA	3	True	AATAAA	-17	NA	149607306	149647610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149607555_149646598
transcript_67392.known	chr3	+	2528	5	FSM	ENSG00000083937.10	ENST00000471660.5	2528	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	158.667104341133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTTCAAAAGA	87221765	True	NA	86	True	ATTAAA	-14	NA	87227270	87255548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_67396.nic	chr3	+	965	4	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-63	8923	-44	-2480	5prime_fragment	FALSE	canonical	3	33	junction_3	5.90668171555645	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTTTTTTTT	88058137	True	NA	NA	False	ATTAAA	-18	NA	88059210	88126575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133
transcript_67397.known	chr3	-	4548	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	373.652542105928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-88048790	True	NA	48	True	AATATA	-19	NA	88059005	88051949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
transcript_6740.known	chr1	+	554	2	ISM	ENSG00000277147.7	ENST00000610297.2	885	3	40505	5	151	-5	3prime_fragment	FALSE	canonical	3	38	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	149646640	False	NA	12	True	AATAAA	-26	NA	149646749	149647619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_149647065_149647380
transcript_67401.known	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	83.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-88048833	True	NA	54	True	AATATA	-25	NA	88059048	88051943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_88056000_88058018_88058224_88058814
transcript_67402.known	chr3	-	961	3	FSM	ENSG00000163320.12	ENST00000675130.1	961	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCTCACTGCAAAACTTA	-88048236	False	NA	79	True	NA	NA	NA	88058451	88055322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_88056000_88058018_88058224_88058372
transcript_67404.nic	chr3	+	483	2	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-63	49054	-44	-42611	5prime_fragment	TRUE	canonical	3	46	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGAGAATTTGTTTT	88058137	True	NA	NA	False	TATAAA	-18	NA	88059210	88086444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_88059506_88086256
transcript_67406.known	chr3	+	2414	3	FSM	ENSG00000179021.10	ENST00000318887.8	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	15	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	88148232	True	NA	18	True	AATAAA	-29	NA	88149958	88157965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_88150186_88153229_88153472_88156020
transcript_67409.known	chr3	+	3659	11	FSM	ENSG00000169379.17	ENST00000335438.7	3659	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.1629205281719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTCTCTTTTCAA	93979578	True	NA	5	True	AATAAA	-16	NA	93980189	94055279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_93996562_93996685_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_6741.known	chr1	+	1547	2	FSM	ENSG00000270882.3	ENST00000618193.1	1547	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATCTGCTGAGAAATGT	NA	False	NA	NA	False	AATAAA	-28	NA	149832667	149834484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149833865_149834134
transcript_67410.known	chr3	+	3971	10	FSM	ENSG00000169379.17	ENST00000394222.8	3971	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	12.212117034697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAGAAATGTAGTTTG	93979543	True	NA	NA	False	TATAAA	-20	NA	93980154	94055678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_67413.known	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	4.3081318457076	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	94062369	True	NA	13	True	AATAAA	-16	NA	94063060	94131832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
transcript_67417.known	chr3	+	751	2	FSM	ENSG00000178694.10	ENST00000477077.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCAGCAACTTTTT	94062288	True	NA	NA	False	AGTAAA	-13	NA	94062979	94064403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_94063139_94063811
transcript_67418.known	chr3	+	1399	3	FSM	ENSG00000169379.17	ENST00000492165.3	1399	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGTCATGTGGTTAG	93979530	True	NA	NA	False	ATTAAA	-12	NA	93980141	94004645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_94003658
transcript_67421.nic	chr3	+	1594	9	NIC	ENSG00000113966.10	novel	1705	10	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_8	18.8414436814168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTGTACCTATTTTC	NA	False	NA	6	True	ATTAAA	-18	NA	97764532	97801109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023_97798204_97800702
transcript_67422.known	chr3	+	1590	9	FSM	ENSG00000113966.10	ENST00000394206.5	1590	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.2886290267689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	10	True	AATAAA	-20	NA	97764520	97798535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_97764978_97766631_97766691_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_67423.known	chr3	+	3988	8	FSM	ENSG00000113966.10	ENST00000463745.6	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	10.1900311429297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGTGATTAAGAAATGG	97764248	True	NA	57	True	AATAAA	-35	NA	97764757	97801229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_67427.nic	chr3	+	901	5	ISM	ENSG00000113966.10	ENST00000496713.1	851	7	-12	5996	-3	-2652	5prime_fragment	FALSE	canonical	3	48	junction_1	6.22494979899437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGATGGAAAAATAAAATA	97764245	True	NA	NA	False	CATAAA	-29	NA	97764754	97785351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954
transcript_6743.known	chr1	+	942	2	FSM	ENSG00000270882.3	ENST00000614272.1	942	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	149832669	149834631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149833115_149834134
transcript_67430.known	chr3	-	2232	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	38.0383172636082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	-97972076	False	NA	NA	False	TATAAA	-11	NA	97972087	97944559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_67431.known	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	15.098033556856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-97971032	True	NA	-3	True	AATAAA	-17	NA	97972431	97941817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_67436.known	chr3	-	2709	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	6.89605362185907	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTATATTTTTTGT	-98590670	True	NA	NA	False	AATAAA	-23	NA	98593611	98579445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
transcript_67439.known	chr3	-	2170	6	FSM	ENSG00000080822.17	ENST00000394181.6	2170	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	372.515019831416	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATTGTATATAGAGTGT	-98512561	True	NA	-13	True	AATAAA	-19	NA	98523018	98515482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521697_98522848
transcript_67440.known	chr3	-	865	6	FSM	ENSG00000080822.17	ENST00000502299.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_4	376.912509741982	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGAAAGAGTACACCTTA	-98512474	True	NA	NA	False	NA	NA	NA	98522931	98516702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521704_98522848
transcript_67441.known	chr3	-	2124	6	FSM	ENSG00000080822.17	ENST00000510545.5	2124	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	381.087601477665	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCAATTGTATATAGA	-98512502	True	NA	-17	True	AATAAA	-15	NA	98522959	98515486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521719_98522848
transcript_67442.known	chr3	-	573	6	FSM	ENSG00000080822.17	ENST00000510541.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	373.394911588254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTTGTGTCTCTG	-98512445	True	NA	NA	False	NA	NA	NA	98522902	98516773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98521652_98521704_98522848
transcript_67447.known	chr3	-	999	5	FSM	ENSG00000080822.17	ENST00000513287.5	999	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	341.352731789274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCTGCTTTACAATTG	-98512297	False	NA	-68	True	AATGAA	-26	NA	98522754	98516652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522541
transcript_67448.known	chr3	-	916	5	FSM	ENSG00000080822.17	ENST00000508902.5	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	307.272680204407	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	98523041	98516710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98522848
transcript_67449.known	chr3	-	582	5	FSM	ENSG00000080822.17	ENST00000512147.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	314.393364274757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	-98512442	True	NA	NA	False	NA	NA	NA	98522899	98516710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98522848
transcript_67455.known	chr3	-	642	4	FSM	ENSG00000080822.17	ENST00000511081.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	324.988546806738	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTTTATTTATAC	-98512448	True	NA	41	True	NA	NA	NA	98522905	98516543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98522848
transcript_67458.known	chr3	-	815	4	FSM	ENSG00000080822.17	ENST00000507411.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_3	62.3591746791654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAGAGCTCCCTGAC	-98512418	True	NA	NA	False	NA	NA	NA	98522875	98516822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98517190_98518884_98518996_98521132_98521443_98522848
transcript_6746.known	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149842200_149842700
transcript_67464.known	chr3	+	2837	11	FSM	ENSG00000064225.13	ENST00000469105.5	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14.3418966667592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTTGATTACTGACA	98732207	True	NA	10	True	AATAAA	-24	NA	98732265	98795254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98771120_98771191_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_67469.nic	chr3	+	2081	11	NIC	ENSG00000064225.13	novel	2837	11	NA	NA	-2	449	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	15.0479234447813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGCTTTGTATTAT	98732204	True	NA	NA	False	AGTAAA	-29	NA	98732262	98794393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_98732533_98756368_98756541_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_6747.known	chr1	+	564	1	FSM	ENSG00000288859.1	ENST00000607355.3	534	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149851060	149851624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149851100_149851600
transcript_67470.known	chr3	+	1886	10	FSM	ENSG00000064225.13	ENST00000265261.11	3385	10	0	1499	0	418	multi-exon	FALSE	canonical	3	13	junction_1	12.838983845026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACTAAAGAAAGAATA	NA	False	NA	84	True	CATAAA	-18	NA	98732254	98794362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_6748.known	chr1	-	1694	2	FSM	ENSG00000270276.3	ENST00000612061.1	1694	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	149861148	149859184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149859682_149859951
transcript_67481.nnic	chr3	+	1263	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	2	34	junction_1	236.345932903446	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTGAGCGGACCGTG	99804855	True	NA	13	True	AATAAA	-22	NA	99817821	100178603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_67488.known	chr3	+	1056	10	FSM	ENSG00000184220.12	ENST00000489081.5	1056	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	196.766703998591	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCCTTGTTGAGCGGAC	NA	False	NA	9	True	AATAAA	-18	NA	100114929	100178599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100114999_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_67490.known	chr3	+	3697	19	FSM	ENSG00000036054.13	ENST00000394144.9	3697	19	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	106.29543327821	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	100256098	True	NA	22	True	AATAAA	-19	NA	100260991	100325238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100311832_100311878_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_67492.known	chr3	+	3656	18	FSM	ENSG00000036054.13	ENST00000344949.9	3656	18	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_14	32.2754151351354	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCTCTCTTTCT	100256107	True	NA	35	True	AATAAA	-32	NA	100261000	100325251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_67497.known	chr3	+	7233	10	FSM	ENSG00000114021.12	ENST00000394140.9	7233	10	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	41.4124094242413	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGAAAACAGTGCCTT	100331978	True	NA	NA	False	AGTAAA	-25	NA	100334756	100361635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_6750.known	chr1	-	1132	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	-51	-685	-51	685	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATGAGATAACTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	149861210	149860078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149860100_149861200
transcript_67502.known	chr3	+	1469	9	FSM	ENSG00000114021.12	ENST00000465368.5	1469	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	40.2150469351958	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	100331960	True	NA	9	True	ATTAAA	-15	NA	100334738	100355351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_6751.known	chr1	+	1234	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCCTGTTTAATC	NA	False	NA	NA	False	TTTAAA	-5	NA	149861270	149862504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149861300_149862500
transcript_67512.known	chr3	+	1864	4	FSM	ENSG00000206535.8	ENST00000383693.8	1864	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	0.471404520791032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGAGTTTACTTTCTTA	100400943	True	NA	18	True	AATAAA	-15	NA	100401538	100456319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100402440_100429696_100429886_100451718_100451950_100455776
transcript_67516.known	chr3	+	1723	4	FSM	ENSG00000206535.8	ENST00000466996.5	1723	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	19.09624744987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATTTTAATAGAATAAA	100401200	False	NA	NA	False	AATAAA	-10	NA	100401531	100456188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100402440_100429696_100429886_100451735_100451950_100455776
transcript_67518.nnic	chr3	+	1618	7	NNC	ENSG00000181458.10	novel	1910	8	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	87.4555442623406	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491917	True	NA	19	True	AATAAA	-25	NA	100492564	100577444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556823_100558404_100558590_100568821_100568968_100576924
transcript_6752.known	chr1	-	2194	1	FSM	ENSG00000184678.11	ENST00000369155.4	2224	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTGGATTCTTTTA	-149866280	False	NA	-3	True	AATAAA	-19	NA	149886652	149884458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149884500_149886700
transcript_67521.nnic	chr3	+	1768	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_2	64.2168634826987	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491917	True	NA	19	True	AATAAA	-25	NA	100492564	100577444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67522.nic	chr3	+	1672	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	82.9397371589759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491942	True	NA	19	True	AATAAA	-25	NA	100492589	100577444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100519532_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67523.nic	chr3	+	1412	6	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	84.9861165132282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTCTGTGGTGACT	100491912	True	NA	3	True	ATTAAA	-16	NA	100492559	100570914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100570608
transcript_67524.known	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.4982352330509	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491971	True	NA	19	True	AATAAA	-25	NA	100492618	100577444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67527.nnic	chr3	+	1018	3	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	2	21	junction_1	86.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491929	True	NA	19	True	AATAAA	-25	NA	100492576	100577444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100568821_100568968_100576924
transcript_67528.known	chr3	+	1804	8	FSM	ENSG00000114354.15	ENST00000675047.1	1804	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	238.377851320126	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709273	False	NA	12	True	AATAAA	-15	NA	100709294	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67529.known	chr3	+	1753	8	FSM	ENSG00000114354.15	ENST00000418917.7	1753	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	293.599199242638	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709115	False	NA	12	True	AATAAA	-15	NA	100709352	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
transcript_6753.known	chr1	+	494	1	FSM	ENSG00000184260.6	ENST00000331380.4	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTCAAAAAAAGAGCTA	149835639	True	NA	41	True	NA	NA	NA	149886917	149887411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149886900_149887400
transcript_67530.known	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000676431.1	1793	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	292.412554519836	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709260	False	NA	12	True	AATAAA	-15	NA	100709462	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67531.known	chr3	+	1906	8	FSM	ENSG00000114354.15	ENST00000675553.1	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	257.911628592557	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100707981	True	NA	12	True	AATAAA	-15	NA	100709361	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67534.known	chr3	+	1783	8	FSM	ENSG00000114354.15	ENST00000476228.5	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_6	183.213937621502	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100706771	False	NA	12	True	AATAAA	-15	NA	100709605	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67535.known	chr3	+	1907	8	FSM	ENSG00000114354.15	ENST00000240851.9	1907	8	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	74.1484996476665	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100708712	True	NA	12	True	AATAAA	-15	NA	100709493	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67536.nic	chr3	+	2044	8	NIC	ENSG00000114354.15	novel	1759	9	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	285.051803383604	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709859	False	NA	12	True	AATAAA	-15	NA	100709918	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67537.known	chr3	+	2005	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	248.679204878043	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709705	True	NA	12	True	AATAAA	-15	NA	100709969	100748964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67540.known	chr3	+	1813	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	0	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	101548316	True	NA	23	True	AGTAAA	-23	NA	101561867	101566446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101562004_101564769
transcript_67541.known	chr3	+	1017	2	FSM	ENSG00000174173.7	ENST00000495642.1	1017	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATAAGAGTATGCAGCC	101548489	False	NA	NA	False	NA	NA	NA	101562040	101565717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101562110_101564769
transcript_67546.known	chr3	+	2285	5	FSM	ENSG00000081154.12	ENST00000265260.8	2285	5	0	0	0	0	multi-exon	FALSE	canonical	3	2140	junction_1	199.924204387563	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTACTGGTTTTTG	101537385	True	NA	43	True	AATAAA	-43	NA	101574179	101594465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626
transcript_67550.known	chr3	+	2165	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	874.80312070774	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	101537395	True	NA	-15	True	NA	NA	NA	101574189	101594407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
transcript_67552.known	chr3	+	786	5	FSM	ENSG00000081154.12	ENST00000498274.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1074.29569951666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGGTGGGTGTAAAG	101537391	True	NA	-43	True	ATTAAA	-18	NA	101574185	101592771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101579588_101580005_101585436_101585512_101590214_101590271_101592626
transcript_6756.known	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	149899067	True	NA	16	True	ATTAAA	-17	NA	149899567	149900795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149899673_149900009
transcript_67564.known	chr3	+	2028	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	1195.04793023358	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	101537399	True	NA	15	True	AATAAA	-15	NA	101574193	101594437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
transcript_6757.nnic	chr1	+	920	2	NIC	ENSG00000178096.9	novel	891	2	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	149899096	True	NA	16	True	ATTAAA	-17	NA	149899596	149900795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_149899731_149900009
transcript_67570.known	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	101537424	True	NA	21	True	AGTAAA	-27	NA	101574218	101593251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101590214_101590271_101592626
transcript_67572.known	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101576500_101576900
transcript_67576.known	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_5	1337.9815544319	8464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648011	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_6758.known	chr1	+	811	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTTGTAAGGGATG	149899125	True	NA	NA	False	NA	NA	NA	149899625	149900548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149899731_149899842
transcript_67584.known	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	3286.78676673739	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	-101647998	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_67585.known	chr3	-	799	5	FSM	ENSG00000114391.13	ENST00000469605.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_4	1493.51270081643	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAAGTTTCACAGT	-101647988	True	NA	NA	False	NA	NA	NA	101686695	101682041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_67587.known	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7395	junction_1	521.029029901406	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648005	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
transcript_67588.known	chr3	+	7672	11	FSM	ENSG00000182504.11	ENST00000341893.8	7672	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.35163526410386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCATCTGTTTATTTT	101723988	True	NA	15	True	AATAAA	-17	NA	101724613	101770562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633_101758424_101762484_101762561_101764846
transcript_67589.known	chr3	+	2870	11	FSM	ENSG00000182504.11	ENST00000494050.5	2870	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	7.70454411370329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATAAATGAGAAATATG	101724029	True	NA	NA	False	GATAAA	-3	NA	101724654	101765978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757810_101758424_101762484_101762561_101764846
transcript_67592.known	chr3	+	8568	8	FSM	ENSG00000144815.17	ENST00000273347.10	8568	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_6	22.2829668636135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTTTTTCT	101777359	True	NA	NA	False	ATTAAA	-17	NA	101779210	101828231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_67593.nnic	chr3	+	1640	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-14	4942	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	36.158539793526	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGAGAAGTTAACATT	101777336	True	NA	NA	False	AATAAA	-26	NA	101779187	101806242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_67594.nic	chr3	+	1566	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-23	21095	-14	5836	5prime_fragment	FALSE	canonical	3	68	junction_5	18.004443895883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGCTTGATGATTTGT	101777336	True	NA	NA	False	AATAAA	-13	NA	101779187	101807136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_67595.nic	chr3	+	1705	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-23	20956	-14	5975	5prime_fragment	FALSE	canonical	3	68	junction_5	18.004443895883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATCTTATGTGCATAAT	101777336	True	NA	NA	False	ATTAAA	-22	NA	101779187	101807275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_67599.nic	chr3	+	1715	5	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-23	26009	-14	922	5prime_fragment	FALSE	canonical	3	88	junction_1	12.794041581924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTTTACCCTCAT	101777336	True	NA	NA	False	ATTAAA	-18	NA	101779187	101802222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234
transcript_6760.known	chr1	+	743	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTTAATGGACTGCT	149899105	True	NA	19	True	ATTAAA	-20	NA	149899605	149900798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149899673_149900122
transcript_67600.known	chr3	-	3861	20	FSM	ENSG00000114423.23	ENST00000645425.1	3861	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.7184976438326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTTTTCACATAACATAGA	-105866067	True	NA	-18	True	AATAAA	-15	NA	105868920	105658282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_105659230_105670232_105670353_105671020_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_67601.known	chr3	-	3669	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.4798520807365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAATGCAAAAAAAAAA	-105866186	True	NA	NA	False	NA	NA	NA	105869039	105658414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_67602.known	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	19.0237830356545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-105866159	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_67607.known	chr3	+	5519	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	107240474	True	NA	NA	False	NA	NA	NA	107240663	107251102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107241088_107246007
transcript_67609.known	chr3	+	9009	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_13	13.3411453469914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	107518864	True	NA	22	True	AATAAA	-34	NA	107522961	107811339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_6761.known	chr1	-	4378	13	FSM	ENSG00000159164.10	ENST00000369146.8	4378	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	18.273196825466	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATACCTGCTTCTGTG	-149900983	False	16861	49	True	AATAAA	-28	NA	149917844	149903317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149905198_149905879_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_67611.known	chr3	+	8930	17	FSM	ENSG00000114439.19	ENST00000415149.6	8930	17	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_10	8.00561326507845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAACATCGAATGATG	NA	False	NA	7	True	AATAAA	-19	NA	107522935	107811324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_67613.nic	chr3	+	1784	12	ISM	ENSG00000114439.19	ENST00000402543.5	3980	17	-20	33276	5	0	5prime_fragment	FALSE	canonical	0	0	junction_4	21.5801408553986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	107518843	True	NA	7	True	ATTAAA	-12	NA	107522940	107773066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_107523108_107526326_107526399_107645835_107645910_107661827_107661945_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_67619.known	chr3	+	1586	11	FSM	ENSG00000114439.19	ENST00000402163.6	1586	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5274071100092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	107525300	True	NA	7	True	ATTAAA	-12	NA	107525401	107773066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107525488_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_67621.known	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	27.3685951411467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088336	True	NA	NA	False	ATTAAA	-19	NA	108091031	108043090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_67622.known	chr3	-	5228	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	45.766902615318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088330	True	NA	NA	False	ATTAAA	-19	NA	108091025	108043090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_67623.nic	chr3	-	927	3	ISM	ENSG00000196776.17	ENST00000398258.7	469	7	7104	0	3482	0	3prime_fragment	FALSE	canonical	3	121	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTGCCCAATTGAGA	NA	False	NA	-23	True	AATAAA	-15	NA	108051257	108047078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_108047293_108049618_108049652_108050577
transcript_67628.known	chr3	-	3057	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	30.2927384037825	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTTTCTTCCATC	-108216778	True	NA	NA	False	AATAAA	-16	NA	108222424	108160811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_67634.known	chr3	-	755	4	FSM	ENSG00000114446.5	ENST00000465024.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	4.89897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGAGTATCATCATT	-108216714	True	NA	NA	False	AATATA	-41	NA	108222360	108213798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108214022_108218534_108218654_108219409_108219573_108222110
transcript_67636.known	chr3	-	4066	21	FSM	ENSG00000163507.15	ENST00000295746.13	4066	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	10.3898989407982	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAAAACGTTAAAGAAA	-108587624	True	NA	NA	False	AATAAA	-19	NA	108589438	108549863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_6764.known	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1243	junction_5	153.723908355207	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-149910942	True	NA	-20	True	AATAAA	-18	NA	149927803	149923316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
transcript_67647.nnic	chr3	-	1393	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	1534	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	29.757352032733	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109314960	False	NA	-4	True	AATAAA	-22	NA	109314983	109293787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109314739
transcript_67648.known	chr3	-	1383	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	20.2530861845794	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109316494	False	NA	-4	True	AATAAA	-22	NA	109316517	109293787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
transcript_67649.nnic	chr3	-	1380	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	24.3307290273021	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	NA	False	NA	-4	True	AATAAA	-22	NA	109316567	109293787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
transcript_67652.nic	chr3	-	1238	8	ISM	ENSG00000163530.4	ENST00000478945.1	1383	9	1873	0	1873	0	3prime_fragment	FALSE	canonical	3	86	junction_7	7.51868420968044	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109314621	False	NA	-4	True	AATAAA	-22	NA	109314644	109293787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509
transcript_67689.nic	chr3	-	2504	7	NIC	ENSG00000121570.13	novel	2788	7	NA	NA	0	-211	combination_of_known_junctions	FALSE	canonical	3	244	junction_6	1813.83663358455	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTGTATTGTTCCTT	-109266338	True	NA	-8	True	AATAAA	-20	NA	109337546	109326354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333921_109337463
transcript_67690.known	chr3	-	2817	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-3	-26	3	multi-exon	FALSE	canonical	3	3947	junction_6	704.701453729797	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGTTTATTTACTC	-109266364	True	NA	-2	True	AATAAA	-21	NA	109337572	109326140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_677.known	chr1	+	431	5	FSM	ENSG00000171735.19	ENST00000461311.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	2052.40943770974	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTTAAGACAGTTCT	6762077	False	NA	NA	False	NA	NA	NA	6785551	6887787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6871841_6887653
transcript_6770.known	chr1	+	2315	15	FSM	ENSG00000136631.15	ENST00000643970.1	2315	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.8376126635526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCTGCTTTTCATTA	150067129	True	NA	NA	False	NA	NA	NA	150067278	150145163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067607_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_67709.known	chr3	-	1087	6	FSM	ENSG00000121570.13	ENST00000463966.5	1087	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	1973.94107308197	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTATTTTTAGTA	-109266314	True	NA	NA	False	NA	NA	NA	109337522	109327524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109328025_109328889_109329082_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_6771.known	chr1	+	2328	15	FSM	ENSG00000136631.15	ENST00000644510.2	2328	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	16.2839911369092	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	150066017	True	NA	20	True	AATAAA	-22	NA	150067775	150145329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_6773.nnic	chr1	+	2269	14	NNC	ENSG00000136631.15	novel	2328	15	NA	NA	-20	1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	49.8962236656711	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTTTATAAGAATTAC	150067178	True	NA	NA	False	AATAAA	-17	NA	150067327	150094786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150094540
transcript_67736.known	chr3	-	1225	5	FSM	ENSG00000121570.13	ENST00000478791.1	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_4	407.581510252857	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGGGACCACAGTTT	-109266307	True	NA	NA	False	NA	NA	NA	109337515	109329975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_6774.nic	chr1	+	2331	14	NIC	ENSG00000136631.15	novel	2328	15	NA	NA	-20	5529	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	46.6321371268544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTCCATGTAACT	150067178	True	NA	NA	False	GATAAA	-17	NA	150067327	150099157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150098849
transcript_67760.known	chr3	-	680	2	FSM	ENSG00000121570.13	ENST00000489281.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTACAGGCTGGTTTT	-109266337	True	NA	NA	False	AGTAAA	-13	NA	109337545	109333395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109333994_109337463
transcript_67765.nnic	chr3	-	1648	3	NIC	ENSG00000242242.7	novel	1415	4	NA	NA	-76516	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGAACTTTTACTC	-110966100	True	NA	-16	True	AGTAAA	-17	NA	110969992	110892139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_110892604_110893137_110893831_110969501
transcript_67766.nnic	chr3	-	1471	3	NNC	ENSG00000242242.7	novel	1415	4	NA	NA	-77934	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	43	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGAACTTTTACTC	NA	False	NA	-16	True	AGTAAA	-17	NA	110971410	110892139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_110892604_110893137_110893831_110971096
transcript_67767.known	chr3	+	5197	6	FSM	ENSG00000177707.11	ENST00000485303.6	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	13.8506317545446	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTAATAAGTTCAT	111069031	True	NA	NA	False	AATAAA	-25	NA	111071815	111137560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111133634
transcript_67770.nnic	chr3	+	760	3	NNC	ENSG00000153283.13	novel	500	2	NA	NA	-5807	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTATTGGTCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	111561773	111579459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_111561976_111567522_111567648_111579026
transcript_67771.known	chr3	+	1861	2	FSM	ENSG00000144824.21	ENST00000478922.1	1861	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGTAGTCAGTGAAAT	111855338	True	NA	NA	False	ATTAAA	-19	NA	111859749	111885795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111859879_111884063
transcript_67773.known	chr3	+	5543	18	FSM	ENSG00000144824.21	ENST00000393925.7	5543	18	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	30.564810034691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCACATTTGAAAATAAA	111855384	True	NA	4	True	ATTAAA	-12	NA	111859795	111976247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
transcript_67774.known	chr3	+	801	6	FSM	ENSG00000144827.9	ENST00000494817.1	801	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	115.976894250536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATGACATTGTACCTT	111975523	True	NA	NA	False	NA	NA	NA	111979052	111991540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111990699_111990752_111991376
transcript_67778.known	chr3	+	2604	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	15.2704780540755	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	111975496	True	NA	21	True	AATAAA	-24	NA	111979025	111993368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
transcript_67782.known	chr3	+	1339	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	107.079409785448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	111975480	True	NA	NA	False	TATAAA	-15	NA	111979009	111992271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
transcript_67785.known	chr3	+	890	3	FSM	ENSG00000144827.9	ENST00000493784.1	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTTTCTTATGCTTA	111975522	True	NA	NA	False	ATTAAA	-28	NA	111979051	111991976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111986913_111987052_111991376
transcript_67786.known	chr3	+	1129	5	FSM	ENSG00000144834.14	ENST00000478951.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.03108891324554	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAAAGTTCATTC	111998879	False	NA	6	True	AATAAA	-18	NA	111998921	112013885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111999115_111999420_111999603_112000771_112000947_112011762_112011866_112013409
transcript_67787.known	chr3	+	2237	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	8.21218606705912	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	112085015	True	NA	29	True	AATACA	-17	NA	112086388	112118210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_67788.nnic	chr3	+	2163	6	NNC	ENSG00000114529.13	novel	2054	4	NA	NA	305	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.498421008891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	112085369	False	NA	29	True	AATACA	-17	NA	112086742	112118210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_112086826_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_67789.known	chr3	+	965	4	FSM	ENSG00000114529.13	ENST00000484828.1	965	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	36.1601376595216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGCACTTTAGAAGA	112085063	True	NA	NA	False	NA	NA	NA	112086436	112117239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112116641
transcript_67801.known	chr3	+	1524	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	129.364364833941	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGCTTTGCTAA	112328560	True	NA	NA	False	NA	NA	NA	112333155	112362132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_67808.known	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	81.6465553468118	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	112328560	True	NA	20	True	ATTAAA	-16	NA	112333155	112362812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_67810.known	chr3	+	1097	5	FSM	ENSG00000239482.6	ENST00000498032.5	1097	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.35607132140714	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATTGGTTAAATTCAGC	112302463	False	NA	NA	False	AATAAA	-31	NA	112302477	112332791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112302715_112326521_112326651_112327610_112327695_112329345_112329387_112332185
transcript_67813.known	chr3	+	2017	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	117.067021402272	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	112328582	True	NA	17	True	ATTAAA	-13	NA	112333177	112362809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
transcript_67817.known	chr3	-	1568	12	FSM	ENSG00000144848.11	ENST00000283290.10	1568	12	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_9	49.4373298912558	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112554233	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
transcript_67818.nic	chr3	-	1201	12	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	193.849221461313	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112561928	False	NA	-3	True	AATAAA	-17	NA	112561984	112532509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561845
transcript_6782.known	chr1	+	382	2	FSM	ENSG00000136631.15	ENST00000643611.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	150066040	True	NA	NA	False	AATAAA	-16	NA	150067798	150068859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068629
transcript_67821.nnic	chr3	-	1151	11	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_10	266.773012128289	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112561928	False	NA	-3	True	AATAAA	-17	NA	112561984	112532509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112558375_112558418_112561845
transcript_67822.known	chr3	+	2444	8	FSM	ENSG00000138459.9	ENST00000261034.6	2444	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	86.6119659923571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTTGCCACTCTG	112558442	True	NA	3	True	ATTAAA	-17	NA	112562071	112584156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112580707_112581178_112581327_112582670
transcript_67826.known	chr3	+	4366	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	30.8526966226437	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCGAAGTTCTGATATGT	112558415	True	NA	NA	False	AATAAA	-19	NA	112562044	112585579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
transcript_6783.known	chr1	+	2350	16	FSM	ENSG00000136631.15	ENST00000644526.1	2350	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	61.8145613913097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	150066089	True	NA	20	True	AATAAA	-22	NA	150067847	150145329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150142837_150142932_150144708
transcript_67833.nic	chr3	-	1193	7	ISM	ENSG00000091986.16	ENST00000439685.6	3557	8	3207	164	4	-164	3prime_fragment	TRUE	canonical	2	5	junction_5	8.19891591749923	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATGAGTTATTATTGAAA	-112637796	False	NA	0	True	AATAAA	-18	NA	112638093	112605264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027
transcript_6784.nic	chr1	+	1410	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	-234	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	90.4897784282844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	150149363	False	NA	7	True	GATAAA	-42	NA	150149681	150159628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_67841.known	chr3	-	4820	9	FSM	ENSG00000163608.15	ENST00000314400.10	4820	9	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_7	17.6913644188344	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-113016129	True	NA	-4	True	ATTAAA	-18	NA	113019671	113002443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113017447_113017603_113019541
transcript_67845.known	chr3	-	1382	8	FSM	ENSG00000163608.15	ENST00000462295.5	1382	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	38.5243098442995	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAACTGCTAAGATCT	-113016124	True	NA	NA	False	NA	NA	NA	113019666	113005480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011166_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_67846.known	chr3	-	1817	8	FSM	ENSG00000163608.15	ENST00000469169.5	1817	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.7546600013533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	-113016122	True	NA	NA	False	NA	NA	NA	113019664	113005242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013362_113013952_113014033_113019541
transcript_67847.known	chr3	-	2056	8	FSM	ENSG00000163608.15	ENST00000473284.5	2056	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	25.392430175233	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	NA	False	NA	NA	False	NA	NA	NA	113019861	113005242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_6785.known	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	28.7791591260064	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	150149768	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_67856.known	chr3	-	4672	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	41.3753147017236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-113016191	True	NA	-4	True	ATTAAA	-18	NA	113019733	113002443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_67859.known	chr3	+	1921	6	FSM	ENSG00000163607.18	ENST00000383678.8	1921	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	15.9423963067037	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTTTTCTTTAGA	112988760	True	NA	3	True	ATTAAA	-13	NA	112990983	113001969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_67864.known	chr3	-	1576	6	FSM	ENSG00000163608.15	ENST00000489848.5	1576	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	47.6126033734767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTTAATATGAAAAATCT	-113016128	True	NA	NA	False	NA	NA	NA	113019670	113005321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113019541
transcript_67866.known	chr3	+	715	5	FSM	ENSG00000163607.18	ENST00000488781.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	46.9434500223407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCGGTTTAGCTGAA	112988785	True	NA	NA	False	NA	NA	NA	112991008	113000919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112993025_112993125_112996891_112996992_112999445_112999565_113000849
transcript_67869.known	chr3	+	1787	5	FSM	ENSG00000163607.18	ENST00000383677.7	1787	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	49.2817156763033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGGATAACAAATTA	112988761	True	NA	-31	True	ATTAAA	-13	NA	112990984	113001935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_67872.known	chr3	+	679	4	FSM	ENSG00000163607.18	ENST00000295864.9	679	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	58.3399996190912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGCTAACTGGAGTT	112988763	True	NA	NA	False	NA	NA	NA	112990986	113000960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112996891_112996992_112999445_112999565_113000849
transcript_67874.known	chr3	-	1512	4	FSM	ENSG00000163608.15	ENST00000469809.5	1512	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.3594315963113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCATATTAAAGTGAG	-113016116	True	NA	-49	True	NA	NA	NA	113019658	113004953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113013948_113014033_113019541
transcript_67876.known	chr3	-	1212	3	FSM	ENSG00000163608.15	ENST00000472705.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	66.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAATGAGGAGCGGGGG	-113016122	True	NA	NA	False	NA	NA	NA	113019664	113005175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113019541
transcript_67878.known	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_17	20.300510502044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	-113513820	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
transcript_6788.known	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1080	junction_5	36.8947451844056	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-150190470	True	NA	-2	True	AATAAA	-24	NA	150236112	150218416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_67881.nic	chr3	-	1960	4	ISM	ENSG00000163611.11	ENST00000480527.1	590	6	0	4662	0	1058	5prime_fragment	FALSE	canonical	0	0	junction_3	51.0751080925598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAAGATTAGCTGGGTAC	-113513851	True	NA	NA	False	AAAAAG	-2	NA	113515187	113497877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_113499583_113503179_113503228_113506506_113506606_113515079
transcript_67882.known	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_4	511.14723906131	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	-113746282	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
transcript_67887.known	chr3	-	958	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_3	623.695588809156	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATCATGTTTGA	-113716388	True	NA	-33	True	NA	NA	NA	113746249	113721589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
transcript_67888.known	chr3	+	2266	16	FSM	ENSG00000114573.10	ENST00000470455.5	2266	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	93.4279520391099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGGGTGATGACCCTC	113741577	True	NA	NA	False	AGTAAA	-32	NA	113747036	113809697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_113747114_113778740_113778836_113780731_113780784_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_67889.known	chr3	+	4575	15	FSM	ENSG00000114573.10	ENST00000273398.8	4575	15	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_12	22.1147286777341	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTTCTTTTTCTCTT	113741575	True	NA	11	True	AATAAA	-18	NA	113747034	113812056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_113747114_113778740_113778836_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_67895.known	chr3	+	3475	13	FSM	ENSG00000178075.20	ENST00000440446.2	3475	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.70975657780022	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATTTCTGAGTTGTA	NA	False	NA	-2	True	AATAAA	-37	NA	113897469	113947160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_113897814_113901030_113901147_113904139_113904273_113908957_113909121_113915700_113915839_113930713_113930833_113933510_113933654_113934431_113934536_113936265_113936443_113938085_113938144_113939885_113939997_113940239_113940346_113945397
transcript_67897.known	chr3	+	4023	10	FSM	ENSG00000151576.10	ENST00000281273.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.4132108219662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGAGATTTCTCATT	114051666	True	NA	88	True	ATTAAA	-19	NA	114056736	114088422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_67900.known	chr3	+	3844	9	FSM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	62.7184930861704	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	114051664	True	NA	15	True	AATAAA	-20	NA	114056734	114088349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_67904.known	chr3	-	8821	6	FSM	ENSG00000185565.12	ENST00000539563.5	8821	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	3.57770876399966	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTTGTGGTTGACTGC	NA	False	NA	1	True	AATAAA	-35	NA	116086561	115802362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_115810415_115841844_115841994_115842457_115842579_115852482_115852618_116019514_116019641_116086323
transcript_67905.known	chr3	+	553	4	FSM	ENSG00000240922.1	ENST00000490351.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTATTTTTAGTAT	116359880	False	NA	NA	False	ATTAAA	-23	NA	116360023	116370090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_116360094_116367941_116368036_116368142_116368272_116369830
transcript_67906.known	chr3	+	2028	8	FSM	ENSG00000114638.8	ENST00000264234.8	2028	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.63887656499994	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTCATTTTTACCAA	119173569	True	NA	NA	False	AGTAAA	-18	NA	119173597	119205143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119173639_119186713_119186811_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_67911.known	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	54.2584958785258	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237982	True	NA	-4	True	AATAAA	-41	NA	119240946	119211741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_67918.known	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	27.3361538282628	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237914	True	NA	-4	True	AATAAA	-41	NA	119240878	119211741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_67919.nic	chr3	-	2201	8	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	47.0921805546075	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237943	True	NA	-4	True	AATAAA	-41	NA	119240907	119211741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_67923.nnic	chr3	-	2205	7	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.6434509499715	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-4	True	AATAAA	-41	NA	119240972	119211741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_119212682_119216239_119216345_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_67926.known	chr3	-	611	4	FSM	ENSG00000121578.13	ENST00000459778.5	611	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	42.5519290592879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTTCCTACAAATTCC	-119237943	True	NA	NA	False	AATAAA	-25	NA	119240907	119230079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119230245_119236852_119237071_119240360_119240531_119240849
transcript_67929.known	chr3	-	2494	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	51.2150328696247	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	-119237675	False	2964	6	True	AGTAAA	-23	NA	119240639	119211731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
transcript_67931.known	chr3	-	4393	10	FSM	ENSG00000176142.13	ENST00000438581.6	4393	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	72.9032844862897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTTGGCAAGTTAAA	-119461807	True	NA	-3	True	ATTAAA	-19	NA	119463597	119429499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119451208_119451318_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_67940.known	chr3	-	4853	9	FSM	ENSG00000176142.13	ENST00000319172.10	4853	9	0	0	0	0	multi-exon	FALSE	canonical	2	136	junction_1	24.4028686838249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGTCTTGGAAC	-119461825	True	NA	NA	False	AATAAA	-29	NA	119463615	119428948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_67943.nic	chr3	-	2038	9	NIC	ENSG00000176142.13	novel	4853	9	NA	NA	-11	-2232	intron_retention	FALSE	canonical	2	25	junction_8	56.1146983864299	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTGGAATAACTCATT	-119461837	True	NA	-12	True	AGTAAA	-19	NA	119463627	119431731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462105_119463335
transcript_67955.nnic	chr3	-	1878	8	NIC	ENSG00000176142.13	novel	4853	9	NA	NA	0	-2232	intron_retention	FALSE	canonical	2	11	junction_6	64.623872508224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTGGAATAACTCATT	-119461856	True	NA	-12	True	AGTAAA	-19	NA	119463646	119431731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119461961_119462149_119463335
transcript_67963.known	chr3	-	935	5	FSM	ENSG00000176142.13	ENST00000468676.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	64.3947785150318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTCCAGTTTTACC	-119461875	True	NA	NA	False	NA	NA	NA	119463665	119447017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119447173_119452446_119452531_119458017_119458241_119461961_119462105_119463335
transcript_67965.known	chr3	+	2888	12	FSM	ENSG00000163389.12	ENST00000647766.1	2888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.4540330821428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTAGCAATGCACAGGG	119467175	True	NA	NA	False	TTTAAA	-29	NA	119468983	119493825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119478333_119478475_119479907_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_67970.known	chr3	+	1420	11	FSM	ENSG00000163389.12	ENST00000486607.5	1420	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	44.4796582720686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGATATCCTACGGTGA	119467154	True	NA	NA	False	NA	NA	NA	119468962	119492477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119479907_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_67973.nnic	chr3	+	1414	11	NNC	ENSG00000163389.12	novel	3508	11	NA	NA	-4	-386	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	41.3677410550782	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTAAGTTGTATTGCT	119467150	True	NA	NA	False	AATAAA	-28	NA	119468958	119492091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119491762
transcript_67974.known	chr3	+	3508	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	11.8697093477473	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	119467154	True	NA	13	True	AATGAA	-24	NA	119468962	119494708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_67978.nic	chr3	+	1491	7	ISM	ENSG00000163389.12	ENST00000295588.9	3508	11	-4	7086	-4	2265	5prime_fragment	FALSE	canonical	3	133	junction_5	10.85382677011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTATGGGCACTGAA	119467150	True	NA	NA	False	AATAAA	-21	NA	119468958	119487622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832
transcript_67980.known	chr3	+	2379	7	FSM	ENSG00000113845.10	ENST00000494664.6	2379	7	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	49.0773199485601	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGTCAGAGGAAATTAG	119489221	True	NA	NA	False	NA	NA	NA	119498546	119525090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_67981.nnic	chr3	+	1036	7	NNC	ENSG00000113845.10	novel	2379	7	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	213.005216420214	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	119489196	True	NA	9	True	AATAAA	-16	NA	119498521	119524061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_119498589_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_67985.known	chr3	+	725	6	FSM	ENSG00000113845.10	ENST00000492164.5	725	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	235.936940727814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCCCTGAGAAAATTGA	119489249	True	NA	NA	False	NA	NA	NA	119498574	119523630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119498928_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_67995.nic	chr3	+	1056	4	NIC	ENSG00000113845.10	novel	725	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	280.185652737609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	119489192	True	NA	9	True	AATAAA	-16	NA	119498517	119524061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
transcript_67996.nnic	chr3	+	715	4	NNC	ENSG00000113845.10	novel	725	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	288.665896842699	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	119489196	True	NA	9	True	AATAAA	-16	NA	119498521	119524061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_119498591_119513640_119513720_119517204_119517316_119523605
transcript_67997.known	chr3	+	684	3	FSM	ENSG00000113845.10	ENST00000498399.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	119498804	False	NA	9	True	AATAAA	-16	NA	119498816	119524061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119498934_119517204_119517316_119523605
transcript_68001.known	chr3	-	430	4	FSM	ENSG00000138495.7	ENST00000486606.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1546.63010014246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662184	False	NA	-17	True	AGTAAA	-16	NA	119677294	119669531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119669666_119674672_119674789_119675144_119675234_119677203
transcript_68005.known	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	1279.15623231358	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662236	True	NA	-17	True	AGTAAA	-16	NA	119677346	119669531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
transcript_68007.known	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2764	junction_1	276.5	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662296	True	NA	-17	True	AGTAAA	-16	NA	119677406	119669531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119669666_119675144_119675234_119677203
transcript_68008.known	chr3	-	660	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1625.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATGTCAAAAATGCAA	-119662254	True	NA	NA	False	AATAAA	-42	NA	119677364	119674378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119674789_119675144_119675234_119677203
transcript_68009.known	chr3	+	939	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.92574776766556	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	119702858	True	NA	NA	False	AATAAA	-22	NA	119703032	119715934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_68011.known	chr3	-	7743	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	10.8300507847378	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGGTCCTCTTATT	-120092584	True	NA	NA	False	AATAAA	-18	NA	120094447	119821320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_68013.known	chr3	+	982	2	FSM	ENSG00000242622.3	ENST00000469070.1	982	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTGCCCAAATGGG	120094820	True	NA	NA	False	NA	NA	NA	120095269	120099186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120095779_120098713
transcript_68015.nnic	chr3	-	2066	13	NNC	ENSG00000163430.12	novel	5682	11	NA	NA	-181	1944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	459.768623875097	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGGTTTCCTTT	-120451023	False	NA	-12	True	AATAAA	-14	NA	120451174	120394278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_120395057_120395836_120395931_120397195_120397230_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_68017.nnic	chr3	-	2317	13	NNC	ENSG00000163430.12	novel	5682	11	NA	NA	-181	1944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	451.845866972356	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGGTTTCCTTT	-120451023	False	NA	-12	True	AATAAA	-14	NA	120451174	120394278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_120395308_120395836_120395931_120397195_120397230_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_68020.known	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	73.5568487633884	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	-120434936	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_68025.known	chr3	-	482	4	FSM	ENSG00000163430.12	ENST00000467994.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	473.793438348636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACCCCTAATTCAGAGT	-120434924	True	NA	-87	True	AAAAAG	-5	NA	120450980	120438260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120438459_120441267_120441405_120450683_120450747_120450896
transcript_68028.known	chr3	-	540	3	FSM	ENSG00000163430.12	ENST00000472536.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTTATAAGCTTCCT	-120434936	True	NA	NA	False	ATTAAA	-15	NA	120450992	120421171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120421553_120450683_120450747_120450896
transcript_68029.known	chr3	-	677	3	FSM	ENSG00000163430.12	ENST00000485968.5	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	502	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGATGAATCCCTGA	-120434904	True	NA	NA	False	NA	NA	NA	120450960	120423526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120424077_120450683_120450747_120450896
transcript_68032.known	chr3	+	558	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2301	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	120567658	True	NA	27	True	AATAAA	-19	NA	120596356	120602328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120596647_120601110_120601258_120602207
transcript_68034.known	chr3	+	309	2	FSM	ENSG00000065518.8	ENST00000492739.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTAGTAGTTTCTCTT	120567648	True	NA	22	True	AATAAA	-14	NA	120596346	120602323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120596540_120602207
transcript_68035.known	chr3	+	1426	2	FSM	ENSG00000065518.8	ENST00000485064.1	1426	2	0	0	0	0	multi-exon	FALSE	canonical	3	4286	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAGTAGTTTCTCTTT	120567629	True	NA	23	True	AATAAA	-15	NA	120596327	120602324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120596540_120601110
transcript_68037.known	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	10.6291858501362	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	-120739378	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_68042.known	chr3	-	760	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	56.4170974872768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCCTTCAGCCTTACC	-120739382	True	NA	NA	False	NA	NA	NA	120742520	120689714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_68044.nnic	chr3	-	967	7	NNC	ENSG00000144840.10	novel	5605	8	NA	NA	-9070	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	55.8529816174173	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATGACAGTGTACTGCA	-120719454	True	NA	-30	True	AGTAAA	-3	NA	120719616	120689546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120719498
transcript_68048.known	chr3	+	3000	5	FSM	ENSG00000153767.10	ENST00000283875.6	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	31.3169283295792	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	120733986	True	NA	16	True	AATAAA	-16	NA	120742743	120783069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120742795_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_6805.known	chr1	-	1339	6	FSM	ENSG00000143401.15	ENST00000436748.6	1339	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	457.956941207359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTAGGTGATCCAG	-150190380	True	NA	97	True	TATAAA	-35	NA	150236022	150220271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150231776_150231927_150235732
transcript_68050.known	chr3	+	567	2	FSM	ENSG00000153767.10	ENST00000497393.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGATTCATCTAATTT	120734004	True	NA	NA	False	AATAAA	-21	NA	120742761	120751056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120742795_120750522
transcript_68055.nnic	chr3	+	602	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	11	-128809	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	13	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGCATAAAATCGACAT	120907218	True	NA	14	True	AATAAA	-17	NA	120908246	120916637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_68059.known	chr3	-	8757	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	21.6780024616044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATATCAACAATTGTTT	-121542242	True	NA	-12	True	AATAAA	-17	NA	121545988	121431430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_68060.known	chr3	-	1992	14	FSM	ENSG00000180353.11	ENST00000314583.8	1992	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.42804307002418	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGGTAAATAGTACTT	-121660835	True	NA	0	True	AATAAA	-23	NA	121660903	121631398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_68062.nic	chr3	-	1127	6	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-75	26417	0	7233	5prime_fragment	FALSE	canonical	3	42	junction_2	12.3385574521497	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAAATAATTAGGTT	-121742903	True	NA	NA	False	AGTAAA	-7	NA	121749741	121721894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_68063.known	chr3	-	11115	21	NIC	ENSG00000173230.16	novel	10295	22	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	56.4990929130725	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGTGTGTATGTGT	-121749742	False	NA	NA	False	AATAAA	-16	NA	121749767	121663202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730847_121730974_121749631
transcript_68064.nic	chr3	-	544	5	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-75	31534	0	2116	5prime_fragment	FALSE	canonical	3	42	junction_1	12.7549010188241	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAATAGAAAAGATAAAACA	-121742903	True	NA	NA	False	NA	NA	NA	121749741	121727011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_68065.known	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	19.2130907753765	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-121831210	True	NA	0	True	ATTAAA	-18	NA	121835060	121769760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_68068.nnic	chr3	-	2453	14	NIC	ENSG00000173226.17	novel	2577	15	NA	NA	-17	-3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	52.7934458905088	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTACTGTTTCCCTTTT	-121831246	True	NA	-3	True	ATTAAA	-15	NA	121835096	121769763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_121770575_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_68071.nnic	chr3	-	2231	14	NIC	ENSG00000173226.17	novel	2577	15	NA	NA	-17	0	combination_of_known_splicesites	TRUE	canonical	3	18	junction_3	55.5510320314872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-121831246	True	NA	-2	True	AATAAA	-26	NA	121835096	121769993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_121770575_121772556_121772714_121781742_121781875_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_68079.known	chr3	-	1919	12	FSM	ENSG00000173226.17	ENST00000349820.10	1919	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	61.4291233055026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-121831184	True	NA	-2	True	AATAAA	-26	NA	121835034	121769993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_68086.known	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	7.90948797331408	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	121834193	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
transcript_68089.known	chr3	+	829	5	FSM	ENSG00000145088.9	ENST00000490434.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	42.5051467471882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATATGTCTTAACTTT	121834167	True	NA	-49	True	AATAAA	-16	NA	121835182	121886468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_121835392_121844452_121844548_121857010_121857157_121872536_121872789_121886341
transcript_68091.known	chr3	+	5447	22	FSM	ENSG00000163406.11	ENST00000489711.6	5447	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.20147358361364	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGACTGTCACCATT	121894258	True	NA	7	True	ATTAAA	-20	NA	121894400	121944188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121911573_121911667_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
transcript_68098.nnic	chr3	-	883	6	NIC	ENSG00000160124.9	novel	720	5	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	259.286713890242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	-122373338	True	NA	NA	False	ATTAAA	-22	NA	122383263	122359590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122359920_122362967_122363028_122365335_122365467_122368175_122368323_122371674_122371801_122383173
transcript_68100.known	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	250.460575739975	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	-122373302	True	NA	62	True	NA	NA	NA	122383227	122359787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
transcript_68101.known	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	49.4797938556741	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	-122373306	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_68107.known	chr3	-	438	3	FSM	ENSG00000160124.9	ENST00000497726.5	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	238.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGTACATATTTATTT	-122373306	True	NA	NA	False	ATTAAA	-13	NA	122383231	122359599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122359920_122362967_122363028_122383173
transcript_68109.known	chr3	+	801	6	FSM	ENSG00000114023.16	ENST00000232125.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1241.89654963689	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATAAAGTATGATTT	122364595	True	NA	-23	True	ATTAAA	-21	NA	122384175	122409917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122384300_122401375_122401536_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_68111.known	chr3	+	3052	5	FSM	ENSG00000114023.16	ENST00000477892.5	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	2440	junction_1	53.3853912601566	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTACTTTTTATTTTTAA	122364601	True	NA	25	True	AATAAA	-18	NA	122384181	122412334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_68117.known	chr3	-	6888	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_4	17.4172600240555	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAATTCCCTTATG	-122508628	True	NA	44	True	AGTAAA	-21	NA	122514939	122421901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_68118.nic	chr3	-	3025	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	85.9264857115986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	-122508626	True	NA	-25	True	AATAAA	-27	NA	122514937	122425679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514839
transcript_68119.nic	chr3	-	2998	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_13	70.8188789057512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	-122508634	True	NA	-25	True	AATAAA	-27	NA	122514945	122425679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_68125.nic	chr3	-	2310	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	0	-264	combination_of_known_junctions	FALSE	canonical	3	64	junction_13	70.8188789057512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGCCTTCAGTGAATG	-122508634	True	NA	1	True	ATTAAA	-22	NA	122514945	122426367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_6813.known	chr1	-	3054	5	FSM	ENSG00000143401.15	ENST00000629042.2	3054	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	484.378209666785	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAGTGTATAGCATTC	-150190514	True	NA	-3	True	AATAAA	-23	NA	150236156	150218417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229115_150235732
transcript_68135.known	chr3	+	442	2	FSM	ENSG00000272758.7	ENST00000608465.5	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCAGCTTTTTTTTTTT	122416088	True	NA	NA	False	AATAAA	-25	NA	122416224	122421404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122416251_122420988
transcript_68137.known	chr3	+	1271	2	FSM	ENSG00000287207.1	ENST00000659697.1	1271	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTGAGATATTTTTAT	122514969	True	NA	NA	False	AATAAA	-31	NA	122515005	122518172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122515129_122517024
transcript_68140.known	chr3	-	1964	8	FSM	ENSG00000169087.11	ENST00000306103.3	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.13787173112595	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	-122792637	True	NA	-18	True	AATAAA	-17	NA	122793831	122739998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_68142.nnic	chr3	-	1747	7	NIC	ENSG00000169087.11	novel	1964	8	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	22.5585657542515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCATGCCATTCATTT	-122792610	True	NA	-22	True	AATAAA	-13	NA	122793804	122740002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122793616
transcript_68148.known	chr3	-	838	6	FSM	ENSG00000169087.11	ENST00000467643.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	30.4919661550383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCGTTTTCCTCAGT	-122792565	True	NA	NA	False	AGTAAA	-21	NA	122793759	122755323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122755432_122758771_122758854_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_68149.nic	chr3	-	1626	5	ISM	ENSG00000082684.16	ENST00000451055.6	4579	23	63847	0	-20	0	3prime_fragment	FALSE	canonical	3	61	junction_3	7.49583217528247	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTCTGTGCATCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	122912287	122909192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171
transcript_6815.known	chr1	-	1048	5	FSM	ENSG00000143401.15	ENST00000369114.9	1048	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	532.556569765128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATCACTTTTACACAGG	-150190443	True	NA	-23	True	ATTAAA	-2	NA	150236085	150220391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220759_150223185_150223241_150230570_150230694_150231776_150231927_150235732
transcript_68151.known	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	31.3687120193036	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063810	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_68153.known	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_11	93.970917486919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063847	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_68164.known	chr3	+	3401	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	13.6381816969859	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	123200770	True	NA	18	True	TATAAA	-18	NA	123201942	123274136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68167.nic	chr3	+	1532	7	NIC	ENSG00000121542.12	novel	4228	6	NA	NA	-9	264	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	36.7362975210561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATTATTTGCACACTT	123200824	True	NA	7	True	AATAAA	-15	NA	123201996	123272173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_123202135_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68171.nic	chr3	+	871	6	ISM	ENSG00000121542.12	ENST00000492595.6	3401	7	15	14447	-1	-11975	5prime_fragment	FALSE	canonical	3	71	junction_1	14.9318451639441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGCTTCTCTTTTAA	123200785	True	NA	NA	False	AATAAA	-16	NA	123201957	123259689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523
transcript_68173.nnic	chr3	+	1237	6	NIC	ENSG00000121542.12	novel	3401	7	NA	NA	0	264	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	39.4390669260823	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATTATTTGCACACTT	123200770	True	NA	7	True	AATAAA	-15	NA	123201942	123272173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_123201987_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68176.nic	chr3	-	2560	12	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	96303	-634	-1887	0	3prime_fragment	FALSE	canonical	3	26	junction_10	36.6195540051649	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123319810	True	NA	-28	True	AATAAA	-8	NA	123320039	123283943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673
transcript_68177.nnic	chr3	-	2387	11	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3322	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	30.763614872118	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123314601	False	229	-28	True	AATAAA	-8	NA	123314830	123283943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
transcript_68179.nic	chr3	-	2342	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101774	-634	3584	0	3prime_fragment	FALSE	canonical	3	97	junction_8	16.7648957167965	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123313065	True	NA	-28	True	AATAAA	-8	NA	123314568	123283943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_68180.nnic	chr3	-	2415	10	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3177	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	41.1720269414701	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123314746	False	229	-28	True	AATAAA	-8	NA	123314975	123283943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234_123314323_123314539
transcript_68182.nnic	chr3	-	2217	9	NIC	ENSG00000173175.15	novel	3962	23	NA	NA	3592	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	34.1906419945575	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123313057	True	NA	-28	True	AATAAA	-8	NA	123314560	123283943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_68187.nnic	chr3	-	1623	8	NNC	ENSG00000206527.10	novel	4125	7	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	81.524254560423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGTGAGTGCAGTGAT	-123582155	True	NA	-5	True	AATAAA	-32	NA	123585079	123491550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_123492262_123494792_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_68188.known	chr3	-	4125	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	15.1520075677559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCAGTGAGTGCAGT	-123582129	True	NA	-8	True	AATAAA	-29	NA	123585053	123491553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_6819.known	chr1	+	1788	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	55.9486371594519	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150255337	True	NA	15	True	ATTAAA	-15	NA	150257773	150265078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_68194.known	chr3	+	760	3	FSM	ENSG00000239523.7	ENST00000470449.2	779	3	10	9	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	123585232	True	NA	NA	False	AATAAA	-31	NA	123585555	123630821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123585802_123629493_123629682_123630495
transcript_68196.known	chr3	+	677	4	FSM	ENSG00000239523.7	ENST00000664237.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	123585215	True	NA	NA	False	AATAAA	-31	NA	123585538	123630821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123585554_123585646_123585795_123629493_123629682_123630495
transcript_68197.known	chr3	-	3260	12	FSM	ENSG00000175455.16	ENST00000433542.7	3260	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	63.0285256159647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTGTTGTTGGTGAAA	-123956710	True	NA	-3	True	ATTAAA	-17	NA	123961378	123914318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_68199.nic	chr3	-	399	5	ISM	ENSG00000175455.16	ENST00000409697.8	4131	13	-41	42471	2	184	5prime_fragment	FALSE	canonical	3	101	junction_1	33.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGACATGAAAAACATA	-123956602	True	NA	52	True	NA	NA	NA	123961270	123955892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_682.known	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4330	junction_1	571.412868831869	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	6762005	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
transcript_68200.known	chr3	+	2242	7	FSM	ENSG00000114491.14	ENST00000467167.5	2242	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	203.533508024819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725862	True	NA	NA	False	NA	NA	NA	124730444	124744757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124731505_124731605_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_68201.known	chr3	+	6652	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	20.3921553544494	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	124725869	True	NA	30	True	AATAGA	-18	NA	124730451	124749273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_68202.known	chr3	+	2340	6	FSM	ENSG00000114491.14	ENST00000479719.5	2340	6	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_3	164.992848329859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725869	True	NA	NA	False	NA	NA	NA	124730451	124744757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124735092_124735247_124737567_124738444_124740023_124740200_124742151_124742267_124743914
transcript_68206.known	chr3	+	2001	5	FSM	ENSG00000114491.14	ENST00000462091.5	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.688830495828	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725850	True	NA	NA	False	NA	NA	NA	124730432	124744757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_68210.known	chr3	-	439	3	FSM	ENSG00000221955.11	ENST00000481760.2	439	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	22.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTATTTCTT	-125212833	False	NA	NA	False	ATTAAA	-21	NA	125212864	125206667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125206846_125211298_125211395_125212699
transcript_68211.known	chr3	-	9514	9	FSM	ENSG00000163848.20	ENST00000360647.9	9514	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	6.89202437604511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCATTGAGT	-125375310	False	NA	-2	True	AATAAA	-19	NA	125375325	125225668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_68213.known	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	22.9561402461302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	-125374195	True	NA	2	True	NA	NA	NA	125375249	125232075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
transcript_68217.nnic	chr3	-	2612	15	NNC	ENSG00000114520.11	novel	2512	14	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_7	89.2657406230385	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-125515219	True	NA	-7	True	AATAAA	-21	NA	125520206	125446649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125470565_125470662_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_68219.known	chr3	-	2512	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	22.546992347214	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-125515215	True	NA	-7	True	AATAAA	-21	NA	125520202	125446649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_6822.nic	chr1	+	1862	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-159	0	combination_of_known_junctions	TRUE	canonical	3	108	junction_9	96.0971730420134	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150257592	False	NA	15	True	ATTAAA	-15	NA	150257614	150265078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_68221.known	chr3	-	1308	13	FSM	ENSG00000114520.11	ENST00000471751.5	1308	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	71.5333546908946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCACTACCTAGTATAC	-125515194	True	NA	-65	True	AATAAA	-8	NA	125520181	125447710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125520031
transcript_68225.nnic	chr3	+	671	2	NNC	ENSG00000284624.1	novel	1151	2	NA	NA	-60	-67992	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	NA	False	NA	-9	True	AATAAA	-26	NA	125766455	125773298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_125766819_125772990
transcript_68228.known	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	9.43186089804128	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	-125936857	True	NA	-3	True	AATGAA	-18	NA	125937039	125929274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
transcript_68234.known	chr3	-	1245	6	FSM	ENSG00000189366.11	ENST00000692801.1	1404	6	8	151	1	0	multi-exon	FALSE	canonical	0	0	junction_5	28.4787640181241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTTTTCATGTCTGA	-125990529	True	NA	-12	True	AAGAAA	-15	NA	125990565	125928839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125929568_125930556_125930630_125931637_125931756_125932649_125932710_125933574_125933697_125990421
transcript_68235.known	chr3	+	1910	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.9474565306379	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	125916499	True	NA	NA	False	AATAAA	-17	NA	125916619	125930010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_68238.nnic	chr3	-	734	5	NIC	ENSG00000189366.11	novel	805	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	25.7827461687075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTTGGCTCTGATTT	-125936843	True	NA	0	True	AATGAA	-21	NA	125937025	125929271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_125929568_125930556_125930630_125931637_125931753_125933574_125933697_125936897
transcript_6824.nnic	chr1	+	1584	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	133.746397205428	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150255337	True	NA	15	True	ATTAAA	-15	NA	150257773	150265078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150258184_150260150_150260172_150261577_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_68241.known	chr3	-	1797	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	17.2617189801236	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTACTTGACCCT	-126084210	True	NA	-17	True	AATAAA	-5	NA	126084304	126006372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_68242.known	chr3	-	1705	11	FSM	ENSG00000114544.17	ENST00000346785.9	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	22.4341257908571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126084210	True	NA	-1	True	AATAAA	-21	NA	126084304	126006356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_68243.known	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	11.883181392203	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126083140	True	NA	-1	True	AATAAA	-21	NA	126084124	126006356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_68245.nic	chr3	-	2102	10	NIC	ENSG00000114544.17	novel	2182	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	9	junction_8	19.7765292989218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGACCCTTTATGTCTTT	-126084064	False	NA	-7	True	AATAAA	-15	NA	126084158	126006362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_68254.known	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_4	30.1222000985239	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCCTACTCTGC	126696312	True	NA	37	True	AATAAA	-42	NA	126704239	126960420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
transcript_68262.nic	chr3	+	1153	5	ISM	ENSG00000159685.11	ENST00000514908.5	713	7	-48	81902	-45	-81902	5prime_fragment	FALSE	canonical	3	432	junction_4	21.3351236227963	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCTACCACGACTCTTG	126696267	True	NA	NA	False	TTTAAA	-36	NA	126704194	126853270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646
transcript_68265.known	chr3	-	1085	3	FSM	ENSG00000239620.3	ENST00000465482.3	1085	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTTAATGTGCTTATA	-127288035	True	NA	NA	False	AATAAA	-16	NA	127288046	127283782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_127284641_127287313_127287373_127287878
transcript_68268.nnic	chr3	-	1952	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_10	65.8963624072862	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127597927	True	NA	-12	True	AATAAA	-18	NA	127598281	127573068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_68275.nnic	chr3	-	1152	4	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	20	-12331	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	14.142135623731	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597877	True	NA	NA	False	AAAACA	-14	NA	127598231	127592352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127592955_127594799_127594934_127595451_127595691_127598054
transcript_68276.nnic	chr3	-	963	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597927	True	NA	NA	False	AAAACA	-14	NA	127598281	127592352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127592955_127594799_127594934_127598054
transcript_68277.nnic	chr3	-	806	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	2	-12331	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	14	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597911	True	NA	NA	False	AAAACA	-14	NA	127598265	127592352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127592955_127594799_127594934_127598195
transcript_68278.known	chr3	+	3434	16	FSM	ENSG00000073111.14	ENST00000265056.12	3434	16	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	108.83026539831	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTATCTGTTGGCTTC	127581051	True	NA	9	True	AATAAA	-18	NA	127598410	127622436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127598473_127599317_127599548_127604607_127604784_127604895_127605157_127606117_127606338_127606609_127606818_127608381_127608517_127608831_127609024_127615861_127615956_127616867_127617119_127617278_127617406_127617968_127618082_127619026_127619279_127620697_127620881_127621072_127621229_127621662
transcript_68281.known	chr3	+	2175	8	FSM	ENSG00000114631.11	ENST00000342480.7	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_4	29.0073882214268	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	127624178	True	NA	17	True	ATTAAA	-30	NA	127629184	127672802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433_127671614_127672267
transcript_68282.known	chr3	+	1915	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.93699157959252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	127672524	True	NA	11	True	AATAAA	-20	NA	127672957	127680920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_68283.known	chr3	+	1962	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	6.91626421876736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	127672518	True	NA	17	True	AATAAA	-26	NA	127672951	127680926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_68285.known	chr3	-	4941	8	FSM	ENSG00000074416.16	ENST00000265052.10	4271	8	-670	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.92724822331886	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTGTCTGTCCATCA	NA	False	NA	-3	True	AATAAA	-17	NA	127823185	127689065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_68286.known	chr3	+	2205	7	FSM	ENSG00000132394.11	ENST00000254730.11	2205	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	20.7799315580094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	128151572	True	NA	19	True	AATAAA	-26	NA	128153480	128408646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128264616_128264782_128341232_128341890_128358216_128358374_128408068
transcript_68287.nic	chr3	+	2041	6	NIC	ENSG00000132394.11	novel	2205	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	57.5096513639233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	128151571	True	NA	19	True	AATAAA	-26	NA	128153479	128408646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128358216_128358374_128408068
transcript_68290.known	chr3	+	3568	12	FSM	ENSG00000058262.10	ENST00000243253.8	3568	12	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_8	53.6408318631917	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCATGTTCTCTTGAT	128039908	True	NA	22	True	AATAAA	-20	NA	128052436	128071683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475
transcript_683.known	chr1	+	486	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	2079.29908061988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	6762016	True	NA	NA	False	ACTAAA	-2	NA	6785490	6887865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
transcript_68304.known	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_6	75.6198386668472	1431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-128107832	True	NA	NA	False	NA	NA	NA	128123812	128080809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
transcript_68322.known	chr3	-	2284	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	0	0	0	multi-exon	FALSE	canonical	3	1424	junction_5	72.1840924988085	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGTCTGTTGAAGAT	-128617389	True	NA	-21	True	AATAAA	-20	NA	128650818	128619968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
transcript_68329.known	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_5	68.6684789404862	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	128703253	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_68335.known	chr3	+	2122	5	FSM	ENSG00000075785.14	ENST00000674748.1	2122	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	583.810917592331	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	128703253	True	NA	11	True	AATAAA	-18	NA	128726182	128814796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_68338.known	chr3	+	552	3	FSM	ENSG00000075785.14	ENST00000491681.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_2	43	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATCTTTGTCTCACC	128726328	False	NA	NA	False	NA	NA	NA	128726351	128798425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942
transcript_68339.known	chr3	+	1217	6	FSM	ENSG00000075785.14	ENST00000490093.6	1217	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	551.644958283859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGTTAATCTGTGT	128703227	True	NA	-4	True	NA	NA	NA	128726156	128813791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806616_128807554_128807672_128813326
transcript_68341.known	chr3	+	2445	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	20.3178888912342	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	128875774	True	NA	27	True	TATAAA	-24	NA	128879619	128913114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_68343.known	chr3	+	2431	18	FSM	ENSG00000177646.20	ENST00000511227.5	2431	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	51.7675132928553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGAGGTGGGTGGGGA	128875777	True	NA	-73	True	GGGGCT	-17	NA	128879622	128912927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_68347.known	chr3	+	3036	17	FSM	ENSG00000177646.20	ENST00000511325.2	3036	17	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	20.7378541259697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTACTGTTAGCCTTT	128875768	True	NA	13	True	TATAAA	-10	NA	128879613	128913100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128910150_128910740_128910814_128912506
transcript_68349.known	chr3	+	1703	12	FSM	ENSG00000177646.20	ENST00000681552.1	1703	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	69.2498172566733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAACAGCTTGAAAG	128875777	True	NA	-9	True	NA	NA	NA	128879622	128912991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128912506
transcript_68351.known	chr3	-	6034	8	FSM	ENSG00000114656.13	ENST00000265068.9	6034	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	4.77664385637157	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-128993829	True	NA	NA	False	NA	NA	NA	128994115	128966588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128993042_128993337_128993979
transcript_68354.known	chr3	+	2568	18	FSM	ENSG00000177646.20	ENST00000679431.1	2568	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.9040552641052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	128875797	True	NA	15	True	TATAAA	-12	NA	128879642	128913102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128880018_128884674_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_68355.known	chr3	-	1704	12	FSM	ENSG00000240682.10	ENST00000273541.12	1704	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.3942644142356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACGCAACCCACAAGT	-129158730	True	NA	NA	False	NA	NA	NA	129161048	129129373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129137130_129137197_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_68357.known	chr3	-	988	11	FSM	ENSG00000240682.10	ENST00000393292.7	988	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	50.6822454119783	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACACAGGCTGGTGCTGC	-129158719	True	NA	NA	False	NA	NA	NA	129161037	129130016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134827_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_68363.known	chr3	-	4478	3	FSM	ENSG00000172780.17	ENST00000315150.10	4478	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	9	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCGCCCAGGACTGGT	-129121428	True	NA	-10	True	ATTAAA	-18	NA	129121804	129087571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129091347_129094985_129095170_129121285
transcript_68384.known	chr3	-	1623	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2832.97595295124	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGACAGTTTGGACTT	-129109127	True	NA	-9	True	ATTAAA	-21	NA	129183899	129169486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
transcript_68385.known	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	2617.06194997367	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109150	True	NA	-21	True	AATAAA	-27	NA	129183922	129169568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
transcript_68386.known	chr3	-	1516	5	FSM	ENSG00000169714.17	ENST00000500450.6	1516	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2715.1223153847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109138	True	NA	-21	True	AATAAA	-27	NA	129183910	129169568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171654_129171772_129183775
transcript_68387.known	chr3	+	3078	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	0	0	0	0	multi-exon	TRUE	canonical	2	379	junction_5	66.3488517784983	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	129240789	True	NA	26	True	AATAAA	-20	NA	129249605	129277773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_68391.known	chr3	-	1030	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACAGGGATAAGATGGT	NA	False	NA	NA	False	AATAAA	-13	NA	129278782	129277752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129277800_129278800
transcript_68392.known	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	195.255743975832	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	129275392	True	NA	NA	False	AATAAA	-15	NA	129278869	129306186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_68397.nic	chr3	+	1679	7	NIC	ENSG00000183624.14	novel	1763	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	235.795815625864	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	129275412	True	NA	14	True	AATAAA	-25	NA	129278889	129305262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_68399.known	chr3	+	1490	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	231.095131926226	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	129275368	True	NA	45	True	AATAAA	-15	NA	129278845	129305293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_684.known	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2627.00911473274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	6762043	True	NA	15	True	ATTAAA	-23	NA	6785517	6872019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
transcript_68405.nic	chr3	-	658	3	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-48	13388	-14	-92	5prime_fragment	FALSE	canonical	2	19	junction_1	1.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAGAAAGCACG	-129398093	True	NA	NA	False	NA	NA	NA	129399453	129396309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_129396421_129397039_129397141_129399007
transcript_68406.known	chr3	-	498	4	FSM	ENSG00000251474.7	ENST00000506593.1	498	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.04155872120988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTCTGAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	129399655	129396195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129396421_129397039_129397141_129399380_129399496_129399598
transcript_68407.nic	chr3	-	903	2	NIC	ENSG00000251474.7	novel	498	4	NA	NA	-14	-93	intron_retention	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCAGAAAGCAC	-129398093	True	NA	NA	False	NA	NA	NA	129399453	129396310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_129397141_129399380
transcript_68408.known	chr3	+	3841	29	FSM	ENSG00000163913.14	ENST00000347300.6	3841	29	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.4976450697336	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	NA	False	NA	18	True	AATAAA	-18	NA	129440124	129520351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_6841.nic	chr1	-	1635	7	NIC	ENSG00000117362.13	novel	1730	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	158.347367799054	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150265718	True	NA	-21	True	AATAAA	-14	NA	150269057	150265403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150267992_150268697
transcript_68412.known	chr3	-	2470	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	74.6532118586757	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTCCTCTGGCAT	-129434910	True	NA	NA	False	AATAAA	-23	NA	129440009	129430949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_68413.known	chr3	-	2394	8	FSM	ENSG00000129071.10	ENST00000429544.7	2394	8	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_5	35.0934612201214	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTCCTCTGGCATTGT	-129434849	True	NA	NA	False	AATAAA	-26	NA	129439948	129430946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
transcript_68419.known	chr3	-	2099	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	106.566832532071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	-129434908	True	NA	0	True	AATAAA	-29	NA	129440007	129431265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_6842.known	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	77.0528318031783	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150265677	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_68420.nic	chr3	-	2255	8	NIC	ENSG00000129071.10	novel	2099	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	90.3277479007217	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	-129440156	False	NA	0	True	AATAAA	-29	NA	129440181	129431265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
transcript_68424.known	chr3	-	2194	7	FSM	ENSG00000129071.10	ENST00000507208.1	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	80.6322240518985	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGGAAGGTTTGGGC	-129434936	True	NA	NA	False	NA	NA	NA	129440035	129432175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_68428.known	chr3	-	6303	7	FSM	ENSG00000172765.18	ENST00000393238.8	6303	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.7356333046425	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	-129893538	True	NA	-12	True	AATAAA	-16	NA	129893711	129647791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129880308_129880560_129893493
transcript_68430.known	chr3	+	3556	3	FSM	ENSG00000271270.8	ENST00000605830.6	3556	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCAAAAGTTCTACTTT	129893800	False	NA	NA	False	AATAAA	-19	NA	129893810	129908911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129893928_129901706_129901861_129905626
transcript_68433.known	chr3	+	1466	2	FSM	ENSG00000249846.7	ENST00000658712.1	1466	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTGGTATATAGTAAG	130112356	True	NA	13	True	AATACA	-16	NA	130112524	130120566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130112745_130119320
transcript_68434.known	chr3	-	5016	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_16	29.3595534622273	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATCCTAAGAGTTT	-130739048	True	NA	-12	True	ATTAAA	-28	NA	130746829	130678933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_68436.known	chr3	+	4994	28	FSM	ENSG00000017260.20	ENST00000510168.6	4994	28	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	83.2847430355439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130892942	False	NA	17	True	AATAAA	-19	NA	130894083	131003150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_68437.known	chr3	+	4714	27	FSM	ENSG00000017260.20	ENST00000504948.5	4714	27	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	88.0419144397988	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130894093	True	NA	17	True	AATAAA	-19	NA	130894177	131003150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_68438.known	chr3	+	4795	27	FSM	ENSG00000017260.20	ENST00000428331.6	4795	27	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	61.0228519616911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130894512	False	NA	17	True	AATAAA	-19	NA	130894534	131003150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_68440.known	chr3	-	2669	7	FSM	ENSG00000034533.12	ENST00000507978.5	2669	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	23.2050042495627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCTTTTTCTTTAGGAC	-131026572	False	NA	NA	False	AATATA	-40	NA	131026854	131013981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131014388_131016143_131016340_131016989_131017050_131018505_131018717_131024004_131025332_131025473_131025595_131026506
transcript_68442.known	chr3	-	2687	6	FSM	ENSG00000034533.12	ENST00000264992.8	2687	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.6616250863505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGTATTTCTAAATAT	-131026543	True	NA	-5	True	AATAAA	-19	NA	131026825	131013874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131014388_131016143_131016340_131018505_131018717_131024004_131025332_131025473_131025595_131026506
transcript_68443.known	chr3	-	589	3	FSM	ENSG00000034533.12	ENST00000509060.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTGTGGAAGATCATAG	-131026327	False	NA	NA	False	NA	NA	NA	131026609	131025285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131025332_131025473_131025595_131026187
transcript_68446.known	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	95	junction_1	19.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	131360949	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131362069_131362171_131362442_131363355
transcript_68448.known	chr3	+	1706	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	67	0	-18	0	multi-exon	FALSE	canonical	3	134	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	131360963	True	NA	31	True	AATAAA	-28	NA	131361911	131364531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131362442_131363355
transcript_68449.known	chr3	+	6108	3	FSM	ENSG00000198585.12	ENST00000521288.2	6108	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	17	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGGTTCTCACTTAT	131380092	True	NA	38	True	AATAAA	-40	NA	131381773	131388830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131381943_131382045_131382316_131383161
transcript_6845.nnic	chr1	+	634	6	NNC	ENSG00000118292.9	novel	509	6	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	100.867041197807	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	150271064	True	NA	10	True	AATAAA	-16	NA	150272667	150280916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279639_150279742_150280834
transcript_68451.known	chr3	+	1552	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	131380103	True	NA	-10	True	NA	NA	NA	131381784	131383439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131381943_131382045
transcript_68452.known	chr3	-	1457	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	524.267689258074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATTACCACATTAAA	-131476446	True	NA	-49	True	ATTAAA	-8	NA	131502983	131462555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
transcript_68458.known	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	422.012140718227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-131476446	True	NA	-66	True	NA	NA	NA	131502983	131462435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
transcript_68467.known	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_6	101.852592589899	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-131476434	True	NA	-18	True	AATAAA	-14	NA	131502971	131462211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
transcript_68468.known	chr3	-	3749	16	FSM	ENSG00000196353.13	ENST00000429747.6	3749	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	2.37954243967663	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAAGAGTTGTGGTC	-132034680	True	NA	NA	False	AATAAA	-17	NA	132035014	131533568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131535330_131542556_131542794_131549946_131550081_131552439_131552492_131555496_131555552_131564215_131564350_131575070_131575131_131581578_131581666_131587483_131587583_131669674_131669765_131685874_131685959_131696541_131696617_131699908_131699981_131723445_131723626_131905263_131905445_132034566
transcript_68469.known	chr3	+	3174	10	FSM	ENSG00000014257.16	ENST00000336375.10	3174	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.0951973949298	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCTTTGTGTTTGGGGT	132317341	True	NA	NA	False	AATAAA	-24	NA	132317406	132358841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685
transcript_6847.known	chr1	+	509	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	103.150375665821	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	150271186	True	NA	10	True	AATAAA	-16	NA	150272789	150280916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_68470.known	chr3	+	1783	11	FSM	ENSG00000014257.16	ENST00000351273.11	1783	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	3.36005952328229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAGGTTTAATACACA	132317341	True	NA	6	True	AATAAA	-16	NA	132317406	132368298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685_132356856_132367703
transcript_68476.known	chr3	-	3231	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_14	33.8830480008552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-132659113	True	NA	-9	True	ATTAAA	-19	NA	132659809	132558140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_68477.known	chr3	-	3684	19	FSM	ENSG00000240303.8	ENST00000496418.5	3684	19	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_13	34.4093010681705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTGTTTCTCTG	-132659611	False	NA	-6	True	ATTAAA	-22	NA	132659649	132558137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_68482.nnic	chr3	-	2199	13	NNC	ENSG00000240303.8	novel	3231	20	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_12	45.8374998106233	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-132626467	True	NA	-9	True	ATTAAA	-19	NA	132627157	132558140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132627061
transcript_68485.known	chr3	+	4692	12	FSM	ENSG00000081307.15	ENST00000356232.10	4692	12	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	25.9420842558417	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGGTATATTTGT	132654310	True	NA	20	True	ACTAAA	-38	NA	132660328	132679794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132660699_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_6849.known	chr1	-	1718	6	FSM	ENSG00000117362.13	ENST00000414276.6	1718	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.290868899697	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAACTTGGCTTTTAAGG	-150269188	False	NA	-16	True	AATAAA	-19	NA	150269209	150265398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267956_150267992_150268697
transcript_68491.known	chr3	+	2997	12	FSM	ENSG00000081307.15	ENST00000494238.6	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.369983608845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAACTACCAAATGTTT	132654343	True	NA	12	True	AATAAA	-24	NA	132660361	132677782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132661049_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_68498.known	chr3	+	2165	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	35.5494022453262	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	133036722	True	NA	NA	False	AATAAA	-31	NA	133038401	133396228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
transcript_68499.nic	chr3	+	827	5	NIC	ENSG00000144868.14	novel	3727	6	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	57.1707967409936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	133036654	True	NA	NA	False	AATAAA	-31	NA	133038333	133396228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_133038436_133045901_133046021_133229265_133229352_133390179_133390335_133395863
transcript_685.known	chr1	+	863	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	2371.92256759504	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	6761989	True	NA	15	True	AATAAA	-15	NA	6785463	6888201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
transcript_68500.known	chr3	+	955	5	FSM	ENSG00000091527.17	ENST00000431519.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	149.456306323955	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCAGTGATTCACCAC	133572318	False	NA	87	True	NA	NA	NA	133573975	133587418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587158
transcript_68501.known	chr3	-	5596	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.84919816723071	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTCTGTGTTTAAG	-133895867	False	NA	NA	False	AATAAA	-23	NA	133895882	133824234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_68502.known	chr3	+	2576	7	FSM	ENSG00000144867.13	ENST00000678299.1	2576	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	16.4054530229704	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCCTCTCAGCCTCTT	133799205	True	NA	10	True	AATAAA	-32	NA	133805814	133821492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552
transcript_68505.known	chr3	-	3049	15	FSM	ENSG00000163785.13	ENST00000623711.4	3049	15	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_8	49.6228633940905	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTATTGAAATTATTT	-134247720	True	NA	-11	True	ATTAAA	-18	NA	134250859	134157132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191975_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422
transcript_68506.known	chr3	-	4335	10	FSM	ENSG00000114019.15	ENST00000422605.6	4335	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	60.5373061186139	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCTTTGCACAGGTG	-134368124	True	NA	-19	True	ATTAAA	-16	NA	134374447	134355876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
transcript_68509.known	chr3	+	2022	13	FSM	ENSG00000182923.20	ENST00000684574.1	2022	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_12	58.0920605590816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATATTGTAAAGAAAAT	134485449	True	NA	-18	True	NA	NA	NA	134485720	134574990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_68510.known	chr3	+	5293	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	52.1229849064264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134485288	True	NA	NA	False	ATTAAA	-17	NA	134486056	134565031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68511.known	chr3	+	1740	13	FSM	ENSG00000182923.20	ENST00000514678.2	1740	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_12	59.7285526360718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTGCCAAAGCTTC	134485407	False	NA	5	True	AATAAA	-19	NA	134486175	134575013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_68512.known	chr3	+	5045	12	FSM	ENSG00000182923.20	ENST00000682593.1	5045	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	54.2951834157392	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485732	False	NA	NA	False	ATTAAA	-8	NA	134486003	134565022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68513.known	chr3	+	1835	12	FSM	ENSG00000182923.20	ENST00000354446.7	1835	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	49.9727198306509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTATTTTGCCAAAGCT	134485519	False	NA	3	True	AATAAA	-17	NA	134485790	134575011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_68515.known	chr3	+	5149	12	FSM	ENSG00000182923.20	ENST00000682822.1	5149	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	56.3895834704154	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485281	True	NA	NA	False	ATTAAA	-8	NA	134486049	134565022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68516.known	chr3	+	1655	12	FSM	ENSG00000182923.20	ENST00000508778.2	1655	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	63.9921224490733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	134485341	False	NA	-4	True	AATAAA	-10	NA	134486109	134575004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_68517.known	chr3	+	5095	12	FSM	ENSG00000182923.20	ENST00000684492.1	5095	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	60.7517642501362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134486412	False	NA	NA	False	ATTAAA	-8	NA	134486457	134565022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486557_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68523.known	chr3	+	1912	12	FSM	ENSG00000182923.20	ENST00000512894.6	1912	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.2440043415715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	134486154	True	NA	-4	True	AATAAA	-10	NA	134486210	134575004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_68525.known	chr3	+	3753	13	FSM	ENSG00000288700.2	ENST00000683452.1	3753	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	67.7316498314406	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGACTGATGATTGA	134485449	True	NA	NA	False	NA	NA	NA	134485720	134629751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134615183_134615439_134627939
transcript_68526.nnic	chr3	+	936	7	ISM	ENSG00000182923.20	ENST00000513295.2	2987	11	-62	7766	0	6	5prime_fragment	FALSE	canonical	3	48	junction_1	43.7378554572581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAATTGAGGGAATC	134485276	True	NA	NA	False	NA	NA	NA	134486044	134545783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585
transcript_68529.known	chr3	-	1840	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	200.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134486006	False	NA	-2	True	ACTAAA	-19	NA	134486023	134477705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134485319
transcript_6853.known	chr1	-	2353	6	FSM	ENSG00000117362.13	ENST00000360244.8	2353	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	30.2720993655874	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGGGGAACTTGGCT	-150269282	False	NA	-23	True	AATAAA	-12	NA	150269303	150265405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_68530.known	chr3	-	1420	3	FSM	ENSG00000129055.13	ENST00000514612.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	259.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTATGCTGGGTCTTTT	-134483649	True	NA	-7	True	ACTAAA	-14	NA	134485989	134477710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134485700
transcript_68531.known	chr3	-	896	3	FSM	ENSG00000129055.13	ENST00000511751.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGGATAAATTTACAGA	NA	False	NA	NA	False	NA	NA	NA	134486716	134478075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134486586
transcript_68533.known	chr3	-	1170	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	118	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134483645	True	NA	-2	True	ACTAAA	-19	NA	134485985	134477705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134485951
transcript_68536.known	chr3	-	1868	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	11.3137084989848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATAAGTCTCTGTG	-135439180	True	NA	-9	True	AATAAA	-14	NA	135439864	135354795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
transcript_68538.known	chr3	-	1974	4	FSM	ENSG00000240086.7	ENST00000653803.1	1974	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.9705627484771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTTTTCATTGAG	-135439180	True	NA	2	True	AATAAA	-25	NA	135439864	135354784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_135356417_135379261_135379428_135379780_135379848_135439755
transcript_68539.known	chr3	-	867	4	FSM	ENSG00000240086.7	ENST00000459861.6	867	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.556349186104	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTCTTAAACACTTAAG	-135439178	True	NA	NA	False	AATAAA	-16	NA	135439862	135373794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_135374322_135379261_135379428_135379780_135379848_135439755
transcript_6854.known	chr1	+	418	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	62.7176211283559	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271176	True	NA	8	True	AATAAA	-14	NA	150272779	150280914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_68540.known	chr3	-	6062	34	FSM	ENSG00000118007.13	ENST00000383202.7	6062	34	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	11.8496085648639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	-136749069	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_68542.nnic	chr3	-	1557	10	NNC	ENSG00000118007.13	novel	1227	6	NA	NA	2	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3965560102448	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTTATCCTCCATT	-136749092	True	NA	NA	False	AATAAA	-15	NA	136752401	136499703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_136500069_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_68544.known	chr3	-	1304	8	FSM	ENSG00000118007.13	ENST00000480733.1	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	30.5794382030855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCTTTATGTCTGTT	-136749057	True	NA	NA	False	ATTAAA	-18	NA	136752366	136518042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136518416_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_68547.nic	chr3	-	452	3	ISM	ENSG00000118007.13	ENST00000480733.1	1304	8	-88	105126	-51	-105126	5prime_fragment	FALSE	canonical	3	82	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCGTCCTGGCCGGCCT	-136752443	False	NA	NA	False	AAAAAG	-6	NA	136752454	136623168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_136623249_136630869_136630982_136752194
transcript_68553.known	chr3	+	1799	15	FSM	ENSG00000114054.14	ENST00000251654.9	1799	15	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_3	65.7951365983839	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247658	True	NA	17	True	ATTAAA	-14	NA	136250339	136330169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_68554.known	chr3	+	1683	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_11	154.128625297492	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
transcript_68555.known	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	214.675217221012	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_68556.known	chr3	+	1715	14	FSM	ENSG00000114054.14	ENST00000462637.5	1715	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	175.435451471862	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_68557.known	chr3	+	1841	16	FSM	ENSG00000114054.14	ENST00000469217.5	1841	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	221.850339944146	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGCCTTACTGTAAA	136247677	True	NA	18	True	ATTAAA	-15	NA	136250358	136330170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136259175_136259236_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_68558.known	chr3	+	1877	16	FSM	ENSG00000114054.14	ENST00000468777.5	1877	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	221.850339944146	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260262_136260356_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_68559.known	chr3	+	1727	14	FSM	ENSG00000114054.14	ENST00000483687.5	1727	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	178.749667935306	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_6856.nnic	chr1	+	415	5	NNC	ENSG00000118292.9	novel	1251	8	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	102.671807230612	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271068	True	NA	8	True	AATAAA	-14	NA	150272671	150280914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_150272753_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_68560.nnic	chr3	+	1866	7	NIC	ENSG00000174564.13	novel	1787	7	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	4.02768199119819	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAGTTACATTTTCAAC	NA	False	NA	21	True	AATAAA	-33	NA	136969222	137011085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_136969379_136980465_136980593_136982159_136982351_136989440_136989566_136991937_136992089_136995413_136995557_137010112
transcript_68567.nic	chr3	+	1524	5	NIC	ENSG00000158092.7	novel	1937	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	68.8512890220655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	136859853	True	NA	7	True	AATAAA	-21	NA	136862221	136949126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_136862320_136927983_136928228_136945582_136945753_136946151_136946296_136948258
transcript_68575.known	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	18.4451137763426	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	136859839	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
transcript_68577.known	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	54.0637483799347	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	136859839	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
transcript_68580.known	chr3	-	2046	4	FSM	ENSG00000239213.7	ENST00000661609.1	2046	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.8765077873452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAAAATGAGGAACTCTA	-136860035	True	NA	NA	False	AAGAAA	-11	NA	136862031	136835344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136836984_136842230_136842294_136846527_136846587_136861746
transcript_68586.known	chr3	-	827	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	46.7332857821917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTACCTTTTTTTC	-136860053	True	NA	-135	True	GATAAA	-5	NA	136862049	136842190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
transcript_68593.known	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	52.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136861572
transcript_68594.known	chr3	-	1943	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATGGTGGTTCATGCC	-136860058	True	NA	NA	False	AATACA	-32	NA	136862054	136841125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136861614
transcript_68595.known	chr3	-	1818	3	FSM	ENSG00000239213.7	ENST00000461864.7	1860	3	42	0	-4	0	multi-exon	FALSE	canonical	3	90	junction_2	14	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-136860041	True	NA	NA	False	NA	NA	NA	136862037	136841101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136861746
transcript_68600.known	chr3	+	1577	2	FSM	ENSG00000168917.9	ENST00000393079.3	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818773	True	NA	11	True	ATTAAA	-17	NA	136819083	136855888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136819215_136854442
transcript_68602.known	chr3	+	1949	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818815	True	NA	11	True	ATTAAA	-17	NA	136819125	136855888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136819629_136854442
transcript_68603.known	chr3	+	794	2	FSM	ENSG00000158092.7	ENST00000478862.1	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCTCCAAAGTTTTT	136859898	True	NA	NA	False	NA	NA	NA	136862266	136928724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862320_136927983
transcript_68604.known	chr3	+	577	2	FSM	ENSG00000158092.7	ENST00000460960.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTTCTAGCAGGGGCT	136859898	True	NA	NA	False	NA	NA	NA	136862266	136928473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862354_136927983
transcript_68608.known	chr3	-	2662	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	13.6217113612117	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGATTAGTATAACC	-138173646	True	NA	63	True	AATAAA	-42	NA	138174921	138160987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_68611.nnic	chr3	-	2083	7	NIC	ENSG00000138231.13	novel	2662	8	NA	NA	-30	-384	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	32.6087922703883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTGGGTATCTTTTTT	-138173676	True	NA	-6	True	ATTAAA	-15	NA	138174951	138161371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_138162583_138163348_138163495_138163777_138163859_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_68612.known	chr3	-	623	4	FSM	ENSG00000138231.13	ENST00000463982.2	623	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	41.3467720088952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTTAGTAGAGACGG	-138173591	True	NA	NA	False	NA	NA	NA	138174866	138171319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138171469_138171632_138171714_138173501_138173627_138174598
transcript_68614.known	chr3	+	3043	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	94.3357376870435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	40	True	TATAAA	-6	NA	138187266	138296549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_68618.known	chr3	+	4757	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	88.0365055181933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	138186292	True	NA	2	True	AATAAA	-16	NA	138187300	138298373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_6862.nnic	chr1	+	413	4	NIC	ENSG00000118292.9	novel	418	5	NA	NA	-79	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	106.177001066877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271097	True	NA	8	True	AATAAA	-14	NA	150272700	150280914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150272864_150275740_150275800_150276521_150276633_150280834
transcript_68621.known	chr3	+	2777	22	FSM	ENSG00000114098.18	ENST00000491704.5	2777	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	103.268248100564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	138186292	True	NA	93	True	TATAAA	-17	NA	138187300	138296394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_68629.known	chr3	+	2221	21	FSM	ENSG00000114098.18	ENST00000461822.5	2221	21	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	101.946750806487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGGCCAGAATGAATG	138187493	False	NA	-47	True	AATGAA	-43	NA	138187516	138296254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_68630.known	chr3	+	4728	21	FSM	ENSG00000114098.18	ENST00000538260.5	4728	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	95.0191954291342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAGTCTGTTTTCCA	NA	False	NA	13	True	AATAAA	-27	NA	138187247	138298384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_68636.nic	chr3	+	2820	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	53	junction_1	98.1908727937582	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	138186320	True	NA	32	True	AATATA	-41	NA	138187328	138296541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_68638.known	chr3	+	1920	20	FSM	ENSG00000114098.18	ENST00000485396.5	1920	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	103.155075149436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAAGTACAGGAACC	138183908	True	NA	NA	False	NA	NA	NA	138187527	138295933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_68639.known	chr3	+	2910	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	98.0228148046271	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	138183909	True	NA	NA	False	NA	NA	NA	138187528	138246857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_68641.known	chr3	+	3181	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	105.208523102139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTTGTGTGGTAAAG	138186333	True	NA	NA	False	AATAAA	-24	NA	138187341	138246887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_68642.known	chr3	+	1656	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	71.5059958186482	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	138183911	True	NA	7	True	AATAAA	-17	NA	138187530	138245681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_68647.nic	chr3	+	1903	12	ISM	ENSG00000114098.18	ENST00000491704.5	2777	22	-18	50713	16	0	5prime_fragment	FALSE	canonical	3	38	junction_2	118.963220929346	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	7	True	AATAAA	-17	NA	138187282	138245681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_68655.known	chr3	+	1714	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	100.371559716884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	138187326	True	NA	24	True	NA	NA	NA	138187349	138245635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_6866.known	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.0338241524368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_68666.known	chr3	+	4538	6	FSM	ENSG00000158186.13	ENST00000289104.8	4538	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.0678465614699	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	138347696	138405533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138348326_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_68674.known	chr3	-	2028	18	FSM	ENSG00000114107.9	ENST00000474781.5	2028	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	52.9494111242826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	-138594325	False	NA	-15	True	ATTAAA	-19	NA	138594339	138495012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572915_138591853_138591957_138594197
transcript_68675.known	chr3	-	2636	18	FSM	ENSG00000114107.9	ENST00000264982.8	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_16	38.372694299724	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-138589513	True	NA	-3	True	AATAAA	-23	NA	138594260	138494343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_68677.known	chr3	-	1993	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_16	35.3152877685148	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	-138589477	True	NA	-5	True	ATTAAA	-29	NA	138594224	138495002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_6868.known	chr1	+	1179	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.0174904401407	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_68687.nic	chr3	-	2572	17	NIC	ENSG00000114107.9	novel	2636	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	51.5657574728618	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-138589523	True	NA	-3	True	AATAAA	-23	NA	138594270	138494343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_68695.known	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_14	38.1587327998309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-138589501	True	NA	1	True	ATTAAA	-16	NA	138594248	138499883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_68697.nic	chr3	-	2095	16	ISM	ENSG00000114107.9	ENST00000484888.5	1993	18	-30	4881	0	0	5prime_fragment	FALSE	canonical	3	108	junction_14	34.5289572516879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-138589507	True	NA	1	True	ATTAAA	-16	NA	138594254	138499883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_68699.known	chr3	-	1811	14	FSM	ENSG00000114107.9	ENST00000489254.5	1811	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	63.5302658152491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTAGAGTGGAGTT	-138594305	False	NA	NA	False	NA	NA	NA	138594319	138494757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138591853_138591957_138594197
transcript_687.known	chr1	+	538	3	FSM	ENSG00000171735.19	ENST00000490738.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_1	2282.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGAGTGCATTTCC	6761979	True	NA	49	True	AATAAA	-34	NA	6785453	6872053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6825091_6825211_6871756
transcript_6870.known	chr1	+	771	6	FSM	ENSG00000159208.16	ENST00000447007.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20.370567002418	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACAGCATCTCCTGTCA	150281916	True	NA	NA	False	NA	NA	NA	150282542	150286737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282619_150283513_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_68715.known	chr3	-	569	3	FSM	ENSG00000114107.9	ENST00000459695.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGGTAACACTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	138500180	138496909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138497328_138498030_138498111_138500109
transcript_68718.known	chr3	+	946	5	FSM	ENSG00000158234.13	ENST00000393035.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	7.69740215917033	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	138608750	False	NA	NA	False	AATAAA	-15	NA	138608850	138633376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138608938_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_68719.known	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	44.0511066830335	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	138608911	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_68720.known	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_22	29.4654967876868	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	-138829747	True	NA	NA	False	ATTAAA	-17	NA	138834928	138652697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
transcript_68722.known	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	18	junction_1	192.143441316159	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	139344350	True	NA	-91	True	NA	NA	NA	139344564	139357014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_68727.known	chr3	+	1205	8	FSM	ENSG00000175110.14	ENST00000680020.1	1205	8	0	0	0	0	multi-exon	TRUE	canonical	3	448	junction_1	58.8800232919209	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	139338027	True	NA	24	True	ATTAAA	-26	NA	139344019	139357129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_68728.known	chr3	+	1774	7	FSM	ENSG00000175110.14	ENST00000480938.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	57.6293231687557	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATTTCTCTGTTAATA	139338034	False	NA	-54	True	AATACA	-20	NA	139344026	139357051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139351061_139352646_139352793_139355681_139355791_139356918
transcript_68731.known	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_22	227.002603108823	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378136	True	NA	22	True	NA	NA	NA	139389670	139357405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
transcript_68733.nic	chr3	-	3165	22	NIC	ENSG00000184432.11	novel	3489	23	NA	NA	-3	47	combination_of_known_junctions	FALSE	canonical	3	31	junction_21	190.299382225176	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTACTTGTTTCCTTT	-139378109	True	NA	31	True	CATAAA	-15	NA	139389643	139357590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389468
transcript_68734.known	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_21	65.0856404252825	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378113	True	NA	22	True	NA	NA	NA	139389647	139357405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_68737.known	chr3	-	6602	21	FSM	ENSG00000184432.11	ENST00000677309.1	6602	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	199.041201764861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCGTTGCTCTAATT	-139378123	True	NA	0	True	AATAAA	-16	NA	139389657	139353945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_6874.known	chr1	+	2011	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	8.49632273398321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281927	True	NA	24	True	ATTAAA	-21	NA	150282553	150287093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_68742.known	chr3	-	3373	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_20	63.9660065972544	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-16	True	ACTAAA	-18	NA	139389736	139357637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_68745.known	chr3	+	1201	4	FSM	ENSG00000248932.7	ENST00000653359.1	1201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5777619273972	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	139388948	True	NA	NA	False	AATAAA	-18	NA	139389760	139445098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139389934_139419556_139419681_139423015_139423115_139444293
transcript_68749.known	chr3	+	843	3	FSM	ENSG00000248932.7	ENST00000504670.7	852	3	9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	139389002	True	NA	NA	False	AATAAA	-16	NA	139389814	139444604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139390248_139423015_139423115_139444293
transcript_68750.known	chr3	-	516	4	FSM	ENSG00000114115.10	ENST00000619087.4	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	8.65383665716478	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCTCTTTGCACAGCAT	-139535358	True	NA	NA	False	NA	NA	NA	139539587	139517573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139517681_139518420_139518523_139538780_139538960_139539459
transcript_68753.nic	chr3	-	1931	5	NIC	ENSG00000163864.17	novel	2454	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1.87082869338697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-139677630	True	NA	NA	False	AATAAA	-17	NA	139678017	139560190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139677704
transcript_68756.known	chr3	-	873	4	FSM	ENSG00000163864.17	ENST00000511444.5	873	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGAGAGGAAAGGTCTA	-139677355	False	NA	NA	False	NA	NA	NA	139677742	139560841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139561393_139578871_139579056_139637962_139638063_139677704
transcript_68757.known	chr3	-	688	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	-139677617	True	NA	-5	True	AATAAA	-19	NA	139678004	139634359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139634648_139637962_139638063_139677704
transcript_68763.known	chr3	+	1163	8	FSM	ENSG00000114120.14	ENST00000502594.5	1163	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	98.6616564273051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCAAAAGATTACAGT	140935249	True	NA	NA	False	NA	NA	NA	140941894	140976483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966999_140967037_140970926_140970994_140973715_140974006_140976259
transcript_68764.known	chr3	+	5697	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	59.5699868502028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	140935190	True	NA	14	True	AATAAA	-28	NA	140941835	140980995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_68767.nnic	chr3	+	741	5	NNC	ENSG00000114120.14	novel	5697	7	NA	NA	0	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.858589026275	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGAAACCTAGAGGCT	140935190	True	NA	NA	False	ATTAAA	-12	NA	140941835	140963259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_140942096_140952337_140952443_140956526_140956692_140959462_140959541_140963126
transcript_68768.known	chr3	+	3537	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	37.7123616632825	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	140935241	True	NA	NA	False	AATAAA	-22	NA	140941886	140966211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
transcript_68769.nic	chr3	+	555	3	ISM	ENSG00000114120.14	ENST00000507429.5	3537	4	-86	6654	-29	2488	5prime_fragment	FALSE	canonical	3	222	junction_1	40	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAAAGCAAGTTATGG	140935155	True	NA	NA	False	NA	NA	NA	140941800	140959557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_140942096_140956526_140956692_140959462
transcript_68770.known	chr3	+	4638	7	FSM	ENSG00000114120.14	ENST00000446041.6	4638	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	99.6008701434547	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATATGGCTTTTTCTG	140935184	True	NA	9	True	ATTAAA	-10	NA	140941829	140979933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976262
transcript_68773.known	chr3	+	3302	6	FSM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	24.3146046646866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTATCTGTTGGTAA	141230053	True	NA	NA	False	AATAAA	-31	NA	141231824	141294924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_68775.known	chr3	+	3742	9	FSM	ENSG00000155893.13	ENST00000636601.1	3742	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	74.0125622783052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTATGGTGTTTTG	141230012	True	NA	NA	False	AATAAA	-18	NA	141231783	141321722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141305755_141307777_141308203_141308408_141311636_141311757_141321011
transcript_68780.known	chr3	+	479	5	FSM	ENSG00000155893.13	ENST00000505502.1	479	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	11.9451873154003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCACCTGGTTTTGAT	141230110	True	NA	7	True	ATTAAA	-20	NA	141231881	141236389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141235397_141235555_141236271
transcript_68781.nic	chr3	+	2157	19	ISM	ENSG00000155903.14	ENST00000286364.9	5638	24	47	28378	27	6521	5prime_fragment	FALSE	canonical	3	103	junction_2	13.791323985896	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCCTTCAGTGTGCT	141484657	True	NA	7	True	ATTAAA	-20	NA	141487073	141586966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645
transcript_68784.known	chr3	+	862	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	954.695064754535	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	141725507	True	NA	16	True	ATTAAA	-28	NA	141738318	141745517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
transcript_68785.known	chr3	+	2669	3	FSM	ENSG00000114125.14	ENST00000273480.4	2669	3	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_1	216	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTATGTAATTGTT	141725486	True	NA	7	True	CATAAA	-21	NA	141738297	141747560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141738517_141743508_141743557_141745158
transcript_68787.known	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	141725465	True	NA	21	True	AATAAA	-17	NA	141738276	141745700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141738517_141745158
transcript_68788.known	chr3	+	1847	7	FSM	ENSG00000069849.11	ENST00000286371.8	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_5	156.61488505957	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTTTGTGTAAGCAT	141863241	True	NA	39	True	TATAAA	-33	NA	141876642	141926549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141876911_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_68789.nnic	chr3	+	1580	7	NIC	ENSG00000069849.11	novel	569	5	NA	NA	-316	18	combination_of_known_splicesites	FALSE	canonical	2	62	junction_1	721.11428051007	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGGTTCTTTGTAA	141877171	True	NA	22	True	AATAAA	-18	NA	141877212	141926200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_141877563_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_68793.known	chr3	-	2360	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	95.0789145920377	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	-142024093	False	NA	-9	True	AAGAAA	-30	NA	142028665	141951501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_68800.known	chr3	-	1442	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	127.69755936065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	-142024074	True	NA	NA	False	AAGAAA	-6	NA	142028646	141952275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
transcript_68801.nic	chr3	-	1220	10	NIC	ENSG00000114126.18	novel	1201	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	126.494424802727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	-142024054	True	NA	-27	True	AATAAA	-17	NA	142028626	141952495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142028578
transcript_68807.nic	chr3	-	1193	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	128.225813996246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	-142024093	False	NA	-27	True	AATAAA	-17	NA	142028665	141952495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
transcript_68808.known	chr3	-	1403	8	FSM	ENSG00000114126.18	ENST00000477292.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	145.54962685473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCCTTGACGATCGT	-142024054	True	NA	NA	False	NA	NA	NA	142028626	141952142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142028578
transcript_68812.known	chr3	-	746	7	FSM	ENSG00000114126.18	ENST00000478006.5	746	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	145.617936166302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACAAGTGAGTGGAGAA	-142024059	True	NA	NA	False	AATACA	-34	NA	142028631	141963819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142028578
transcript_68819.nic	chr3	-	1574	13	ISM	ENSG00000114127.11	ENST00000392981.7	10079	41	0	110485	0	746	5prime_fragment	FALSE	canonical	3	20	junction_6	5.53524063513854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCTACTAGAGTCTTA	-142444888	True	NA	NA	False	AATAAA	-33	NA	142448037	142417094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_68820.known	chr3	-	2075	12	FSM	ENSG00000114127.11	ENST00000463916.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	5.57740423642835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTTATGTAATTTCT	-142444861	True	NA	NA	False	AATAAA	-41	NA	142448010	142417840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_68825.nic	chr3	+	3807	17	NIC	ENSG00000120756.13	novel	3700	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	144.781395019353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGTGTTTATATTTAT	142591782	True	NA	5	True	AATAAA	-15	NA	142596392	142713659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_142596510_142597236_142597349_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_68827.known	chr3	+	3700	16	FSM	ENSG00000120756.13	ENST00000457734.7	3700	16	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_14	56.9277905186327	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	142591782	True	NA	10	True	AATAAA	-20	NA	142596392	142713664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_68831.nic	chr3	+	1704	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-6	15423	-6	-197	5prime_fragment	FALSE	canonical	3	356	junction_11	43.2526691480393	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTAGTCAGACACTTT	142591776	True	NA	3	True	AATAAA	-18	NA	142596386	142698241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_68832.nic	chr3	+	3815	11	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-42	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_7	16.2015431363806	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	142723145	True	NA	NA	False	AATAAA	-21	NA	142724522	142807888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_142724732_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_68836.nnic	chr3	+	2866	6	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	33.1457387909819	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	142723145	True	NA	NA	False	AATAAA	-21	NA	142724522	142807888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_142724732_142748257_142748461_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_68837.nic	chr3	+	1324	5	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	8.8140512819021	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTCAGACTCTATGG	142723145	True	NA	NA	False	AATACA	-17	NA	142724522	142785287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_142724732_142748257_142748461_142777631_142777764_142780833_142781030_142784703
transcript_68839.known	chr3	-	1896	9	FSM	ENSG00000163710.9	ENST00000295992.8	1896	9	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_6	12.3939249231226	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAACAACCACTAAAC	-142889026	False	NA	NA	False	AATAAA	-15	NA	142889083	142817873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_68840.known	chr3	+	3491	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_9	89.8067884920692	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	142993509	True	NA	24	True	AATAAA	-21	NA	143001620	143056846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_68842.known	chr3	+	7424	28	FSM	ENSG00000163714.18	ENST00000473835.7	7424	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	162.439918195373	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGTTAGGAAAGTTC	142993458	True	NA	NA	False	TTTAAA	-31	NA	143001569	143060725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_68854.known	chr3	+	1580	12	FSM	ENSG00000163714.18	ENST00000461591.5	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_9	120.659619598492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTAGAAAGACCTCCTA	142993498	True	NA	NA	False	NA	NA	NA	143001609	143023395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852
transcript_68855.known	chr3	+	3557	27	FSM	ENSG00000163714.18	ENST00000488497.7	3557	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	206.882169962809	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	143001167	143056500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_68856.known	chr3	+	588	6	FSM	ENSG00000163714.18	ENST00000493782.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_5	45.5833302864106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGATTTGCAGATCAAAA	142993412	True	NA	45	True	AAAAAG	-23	NA	143001523	143016888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_68857.known	chr3	+	438	3	FSM	ENSG00000241570.8	ENST00000607937.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	142964073	True	NA	NA	False	AAGAAA	-45	NA	142964129	142964810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_142964331_142964464_142964637_142964745
transcript_68858.known	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-143001166	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_143000900_143001500
transcript_68859.known	chr3	-	712	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTTATGCAGTA	-143848371	True	NA	NA	False	AATAAA	-16	NA	143848469	143847593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_143847984_143848147
transcript_68860.known	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	71.4202187439199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-146158975	True	NA	-4	True	AATAAA	-14	NA	146161184	146069439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_68863.known	chr3	-	3665	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	29.6045959061331	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTGTTGTTCTATT	-146158958	True	NA	-8	True	AATAAA	-10	NA	146161167	146069443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_68865.known	chr3	-	3233	9	FSM	ENSG00000114698.15	ENST00000354952.7	3233	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.30116263352131	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTATTTTTTGACT	-146250682	True	NA	NA	False	AATAAA	-23	NA	146251105	146192334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250959
transcript_68874.known	chr3	-	1976	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	9.84171605971235	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-146539120	True	NA	-6	True	AATAAA	-18	NA	146544607	146515179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_68880.known	chr3	-	996	8	FSM	ENSG00000188313.13	ENST00000448787.6	996	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	70.7519380278299	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGCTCTGGTTGTATA	-146539133	True	NA	-115	True	NA	NA	NA	146544620	146515954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_68882.known	chr3	-	1443	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	67.8019324268588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACTTCCTTTGAAAA	-146539250	True	NA	23	True	AAAAAG	-25	NA	146544737	146515816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
transcript_6889.known	chr1	+	1085	3	FSM	ENSG00000266472.6	ENST00000614145.5	1085	3	0	0	0	0	multi-exon	FALSE	canonical	3	2125	junction_1	924.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	150272515	True	NA	8	True	AATAAA	-17	NA	150293860	150308979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150293899_150294334_150294450_150308047
transcript_68892.known	chr3	-	581	7	FSM	ENSG00000188313.13	ENST00000488253.5	581	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	102.098672316974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGGTAGTGGATT	-146544512	False	NA	NA	False	NA	NA	NA	146544530	146516058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_68899.known	chr3	-	701	6	FSM	ENSG00000188313.13	ENST00000463777.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	106.702577288461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-146544537	False	NA	-20	True	AAAAAG	-40	NA	146544555	146515801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_6890.known	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3974	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	150272574	True	NA	8	True	AATAAA	-17	NA	150293919	150308979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150294450_150308047
transcript_68901.known	chr3	-	817	6	FSM	ENSG00000188313.13	ENST00000494568.5	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	7.24982758415674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTTGTAGATAGAAATC	-146544560	False	NA	-91	True	NA	NA	NA	146544578	146521716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_68907.known	chr3	-	1257	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	6.94422221866655	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGTTGCACTAAAT	-146539240	True	NA	-4	True	AATAAA	-15	NA	146544727	146527942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
transcript_68909.known	chr3	+	1044	3	FSM	ENSG00000152977.10	ENST00000474034.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAATCATTTAAATTA	147421233	False	NA	NA	False	NA	NA	NA	147421326	147510293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_147421560_147507940_147508053_147509594
transcript_68913.known	chr3	+	1852	5	FSM	ENSG00000242440.2	ENST00000655240.1	1852	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATATCTGAAATGGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	148280914	148401084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_148281110_148288934_148289044_148312110_148312253_148398678_148398777_148399776
transcript_68914.known	chr3	-	3896	26	FSM	ENSG00000071794.16	ENST00000392912.6	3896	26	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	82.3403084764686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGCTAGCATTAGGAGCA	-149075572	True	NA	NA	False	NA	NA	NA	149086504	149030684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149031364_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_68915.known	chr3	-	5306	25	FSM	ENSG00000071794.16	ENST00000465259.5	5306	25	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_13	75.4027956857186	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-149075590	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_68917.nic	chr3	-	1602	13	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-26	28740	-26	-9465	5prime_fragment	FALSE	canonical	3	213	junction_1	66.3153241884726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTTGAAAAAGGGTC	-149075648	True	NA	NA	False	NA	NA	NA	149086580	149059734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_68918.nic	chr3	+	1842	7	NIC	ENSG00000163754.18	novel	1890	7	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	102.665178560644	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	148991338	True	NA	7	True	AATAAA	-16	NA	148991487	149027632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996893_149009275_149009403_149024052_149024273_149026759
transcript_68919.known	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	27.9026084005699	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	148991432	False	NA	7	True	AATAAA	-16	NA	148991451	149027632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
transcript_68920.known	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	117.02888532324	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	148988995	True	NA	6	True	AATAAA	-15	NA	148991557	149027631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
transcript_68921.nic	chr3	-	703	4	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-26	43290	-26	9347	5prime_fragment	FALSE	canonical	3	434	junction_2	1.24721912892465	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAATAGAAAAGCGGT	-149075648	True	NA	NA	False	NA	NA	NA	149086580	149074284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_149074349_149075880_149076048_149084681_149084890_149086316
transcript_68923.known	chr3	+	4611	17	FSM	ENSG00000163755.9	ENST00000296051.7	4611	17	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_10	41.9672025961941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAAAAAGAAATTTTAAG	149120960	True	NA	NA	False	NA	NA	NA	149129637	149173732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_68924.known	chr3	+	2745	16	FSM	ENSG00000163755.9	ENST00000460120.5	2745	16	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	102.20567498921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAAATGCTTTCAGGCT	149120960	True	NA	NA	False	NA	NA	NA	149129637	149172361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_68925.known	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	42.2794933218878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	149121013	True	NA	-18	True	NA	NA	NA	149129690	149154109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_68926.nic	chr3	+	1515	6	ISM	ENSG00000163755.9	ENST00000460120.5	2745	16	-37	18226	-37	0	5prime_fragment	FALSE	canonical	3	56	junction_1	169.996941148951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATCTCTTGTTATTTAT	149120923	True	NA	8	True	AATAAA	-17	NA	149129600	149154135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_68927.known	chr3	-	3727	6	FSM	ENSG00000163762.7	ENST00000296059.7	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	7.2773621594641	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTAATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	149333636	149318497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205_149333400_149333512
transcript_68928.known	chr3	-	907	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.58602010819715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	-149333443	True	NA	NA	False	NA	NA	NA	149333482	149321276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
transcript_68929.known	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.34520787991171	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-149377631	True	NA	NA	False	AATAAA	-14	NA	149377649	149369021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
transcript_6893.nic	chr1	+	2472	17	NIC	ENSG00000117360.13	novel	2414	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_4	121.175734343762	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGATATTTTTCAC	150313053	True	NA	15	True	ATTAAA	-15	NA	150321532	150353195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150321593_150324894_150325088_150325750_150325882_150327556_150327653_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_68930.known	chr3	-	885	6	FSM	ENSG00000114744.9	ENST00000491617.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	303.780447033709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAGGTCATAATCAGAA	-149745914	True	NA	NA	False	GATAAA	-32	NA	149752472	149741389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149741719_149750256_149750383_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_68932.known	chr3	-	632	5	FSM	ENSG00000114744.9	ENST00000483708.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	266.415441556979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAAGAGATGAAGACAAA	-149745892	True	NA	NA	False	NA	NA	NA	149752450	149741574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149741719_149750677_149750852_149751322_149751486_149752209_149752288_149752377
transcript_68934.known	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_1	19.1751792690447	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-149745931	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_68938.known	chr3	-	589	2	FSM	ENSG00000114744.9	ENST00000490008.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTCTCTGGGATTA	-149745931	True	NA	NA	False	AAAAAG	-21	NA	149752489	149751810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149752288_149752377
transcript_68940.known	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	120.542150304364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	149812753	False	NA	-1	True	AATAAA	-12	NA	149812769	149962122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_68943.known	chr3	+	2336	10	FSM	ENSG00000082996.20	ENST00000392894.8	2336	10	0	0	0	0	multi-exon	TRUE	canonical	3	271	junction_3	23.7538820738895	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTACTGTAGTAT	149809922	True	NA	16	True	AATAAA	-29	NA	149813214	149962139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_68945.known	chr3	+	1027	10	FSM	ENSG00000082996.20	ENST00000474348.5	1027	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	74.4427860511798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTGACACAGACAGTA	149809935	True	NA	NA	False	AAAAAG	-23	NA	149813227	149960833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_68954.known	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	100.989789087808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	149809972	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_68956.known	chr3	+	1104	9	FSM	ENSG00000082996.20	ENST00000491086.5	1104	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	117.260393995586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGAAAATGAAATTAATG	149809911	True	NA	NA	False	AATGAA	-18	NA	149813203	149961016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_68960.known	chr3	+	761	8	FSM	ENSG00000082996.20	ENST00000467977.5	761	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	126.82818202238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGCTAACTAAAACCAAAAA	149809922	True	NA	NA	False	NA	NA	NA	149813214	149960765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_68966.known	chr3	-	1780	3	FSM	ENSG00000070087.15	ENST00000452853.6	1780	3	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_1	71	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGGCTCCTGTTGTT	-149955481	True	NA	-5	True	AATAAA	-16	NA	149970950	149964903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149966265_149968357_149968551_149970724
transcript_68967.known	chr3	-	2261	3	FSM	ENSG00000070087.15	ENST00000239940.12	2047	3	-214	0	104	0	multi-exon	FALSE	canonical	3	307	junction_1	371	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGGCTCCTGTTGTT	-149971049	False	NA	-5	True	AATAAA	-16	NA	149971109	149964903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149966587_149968357_149968551_149970724
transcript_68968.known	chr3	-	911	4	FSM	ENSG00000070087.15	ENST00000423691.2	911	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	464.664036338801	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCAAATACTCTAGGCT	-149955453	True	NA	-14	True	AATAAA	-7	NA	149970922	149964912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149965348_149966179_149966265_149968357_149968551_149970724
transcript_68972.known	chr3	+	3879	14	FSM	ENSG00000144895.12	ENST00000460851.6	3879	14	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	81.4929481103486	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTGGTATTTTGTTA	150537575	True	NA	NA	False	AATAAA	-18	NA	150546786	150586016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_6898.known	chr1	+	2414	16	FSM	ENSG00000117360.13	ENST00000324862.7	2414	16	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	54.2121757541606	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTCTACAGGTGATC	150313053	True	NA	53	True	TTTAAA	-39	NA	150321532	150353233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150321593_150324894_150325088_150325750_150325882_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_68982.known	chr3	+	944	7	FSM	ENSG00000198843.14	ENST00000477889.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	393.291417258105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGAAGGCCTGTACTG	150591265	True	NA	NA	False	NA	NA	NA	150603290	150627693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150603500_150618708_150618929_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_68983.known	chr3	+	1010	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	58.5778114988944	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	150537574	True	NA	-36	True	TTTAAA	-14	NA	150546785	150564899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
transcript_68984.known	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	32.873089298087	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	150591295	True	NA	4	True	AATAAA	-16	NA	150603320	150630436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_68985.known	chr3	+	1078	6	FSM	ENSG00000198843.14	ENST00000485923.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	334.527726803026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAGGTAAACATTAC	150591310	True	NA	NA	False	NA	NA	NA	150603335	150627905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150603687_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_68989.known	chr3	-	1596	2	FSM	ENSG00000120742.11	ENST00000490945.1	1596	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATGGAACTAAA	-150602965	True	NA	NA	False	NA	NA	NA	150603228	150565795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_150567107_150602943
transcript_68990.known	chr3	+	2083	14	FSM	ENSG00000144895.12	ENST00000273435.9	2083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	199.121770005042	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	150537582	True	NA	6	True	AATGAA	-21	NA	150546793	150584242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562556_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_68993.nnic	chr3	+	802	4	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	NA	False	NA	21	True	AATAAA	-34	NA	150703476	150720156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
transcript_68996.known	chr3	+	302	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	78	159	78	-7	multi-exon	FALSE	canonical	3	7	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	150703341	False	NA	NA	False	TATAAA	-27	NA	150703563	150719988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150703668_150707931_150708010_150719868
transcript_69000.known	chr3	+	1681	3	FSM	ENSG00000152601.18	ENST00000461436.1	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	15	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAATATGTAATTAAGCA	152267297	True	NA	NA	False	ATTAAA	-6	NA	152268905	152302449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_152269093_152299404_152300368_152301918
transcript_69001.known	chr3	-	6723	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_22	74.5979501505683	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGATTCAGTGAATTT	-154312429	True	NA	NA	False	AATAAA	-39	NA	154324487	154272545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_69004.nic	chr3	-	1407	10	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-111	24878	-40	2295	5prime_fragment	FALSE	canonical	3	234	junction_7	62.7412873298155	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAAGCAATATA	NA	False	NA	NA	False	AATAGA	-10	NA	154324527	154301048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_69005.nic	chr3	-	916	4	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-111	35302	-40	-1677	5prime_fragment	FALSE	canonical	3	234	junction_1	26.1916017074176	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCATAAACAATTTTCCT	NA	False	NA	NA	False	AAAAAG	-9	NA	154324527	154311472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_154311675_154315045_154315281_154316038_154316164_154324173
transcript_69006.known	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	1.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	-154312193	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_154315281_154316038_154316164_154324173
transcript_69008.known	chr3	+	5552	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	13.857673829577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	155079919	False	NA	-18	True	AATACA	-2	NA	155079931	155183678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_69010.known	chr3	+	5656	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	11.1244834590827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079683	True	NA	8	True	AATAAA	-21	NA	155080318	155183704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_69012.known	chr3	+	5744	24	FSM	ENSG00000196549.13	ENST00000615825.2	5744	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	23.3428462019753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079752	True	NA	8	True	AATAAA	-21	NA	155079855	155183704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155156979_155157070_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_69021.nnic	chr3	-	1894	6	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	326.702555851649	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTATCTTGTATTGAA	-155266148	True	NA	NA	False	AAAAAG	-8	NA	155280500	155249171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_69023.nnic	chr3	-	1759	6	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	331.744238834678	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTTATCTTGTATTGA	-155266147	True	NA	NA	False	AAAAAG	-7	NA	155280499	155249172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155249624_155250149_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_69030.nnic	chr3	-	1772	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	352.996104794373	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTATCTTGTATTGAA	-155266147	True	NA	NA	False	AAAAAG	-8	NA	155280499	155249171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69032.nnic	chr3	-	1357	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAATGTAAGTATG	-155280542	False	NA	NA	False	AAAAAG	-9	NA	155280559	155250160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_69034.nnic	chr3	-	1016	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-155266147	True	NA	-4	True	AATAAA	-17	NA	155280499	155250441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_69036.nnic	chr3	-	951	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155266147	True	NA	-25	True	ATTAAA	-28	NA	155280499	155250506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_69038.nnic	chr3	-	1916	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	416.648799616922	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTTTCTTTCAAGACC	-155266147	True	NA	0	True	AATAAA	-21	NA	155280499	155202380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155203787_155258618_155258683_155278366_155278560_155280246
transcript_69042.nnic	chr3	-	1194	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	414.867314799429	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTTAACATGATCTAACA	-155266147	True	NA	-12	True	AATAAA	-16	NA	155280499	155226761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155227446_155258618_155258683_155278366_155278560_155280246
transcript_69046.nnic	chr3	-	1176	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAATGTAAGTATG	-155266147	True	NA	NA	False	AAAAAG	-9	NA	155280499	155250160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69049.nnic	chr3	-	955	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-155280542	False	NA	-4	True	AATAAA	-17	NA	155280559	155250441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69052.nnic	chr3	-	830	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155266147	True	NA	-25	True	ATTAAA	-28	NA	155280499	155250506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69059.nnic	chr3	-	686	3	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	127	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155266196	True	NA	-25	True	ATTAAA	-28	NA	155280548	155250506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155280246
transcript_69061.nnic	chr3	-	3214	3	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_1	395.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGCAGAGTGAAACA	-155266147	True	NA	NA	False	NA	NA	NA	155280499	155255914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155258683_155278366_155278560_155280246
transcript_69063.known	chr3	-	783	3	FSM	ENSG00000240045.2	ENST00000489090.2	783	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGTAAGACTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	155293683	155290226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155290847_155290939_155291039_155293619
transcript_69064.known	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	43.5446769294352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-155851395	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_69065.known	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	27.7704879323357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-155851393	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_69067.known	chr3	-	1804	5	FSM	ENSG00000174928.16	ENST00000534941.2	1804	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	4.15331193145904	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAAAGTAGCTTTTTT	-155805907	True	NA	-11	True	AATAAA	-18	NA	155806272	155762617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155806138
transcript_69072.nnic	chr3	-	1750	4	NIC	ENSG00000174928.16	novel	1811	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	22.7596133534821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAAAGTAGCTTTTTTC	-155805912	True	NA	-10	True	AATAAA	-19	NA	155806277	155762616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_155763919_155767508_155767670_155775700_155775849_155806138
transcript_69074.known	chr3	+	8631	16	FSM	ENSG00000163655.16	ENST00000496455.7	8631	16	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_10	102.65865769627	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGACTTATGTGACTT	155861966	True	NA	4	True	ATTAAA	-17	NA	155870649	155944020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_69080.known	chr3	+	2024	14	FSM	ENSG00000163655.16	ENST00000295920.7	2024	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	263.459101617029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCGTGTGCAGTTTA	155861966	True	NA	-3	True	AATAAA	-15	NA	155870649	155937710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155870898_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_69086.known	chr3	-	4236	5	FSM	ENSG00000114850.7	ENST00000265044.7	4236	5	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_2	75.2641182769054	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCCCTGTTTGATTTCT	-156531870	True	NA	-4	True	AATATA	-16	NA	156555117	156539552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156543270_156544307_156544440_156548904_156549004_156553654_156553782_156554956
transcript_69087.known	chr3	-	807	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	520.651034763209	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACTAGGACGTTT	-156531878	True	NA	-5	True	ATTAAA	-17	NA	156555125	156543003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
transcript_69088.known	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	525.159499580842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-156531902	True	NA	NA	False	NA	NA	NA	156555149	156542820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
transcript_69093.known	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_1	78.8712030253544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-156531870	True	NA	NA	False	NA	NA	NA	156555117	156543953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
transcript_69095.known	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	-156674269	True	NA	NA	False	AATAAA	-17	NA	156674446	156671861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156672131_156674206
transcript_69098.known	chr3	-	2362	13	FSM	ENSG00000163660.12	ENST00000475298.5	2362	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	88.5159668584651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	-157152754	True	NA	-7	True	AATAAA	-24	NA	157160155	157147795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151728_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_69099.known	chr3	-	2457	13	FSM	ENSG00000163660.12	ENST00000631619.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	94.5546211926677	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	NA	False	NA	-7	True	AATAAA	-24	NA	157160363	157147795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
transcript_691.known	chr1	+	8314	23	FSM	ENSG00000171735.19	ENST00000303635.12	8314	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1277.55304914842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGTGTGTGTTTTGCTTT	6761979	True	NA	18	True	ATTAAA	-22	NA	6785453	7769706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_7091303_7091372_7249490_7249627_7467829_7467902_7640399_7640554_7661725_7661867_7663352_7665200_7670910_7671038_7677598_7677734_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7737958_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7755637_7755669_7766458
transcript_69104.nic	chr3	-	2239	13	NIC	ENSG00000163660.12	novel	2457	13	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	87.2777733573802	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	NA	False	NA	-7	True	AATAAA	-24	NA	157160220	157147795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_69111.nic	chr3	-	2282	12	NIC	ENSG00000163660.12	novel	2362	13	NA	NA	-42	56	combination_of_known_junctions	FALSE	canonical	3	83	junction_8	55.3587846806838	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTACTGGTTTTCTGA	NA	False	NA	-4	True	AATAAA	-31	NA	157160220	157147738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_69118.known	chr3	-	1998	11	FSM	ENSG00000163660.12	ENST00000461804.5	1998	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72.245484287947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATGTCCCTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	157160760	157146507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157146608_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_69119.known	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	34.9651254824003	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-157152746	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_6912.known	chr1	+	1043	3	FSM	ENSG00000163125.16	ENST00000369067.7	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGTATTTTTAAGCC	150363045	True	NA	NA	False	TTTAAA	-45	NA	150364707	150441623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150364920_150417595_150417726_150440922
transcript_6913.known	chr1	+	2727	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_8	43.8782524499584	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485462	True	NA	15	True	AATAAA	-29	NA	150487418	150507602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_69135.nic	chr3	-	1357	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	-205	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	11.2333209693305	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	-157499718	False	NA	-2	True	AATGAA	-29	NA	157499760	157459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69138.nic	chr3	-	1410	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	4015	103	-4	0	3prime_fragment	FALSE	canonical	3	32	junction_2	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	-157498709	True	NA	-2	True	AATGAA	-29	NA	157499559	157459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69141.known	chr3	+	850	4	FSM	ENSG00000174899.13	ENST00000650979.1	850	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.37987005998436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATTAACACATCTTAG	157543136	True	NA	NA	False	GATAAA	-31	NA	157543376	157578754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157578278
transcript_69142.known	chr3	+	883	3	FSM	ENSG00000174899.13	ENST00000468043.6	920	3	32	5	4	-5	multi-exon	FALSE	canonical	2	7	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGTTGAATTCCTTTT	157543103	True	NA	NA	False	AATAAA	-26	NA	157543343	157569912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_157543510_157553229_157553341_157569306
transcript_69148.known	chr3	+	2597	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	11.842588972866	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	158107234	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_6915.nnic	chr1	+	2599	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	80.2495862528275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485443	True	NA	15	True	AATAAA	-29	NA	150487399	150507602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_69151.known	chr3	+	1607	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.6032012894673	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	158107222	True	NA	-89	True	AATAAA	-3	NA	158110076	158544734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
transcript_69153.nic	chr3	+	1467	10	NIC	ENSG00000174891.14	novel	2746	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	21.8908628551551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCTGTTAAAATGAATG	158110380	False	NA	NA	False	AATAAA	-13	NA	158110391	158544522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_69154.nic	chr3	+	1862	8	NIC	ENSG00000174891.14	novel	1148	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	32.9142361110737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	158107218	True	NA	NA	False	NA	NA	NA	158110072	158461983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158225656_158225734_158298038_158298076_158354856_158354909_158460934
transcript_69157.known	chr3	+	769	7	FSM	ENSG00000174891.14	ENST00000471994.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	14.2058282249067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAGGAAGAAG	158107213	True	NA	NA	False	NA	NA	NA	158110067	158460962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_69160.known	chr3	+	1757	7	FSM	ENSG00000174891.14	ENST00000684683.1	1757	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11.6571389666971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	158107234	True	NA	NA	False	NA	NA	NA	158110088	158461983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_69164.known	chr3	+	1069	4	FSM	ENSG00000174891.14	ENST00000684156.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.8174071805952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTGTTTAAGCCTT	158107234	True	NA	NA	False	TATAAA	-29	NA	158110088	158203695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071
transcript_69166.known	chr3	+	1247	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	231.673063093803	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566951	True	NA	15	True	AATAAA	-18	NA	158571172	158605397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69171.known	chr3	+	2168	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	41.6949903732118	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566972	True	NA	4	True	AATAAA	-16	NA	158571193	158606456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69174.known	chr3	+	2222	7	FSM	ENSG00000178053.20	ENST00000359117.9	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	154.502067587747	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566962	True	NA	4	True	AATAAA	-16	NA	158571183	158606456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69176.known	chr3	+	1937	6	FSM	ENSG00000178053.20	ENST00000650753.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	199.188955517117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATACTTCTCTAATTT	158566972	True	NA	-94	True	AGTAAA	-13	NA	158571193	158606358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158605096
transcript_69177.known	chr3	+	1959	6	FSM	ENSG00000178053.20	ENST00000619577.5	1959	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	200.44809802041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACTATGTTCATACT	158566969	True	NA	NA	False	AGTAAA	-3	NA	158571190	158606348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571392_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69178.known	chr3	+	992	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	203.224014329016	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566941	True	NA	15	True	AATAAA	-18	NA	158571162	158605397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_6918.known	chr1	+	2162	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	73.0836963122875	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCAGGCGCAGTGGCT	150485463	True	NA	NA	False	AATAAA	-1	NA	150487419	150507284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_69180.known	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.371725749085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	158637361	True	NA	12	True	AATAAA	-13	NA	158644596	158692569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_69182.known	chr3	+	6478	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.9306142505249	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGGATTATGGATGT	158637291	True	NA	17	True	AATAAA	-30	NA	158644526	158695581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_69189.known	chr3	-	1071	6	FSM	ENSG00000079257.8	ENST00000264265.4	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	11.3030969207558	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATTACGTTGCA	-158671946	True	NA	-1	True	AATAAA	-21	NA	158672648	158666413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_158666745_158667011_158667075_158668995_158669133_158669432_158669611_158670956_158671020_158672349
transcript_69190.known	chr3	+	1594	16	FSM	ENSG00000118855.21	ENST00000264266.12	1594	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	8.67691701521277	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAAGTGTATTTGTG	158801049	True	NA	NA	False	AATATA	-3	NA	158802090	158829116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158802316_158804318_158804372_158805361_158805475_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_69192.known	chr3	+	1645	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	25.9293913027925	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	NA	False	NA	12	True	AATAAA	-20	NA	159839860	159897360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_69196.known	chr3	+	1000	4	FSM	ENSG00000151967.18	ENST00000495954.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	62.9567752950829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGAATGTTGACTAC	159839796	True	NA	NA	False	NA	NA	NA	159839939	159897234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_159840215_159866162_159866282_159892096_159892191_159896722
transcript_69197.known	chr3	+	1444	7	FSM	ENSG00000168811.7	ENST00000305579.7	1444	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.70782512765993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAATTTTTCTAATGT	159988755	True	NA	NA	False	AATAAA	-19	NA	159988834	159996019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_159989175_159990166_159990313_159993011_159993126_159993450_159993493_159993567_159993610_159993700_159993845_159995403
transcript_69198.known	chr3	-	3073	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_19	26.4988679003462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACCATTAATTTC	-160399110	False	NA	-3	True	AATAAA	-19	NA	160399273	160258179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_692.known	chr1	-	1721	1	FSM	ENSG00000270171.1	ENST00000602640.1	1721	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGTCTTGGCTATGT	-7694776	False	NA	NA	False	ATTAAA	-18	NA	7694844	7693123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_7693100_7694800
transcript_69201.known	chr3	-	3999	20	FSM	ENSG00000068885.15	ENST00000326448.12	3999	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.5762353025681	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-160398006	True	NA	-2	True	AATAAA	-33	NA	160399225	160256985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_69205.nic	chr3	-	3715	18	NIC	ENSG00000068885.15	novel	4044	19	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	27.3097065016113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTCTCTCATATCCT	-160398033	True	NA	-8	True	AATAAA	-27	NA	160399252	160256991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160399145
transcript_69209.nic	chr3	-	1855	14	NIC	ENSG00000068885.15	novel	860	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.215808598142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGAGTTGTCTATGC	-160398004	True	NA	-8	True	AATAAA	-24	NA	160399223	160299078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_69214.nic	chr3	-	1637	13	NIC	ENSG00000068885.15	novel	860	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	36.0542608053781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGAGTTGTCTATGC	-160398006	True	NA	-8	True	AATAAA	-24	NA	160399225	160299078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_69219.known	chr3	-	554	4	FSM	ENSG00000068885.15	ENST00000483325.1	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	52.3725967361643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGAGTTGTCTATGC	NA	False	NA	-8	True	AATAAA	-24	NA	160307781	160299078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662
transcript_69227.nnic	chr3	+	734	6	NIC	ENSG00000113810.16	novel	1971	14	NA	NA	-2	-66	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	141.164584793779	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAAGAAAAAAAATT	160394132	True	NA	28	True	AATGAA	-37	NA	160399635	160416337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_160399698_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250
transcript_69235.known	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	-160449581	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449444
transcript_69236.known	chr3	-	3824	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-160444730	True	NA	-2	True	AATAAA	-18	NA	160449786	160435502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_69237.known	chr3	-	860	3	FSM	ENSG00000213186.8	ENST00000479460.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCGATAAGGAAGCTG	-160449693	False	NA	40	True	NA	NA	NA	160449725	160438650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449471
transcript_69244.known	chr3	-	603	3	FSM	ENSG00000213186.8	ENST00000496222.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGACACACACTGGAC	-160444704	True	NA	-40	True	AAGAAA	-30	NA	160449760	160438730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449683
transcript_69251.nic	chr3	+	2992	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	98.6713061972257	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	NA	False	NA	31	True	AATAAA	-32	NA	161221268	161252307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_69254.known	chr3	+	3028	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	42.8908692691891	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	161216001	True	NA	31	True	AATAAA	-32	NA	161221310	161252307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_69261.known	chr3	+	600	6	FSM	ENSG00000169251.13	ENST00000473909.5	600	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	157.410800137729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATAACTTTTCCTTC	161215978	True	NA	NA	False	NA	NA	NA	161221287	161234905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_69263.nic	chr3	+	1110	6	ISM	ENSG00000169251.13	ENST00000351193.7	3028	16	-14	16961	9	15	intron_retention	FALSE	canonical	3	307	junction_1	50.2529601118183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTAATTCTTTATCTGC	161215987	True	NA	NA	False	NA	NA	NA	161221296	161235346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_69264.known	chr3	-	552	6	FSM	ENSG00000169255.15	ENST00000484127.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	19.4668949758301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATAGAACGCGTGAAC	-161104742	False	NA	NA	False	NA	NA	NA	161105261	161086630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
transcript_69265.known	chr3	-	3058	5	FSM	ENSG00000169255.15	ENST00000652377.1	3058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	21.3834047803431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTACAGTTATGTACTG	-161104626	False	NA	NA	False	NA	NA	NA	161105145	161084147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161105002
transcript_69267.known	chr3	-	3295	5	FSM	ENSG00000169255.15	ENST00000320474.10	3295	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	6.37867541108654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTTCTATTCCTAC	-161104830	True	NA	0	True	AATAAA	-32	NA	161105349	161083882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161105234
transcript_69269.known	chr3	-	3221	4	FSM	ENSG00000169255.15	ENST00000392779.6	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.9387952383176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTTCTATTCCTAC	-161104851	True	NA	0	True	AATAAA	-32	NA	161105370	161083882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161103426_161103518_161104318_161104407_161105234
transcript_6927.known	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	27	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-150573993	True	NA	NA	False	AATAAA	-14	NA	150579610	150574557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150577492_150578243_150578492_150578842
transcript_69271.known	chr3	-	880	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5784881201135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAACAGACCTACCAGAA	-161371485	False	NA	NA	False	AATAGA	-2	NA	161371501	161345774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
transcript_69272.known	chr3	-	3103	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_1	51.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTTACTTTTTAT	-161372835	True	NA	NA	False	AATAAA	-25	NA	161372880	161344791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161346356_161359801_161359895_161371434
transcript_69273.known	chr3	-	679	2	FSM	ENSG00000196542.9	ENST00000497374.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGCATTTAATTA	-161371501	False	NA	NA	False	AATATA	-3	NA	161371517	161359298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161359895_161371434
transcript_69274.known	chr3	-	471	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	-161429557	True	NA	-66	True	NA	NA	NA	161429597	161429126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161429100_161429600
transcript_69279.known	chr3	-	2405	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTTTGTTTTTTAT	-165837213	True	NA	NA	False	ATTAAA	-18	NA	165837423	165772903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
transcript_69283.known	chr3	-	849	9	FSM	ENSG00000114209.15	ENST00000475915.6	849	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	555.484346651641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTCAGACCTTCAAAA	-167734467	False	NA	NA	False	AATAAA	-43	NA	167734510	167684338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734458
transcript_69284.known	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_8	471.3283754454	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	-167734896	False	NA	-10	True	AATAAA	-15	NA	167734939	167683909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
transcript_69285.known	chr3	-	1026	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	611.938671355227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAATTTTAAAGTT	-167719863	True	NA	NA	False	NA	NA	NA	167734892	167684255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
transcript_69293.known	chr3	-	934	8	FSM	ENSG00000114209.15	ENST00000461494.5	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	505.19634493806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-167734501	False	NA	NA	False	NA	NA	NA	167734544	167684241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734431
transcript_69295.known	chr3	-	1276	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_7	124.925120429342	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACATTTCTTTACTTG	-167734887	False	NA	-12	True	AATAAA	-13	NA	167734930	167683911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
transcript_69305.known	chr3	+	1907	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.4386652174174	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGATCTATTTTTTTA	167735039	True	NA	17	True	AATAAA	-18	NA	167735722	167825566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_69306.known	chr3	+	1600	9	FSM	ENSG00000163536.13	ENST00000446050.7	1600	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	7.51560875777871	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTATTTTTTTATTT	167735037	True	NA	20	True	AATAAA	-21	NA	167735720	167825569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_167735824_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_69307.nic	chr3	+	1582	9	NIC	ENSG00000163536.13	novel	1600	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.4386652174174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGACTAGATCTATTTT	167735037	True	NA	13	True	AATAAA	-14	NA	167735720	167825562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_167735813_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_69309.nnic	chr3	-	170	2	Genic_Genomic	ENSG00000213178.3	novel	410	1	NA	NA	191	57	multi-exon	FALSE	canonical	3	201	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	169483889	169483613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr3_-_169483710_169483815
transcript_69310.known	chr3	-	410	1	FSM	ENSG00000213178.3	ENST00000418623.1	410	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATTTATCTGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	169484080	169483670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169483700_169484100
transcript_69311.known	chr3	-	438	1	FSM	ENSG00000277925.1	ENST00000363312.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGCTTTCCTGTTGGTG	-169759762	True	NA	-4	True	NA	NA	NA	169765047	169764609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169764600_169765000
transcript_69312.known	chr3	-	1671	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATGTATGTATT	-169769316	True	NA	-12	True	AATAGA	-19	NA	169769561	169766920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169768351_169769320
transcript_69318.known	chr3	+	4969	8	FSM	ENSG00000085274.16	ENST00000349841.10	4969	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	53.3819506299763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCTCAGCCTC	169771419	True	NA	NA	False	NA	NA	NA	169773395	169789716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69322.known	chr3	+	2630	8	FSM	ENSG00000085274.16	ENST00000602751.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	83.1794224945726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTCCTGTTATGCACT	169771428	True	NA	-42	True	NA	NA	NA	169773404	169787502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169773463_169774264_169774562_169778883_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69326.nnic	chr3	+	1952	7	NIC	ENSG00000085274.16	novel	4969	8	NA	NA	-13	-732	combination_of_known_splicesites	TRUE	canonical	3	59	junction_5	81.9654398715296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGACCATTATTTTTCA	169771406	True	NA	3	True	ATTAAA	-16	NA	169773382	169786770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169784621_169784709_169786415
transcript_69327.nnic	chr3	+	1996	7	NIC	ENSG00000085274.16	novel	4969	8	NA	NA	-1	-676	combination_of_known_splicesites	FALSE	canonical	3	59	junction_5	81.9654398715296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAATGTTTGTTTTTATT	169771418	True	NA	19	True	AGTAAA	-23	NA	169773394	169786826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169784621_169784709_169786415
transcript_69329.known	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	75.7585597473975	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	169771450	True	NA	0	True	AATAAA	-11	NA	169773426	169787544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69330.known	chr3	-	1781	11	FSM	ENSG00000171757.17	ENST00000522830.5	1781	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	12.8918578955867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-169812576	True	NA	5	True	ATTAAA	-28	NA	169812932	169793472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_69331.known	chr3	-	1475	9	FSM	ENSG00000171757.17	ENST00000522080.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	6.24374687187109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATCTAATTAGAAAACTAA	-169812169	False	NA	NA	False	TATAAA	-45	NA	169812525	169795779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
transcript_69332.known	chr3	-	3787	9	FSM	ENSG00000171757.17	ENST00000522596.6	3787	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	8.70972875582242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-169812334	False	356	5	True	ATTAAA	-28	NA	169812690	169793472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_69336.known	chr3	+	1430	9	FSM	ENSG00000008952.17	ENST00000480708.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_8	424.6282933343	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGATATTTCT	169952886	True	NA	20	True	AATAAA	-21	NA	169966807	169993831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593_169993102_169993654
transcript_6934.known	chr1	-	716	5	FSM	ENSG00000143420.19	ENST00000509582.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	558.634272131598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGGCTGGAGAGGCAGA	-150629370	False	NA	NA	False	NA	NA	NA	150629502	150622728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627311_150627593_150629413
transcript_69348.known	chr3	+	6526	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_4	197.339963576793	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	169952885	True	NA	6	True	AATAAA	-22	NA	169966806	169998373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
transcript_69358.nic	chr3	+	440	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-39	3026	-14	0	5prime_fragment	FALSE	canonical	3	1345	junction_3	98.8005847935909	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAGAAAA	169952865	True	NA	67	True	TATAAA	-13	NA	169966786	169982859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_6936.known	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	334.023951237033	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	-150628996	False	38469	NA	False	NA	NA	NA	150629128	150622543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
transcript_69360.known	chr3	-	1738	2	FSM	ENSG00000239219.2	ENST00000469301.1	1738	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTTTTCCAGTTATTT	-169966696	True	NA	NA	False	AATAAA	-18	NA	169966734	169954226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169955208_169965977
transcript_69361.known	chr3	+	508	5	FSM	ENSG00000008952.17	ENST00000487736.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	726.11466036708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAGAGAA	169952892	True	NA	65	True	TATAAA	-11	NA	169966813	169982857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169966859_169969286_169969384_169975607_169975717_169976945_169977052_169982706
transcript_69364.known	chr3	+	4887	18	FSM	ENSG00000163558.13	ENST00000295797.5	4887	18	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_14	59.8813706148482	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	170209102	True	NA	54	True	AATAAA	-15	NA	170222423	170305977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170222771_170235229_170235352_170259968_170260059_170263378_170263430_170267914_170268001_170270420_170270562_170273285_170273341_170275228_170275288_170280226_170280404_170281165_170281264_170281881_170281969_170284460_170284597_170291853_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
transcript_69369.known	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.2987477417232	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	170346520	True	NA	19	True	AATAAA	-21	NA	170357714	170396835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
transcript_6937.known	chr1	-	633	5	FSM	ENSG00000143420.19	ENST00000339643.9	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	550.55489054226	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGGCTGGAGAGGCA	-150591107	True	NA	NA	False	NA	NA	NA	150629576	150622730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629413
transcript_69373.known	chr3	+	594	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGAGTAAGTTACG	170346490	True	NA	NA	False	GGGGCT	-11	NA	170357684	170360213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170357764_170359698
transcript_69374.known	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	170355851	True	NA	NA	False	NA	NA	NA	170358508	170360160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170358646_170359698
transcript_69375.known	chr3	+	2758	3	FSM	ENSG00000013297.12	ENST00000064724.8	2758	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAATTGGCAAACATTTC	170418322	True	NA	NA	False	AATAAA	-26	NA	170418867	170434691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170419293_170423162_170423328_170432523
transcript_69377.known	chr3	-	545	4	FSM	ENSG00000163584.18	ENST00000466674.5	545	4	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	456.754736033343	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	-170870015	False	NA	-13	True	AATAAA	-19	NA	170870033	170866263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170869964
transcript_69379.known	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	438.221658778092	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-170861611	True	NA	-17	True	AATAAA	-15	NA	170870195	170866267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
transcript_69380.known	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	473.360562597078	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	-170861624	True	NA	-16	True	AATAAA	-16	NA	170870208	170866266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
transcript_69381.known	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	11.5542200082913	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	-170907750	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
transcript_69386.nnic	chr3	+	1113	3	Fusion	ENSG00000240497.3_ENSG00000279673.1	novel	229	2	NA	NA	-66	3	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTGTTTTTATTTCT	171460191	True	NA	10	True	AATAAA	-13	NA	171460545	171469705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_+_171461358_171468083_171468256_171469576
transcript_69387.nnic	chr3	+	573	3	Fusion	ENSG00000240497.3_ENSG00000279673.1	novel	229	2	NA	NA	332	3	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTGTTTTTATTTCT	171460846	True	NA	10	True	AATAAA	-13	NA	171460943	171469705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_+_171461216_171468083_171468256_171469576
transcript_69388.known	chr3	+	946	4	FSM	ENSG00000075420.13	ENST00000421757.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.6483838619908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCTTCTTATTCAT	172034793	True	NA	NA	False	AATAAA	-27	NA	172039627	172187298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172186711
transcript_69389.known	chr3	+	408	4	FSM	ENSG00000075420.13	ENST00000423424.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	54.1356321350981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTTTTCAATGTCT	172039864	True	NA	NA	False	NA	NA	NA	172040554	172186834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172186711
transcript_69390.nic	chr3	+	1839	3	ISM	ENSG00000075420.13	ENST00000421757.5	946	4	-22	52294	-22	-51830	5prime_fragment	FALSE	canonical	3	105	junction_1	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	172034771	True	NA	NA	False	ATTAAA	-45	NA	172039605	172135004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_172039772_172112451_172112591_172133470
transcript_69391.nic	chr3	+	1768	3	ISM	ENSG00000075420.13	ENST00000423424.5	408	4	-25	51830	-24	-51830	5prime_fragment	FALSE	canonical	3	31	junction_1	53	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	172039839	True	NA	NA	False	ATTAAA	-45	NA	172040529	172135004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_172040625_172112451_172112591_172133470
transcript_69392.nic	chr3	+	4427	26	NIC	ENSG00000114346.14	novel	4136	25	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_25	116.390405102826	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	172736379	True	NA	17	True	AATAAA	-19	NA	172750700	172821473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172818547_172818815_172820147
transcript_69394.known	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_4	49.0439145619062	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736404	True	NA	18	True	AATAAA	-20	NA	172750725	172821474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_69397.known	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	82.8753590747994	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736360	True	NA	18	True	AATAAA	-20	NA	172750681	172821474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_694.known	chr1	+	2178	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	14.6009417504488	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	7767577	True	NA	12	True	AATAAA	-17	NA	7771295	7781432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_69401.nnic	chr3	-	1472	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227312	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGCATGTGCTCATAA	-173161046	True	NA	NA	False	ATTAAA	-16	NA	173161232	173116674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_69402.nnic	chr3	-	1213	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227571	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	0.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGTGTGCACTTGAT	-173161046	True	NA	0	True	AATAAA	-22	NA	173161232	173116933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_69408.known	chr3	-	2535	17	FSM	ENSG00000177565.18	ENST00000422442.6	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	77.9350691280889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATGTTGTGGAAGGG	-177194313	True	NA	-124	True	NA	NA	NA	177197227	177024854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177098465_177098542_177197120
transcript_69409.known	chr3	-	7948	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	58.0861429258304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAATTACTAATGTTT	-177196454	False	2914	-10	True	ATTAAA	-24	NA	177196478	177019354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
transcript_69410.known	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	46.5403051128804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-177197160	True	NA	1	True	ATTAAA	-35	NA	177197482	177019343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
transcript_69418.nic	chr3	-	498	3	ISM	ENSG00000237978.6	ENST00000425330.1	508	4	-40	674	-40	25	5prime_fragment	FALSE	canonical	1	1	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859341	True	NA	-5	True	NA	NA	NA	178860445	178748962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_178749237_178841544_178841617_178860293
transcript_69419.nnic	chr3	-	591	3	NNC	ENSG00000237978.6	novel	964	8	NA	NA	15	25	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	42.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859286	True	NA	-5	True	NA	NA	NA	178860390	178748962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_178749237_178859488_178859624_178860208
transcript_69420.nnic	chr3	-	582	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-61	25	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859362	True	NA	-5	True	NA	NA	NA	178860466	178748962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_178749237_178859488_178859624_178860293
transcript_69422.known	chr3	-	393	2	FSM	ENSG00000237978.6	ENST00000421498.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAAGCCATTGATTTG	NA	False	NA	-30	True	AATAAA	-21	NA	178801936	178748987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_178749237_178801792
transcript_69424.known	chr3	-	7246	4	FSM	ENSG00000171121.17	ENST00000485523.5	7246	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGTTTGTGCATTT	-179258752	False	NA	NA	False	AATAAA	-18	NA	179259208	179236690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179243285_179244494_179244694_179250742_179250935_179258947
transcript_69429.known	chr3	+	5212	18	FSM	ENSG00000171109.19	ENST00000471841.6	5212	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5557288799654	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTAGCATTTATACTA	179346349	True	NA	11	True	AATAAA	-22	NA	179347708	179394936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179347811_179348844_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
transcript_69435.known	chr3	-	6315	10	FSM	ENSG00000114450.11	ENST00000232564.8	6315	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	9.63532595052391	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTATTTTTTTATG	-179447517	True	NA	-3	True	AATAAA	-16	NA	179451470	179396087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426243_179451345
transcript_6945.known	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	376.759280649536	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-150629008	False	NA	NA	False	NA	NA	NA	150629140	150622440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
transcript_69450.known	chr3	+	1750	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	241.709248781973	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	126	True	AATAAA	-23	NA	179562885	179588407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_69460.known	chr3	+	1854	14	FSM	ENSG00000136518.17	ENST00000429709.7	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	70.2105034371597	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	179548122	True	NA	126	True	AATAAA	-23	NA	179562925	179588407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179563118_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_6947.known	chr1	-	360	4	FSM	ENSG00000143420.19	ENST00000638926.1	360	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	546.203258869809	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCGGGGCTCTGCCA	-150629338	False	NA	NA	False	NA	NA	NA	150629470	150622843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625803_150627466_150627593_150629413
transcript_69472.known	chr3	+	1899	14	FSM	ENSG00000136518.17	ENST00000392662.5	1899	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.511409438596	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATATTTTGGACTGT	179548116	True	NA	117	True	AATAAA	-14	NA	179562919	179588398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179563166_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_69503.known	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	400.669301156064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-179598412	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
transcript_69505.known	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_1	111.897894926084	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-179598410	True	NA	24	True	AATAAA	-40	NA	179604638	179588284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_69512.known	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	439.865888652439	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	-179598421	True	NA	-1	True	ATTAAA	-24	NA	179604649	179588830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
transcript_69519.nnic	chr3	-	740	6	NIC	ENSG00000136522.14	novel	1354	7	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	427.65472053983	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	-179598438	True	NA	-1	True	ATTAAA	-24	NA	179604666	179588830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_179588996_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_69526.known	chr3	+	597	3	FSM	ENSG00000136518.17	ENST00000491202.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATGCATAAGAAATG	179548119	True	NA	NA	False	NA	NA	NA	179562922	179570391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179563118_179569823_179569901_179570066
transcript_69527.known	chr3	+	671	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	495.951162470213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	179590229	True	NA	-8	True	AATAAA	-3	NA	179604825	179624091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_69531.known	chr3	+	4199	6	FSM	ENSG00000136521.13	ENST00000259037.8	4199	6	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	101.885033248265	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	179590197	True	NA	10	True	AATAAA	-18	NA	179604793	179627647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_69536.known	chr3	+	1054	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	426.414352478901	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	179590214	True	NA	14	True	AATAAA	-32	NA	179604810	179624500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_69537.known	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	379.954191317848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	179590190	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
transcript_69541.known	chr3	+	824	5	FSM	ENSG00000136521.13	ENST00000468210.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	473.706132533663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTAGATGTCTGTATT	179590212	True	NA	144	True	NA	NA	NA	179604808	179624376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_69544.known	chr3	+	4046	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	437.177563722365	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	179590194	True	NA	10	True	AATAAA	-18	NA	179604790	179627647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
transcript_69548.known	chr3	+	8038	21	FSM	ENSG00000058056.10	ENST00000263966.8	8038	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.1508250600421	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGCCCTTTATGGCTC	179650237	True	NA	11	True	ATTAAA	-15	NA	179653039	179789401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179653394_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
transcript_69549.known	chr3	+	2274	13	FSM	ENSG00000163728.11	ENST00000382584.8	2274	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGGTGTACATTATTT	180601048	True	NA	14	True	AATAAA	-23	NA	180602210	180617828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629_180610004_180617379
transcript_69552.known	chr3	+	3000	12	FSM	ENSG00000163728.11	ENST00000296015.9	3000	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	12.7064765161136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTCCACCCAGCATAA	180601000	True	NA	NA	False	ATTAAA	-20	NA	180602162	180611130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629
transcript_69556.nic	chr3	+	1460	11	ISM	ENSG00000163728.11	ENST00000296015.9	3000	12	-24	2383	-24	-1256	5prime_fragment	FALSE	canonical	3	48	junction_10	13.1772531280233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACAAAGAAAATAGAAA	180600976	True	NA	NA	False	AAGAAA	-45	NA	180602138	180608747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700
transcript_69559.known	chr3	+	4568	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	9.94428926011753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	180601030	True	NA	NA	False	ATTAAA	-19	NA	180602192	180610974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
transcript_6956.known	chr1	-	574	4	FSM	ENSG00000143420.19	ENST00000503241.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	605.77461888799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCAGCTTGCTAGCCAG	-150591090	True	NA	NA	False	NA	NA	NA	150629559	150625554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150626478_150626527_150627466_150627593_150629413
transcript_69563.known	chr3	+	3277	18	FSM	ENSG00000114416.18	ENST00000305586.11	3277	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	194.041571545608	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	180912331	False	NA	11	True	AATAAA	-16	NA	180912481	180977155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180914651_180914996_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_69568.known	chr3	+	1989	15	FSM	ENSG00000114416.18	ENST00000468861.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	162.014549611182	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	180885711	True	NA	16	True	ATTAAA	-16	NA	180912670	180976545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_69569.known	chr3	+	1768	14	FSM	ENSG00000114416.18	ENST00000491062.5	1768	14	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	160.642386471818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGGGGAGGGATCCT	180885711	True	NA	-76	True	NA	NA	NA	180912670	180976418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_6957.known	chr1	-	1369	3	FSM	ENSG00000143420.19	ENST00000513281.5	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	451	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACCTTATAGATATC	-150628984	False	38469	NA	False	AGTAAA	-29	NA	150629116	150624621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627466_150627593_150629060
transcript_69574.known	chr3	+	2651	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_15	76.3426195224892	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	180885712	True	NA	11	True	AATAAA	-16	NA	180912671	180977155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_69575.known	chr3	+	2130	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_14	78.7714661381329	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	180885718	True	NA	24	True	ATTAAA	-24	NA	180912677	180976553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
transcript_69576.known	chr3	+	2094	3	FSM	ENSG00000242808.11	ENST00000646296.2	2094	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACATTATAATTGTTTT	181711004	True	NA	NA	False	AAAAAG	-42	NA	181711101	181741290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_181711366_181715184_181715293_181739568
transcript_6958.known	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_1	94.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	-150591108	True	NA	-2	True	ATTAAA	-28	NA	150629577	150623280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627466_150627593_150629413
transcript_69580.nic	chr3	+	1613	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3851	449	3851	1	3prime_fragment	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTAGTGTTCTCTTAT	181714698	True	NA	8	True	AATAAA	-19	NA	181714952	181740841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_181715293_181739568
transcript_69582.known	chr3	-	520	6	FSM	ENSG00000205981.9	ENST00000643241.1	520	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	586.452180488742	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGCCTCAGAGCTA	-180967040	True	NA	-67	True	NA	NA	NA	180989714	180984577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986947_180987023_180988022_180988097_180988177_180988230_180989599
transcript_69583.known	chr3	-	828	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	549.729606261115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-180967095	True	NA	NA	False	GATAAA	-24	NA	180989769	180984274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
transcript_69584.known	chr3	-	610	6	FSM	ENSG00000205981.9	ENST00000479269.5	610	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_5	519.270103125531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCTACAATTTTAAAAAA	-180989489	False	NA	-54	True	AATAAA	-8	NA	180989518	180984564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989331
transcript_69590.known	chr3	-	769	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	608.623652185815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGATGGAAATTAG	-180967036	True	NA	NA	False	GATAAA	-21	NA	180989710	180984277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
transcript_69592.known	chr3	-	1239	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	587.577813995729	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	-180967029	True	NA	-66	True	NA	NA	NA	180989703	180983772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
transcript_69599.known	chr3	-	324	3	FSM	ENSG00000205981.9	ENST00000646965.1	324	3	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	740.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAGCCTTGGTATAAT	-180966993	True	NA	-15	True	TTTAAA	-23	NA	180989667	180984525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180989599
transcript_696.known	chr1	+	1127	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	1587	junction_1	1206.66054326255	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	7904190	True	NA	NA	False	ATTAAA	-15	NA	7961710	7985505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_69601.known	chr3	-	3147	7	FSM	ENSG00000043093.15	ENST00000632685.1	3147	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	27.1932385386923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATATGGCTGTGTGTGT	-182973098	True	NA	78	True	GATAAA	-40	NA	182980538	182942775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
transcript_69607.known	chr3	-	659	7	FSM	ENSG00000043093.15	ENST00000492563.1	659	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	94.3299469356836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTGTAGCACTAAAGGA	-182973080	True	NA	-77	True	AAAAAG	-4	NA	182980520	182945103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965678_182965754_182980486
transcript_6961.known	chr1	-	793	3	FSM	ENSG00000143420.19	ENST00000503345.1	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTAGATTGACACTT	-150591112	True	NA	NA	False	GGGGCT	-45	NA	150629581	150625464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627311_150627593_150629413
transcript_69610.known	chr3	-	2454	19	FSM	ENSG00000078070.14	ENST00000265594.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	16.5961471060434	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-183096512	True	NA	-1	True	AATAAA	-28	NA	183099496	183015217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_69614.known	chr3	-	2316	18	FSM	ENSG00000078070.14	ENST00000629669.2	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	35.330471473402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTCTGCCTCAA	-183096593	True	NA	-3	True	AATAAA	-26	NA	183099577	183015219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_69626.known	chr3	-	3196	6	FSM	ENSG00000078081.8	ENST00000265598.8	3196	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGCATGTCATTTAT	-183162701	True	NA	-15	True	AATAAA	-14	NA	183162734	183122214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183124215_183135716_183135888_183140537_183140596_183152374_183152504_183153681_183154392_183162606
transcript_69627.known	chr3	+	4108	2	FSM	ENSG00000176597.12	ENST00000326505.4	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGATGTGTATTTAAA	183252993	True	NA	9	True	AATAAA	-15	NA	183253252	183273385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183253473_183269497
transcript_69630.known	chr3	+	1490	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	0	1	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.3461511379761	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446528	True	NA	23	True	AATAAA	-27	NA	183447607	183456013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
transcript_69636.nnic	chr3	+	1109	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	5	84	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	32.4995726467629	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	183446542	True	NA	NA	False	NA	NA	NA	183447621	183455625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_183447948_183452077_183452352_183454011_183454094_183455198
transcript_69637.nnic	chr3	+	1497	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	32.4995726467629	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446542	True	NA	23	True	AATAAA	-27	NA	183447621	183456013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_183447948_183452077_183452352_183454011_183454094_183455198
transcript_69639.known	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	71	junction_1	9.67241208569794	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	183446571	True	NA	NA	False	NA	NA	NA	183447650	183455625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
transcript_69642.nnic	chr3	+	1341	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	38.3231870630127	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446545	True	NA	23	True	AATAAA	-27	NA	183447624	183456013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_183447795_183452077_183452352_183454011_183454094_183455198
transcript_69645.nnic	chr3	+	1502	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	36.2859017617954	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446545	True	NA	23	True	AATAAA	-27	NA	183447624	183456013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_183447795_183452077_183452513_183454011_183454094_183455198
transcript_69648.nnic	chr3	+	1053	3	NIC	ENSG00000240024.6	novel	1491	4	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446530	True	NA	23	True	AATAAA	-27	NA	183447609	183456013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_183447766_183454011_183454094_183455198
transcript_69650.known	chr3	+	7331	8	FSM	ENSG00000114796.16	ENST00000242810.11	7331	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	21.8426656069338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	183632150	True	NA	9	True	ATTAAA	-17	NA	183635622	183684519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183635794_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_69652.known	chr3	+	389	2	FSM	ENSG00000114796.16	ENST00000481126.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGTCCCCGGGGAGCC	183632162	True	NA	NA	False	NA	NA	NA	183635634	183636450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183635794_183636220
transcript_69654.known	chr3	-	1513	11	FSM	ENSG00000175193.14	ENST00000639100.1	1513	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	470.139989790275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTGCCTGTCTTTGGA	-183874032	False	NA	NA	False	NA	NA	NA	183884933	183829270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884882
transcript_69661.known	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	301.323512814715	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-183873987	True	NA	-5	True	AATAAA	-21	NA	183884888	183829389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_69662.known	chr3	-	1545	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	433.807561022166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTGTAAGCAGATGT	-183873978	True	NA	-17	True	AATAAA	-9	NA	183884879	183829401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_69663.known	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	451.041289571098	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	-183873954	True	NA	-12	True	AATAAA	-14	NA	183884855	183829396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_69664.known	chr3	-	1534	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	425.031104744112	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTCTCTCTTTAA	-183874006	True	NA	0	True	AATAAA	-26	NA	183884907	183829384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_69665.known	chr3	-	1923	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	77.9887812444841	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_69666.known	chr3	-	2000	7	FSM	ENSG00000114770.17	ENST00000443376.5	2000	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	85.6687742931396	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183984895_183985303_183985456_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_69668.known	chr3	-	1848	6	FSM	ENSG00000114770.17	ENST00000392579.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	78.4382559724526	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183984895_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_69669.known	chr3	-	883	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	82.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	-184014656	True	NA	NA	False	ATTAAA	-18	NA	184017939	184000662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184001252_184014263_184014448_184017829
transcript_69670.known	chr3	+	2222	16	FSM	ENSG00000145191.15	ENST00000647909.1	2222	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.1286688027442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTGAGTGCCCTCCT	184131129	True	NA	NA	False	NA	NA	NA	184135376	184144966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137873_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_69671.known	chr3	+	2389	16	FSM	ENSG00000145191.15	ENST00000650270.1	2389	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	75.5735403431651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAAAAGAGAGAGTGGT	184135503	False	NA	-8	True	NA	NA	NA	184135518	184145288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143430_184143566_184144098_184144225_184144596_184144708_184144883
transcript_69672.known	chr3	+	2562	16	FSM	ENSG00000145191.15	ENST00000648915.2	2562	16	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_7	27.9971427113554	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	184131110	True	NA	15	True	ATTAAA	-16	NA	184135357	184145311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_69682.known	chr3	+	585	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	184131117	True	NA	16	True	AATAAA	-30	NA	184135364	184136980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611
transcript_69684.known	chr3	-	362	3	FSM	ENSG00000272721.5	ENST00000608135.1	362	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCACGTTGTAGAAAAGG	-184135133	True	NA	-14	True	ATTAAA	-3	NA	184135238	184134018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184134279_184134535_184134594_184135194
transcript_69685.known	chr3	+	3084	15	FSM	ENSG00000145191.15	ENST00000649814.1	3084	15	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_9	77.9261817101182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCTGCTGCTTGTATA	184131089	True	NA	-33	True	NA	NA	NA	184135336	184145263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184144225_184144596_184144708_184144883
transcript_6969.known	chr1	-	703	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCAGTTTCTTCA	-150591108	True	NA	-21	True	AATAAA	-11	NA	150629577	150627053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150627593_150629413
transcript_69692.known	chr3	+	1931	12	FSM	ENSG00000161203.14	ENST00000292807.9	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1261.99908318129	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	184132615	True	NA	22	True	AATAAA	-15	NA	184174854	184184091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_69704.known	chr3	+	2091	11	FSM	ENSG00000161203.14	ENST00000382456.7	2091	11	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_4	1055.3005496066	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	184174674	False	NA	22	True	AATAAA	-15	NA	184174688	184184091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_6972.known	chr1	-	2546	3	FSM	ENSG00000143420.19	ENST00000356527.9	2546	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	661.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTTCTTCATCTCCGA	-150591108	True	NA	-27	True	TATAAA	-17	NA	150629577	150623621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627397_150627593_150629413
transcript_6973.known	chr1	-	973	6	FSM	ENSG00000143457.11	ENST00000427665.1	973	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.4289998452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGCAATGAATCGAGCC	-150691925	True	NA	NA	False	NA	NA	NA	150697144	150648436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694107_150694174_150694655_150694851_150696991
transcript_69734.known	chr3	+	2453	21	FSM	ENSG00000161204.12	ENST00000292808.5	2453	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100.712598516769	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCATGTCTGCT	184179709	True	NA	18	True	ATTAAA	-15	NA	184186173	184194005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184186281_184186506_184186637_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_69737.known	chr3	+	2624	21	FSM	ENSG00000161204.12	ENST00000429586.7	2446	21	-176	-2	-72	1	multi-exon	TRUE	canonical	3	392	junction_14	28.5019297592286	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCATGTCTGCTGC	184186005	False	NA	20	True	ATTAAA	-17	NA	184186022	184194007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184186281_184186506_184186655_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_6974.known	chr1	-	3124	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	17.1682847133894	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCTCTGTGCACAA	-150691935	True	NA	-7	True	AATAAA	-17	NA	150697154	150646229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_69749.known	chr3	-	1552	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	252.195856429086	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243376	True	NA	27	True	NA	NA	NA	184248962	184242300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
transcript_69750.nic	chr3	-	1516	9	NIC	ENSG00000214160.10	novel	1552	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	286.116672006369	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243377	True	NA	27	True	NA	NA	NA	184248963	184242300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_69751.known	chr3	-	1697	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	329.081083283436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTTGGACTCTGCCC	-184249174	True	NA	-47	True	NA	NA	NA	184249520	184242468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
transcript_69752.known	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	324.015600511765	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184249202	True	NA	-3	True	AATAAA	-14	NA	184249548	184242424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
transcript_69755.nic	chr3	-	1403	9	NIC	ENSG00000214160.10	novel	1533	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	286.116672006369	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184243388	True	NA	-3	True	AATAAA	-14	NA	184248974	184242424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_69762.known	chr3	-	1452	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	334.679255529279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243376	True	NA	27	True	NA	NA	NA	184248962	184242300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
transcript_69780.known	chr3	-	725	4	FSM	ENSG00000214160.10	ENST00000482048.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_3	98.2728627625936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTATAGAAAGTTTCTG	-184243343	True	NA	NA	False	NA	NA	NA	184248929	184245066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184245359_184245467_184245616_184245712_184245813_184248744
transcript_69781.known	chr3	-	1017	4	FSM	ENSG00000214160.10	ENST00000461415.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	260.489709756238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATCTCCACCCTTCCTC	-184243364	True	NA	NA	False	NA	NA	NA	184248950	184244758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184245359_184245467_184245616_184245712_184245813_184248781
transcript_69784.known	chr3	+	975	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	4	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	184248355	True	NA	18	True	AATACA	-24	NA	184249671	184258759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184249891_184257472_184257757_184258287
transcript_69785.known	chr3	+	2913	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2582	junction_8	233.22787140477	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	184275501	True	NA	24	True	AATAAA	-16	NA	184299240	184309050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
transcript_69786.known	chr3	+	1335	7	FSM	ENSG00000175182.15	ENST00000450976.5	1335	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	32.4486774255387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGGGCTCAAGGCT	184334411	True	NA	NA	False	NA	NA	NA	184335925	184345033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184336124_184337310_184337372_184338386_184338530_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_69787.known	chr3	+	2421	6	FSM	ENSG00000175182.15	ENST00000340957.9	2421	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	13.0751673029449	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	184334422	True	NA	22	True	ATTAAA	-27	NA	184335936	184346273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_6979.nnic	chr1	+	1861	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_3	38.4476556141232	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGTGTGTGTCTT	150641563	True	NA	5	True	NA	NA	NA	150641682	150659642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150658044
transcript_69801.known	chr3	+	994	5	FSM	ENSG00000163882.10	ENST00000438240.5	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	412.692606548748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	184361180	True	NA	-28	True	ATTAAA	-28	NA	184361788	184368550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184362147_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_69807.known	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	402.926792358116	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	184354211	True	NA	13	True	ATTAAA	-11	NA	184363402	184368533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_69808.known	chr3	+	807	4	FSM	ENSG00000163882.10	ENST00000443489.5	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	441.72867489243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTGGTGTATTGT	184354169	True	NA	13	True	AAAAAG	-29	NA	184363360	184368591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184368176
transcript_69809.known	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	383.402774507436	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	184354242	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
transcript_6981.nnic	chr1	-	1357	4	NIC	ENSG00000143457.11	novel	3124	5	NA	NA	-38	534	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	124.835892274618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTCAGACTCTGCT	-150691973	True	NA	-10	True	CATAAA	-18	NA	150697192	150647902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_150648749_150661813_150661929_150694655_150694851_150696991
transcript_69810.known	chr3	-	1918	6	FSM	ENSG00000090534.20	ENST00000647395.1	1918	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.16619037896906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGATGTTCTTCGAGG	-184378133	True	NA	NA	False	AATAAA	-32	NA	184378207	184371934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184373179_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
transcript_69811.known	chr3	-	1505	6	FSM	ENSG00000090534.20	ENST00000445696.6	1505	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.0591260281974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTGCAACTCACTGA	-184378066	False	NA	NA	False	NA	NA	NA	184378140	184372268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184373167_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
transcript_69812.known	chr3	-	1701	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTGTGATGCAC	-184702950	True	NA	-5	True	AATAAA	-19	NA	184712064	184710363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184710400_184712100
transcript_69817.known	chr3	+	5011	47	FSM	ENSG00000156931.16	ENST00000436792.6	5011	47	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_16	19.5236272932135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGCTGGCTCTCA	184810652	True	NA	16	True	AATAAA	-27	NA	184812170	185052612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_69820.nnic	chr3	+	2813	24	NNC	ENSG00000156931.16	novel	564	4	NA	NA	-8061	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.6727744016782	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTCTCCTGGCTGGCT	184907227	True	NA	8	True	AATAAA	-19	NA	184907321	185052604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_184907415_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_69822.known	chr3	+	477	2	FSM	ENSG00000156931.16	ENST00000485024.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGATATTTGTAGACTT	184810677	True	NA	4	True	AATAAA	-18	NA	184812195	184816230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184812226_184815783
transcript_69823.known	chr3	-	3801	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	3.43592135468138	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	-185253751	True	NA	2	True	AATAAA	-22	NA	185254049	185190623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
transcript_69825.known	chr3	+	1681	3	FSM	ENSG00000073803.14	ENST00000448876.5	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	12.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTGCTGTTCTTTC	185281731	True	NA	11	True	AATAAA	-24	NA	185282940	185293079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_185283028_185285516_185285644_185291612
transcript_69829.known	chr3	+	526	3	FSM	ENSG00000073803.14	ENST00000454237.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTGTTCTGTGGCC	185281816	True	NA	108	True	NA	NA	NA	185283025	185291917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_185283120_185285516_185285644_185291612
transcript_6983.known	chr1	-	3538	22	FSM	ENSG00000143437.21	ENST00000354396.6	3538	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	76.078220875688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGAGGTTTTTCCTC	-150871651	True	NA	NA	False	NA	NA	NA	150876579	150810858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816401_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_69838.known	chr3	-	2805	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	11.6699400169838	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGCTTGTTTGAAC	-185498087	True	NA	-7	True	AATAAA	-16	NA	185499035	185489600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
transcript_69840.known	chr3	-	1060	3	FSM	ENSG00000163900.11	ENST00000296254.3	1060	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	41.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAAAGAAAATGCT	-185498039	True	NA	NA	False	NA	NA	NA	185498987	185490996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185491758_185496827_185496982_185498842
transcript_69842.nic	chr3	+	2361	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-52	-243	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	29.3954051468933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTCTGTGTGTTT	185579796	True	NA	15	True	NA	NA	NA	185582443	185630162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_69843.nic	chr3	+	3300	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-52	696	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	29.3954051468933	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	185579796	True	NA	25	True	AATAAA	-26	NA	185582443	185631101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_69845.known	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	39.9194501465138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	185585418	True	NA	18	True	AATAAA	-18	NA	185586294	185633551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_69854.known	chr3	-	4283	16	FSM	ENSG00000073792.16	ENST00000382199.7	4283	16	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_6	101.223097934985	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCTCACTGCATGTGA	-185810382	True	NA	-1	True	AATAAA	-18	NA	185825042	185643129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_69855.known	chr3	-	3291	15	FSM	ENSG00000073792.16	ENST00000346192.7	3291	15	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	142.746385636362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-185810364	True	NA	20	True	TTTAAA	-10	NA	185825024	185643974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_69858.nic	chr3	-	1517	10	NIC	ENSG00000073792.16	novel	3291	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	290.291041695897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGCAAGAATA	-185825062	False	NA	NA	False	AATAAA	-15	NA	185825074	185675015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185693176_185693229_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_69860.nic	chr3	-	1465	9	ISM	ENSG00000073792.16	ENST00000346192.7	3291	15	-50	31041	-32	0	5prime_fragment	FALSE	canonical	3	725	junction_2	26.0645233027577	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGCAAGAATA	-185825062	False	NA	NA	False	AATAAA	-15	NA	185825074	185675015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_69868.known	chr3	-	1697	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	482.057396306014	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAACATAT	-185903293	True	NA	-37	True	AATAAA	-13	NA	185938029	185917329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
transcript_6987.known	chr1	-	2427	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_17	46.569410561011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTCTGTAAACAGAA	-150871681	True	NA	-55	True	AAAAAG	-2	NA	150876609	150811960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_69875.known	chr3	-	4178	9	FSM	ENSG00000136527.19	ENST00000453386.7	4178	9	0	0	0	0	multi-exon	TRUE	canonical	3	1023	junction_8	98.7540347277011	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTGGTTCTATTCC	-185903278	True	NA	-1	True	AATATA	-29	NA	185938014	185914557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185937824
transcript_69883.known	chr3	-	976	8	FSM	ENSG00000136527.19	ENST00000382191.4	976	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	409.914177179884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAGACTTTCTGAAA	-185938089	False	NA	NA	False	ATTAAA	-36	NA	185938103	185917714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185937824
transcript_69898.known	chr3	-	288	2	FSM	ENSG00000136527.19	ENST00000480461.1	538	2	11	239	1	-239	multi-exon	FALSE	canonical	3	88	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGAATGCATGCT	-185903277	True	NA	12	True	NA	NA	NA	185938013	185931753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185931853_185937824
transcript_69900.known	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	81.8984737342522	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	-186102207	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_69903.known	chr3	+	1640	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	67.5548245574486	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	186560489	True	NA	31	True	AATACA	-17	NA	186570719	186585793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_69918.known	chr3	-	1365	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_10	118.059349481521	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTAAAGTGAATATACAA	-186796334	True	NA	-63	True	AATAAA	-20	NA	186806482	186789899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_69919.known	chr3	-	1448	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_10	179.145332063105	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTAT	-186806640	True	NA	-58	True	AATAAA	-25	NA	186806695	186789894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_6993.known	chr1	-	2323	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	77.0091552998733	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150970233	True	NA	-20	True	AATAAA	-19	NA	150974835	150965185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_6994.nnic	chr1	-	2269	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-155	0	intron_retention	FALSE	canonical	1	10	junction_10	184.065450315913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150975148	False	65	-20	True	AATAAA	-19	NA	150975158	150965185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974995
transcript_69941.known	chr3	-	799	7	FSM	ENSG00000163918.12	ENST00000449502.5	799	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	322.390894550217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAACAGCAGCGATTACT	-186796310	True	NA	NA	False	GATAAA	-1	NA	186806458	186792549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186792611_186792803_186792948_186794657_186794782_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_69942.known	chr3	-	701	7	FSM	ENSG00000163918.12	ENST00000418288.5	701	7	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	224.344229552118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAAGGAAAATGTCAAA	-186796323	True	NA	NA	False	GATAAA	-29	NA	186806471	186792521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_69946.known	chr3	+	1889	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	570.907663287155	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693054	True	NA	23	True	AATAAA	-19	NA	186783576	186789897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_69947.known	chr3	+	1977	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_11	775.944393935119	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	186693054	True	NA	7	True	AATAAA	-3	NA	186783576	186789881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_69948.known	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	804.252033465464	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693074	True	NA	23	True	AATAAA	-19	NA	186783596	186789897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_69949.known	chr3	-	1111	9	FSM	ENSG00000163918.12	ENST00000433496.5	1111	9	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	282.853070294455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAACATTCAAACTT	-186804714	False	10148	-43	True	AATAAA	-40	NA	186804724	186789879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186790065_186790141_186790256_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582
transcript_6995.nnic	chr1	-	2263	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-172	0	intron_retention	FALSE	canonical	2	14	junction_10	182.911590666092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150975165	False	NA	-20	True	AATAAA	-19	NA	150975175	150965185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975018
transcript_69950.known	chr3	+	3947	7	FSM	ENSG00000073849.16	ENST00000457772.6	3947	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	104.774360731367	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921204	True	NA	20	True	AATAAA	-20	NA	186930525	187078553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_6996.known	chr1	-	2544	11	FSM	ENSG00000143418.20	ENST00000271688.10	2544	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	182.623218677144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTAATATTTTCTTTT	-150974993	False	65	-7	True	AATAAA	-32	NA	150975003	150965172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969132_150974618
transcript_69963.nnic	chr3	-	1005	5	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-2	-19955	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	282.290076871292	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATGTCAAAGTCCTC	-187180856	False	NA	-3	True	AATAAA	-19	NA	187180910	187140902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187141172_187142295_187142393_187142775_187143109_187173615_187173676_187180664
transcript_69977.known	chr3	-	749	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	234.623575589117	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187180854	False	NA	-2	True	AATAAA	-26	NA	187180908	187120947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
transcript_6998.nnic	chr1	-	2422	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-381	-73	intron_retention	FALSE	canonical	1	10	junction_10	184.065450315913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-150975374	False	NA	-23	True	AATAAA	-16	NA	150975384	150965258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974995
transcript_69983.nnic	chr3	-	1311	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-2	-20032	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	293.966362399208	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGCTTGTTTCAAT	-187180856	False	NA	-7	True	AATAAA	-17	NA	187180910	187140979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187141172_187142295_187143109_187173615_187173676_187180664
transcript_69986.known	chr3	-	729	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	102	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187134051	True	NA	-2	True	AATAAA	-26	NA	187139496	187120947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187121329_187127998_187128063_187139212
transcript_69996.nnic	chr3	-	590	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-159	-50631	at_least_one_novel_splicesite	FALSE	canonical	3	319	junction_1	218.5	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAATATTTTCTTGTA	-187181013	False	NA	-19	True	AATAAA	-13	NA	187181067	187171578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187171706_187173615_187173676_187180664
transcript_69998.known	chr3	-	653	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187134039	True	NA	-2	True	AATAAA	-26	NA	187139484	187120947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187121329_187139212
transcript_69999.nic	chr3	-	1581	2	ISM	ENSG00000163923.10	ENST00000433055.1	749	4	-25	51416	-25	-51416	5prime_fragment	FALSE	canonical	3	756	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAAAACCAAGGG	-187180879	False	NA	NA	False	ACTAAA	-12	NA	187180933	187172363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_187173676_187180664
transcript_7.known	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00025_+_0_2000
transcript_7000.nnic	chr1	-	2101	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-494	-73	intron_retention	FALSE	canonical	0	0	junction_10	186.952641061848	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-150975487	False	NA	-23	True	AATAAA	-16	NA	150975497	150965258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975429
transcript_70007.nnic	chr3	+	2083	4	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19678	-996	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	12.8322510366134	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTAACTACTTTTAAA	187177675	False	NA	35	True	NA	NA	NA	187177807	187200466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_187178662_187178759_187178875_187197589_187197788_187199550
transcript_70010.nnic	chr3	+	1227	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-20602	-996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTAACTACTTTTAAA	187176751	False	NA	35	True	NA	NA	NA	187176883	187200466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_187176997_187197589_187197788_187199550
transcript_70011.nnic	chr3	+	1308	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-20382	-996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTAACTACTTTTAAA	187176971	False	NA	35	True	NA	NA	NA	187177103	187200466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_187177298_187197589_187197788_187199550
transcript_70012.nnic	chr3	+	2877	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-20374	-996	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	10	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTAACTACTTTTAAA	187176979	False	NA	35	True	NA	NA	NA	187177111	187200466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_187178875_187197589_187197788_187199550
transcript_70014.known	chr3	-	2440	9	FSM	ENSG00000127241.18	ENST00000169293.10	2440	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	4.2555111326373	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACGTATTAACAGCATTC	-187291947	False	NA	NA	False	AATAAA	-14	NA	187291957	187246360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187247386_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_70019.nnic	chr3	+	916	4	NNC	ENSG00000228952.1	novel	246	2	NA	NA	-36721	503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.17856276425687	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGAGTCATGAGTATAT	NA	False	NA	6	True	AATAAA	-30	NA	187412123	187449953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_187412172_187447633_187447758_187448849_187448891_187449250
transcript_70022.known	chr3	-	607	2	FSM	ENSG00000157005.4	ENST00000287641.4	607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGGTTTCTATTG	-187670348	True	NA	3	True	AATAAA	-23	NA	187670394	187668911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187669278_187670153
transcript_70023.nic	chr3	+	1272	3	ISM	ENSG00000145012.14	ENST00000414139.5	502	4	-76	77584	-17	802	5prime_fragment	FALSE	canonical	1	6	junction_2	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGAATATTAGACTTCT	188152976	True	NA	NA	False	AATAAA	-12	NA	188153854	188407093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_188154022_188225404_188225528_188406111
transcript_70024.known	chr3	-	3477	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_14	26.8663548031392	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCATTTATTTTTGT	-190119001	True	NA	-33	True	AATAAA	-17	NA	190120897	189956727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
transcript_70025.known	chr3	-	3446	4	FSM	ENSG00000163347.6	ENST00000295522.4	3446	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATTGGCTTGTTTTCT	-190322040	True	NA	-5	True	AATAAA	-22	NA	190322446	190305706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_190308440_190310168_190310254_190312871_190313037_190321983
transcript_70027.known	chr3	+	4697	11	FSM	ENSG00000196083.10	ENST00000072516.7	4697	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	5.6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCATGTGTTTTATG	190513597	True	NA	NA	False	AATAAA	-27	NA	190514050	190651519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349_190629499_190644247_190644398_190645698_190645843_190648337
transcript_70028.known	chr3	+	2048	9	FSM	ENSG00000196083.10	ENST00000422485.5	2048	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.86362695664617	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	190513644	True	NA	27	True	AATAAA	-43	NA	190514097	190630285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_190514220_190556129_190556217_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_7003.nnic	chr1	-	2011	10	NIC	ENSG00000143418.20	novel	2323	11	NA	NA	76	-73	intron_retention	FALSE	canonical	3	17	junction_1	190.695801969757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-150974740	False	NA	-23	True	AATAAA	-16	NA	150974750	150965258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_150966289_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_70030.known	chr3	+	1957	8	FSM	ENSG00000196083.10	ENST00000422940.5	1957	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	4.3705881545081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	190513648	True	NA	27	True	AATAAA	-43	NA	190514101	190630285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_70032.nnic	chr3	+	1153	9	NNC	ENSG00000152492.15	novel	420	2	NA	NA	-1855	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	87.5881698632869	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	191359134	True	NA	20	True	AATAAA	-27	NA	191359247	191392175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_191359304_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_70033.known	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	10.356157588604	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	-192408863	True	NA	6	True	NA	NA	NA	192409049	192142508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
transcript_70036.known	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	-192915599	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_192799651_192917629
transcript_70038.nnic	chr3	+	1030	6	NNC	ENSG00000127252.7	novel	969	4	NA	NA	-508	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	29.36256119619	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240530	True	NA	12	True	AATAAA	-22	NA	193240619	193270855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_193240822_193241417_193241534_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_70039.nnic	chr3	+	1085	6	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-507	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.2438027622948	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240531	True	NA	12	True	AATAAA	-22	NA	193240620	193270855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_193240822_193251366_193251501_193254645_193254739_193255650_193255790_193262969_193263236_193270603
transcript_70040.nnic	chr3	+	1047	6	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-507	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	28.667751917442	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240531	True	NA	12	True	AATAAA	-22	NA	193240620	193270855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_193240822_193251366_193251501_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_70041.nnic	chr3	+	992	5	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-507	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	29.3545141332641	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240531	True	NA	12	True	AATAAA	-22	NA	193240620	193270855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_193240822_193251366_193251501_193255650_193255790_193262969_193263236_193270603
transcript_70043.known	chr3	+	969	4	FSM	ENSG00000127252.7	ENST00000264735.4	969	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.17726659862414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240918	True	NA	12	True	AATAAA	-22	NA	193241221	193270855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193241534_193255650_193255790_193262969_193263236_193270603
transcript_70044.known	chr3	+	6429	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	79.3953818976058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583184	True	NA	10	True	TATAAA	-19	NA	193593207	193697811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70047.known	chr3	+	4087	30	FSM	ENSG00000198836.11	ENST00000392437.6	4087	30	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	86.1767533507368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGACATTCAAGCAAAG	193583256	True	NA	25	True	AATAAA	-16	NA	193593279	193695652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70048.known	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_6	44.6782126687836	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583162	True	NA	10	True	TATAAA	-19	NA	193593185	193697811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70051.known	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	55.0833667808928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583120	True	NA	10	True	TATAAA	-19	NA	193593143	193697811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70053.known	chr3	+	5830	28	FSM	ENSG00000198836.11	ENST00000646793.1	5830	28	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	80.6521260234271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATAATTCTATTATTG	193583223	True	NA	6	True	ATTAAA	-14	NA	193593246	193697524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70057.known	chr3	-	772	2	FSM	ENSG00000214146.3	ENST00000414309.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCGGGCCACCTCCTCG	-194003615	True	NA	NA	False	NA	NA	NA	194003636	194001856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_194002577_194003584
transcript_70059.known	chr3	+	686	4	FSM	ENSG00000233058.3	ENST00000661941.1	686	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTTTCTTTCTTTC	194486662	True	NA	NA	False	AATAAA	-12	NA	194487139	194513861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194487173_194488598_194488727_194497937_194498136_194513534
transcript_7006.nic	chr1	+	1539	9	ISM	ENSG00000143379.13	ENST00000534805.5	2043	13	-53	5463	3	0	5prime_fragment	FALSE	canonical	3	49	junction_1	11.1460475057305	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	150923567	True	NA	NA	False	AATAAA	-22	NA	150926341	150945320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_70061.known	chr3	-	3283	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.7092480930166	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTCTGGTATTTCT	-194661730	True	NA	-14	True	ATTAAA	-18	NA	194672191	194640790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_70068.nic	chr3	-	2185	10	NIC	ENSG00000145014.18	novel	2342	10	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	15.0119294126824	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCACTGTGGAGTGCA	-194633710	False	NA	-7	True	AATAAA	-17	NA	194633749	194587680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_194588640_194604286_194604446_194610915_194611021_194615568_194615698_194617098_194617270_194623223_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633562
transcript_7007.known	chr1	+	1478	9	FSM	ENSG00000143379.13	ENST00000368962.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	23.497007788227	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	150923574	True	NA	NA	False	AATAAA	-22	NA	150926348	150945320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150926464_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_70071.known	chr3	+	1101	4	FSM	ENSG00000231770.7	ENST00000447982.7	1125	4	23	1	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	194583505	True	NA	6	True	AATAAA	-20	NA	194584013	194590249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194584449_194589024_194589143_194589473_194589627_194589854
transcript_70074.known	chr3	+	663	3	FSM	ENSG00000231770.7	ENST00000419571.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	194583790	False	NA	6	True	AATAAA	-20	NA	194584298	194590249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194584449_194589024_194589143_194589854
transcript_70077.known	chr3	+	972	2	FSM	ENSG00000229334.1	ENST00000447139.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGGCCCTGTAATGC	NA	False	NA	NA	False	AATAAA	-23	NA	194632922	194645401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194633168_194644674
transcript_70078.known	chr3	+	905	1	FSM	ENSG00000231770.7	ENST00000666676.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAATTTGTTTTTAT	194583495	True	NA	NA	False	AATGAA	-17	NA	194584003	194584908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194584000_194584900
transcript_70079.known	chr3	-	160	1	FSM	ENSG00000272707.1	ENST00000609789.1	160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTGTTTTTGTTTTTG	-194637625	False	NA	-3	True	NA	NA	NA	194637664	194637504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_194637500_194637700
transcript_70081.known	chr3	-	3386	6	FSM	ENSG00000184203.8	ENST00000618156.5	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_5	29.0585615610959	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCCTGTGTGTGGATT	-195538662	True	NA	-8	True	AATAAA	-15	NA	195543325	195514427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195524818_195524897_195529793_195529902_195542903
transcript_70083.known	chr3	-	839	5	FSM	ENSG00000184203.8	ENST00000438848.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	147.608434718345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGCAAAACAAATTACGA	-195538690	True	NA	NA	False	NA	NA	NA	195543353	195516924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195529793_195529902_195542903
transcript_70084.known	chr3	-	1668	2	FSM	ENSG00000184203.8	ENST00000462906.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATAGTTA	NA	False	NA	NA	False	NA	NA	NA	195543386	195528716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195529902_195542903
transcript_70087.nic	chr3	+	2288	15	NIC	ENSG00000215837.7	novel	2001	15	NA	NA	-44	2958	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	39.8267293076765	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	195655828	True	NA	NA	False	AATAAA	-11	NA	195658051	195688862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_70091.nic	chr3	+	2137	14	NIC	ENSG00000242086.8	novel	4208	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_13	41.8642494810953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	195655828	True	NA	15	True	AATAAA	-16	NA	195658051	195686140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195685817
transcript_70092.known	chr3	+	2131	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	39.3456838831998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	195655841	True	NA	NA	False	AATAAA	-11	NA	195658064	195688862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_70093.nic	chr3	+	1709	8	ISM	ENSG00000242086.8	ENST00000445430.5	4208	14	-25	14244	-10	105	5prime_fragment	FALSE	canonical	3	36	junction_4	48.4169813354019	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGACTTTTTTTTTTC	195655828	True	NA	8	True	AATAAA	-17	NA	195658051	195671896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_70095.known	chr3	+	1439	7	FSM	ENSG00000242086.8	ENST00000453324.5	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	46.9742837447612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCGGATGGTTTCTTGT	195655849	True	NA	-97	True	ATTAAA	-8	NA	195658072	195671791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_70096.known	chr3	+	1279	6	FSM	ENSG00000242086.8	ENST00000457233.5	1279	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	48.7031826475437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAATCAGCAAAACT	195655838	True	NA	NA	False	TTTAAA	-26	NA	195658061	195666682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065
transcript_70098.known	chr3	-	3508	1	FSM	ENSG00000260261.2	ENST00000570130.1	3508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-195952626	False	NA	-1	True	AATAAA	-14	NA	195952695	195949187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195949200_195952700
transcript_7010.known	chr1	+	1045	8	FSM	ENSG00000143379.13	ENST00000368963.5	1045	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	27.1684090255501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCTTCTCTACAATTT	150923649	True	NA	NA	False	NA	NA	NA	150926423	150945110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150943919_150943994_150944917
transcript_70102.nic	chr3	-	2288	15	NIC	ENSG00000185485.14	novel	2491	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	42.3597927381181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGAAAGTAGATAAAATTT	-195986038	True	NA	NA	False	AATAAA	-20	NA	195990316	195959747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195960087_195963299_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_70107.nic	chr3	-	2145	14	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	37.6338636377889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-195986038	True	NA	-15	True	AATAAA	-16	NA	195990316	195963103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_70108.nic	chr3	-	1580	7	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	2	3260	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	41.031491970599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGACTTTTTTTTTTCCT	-195986038	True	NA	NA	False	AATAAA	-19	NA	195990316	195976484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_70109.known	chr3	-	548	5	FSM	ENSG00000185485.14	ENST00000435731.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	45.1829613903294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTGTGGAGTATTT	-195986027	True	NA	NA	False	NA	NA	NA	195990305	195982292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_70111.known	chr3	-	5012	19	FSM	ENSG00000072274.13	ENST00000360110.9	5012	19	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_10	30.937212400459	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-196070608	True	NA	-2	True	AATAAA	-16	NA	196082090	196049283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196082042
transcript_70115.nic	chr3	-	723	4	ISM	ENSG00000163958.14	ENST00000296326.8	1308	8	3816	0	3802	0	3prime_fragment	FALSE	canonical	3	26	junction_2	7.87400787401181	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	-196207563	False	NA	-8	True	ATTAAA	-20	NA	196207584	196197451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196197726_196198275_196198452_196198788_196198875_196207397
transcript_70118.nnic	chr3	-	580	3	NIC	ENSG00000163958.14	novel	1813	8	NA	NA	3859	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	-196207104	True	NA	-8	True	ATTAAA	-20	NA	196207527	196197451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196197726_196198275_196198452_196207397
transcript_70119.known	chr3	-	572	3	FSM	ENSG00000163958.14	ENST00000460442.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	-196198889	False	NA	-8	True	ATTAAA	-20	NA	196198910	196197451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196197726_196198275_196198452_196198788
transcript_7012.known	chr1	+	4437	22	FSM	ENSG00000143379.13	ENST00000271640.9	4437	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	17.9148907520419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGGTTTTGTTTCT	150923564	True	NA	13	True	GATAAA	-4	NA	150926338	150964735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
transcript_70126.known	chr3	+	1430	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	3.69966214673719	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCACCTTGCCTCT	196216357	True	NA	11	True	AATAAA	-23	NA	196216533	196233427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
transcript_70127.nic	chr3	-	2271	9	NIC	ENSG00000161217.12	novel	5546	9	NA	NA	-1	1064	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	22.155346420221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTAAATGTCTGCTG	-196284646	True	NA	-30	True	NA	NA	NA	196287727	196237726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287531
transcript_70128.known	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_8	17.5979402203781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284645	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_70129.nic	chr3	-	1641	9	NIC	ENSG00000161217.12	novel	5546	9	NA	NA	-1	434	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	22.155346420221	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAACTAATTTTTTGCC	-196284646	True	NA	NA	False	TTTAAA	-17	NA	196287727	196238356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287531
transcript_7013.known	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	4.0265391779392	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	150982233	True	NA	7	True	NA	NA	NA	150982291	150995634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_70137.nic	chr3	-	1131	7	ISM	ENSG00000161217.12	ENST00000411591.5	1084	8	70	2095	7	0	5prime_fragment	FALSE	canonical	3	30	junction_6	24.6874912095624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTCTTCTTCGGT	-196284575	True	NA	3	True	AATAAA	-22	NA	196287656	196241659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287531
transcript_70138.nic	chr3	-	1144	7	ISM	ENSG00000161217.12	ENST00000431016.6	5546	9	-26	7292	0	0	5prime_fragment	FALSE	canonical	3	45	junction_6	19.3620476419435	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTCTTCTTCGGT	-196284671	True	NA	3	True	AATAAA	-22	NA	196287752	196241659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_7014.known	chr1	-	2400	10	FSM	ENSG00000143409.17	ENST00000312210.9	2400	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.3813431847316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTCCTGAGATCTGT	-151006293	True	NA	NA	False	NA	NA	NA	151006857	150996548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002324_151006311
transcript_70144.known	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	101.993872364961	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315754	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
transcript_70145.nnic	chr3	-	642	4	NIC	ENSG00000213123.11	novel	625	5	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	129.631100520755	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315861	True	NA	0	True	AATAAA	-25	NA	196318321	196291218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318039
transcript_70146.known	chr3	+	322	2	FSM	ENSG00000235897.1	ENST00000420226.1	322	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGTGAATTTTGTTGT	196318293	True	NA	NA	False	TTTAAA	-23	NA	196318329	196323673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_196318438_196323459
transcript_70148.known	chr3	-	800	6	FSM	ENSG00000213123.11	ENST00000446494.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.609118225144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTGTTTTAGGCC	-196315839	True	NA	-2	True	AATAAA	-23	NA	196318299	196291220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196291375_196296005_196296070_196305655_196305774_196306942_196307013_196316097_196316232_196318039
transcript_70149.known	chr3	-	10521	11	FSM	ENSG00000163960.12	ENST00000296328.9	10521	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	8.33306666239986	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTTTGTGTTGTT	-196421959	True	NA	-7	True	AATAAA	-19	NA	196432427	196347661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196407245_196407394_196432326
transcript_7015.known	chr1	-	2623	10	FSM	ENSG00000143409.17	ENST00000683666.2	2542	10	0	-81	0	81	multi-exon	FALSE	canonical	2	5	junction_9	6.99205898780101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAAAAAGGTGAAACCC	-151006338	False	NA	65	True	NA	NA	NA	151006902	150996753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002707_151006311
transcript_70151.known	chr3	-	5347	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.87442304278158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	-196498445	True	NA	-16	True	AATAAA	-17	NA	196503768	196468782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
transcript_70154.nic	chr3	-	1139	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-82	18712	-82	-15735	5prime_fragment	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAAAAAAGACAGGC	NA	False	NA	-17	True	AATACA	-27	NA	196503850	196487494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_70156.nnic	chr3	-	1839	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	-40	-26799	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGTCTCTGTGTGT	NA	False	NA	2	True	AATAAA	-25	NA	196503808	196498558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_196499462_196502872
transcript_70160.nic	chr3	-	1649	4	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	36.2859017617954	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567597	True	NA	-5	True	AATAAA	-25	NA	196568529	196554176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196554808_196560995_196561492_196566876_196567308_196568438
transcript_70161.known	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	35.6495285928003	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567622	True	NA	-5	True	AATAAA	-25	NA	196568554	196554176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
transcript_70165.nic	chr3	-	1578	4	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	38.2186690854963	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567619	True	NA	-5	True	AATAAA	-25	NA	196568551	196554176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196554808_196560995_196561492_196566889_196567308_196568518
transcript_70168.nnic	chr3	-	1189	3	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	31.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567648	True	NA	-5	True	AATAAA	-25	NA	196568580	196554176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196554808_196560995_196561492_196568518
transcript_70175.known	chr3	-	683	2	FSM	ENSG00000185798.8	ENST00000429115.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCAAAACTGTTTTTC	-196567649	True	NA	-16	True	AATAAA	-14	NA	196568581	196554187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196554808_196568518
transcript_70176.known	chr3	-	348	2	FSM	ENSG00000232065.2	ENST00000441644.2	461	2	113	0	113	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTACCACATTTCCAC	-196632574	False	NA	NA	False	AATAAA	-29	NA	196632587	196631497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196631646_196632387
transcript_70177.known	chr3	-	2158	3	FSM	ENSG00000174007.9	ENST00000409690.5	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTCTACCTGTTC	-196712080	True	NA	NA	False	AATAAA	-15	NA	196712250	196706276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196707913_196708527_196708728_196711928
transcript_70183.known	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	396.615963145991	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-196932691	True	NA	7	True	NA	NA	NA	196942560	196935433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
transcript_70184.known	chr3	-	1133	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	385.344867186092	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTTCTTTGACAACA	-196932571	True	NA	62	True	NA	NA	NA	196942440	196936776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
transcript_70185.known	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	412.17067662155	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-196942365	False	NA	-8	True	AATAAA	-16	NA	196942377	196935405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
transcript_70186.known	chr3	-	2220	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	377.345406167288	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTTGTTGCTGCCTGTT	-196942582	False	NA	-11	True	AATAAA	-13	NA	196942594	196935408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
transcript_70187.known	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	22.8619042659763	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-196932659	True	NA	-8	True	AATAAA	-16	NA	196942528	196935405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
transcript_7019.known	chr1	+	3025	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_2	48.5768904492073	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005185	True	NA	13	True	ATTAAA	-16	NA	151008448	151035713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_70196.known	chr3	-	1096	3	FSM	ENSG00000114503.11	ENST00000468923.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATCTTGGCCATGT	-196932654	True	NA	6	True	ATTAAA	-34	NA	196942523	196936832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937649_196939250_196939433_196942425
transcript_70198.known	chr3	+	870	1	FSM	ENSG00000270170.2	ENST00000602845.2	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGCTGGGACTTG	196932528	True	NA	20	True	AATAAA	-20	NA	196942673	196943543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_196942700_196943500
transcript_7020.nic	chr1	+	2904	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	60.4523762636207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005216	True	NA	13	True	ATTAAA	-16	NA	151008479	151035713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_70200.known	chr3	-	4853	25	FSM	ENSG00000075711.21	ENST00000667157.1	4853	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	60.2305754764324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	-197296973	True	NA	1	True	ATTAAA	-25	NA	197298612	197042559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_70201.known	chr3	-	4912	25	FSM	ENSG00000075711.21	ENST00000357674.9	4912	25	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_24	63.1763267679349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAAGGATGCCATTTA	-197296967	True	NA	-52	True	NA	NA	NA	197298606	197042612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
transcript_70203.known	chr3	-	2605	17	FSM	ENSG00000075711.21	ENST00000471733.5	2605	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	59.1405899108218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-197296992	True	NA	NA	False	NA	NA	NA	197298631	197080477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_70204.nic	chr3	-	2466	9	ISM	ENSG00000075711.21	ENST00000671246.1	4146	22	102688	-5	4538	0	3prime_fragment	FALSE	canonical	3	40	junction_8	106.835153390633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	-197081106	False	NA	-17	True	AATAAA	-7	NA	197081120	197042937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050
transcript_70207.nic	chr3	-	1224	5	ISM	ENSG00000075711.21	ENST00000471733.5	2605	17	-14	113347	-14	512	5prime_fragment	FALSE	canonical	3	40	junction_4	89.1178994366452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATTAACATCATCTTTA	-197297006	True	NA	NA	False	NA	NA	NA	197298645	197193824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_7021.nic	chr1	+	2854	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	63.2624603448909	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005197	True	NA	13	True	ATTAAA	-16	NA	151008460	151035713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_70212.known	chr3	-	3527	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	57.0864006822741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197555968	197509782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
transcript_70214.known	chr3	-	3455	7	FSM	ENSG00000161267.12	ENST00000392378.6	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	12.4152683776425	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197556048	197509782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_70216.known	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	56.1854073581388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	197555972	197512167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
transcript_70222.nic	chr3	-	1103	9	FSM	ENSG00000214135.9	ENST00000689038.1	1118	9	-24	39	0	0	multi-exon	FALSE	canonical	3	11	junction_1	47.5598307398166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGATCCCACAAATAAA	-197623521	True	NA	-41	True	NA	NA	NA	197627908	197611571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197611623_197613224_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_70224.nnic	chr3	-	1354	9	NNC	ENSG00000214135.9	novel	2435	7	NA	NA	0	-1026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7655440540943	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCTGTCTAACTGAAA	-197623521	True	NA	-17	True	AATAAA	-14	NA	197627908	197612597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_197612780_197613104_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_70225.nnic	chr3	-	1294	9	NNC	ENSG00000214135.9	novel	2435	7	NA	NA	0	-1086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7655440540943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAATGCATTATTATTT	-197623521	True	NA	-77	True	AATAAA	-19	NA	197627908	197612657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_197612780_197613104_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_70234.known	chr3	-	1552	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	3	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	38.0879754981939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	-197623519	True	NA	NA	False	AATAAA	-20	NA	197627906	197614026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_70238.nic	chr3	-	1258	5	ISM	ENSG00000214135.9	ENST00000686003.1	1398	7	-15	5150	0	566	5prime_fragment	FALSE	canonical	3	36	junction_2	49.1782472237472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCTACTAAAACCAACC	-197623521	True	NA	NA	False	AATAGA	-16	NA	197627908	197619173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
transcript_7024.known	chr1	+	2788	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	53.8392669588532	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005219	True	NA	13	True	ATTAAA	-16	NA	151008482	151035713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_70240.known	chr3	+	6733	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	24.4792641842029	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	197747074	True	NA	5	True	AATAAA	-17	NA	197749882	197787596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_70244.nnic	chr3	+	2166	15	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	2	-3509	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	47.5957145215441	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTCAGAAGGCTCCC	197783379	True	NA	NA	False	AATAAA	-18	NA	197791236	197855930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197855450
transcript_70245.known	chr3	-	1981	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	10.4899952335547	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-197949269	True	NA	-1	True	AATAAA	-24	NA	197949925	197889076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
transcript_70250.known	chr3	+	553	5	FSM	ENSG00000182899.17	ENST00000448864.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	4178	junction_1	5052.48223648535	3863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	197796428	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197950300_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_7026.known	chr1	+	732	6	FSM	ENSG00000143363.17	ENST00000462440.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	76.3947642184986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAAGTACCCACCCTA	151005186	True	NA	NA	False	NA	NA	NA	151008449	151033855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151027232_151027328_151028785_151028945_151033805
transcript_70263.known	chr3	+	1234	5	FSM	ENSG00000182899.17	ENST00000647248.2	1234	5	0	0	0	0	multi-exon	FALSE	canonical	3	8323	junction_1	3384.83606508498	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTGTATGGTTTTTT	197796428	True	NA	16	True	AATAAA	-16	NA	197950189	197956610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197950222_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_70264.known	chr3	+	442	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	5942.74433132539	29547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	197796444	True	NA	14	True	AATAAA	-25	NA	197950205	197955817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
transcript_70272.nnic	chr3	+	981	5	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4205	350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5435032565657	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTGTCTTTGCTAT	NA	False	NA	9	True	ATTAAA	-19	NA	198157491	198170409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_198157670_198162331_198162446_198167675_198167872_198169784_198169873_198170004
transcript_70274.nnic	chr3	+	1996	5	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4205	1874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.5552698640608	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGGTCTGTGCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	198157491	198171933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_198157670_198162331_198162446_198167675_198167872_198169784_198169873_198170513
transcript_70275.nnic	chr3	+	1113	4	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4205	350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.0800688297608	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTGTCTTTGCTAT	NA	False	NA	9	True	ATTAAA	-19	NA	198157491	198170409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_198157670_198162331_198162446_198167675_198167872_198169784
transcript_70277.known	chr4	+	2872	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	5.24933858267454	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	49648	True	NA	NA	False	AATAAA	-23	NA	53320	88208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53492_59429_59557_60057_60154_85730
transcript_70278.known	chr4	+	747	3	FSM	ENSG00000272602.6	ENST00000502981.2	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATACGTAAGGTGAG	49656	True	NA	NA	False	NA	NA	NA	53328	60514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53492_59429_59557_60057
transcript_70279.known	chr4	+	1999	2	FSM	ENSG00000272602.6	ENST00000608255.2	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTATTATTTTTCTT	49613	True	NA	NA	False	AATAAA	-23	NA	53285	87523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53492_85730
transcript_7028.nic	chr1	+	2527	5	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_2	68.7509090848987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005136	True	NA	13	True	ATTAAA	-16	NA	151008399	151035713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151008672_151017811_151017905_151027232_151027328_151028785_151028945_151033805
transcript_70285.nnic	chr4	+	1399	5	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-16	-27990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.3704261489394	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCAAATGAAAATTGT	120905	True	NA	NA	False	ATTAAA	-16	NA	124484	134711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_124674_124822_125297_126847_126922_127007_127126_134167
transcript_70287.nnic	chr4	+	942	4	NNC	ENSG00000250312.8	novel	3647	4	NA	NA	-33	-27990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.1070255914995	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCAAATGAAAATTGT	120888	True	NA	NA	False	ATTAAA	-16	NA	124467	134711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_124674_126847_126922_127007_127126_134167
transcript_7029.known	chr1	+	2238	4	FSM	ENSG00000143363.17	ENST00000368935.1	2238	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	84.9745059807156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005266	True	NA	13	True	ATTAAA	-16	NA	151008529	151035713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151027232_151027328_151033805
transcript_70290.nnic	chr4	+	1565	4	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-33	-27990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.8193010820572	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCAAATGAAAATTGT	120888	True	NA	NA	False	ATTAAA	-16	NA	124467	134711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_125297_126847_126922_127007_127126_134167
transcript_70296.nnic	chr4	+	1653	3	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-33	-28882	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTATAATGATTTGATA	120888	True	NA	NA	False	AATAAA	-15	NA	124467	133819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_125297_126847_127119_133266
transcript_70298.known	chr4	+	2598	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	209618	True	NA	92	True	TATAAA	-15	NA	212609	255985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_212782_253559
transcript_70299.nnic	chr4	-	680	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-31	51609	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	45.2621990922521	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTGGATTTTAAGATGT	-299902	True	NA	NA	False	AATAAA	-20	NA	305505	219065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_219325_295437_295534_296028_296156_305307
transcript_7030.known	chr1	-	1174	6	FSM	ENSG00000197622.13	ENST00000492796.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	60.310529760565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAAGCTGGCTTT	-151052859	True	NA	NA	False	NA	NA	NA	151059615	151052945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
transcript_70300.nnic	chr4	-	698	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-31	37667	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_1	45.2621990922521	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATTTATTTGATGATA	-299902	True	NA	1	True	AATAAA	-18	NA	305505	233007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_233285_295437_295534_296028_296156_305307
transcript_70301.nnic	chr4	-	1464	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-31	23664	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	17.4610678049451	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATACTCTTTCCCT	-299902	True	NA	-8	True	TTTAAA	-6	NA	305505	247010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_70310.known	chr4	+	12601	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	9.0921211313239	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	337441	True	NA	17	True	AATAAA	-20	NA	337813	384868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_337987_343781_343909_344334_344431_372663
transcript_70319.known	chr4	-	1679	5	FSM	ENSG00000182903.16	ENST00000515578.5	1679	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.680678416912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	-465618	False	NA	NA	False	NA	NA	NA	474051	425814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_427120_435769_435880_437445_437512_472574_472702_473980
transcript_70322.known	chr4	-	1423	4	FSM	ENSG00000251595.7	ENST00000514396.5	1423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.382490938237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	-465618	False	NA	NA	False	NA	NA	NA	474051	425814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_426974_437445_437512_472574_472702_473980
transcript_70324.nnic	chr4	-	502	4	NIC	ENSG00000182903.16	novel	935	7	NA	NA	-16	-225	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	133.382490938237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATACCTTCAGAGTGTT	-465750	True	NA	NA	False	AATAAA	-36	NA	474183	427013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_427120_437445_437512_472574_472702_473980
transcript_70325.nnic	chr4	-	599	4	NNC	ENSG00000182903.16	novel	664	3	NA	NA	-16	-146	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	123.834118436273	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAATGTAATGCACGT	-465750	True	NA	-13	True	AATAAA	-26	NA	474183	444228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_444433_467616_467682_472574_472702_473980
transcript_70329.known	chr4	-	1815	3	FSM	ENSG00000251595.7	ENST00000451020.6	1815	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAAATGAGTTTTT	-465696	True	NA	NA	False	AATAAA	-21	NA	474129	425434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_426974_472574_472702_473980
transcript_70330.known	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	25.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-465734	True	NA	NA	False	CATAAA	-1	NA	474167	444082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_444433_472574_472702_473980
transcript_70331.nnic	chr4	-	650	3	NNC	ENSG00000251595.7	novel	1815	3	NA	NA	-54	-30234	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	133.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGTGATCATGACT	-465750	True	NA	NA	False	AATAAA	-35	NA	474183	456048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_456369_472574_472702_473980
transcript_70332.nnic	chr4	-	686	3	NNC	ENSG00000251595.7	novel	1815	3	NA	NA	-54	-41511	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	125.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTGTATGATCCGAC	-465750	True	NA	NA	False	ATTAAA	-20	NA	474183	467325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_467682_472574_472702_473980
transcript_70334.known	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	30.2474746420626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	496002	True	NA	12	True	AATAAA	-20	NA	499209	540200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_70335.known	chr4	+	3019	13	FSM	ENSG00000174227.16	ENST00000504346.5	3019	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	38.6266855079922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGTATCATATTTTC	496029	True	NA	NA	False	AATAAA	-16	NA	499236	539528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_499299_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_7034.known	chr1	-	3006	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	11.4755174175285	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCACAGTAATCATTG	-151052866	True	NA	-16	True	AATAAA	-14	NA	151059622	151050984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
transcript_70342.nnic	chr4	+	1759	8	NIC	ENSG00000174227.16	novel	3203	13	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	42.7808845354167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	496024	True	NA	NA	False	AATAAA	-17	NA	499231	539529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_533817_533982_539152
transcript_70344.known	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	38.9025670389786	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	496013	True	NA	NA	False	AATAAA	-17	NA	499220	539529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_70350.nnic	chr4	-	1033	4	Genic_Genomic	ENSG00000272927.1	novel	737	1	NA	NA	-2266	-340	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTGCTGCACCTGT	-663807	True	NA	NA	False	AGTAAA	-15	NA	664211	661548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr4_-_662282_662538_662605_663201_663310_664085
transcript_70358.known	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	7727.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-636135	True	NA	-31	True	AATAAA	-19	NA	674330	672437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_674211
transcript_70359.known	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	12319	junction_3	1462.88330209746	6500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-636081	True	NA	-29	True	AATAAA	-21	NA	674276	672435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_673911_673967_674211
transcript_70360.known	chr4	-	393	3	FSM	ENSG00000169020.10	ENST00000515202.5	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	15251	junction_2	159	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-674109	False	NA	-29	True	AATAAA	-21	NA	674121	672435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_673911
transcript_70361.known	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7778	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-673809	False	97	-31	True	AATAAA	-19	NA	673821	672437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_673506
transcript_70362.known	chr4	+	5685	11	FSM	ENSG00000185619.18	ENST00000362003.9	5685	11	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_4	16.8712773671705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAACAATTCTGAAACTC	NA	False	NA	NA	False	AGTAAA	-1	NA	705764	770640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_705971_730629_730669_730969_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_70364.known	chr4	+	1175	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	7.93025150224688	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	703339	True	NA	9	True	AATAAA	-22	NA	705783	734479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_705971_730629_730669_730969_731111_733671
transcript_70369.known	chr4	-	534	2	FSM	ENSG00000249592.7	ENST00000507446.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAAAACGCCCTTCCAG	-780700	True	NA	NA	False	NA	NA	NA	781830	767140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_767616_781771
transcript_7037.known	chr1	-	2379	4	FSM	ENSG00000197622.13	ENST00000483763.5	2379	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	9.56846672960488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGATATTTTTCTC	-151052818	True	NA	NA	False	NA	NA	NA	151059574	151052113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151053328_151054230_151054322_151055015_151055994_151059478
transcript_70371.known	chr4	+	1899	1	FSM	ENSG00000185619.18	ENST00000620529.1	1899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAAAGTGTTTCTGGCT	768167	False	NA	10	True	AATAAA	-17	NA	768188	770087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_768200_770100
transcript_70372.known	chr4	+	1652	11	FSM	ENSG00000185619.18	ENST00000470161.6	1652	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.3339547973503	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	703339	True	NA	23	True	TATAAA	-26	NA	705783	766608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_705971_730629_730669_730951_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_70375.known	chr4	-	2335	10	FSM	ENSG00000178222.13	ENST00000382968.9	2335	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.16595429884644	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCATTTTGTGGCTTG	-1113445	True	NA	NA	False	GATAAA	-20	NA	1113562	1071477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081418_1081468_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1108342_1108405_1113355
transcript_70376.known	chr4	-	1579	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	3.26190128606002	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGGCTGTCCCCACA	-1172300	False	283	-4	True	AATAAA	-23	NA	1172583	1166931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
transcript_70377.nic	chr4	-	2350	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_9	337.169408275044	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1248688	False	NA	-18	True	AATAAA	-15	NA	1248740	1211447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_70378.nic	chr4	-	2352	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	143	junction_9	398.208767133802	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCGTGCCCAGCATCTA	-1248688	False	NA	-19	True	AATAAA	-14	NA	1248740	1211448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_1212427_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_70381.known	chr4	+	2182	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_6	40.051334247438	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	1281835	True	NA	37	True	AATAAA	-45	NA	1289890	1340137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_70383.known	chr4	+	1607	9	FSM	ENSG00000090316.16	ENST00000510794.5	1607	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	237.436175634632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGATGCTTCTGAA	NA	False	NA	NA	False	AAAACA	-30	NA	1309442	1339384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1309713_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_70385.known	chr4	+	2058	8	FSM	ENSG00000090316.16	ENST00000264750.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	249.422762164391	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	1281835	True	NA	36	True	AATAAA	-44	NA	1289890	1340136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_70388.known	chr4	+	1001	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	268.913658179639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	1281858	True	NA	NA	False	NA	NA	NA	1289913	1339179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_70391.nic	chr4	+	1524	3	ISM	ENSG00000163945.19	ENST00000679192.1	3869	15	5	37087	5	-4433	5prime_fragment	FALSE	canonical	2	8	junction_1	18	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACTGTGAACTTACAGA	1346981	True	NA	NA	False	NA	NA	NA	1347063	1350781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_1347230_1348089_1348190_1349523
transcript_70392.known	chr4	-	579	2	FSM	ENSG00000244459.3	ENST00000466692.2	853	2	274	0	211	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCTGGTGTGCAGT	-1580083	False	170	-7	True	NA	NA	NA	1580253	1574061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1574545_1580157
transcript_70393.known	chr4	+	2799	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	106.258092502276	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGCCGCTCTGGTCT	1707792	True	NA	39	True	AATAAA	-20	NA	1721520	1745171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_70395.known	chr4	+	1732	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	249.128245393936	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	1707771	True	NA	31	True	AATAAA	-12	NA	1721499	1745163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_70396.known	chr4	+	914	2	FSM	ENSG00000013810.21	ENST00000652002.1	914	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACATCACTTCAGACTAA	1712792	True	NA	NA	False	AAAACA	-2	NA	1712857	1715945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1713166_1715339
transcript_70397.known	chr4	+	125	1	FSM	ENSG00000249784.1	ENST00000503991.1	125	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACACAACTTGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	1974635	1974760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1974600_1974800
transcript_70399.known	chr4	-	2198	11	FSM	ENSG00000185049.16	ENST00000382882.9	2198	11	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_6	31.8785194135487	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	-2002897	True	NA	-15	True	ATTAAA	-21	NA	2008974	1982722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
transcript_70410.nic	chr4	-	523	2	ISM	ENSG00000185049.16	ENST00000443203.5	553	3	-10	15322	-8	-3072	5prime_fragment	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGTAAGAGTGTCTT	-2002905	True	NA	-9	True	TTTAAA	-16	NA	2008982	2006909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_2007200_2008749
transcript_70414.known	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	53.1977443130815	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240366	True	NA	NA	False	NA	NA	NA	2242121	2228348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
transcript_70418.known	chr4	-	5738	27	FSM	ENSG00000214367.9	ENST00000672739.1	5738	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.5012397712168	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATACCACTGCACTCC	NA	False	NA	NA	False	NA	NA	NA	2242276	2078997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2079360_2080957_2081159_2081632_2081744_2085612_2085745_2095850_2095934_2123501_2123618_2128112_2128228_2129178_2129257_2131232_2131291_2156787_2156854_2157857_2157912_2159154_2159212_2170678_2170775_2171097_2171182_2173954_2174020_2174690_2174752_2179307_2179466_2193203_2193317_2198523_2198718_2207986_2208488_2213046_2213127_2229098_2229244_2231834_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
transcript_70419.known	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	64.9206246119059	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240378	True	NA	NA	False	NA	NA	NA	2242133	2228348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
transcript_7042.known	chr1	+	2085	2	FSM	ENSG00000143443.10	ENST00000368926.6	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCAGTCACTGTTCTG	151047332	True	NA	NA	False	AATACA	-38	NA	151047750	151051420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151048853_151050437
transcript_70423.known	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	12.8436754864019	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-2260067	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
transcript_70425.known	chr4	+	2921	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	0	0	0	0	multi-exon	FALSE	canonical	1	251	junction_4	200.045709062418	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	2461613	True	NA	19	True	AATAAA	-20	NA	2469105	2515857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_70427.known	chr4	+	855	8	FSM	ENSG00000063978.16	ENST00000502316.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	280.496207548301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAGTATTCAGAGC	2461604	True	NA	NA	False	AAAAAG	-29	NA	2469096	2513811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2469230_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_7043.known	chr1	+	2483	2	FSM	ENSG00000213190.4	ENST00000368921.5	2483	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAAACTCATGCTCCAT	151051541	True	NA	NA	False	AATAAA	-14	NA	151060396	151069544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151060554_151067218
transcript_70432.known	chr4	-	2006	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	125.164531717256	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2750811	True	NA	6	True	AATAAA	-34	NA	2756331	2741647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
transcript_70436.known	chr4	+	3107	16	FSM	ENSG00000087274.19	ENST00000513328.6	3107	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	265.654110953824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGCTTTCTTCTTT	2835559	True	NA	NA	False	NA	NA	NA	2843972	2929307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_70441.nic	chr4	+	3887	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-34	0	intron_retention	FALSE	canonical	3	597	junction_14	104.515622306536	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835497	True	NA	13	True	AATAAA	-14	NA	2843910	2930062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_70442.known	chr4	+	4045	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_10	226.659514943198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	2835443	True	NA	24	True	AATAAA	-25	NA	2843856	2930073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_70447.known	chr4	+	546	2	FSM	ENSG00000087274.19	ENST00000540541.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTAGCTTAGGCTGG	2835575	True	NA	NA	False	ATTAAA	-2	NA	2843988	2876405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2844025_2875895
transcript_70453.known	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	234.762335494147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	-2927333	True	NA	21	True	AATAAA	-1	NA	2934816	2930582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_70459.known	chr4	-	1717	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_12	122.397122333638	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	-2927342	True	NA	-9	True	AATAAA	-17	NA	2934825	2930566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_70463.nic	chr4	-	1865	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	-26	0	intron_retention	FALSE	canonical	3	495	junction_11	126.257574848448	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	-2927377	True	NA	-3	True	AATAAA	-23	NA	2934860	2930560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_70474.known	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	254.784854954233	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-2927351	True	NA	-7	True	TTTAAA	-4	NA	2934834	2930610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_70488.known	chr4	-	1776	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_8	88.6665664159834	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	-2926464	False	NA	-3	True	AATAAA	-23	NA	2933947	2930560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_70489.known	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_11	10.8222505638354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2956999	True	NA	-20	True	TATAAA	-6	NA	2963406	2937935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_7049.known	chr1	+	1913	7	FSM	ENSG00000163156.12	ENST00000368905.9	1913	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	48.4733603814164	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTATCTCTGGCATC	151161290	True	NA	NA	False	AATAAA	-21	NA	151166143	151170296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_70491.known	chr4	-	2535	17	FSM	ENSG00000087269.16	ENST00000398071.4	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	35.7088924499206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	-2956926	True	NA	-14	True	AATAGA	-18	NA	2963333	2938112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2938328_2939538_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_70495.known	chr4	-	10446	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	0	0	0	multi-exon	TRUE	canonical	3	759	junction_5	25.3964484099004	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTCTTTGATCCAT	-3526726	True	NA	-2	True	NA	NA	NA	3532422	3503611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
transcript_7050.nnic	chr1	+	837	7	NNC	ENSG00000163156.12	novel	869	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	193.204914246219	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	151165983	False	NA	16	True	AATAAA	-25	NA	151166011	151169138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168193_151168339_151168985
transcript_70504.nnic	chr4	+	630	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	23	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	14	True	AATAAA	-16	NA	3927590	3933038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_3927695_3927845_3927996_3932662
transcript_70506.nnic	chr4	-	882	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5552	-6196	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCCGGGCACAGTGG	-3929767	False	NA	NA	False	AATAAA	-16	NA	3929826	3921382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_3921783_3924070_3924268_3929541
transcript_70507.nnic	chr4	-	743	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5636	-6196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCCGGGCACAGTGG	-3929851	False	NA	NA	False	AATAAA	-16	NA	3929910	3921382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_3921783_3924070_3924268_3929764
transcript_70509.nnic	chr4	-	790	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5552	-6288	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGTGTGTGTGTGTGTG	-3929767	False	NA	NA	False	AATAAA	-5	NA	3929826	3921474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_3921783_3924070_3924268_3929541
transcript_70512.known	chr4	-	624	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGCGACACCTGGA	-3954570	True	NA	NA	False	NA	NA	NA	3955363	3942851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_3943373_3953110_3953174_3955323
transcript_70514.nnic	chr4	+	677	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	3927634	False	NA	14	True	AATAAA	-16	NA	3927694	3933038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_3927996_3932662
transcript_70517.nnic	chr4	-	806	3	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	-29	6146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-4107531	True	NA	-29	True	AATAAA	-19	NA	4107612	4101133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_4101439_4102160_4102329_4107279
transcript_70518.nnic	chr4	-	645	2	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	-29	6153	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAATTATTTTT	-4107531	True	NA	-22	True	AATAAA	-26	NA	4107612	4101126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_4101439_4107279
transcript_70519.known	chr4	-	1737	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	102.172342147961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246543	True	NA	-1	True	AATAAA	-17	NA	4248212	4235541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
transcript_7052.known	chr1	+	869	7	FSM	ENSG00000163156.12	ENST00000368902.1	869	7	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	174.750298044572	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	151161225	True	NA	16	True	AATAAA	-25	NA	151166078	151169138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151166253_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_70520.known	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	21.4709105535839	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246554	True	NA	-1	True	AATAAA	-17	NA	4248223	4235541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_70521.nnic	chr4	-	2076	5	NNC	ENSG00000132406.12	novel	1243	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	99.7606510604256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246566	True	NA	-1	True	AATAAA	-17	NA	4248235	4235541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_4237078_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_70522.known	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	28.7573930376345	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282369	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_70527.nnic	chr4	-	1524	9	NIC	ENSG00000145220.14	novel	1554	10	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_8	135.629089800087	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282393	True	NA	0	True	AATAAA	-26	NA	4290178	4267700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4290035
transcript_70529.nic	chr4	-	881	7	ISM	ENSG00000145220.14	ENST00000343470.9	1554	10	-54	6897	-54	-6894	5prime_fragment	FALSE	canonical	3	395	junction_1	26.1050229308887	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAGAAAGAACTAAAG	-4282423	True	NA	50	True	AATAAA	-38	NA	4290208	4274597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_70531.known	chr4	+	2886	8	FSM	ENSG00000168826.16	ENST00000337872.9	2886	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35679610833356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	4289142	True	NA	NA	False	AATAAA	-18	NA	4290250	4321783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_70534.nic	chr4	+	1003	2	ISM	ENSG00000168826.16	ENST00000515012.5	2380	6	-30	20601	-30	-1477	5prime_fragment	FALSE	canonical	3	42	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGAGTTAAGTGATTC	4289112	True	NA	NA	False	NA	NA	NA	4290220	4300797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_4290353_4299926
transcript_70538.known	chr4	-	2158	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	18.3098334236006	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	-4536197	True	NA	NA	False	AATAAA	-20	NA	4542048	4418967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_70550.nnic	chr4	+	1096	7	NNC	ENSG00000168824.15	novel	3291	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.1901891119183	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	4385293	True	NA	14	True	AATAAA	-14	NA	4386523	4419058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234_4417444_4417818_4417928_4418783
transcript_70552.known	chr4	+	2650	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55.4739578541138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4386255	4419058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_70555.known	chr4	+	1483	6	FSM	ENSG00000168824.15	ENST00000513829.5	1486	6	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_5	56.176151523578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGCTGCCCAGTGG	4386988	False	NA	11	True	AATAAA	-11	NA	4387038	4419055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234_4417928_4418783
transcript_70556.known	chr4	+	2254	5	FSM	ENSG00000168824.15	ENST00000433139.6	2254	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	30.7652401258303	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	4385307	True	NA	-45	True	NA	NA	NA	4386537	4418999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_70561.known	chr4	+	4172	9	FSM	ENSG00000168824.15	ENST00000421177.6	4172	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	65.1525853285961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4348139	4419058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4348472_4380982_4381074_4385059_4385202_4385472_4385556_4385856_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_70565.nnic	chr4	+	1601	5	NNC	ENSG00000247708.8	novel	6201	5	NA	NA	-1	-26173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.1803398874989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAAAGAGGG	4539512	True	NA	NA	False	NA	NA	NA	4542141	4761186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_4542626_4544737_4544908_4648976_4649110_4649369_4649543_4760545
transcript_70570.known	chr4	+	1405	3	FSM	ENSG00000247708.8	ENST00000512438.6	1405	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATATATATGTGAAATAT	4539569	True	NA	NA	False	NA	NA	NA	4542198	4592031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4542476_4544737_4544908_4591073
transcript_70571.nnic	chr4	+	2007	5	Fusion	ENSG00000280310.1_ENSG00000247708.8	novel	3048	5	NA	NA	-4	19	multi-exon	FALSE	canonical	2	8	junction_3	8.5841423566947	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCAGGTAGTTCCT	4539528	True	NA	NA	False	ATTAAA	-21	NA	4542157	4821471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr4_+_4542626_4544737_4544908_4648976_4649110_4649372_4649543_4820405
transcript_70572.known	chr4	+	1048	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCTTCATAAATTAC	NA	False	NA	NA	False	ATTAAA	-2	NA	4820404	4821452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4820400_4821500
transcript_70573.nnic	chr4	-	1139	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	32.3303263206544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018718	True	NA	0	True	AATAAA	-21	NA	5019493	5014585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
transcript_70574.known	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3.55902608401044	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018683	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
transcript_70577.known	chr4	-	553	2	FSM	ENSG00000170891.11	ENST00000506508.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATGTTTTTATTACTG	-5018662	True	NA	NA	False	NA	NA	NA	5019437	5014826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_5015235_5019292
transcript_70585.nic	chr4	+	740	3	ISM	ENSG00000013288.9	ENST00000504248.5	2968	19	-9	42538	-9	-31225	5prime_fragment	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGGTTGTTGTGAGTA	6574735	True	NA	11	True	GATAAA	-25	NA	6575179	6578816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_6575349_6576577_6576725_6578392
transcript_7059.known	chr1	+	1158	2	FSM	ENSG00000163154.6	ENST00000368910.4	1158	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGGCTCAATGTTTAAT	151156630	False	NA	NA	False	AATAAA	-15	NA	151156648	151159749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151156723_151158665
transcript_70590.known	chr4	+	2049	3	FSM	ENSG00000179010.16	ENST00000320912.8	2049	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	213	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	NA	False	NA	20	True	AATAAA	-21	NA	6640090	6642729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6640709_6640827_6641259_6641729
transcript_70591.known	chr4	+	563	3	FSM	ENSG00000179010.16	ENST00000507420.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGAGCCTTTTGTTTT	6627065	True	NA	NA	False	NA	NA	NA	6640685	6641791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6640756_6640827_6641259_6641729
transcript_70592.known	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	6627064	True	NA	20	True	AATAAA	-21	NA	6640684	6642729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6641259_6641729
transcript_70593.known	chr4	-	422	2	FSM	ENSG00000251580.3	ENST00000515205.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTCGAGGTGAACATAT	-6673567	False	NA	-13	True	AATAAA	-19	NA	6673830	6670724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6671000_6673683
transcript_70594.known	chr4	-	406	2	FSM	ENSG00000251580.3	ENST00000513179.1	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGTTTCGAGGTGAACA	-6673560	False	NA	-16	True	AATAAA	-16	NA	6673823	6670727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6670994_6673683
transcript_70596.nnic	chr4	-	1597	2	NNC	ENSG00000178988.11	novel	1578	2	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704983	True	NA	31	True	AATAAA	-16	NA	6709879	6707700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_6708644_6709225
transcript_70597.known	chr4	-	1578	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704969	True	NA	31	True	AATAAA	-16	NA	6709865	6707700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6708644_6709230
transcript_70598.known	chr4	-	2127	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704931	True	NA	31	True	AATAAA	-16	NA	6709827	6707700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6707700_6709800
transcript_706.known	chr1	+	949	5	FSM	ENSG00000116288.13	ENST00000465354.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	1587	junction_1	1359.42064865883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCATTTTAAGATCCAT	7904227	True	NA	NA	False	NA	NA	NA	7961747	7971521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893
transcript_7060.known	chr1	+	862	5	FSM	ENSG00000163156.12	ENST00000497147.1	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_3	21.3834047803431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACAATGGGTGCTGAG	151166647	False	NA	-11	True	NA	NA	NA	151166668	151169111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_70601.known	chr4	-	1111	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGAGTGGATCTCATG	-6986897	True	NA	-7	True	ATTAAA	-14	NA	6987036	6985925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6985900_6987000
transcript_70602.known	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	13.9124245031395	670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-7051333	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
transcript_70607.known	chr4	-	2253	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	11.6372507722543	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	-8427531	True	NA	NA	False	NA	NA	NA	8428486	8366960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_70617.known	chr4	+	2163	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	20.3656573672445	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	8591460	True	NA	11	True	ATTAAA	-18	NA	8592764	8619752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_70618.known	chr4	+	2136	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	32.5113465473362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	8591451	True	NA	8	True	ATTAAA	-15	NA	8592755	8619749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_70620.nnic	chr4	+	596	2	Genic_Genomic	ENSG00000284648.1	novel	219	1	NA	NA	-77	6144	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTGAATTTTATTT	9532037	True	NA	NA	False	AATAAA	-14	NA	9532351	9538791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr4_+_9532648_9538491
transcript_70621.known	chr4	-	3142	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	423.642616277601	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	-10116727	False	NA	-10	True	ATTAAA	-15	NA	10116949	10074339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
transcript_70626.known	chr4	-	1691	12	FSM	ENSG00000071127.17	ENST00000502702.5	1691	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	624.151973441095	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGCATAACTAAAA	-10116505	False	NA	-2	True	AATAAA	-17	NA	10116727	10075148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_70629.nic	chr4	+	707	3	ISM	ENSG00000249631.7	ENST00000668579.1	1270	6	99766	0	51805	0	3prime_fragment	FALSE	canonical	1	2	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGTCTGTGCTATTT	11822158	True	NA	NA	False	AATAAA	-18	NA	11822224	11823906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_11822475_11823038_11823209_11823619
transcript_70633.known	chr4	-	1785	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	105.362542234527	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480737	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_70635.known	chr4	-	1787	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	141.967659438798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_70637.known	chr4	-	1679	7	FSM	ENSG00000157869.16	ENST00000630951.1	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	129.891514563329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_70639.known	chr4	-	1690	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	45.3051382908777	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480737	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_7064.known	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	356.367563058144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	-151181974	True	NA	-12	True	AATAAA	-14	NA	151190158	151176461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_70641.known	chr4	-	1551	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	119.095927722152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480728	True	NA	-11	True	AATAAA	-14	NA	13484331	13367723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_70643.nic	chr4	-	1646	6	ISM	ENSG00000157869.16	ENST00000338176.8	1787	8	4	7958	4	-7182	5prime_fragment	FALSE	canonical	3	287	junction_2	22.4641937313584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTAGTTTTAATTCCC	NA	False	NA	4	True	ATTAAA	-19	NA	13484361	13375682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_70648.known	chr4	-	10567	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	35.7188129701982	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTGGTAAGAATTTTA	-13623190	True	NA	-10	True	TATAAA	-21	NA	13627725	13568737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
transcript_70649.known	chr4	+	1121	8	FSM	ENSG00000048342.18	ENST00000514450.3	1121	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	15.6021976474012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	15469782	False	NA	9	True	ATTAAA	-37	NA	15469920	15511672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_70650.nic	chr4	+	960	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-4	28604	-4	0	5prime_fragment	FALSE	canonical	3	31	junction_2	5.8309518948453	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	15478516	True	NA	9	True	ATTAAA	-37	NA	15479211	15511672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_70651.known	chr4	+	1521	5	FSM	ENSG00000048342.18	ENST00000515124.6	1521	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	7.24568837309472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTCATATGGCTGTTT	15469726	True	NA	NA	False	AATAAA	-14	NA	15469864	15482259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15481196
transcript_70652.known	chr4	+	754	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	15478520	True	NA	NA	False	AATAAA	-18	NA	15479215	15481713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15479329_15480703_15480828_15481196
transcript_70654.known	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	110.804512543488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-15649374	True	NA	0	True	AATAAA	-28	NA	15655382	15605005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
transcript_70655.known	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_3	22.8569464277274	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-15649349	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
transcript_70658.known	chr4	+	1979	9	FSM	ENSG00000109743.11	ENST00000265016.9	1979	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.64005494464026	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGTCCAGAATTGTG	15702856	True	NA	NA	False	AATAAA	-29	NA	15703064	15732787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15703333_15705514_15705642_15707510_15707647_15711806_15711890_15715284_15715362_15715706_15715800_15718906_15718994_15722874_15722935_15731739
transcript_7066.known	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	1	321	junction_5	213.3678513741	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-151182013	True	NA	-3	True	TATAAA	-24	NA	151190197	151176303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_70666.known	chr4	+	635	4	FSM	ENSG00000237765.8	ENST00000504823.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	20.0388511535855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTATGAAACCTTAAGT	15681618	False	NA	NA	False	AATGAA	-35	NA	15681668	15688694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681785_15686235_15686463_15687000_15687149_15688550
transcript_70670.known	chr4	+	607	4	FSM	ENSG00000237765.8	ENST00000515697.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	75.5263015261718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATCAATAATTGAGCTA	15681718	False	NA	NA	False	AAAACA	-34	NA	15681732	15688613	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235_15686463_15687000_15687149_15688550
transcript_70676.known	chr4	+	578	4	FSM	ENSG00000237765.8	ENST00000503600.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	13.7679176187089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATTGAGCTAAACTTG	15679020	True	NA	NA	False	AAAACA	-40	NA	15681834	15688619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681969_15686235_15686463_15687000_15687149_15688550
transcript_70681.known	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	11.2249721603218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	15679046	True	NA	8	True	AATAAA	-14	NA	15681860	15688972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
transcript_70685.known	chr4	+	800	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	72.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACAGCTGCTGAAA	15678976	True	NA	NA	False	NA	NA	NA	15681790	15687462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235_15686463_15687000
transcript_70689.known	chr4	+	588	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	15678942	True	NA	-29	True	AATGAA	-2	NA	15681756	15686568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15684849_15684960_15686235
transcript_70690.known	chr4	+	431	3	FSM	ENSG00000237765.8	ENST00000510186.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTAAGTGCAAGAC	15679091	False	NA	NA	False	NA	NA	NA	15681905	15687141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681969_15686235_15686463_15687000
transcript_70692.known	chr4	+	748	3	FSM	ENSG00000237765.8	ENST00000513053.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAACTTATTGAT	15678991	True	NA	NA	False	ATTAAA	-18	NA	15681805	15687305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15682022_15686235_15686463_15687000
transcript_70693.known	chr4	+	444	3	FSM	ENSG00000237765.8	ENST00000507992.5	444	3	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	21	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATACAAGTCAACAGTC	15678981	True	NA	NA	False	GATAAA	-21	NA	15681795	15686396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681969_15684849_15684960_15686235
transcript_70696.nic	chr4	+	499	2	ISM	ENSG00000237765.8	ENST00000510920.5	662	3	-5	706	-5	0	5prime_fragment	FALSE	canonical	3	53	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15681606	True	NA	9	True	AATAAA	-16	NA	15681656	15686606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_15681785_15686235
transcript_70697.known	chr4	+	4287	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	15679012	True	NA	4	True	AATAAA	-15	NA	15681826	15690447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235
transcript_70698.known	chr4	+	1027	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	15678942	True	NA	NA	False	AATATA	-25	NA	15681756	15687050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681969_15686235
transcript_70699.known	chr4	+	639	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15678939	True	NA	9	True	AATAAA	-16	NA	15681753	15686606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15682022_15686235
transcript_70700.nnic	chr4	-	928	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-51	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15681672	True	NA	-7	True	ATTAAA	-42	NA	15681730	15667563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_15668041_15681279
transcript_70701.nnic	chr4	-	855	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-51	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	179	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15681672	True	NA	-7	True	ATTAAA	-42	NA	15681730	15667563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_15668041_15681352
transcript_70702.nnic	chr4	-	717	2	NNC	ENSG00000118564.15	novel	741	5	NA	NA	-3	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15673733	True	NA	-7	True	ATTAAA	-42	NA	15681622	15667563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_15668041_15681382
transcript_70703.known	chr4	-	2951	12	FSM	ENSG00000118564.15	ENST00000511441.5	2951	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	165.955286221299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-15649333	True	NA	0	True	AATAAA	-28	NA	15655341	15605005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15641523_15641628_15644492_15644709_15655203
transcript_70707.known	chr4	-	4014	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_26	48.7381756256183	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-16083700	False	NA	-5	True	AATAAA	-16	NA	16083732	15968229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
transcript_70708.known	chr4	-	4349	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_26	36.4620253132054	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	-16084346	False	NA	-3	True	AATAAA	-18	NA	16084378	15968227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_70712.nic	chr4	-	1092	5	ISM	ENSG00000007062.12	ENST00000505450.5	4349	27	308	56780	-47	-6707	5prime_fragment	FALSE	canonical	3	126	junction_4	40.1396001474853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAATTTCAGAATTGGTG	-16084038	False	NA	NA	False	AATAAA	-36	NA	16084070	16025007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_70715.known	chr4	-	1105	2	FSM	ENSG00000137441.8	ENST00000259989.7	1105	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGACTTTAGTCTTCTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	15963175	15960244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15960612_15962437
transcript_70716.known	chr4	-	248	1	FSM	ENSG00000242358.1	ENST00000487122.1	248	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGAGAATCACGGATGT	-16256544	False	NA	NA	False	NA	NA	NA	16256555	16256307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_16256300_16256600
transcript_70735.known	chr4	-	2476	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	68.4027594472621	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	-16898315	False	NA	-7	True	AATAAA	-18	NA	16898594	16501540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_70736.known	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	69.2510959170632	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	-16893495	True	NA	-12	True	AATAAA	-13	NA	16898634	16501545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_70741.known	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	20.0969870599771	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-17507668	True	NA	-8	True	AATAAA	-17	NA	17512090	17486394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_70747.known	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	204.4524394572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	-17507664	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
transcript_70749.known	chr4	-	1374	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	209.519831996878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGCCTGATTCTGC	-17507647	True	NA	-11	True	AATAAA	-14	NA	17512069	17486397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_70756.known	chr4	+	1876	13	FSM	ENSG00000002549.13	ENST00000606142.5	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	34.2474654374435	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGTCAGAAACAATAAAT	17571282	True	NA	-28	True	NA	NA	NA	17577494	17607934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
transcript_7076.known	chr1	+	3737	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_1	96.8155199229916	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	151187459	True	NA	4	True	TATAAA	-20	NA	151198551	151249504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_70762.known	chr4	+	10858	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	51.0511725842044	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	17603737	True	NA	17	True	AATAAA	-30	NA	17614640	17634105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
transcript_7077.known	chr1	+	3613	14	FSM	ENSG00000143398.20	ENST00000368890.8	3613	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	147.64278015719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187460	True	NA	31	True	AATAAA	-20	NA	151198552	151249531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242437_151242568_151246919_151246966_151247862
transcript_70778.known	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-17802584	True	NA	-5	True	AATAAA	-24	NA	17810757	17800654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17804772_17805106_17805226_17810446
transcript_70779.known	chr4	-	533	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCATGTTTTAACC	-17802538	True	NA	1	True	AATAAA	-22	NA	17810711	17809424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17809693_17810446
transcript_70782.known	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_8	45.1290095171609	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	17803089	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
transcript_70784.nnic	chr4	+	3190	20	NIC	ENSG00000109805.10	novel	4587	21	NA	NA	-51	56	combination_of_known_splicesites	TRUE	canonical	3	37	junction_18	97.3027374470084	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAACAAACCTGATGTCT	17803038	True	NA	6	True	AATAAA	-23	NA	17810927	17843504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17842309_17842380_17843301
transcript_7079.nnic	chr1	+	3481	13	NIC	ENSG00000143398.20	novel	3613	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_11	149.865750108407	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187462	True	NA	31	True	AATAAA	-20	NA	151198554	151249531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151246919_151246966_151247862
transcript_70795.known	chr4	+	1373	9	FSM	ENSG00000163138.19	ENST00000467997.6	1373	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	5.58457697592217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTGATTAACTGA	20699819	True	NA	-1	True	AATAAA	-7	NA	20700476	20752888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
transcript_70797.known	chr4	+	2073	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	5.08298482133063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	20699755	True	NA	10	True	ATTAAA	-22	NA	20700412	20728357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_708.known	chr1	+	795	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1848.56629851353	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	7904180	True	NA	29	True	AATAAA	-19	NA	7961700	7985281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
transcript_70805.known	chr4	+	1720	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.67890834580027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	20699778	True	NA	-26	True	NA	NA	NA	20700435	20728321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
transcript_70807.known	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_7	28.4644027202789	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-22512362	True	NA	-2	True	AATAAA	-21	NA	22516066	22387375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
transcript_70812.known	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_5	118.504437786726	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-24548931	True	NA	-13	True	AATAAA	-16	NA	24584554	24527474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_70819.nic	chr4	-	2192	10	ISM	ENSG00000109606.13	ENST00000336812.5	2998	14	12	12376	-5	-142	5prime_fragment	FALSE	canonical	3	1041	junction_1	133.06138934091	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGTAACTGAATTC	-24548919	True	NA	1	True	AATAAA	-18	NA	24584542	24539850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_70820.known	chr4	-	5503	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.72122865364515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTACGTTATTTTAC	-25160005	True	NA	-7	True	AATAAA	-41	NA	25160449	25120013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_70822.known	chr4	-	2072	5	FSM	ENSG00000109618.13	ENST00000681640.1	2072	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.63145976158349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATTAAATTTTAAAAC	-25160019	True	NA	NA	False	NA	NA	NA	25160463	25153720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_70823.known	chr4	+	383	2	FSM	ENSG00000281501.1	ENST00000510415.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGTCGGAATACTGG	25160186	True	NA	7	True	ATTAAA	-17	NA	25160640	25161687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25160754_25161417
transcript_70824.known	chr4	+	2797	13	FSM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	22.6683516530573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGCTCTCAGTTCTC	25309449	True	NA	11	True	ATTAAA	-16	NA	25312773	25370383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
transcript_70827.nic	chr4	+	2391	12	ISM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	4268	0	0	5prime_fragment	FALSE	canonical	3	99	junction_7	21.4614780786952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTTTCCCATGTGTTT	25309449	True	NA	4	True	NA	NA	NA	25312773	25366115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021
transcript_70828.known	chr4	+	1504	9	FSM	ENSG00000168228.16	ENST00000505451.5	1504	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	49.0661224777341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTACAAACATGTGCCA	25309460	True	NA	NA	False	NA	NA	NA	25312784	25352541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25352073
transcript_70830.nic	chr4	+	989	7	ISM	ENSG00000168228.16	ENST00000505451.5	1504	9	-11	2856	0	-2856	5prime_fragment	FALSE	canonical	3	121	junction_6	17.8364483260791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	25309449	True	NA	6	True	AATAAA	-17	NA	25312773	25349685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491
transcript_70831.known	chr4	+	938	11	NNC	ENSG00000168228.16	novel	2797	13	NA	NA	23	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	74.8668150785113	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	25309493	True	NA	6	True	AATAAA	-17	NA	25312817	25349685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_25312937_25314045_25314165_25315317_25315394_25333178_25333286_25333286_25333296_25333296_25333303_25333303_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_70833.nic	chr4	+	2650	29	NIC	ENSG00000053900.11	novel	2635	29	NA	NA	-58	0	combination_of_known_junctions	TRUE	canonical	3	6	junction_3	65.5599410261094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	NA	False	NA	9	True	AATAAA	-12	NA	25377204	25418489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_25377345_25377417_25377557_25380373_25380446_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_70836.known	chr4	+	2599	29	FSM	ENSG00000053900.11	ENST00000510092.5	2599	29	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	58.9432773858019	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	25372216	True	NA	9	True	AATAAA	-12	NA	25377292	25418489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_7084.known	chr1	+	1319	10	FSM	ENSG00000159352.16	ENST00000368884.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	2307	junction_1	219.335415953188	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGGTTTTGAGTGTG	151238430	True	NA	41	True	AATAAA	-34	NA	151254733	151267479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_70840.nnic	chr4	+	2562	28	NIC	ENSG00000053900.11	novel	2635	29	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_22	66.3198385677643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	25372188	True	NA	9	True	AATAAA	-12	NA	25377264	25418489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_70847.known	chr4	+	773	3	FSM	ENSG00000250317.9	ENST00000515764.2	773	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAAGGTCCGGGTCTCTT	NA	False	NA	NA	False	AATACA	-16	NA	25861829	25929545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25862154_25928312_25928370_25929153
transcript_70848.known	chr4	+	935	3	FSM	ENSG00000250317.9	ENST00000506197.3	919	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	587	junction_2	17.5	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTGGTGTCTTTTT	25910414	True	NA	14	True	ATTAAA	-15	NA	25914203	25929812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25914423_25928312_25928370_25929153
transcript_70858.known	chr4	+	1843	12	FSM	ENSG00000168214.22	ENST00000512671.6	1843	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	488.210529035535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	26319532	True	NA	NA	False	NA	NA	NA	26319661	26431181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26319771_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70859.known	chr4	+	1992	12	FSM	ENSG00000168214.22	ENST00000342295.6	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	490.833260136473	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26319506	True	NA	NA	False	NA	NA	NA	26319635	26431186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26319889_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70862.known	chr4	+	1637	12	FSM	ENSG00000168214.22	ENST00000681025.1	1637	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	547.923201471469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTCATACCAGGTGAT	26313444	True	NA	NA	False	AAAAAG	-38	NA	26321010	26431104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26412929_26412988_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70865.known	chr4	+	1998	12	FSM	ENSG00000168214.22	ENST00000348160.9	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	361.44734307805	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTGTCTCCCTGCAAG	26315289	True	NA	NA	False	NA	NA	NA	26320806	26431136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70868.known	chr4	+	2136	12	FSM	ENSG00000168214.22	ENST00000505958.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	436.389184858146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTTTTTGCTAGGACT	26321354	False	NA	NA	False	NA	NA	NA	26321364	26431009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321872_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70874.known	chr4	+	5395	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	274.839389462282	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	26313447	True	NA	21	True	AATAAA	-29	NA	26321013	26434923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70878.known	chr4	+	1678	11	FSM	ENSG00000168214.22	ENST00000509158.6	1678	11	0	0	0	0	multi-exon	TRUE	canonical	2	34	junction_9	503.649520996496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCCCTGCAAGTGCT	26320373	False	NA	NA	False	NA	NA	NA	26320974	26431140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26430418_26430523_26430691
transcript_70879.known	chr4	+	2169	11	FSM	ENSG00000168214.22	ENST00000681484.1	2169	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	411.415653567046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAATGCAGAAGCC	26321288	False	NA	NA	False	NA	NA	NA	26321298	26431159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321872_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70883.nic	chr4	+	2235	10	NIC	ENSG00000168214.22	novel	5395	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	493	junction_1	289.658845736809	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26320539	False	NA	NA	False	NA	NA	NA	26320801	26431186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430523_26430691
transcript_709.known	chr1	+	1088	7	FSM	ENSG00000116288.13	ENST00000493678.5	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	3700	junction_1	429.298426375976	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	7904171	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_70901.nic	chr4	+	440	4	ISM	ENSG00000168214.22	ENST00000510778.7	1198	12	-214	15171	-5	-51	5prime_fragment	FALSE	canonical	3	493	junction_1	354.42096752622	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATGGAACGCGATGG	26320539	False	NA	NA	False	AAGAAA	-7	NA	26320801	26415532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474
transcript_70902.known	chr4	+	1766	13	FSM	ENSG00000168214.22	ENST00000681679.1	1766	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	541.512824306949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGGTTTCTTGGGA	26313444	True	NA	NA	False	AAAAAG	-29	NA	26321010	26431083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26422131_26422157_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_70903.known	chr4	+	2967	21	FSM	ENSG00000109680.11	ENST00000264866.9	2967	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.50860288781347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTATAATCCTATGCT	26583617	True	NA	NA	False	AATAAA	-27	NA	26584083	26756223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_70906.nic	chr4	+	465	3	ISM	ENSG00000109680.11	ENST00000515568.1	713	9	-251	48536	-53	-6130	5prime_fragment	FALSE	canonical	3	20	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTATTATTATTTAT	26583564	True	NA	NA	False	AATAAA	-20	NA	26584030	26614537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_26584293_26613168_26613242_26614407
transcript_70907.known	chr4	-	346	2	FSM	ENSG00000240005.6	ENST00000667363.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCCAGCATATTTTT	-26860527	True	NA	3	True	AATAAA	-29	NA	26860632	26859805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_26860029_26860509
transcript_70908.known	chr4	-	514	2	FSM	ENSG00000240005.6	ENST00000663047.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCCAGCATATTTTT	-26860526	True	NA	3	True	AATAAA	-29	NA	26860631	26859805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_26860029_26860340
transcript_70910.known	chr4	+	1282	5	FSM	ENSG00000251129.3	ENST00000660373.2	1298	5	0	16	0	-16	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTATTAATATAATTTT	31997208	True	NA	NA	False	AATAAA	-17	NA	31997378	32228527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_31997823_32155313_32155407_32157955_32158082_32225023_32225122_32228006
transcript_70911.known	chr4	+	947	4	FSM	ENSG00000251129.3	ENST00000513211.2	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCGTGCTGTTCTTATTC	31997208	True	NA	NA	False	ATTAAA	-26	NA	31997378	32155833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_31997823_32146052_32146268_32155313_32155407_32155638
transcript_70912.known	chr4	-	982	4	FSM	ENSG00000248215.6	ENST00000515128.2	982	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACGAAGACATTTCTT	-36641808	True	NA	NA	False	AATAAA	-15	NA	36641898	36548779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_36549566_36582656_36582731_36615453_36615527_36641849
transcript_70913.known	chr4	-	3617	7	FSM	ENSG00000181826.10	ENST00000454158.7	3617	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.3166247903554	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTGTCTTGTGGGTGA	-37685584	True	NA	-3	True	AATAAA	-14	NA	37686376	37610633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_37613343_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
transcript_70914.known	chr4	+	3211	14	FSM	ENSG00000169299.14	ENST00000381967.9	3211	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	18.5034780034688	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTGCATTTTTTTT	37823471	True	NA	9	True	AAGAAA	-13	NA	37826685	37862937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
transcript_70923.nic	chr4	+	1135	7	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	8	-14104	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	8.05708797684788	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTGTGCTGAGGTCA	38867039	True	NA	10	True	ATTAAA	-23	NA	38867758	38915179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920
transcript_70925.nnic	chr4	+	1000	6	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	8	-14104	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	15.9674669249697	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTGTGCTGAGGTCA	38867039	True	NA	10	True	ATTAAA	-23	NA	38867758	38915179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38914920
transcript_70927.known	chr4	+	2926	11	FSM	ENSG00000109790.18	ENST00000508137.6	2926	11	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_6	18.5677139142114	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATGTCTAAGATGCT	39043367	False	NA	10	True	GATAAA	-19	NA	39045059	39122208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39045097_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_70928.known	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	11.4029723220649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	39181381	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_70929.known	chr4	+	2513	14	FSM	ENSG00000157796.18	ENST00000506503.1	2513	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	15.7032390281856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAGTATAGTA	39181400	True	NA	NA	False	AATAAA	-19	NA	39182547	39219133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217986
transcript_70930.nnic	chr4	+	1575	13	NIC	ENSG00000157796.18	novel	4395	37	NA	NA	-10	-889	combination_of_known_splicesites	TRUE	canonical	0	0	junction_12	12.7953984784462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCATGTGTCTCTTTG	39181346	True	NA	NA	False	AATACA	-30	NA	39182493	39218244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217982
transcript_70934.known	chr4	+	2676	6	FSM	ENSG00000157796.18	ENST00000512534.5	2676	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	11.5134703716994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGACGTTTTTCTG	NA	False	NA	12	True	AATAAA	-13	NA	39270052	39285809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39270101_39272979_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_70935.known	chr4	-	4870	25	FSM	ENSG00000035928.17	ENST00000349703.7	4870	25	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_12	30.4856238887921	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-39359558	True	NA	-7	True	AATAAA	-19	NA	39366362	39287455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_70937.known	chr4	-	4886	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	45.8720291196668	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-39359571	True	NA	-7	True	AATAAA	-19	NA	39366375	39287455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_70942.nic	chr4	-	1686	13	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-16	21529	-16	-2351	5prime_fragment	FALSE	canonical	3	232	junction_1	15.9450009581547	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGAAAAATTAGTCC	-39359587	True	NA	NA	False	AAGAAA	-40	NA	39366391	39308984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_70944.nic	chr4	-	1168	9	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-16	33004	-16	0	5prime_fragment	FALSE	canonical	3	269	junction_1	9.75961064797157	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATGCCATTAAA	-39359587	True	NA	NA	False	TATAAA	-26	NA	39366391	39320459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_70947.nic	chr4	-	706	5	ISM	ENSG00000035928.17	ENST00000504849.5	873	6	-56	4329	-16	-8	5prime_fragment	FALSE	canonical	3	274	junction_1	10.1242283656583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGGTAAGTGTTCTA	-39359587	True	NA	NA	False	NA	NA	NA	39366391	39327531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_7095.nnic	chr1	+	1194	9	NIC	ENSG00000159352.16	novel	1319	10	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	879.863901052316	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	151238395	True	NA	22	True	AATAAA	-15	NA	151254698	151267460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151254809_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_70950.nic	chr4	-	260	2	ISM	ENSG00000035928.17	ENST00000503784.1	504	5	-42	23762	-16	-23762	5prime_fragment	FALSE	canonical	3	285	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAATAAAGGAAATCA	-39359587	True	NA	44	True	AAGAAA	-14	NA	39366391	39351369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39351477_39366238
transcript_70951.known	chr4	+	6002	5	FSM	ENSG00000134962.7	ENST00000257408.5	6002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTGGTCAATTTTAAGA	NA	False	NA	NA	False	AATAAA	-33	NA	39406929	39451533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39407775_39434209_39434721_39437726_39437996_39446331_39447476_39448300
transcript_70958.known	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_7	1393.20836597417	18792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	-39310806	True	NA	-17	True	AATAAA	-31	NA	39458922	39454123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_70960.known	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_7	2869.57691541269	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	-39310807	True	NA	-71	True	NA	NA	NA	39458923	39452586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
transcript_70967.known	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	6213	junction_3	1013.72263629325	2235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39310772	True	NA	-30	True	AATAAA	-18	NA	39458888	39454136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
transcript_70968.known	chr4	-	662	7	FSM	ENSG00000163682.17	ENST00000508595.6	662	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	3069.86359179398	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39310804	True	NA	-30	True	AATAAA	-18	NA	39458920	39454136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458890
transcript_70969.known	chr4	-	772	7	FSM	ENSG00000163682.17	ENST00000503277.6	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_6	1464.08078860272	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAACCGGTTATCCTT	-39310778	True	NA	-25	True	AATAAA	-23	NA	39458894	39454131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458441_39458890
transcript_70979.known	chr4	+	3572	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_7	16.6279884532074	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	39457731	True	NA	NA	False	NA	NA	NA	39459055	39479506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_70981.known	chr4	+	2259	11	FSM	ENSG00000121897.15	ENST00000640381.1	2259	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	32.2428286600292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCGGGAGGCTAAGGC	39457733	True	NA	NA	False	AAAACA	-42	NA	39459057	39477414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39468428_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_70983.known	chr4	+	1485	10	FSM	ENSG00000121897.15	ENST00000340169.7	1485	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	36.4796577848363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	39457784	True	NA	13	True	AATAAA	-45	NA	39459108	39477584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39477062
transcript_70984.known	chr4	+	1578	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	35.1297418924776	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	39457738	True	NA	10	True	ATTAAA	-25	NA	39459062	39477648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_7099.known	chr1	+	1232	9	FSM	ENSG00000159352.16	ENST00000476855.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	3	2307	junction_1	208.98560805711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGGTGTGGATCCCAA	151238465	True	NA	NA	False	NA	NA	NA	151254768	151267232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266440_151266519_151266588_151267172
transcript_70994.known	chr4	+	1258	8	FSM	ENSG00000121897.15	ENST00000261434.8	1258	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	44.592485868343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAAAAGGAAAAAAAA	39457762	True	NA	-39	True	NA	NA	NA	39459086	39477532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_70995.known	chr4	+	1159	7	FSM	ENSG00000121897.15	ENST00000638451.1	1159	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.6438302585459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	39457784	True	NA	13	True	AATAAA	-45	NA	39459108	39477584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_70997.known	chr4	+	1011	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	2.35702260395516	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	39457733	True	NA	NA	False	NA	NA	NA	39459057	39464163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
transcript_70999.known	chr4	+	1005	3	FSM	ENSG00000121897.15	ENST00000509519.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	52.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGGATCACTTGAGC	39457720	True	NA	NA	False	NA	NA	NA	39459044	39464238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39463524
transcript_710.nic	chr1	+	650	3	ISM	ENSG00000162426.16	ENST00000471889.7	2496	9	-18	18730	-18	-10674	5prime_fragment	TRUE	canonical	3	15	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCAACTGCTTCCTTTT	8317693	True	NA	NA	False	AATAAA	-20	NA	8318095	8325435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_8318187_8324305_8324727_8325297
transcript_71004.known	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_9	82.238315254313	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-39511205	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
transcript_71012.known	chr4	-	1712	11	FSM	ENSG00000109814.12	ENST00000507089.5	1712	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	254.578082324461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGGCACCCGCCACAGT	-39511205	True	NA	NA	False	NA	NA	NA	39527439	39499910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39527282
transcript_71016.known	chr4	-	2826	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	259.795708201656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTATATGGGTGTAAT	-39511203	True	NA	-8	True	AATAAA	-13	NA	39527437	39498762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
transcript_71022.known	chr4	-	6252	5	FSM	ENSG00000163683.12	ENST00000295958.10	6252	5	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	44.7290453732248	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGTTTCTTAA	-39635789	True	NA	NA	False	AATAAA	-13	NA	39638865	39546335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
transcript_71027.known	chr4	-	680	4	FSM	ENSG00000163683.12	ENST00000507613.5	680	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	250.760177593386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTGTGATTATAATTT	-39638774	False	NA	NA	False	GGGGCT	-44	NA	39638845	39551838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39552159_39556427_39556571_39605070_39605181_39638738
transcript_71028.known	chr4	-	830	4	FSM	ENSG00000163683.12	ENST00000511809.5	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	264.940664216642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTATTTGTGGATGG	-39635817	True	NA	NA	False	AAGAAA	-32	NA	39638893	39551642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39552159_39572414_39572464_39605070_39605181_39638738
transcript_71032.known	chr4	+	2615	4	FSM	ENSG00000255458.8	ENST00000667934.1	2615	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGATCTTTGCATTTG	39639054	False	NA	-11	True	AATAAA	-4	NA	39639106	39653515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39639295_39641693_39641793_39650376_39650455_39651265
transcript_71033.nic	chr4	+	402	3	FSM	ENSG00000255458.8	ENST00000693190.1	393	3	-9	0	6	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTATTTTTTGCCTGG	39639000	True	NA	NA	False	AATAAA	-24	NA	39639130	39650515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39639295_39641693_39641793_39650376
transcript_71034.known	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	326.865245764809	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	39664870	True	NA	29	True	AATAAA	-25	NA	39698135	39782792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71035.known	chr4	+	2262	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	410.814502611039	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	39664873	True	NA	6	True	AATAAA	-14	NA	39698138	39779992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71038.known	chr4	+	2175	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.519769223246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	39664910	True	NA	-3	True	AATAAA	-5	NA	39698175	39779983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
transcript_71041.known	chr4	+	871	6	FSM	ENSG00000078140.14	ENST00000513231.5	871	6	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_1	280.993665409027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTCTGTGTAAATT	39664873	True	NA	-5	True	AATAAA	-5	NA	39698138	39778607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71043.known	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	378.234963349503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	39664897	True	NA	98	True	AAGAAA	-7	NA	39698162	39778710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71045.known	chr4	+	566	4	FSM	ENSG00000078140.14	ENST00000510719.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	425.697858423867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTAATTTTT	39697888	False	NA	21	True	AATAAA	-31	NA	39698327	39778633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39774833_39774934_39777681_39777811_39778359
transcript_71047.known	chr4	-	2685	16	FSM	ENSG00000121892.15	ENST00000503396.5	2685	16	0	0	0	0	multi-exon	TRUE	canonical	3	333	junction_12	40.0303218406581	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGGTTTCATTTACA	-39977196	True	NA	-1	True	AATAAA	-22	NA	39977956	39898013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_71049.known	chr4	+	4181	3	FSM	ENSG00000168421.13	ENST00000381799.10	4181	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGGTAGTTCATTCTT	40196766	True	NA	NA	False	ATTAAA	-35	NA	40197030	40246967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40197301_40242713_40242835_40243177
transcript_71055.known	chr4	-	1681	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_6	46.4351399504968	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCATTTTGGGTGGGA	-40854841	True	NA	-28	True	AATAAA	-4	NA	40857155	40815332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
transcript_71056.nic	chr4	-	1697	7	NIC	ENSG00000163697.17	novel	2964	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	65.7184651880023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTCAAACTTCTGCCT	-40854878	True	NA	-8	True	AATAAA	-24	NA	40857192	40815312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_71058.nic	chr4	-	1620	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	0	-57	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	65.7184651880023	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTTTTCCGATGGTT	-40854878	True	NA	-13	True	ATTAAA	-16	NA	40857192	40815389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_71063.known	chr4	+	4839	12	FSM	ENSG00000179299.17	ENST00000381782.7	4839	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	55.8798888999529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTTTCTTCTTTGAG	40746765	True	NA	NA	False	ATTAAA	-17	NA	40749954	40811184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40807060_40807185_40808306
transcript_71066.nic	chr4	+	1637	7	ISM	ENSG00000179299.17	ENST00000316607.5	3546	11	0	33592	0	-83	5prime_fragment	FALSE	canonical	3	91	junction_6	33.543090031911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTTATCAGGCTGT	40746735	True	NA	NA	False	NA	NA	NA	40749924	40776393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048
transcript_71068.known	chr4	+	1759	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	19.8131269616888	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	40746774	True	NA	NA	False	AATAAA	-7	NA	40749963	40775456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
transcript_71071.nic	chr4	+	1360	4	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-39	13750	0	-13750	5prime_fragment	FALSE	canonical	3	168	junction_3	8.60232526704263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAGAAAAAAAAATTCTA	40746735	True	NA	NA	False	NA	NA	NA	40749924	40761706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170
transcript_71073.known	chr4	+	748	9	FSM	ENSG00000154277.13	ENST00000505232.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	840.675165789379	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTCAACATGAAAATAT	41211747	True	NA	NA	False	NA	NA	NA	41256931	41268108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263228_41263292_41264102_41264162_41267986
transcript_71078.known	chr4	+	827	8	FSM	ENSG00000154277.13	ENST00000508768.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	882.142267206281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACAGCTGTCCACTGG	41256847	True	NA	NA	False	NA	NA	NA	41256939	41268239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41263224_41263292_41264102_41264162_41267986
transcript_71082.nnic	chr4	+	936	7	NIC	ENSG00000154277.13	novel	1103	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_1	932.054972746899	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCTGATTCTCATTT	41211743	True	NA	29	True	AATAAA	-21	NA	41256927	41268429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_41257010_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_71087.known	chr4	-	451	2	FSM	ENSG00000251173.1	ENST00000510073.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTAGGTGACGATTAC	-41256678	True	NA	NA	False	AATAAA	-17	NA	41256721	41253882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_41254171_41256558
transcript_7109.nnic	chr1	+	1050	8	NIC	ENSG00000159352.16	novel	1319	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	917.134267872552	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	151238424	True	NA	22	True	AATAAA	-15	NA	151254727	151267460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151254809_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_71090.known	chr4	+	1092	8	FSM	ENSG00000109133.13	ENST00000513702.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	88.3862118714203	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTGCTAATGGTTA	NA	False	NA	57	True	AAAAAG	-20	NA	41935128	41954395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935263_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_71094.known	chr4	+	867	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.201895287568	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	NA	False	NA	NA	False	AATGAA	-38	NA	41935128	41954122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_711.known	chr1	+	2496	9	FSM	ENSG00000162426.16	ENST00000471889.7	2496	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	4.51213641194501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	8317711	True	NA	9	True	AATAAA	-17	NA	8318113	8344165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_8318187_8324305_8324727_8325297_8325391_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_71100.known	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	25.1440295541948	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	41935393	False	NA	19	True	AAAAAG	-29	NA	41935428	41960803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_71103.known	chr4	+	2217	19	FSM	ENSG00000014824.14	ENST00000513699.5	2217	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.942571143777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACATTTTGGTTATTTA	41975759	True	NA	NA	False	NA	NA	NA	41990501	42086369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42018388_42018506_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_71104.known	chr4	+	6164	18	FSM	ENSG00000014824.14	ENST00000264451.12	6164	18	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_17	58.8896686999067	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTTTGGGATTTTT	41975787	True	NA	NA	False	AATAAA	-27	NA	41990529	42090461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_71108.nic	chr4	+	2338	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-28	11610	0	0	5prime_fragment	FALSE	canonical	3	556	junction_9	49.0735656311012	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACATTTGAATTCTGT	41975759	True	NA	-35	True	TTTAAA	-28	NA	41990501	42078851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_71109.nic	chr4	+	2396	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-28	11552	0	58	5prime_fragment	FALSE	canonical	3	556	junction_9	49.0735656311012	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTTGAAGGCAGT	41975759	True	NA	23	True	AATAAA	-25	NA	41990501	42078909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_71111.nnic	chr4	+	2266	16	NIC	ENSG00000014824.14	novel	2217	19	NA	NA	0	58	combination_of_known_splicesites	FALSE	canonical	1	5	junction_15	157.244127252993	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTTGAAGGCAGT	41975759	True	NA	23	True	AATAAA	-25	NA	41990501	42078909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42078211
transcript_71113.nnic	chr4	+	1399	11	NNC	ENSG00000014824.14	novel	2217	19	NA	NA	0	-18325	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_10	243.048246239301	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGTTTTATTTGGTC	41975759	True	NA	7	True	AATAAA	-19	NA	41990501	42060526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42059963_42060037_42060190
transcript_71116.nic	chr4	+	1019	5	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-28	67189	0	2497	5prime_fragment	FALSE	canonical	3	605	junction_4	47.6995807109455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTGACCATGTGTG	41975759	True	NA	NA	False	AATAAA	-16	NA	41990501	42023272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837
transcript_71119.nnic	chr4	-	1117	2	FSM	ENSG00000289643.1	ENST00000685812.1	1117	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTTCTGGTCTATGTTT	-42291912	True	NA	-5	True	ATTAAA	-14	NA	42292644	42285822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_42286402_42292106
transcript_71121.known	chr4	+	4460	17	FSM	ENSG00000151806.14	ENST00000281543.6	4460	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	36.3201368905735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTATCACTGCCAA	44671394	True	NA	NA	False	ATTAAA	-15	NA	44678419	44700928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_71124.known	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_5	8.02080627701064	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	-44725566	True	NA	NA	False	NA	NA	NA	44726556	44701794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_71129.known	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.28009661779378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	-44725555	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_71133.known	chr4	+	1939	9	FSM	ENSG00000163288.14	ENST00000295454.8	1939	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.330718913883074	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAAAAAAAACACACAAT	47031549	True	NA	NA	False	NA	NA	NA	47031566	47426447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_47031732_47031913_47032006_47032416_47032485_47161248_47161470_47320126_47320210_47403317_47403456_47403558_47403712_47406681_47406927_47425673
transcript_71134.known	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	8.16624148553054	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-47462599	True	NA	72	True	AATGAA	-3	NA	47463702	47450786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
transcript_71141.nic	chr4	+	309	2	ISM	ENSG00000163293.12	ENST00000511852.5	884	5	-60	10644	-22	46	5prime_fragment	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCAGTAAGCTCAAGTAT	48016227	True	NA	NA	False	AATACA	-21	NA	48016749	48025240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_48016886_48025067
transcript_71143.known	chr4	-	2664	23	FSM	ENSG00000170448.12	ENST00000507131.5	2664	23	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_22	16.6921568161084	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGTCGGAAGAAGAACAG	-47911117	True	NA	NA	False	AAAACA	-9	NA	47914616	47848303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_71144.known	chr4	-	3723	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	27.0246291096177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	-47914657	False	NA	7	True	ATTAAA	-23	NA	47914667	47847232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
transcript_71148.nnic	chr4	-	1076	4	NNC	ENSG00000198515.16	novel	2867	10	NA	NA	-28	-30442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.85861230093008	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTACATTTTGACTTTT	-48016462	True	NA	NA	False	AATAAA	-19	NA	48016709	47980276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_47980918_47981392_47981501_48010793_48010894_48016482
transcript_71152.known	chr4	-	3661	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_2	12.9090510346778	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATCTGCCACATTCCT	-48268889	True	NA	-4	True	AGTAAA	-20	NA	48269838	48135782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
transcript_71167.nic	chr4	+	1373	9	NIC	ENSG00000109180.15	novel	1204	8	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	305.382444649328	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCATCTTCCTTGATT	NA	False	NA	16	True	AATAAA	-20	NA	48830909	48861249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_48831053_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71174.known	chr4	+	1958	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	96.623544620346	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	48816422	True	NA	NA	False	AATAAA	-17	NA	48831087	48861815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_7118.known	chr1	+	801	2	FSM	ENSG00000159352.16	ENST00000461434.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	2307	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTAGGAACTGATAAT	151238454	True	NA	NA	False	NA	NA	NA	151254757	151262910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151254809_151262160
transcript_71182.known	chr4	+	1423	9	FSM	ENSG00000109180.15	ENST00000508293.5	1423	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308.58750784826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGGCAAATAAAATGTAA	48831011	False	NA	-17	True	ATTAAA	-41	NA	48831305	48861216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831532_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71185.known	chr4	+	1756	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	313.031588677891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	48816442	True	NA	NA	False	AGTAAA	-44	NA	48831107	48861786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
transcript_7119.known	chr1	-	637	2	FSM	ENSG00000232671.7	ENST00000660511.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAACACGCTTTGTAAAG	-151281827	True	NA	-3	True	ATTAAA	-12	NA	151281950	151280029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151280259_151281542
transcript_71195.known	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	307.305222864825	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	48830790	True	NA	17	True	AATAAA	-21	NA	48831341	48861250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71196.known	chr4	+	1594	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	267.11596264544	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	48816418	True	NA	28	True	ATTAAA	-25	NA	48831083	48861200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71200.known	chr4	-	1109	7	FSM	ENSG00000145247.12	ENST00000508632.6	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_5	150.218729413701	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGACTCCATCACACACA	-48881314	True	NA	NA	False	NA	NA	NA	48906774	48885018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_71207.known	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	1036.43261237767	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-48906921	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
transcript_71209.known	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	1093.20563481899	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	-48881328	True	NA	NA	False	AATAAA	-16	NA	48906788	48885387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_7121.known	chr1	-	307	2	FSM	ENSG00000232671.7	ENST00000494138.5	397	2	90	0	49	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTTTGTAAAGTAATTG	-151281870	False	NA	3	True	ATTAAA	-18	NA	151281880	151280023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151280259_151281808
transcript_71221.known	chr4	-	459	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	1387.74789577294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCTAATGGAACAAAAACA	-48881314	True	NA	NA	False	AATAAA	-4	NA	48906774	48885399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
transcript_71225.known	chr4	+	1584	12	FSM	ENSG00000109184.15	ENST00000507741.5	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	107.334496853882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTAACCTTACTGTTTA	51840174	True	NA	NA	False	AAAACA	-33	NA	51843152	51914036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_51843268_51848204_51848368_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_71227.known	chr4	+	4222	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	47.7246267664819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51840174	True	NA	11	True	AATAAA	-25	NA	51843152	51916837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_7123.known	chr1	-	3570	11	FSM	ENSG00000143390.18	ENST00000452671.7	3570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	89.508044331222	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	-151344051	True	NA	0	True	ATTAAA	-16	NA	151347252	151340639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151347210
transcript_71234.known	chr4	+	4207	10	FSM	ENSG00000109184.15	ENST00000381441.7	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	65.0585681055971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51843036	False	NA	11	True	AATAAA	-25	NA	51843062	51916837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51913289_51913393_51913528
transcript_7124.known	chr1	-	2056	11	FSM	ENSG00000143390.18	ENST00000392746.7	2056	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	98.0898057904082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTTCAAAGTTCCT	-151346783	False	NA	NA	False	AATAAA	-12	NA	151346822	151342246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346421_151346607_151346754
transcript_71244.nic	chr4	-	1372	7	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	-4	-2990	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	273.874058647401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-52032504	True	NA	-1	True	AATAAA	-20	NA	52038303	52023695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031851_52031962_52033430_52033641_52038226
transcript_71246.nnic	chr4	-	1349	7	NNC	ENSG00000163069.13	novel	4248	6	NA	NA	-4	-2990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.862157242711	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-52032504	True	NA	-1	True	AATAAA	-20	NA	52038303	52023695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031874_52031962_52033430_52033641_52038226
transcript_71247.nic	chr4	-	1132	7	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	-4	-3230	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	273.874058647401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTATATCTTGACTTG	-52032504	True	NA	-9	True	ATTAAA	-21	NA	52038303	52023935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031851_52031962_52033430_52033641_52038226
transcript_71249.nnic	chr4	-	1109	7	NNC	ENSG00000163069.13	novel	4248	6	NA	NA	-4	-3230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.862157242711	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTATATCTTGACTTG	-52032504	True	NA	-9	True	ATTAAA	-21	NA	52038303	52023935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031874_52031962_52033430_52033641_52038226
transcript_71251.known	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_4	65.6493716649291	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-52032500	True	NA	-16	True	AATAAA	-15	NA	52038299	52020705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
transcript_71254.nnic	chr4	-	1048	5	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	0	-2990	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	273.796457245159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-52032500	True	NA	-1	True	AATAAA	-20	NA	52038299	52023695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52038226
transcript_71255.nnic	chr4	-	808	5	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	0	-3230	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	273.796457245159	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTATATCTTGACTTG	-52032500	True	NA	-9	True	ATTAAA	-21	NA	52038299	52023935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52038226
transcript_71257.known	chr4	+	4430	13	FSM	ENSG00000163071.11	ENST00000295213.9	4430	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.93006648591635	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAATGATGTCCTTTACC	52051042	True	NA	12	True	AATAAA	-24	NA	52051303	52097299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52051792_52060418_52060525_52060781_52060898_52062219_52062333_52069820_52069917_52071916_52072157_52076778_52077041_52078734_52078894_52079743_52079920_52082386_52082511_52084915_52085000_52094526_52094573_52094879
transcript_71259.known	chr4	-	7932	9	FSM	ENSG00000109189.13	ENST00000441222.8	7932	9	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_1	18.5434456075455	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCAGTATATTGTTCT	-52655577	True	NA	3	True	AATAAA	-27	NA	52659301	52590959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_71264.nnic	chr4	-	691	2	Antisense	novelGene_ENSG00000250302.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCAGTCATCTAATTTG	-52861905	True	NA	-1	True	AATAAA	-19	NA	52862185	52861142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_52861732_52862083
transcript_71267.known	chr4	-	2744	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	34.0293990543471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	-52750000	False	NA	-13	True	AATAAA	-24	NA	52751399	52743516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
transcript_71269.known	chr4	+	987	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	713.5	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	31	True	AATAAA	-19	NA	52712324	52714141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52712823_52712960_52713493
transcript_71272.known	chr4	-	3614	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAAAGTGATTCACAT	-52750026	False	1399	-22	True	AATAAA	-18	NA	52751425	52742552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52745944_52750929_52751070_52751342
transcript_71277.known	chr4	+	6065	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGACTGGACCATGAT	52692817	True	NA	NA	False	ATTAAA	-18	NA	52712404	52718765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52712823
transcript_71280.known	chr4	-	511	3	FSM	ENSG00000226887.8	ENST00000454756.6	511	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAACCAAAACTAACCCA	-52750187	False	NA	NA	False	NA	NA	NA	52751586	52722617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52722745_52750929_52751070_52751342
transcript_71281.known	chr4	+	667	2	FSM	ENSG00000226950.8	ENST00000676262.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTTGGGTCTCTTGTC	52692913	True	NA	23	True	AATAAA	-11	NA	52712500	52714133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52713493
transcript_71282.known	chr4	+	1968	4	FSM	ENSG00000128045.7	ENST00000248706.5	1968	4	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	2.86744175568088	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	52860424	True	NA	29	True	AATAAA	-17	NA	52862316	52866835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334
transcript_71283.known	chr4	-	3162	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	7.88095013307406	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATTGTGGATTACA	-53364786	True	NA	NA	False	AATAAA	-17	NA	53366061	52872981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_71286.known	chr4	-	3978	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	6.38435587980495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	-53591216	True	NA	NA	False	NA	NA	NA	53591486	53459300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
transcript_71290.nic	chr4	-	1066	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81145	1155	31311	-1155	3prime_fragment	FALSE	canonical	3	25	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	-53476988	True	NA	0	True	AATAAA	-17	NA	53477072	53460455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_71294.nic	chr4	+	2200	19	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	122.028748383726	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370008	True	NA	29	True	AATAAA	-30	NA	53377622	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71296.known	chr4	+	2180	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_13	115.019751575958	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	53370030	True	NA	76	True	AATAAA	-19	NA	53377644	53459668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71297.known	chr4	+	3396	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	113.958469943977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	53370026	True	NA	26	True	TATAAA	-36	NA	53377640	53460862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71300.nic	chr4	+	2131	18	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	116.770499189516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370008	True	NA	29	True	AATAAA	-30	NA	53377622	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71302.nic	chr4	+	2089	17	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_12	106.904089608396	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370005	True	NA	29	True	AATAAA	-30	NA	53377619	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71306.nic	chr4	+	2104	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	105.596445844545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370008	True	NA	29	True	AATAAA	-30	NA	53377622	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71310.nic	chr4	+	2023	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	3	152	junction_8	108.537346363155	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370005	True	NA	29	True	AATAAA	-30	NA	53377619	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71313.nic	chr4	+	2062	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_7	89.9054812319892	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370005	True	NA	29	True	AATAAA	-30	NA	53377619	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71315.nic	chr4	+	1981	16	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_11	112.220299213447	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370005	True	NA	29	True	AATAAA	-30	NA	53377619	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71318.nic	chr4	+	1996	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	110.890857252626	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370008	True	NA	29	True	AATAAA	-30	NA	53377622	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_7132.known	chr1	+	618	2	FSM	ENSG00000237976.2	ENST00000455503.2	647	2	29	0	29	0	multi-exon	FALSE	canonical	3	78	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGAACATTGTACTGA	151346112	True	NA	NA	False	NA	NA	NA	151346966	151348027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151347189_151347631
transcript_71321.known	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_8	95.2078285239449	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370081	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71326.known	chr4	-	1109	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	19.8736005796635	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCAGCCTTTTTTATTT	-54062358	True	NA	NA	False	CATAAA	-3	NA	54064605	54009788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
transcript_71328.known	chr4	+	1146	5	FSM	ENSG00000134853.12	ENST00000507536.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	6.557438524302	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGTAGCTTGTA	54277109	False	NA	8	True	AATAAA	-17	NA	54277175	54281977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54281580
transcript_7133.known	chr1	-	1722	12	FSM	ENSG00000143416.21	ENST00000368868.10	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.1189889501172	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-151371825	True	NA	-4	True	AATAAA	-20	NA	151372705	151364303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369190_151369441_151369555_151369712_151369770_151372637
transcript_71332.known	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	28.2935946814822	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	54654059	True	NA	19	True	AATAAA	-20	NA	54657956	54740715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_71333.known	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_24	37.7641784604394	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-55120890	True	NA	-15	True	ATTAAA	-20	NA	55125595	55078480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_71337.known	chr4	+	4061	5	FSM	ENSG00000128039.13	ENST00000264228.9	4061	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	27.0970478096785	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGTCGAATTTCTTT	55343079	True	NA	NA	False	ATTAAA	-21	NA	55346241	55373100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_71338.known	chr4	+	2766	4	FSM	ENSG00000128039.13	ENST00000679836.1	2766	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	154.724127257372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGCTGGGATTACA	55343050	True	NA	NA	False	NA	NA	NA	55346212	55371911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55369831
transcript_71339.known	chr4	+	768	3	FSM	ENSG00000128039.13	ENST00000505210.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTCCACTTTCTGA	55346400	False	NA	24	True	AATAAA	-21	NA	55346411	55370310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55346558_55359345_55359489_55369831
transcript_7134.known	chr1	-	1922	11	FSM	ENSG00000143416.21	ENST00000463664.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	68.5991253588557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGGCACCAAGAAATA	-151371814	True	NA	-45	True	NA	NA	NA	151372694	151364344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
transcript_71342.known	chr4	-	900	6	FSM	ENSG00000163440.12	ENST00000295645.9	900	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.93907194296653	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTTTACTTATGAC	NA	False	NA	NA	False	AATAAA	-21	NA	55592245	55556518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55556712_55562403_55562613_55569717_55569862_55580820_55580912_55582116_55582238_55592103
transcript_71349.known	chr4	-	816	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_9	40.7624857793729	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55630474	True	NA	-2	True	ATTAAA	-14	NA	55636298	55595230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_7135.known	chr1	-	2128	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	71.9878247593317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGATGGCCTTGTCTTT	-151371826	True	NA	-9	True	AATAAA	-15	NA	151372706	151364308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_71350.nic	chr4	-	942	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_9	91.9344909013149	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55636877	True	NA	-2	True	ATTAAA	-14	NA	55636887	55595230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_71351.nnic	chr4	-	719	10	NNC	ENSG00000109255.11	novel	816	10	NA	NA	-124	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	120.677715884546	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55636812	False	NA	-2	True	ATTAAA	-14	NA	55636822	55595230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636701
transcript_71353.known	chr4	-	756	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_7	118.630729577121	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	-55636274	False	NA	0	True	ATTAAA	-16	NA	55636284	55595228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
transcript_71354.nic	chr4	-	812	9	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	140.662495001333	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55636795	False	NA	-2	True	ATTAAA	-14	NA	55636805	55595230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636543
transcript_71356.known	chr4	-	658	9	FSM	ENSG00000109255.11	ENST00000507338.1	658	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	121.846983959391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-55636258	False	NA	-55	True	NA	NA	NA	55636268	55595283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_71367.known	chr4	+	894	3	FSM	ENSG00000250821.3	ENST00000636125.2	894	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGCATTTTAATGTA	NA	False	NA	NA	False	AATAAA	-27	NA	55819789	55837489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55820148_55831333_55831465_55837084
transcript_71368.known	chr4	+	3357	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.9359673791855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	55851355	True	NA	27	True	AATAAA	-44	NA	55853674	55905034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_71369.known	chr4	+	3592	19	FSM	ENSG00000090989.18	ENST00000381295.7	3592	19	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	20.4996988836663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAAAAATTAATTGCAA	55851328	True	NA	79	True	ATTAAA	-21	NA	55853647	55905086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_71370.known	chr4	+	3248	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	34.1781410951462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	55851419	True	NA	27	True	AATAAA	-44	NA	55853738	55905034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_71379.known	chr4	+	2092	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	55947248	True	NA	NA	False	NA	NA	NA	55948870	55960925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
transcript_71382.known	chr4	+	5596	26	FSM	ENSG00000174799.11	ENST00000257287.5	5596	26	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_21	5.69013180866665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTCTTTCTTACA	55947322	True	NA	7	True	AATAAA	-13	NA	55948944	56033361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681_55959767_55964273_55964403_55965643_55965860_55969062_55969129_55971269_55971409_55974745_55974970_55980142_55980296_55981226_55981380_55985280_55985359_55991933_55992086_55999301_55999418_55999490_55999646_56008326_56008383_56009734_56009904_56011411_56011523_56011799_56011986_56017647_56017858_56019352_56019556_56020675_56020781_56024500_56024615_56031359
transcript_71384.known	chr4	-	3581	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	11.8226693349718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-56386213	True	NA	NA	False	ATTAAA	-25	NA	56387491	56338289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_71393.nic	chr4	-	677	4	ISM	ENSG00000157426.14	ENST00000502617.1	3004	11	3	29389	3	3442	5prime_fragment	FALSE	canonical	3	68	junction_2	6.64997911442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCATAAGTTCTGAG	-56386219	True	NA	NA	False	AAAAAG	-7	NA	56387497	56378316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_56378465_56382476_56382598_56384069_56384342_56387361
transcript_71394.known	chr4	-	1222	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTTGCCCATTTTC	-56386194	True	NA	NA	False	TATAAA	-16	NA	56387472	56381758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56382598_56384069_56384342_56387361
transcript_71395.known	chr4	-	3004	11	FSM	ENSG00000157426.14	ENST00000502617.1	3004	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	7.46726188103779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTCATAGTTTCT	-56386222	True	NA	NA	False	NA	NA	NA	56387500	56348927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_71396.nic	chr4	-	4036	11	NIC	ENSG00000128059.8	novel	3682	11	NA	NA	-437	0	combination_of_known_junctions	TRUE	canonical	3	91	junction_9	167.499731343068	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56435901	False	NA	-11	True	GATAAA	-24	NA	56436052	56393361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406619_56407649_56407717_56435349
transcript_71397.known	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_6	32.9915140604368	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56424687	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_71403.nic	chr4	-	2357	8	ISM	ENSG00000128059.8	ENST00000264220.6	3682	11	-437	6654	-437	1374	5prime_fragment	FALSE	canonical	3	563	junction_3	32.8155015633944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGGAATATTTGCTTG	-56435901	False	NA	NA	False	AATAAA	-22	NA	56436052	56400015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_71405.nic	chr4	-	1213	5	ISM	ENSG00000128059.8	ENST00000264220.6	3682	11	-437	9701	-437	0	5prime_fragment	FALSE	canonical	3	639	junction_2	14.0356688476182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTGATATAAATGACA	-56435901	False	NA	NA	False	NA	NA	NA	56436052	56403062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_71406.nic	chr4	-	661	2	ISM	ENSG00000128059.8	ENST00000510643.5	808	6	-109	4261	-2	-4250	5prime_fragment	FALSE	canonical	3	649	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAGAAATGGGA	-56424689	True	NA	NA	False	NA	NA	NA	56435617	56407323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_56407717_56435349
transcript_7141.known	chr1	+	918	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_6	70.1205311509325	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	151391287	True	NA	14	True	AATAAA	-14	NA	151399572	151401937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
transcript_71414.known	chr4	+	3339	10	FSM	ENSG00000128050.9	ENST00000264221.6	3339	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	996.460736808029	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTCTCTGAAGTCAC	56434089	True	NA	36	True	ATTAAA	-25	NA	56435748	56461368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56435929_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_71416.known	chr4	+	1514	10	FSM	ENSG00000128050.9	ENST00000505164.5	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	997.063329959846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGCTGACAAGAAAAT	56434092	True	NA	-95	True	NA	NA	NA	56435751	56459499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56435976_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_71425.known	chr4	+	6371	9	FSM	ENSG00000128050.9	ENST00000512576.3	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	2815	junction_3	300.624662161972	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTTTGTTGTCAG	56376163	True	NA	4	True	AATAAA	-14	NA	56436259	56464578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_71427.known	chr4	+	3855	19	FSM	ENSG00000174780.17	ENST00000642900.1	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_7	58.8146544684819	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTTTTGGGTGTTG	56460260	True	NA	16	True	AATAAA	-23	NA	56467616	56503681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_71436.nic	chr4	+	1722	17	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-27	8289	-27	0	5prime_fragment	FALSE	canonical	3	452	junction_7	58.0974060845233	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTAAGGCATTAAAAAAGT	56460233	True	NA	57	True	AAAAAG	-18	NA	56467589	56495392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356
transcript_71438.nic	chr4	+	1686	16	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-27	12113	-27	-115	5prime_fragment	FALSE	canonical	3	452	junction_7	59.9742166823933	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATTTTTCATTGTAAC	56460233	True	NA	10	True	NA	NA	NA	56467589	56491568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430
transcript_71443.nic	chr4	+	894	9	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-27	20520	-27	5989	5prime_fragment	FALSE	canonical	3	452	junction_7	76.7918249229695	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGTGAAATTAACCA	56460233	True	NA	NA	False	GATAAA	-38	NA	56467589	56483161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138
transcript_71445.known	chr4	+	745	5	FSM	ENSG00000174780.17	ENST00000504757.2	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	68.3168171096985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCTCCAAGTTCCTGT	56460261	True	NA	NA	False	ATTAAA	-22	NA	56467617	56474508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279
transcript_71446.nnic	chr4	+	921	3	NIC	ENSG00000196503.5	novel	1447	4	NA	NA	-120	-465	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCAGTGCATGGGATG	56505526	True	NA	6	True	AATAAA	-18	NA	56505670	56523983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_56506142_56511184_56511348_56523696
transcript_71447.known	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.48074069840786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821559	True	NA	-1	True	AATAAA	-17	NA	56821701	56809860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
transcript_71448.known	chr4	-	659	4	FSM	ENSG00000128040.12	ENST00000504762.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.94422221866655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATTCAGTTCCTACT	-56821552	True	NA	-12	True	AATAAA	-6	NA	56821694	56809871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821502
transcript_71449.known	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821600	True	NA	-1	True	AATAAA	-17	NA	56821742	56809860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
transcript_71456.known	chr4	+	4108	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	106.35101127869	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56977386	True	NA	16	True	AATAAA	-16	NA	56977741	57031158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_71457.known	chr4	+	551	2	FSM	ENSG00000047315.17	ENST00000497845.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAACTGCAGACATA	56974214	True	NA	NA	False	NA	NA	NA	56978903	56986803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56979005_56986353
transcript_71462.known	chr4	+	870	1	FSM	ENSG00000243199.1	ENST00000466377.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	NA	False	NA	NA	False	NA	NA	NA	65573458	65574328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_65573500_65574300
transcript_71463.known	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	14.5496171092126	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-67542850	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_71468.known	chr4	-	9540	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_20	20.0292510703096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGCACATTTTTTTAA	-67696527	True	NA	-2	True	AATAAA	-21	NA	67701155	67612651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_71469.known	chr4	-	1664	13	FSM	ENSG00000033178.13	ENST00000420827.2	1664	13	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	21.6480689413372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAAGATTCTATTAT	-67696525	True	NA	NA	False	TATAAA	-20	NA	67701153	67661662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_71470.known	chr4	+	1609	4	FSM	ENSG00000248049.8	ENST00000664183.1	1609	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.49836585598797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGACTCTGTCTAAA	67700027	True	NA	NA	False	NA	NA	NA	67701336	67732722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67728539_67728687_67730073_67730171_67731505
transcript_71471.known	chr4	+	2595	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	21	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	67699951	True	NA	-12	True	NA	NA	NA	67701260	67723217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67720421_67721052_67721476
transcript_71473.nic	chr4	+	462	3	FSM	ENSG00000248049.8	ENST00000693410.1	477	3	11	4	-8	-4	multi-exon	FALSE	canonical	3	16	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCCTATGGTATTTTAA	67699985	True	NA	2	True	ATTAAA	-17	NA	67701294	67730198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67728539_67728687_67730073
transcript_71474.known	chr4	+	2233	2	FSM	ENSG00000248049.8	ENST00000506606.1	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTATTTGCGCTGGT	67700023	True	NA	6	True	ATTAAA	-14	NA	67701332	67722502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67720421
transcript_71476.known	chr4	+	1445	3	FSM	ENSG00000248049.8	ENST00000498917.2	1445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTTGCGCTGGTGTT	67699970	True	NA	9	True	AATAAA	-1	NA	67701279	67722505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67720421_67720633_67721476
transcript_71477.known	chr4	-	6233	17	FSM	ENSG00000083896.13	ENST00000344157.9	6233	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_16	52.0408493397254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTCTTAAACACAGACT	NA	False	NA	NA	False	AATAAA	-26	NA	68350090	68310386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_71478.known	chr4	-	2983	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	67.9719611310428	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATCTTTTGTATCTTTT	-68349330	True	NA	-6	True	AATAAA	-16	NA	68349753	68313323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_71479.nic	chr4	-	472	2	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	-17	24973	-16	-454	5prime_fragment	FALSE	canonical	3	172	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAGGGTATGTAAG	NA	False	NA	-12	True	GATAAA	-3	NA	68350106	68338293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_68338385_68349725
transcript_71480.known	chr4	+	2122	10	FSM	ENSG00000087128.10	ENST00000305363.9	2122	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.77123616632825	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTGACATTATGATAT	68447215	True	NA	3	True	AATAAA	-15	NA	68447462	68497604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_68447524_68461820_68461946_68466630_68466753_68468878_68468947_68471459_68471624_68474722_68474762_68476260_68476439_68477368_68477629_68478848_68478992_68496642
transcript_71485.known	chr4	-	477	2	FSM	ENSG00000272626.1	ENST00000608365.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGGCACTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	68906983	68901007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_68901376_68906874
transcript_71486.known	chr4	+	2020	1	FSM	ENSG00000132467.4	ENST00000254803.4	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATGTTCTGTGTGGT	70677305	True	NA	10	True	AATAAA	-22	NA	70688531	70690551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70688500_70690600
transcript_71488.nnic	chr4	-	2435	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	204.408903915656	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	-70831718	True	NA	-4	True	AATAAA	-32	NA	70839890	70819757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839502_70839701
transcript_71489.nnic	chr4	-	1545	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	0	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	204.408903915656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGATCTGATTTAAAAATA	-70831718	True	NA	-30	True	AATAAA	-31	NA	70839890	70820647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839502_70839701
transcript_71490.known	chr4	-	1765	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	213.053867876845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAATTTTGCTGTATT	-70831171	False	NA	NA	False	NA	NA	NA	70839343	70820374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
transcript_71494.known	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	212.752856097815	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	-70831331	False	NA	-4	True	AATAAA	-32	NA	70839503	70819757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
transcript_71498.known	chr4	+	760	6	FSM	ENSG00000173542.9	ENST00000502869.5	760	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	32.2527518205811	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATGAGACGTTATTTC	70899113	True	NA	NA	False	NA	NA	NA	70902325	70975254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70902551_70942822_70942883_70950699_70950812_70958873_70959041_70969930_70970025_70975152
transcript_71500.known	chr4	+	2506	7	FSM	ENSG00000156136.10	ENST00000286648.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	21.1581347634111	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	70993482	True	NA	20	True	AATAAA	-31	NA	70993648	71030914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70993927_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_71502.known	chr4	+	2683	7	FSM	ENSG00000156136.10	ENST00000503359.5	2683	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	86.3802961071306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	70992867	True	NA	20	True	AATAAA	-31	NA	70993562	71030914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70994018_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_71503.known	chr4	+	1964	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0332779621949	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTGTTGTTTTTCT	72031428	True	NA	5	True	TATAAA	-42	NA	72031999	72148305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
transcript_71505.known	chr4	+	1234	3	FSM	ENSG00000056291.19	ENST00000344413.6	1234	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAGTGTGATAATC	NA	False	NA	NA	False	ATTAAA	-29	NA	72031901	72147812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_72032201_72138039_72138140_72146977
transcript_71510.nnic	chr4	-	1736	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	0	-578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.7460085737335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACATTGATCTTGAGTTA	-73065000	True	NA	-8	True	AATAAA	-17	NA	73069726	73056657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_73057173_73057971_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_71511.known	chr4	-	1083	6	FSM	ENSG00000163626.17	ENST00000510031.1	1083	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	21.7568380055559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTCCAATAATTTTG	-73065000	True	NA	NA	False	AAGAAA	-5	NA	73069726	73058113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068134_73069316
transcript_71517.known	chr4	+	728	5	FSM	ENSG00000081051.8	ENST00000508838.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	10.6301458127346	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	NA	False	NA	NA	False	GATAAA	-16	NA	73450548	73455741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_71518.known	chr4	+	476	4	FSM	ENSG00000081051.8	ENST00000506820.1	476	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	12.4721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	73453363	False	NA	NA	False	AATAAA	-16	NA	73453489	73455777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73453631_73453764_73453898_73455235_73455291_73455630
transcript_71519.known	chr4	-	5882	11	FSM	ENSG00000169435.14	ENST00000307439.10	5882	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.22065556157337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTCCCTGATATAG	-73620391	True	NA	NA	False	ATTAAA	-16	NA	73620436	73571549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73582188_73582291_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_71520.known	chr4	-	2735	10	FSM	ENSG00000169435.14	ENST00000395777.6	2735	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.28620410031003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTACCCTAAGGCTG	-73620367	True	NA	NA	False	AATAAA	-9	NA	73620412	73574570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_71521.known	chr4	+	1537	4	FSM	ENSG00000124875.10	ENST00000226317.10	1537	4	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_3	6.94422221866655	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTGTTTCTCCTTCT	73835893	True	NA	4	True	AATAAA	-15	NA	73836677	73838760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73836860_73836963_73837097_73837202_73837287_73837622
transcript_71523.known	chr4	+	743	3	FSM	ENSG00000109272.4	ENST00000226524.4	743	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGACAGCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	73853295	73854483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73853463_73853782_73853910_73854034
transcript_71524.known	chr4	+	1174	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTAATTGT	73869274	True	NA	NA	False	NA	NA	NA	73869392	73871308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
transcript_71525.nnic	chr4	-	695	3	FSM	ENSG00000163737.5	ENST00000687529.1	715	3	17	3	17	-3	multi-exon	FALSE	canonical	3	13	junction_2	15	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTAGTATAGTCAAAATA	-73981580	True	NA	-14	True	AATAAA	-14	NA	73982010	73981076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73981292_73981416_73981544_73981657
transcript_71526.known	chr4	-	773	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTAAATAAATAAGACT	-73981597	True	NA	NA	False	AATAAA	-30	NA	73982027	73980810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73981292_73981416_73981544_73981862
transcript_71527.known	chr4	-	1307	3	FSM	ENSG00000163736.4	ENST00000296028.4	1307	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTCATCTATTATTA	-73988180	True	NA	NA	False	AATAAA	-14	NA	73988190	73986438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73987375_73987516_73987653_73987955
transcript_71528.known	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_3	17.4610678049451	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	-73997863	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
transcript_71533.known	chr4	-	1075	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1.69967317119759	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-74037993	True	NA	NA	False	AATAAA	-18	NA	74038689	74036588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
transcript_71534.known	chr4	+	2389	9	FSM	ENSG00000163738.19	ENST00000359107.10	2389	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	48.7697075549977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	74156427	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_71535.known	chr4	+	2355	8	FSM	ENSG00000163738.19	ENST00000325278.7	2355	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	7.34569150410425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	74156427	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_71536.nnic	chr4	+	1697	7	NNC	ENSG00000163738.19	novel	2354	8	NA	NA	3	82	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	8.21414768690107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGTATCATGGTACA	74156430	True	NA	NA	False	ATTAAA	-20	NA	74158120	74242292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74241418
transcript_71537.known	chr4	+	468	3	FSM	ENSG00000163738.19	ENST00000484725.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	78.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCAGGGCGGGATAT	74156484	True	NA	NA	False	NA	NA	NA	74158174	74162106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054_74160089_74161779
transcript_71539.known	chr4	+	2363	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	74156427	True	NA	18	True	ATTAAA	-19	NA	74158117	74162253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054
transcript_7154.known	chr1	+	665	3	FSM	ENSG00000159377.11	ENST00000466425.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_2	71.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	151400876	False	NA	14	True	AATAAA	-14	NA	151400900	151401937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151401356_151401541_151401631_151401816
transcript_71543.known	chr4	-	1863	1	FSM	ENSG00000269559.2	ENST00000600169.2	1863	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTTTATTCATATTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	74158373	74156510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_74156500_74158400
transcript_71544.known	chr4	+	5011	4	FSM	ENSG00000169116.11	ENST00000307428.7	5011	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	10.2089285540757	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTGTGGGTGATTC	74932072	True	NA	14	True	ATTAAA	-16	NA	74933115	75050113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74933371_75012424_75013151_75033882_75033962_75046162
transcript_71547.nnic	chr4	-	824	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42547	-18	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	19.09624744987	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	-75126574	True	NA	-20	True	AATAAA	-17	NA	75127264	75081942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127065
transcript_71548.nnic	chr4	-	714	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42503	-18	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	19.09624744987	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	-75126530	True	NA	-20	True	AATAAA	-17	NA	75127220	75081942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127131
transcript_7155.known	chr1	+	3033	12	FSM	ENSG00000143367.17	ENST00000368848.6	3033	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19594739606156	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	151539113	True	NA	14	True	AATAAA	-23	NA	151540307	151583583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_71550.nnic	chr4	-	733	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42551	-18	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_2	19.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	-75126578	True	NA	-20	True	AATAAA	-17	NA	75127268	75081942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75127065
transcript_71551.nnic	chr4	-	679	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	-18	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	20	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	-75126590	True	NA	-20	True	AATAAA	-17	NA	75127280	75081942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75127131
transcript_71555.known	chr4	-	728	9	FSM	ENSG00000163743.14	ENST00000513909.5	728	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	259.979055646796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTGTGAATCCTATAA	-75514164	False	NA	NA	False	NA	NA	NA	75514256	75482603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514154
transcript_71556.known	chr4	-	4408	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_5	18.0792526117647	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTACCCTTTGATCA	-75506525	True	NA	NA	False	AGTAAA	-24	NA	75514403	75479032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_71557.known	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	197.521359604474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-75506552	True	NA	NA	False	NA	NA	NA	75514430	75482412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
transcript_71559.known	chr4	-	1304	9	FSM	ENSG00000163743.14	ENST00000505105.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	202.854897340439	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-75506434	True	NA	-10	True	AATAAA	-14	NA	75514312	75482007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490664_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_7156.known	chr1	+	2946	11	FSM	ENSG00000143367.17	ENST00000392712.7	2946	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.5807573628499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	151539110	True	NA	14	True	AATAAA	-23	NA	151540304	151583583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_71560.known	chr4	-	1123	9	FSM	ENSG00000163743.14	ENST00000504085.5	1123	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	262.217347824281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACTGTGCTTGTGTT	-75506525	True	NA	NA	False	NA	NA	NA	75514403	75482341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491582_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514196
transcript_71565.known	chr4	-	1735	8	FSM	ENSG00000163743.14	ENST00000380840.6	1735	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	211.196397619247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACCTCTTACTTCAG	-75506408	True	NA	NA	False	NA	NA	NA	75514286	75481468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75514196
transcript_71566.known	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	5.76085931090146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_71568.known	chr4	+	655	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6.64997911442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATATGTAGTTCACT	75513470	True	NA	NA	False	AATAGA	-16	NA	75514488	75522050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
transcript_7157.known	chr1	+	6441	12	FSM	ENSG00000143376.14	ENST00000458013.7	6441	12	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	10.5140598507643	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	151606612	True	NA	28	True	AATAAA	-20	NA	151612049	151699080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
transcript_71572.known	chr4	+	4135	26	FSM	ENSG00000138768.15	ENST00000264904.8	4135	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	373.874130691066	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	75706551	True	NA	18	True	AATAAA	-19	NA	75724597	75814286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75760593_75760606_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75795335_75795357_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_71573.known	chr4	+	4123	24	FSM	ENSG00000138768.15	ENST00000514213.7	4123	24	0	0	0	0	multi-exon	TRUE	canonical	3	741	junction_5	157.630673130363	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	75706530	True	NA	18	True	AATAAA	-19	NA	75724576	75814286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_71579.known	chr4	-	5367	13	FSM	ENSG00000138757.15	ENST00000678971.1	5367	13	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_12	962.05040004265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715841	True	NA	NA	False	NA	NA	NA	75724456	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_71580.known	chr4	-	5385	13	FSM	ENSG00000138757.15	ENST00000678100.1	5385	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_12	940.450143400607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715870	True	NA	NA	False	NA	NA	NA	75724485	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_71582.known	chr4	-	4321	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	760.758983781959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	-75638818	True	NA	-20	True	AATAAA	-19	NA	75673411	75642785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_71584.known	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	771.367734493855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75724495	False	NA	NA	False	NA	NA	NA	75724589	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_71586.known	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	864.993679812577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75724454	False	NA	NA	False	NA	NA	NA	75724548	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_71587.known	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_11	805.250866921412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715762	True	NA	NA	False	NA	NA	NA	75724377	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_71594.known	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	618.109868874458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75672969	False	NA	NA	False	NA	NA	NA	75673205	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_71595.known	chr4	-	2609	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	0	0	0	multi-exon	FALSE	canonical	3	1778	junction_4	192.258263801585	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTAGCATATTATTTAT	-75638808	True	NA	-30	True	AGTAAA	-2	NA	75673401	75644388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_71596.known	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_10	565.804241765648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715860	True	NA	NA	False	NA	NA	NA	75724475	75641848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_7161.known	chr1	-	2318	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	83.3070175411269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTTTCTGAACTAG	-151786814	True	NA	NA	False	GATAAA	-15	NA	151790522	151771563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_71618.nnic	chr4	-	610	3	NIC	ENSG00000138757.15	novel	2441	2	NA	NA	-1	-79	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	47	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGCCTGACTTGCACTG	-75715871	True	NA	NA	False	AATAAA	-25	NA	75724486	75721966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_75722245_75724055_75724177_75724275
transcript_71620.nnic	chr4	-	508	2	NIC	ENSG00000138757.15	novel	276	2	NA	NA	1	158	intron_retention	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTCAGGTTAGTCTG	-75638820	True	NA	NA	False	NA	NA	NA	75673413	75662223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_75662526_75673207
transcript_71621.known	chr4	-	2441	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACATATAATCAAAATT	-75715812	True	NA	NA	False	CATAAA	-37	NA	75724427	75721887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75724177_75724275
transcript_71625.known	chr4	-	3003	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_12	33.8689618377021	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCTTTGTATGTGGAGT	-75986641	True	NA	-10	True	AATAAA	-20	NA	75990945	75949914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_71626.known	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_20	85.8056920026017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	-75986634	True	NA	-1	True	AATAAA	-29	NA	75990938	75949905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_71629.known	chr4	-	2513	21	FSM	ENSG00000198301.12	ENST00000395711.8	2513	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	94.9096807496474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACAGGACAATG	-75986633	True	NA	NA	False	NA	NA	NA	75990937	75950285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75981371_75981471_75981932_75982038_75990751
transcript_71633.nic	chr4	-	2044	21	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-15	6151	2	4056	5prime_fragment	FALSE	canonical	3	352	junction_11	33.5059323105626	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAGAGAAGAAAAAACAGA	-75986656	True	NA	NA	False	AAGAAA	-33	NA	75990960	75956065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_71642.nic	chr4	-	904	9	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-15	21470	2	0	5prime_fragment	FALSE	canonical	3	368	junction_8	28.0064166754692	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-75986656	True	NA	-28	True	AAGAAA	-21	NA	75990960	75971384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_71643.nic	chr4	-	1076	9	NIC	ENSG00000198301.12	novel	3080	22	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	177.379140191286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	NA	False	NA	-28	True	AAGAAA	-21	NA	75991001	75971384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990695
transcript_71644.nic	chr4	-	979	9	ISM	ENSG00000198301.12	ENST00000395710.5	3080	22	-22	21479	2	0	5prime_fragment	FALSE	canonical	3	36	junction_7	130.065788641749	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-75986656	True	NA	-28	True	AAGAAA	-21	NA	75990960	75971384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_71660.known	chr4	-	2249	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	47.4343391323798	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-76137487	True	NA	-5	True	AATAAA	-24	NA	76148397	76114663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_71669.known	chr4	-	1563	11	FSM	ENSG00000138750.15	ENST00000514987.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	184.565869000745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACCTCACAGCTC	-76137487	True	NA	NA	False	NA	NA	NA	76148397	76115205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144389_76144474_76148307
transcript_71671.known	chr4	-	1385	11	FSM	ENSG00000138750.15	ENST00000512151.5	1385	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	185.366555775307	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACCGACCACATGGA	-76137487	True	NA	NA	False	NA	NA	NA	76148397	76115300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_71674.nic	chr4	-	2251	11	NIC	ENSG00000138750.15	novel	2249	12	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	184.527748590828	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-76137597	True	NA	-5	True	AATAAA	-24	NA	76148507	76114663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_76115495_76117663_76117775_76118074_76118195_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_71681.known	chr4	-	1938	10	FSM	ENSG00000138750.15	ENST00000507257.5	1938	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	254.903225403265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGCTTTATTT	-76137506	True	NA	0	True	AATAAA	-29	NA	76148416	76114658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_71693.known	chr4	-	4471	12	FSM	ENSG00000138760.11	ENST00000639145.1	4471	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	64.4798642411876	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAACCCCTATTGGGGTT	-76211170	True	NA	NA	False	NA	NA	NA	76213876	76159002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181093_76195706_76195865_76213426
transcript_71695.nic	chr4	+	1566	8	NIC	ENSG00000189157.14	novel	1533	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	3.29501788419166	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTACTCTATTGCCTTT	76251595	True	NA	NA	False	AATAAA	-20	NA	76251729	76283780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268814_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_71697.known	chr4	+	2244	2	FSM	ENSG00000118804.9	ENST00000237642.7	2244	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTCTGAATTATTTG	76306247	True	NA	11	True	AATAAA	-22	NA	76306732	76311130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76306990_76309143
transcript_71700.known	chr4	+	628	3	FSM	ENSG00000138771.16	ENST00000466541.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGCAGCCATGTACC	76436048	False	NA	9	True	AATAAA	-23	NA	76436145	76559576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76436221_76555608_76555764_76559178
transcript_71703.known	chr4	+	5545	10	FSM	ENSG00000138758.12	ENST00000264893.11	5545	10	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_8	36.6272515424725	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGCCCTTTTTTGTG	76934994	True	NA	21	True	CATAAA	-33	NA	76949751	77038615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782_77030971_77034496
transcript_71705.known	chr4	+	2615	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_8	34.5570181005248	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGAGAGAGTTTTAAA	76934993	True	NA	NA	False	AATAAA	-19	NA	76949750	77032158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
transcript_71706.nic	chr4	+	1134	8	ISM	ENSG00000138758.12	ENST00000502584.5	2615	9	30	3472	15	-2150	5prime_fragment	FALSE	canonical	3	588	junction_2	32.8664583068005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAATGAGACAAAT	76935023	True	NA	NA	False	AAAAAG	-32	NA	76949780	77028686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628
transcript_71707.nnic	chr4	-	1690	8	NNC	ENSG00000118816.11	novel	2759	7	NA	NA	0	103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	303.272558761849	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCCAAAAGATCCAAAC	-77075829	True	NA	NA	False	CATAAA	-19	NA	77076309	77048011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_77048663_77055149_77055381_77055961_77056103_77056248_77056324_77058506_77058636_77066248_77066406_77075471_77075612_77076143
transcript_71708.nic	chr4	+	2655	8	NIC	ENSG00000138764.15	novel	1410	7	NA	NA	-184	1021	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	40.8656334834051	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTTGTTTGGGATCAC	77156702	False	NA	NA	False	AATAAA	-13	NA	77158112	77167205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_77158452_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_71711.nic	chr4	+	1285	9	NIC	ENSG00000169288.18	novel	1175	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	124.356279998237	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	77857259	True	NA	17	True	AATAAA	-19	NA	77862853	77952785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_71713.known	chr4	+	1175	9	FSM	ENSG00000169288.18	ENST00000315567.13	1175	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	39.4158518238538	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	77857235	True	NA	17	True	AATAAA	-19	NA	77862829	77952785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_71717.known	chr4	+	1432	13	FSM	ENSG00000138772.13	ENST00000264908.11	1432	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	20.637748585218	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTGTTTGCTTT	78550092	True	NA	25	True	AATAAA	-21	NA	78551769	78610447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_78551860_78554435_78554489_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_7172.known	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	39.622086293155	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786792	True	NA	-13	True	AATAAA	-14	NA	151790500	151773493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_71728.nnic	chr4	-	1491	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTTGTTTACTCATTT	-79559344	False	NA	2	True	CATAAA	-28	NA	79559357	79539914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_79541160_79559111
transcript_71730.nnic	chr4	-	691	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGAAGCCTGTGTCTAG	-79559344	False	NA	-8	True	ATTAAA	-16	NA	79559357	79540714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_79541160_79559111
transcript_71732.known	chr4	-	8419	17	FSM	ENSG00000163297.18	ENST00000403729.7	8419	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	4.97454457714473	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTCTGAAAGTCTCTG	NA	False	NA	NA	False	AATAAA	-31	NA	80073229	79901145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_79907468_79977620_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072408
transcript_71734.known	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.6332495807108	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	-81471588	True	NA	1	True	AATATA	-22	NA	81471907	81426392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
transcript_7174.known	chr1	-	2768	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	62.4946108787701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTCTAAAACCAAAT	-151786797	True	NA	-17	True	AATAAA	-10	NA	151790505	151773497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_71747.known	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1681	junction_7	1967.99113362861	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-82287574	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_71768.known	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	1196.8167140016	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	-82429263	True	NA	-26	True	AATAAA	-14	NA	82430408	82424629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_71770.known	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	897.887068344344	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	-82430380	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_71781.known	chr4	-	1143	5	FSM	ENSG00000152795.18	ENST00000514511.1	1143	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1228.50752948446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAAACGCTGTCCTGTG	-82411278	True	NA	-84	True	NA	NA	NA	82429425	82425582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82429247
transcript_71783.known	chr4	-	1291	8	FSM	ENSG00000152795.18	ENST00000602300.5	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	2208	junction_1	260.041676408586	4778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-82411294	True	NA	-25	True	AATAAA	-15	NA	82429441	82424628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_71784.known	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_4	208.249583166183	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	-82411250	True	NA	-21	True	AATAAA	-19	NA	82429397	82424624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_71786.known	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	99.9391815055537	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	82419235	True	NA	14	True	AAAACA	-24	NA	82430589	82461177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_71787.known	chr4	+	1874	6	FSM	ENSG00000145293.17	ENST00000509635.5	1874	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	236.86418049169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	82419293	True	NA	-12	True	NA	NA	NA	82430647	82461055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82430885_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_71788.known	chr4	+	1689	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	342.399620326892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	82419307	True	NA	20	True	AATAAA	-16	NA	82430661	82461087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
transcript_71792.known	chr4	-	4255	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_26	173.839942026529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82891233	False	NA	-5	True	ATTAAA	-13	NA	82891266	82818661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_71793.known	chr4	-	3861	26	FSM	ENSG00000138674.17	ENST00000509142.5	3861	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	208.116298256528	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82881021	True	NA	-5	True	ATTAAA	-13	NA	82891214	82818661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_71794.known	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_13	101.334558312223	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880943	True	NA	-4	True	ATTAAA	-14	NA	82891136	82818660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71795.known	chr4	-	3596	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	139.367613157513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTCCAAAGAAACATG	-82880955	True	NA	NA	False	NA	NA	NA	82891148	82819043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71797.known	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	159.809574772715	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880960	True	NA	-4	True	ATTAAA	-14	NA	82891153	82818660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71798.known	chr4	-	3397	21	FSM	ENSG00000138674.17	ENST00000508479.5	3397	21	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	163.05344982551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	-82880960	True	NA	NA	False	TTTAAA	-4	NA	82891153	82843684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71803.nic	chr4	-	1684	13	ISM	ENSG00000138674.17	ENST00000505984.5	3596	25	-92	38703	0	-2797	5prime_fragment	FALSE	canonical	3	332	junction_1	119.081292261491	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATCTGAATTTCTACC	-82881047	True	NA	NA	False	ATTAAA	-10	NA	82891240	82857746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71804.known	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_11	82.9622038806062	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-82880991	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71806.known	chr4	-	3909	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	192.563066032923	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82881066	True	NA	-5	True	ATTAAA	-13	NA	82891259	82818661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_71808.nic	chr4	-	1868	6	NIC	ENSG00000251022.6	novel	566	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	72.4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82899712_82899738_82900076_82900224_82900333
transcript_71809.nic	chr4	-	1830	6	NIC	ENSG00000251022.6	novel	566	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	54.9341423888641	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82899712_82899738_82900076_82900224_82900371
transcript_71810.known	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	12.3592070943083	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	82899217	True	NA	9	True	ATTAAA	-18	NA	82900734	82919969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
transcript_71811.known	chr4	-	2770	5	FSM	ENSG00000251022.6	ENST00000504520.6	2770	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	50.4876222454574	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTGAGCAATTCAGTT	-82900927	True	NA	NA	False	ATTAAA	-17	NA	82900960	82893008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900333
transcript_71812.nic	chr4	-	1805	5	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	52.4309069156733	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900371
transcript_71813.nic	chr4	-	1794	5	NIC	ENSG00000251022.6	novel	566	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	94.437810224507	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82899712_82899738_82900076_82900224_82900333
transcript_71816.known	chr4	-	516	4	FSM	ENSG00000251022.6	ENST00000511271.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	96.6413760019773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAACAACACGAATTCT	-82896694	True	NA	NA	False	NA	NA	NA	82900566	82894794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82894848_82895691_82895775_82900076_82900224_82900333
transcript_71818.nnic	chr4	-	1760	4	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	90.292118519097	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82897988_82898063_82900076_82900224_82900333
transcript_71820.known	chr4	-	971	3	FSM	ENSG00000251022.6	ENST00000512932.5	971	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	109.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTAAAGCACAAGAGGA	-82896687	True	NA	NA	False	AAAACA	-29	NA	82900559	82894249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82894848_82900076_82900224_82900333
transcript_71823.known	chr4	+	1702	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	213.812183937212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACTTTGTTTTTAGTT	83029845	True	NA	14	True	AATAAA	-23	NA	83035206	83075797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
transcript_71824.known	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	211.520897312771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	83029863	True	NA	-27	True	NA	NA	NA	83035224	83075756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
transcript_71827.known	chr4	+	1651	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_9	53.6354866865098	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	83029821	True	NA	35	True	AATAAA	-44	NA	83035182	83075818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
transcript_71832.known	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	2.48746859276655	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	-83109741	True	NA	NA	False	TATAAA	-25	NA	83109843	83090687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
transcript_71834.known	chr4	-	4652	13	FSM	ENSG00000173083.16	ENST00000405413.6	4652	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.67933735567218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-83335143	False	NA	NA	False	AATAAA	-20	NA	83335153	83292460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555_83334814_83335047
transcript_71835.known	chr4	-	4581	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	5.28212328957598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-83334580	True	NA	NA	False	AATAAA	-20	NA	83334848	83292460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
transcript_71837.known	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	-83334533	True	NA	NA	False	NA	NA	NA	83334801	83318929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83319470_83322218_83322365_83334555
transcript_71838.known	chr4	-	3315	17	FSM	ENSG00000163312.11	ENST00000510985.1	3315	17	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_14	10.5102256755029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACATTTCAGTTAT	-83454004	True	NA	-25	True	ATTAAA	-23	NA	83455823	83407372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83448782_83448962_83453230_83453946_83455396
transcript_71839.known	chr4	-	744	2	FSM	ENSG00000163312.11	ENST00000440639.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCTTACTGAATTACA	-83454004	True	NA	NA	False	AAAACA	-21	NA	83455823	83453756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83453946_83455268
transcript_71841.nic	chr4	-	1272	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-89	45817	-57	530	5prime_fragment	FALSE	canonical	3	52	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATAATATTAGTGCAA	-83454093	True	NA	-7	True	AATAAA	-19	NA	83455912	83453189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_83453946_83455396
transcript_71842.known	chr4	-	574	2	FSM	ENSG00000163312.11	ENST00000515482.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAGAGTGGATATGAA	-83454036	True	NA	NA	False	NA	NA	NA	83455855	83453719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83453946_83455507
transcript_7185.known	chr1	-	1264	7	FSM	ENSG00000143436.11	ENST00000467306.5	1264	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	229.626810765255	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-151750968	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762949_151763147_151763326
transcript_71852.known	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	9.52627944162882	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	-83481028	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
transcript_7186.known	chr1	-	1224	7	FSM	ENSG00000143436.11	ENST00000368830.8	1224	7	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_3	57.7429649394625	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-151750968	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_71873.known	chr4	-	682	6	FSM	ENSG00000163322.14	ENST00000511801.1	682	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	56.6483892092264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTTGGCCAGTCACT	-83481031	True	NA	NA	False	TATAAA	-12	NA	83485103	83470202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83483991_83484167_83484985
transcript_71874.known	chr4	+	1550	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_3	202.584895784459	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	83438958	True	NA	6	True	AATAAA	-21	NA	83456057	83462298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
transcript_71875.known	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	916.268277064941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	83438955	True	NA	29	True	AATAAA	-40	NA	83456054	83461237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
transcript_71876.known	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_2	732.705389293678	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	83438883	True	NA	25	True	AATAAA	-26	NA	83455982	83461423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
transcript_71877.known	chr4	-	1732	3	FSM	ENSG00000163322.14	ENST00000515303.2	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTCTATAATATATATAG	-83480993	True	NA	NA	False	AATAAA	-17	NA	83485065	83478807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83480369_83482153_83482245_83484985
transcript_71878.known	chr4	+	2928	12	FSM	ENSG00000138678.11	ENST00000264409.5	2928	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.7393671224217	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGCATTATTCCCC	NA	False	NA	NA	False	AATAAA	-16	NA	83536107	83605875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83536764_83544535_83544603_83581561_83581833_83587254_83587330_83588209_83588300_83590198_83590293_83594844_83594961_83596857_83596914_83597429_83597516_83598050_83598180_83598643_83598724_83604667
transcript_71879.nnic	chr4	+	670	4	NNC	ENSG00000180769.10	novel	3314	4	NA	NA	-19	-16248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.85861230093008	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTTAATAGCATTT	84966498	True	NA	NA	False	AATAAA	-19	NA	84966728	84970727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_84967128_84967609_84967641_84969724_84969877_84970639
transcript_71880.nnic	chr4	+	449	3	NNC	ENSG00000180769.10	novel	3270	4	NA	NA	0	-16248	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTTAATAGCATTT	84965556	True	NA	NA	False	AATAAA	-19	NA	84965649	84970727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_84965859_84969724_84969877_84970639
transcript_71884.known	chr4	+	2740	8	FSM	ENSG00000138639.18	ENST00000395183.6	2740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.67819144635296	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	85778639	True	NA	NA	False	ATTAAA	-13	NA	85778705	86001223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_85778966_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_71887.known	chr4	-	1610	5	FSM	ENSG00000163633.12	ENST00000462714.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.17944947177034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCATGATTTATATTC	-86892270	True	NA	NA	False	AATAAA	-23	NA	86892410	86886796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_86887894_86888120_86888276_86890047_86890139_86891455_86891594_86892281
transcript_7189.nic	chr1	-	1106	7	NIC	ENSG00000143436.11	novel	1224	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	218.450159583879	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTAAGTGTTGCTT	-151751007	True	NA	-12	True	AATAAA	-13	NA	151763535	151759653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_151760032_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_71891.known	chr4	-	766	4	FSM	ENSG00000163633.12	ENST00000506308.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATCTAAATGACAGTC	-86892276	True	NA	NA	False	NA	NA	NA	86892416	86887774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_86887894_86888120_86888276_86891455_86891594_86892062
transcript_71902.known	chr4	-	1782	7	FSM	ENSG00000198189.11	ENST00000358290.9	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	8.47873156131794	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGATGTGAGGCTCA	-87389267	True	NA	91	True	AATAAA	-30	NA	87391188	87336514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374698_87374831_87382254_87382363_87390860
transcript_71905.known	chr4	-	851	6	FSM	ENSG00000198189.11	ENST00000507286.1	851	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.1349163019538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAGTTTTCTGAAAACT	-87389228	True	NA	NA	False	TATAAA	-17	NA	87391149	87337274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87382254_87382363_87390860
transcript_7191.known	chr1	+	851	6	FSM	ENSG00000143450.19	ENST00000321531.10	851	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	1.72046505340853	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	151762907	True	NA	4	True	AATAAA	-15	NA	151762968	151771330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151768057_151768234_151770171_151770258_151771076
transcript_71910.nic	chr4	+	1371	8	NIC	ENSG00000170502.13	novel	2820	8	NA	NA	-54	429	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	111.876207096441	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTCATCTAGTTCT	NA	False	NA	9	True	AATAAA	-24	NA	87422518	87458347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_71912.known	chr4	+	2820	8	FSM	ENSG00000170502.13	ENST00000302174.9	2820	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	48.2108464381794	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	87419803	True	NA	3	True	AATAAA	-18	NA	87422572	87459455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87423013_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_71913.known	chr4	+	2458	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	116.637411297944	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	87419827	True	NA	2	True	AATAAA	-17	NA	87422596	87459454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_71915.known	chr4	+	951	7	FSM	ENSG00000170502.13	ENST00000440591.6	951	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	131.720664033148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCTTTATGCCAGTC	87420039	False	NA	NA	False	NA	NA	NA	87422808	87457918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87423013_87434980_87435221_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_71922.nic	chr4	-	1193	6	ISM	ENSG00000152583.13	ENST00000503414.5	2520	12	38165	-83	37692	0	3prime_fragment	FALSE	canonical	3	12	junction_2	2.68328157299975	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	87490927	87473334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490272_87490394_87490759
transcript_71925.known	chr4	+	1561	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	67.5074070010099	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	87974552	True	NA	17	True	AATAAA	-23	NA	87975713	87983411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
transcript_71927.known	chr4	+	1581	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_4	106.26306978438	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTTTGGTTTCAATT	87974505	True	NA	32	True	AATAAA	-38	NA	87975666	87983426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
transcript_71929.known	chr4	+	1196	6	FSM	ENSG00000118785.15	ENST00000360804.4	1196	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	158.6071877312	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAACTATCACTGTAT	87974552	True	NA	NA	False	ACTAAA	-38	NA	87975713	87983127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980392_87980435_87981474_87981799_87982491
transcript_71931.known	chr4	+	5089	15	FSM	ENSG00000118762.8	ENST00000237596.7	5089	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	41.2582706612769	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	88005046	True	NA	8	True	AATAAA	-18	NA	88007634	88077777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88046641_88046871_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
transcript_71932.known	chr4	-	4206	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	7.89767898393783	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTATGTATTCTTT	-88158610	False	NA	NA	False	AATAAA	-17	NA	88158639	88090268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
transcript_71936.known	chr4	-	6309	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	5.4594464513864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCAACTGTGT	-88283510	True	NA	-11	True	AATAAA	-18	NA	88284561	88257619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_71938.known	chr4	-	923	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	10.4690018626419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGCAACAGTTTT	-88283580	True	NA	NA	False	NA	NA	NA	88284631	88262576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
transcript_71947.known	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	6.40699514412642	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	NA	False	NA	30	True	AATAAA	-20	NA	88378851	88443097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_7195.known	chr1	-	882	6	FSM	ENSG00000143436.11	ENST00000368829.3	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	227.558695724861	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACTGGGGCAGGGAAG	-151750956	True	NA	NA	False	NA	NA	NA	151763484	151759874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151760182_151760815_151760900_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_71959.known	chr4	+	3511	23	FSM	ENSG00000138646.9	ENST00000264350.8	3511	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_14	14.3673758078261	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTCTTATTCACTA	88455334	True	NA	5	True	AATAAA	-17	NA	88457118	88506163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88486114_88486229_88487068_88487180_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494_88504598_88505672
transcript_71960.known	chr4	-	1311	2	FSM	ENSG00000145337.5	ENST00000273968.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88513291	True	NA	-16	True	AATAAA	-30	NA	88523776	88520997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88522030_88523497
transcript_71961.nnic	chr4	-	1389	2	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	-9549	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88533234	False	NA	-16	True	AATAAA	-30	NA	88533325	88520997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_88522030_88532968
transcript_71962.known	chr4	-	1917	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGACTCGGTACTGT	-88697216	True	NA	NA	False	AATAAA	-22	NA	88697829	88695912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88695900_88697800
transcript_71963.known	chr4	-	3169	18	FSM	ENSG00000138640.15	ENST00000508369.5	3169	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	10.4818181681771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACTAGCCAAACATAAAG	-88822901	True	NA	NA	False	GGGGCT	-11	NA	88823201	88727654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88822975
transcript_71966.known	chr4	-	2762	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.9849495089392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-89054508	True	NA	NA	False	AATAAA	-1	NA	89057162	88936282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_71968.nnic	chr4	-	1385	5	NNC	ENSG00000138640.15	novel	2206	5	NA	NA	5	2970	intron_retention	FALSE	canonical	3	5	junction_1	33.0785051052795	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGAGTAATGTTTAAGA	-89054526	True	NA	NA	False	AATAAA	-21	NA	89057180	88986653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_88987218_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_71970.known	chr4	-	2206	5	FSM	ENSG00000138640.15	ENST00000515600.1	2206	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	32.2984132737198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	NA	False	NA	-12	True	AATAAA	-8	NA	89057345	88989623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937_89056989_89057117
transcript_71971.nic	chr4	-	2602	4	ISM	ENSG00000138640.15	ENST00000512339.5	1511	6	-30	80916	5	0	5prime_fragment	FALSE	canonical	3	14	junction_1	33.95094500403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-89054526	True	NA	NA	False	AATAAA	-1	NA	89057180	88936282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_88938242_89020459_89020670_89029459_89029650_89056937
transcript_71972.nic	chr4	-	2170	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	165	0	5	0	intron_retention	FALSE	canonical	3	60	junction_3	16.391054470859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	-89054526	True	NA	-12	True	AATAAA	-8	NA	89057180	88989623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
transcript_71975.nic	chr4	-	822	3	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	165	30657	5	249	intron_retention	FALSE	canonical	3	60	junction_2	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGCAGAAAAAAAAAAACCA	-89054526	True	NA	NA	False	NA	NA	NA	89057180	89020280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_89020670_89029459_89029650_89056937
transcript_71976.known	chr4	+	3186	2	FSM	ENSG00000180346.5	ENST00000603357.3	3186	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACTTCCAAATTGAAA	89110813	True	NA	35	True	AATAAA	-29	NA	89111532	89114901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_89111884_89112066
transcript_71986.nnic	chr4	+	2122	4	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	18.006171781426	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	89678216	True	NA	8	True	AATAAA	-18	NA	89681504	89694130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_89681685_89686897_89687003_89691284_89691406_89692414
transcript_71987.nnic	chr4	+	2529	3	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	30.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTTGAACTTTATTTT	89678216	True	NA	10	True	AATAAA	-20	NA	89681504	89694132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_89681685_89691284_89691406_89691904
transcript_71988.known	chr4	+	2010	3	FSM	ENSG00000251095.8	ENST00000513572.3	2019	3	7	2	7	-2	multi-exon	FALSE	canonical	3	46	junction_2	13	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	89678223	True	NA	8	True	AATAAA	-18	NA	89681511	89694130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_89681685_89691284_89691406_89692414
transcript_71989.nic	chr4	+	719	3	FSM	ENSG00000251095.8	ENST00000691837.1	648	3	-71	0	-71	0	multi-exon	FALSE	canonical	2	38	junction_2	17	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	89678145	True	NA	7	True	AATAAA	-18	NA	89681433	89720172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_89681685_89691284_89691406_89719825
transcript_71990.nnic	chr4	+	1305	2	NNC	ENSG00000251095.8	novel	527	2	NA	NA	-4	-2499	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACATAAGATAGAGGAG	89678212	True	NA	NA	False	NA	NA	NA	89681500	89683950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_89681685_89682829
transcript_71992.nnic	chr4	+	1479	2	NIC	ENSG00000251095.8	novel	2422	2	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATCTGGCTGCTCA	89678215	True	NA	NA	False	CATAAA	-22	NA	89681503	89686710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_89681685_89685412
transcript_71993.known	chr4	+	2422	2	FSM	ENSG00000251095.8	ENST00000612706.1	2422	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTTCATATCTGGC	89678234	True	NA	NA	False	CATAAA	-16	NA	89681522	89686704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_89681685_89684444
transcript_71994.known	chr4	-	3177	6	FSM	ENSG00000145335.17	ENST00000394991.8	3177	6	0	0	0	0	multi-exon	TRUE	canonical	3	262	junction_2	14.1279864099595	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89835626	True	NA	NA	False	AATAAA	-21	NA	89837161	89724098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836961
transcript_71995.known	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	99.8050098942934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89838199	True	NA	NA	False	AATAAA	-21	NA	89838315	89724098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
transcript_71996.known	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	97.034014654656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	-89835604	True	NA	0	True	AATAAA	-23	NA	89837139	89726052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
transcript_71998.known	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	98.2213826007352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-89835633	True	NA	NA	False	NA	NA	NA	89837168	89726576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
transcript_72008.nnic	chr4	-	670	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-220	10954	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_1	400.699665862379	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGTACCTTTGAAATA	-92270231	True	NA	0	True	TATAAA	-18	NA	92277295	92257812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_92257958_92263190_92263356_92269242_92269357_92277049
transcript_72013.nnic	chr4	-	593	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-275	5589	at_least_one_novel_splicesite	FALSE	canonical	3	955	junction_1	50.5	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGCAGACATCTCCT	-92277332	False	NA	-13	True	ATTAAA	-16	NA	92277350	92263177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_92263356_92269242_92269357_92277049
transcript_72019.nnic	chr4	+	3963	2	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137500	-518308	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATATGGGTTATTTTTAA	92438880	True	NA	NA	False	GATAAA	-20	NA	92442156	92593939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_92442311_92590130
transcript_72020.known	chr4	-	592	3	FSM	ENSG00000248511.1	ENST00000504213.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTTTATAGATTTTT	-92304052	False	126	NA	False	AATAAA	-15	NA	92304178	92297250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_92297630_92300798_92300886_92304052
transcript_72021.known	chr4	+	2212	1	FSM	ENSG00000172238.6	ENST00000306011.6	2212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTGTCACTTATTC	93828718	True	NA	NA	False	AATAAA	-10	NA	93828752	93830964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_93828800_93831000
transcript_72022.known	chr4	+	5017	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	48.7145537850096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	94205838	True	NA	13	True	AATAAA	-16	NA	94207610	94291290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_72023.known	chr4	+	5094	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	41.8771269527262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	94204705	True	NA	15	True	AATAAA	-18	NA	94207864	94291292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_72028.nic	chr4	+	1352	5	ISM	ENSG00000163104.18	ENST00000510105.5	2409	17	-1	39648	0	-36189	5prime_fragment	FALSE	canonical	3	129	junction_1	37.2223051408695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATCACCTGACCCTA	94204705	True	NA	NA	False	ACTAAA	-11	NA	94207864	94237511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951
transcript_72029.known	chr4	+	6043	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_8	17.6231776047593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	94448321	True	NA	12	True	AATAAA	-23	NA	94451941	94668223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_72031.known	chr4	+	1853	12	FSM	ENSG00000163110.15	ENST00000627587.2	1853	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.0139320117034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTCCAGCTTTAAA	94448322	True	NA	NA	False	NA	NA	NA	94451942	94664186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_72035.nic	chr4	+	615	4	NIC	ENSG00000163110.15	novel	463	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	72.2403396079134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	94448243	True	NA	19	True	AATAAA	-30	NA	94451863	94549986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
transcript_72036.known	chr4	+	743	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	6.23609564462324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTAATAACATTTT	94448307	True	NA	NA	False	AATAAA	-30	NA	94451927	94573735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
transcript_72037.known	chr4	+	1189	3	FSM	ENSG00000163110.15	ENST00000359265.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	83	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAACGGAGTCTCCT	94448265	True	NA	2	True	ATTAAA	-16	NA	94451885	94457184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94456243
transcript_72039.known	chr4	+	463	3	FSM	ENSG00000163110.15	ENST00000511767.3	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	79	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	94455243	True	NA	19	True	AATAAA	-30	NA	94455266	94549986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94455385_94523723_94523876_94549793
transcript_7204.known	chr1	+	992	2	FSM	ENSG00000203288.5	ENST00000389897.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTGTCTGGCTTCC	151790575	True	NA	6	True	TATAAA	-20	NA	151790841	151794402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151791246_151793814
transcript_72044.nnic	chr4	-	1608	7	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_4	30.5650490302604	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	-97136787	True	NA	NA	False	NA	NA	NA	97141396	97107370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97107819_97108320_97108476_97110176_97110427_97111212_97111426_97134546_97134736_97139504_97139759_97141297
transcript_72049.nnic	chr4	-	1593	6	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	36.8477950493649	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGAGTTTTCTTGGGT	-97136787	True	NA	NA	False	AATAAA	-13	NA	97141396	97103806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97104239_97110020_97110427_97111212_97111426_97134546_97134736_97139504_97139759_97141297
transcript_72061.nnic	chr4	-	1145	6	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_4	17.9376698598229	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGGCTGACCTCTCTA	-97136806	True	NA	-19	True	ATTAAA	-16	NA	97141415	97107598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97107819_97108320_97108476_97110176_97110427_97111212_97111426_97134546_97134736_97141297
transcript_72068.nnic	chr4	-	2229	5	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_3	16.4069345095298	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	-97136806	True	NA	NA	False	NA	NA	NA	97141415	97107370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97107819_97108320_97108476_97109107_97110427_97134546_97134736_97141297
transcript_72073.nnic	chr4	-	1145	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	13.589211407093	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGAGTTTTCTTGGGT	-97136806	True	NA	NA	False	AATAAA	-13	NA	97141415	97103806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97104239_97110020_97110427_97134546_97134736_97141297
transcript_72078.nnic	chr4	-	1941	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	31.8852107828483	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTTGCTTATTTT	-97136787	True	NA	-33	True	AATAAA	-26	NA	97141396	97133340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97134736_97137789_97137983_97139504_97139759_97141297
transcript_72081.nnic	chr4	-	1870	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_3	40.5490101262931	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTTGCTTATTTT	-97136787	True	NA	-33	True	AATAAA	-26	NA	97141396	97133340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97134736_97139504_97139759_97139856_97139979_97141297
transcript_72083.nnic	chr4	-	1912	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	43.8406204335659	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTTGCTTATTTT	-97136854	True	NA	-33	True	AATAAA	-26	NA	97141463	97133340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97134736_97139504_97139759_97140501_97140599_97141297
transcript_72086.nnic	chr4	-	1833	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_2	14	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTTGCTTATTTT	-97136872	True	NA	-33	True	AATAAA	-26	NA	97141481	97133340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97134736_97139504_97139759_97141297
transcript_72088.nnic	chr4	-	1513	2	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTTGCTTATTTT	-97136806	True	NA	-33	True	AATAAA	-26	NA	97141415	97133340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97134736_97141297
transcript_7209.known	chr1	-	1832	7	FSM	ENSG00000159445.13	ENST00000471464.5	1832	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	24.3903441732356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGTACTGTTGTTT	-151908143	True	NA	NA	False	ATTAAA	-19	NA	151909502	151874054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982_151890215_151895007_151895195_151909359
transcript_72090.nnic	chr4	+	2483	15	NNC	ENSG00000138698.15	novel	757	7	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.845126818573	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTTTCTCCTTTTTC	98260809	True	NA	12	True	AATAAA	-24	NA	98260867	98442666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_98260982_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_72091.known	chr4	+	2092	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	28.6385817970607	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	98259177	False	NA	NA	False	NA	NA	NA	98261517	98442334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_72092.known	chr4	+	1942	14	FSM	ENSG00000138698.15	ENST00000408900.7	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	36.9732031541668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	98259177	False	NA	NA	False	NA	NA	NA	98261517	98442334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_72095.known	chr4	+	1686	13	FSM	ENSG00000138698.15	ENST00000264572.11	1686	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	44.4462846841243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCCCGATACACGGCA	98259090	True	NA	NA	False	NA	NA	NA	98261430	98442117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_72102.nic	chr4	+	1788	7	NIC	ENSG00000138698.15	novel	3747	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	57.6502866910092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATTTTTGCTGACT	98259043	True	NA	NA	False	AATAAA	-17	NA	98261383	98396909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98395940
transcript_72105.known	chr4	+	875	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	45.5438250479689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	98259162	False	NA	4	True	AGTAAA	-17	NA	98261502	98392252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
transcript_72108.known	chr4	+	941	5	FSM	ENSG00000138698.15	ENST00000511379.5	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	22.951034835057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGTAGCTTTAAAAT	98259119	True	NA	NA	False	AATAAA	-36	NA	98261459	98379490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016
transcript_72113.known	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	1071.44241895813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	-98908447	True	NA	NA	False	NA	NA	NA	98929125	98880844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
transcript_72118.known	chr4	-	1097	7	FSM	ENSG00000151247.13	ENST00000280892.10	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	886.90773665209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTGTAATAGTTCAG	-98908414	True	NA	NA	False	CATAAA	-12	NA	98929092	98880764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98928894
transcript_72123.known	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	362.245619557903	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	-98908455	True	NA	-3	True	AATAAA	-17	NA	98929133	98879275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_7213.known	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_4	20.2128671889962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	-151908152	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
transcript_72131.known	chr4	+	2686	11	FSM	ENSG00000164024.12	ENST00000296411.11	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_9	48.3297010129382	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	98982468	True	NA	24	True	ATTAAA	-21	NA	98995720	99062809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_72135.nic	chr4	+	2586	10	NIC	ENSG00000164024.12	novel	2686	11	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	176.867461013698	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	98982424	True	NA	24	True	ATTAAA	-21	NA	98995676	99062809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99057752_99057819_99061153
transcript_72149.known	chr4	-	2652	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_8	178.157760145327	5543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTGGTGGTAAGT	-99070257	True	NA	45	True	AATAAA	-22	NA	99088788	99070977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_72172.known	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_5	224.622883963322	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	-99070186	True	NA	NA	False	NA	NA	NA	99088717	99075224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_72175.known	chr4	-	722	5	FSM	ENSG00000197894.12	ENST00000508146.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	935.594196219707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCATCTTGCCCAG	-99070270	True	NA	NA	False	NA	NA	NA	99088801	99080448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99080726_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_72178.known	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2206	junction_5	81.1783016985861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	-99066685	False	NA	-59	True	CATAAA	-25	NA	99085216	99072185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
transcript_72179.nnic	chr4	+	1169	2	FSM	ENSG00000246090.8	ENST00000685116.1	1178	2	9	0	9	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAATTGATTTCTGTGA	99088397	True	NA	NA	False	AATAAA	-21	NA	99088847	99103112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_99089285_99102380
transcript_72181.known	chr4	-	3547	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	10.7684345971673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCTGCTGAAATACA	-99563766	True	NA	NA	False	AATAAA	-40	NA	99564039	99546710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
transcript_72183.known	chr4	-	3516	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	12.7471485406881	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTGCTGAAATACAGA	-99563744	True	NA	NA	False	AATAAA	-42	NA	99564017	99546708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
transcript_72191.known	chr4	-	4163	7	FSM	ENSG00000109270.13	ENST00000499666.7	4163	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_6	24.7616414821168	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTGGACATATGTGTAT	-99890523	True	NA	NA	False	AAGAAA	-31	NA	99894427	99878335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_72193.known	chr4	-	961	6	FSM	ENSG00000109270.13	ENST00000515100.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	149.554806007697	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTTTCCTTTGTACAT	-99890524	True	NA	NA	False	AATAAA	-13	NA	99894428	99881492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99894334
transcript_72195.known	chr4	-	1220	7	FSM	ENSG00000109270.13	ENST00000226522.8	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	148.612938721888	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGAGCACTGTATAGG	-99890472	True	NA	-44	True	AATAAA	-19	NA	99894376	99881206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99882068_99884061_99884126_99885541_99885655_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_72197.known	chr4	-	5967	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_5	14.7689691237944	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTATCATGTTT	-99946607	False	133369	NA	False	AATAAA	-23	NA	99946618	99896247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_7220.known	chr1	-	643	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	NA	False	NA	NA	False	AATAAA	-24	NA	151909637	151894829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151895195_151909359
transcript_72201.known	chr4	-	561	4	FSM	ENSG00000164031.17	ENST00000471738.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	66.001683480213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTGTTGTTTTGCGTG	-99946563	False	133369	2	True	AATAAA	-27	NA	99946574	99923680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99923878_99924759_99924816_99930449_99930622_99946438
transcript_72202.known	chr4	+	1647	2	FSM	ENSG00000245322.7	ENST00000666876.1	1647	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTGGAGAGGGATGAAA	99950516	False	NA	NA	False	AGTAAA	-25	NA	99950544	99952424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_99950681_99950913
transcript_72205.known	chr4	-	726	5	FSM	ENSG00000164032.12	ENST00000529158.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	5375.17381114323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTTATAGTAACAAACA	-99816930	True	NA	-119	True	TTTAAA	-28	NA	99950299	99948171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662_99949741_99950247
transcript_72208.known	chr4	-	868	5	FSM	ENSG00000164032.12	ENST00000651623.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5354.71331515516	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-99816911	True	NA	-35	True	AATAAA	-15	NA	99950280	99948087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99948524_99948813_99948941_99949272_99949387_99949662_99949741_99950167
transcript_72209.known	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-100189900	True	NA	-1	True	AATAAA	-18	NA	100190468	100185869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_100188168_100189892_100190033_100190302
transcript_72210.known	chr4	+	442	2	FSM	ENSG00000254531.2	ENST00000529296.2	648	2	40	166	16	-162	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCGCCACAGAGTC	101347442	True	NA	NA	False	NA	NA	NA	101347791	101348721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_101347836_101348323
transcript_72211.known	chr4	+	790	2	FSM	ENSG00000254531.2	ENST00000527564.2	822	2	28	4	4	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	101347430	True	NA	25	True	AATAAA	-15	NA	101347779	101348883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_101348010_101348323
transcript_72212.known	chr4	+	3322	17	FSM	ENSG00000153064.12	ENST00000322953.9	3322	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	2.42383992870816	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTATTGGCCAATAAA	101790666	True	NA	NA	False	AATAAA	-31	NA	101790729	102074812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_101790951_101829807_101830207_101855034_101855190_101862525_101862665_101870504_101870645_101895304_101895411_101917992_101918190_102021513_102021593_102025200_102025510_102029959_102030266_102043838_102043908_102060210_102060390_102063074_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
transcript_72213.known	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.150157901031	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-102345117	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
transcript_72214.nic	chr4	-	2682	8	NIC	ENSG00000138821.14	novel	3152	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_7	90.7114735222145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-102342924	True	NA	-2	True	ATTAAA	-42	NA	102345484	102261665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102345344
transcript_72218.nnic	chr4	-	678	3	NIC	ENSG00000248161.5	novel	610	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	-102431136	True	NA	2	True	ATTAAA	-21	NA	102431250	102418601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_102418989_102430396_102430499_102431061
transcript_72219.known	chr4	-	608	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	2	True	ATTAAA	-21	NA	102431282	102418601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102418989_102431061
transcript_7222.known	chr1	-	616	3	FSM	ENSG00000197747.9	ENST00000368809.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	672.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACAGAATGTTT	-151992548	False	NA	-15	True	AATAAA	-21	NA	151992578	151982917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151983325_151986098_151986252_151992522
transcript_72220.known	chr4	-	4001	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_11	19.6284829711825	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCTCAAGGGCTGGG	-102758342	True	NA	NA	False	AATAAA	-7	NA	102760968	102630769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_72221.known	chr4	-	2577	16	FSM	ENSG00000109323.11	ENST00000505239.1	2577	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	43.3596842956936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACAGAGACAAGGAGAG	-102758307	True	NA	NA	False	AATAAA	-30	NA	102760933	102631987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102723861_102723968_102726588_102726684_102760717
transcript_72224.known	chr4	-	582	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCTGTGTATGTTG	-102758368	True	NA	NA	False	AATGAA	-20	NA	102760994	102753690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102753996_102760717
transcript_72229.known	chr4	-	574	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_7	1400.5882291934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	-102825762	False	4107	-61	True	NA	NA	NA	102825780	102797398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
transcript_7223.known	chr1	-	671	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_1	44.5	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAATGTTTGTT	-151975848	True	NA	-12	True	AATAAA	-24	NA	151993859	151982914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151983325_151986098_151986252_151993751
transcript_72230.known	chr4	-	577	8	FSM	ENSG00000109332.20	ENST00000507845.5	577	8	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_7	1401.18046442189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTGGAATAAACTTTAA	-102825767	False	4107	-47	True	NA	NA	NA	102825785	102797384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825737
transcript_72232.known	chr4	-	3729	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	0	0	0	multi-exon	FALSE	canonical	1	1098	junction_3	787.039816952985	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	-102806629	True	NA	-1	True	ATTAAA	-18	NA	102827551	102794382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_72233.known	chr4	-	2368	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102827930	False	NA	-16	True	AATAAA	-17	NA	102827948	102795975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
transcript_72234.known	chr4	-	838	8	FSM	ENSG00000109332.20	ENST00000349311.12	838	8	0	0	0	0	multi-exon	FALSE	canonical	1	80	junction_7	1178.36457059116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	-102827831	False	98	74	True	NA	NA	NA	102827849	102797263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827734
transcript_72235.known	chr4	-	2227	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	0	0	0	multi-exon	FALSE	canonical	1	491	junction_7	1067.21143401763	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102828141	False	NA	-16	True	AATAAA	-17	NA	102828159	102795975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
transcript_72236.known	chr4	-	896	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	0	0	0	multi-exon	TRUE	canonical	1	53	junction_7	1185.91247913295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTTCTTCCAGCTT	-102868180	True	NA	-83	True	NA	NA	NA	102868875	102797251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
transcript_7225.known	chr1	-	563	3	FSM	ENSG00000163191.6	ENST00000271638.3	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	4544	junction_2	134.5	1771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAGTTGGTGAATTTG	-152014754	True	NA	-2	True	AATAAA	-27	NA	152037004	152032505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_152032824_152033647_152033801_152036912
transcript_7226.known	chr1	+	619	2	FSM	ENSG00000169469.9	ENST00000307098.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTGTGTGTCATTG	153031192	True	NA	NA	False	ATTAAA	-17	NA	153031202	153032900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153031248_153032326
transcript_72263.known	chr4	-	527	7	FSM	ENSG00000109332.20	ENST00000505207.5	527	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	1264.18533275606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACTGTTCCTTTTTTG	-102825762	False	4107	-29	True	AATAAA	-5	NA	102825780	102797366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825721
transcript_72264.known	chr4	-	711	7	FSM	ENSG00000109332.20	ENST00000350435.11	711	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1265.67471027204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCCAGCTTTGGAC	-102825842	False	NA	-78	True	NA	NA	NA	102825860	102797246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825737
transcript_72265.known	chr4	-	660	7	FSM	ENSG00000109332.20	ENST00000357194.10	660	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	1262.99454560272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	-102868201	True	NA	-19	True	AATAAA	-15	NA	102868896	102797356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102868714
transcript_7227.nnic	chr1	-	860	4	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-196	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	202.000550054257	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534509	False	NA	-8	True	AATAAA	-20	NA	153536440	153534598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_153534831_153535201_153535361_153535788_153535934_153536116
transcript_7228.known	chr1	-	434	3	FSM	ENSG00000197956.10	ENST00000368719.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	41.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534060	False	1931	-8	True	AATAAA	-20	NA	153535991	153534598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153534831_153535201_153535361_153535948
transcript_72280.known	chr4	+	883	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	444	24	-233	-24	multi-exon	FALSE	canonical	2	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTTTGCAGTCCACT	102828033	False	NA	-21	True	NA	NA	NA	102828054	102844075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102828186_102843323
transcript_72285.known	chr4	+	471	4	FSM	ENSG00000145354.12	ENST00000574446.1	471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	467.761572693706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACATAATAAACACAATGAA	102860353	True	NA	NA	False	NA	NA	NA	102869053	102887359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869188_102882770_102882874_102885215_102885431_102887340
transcript_72288.known	chr4	+	852	4	FSM	ENSG00000145354.12	ENST00000646632.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	466.739994239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCTATGGATCCAAAG	102860273	True	NA	NA	False	AATAAA	-34	NA	102868973	102887681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869188_102882791_102882874_102885215_102885431_102887340
transcript_7229.nnic	chr1	-	547	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	206	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534341	False	NA	-8	True	AATAAA	-20	NA	153536272	153534598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_153534831_153535201_153535361_153536116
transcript_72291.known	chr4	+	5878	3	FSM	ENSG00000145354.12	ENST00000273986.10	5878	3	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_1	23	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATTTCCTGTAATT	102860291	True	NA	NA	False	AATAAA	-19	NA	102868991	102892807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869188_102885215_102885431_102887340
transcript_72303.nnic	chr4	-	1107	11	NNC	ENSG00000164039.15	novel	2920	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	125.488007395129	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-103096456	True	NA	-8	True	AATAAA	-15	NA	103099862	103079476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103085698_103085743_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_72307.nic	chr4	-	1261	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	121.72612702292	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	NA	False	NA	-8	True	AATAAA	-15	NA	103099901	103079476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_72308.known	chr4	-	1742	10	FSM	ENSG00000164039.15	ENST00000475058.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	97.1799908277622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTGTAATCTCTTCT	-103096410	True	NA	35	True	NA	NA	NA	103099816	103079532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103085698_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_7231.known	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	212.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534284	False	NA	-8	True	AATAAA	-20	NA	153536215	153534598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153534831_153535201_153535376_153535948
transcript_72310.known	chr4	-	2920	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_9	24.504471751141	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGATCTGAGTTAGTCT	-103096428	True	NA	NA	False	AATAAA	-38	NA	103099834	103077591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_72315.known	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	24.8215506163495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-103096422	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_72316.nnic	chr4	-	1007	9	NIC	ENSG00000164039.15	novel	2046	9	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	107.299813606548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	NA	False	NA	-8	True	AATAAA	-15	NA	103099920	103079476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_72318.known	chr4	-	8260	53	NNC	ENSG00000138778.14	novel	8541	49	NA	NA	36	-236	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	41.0888910467978	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGATAGCAATACCTT	-103196702	True	NA	-66	True	AATGAA	-19	NA	103198409	103106046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136172_103136279_103136360_103138350_103138450_103139788_103139942_103139942_103139952_103139952_103139962_103139962_103140080_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_72319.known	chr4	-	8742	47	FSM	ENSG00000138778.14	ENST00000380026.8	8742	47	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_31	37.5473236368098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTGTGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	103198445	103105348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138453_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_7232.known	chr1	-	673	4	FSM	ENSG00000197956.10	ENST00000368720.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.703943940144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534313	False	1931	-8	True	AATAAA	-20	NA	153536244	153534598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153534831_153535201_153535361_153535788_153535934_153536107
transcript_72321.nic	chr4	-	1652	16	ISM	ENSG00000138778.14	ENST00000265148.9	8541	49	-65	69009	37	2220	5prime_fragment	FALSE	canonical	3	31	junction_6	7.25227933518529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATGGAATTGAAATT	-103196701	True	NA	NA	False	NA	NA	NA	103198408	103174819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_72329.known	chr4	+	881	4	FSM	ENSG00000248740.7	ENST00000656104.1	881	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.08248290463863	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	103255555	True	NA	7	True	AATAAA	-16	NA	103255825	103453755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_103256295_103343091_103343236_103436934_103437047_103453599
transcript_72331.known	chr4	-	5569	3	FSM	ENSG00000168772.11	ENST00000394767.3	5569	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTATTTTTCCATGAT	-104494771	True	NA	-3	True	AATAAA	-19	NA	104494894	104468307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_104472367_104490743_104492060_104494700
transcript_72334.known	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	209.071758016237	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-105468451	True	NA	-2	True	AATAAA	-21	NA	105474014	105369560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
transcript_72339.known	chr4	-	1665	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_6	44.8396592462779	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	-105468499	True	NA	-11	True	AATAAA	-18	NA	105474062	105369076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_7234.known	chr1	-	537	3	FSM	ENSG00000196154.12	ENST00000468373.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	81	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543875	True	NA	1	True	AATAAA	-25	NA	153545806	153543612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543940_153544653_153544810_153545752
transcript_72342.nic	chr4	-	1112	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_10	160.182520894135	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468499	True	NA	-6	True	AATAAA	-17	NA	105474062	105369564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
transcript_72344.known	chr4	-	1414	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	155.354562211736	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	-105468501	True	NA	NA	False	NA	NA	NA	105474064	105369242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_72346.known	chr4	-	1072	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	174.638674601781	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468504	True	NA	-6	True	AATAAA	-17	NA	105474067	105369564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
transcript_7235.known	chr1	-	573	3	FSM	ENSG00000196154.12	ENST00000368715.5	573	3	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	93	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543132	False	1931	1	True	AATAAA	-25	NA	153545063	153543612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653_153544810_153544957
transcript_72353.known	chr4	-	859	8	FSM	ENSG00000138777.20	ENST00000432483.6	859	8	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_6	198.378734870902	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468487	True	NA	-6	True	AATAAA	-17	NA	105474050	105369564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105456680_105456746_105473893
transcript_72357.known	chr4	-	842	8	FSM	ENSG00000138777.20	ENST00000502833.5	842	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	190.234763663539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGAAGTGCATGTAACCT	-105468496	True	NA	NA	False	NA	NA	NA	105474059	105423203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105423382_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_72359.known	chr4	-	667	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_5	215.577920947392	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468487	True	NA	-6	True	AATAAA	-17	NA	105474050	105369564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
transcript_72361.known	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	31.8070353852729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	-105468496	True	NA	0	True	AATAAA	-18	NA	105474059	105446201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_72363.known	chr4	-	1356	9	FSM	ENSG00000138777.20	ENST00000509426.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	182.484930884717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGAGGGCTTTGTCT	-105468496	True	NA	NA	False	ATTAAA	-11	NA	105474059	105398303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105398868_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_72367.known	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	55.9022470432969	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-105706684	True	NA	-4	True	AATAAA	-17	NA	105708689	105682626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
transcript_72369.known	chr4	-	1975	7	FSM	ENSG00000138785.16	ENST00000451321.6	1975	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	35.9768444048854	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	105709108	105682626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105708637
transcript_7237.known	chr1	-	513	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	19.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGATGGTTTGAGAGA	-153543875	True	NA	-7	True	AATAAA	-17	NA	153545806	153543620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653_153544810_153545752
transcript_72370.known	chr4	+	4304	12	FSM	ENSG00000138780.15	ENST00000515279.6	4304	12	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.00743525238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	105705576	True	NA	9	True	AATAAA	-21	NA	105708783	105847725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
transcript_72374.known	chr4	+	2228	6	FSM	ENSG00000138780.15	ENST00000484843.1	2228	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.4995237987254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	105705579	True	NA	NA	False	TTTAAA	-3	NA	105708786	105823690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953
transcript_72378.known	chr4	-	7961	26	FSM	ENSG00000145348.17	ENST00000394708.7	7961	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	22.1810730128188	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTCTAATTGGTAC	-106313266	True	NA	NA	False	AATAAA	-14	NA	106316209	106041598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315930
transcript_7238.known	chr1	-	755	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543166	False	1931	1	True	AATAAA	-25	NA	153545097	153543612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653
transcript_72384.known	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	290.788933905045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	106308581	True	NA	-37	True	AATAAA	-12	NA	106316549	106347704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_72388.known	chr4	+	2773	7	FSM	ENSG00000164022.18	ENST00000672341.1	2773	7	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	64.0947649101617	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCATCATCAGTAG	106308581	True	NA	42	True	AATAAA	-28	NA	106316549	106349456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_7239.known	chr1	-	566	4	FSM	ENSG00000196154.12	ENST00000354332.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	94.5386458309804	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543871	True	NA	1	True	AATAAA	-25	NA	153545802	153543612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653_153544810_153545469_153545519_153545752
transcript_72391.known	chr4	+	2710	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.272129668665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	106308586	True	NA	-34	True	AATGAA	-24	NA	106316554	106349183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_72393.known	chr4	+	2001	1	FSM	ENSG00000164022.18	ENST00000682186.1	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAATTACTATATTC	106308554	True	NA	NA	False	AAGAAA	-10	NA	106316522	106318523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316500_106318500
transcript_72394.known	chr4	+	1101	7	FSM	ENSG00000164022.18	ENST00000684504.1	1101	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	232.320002008724	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGGCTCATTTTTGC	106308567	True	NA	30	True	AATAAA	-31	NA	106316535	106347771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337042_106347530
transcript_72398.known	chr4	-	2513	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_6	37.3358666987759	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGATCTATTTTATA	-107716537	True	NA	-8	True	AATAAA	-21	NA	107720234	107613665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_72406.nnic	chr4	-	1150	6	NNC	ENSG00000138801.9	novel	579	5	NA	NA	-65	-10543	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	148.654498754663	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTGTGTTCACAGTT	-107720263	False	NA	-21	True	AATAAA	-41	NA	107720299	107670502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_107670864_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_72408.known	chr4	+	1964	9	FSM	ENSG00000138796.18	ENST00000639146.1	1964	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	144.566107283139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTAATTTAGGCAG	107983024	True	NA	2	True	TATAAA	-32	NA	107989836	108035149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108027938_108028070_108033175_108033293_108034238
transcript_72410.known	chr4	+	1895	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	143.160748810559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	107983089	True	NA	-44	True	NA	NA	NA	107989901	108035022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_72414.known	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	29.4465964215956	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	107983076	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_72416.known	chr4	+	2103	8	FSM	ENSG00000138796.18	ENST00000640201.2	2103	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	116.921742535557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATACACTCAAATGATT	107983034	True	NA	-27	True	TATAAA	-3	NA	107989846	108035120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108028070_108033175_108033293_108034238
transcript_72419.known	chr4	+	1507	7	FSM	ENSG00000138796.18	ENST00000639698.1	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	125.001333326222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAATTGTAATACACTC	107983240	False	NA	-35	True	NA	NA	NA	107990052	108035112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108033175_108033293_108034238
transcript_72421.known	chr4	+	1327	7	FSM	ENSG00000138796.18	ENST00000639335.1	1327	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	131.77938213376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATAGTCTGTGAAGC	107983016	True	NA	NA	False	NA	NA	NA	107989828	108034762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_72423.known	chr4	+	1752	9	FSM	ENSG00000138796.18	ENST00000403312.6	1752	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	147.958978690041	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAATACACTCAAATGA	107983083	True	NA	-29	True	TATAAA	-1	NA	107989895	108035118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108028860_108028870_108033175_108033293_108034238
transcript_72432.known	chr4	+	529	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	9656.2793171076	4854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	108452908	True	NA	16	True	AATAAA	-43	NA	108620589	108625255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_72433.known	chr4	+	560	6	FSM	ENSG00000109475.17	ENST00000502534.5	560	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9787.44254644695	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATATTTTAGTAGAGAC	108452887	True	NA	NA	False	NA	NA	NA	108620568	108625554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108625430
transcript_72434.known	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	11285.2901885596	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	108452974	True	NA	39	True	TATAAA	-25	NA	108620655	108630412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
transcript_72437.known	chr4	+	663	5	FSM	ENSG00000198856.13	ENST00000512478.2	663	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1242.34543807268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGGAAGCGTATTGAA	108622951	True	NA	65	True	AGTAAA	-17	NA	108650646	108667395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108663232_108663307_108667246
transcript_7244.known	chr1	-	956	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	80	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTCCCTCCCTGGGGG	-153609151	False	1024	NA	False	NA	NA	NA	153609344	153607361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153607693_153607998_153608178_153608898
transcript_72442.known	chr4	+	1062	4	FSM	ENSG00000198856.13	ENST00000361564.9	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	106.220943739401	3535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTATATTTGTTTTT	108622903	True	NA	18	True	AATAAA	-17	NA	108650598	108667820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108667246
transcript_72446.known	chr4	+	876	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	1246	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	108622889	True	NA	16	True	AATAAA	-15	NA	108650584	108667818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108650795_108655563_108655658_108667246
transcript_72448.known	chr4	-	2086	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.782634642844	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAAAAATTACTAG	-108762927	True	NA	NA	False	AATAAA	-14	NA	108763053	108742052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
transcript_7245.known	chr1	-	1146	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	73	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153609144	False	1024	-6	True	ATTAAA	-21	NA	153609337	153606885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153607693_153607998_153608178_153609177
transcript_72451.nnic	chr4	-	1068	4	NIC	ENSG00000247950.8	novel	957	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	6.0184900284226	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCACTTATGTTGATG	-109433596	True	NA	NA	False	AATAAA	-24	NA	109433764	109429962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_109430781_109431691_109431747_109431940_109432105_109433733
transcript_72453.known	chr4	+	2230	8	FSM	ENSG00000005059.16	ENST00000394650.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	33.3839751365587	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATACAAGTTAAATCAG	109558027	True	NA	86	True	AATAAA	-18	NA	109560245	109688719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_72458.known	chr4	-	1634	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	32.3625297733866	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-109698229	True	NA	-26	True	AATAAA	-15	NA	109703445	109688627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
transcript_7246.known	chr1	-	1172	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	28	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153612113	True	NA	-6	True	ATTAAA	-21	NA	153613137	153606885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153607693_153607998_153608178_153612951
transcript_72462.known	chr4	-	1347	4	FSM	ENSG00000138794.10	ENST00000352981.7	1347	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	191.942699783034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	-109698203	True	NA	-20	True	AATAAA	-21	NA	109703419	109688621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109703355
transcript_72464.known	chr4	-	364	1	FSM	ENSG00000272795.1	ENST00000609440.1	364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGTGTGTGTAATTT	-109815385	True	NA	NA	False	ATTAAA	-14	NA	109815410	109815046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_109815000_109815400
transcript_72469.known	chr4	+	1011	7	FSM	ENSG00000109534.17	ENST00000394631.7	1011	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.820090208694	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAGTGTGTTTATTAA	109812511	True	NA	21	True	AATAAA	-21	NA	109815509	109824740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_109815546_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_7247.known	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.55902608401044	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153616132	True	NA	3	True	AATAAA	-21	NA	153616325	153614254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
transcript_72471.known	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	73.5746031061142	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109813084	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_72473.nic	chr4	+	1192	7	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	24	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_1	136.135247293108	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109813108	False	NA	18	True	AATAAA	-18	NA	109815785	109824737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_109816006_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_72477.nnic	chr4	+	1039	6	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	155.900481076872	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109812513	True	NA	18	True	AATAAA	-18	NA	109815511	109824737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_109815805_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_7248.known	chr1	-	1025	3	FSM	ENSG00000189334.9	ENST00000476873.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153615745	False	NA	3	True	AATAAA	-21	NA	153615938	153614254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153615023_153615234_153615382_153615828
transcript_72485.known	chr4	-	610	5	FSM	ENSG00000170522.10	ENST00000506625.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	131.744070075279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCCTGCACTGGTATC	-110198892	False	NA	NA	False	NA	NA	NA	110199009	110051725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198841
transcript_72487.known	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	6.16441400296898	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-110183687	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
transcript_72493.known	chr4	-	204	2	FSM	ENSG00000170522.10	ENST00000513003.1	204	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGATTTGGGTTTTCT	-110198249	False	NA	NA	False	NA	NA	NA	110198366	110197890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110197975_110198246
transcript_72499.known	chr4	-	448	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	9	-43	-9	multi-exon	FALSE	canonical	3	25	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	-110615089	False	NA	-14	True	AATAAA	-19	NA	110615458	110595512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110595809_110615306
transcript_72500.nnic	chr4	-	1176	2	FSM	ENSG00000250103.3	ENST00000690430.1	1194	2	26	-8	26	8	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCGTGACTTGCCTTGAAA	-110615001	True	NA	NA	False	AATAAA	-30	NA	110615577	110602527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110603433_110615306
transcript_72503.known	chr4	-	1608	3	FSM	ENSG00000164093.18	ENST00000645131.1	1608	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110621723	False	NA	-2	True	AGTAAA	-17	NA	110621734	110617422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110618689_110621163_110621370_110621598
transcript_72504.known	chr4	-	2294	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110622708	True	NA	-2	True	AGTAAA	-17	NA	110623077	110617422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110618689_110621163_110621370_110622255
transcript_72505.nnic	chr4	-	1793	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	902	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110619803	False	92	-2	True	AGTAAA	-17	NA	110619814	110617422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_110618689_110619287
transcript_72507.known	chr4	-	2036	1	FSM	ENSG00000260526.1	ENST00000562919.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAGTAATTATTTCA	-112231410	False	186	NA	False	AATAAA	-23	NA	112231596	112229560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112229600_112231600
transcript_72510.known	chr4	+	5915	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_9	20.6062438098412	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCATCTGATTCTTGA	112227910	True	NA	NA	False	AATAAA	-18	NA	112231786	112273110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_72513.known	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	-112285692	True	NA	0	True	NA	NA	NA	112285904	112274536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112278435_112285639
transcript_72518.known	chr4	-	794	6	FSM	ENSG00000138658.16	ENST00000503172.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	21.3222888077242	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGAACATTGTGACTT	-112634024	True	NA	NA	False	AATATA	-9	NA	112636898	112619517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
transcript_72530.known	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	121.166552040294	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635413	True	NA	17	True	AATAAA	-17	NA	112637126	112657586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_72532.known	chr4	+	2107	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	96.0167809407409	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635429	True	NA	17	True	AATAAA	-17	NA	112637142	112657586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_72536.known	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	112.186940961157	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	112635742	False	NA	23	True	AATAAA	-23	NA	112637455	112657592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_72557.known	chr4	+	1047	7	FSM	ENSG00000174720.17	ENST00000505034.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	140.094511749113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATGCAGAATCCCT	112635742	False	NA	NA	False	NA	NA	NA	112637455	112647449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198
transcript_72577.nnic	chr4	-	399	3	NNC	ENSG00000249532.6	novel	389	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7187	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-112648730	False	NA	-16	True	AATAAA	-15	NA	112648740	112646722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_112646969_112647414_112647481_112648653
transcript_72584.known	chr4	+	424	2	FSM	ENSG00000174720.17	ENST00000504079.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCACGCCTGTA	112635479	False	NA	NA	False	ATTAAA	-19	NA	112637192	112638020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637240_112637643
transcript_72586.known	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	7130	junction_1	0	3480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-112646294	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112646969_112648653
transcript_72587.known	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	9509	junction_2	2432.5	6657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-112646290	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112646969_112647414_112647468_112648653
transcript_72588.known	chr4	+	2076	14	FSM	ENSG00000174720.17	ENST00000651579.1	2076	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	143.16833308254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAATGTGTTTTGAAC	112637088	True	NA	-7	True	NA	NA	NA	112637569	112657562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637604_112638617_112638674_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_72589.known	chr4	-	740	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATATATTTTATATA	-112706197	True	NA	-28	True	TTTAAA	-8	NA	112706810	112693046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112693686_112706709
transcript_72592.known	chr4	-	348	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3078	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	113214393	113214045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_113214000_113214400
transcript_72595.known	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	36.3262990132493	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	114598168	False	NA	NA	False	AATAAA	-17	NA	114598806	114678225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_72605.known	chr4	-	2023	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTAGTCTTTTTT	-117085415	True	NA	NA	False	ATTAAA	-18	NA	117085576	117083553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_117083600_117085600
transcript_72607.known	chr4	-	4809	13	FSM	ENSG00000164099.3	ENST00000296498.3	4809	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.69966214673719	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCCTTAAATTTTTGT	-118352993	False	NA	0	True	AATAAA	-22	NA	118353003	118280037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_118282244_118282830_118283112_118294938_118295062_118295777_118295857_118298732_118298939_118308435_118308578_118313200_118313398_118316181_118316324_118318377_118318557_118331715_118331867_118335472_118335652_118338175_118338315_118352218
transcript_72608.known	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	46	junction_1	309.678327731643	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
transcript_72609.known	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	136	junction_1	269.148038571093	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	118267149	True	NA	18	True	AATAAA	-19	NA	118278754	118279821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
transcript_72611.known	chr4	+	485	4	FSM	ENSG00000269893.9	ENST00000602414.6	485	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	328.756242019321	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	118267149	True	NA	20	True	AATAAA	-21	NA	118278754	118279823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118278933_118279138_118279388_118279432_118279623
transcript_72614.known	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	146	junction_1	318	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	118267103	True	NA	20	True	AATAAA	-21	NA	118278708	118279823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118279388_118279432_118279623
transcript_72615.known	chr4	+	6165	3	FSM	ENSG00000269893.9	ENST00000654083.2	6166	3	1	0	1	0	multi-exon	FALSE	canonical	3	573	junction_1	104.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATGGAGAGTAATCAAG	118267103	True	NA	NA	False	AGTAAA	-38	NA	118278708	118285316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118279138_118279388_118279432_118279623
transcript_72619.known	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	573	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118279138_118279388
transcript_72621.known	chr4	+	1105	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	118267112	True	NA	19	True	AATAAA	-20	NA	118278717	118279822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278700_118279800
transcript_72624.known	chr4	+	6642	11	FSM	ENSG00000145388.15	ENST00000388822.10	6642	11	0	0	0	0	multi-exon	FALSE	canonical	2	146	junction_3	33.7355895161178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTGCTCATAATTCAT	118681892	True	NA	NA	False	AATAAA	-17	NA	118685391	118715430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_72629.known	chr4	+	6625	11	FSM	ENSG00000145388.15	ENST00000628452.2	6625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.8226658634084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTCATAATTCATGAA	118681913	True	NA	NA	False	AATAAA	-20	NA	118685412	118715433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118685601_118687922_118688012_118689369_118689469_118691541_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_72632.nic	chr4	+	2402	10	NIC	ENSG00000145388.15	novel	6642	11	NA	NA	-12	788	combination_of_known_junctions	FALSE	canonical	2	26	junction_9	69.1778884247964	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATGAATACTTTTCT	118681880	True	NA	18	True	AATGAA	-28	NA	118685379	118711389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118709997
transcript_72638.nnic	chr4	+	855	2	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-259	-185851	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAATATTTATTAAC	NA	False	NA	NA	False	AATAAA	-15	NA	118850428	118851596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_118850941_118851253
transcript_7264.known	chr1	+	2165	6	FSM	ENSG00000160679.13	ENST00000368690.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	157.105824207761	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	153633923	False	NA	16	True	NA	NA	NA	153633981	153646305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642242_153642430_153643226_153643365_153645063
transcript_72641.known	chr4	+	504	4	FSM	ENSG00000145390.12	ENST00000514305.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGACTTGGTTTTCCTT	119209649	True	NA	NA	False	AATATA	-10	NA	119212742	119220211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119220115
transcript_72644.nic	chr4	+	525	3	NIC	ENSG00000145390.12	novel	504	4	NA	NA	-57	87	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGAGTTTTTCCTTTTA	119209562	True	NA	NA	False	ATTAAA	-23	NA	119212655	119220298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_119212874_119217549_119217674_119220115
transcript_72647.known	chr4	+	5936	19	FSM	ENSG00000145390.12	ENST00000692078.1	6631	19	-77	772	49	38	multi-exon	FALSE	canonical	2	4	junction_1	18.6472286359788	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCTTGGCCAAATTTT	119209542	True	NA	6	True	TATAAA	-21	NA	119212635	119294746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119235289_119235412_119239217_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
transcript_72648.nnic	chr4	+	376	2	NNC	ENSG00000145390.12	novel	6631	19	NA	NA	52	-6075	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAGGGAACAAAACTT	119213185	True	NA	NA	False	ATTAAA	-14	NA	119213230	119214136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_119213540_119214069
transcript_72651.known	chr4	-	2671	2	FSM	ENSG00000164096.13	ENST00000504110.2	2671	2	0	0	0	0	multi-exon	FALSE	canonical	3	2479	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGTTGATTCTCTTTC	-119284346	True	NA	NA	False	AATAAA	-15	NA	119300645	119296418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_119298780_119300335
transcript_72654.nic	chr4	+	1510	13	FSM	ENSG00000245958.7	ENST00000688315.1	1528	13	18	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	47.0197210398644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTGAGAATGCATTCT	119451325	True	NA	3	True	AATAAA	-17	NA	119454813	119552025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119512350_119512465_119512812_119512971_119528739_119528790_119550378_119550444_119551887
transcript_72664.nic	chr4	+	1397	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-24	65	-1	-55	multi-exon	TRUE	canonical	3	69	junction_7	23.5607592195158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAGAATTTTCAACAG	119451272	True	NA	3	True	ATTAAA	-15	NA	119454760	119499919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_72665.nic	chr4	+	1452	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-24	10	-1	0	multi-exon	FALSE	canonical	3	69	junction_7	23.5607592195158	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	119451272	True	NA	58	True	AATAAA	-22	NA	119454760	119499974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_72667.nnic	chr4	+	1916	7	FSM	ENSG00000245958.7	ENST00000693497.1	1873	7	-43	0	1	0	multi-exon	FALSE	canonical	1	1	junction_2	56.0386771197655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTAGTTAACTGCTTTGT	119451322	True	NA	11	True	AATAAA	-22	NA	119454810	119480935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119455134_119457970_119458078_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119479825
transcript_72669.nnic	chr4	+	1806	6	FSM	ENSG00000245958.7	ENST00000693650.1	1806	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	43.6467639121161	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTAGTTAACTGCTTTGT	119451325	True	NA	11	True	AATAAA	-22	NA	119454813	119480935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119479825
transcript_7267.known	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	175.693369254505	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	153620321	True	NA	17	True	NA	NA	NA	153634065	153646306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
transcript_72676.known	chr4	-	5227	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	0	0	0	0	multi-exon	FALSE	canonical	3	1253	junction_1	75.2944221041639	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGAAATGGAAACTGTC	-120048995	True	NA	-12	True	GATAAA	-17	NA	120066848	120055622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
transcript_72683.known	chr4	-	1277	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	615.061153237808	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTCTTAAAACATTT	-120048980	True	NA	-22	True	AATAAA	-15	NA	120066833	120059436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
transcript_72684.known	chr4	-	764	3	FSM	ENSG00000164109.14	ENST00000504707.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTGCTATAAAGCTAG	-120049005	True	NA	NA	False	NA	NA	NA	120066858	120059827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120060291_120060873_120060978_120066661
transcript_72685.known	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	17.4700910596554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-120922839	False	NA	-48	True	TATAAA	-36	NA	120922858	120694822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_72688.known	chr4	-	1249	6	FSM	ENSG00000138738.11	ENST00000512845.5	1249	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	20.1930681175496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCAACTTGTGAAAAT	-120921512	True	NA	NA	False	NA	NA	NA	120922695	120816062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_72689.nic	chr4	-	2122	5	ISM	ENSG00000138738.11	ENST00000512845.5	1249	6	-178	1083	-3	1025	5prime_fragment	FALSE	canonical	3	60	junction_2	17.6422787643774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTTAGCTTTTATTGC	-120922854	False	NA	NA	False	AATAAA	-17	NA	120922873	120817145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_72691.known	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4264860903284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	-120922851	False	218	NA	False	NA	NA	NA	120922870	120837344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
transcript_72693.nnic	chr4	-	631	3	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	-3	4298	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	46	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTGATTTGTGTTT	-120922854	False	NA	NA	False	AATAAA	-30	NA	120922873	120881206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_120881396_120907473_120907558_120922515
transcript_72696.known	chr4	-	2339	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.57681974534503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGCTAGATTGAAT	-121380935	True	NA	NA	False	NA	NA	NA	121381018	121328641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
transcript_72697.known	chr4	-	1215	6	FSM	ENSG00000186867.11	ENST00000334383.9	1215	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.93907194296653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAACAATATCTTCATAA	-121380596	False	NA	NA	False	NA	NA	NA	121380679	121329313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121329715_121330425_121330524_121332933_121333057_121336806_121336869_121340451_121340611_121380307
transcript_72707.known	chr4	-	1606	13	FSM	ENSG00000164111.15	ENST00000506395.5	1606	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	718.056302922457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAATAAACATTTCTG	-121671522	True	NA	-39	True	ACTAAA	-41	NA	121696966	121668026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678351_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_72709.known	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_4	170.52881395497	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-121671536	True	NA	42	True	ATTAAA	-17	NA	121696980	121667945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_7274.known	chr1	+	1923	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	315.642598519275	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	153620335	True	NA	13	True	NA	NA	NA	153634079	153646302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
transcript_72744.known	chr4	+	1529	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	187.800037717426	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	121795973	True	NA	14	True	ATTAAA	-17	NA	121801319	121816909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
transcript_72750.known	chr4	+	1587	12	FSM	ENSG00000123737.13	ENST00000243498.10	1587	12	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_10	60.5629240426438	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	121795976	True	NA	13	True	AATAAA	-13	NA	121801322	121817021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816368_121816448_121816771
transcript_72765.known	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_6	56.4113897892897	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	-121807770	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_72773.known	chr4	-	3840	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	63.2667535026528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACACATAAGAAAACGGAG	-121867272	True	NA	NA	False	NA	NA	NA	121870474	121824328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_72775.known	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	63.8638798986512	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	-121867248	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_72783.known	chr4	-	725	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.4412301024373	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGACAACTTGGTTC	-121867285	True	NA	NA	False	TTTAAA	-24	NA	121870487	121861293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
transcript_72786.known	chr4	-	1385	3	FSM	ENSG00000224786.3	ENST00000641807.2	1455	3	0	70	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAGAGAAGTTTTAAAAA	NA	False	NA	NA	False	ACTAAA	-1	NA	122732474	122729580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_122730636_122732051_122732194_122732286
transcript_72788.known	chr4	+	3238	2	FSM	ENSG00000181004.10	ENST00000314218.8	3238	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGATATGTGGTGTTA	122732267	True	NA	2	True	AATAAA	-16	NA	122732703	122744939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_122732885_122741882
transcript_72790.known	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.4165807559224	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-122921966	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
transcript_72791.known	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	20.017180121086	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-122922762	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
transcript_72794.nic	chr4	-	560	3	ISM	ENSG00000170917.14	ENST00000304430.10	1227	5	-14	19968	-14	-15019	5prime_fragment	FALSE	canonical	0	0	junction_2	49.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	-122921980	True	NA	NA	False	AATAAA	-24	NA	122922611	122912544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_122912624_122917500_122917705_122922334
transcript_72795.nic	chr4	-	525	3	ISM	ENSG00000170917.14	ENST00000339154.6	1065	5	-74	19901	-74	-15019	5prime_fragment	FALSE	canonical	3	75	junction_2	12	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	-122923007	False	NA	NA	False	AATAAA	-24	NA	122923042	122912544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_122912624_122917500_122917705_122922800
transcript_72796.nnic	chr4	+	2518	15	NNC	ENSG00000145375.9	novel	2492	15	NA	NA	0	-6888	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	9.92959912461274	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTCTGTTTCCTTTC	122919990	True	NA	NA	False	AGTAAA	-2	NA	122923100	123095405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123095269
transcript_72797.known	chr4	+	2492	15	FSM	ENSG00000145375.9	ENST00000422835.2	2492	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	8.88704629428331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	122919990	True	NA	NA	False	NA	NA	NA	122923100	123102293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123102183
transcript_72799.known	chr4	+	2267	11	FSM	ENSG00000145375.9	ENST00000674886.1	2267	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.1884824785098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAATGCAATAAATGAC	122919967	True	NA	NA	False	NA	NA	NA	122923077	122991109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_122923306_122927636_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_122990773
transcript_72800.known	chr4	+	849	2	FSM	ENSG00000164056.11	ENST00000515726.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCCTGGCCGGTGGCG	123392041	True	NA	NA	False	NA	NA	NA	123396810	123398337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123396933_123397610
transcript_72801.known	chr4	+	2348	2	FSM	ENSG00000164056.11	ENST00000339241.1	2348	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTCTCGATTTCTT	123392031	True	NA	5	True	AATATA	-11	NA	123396800	123403752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123396933_123401536
transcript_72802.known	chr4	+	2352	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	123398224	True	NA	13	True	AATATA	-19	NA	123398385	123403760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123398514_123401536
transcript_72803.known	chr4	+	2504	2	FSM	ENSG00000164056.11	ENST00000394339.2	2504	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTCGATTTCTTCAT	123399458	False	NA	8	True	AATATA	-14	NA	123399509	123403755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123399795_123401536
transcript_72804.nnic	chr4	-	1708	3	NNC	ENSG00000151458.12	novel	8798	5	NA	NA	-3	-40300	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGCTCTTCACTGAT	-124709620	True	NA	NA	False	AATAAA	-32	NA	124712735	124707658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_124707814_124709999_124711275_124712457
transcript_72806.known	chr4	-	8798	5	FSM	ENSG00000151458.12	ENST00000504087.6	8798	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	8.6421930087218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCACTTCTTCATGA	-124709617	True	NA	NA	False	AATAAA	-27	NA	124712732	124664047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_124667515_124668983_124672535_124678675_124678906_124709999_124711275_124712457
transcript_72808.known	chr4	+	13208	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	13.3908758322806	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	127630920	True	NA	11	True	AATAAA	-24	NA	127632956	127726737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_72813.nic	chr4	+	416	2	ISM	ENSG00000164066.13	ENST00000503952.5	3006	17	-30	72788	-21	-345	5prime_fragment	FALSE	canonical	3	41	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAACCCAAACTCAAGC	127630899	True	NA	-25	True	AAGAAA	-8	NA	127632935	127643691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_127633181_127643520
transcript_72815.known	chr4	+	10608	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	6.21725992601679	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACACCTGAGGTTTA	127781883	True	NA	18	True	AATAAA	-29	NA	127782321	127840733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
transcript_72821.known	chr4	+	3838	16	FSM	ENSG00000142731.11	ENST00000270861.10	3838	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	25.9909385919187	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTATATTTTAATGAA	127877200	True	NA	NA	False	AATACA	-23	NA	127880892	127899224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886729_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_72832.known	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.7583651143876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	127963959	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_72837.known	chr4	-	4422	12	FSM	ENSG00000164073.11	ENST00000641686.2	4422	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	14.9853923362411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAGCTTTAAAACTTTA	-127963113	True	NA	-11	True	AATAAA	-22	NA	127965173	127917804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_7284.known	chr1	+	1840	4	FSM	ENSG00000160679.13	ENST00000614256.4	1840	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	378.352862932064	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	153633923	False	NA	16	True	NA	NA	NA	153633981	153646305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153645063
transcript_72841.known	chr4	-	4374	12	FSM	ENSG00000164073.11	ENST00000641178.1	4374	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	22.7607026863597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAGACTTATTTGTAA	NA	False	NA	-95	True	AATAGA	-42	NA	127966034	127917888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965896
transcript_72843.known	chr4	-	4448	11	FSM	ENSG00000164073.11	ENST00000641186.1	4448	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	25.0081986556409	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTACCTTAAGCTTT	-127965205	False	NA	-20	True	AATAAA	-13	NA	127965322	127917813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72846.known	chr4	-	4860	10	FSM	ENSG00000164073.11	ENST00000641482.1	4860	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	21.2399576852012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAAGAAATTCT	-127963088	True	NA	NA	False	GATAAA	-35	NA	127965148	127917924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72847.known	chr4	-	2479	9	FSM	ENSG00000164073.11	ENST00000641590.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	31.2919718138694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACCTACTTTTTATTTA	-127963085	True	NA	NA	False	TTTAAA	-32	NA	127965145	127920188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72849.known	chr4	-	4050	9	FSM	ENSG00000164073.11	ENST00000641509.1	4050	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	27.3058487324602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGAATGTT	-127963111	True	NA	-66	True	NA	NA	NA	127965171	127917859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72851.known	chr4	-	948	8	FSM	ENSG00000164073.11	ENST00000641743.1	948	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	8.04325043443386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATATAGATGTTATTGA	-127963088	True	NA	NA	False	NA	NA	NA	127965148	127932914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72852.nnic	chr4	+	1707	7	NNC	ENSG00000164074.16	novel	2177	11	NA	NA	-29	1580	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_6	24.0791518861349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAAATAGGAT	127965291	False	NA	NA	False	AAAAAG	-27	NA	127965347	128010537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128009548
transcript_72853.nnic	chr4	+	2184	7	NNC	ENSG00000164074.16	novel	5753	13	NA	NA	0	2115	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_6	24.0791518861349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGAGTGTACAACCCTG	127963959	True	NA	NA	False	AATAAA	-26	NA	127965405	128011072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128009548
transcript_72854.known	chr4	-	1422	7	FSM	ENSG00000164073.11	ENST00000641243.1	1422	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	23.4426012966897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTTGACAACTTGGT	-127963111	True	NA	NA	False	ATTAAA	-21	NA	127965171	127932318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72855.nic	chr4	-	895	7	ISM	ENSG00000164073.11	ENST00000641743.1	948	8	-70	5812	-1	353	5prime_fragment	FALSE	canonical	3	71	junction_2	8.51958527942137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTGTTTGGTATTTA	-127963158	True	NA	1	True	AATATA	-25	NA	127965218	127938726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72860.known	chr4	-	886	4	FSM	ENSG00000164073.11	ENST00000641140.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	7.58653778449403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	-127963159	True	NA	NA	False	NA	NA	NA	127965219	127943390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965071
transcript_72862.nic	chr4	+	537	3	ISM	ENSG00000164074.16	ENST00000611882.1	1493	11	-136	46276	-7	-24428	5prime_fragment	FALSE	canonical	3	66	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	127965226	True	NA	6	True	AATAAA	-14	NA	127965369	127984529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_127965607_127982938_127983048_127984338
transcript_72863.known	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	43.1405544472545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	128058985	True	NA	18	True	ATTAAA	-22	NA	128061285	128123869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
transcript_72866.nic	chr4	+	3437	11	ISM	ENSG00000138709.19	ENST00000512292.5	3105	12	3	-42	3	42	intron_retention	FALSE	canonical	3	45	junction_9	37.1840019363166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTATATAACTTTA	128058988	True	NA	4	True	ATTAAA	-17	NA	128061288	128123911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825
transcript_72867.nnic	chr4	+	2240	10	NNC	ENSG00000138709.19	novel	1593	8	NA	NA	-216	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	38.627694280556	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128061052	True	NA	12	True	AATAAA	-19	NA	128061069	128108901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_128061226_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_72869.known	chr4	+	2151	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	19.9654021735255	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059034	True	NA	12	True	AATAAA	-19	NA	128061334	128108901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_72875.known	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	21.1601039694988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059047	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
transcript_72879.nic	chr4	+	2063	9	NIC	ENSG00000138709.19	novel	2151	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	44.2033652565051	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128058981	True	NA	12	True	AATAAA	-19	NA	128061281	128108901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_72882.nic	chr4	+	286	4	ISM	ENSG00000138709.19	ENST00000394288.7	2151	10	-46	31060	3	-31013	5prime_fragment	FALSE	canonical	3	81	junction_1	17.326921891156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	128058988	True	NA	NA	False	AATAAA	-25	NA	128061288	128077841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787
transcript_72883.known	chr4	-	3785	3	FSM	ENSG00000164040.18	ENST00000520121.6	3785	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	37	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTGAATGTTTCTCA	NA	False	NA	-4	True	AATAAA	-26	NA	128288829	128269241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_128271414_128272361_128272518_128287372
transcript_72886.nnic	chr4	-	724	2	NNC	ENSG00000164040.18	novel	2858	2	NA	NA	-5347	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTGAGTTGGACTTTA	-128278024	False	NA	-19	True	AATAAA	-21	NA	128278408	128270139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_128270850_128278394
transcript_72887.known	chr4	-	2987	21	FSM	ENSG00000151466.12	ENST00000281142.10	2987	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	12.8631255921724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGTCATGTATTTTA	-129091021	True	NA	2	True	AATAAA	-18	NA	129093539	128883992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_128884540_128888678_128888775_128891058_128891138_128936654_128936852_128942995_128943189_128946006_128946153_128948495_128948571_128952768_128952841_128957025_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_72891.known	chr4	-	2096	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	23.0008695487801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTTTTTCTCATTT	-129090859	False	NA	NA	False	AATAAA	-18	NA	129093377	129036594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_72894.known	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.951774464536	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	-129091027	True	NA	NA	False	AATAAA	-25	NA	129093545	129039192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_72896.known	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	154.941408280679	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	128808281	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_72899.known	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	209.022090638765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	128808337	True	NA	11	True	AATAAA	-19	NA	128811325	128864630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_72903.known	chr4	+	6170	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	17.4424768883321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATTAGTTTTT	129093306	False	NA	NA	False	AATAAA	-22	NA	129093316	129116640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_72904.known	chr4	+	5513	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	10.3266645147405	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	129095590	True	NA	NA	False	AATAAA	-19	NA	129096151	129116637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_7291.known	chr1	-	547	3	FSM	ENSG00000189171.15	ENST00000392622.3	547	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	201	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	-153626587	False	NA	-24	True	AATAAA	-17	NA	153627048	153618803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153619039_153626319_153626534_153626950
transcript_72917.known	chr4	-	2515	8	FSM	ENSG00000250241.7	ENST00000660426.1	2515	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4.36591622569604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTACTAAATATAAGTGAGA	-133148646	True	NA	NA	False	AATAAA	-3	NA	133149124	133094033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133147198_133147277_133149028
transcript_72919.known	chr4	-	1205	8	FSM	ENSG00000250241.7	ENST00000659189.1	1205	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.33777898591114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACAAAGAGGCCAAAAC	-133148616	True	NA	NA	False	NA	NA	NA	133149094	133110267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_133110911_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_7292.known	chr1	-	579	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	191.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	-153626807	False	NA	-24	True	AATAAA	-17	NA	153627268	153618803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153619039_153626319_153626534_153627138
transcript_72921.known	chr4	+	8510	5	FSM	ENSG00000138650.9	ENST00000264360.7	8510	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.89711431702997	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGCTGATTTAGTAAT	133148450	True	NA	97	True	AATAAA	-36	NA	133149293	133194700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_72923.known	chr4	-	1460	2	FSM	ENSG00000286467.1	ENST00000669848.1	1460	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGATCTTTGTGTAA	-133263091	True	NA	NA	False	TATAAA	-12	NA	133263115	133261021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_133261995_133262628
transcript_72927.known	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	48.3482735529983	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-137529442	True	NA	-22	True	AATAAA	-18	NA	137532459	137519702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
transcript_72928.known	chr4	-	9645	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	5.03377025451168	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCGTCATGTTTTGC	-138240046	True	NA	NA	False	AATAAA	-20	NA	138242349	138164096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_72930.known	chr4	-	1965	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	39.9819403675654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACTACGATATCAAG	-139083748	True	NA	NA	False	AAAAAG	-18	NA	139084325	139058718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
transcript_72931.known	chr4	-	3036	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	41.1315639813946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	-139084478	False	NA	-10	True	AATATA	-21	NA	139084496	139057854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
transcript_72937.known	chr4	-	4012	10	FSM	ENSG00000109381.21	ENST00000394235.6	4012	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	29.7993288515027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAATTCTGTCTCCTTT	-139175099	True	NA	49	True	AAGAAA	-35	NA	139177218	139057219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
transcript_72940.nic	chr4	-	527	3	ISM	ENSG00000109381.21	ENST00000514606.1	2219	4	-70	5857	-70	-5857	5prime_fragment	FALSE	canonical	3	56	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	-139084186	True	NA	NA	False	AAAAAG	-7	NA	139084408	139071866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_139072004_139073453_139073568_139084132
transcript_72942.known	chr4	-	1434	3	FSM	ENSG00000109381.21	ENST00000511006.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTGAACCCGAGAGGC	-139175099	True	NA	NA	False	NA	NA	NA	139177218	139136770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139137868_139139412_139139498_139176966
transcript_72943.known	chr4	+	6072	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	81.1238921192529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTGGAAAAGATTAC	139295351	True	NA	-8	True	AATAAA	-1	NA	139301587	139391368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
transcript_72945.nic	chr4	+	2180	15	ISM	ENSG00000164134.13	ENST00000296543.10	6174	20	-80	21100	-80	-9051	5prime_fragment	FALSE	canonical	3	334	junction_8	24.2176567396432	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAAAAAATGCAGA	139301366	True	NA	20	True	AATAAA	-34	NA	139301424	139370284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210
transcript_72949.known	chr4	-	761	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	2047.57772990429	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139302535	False	NA	-11	True	AATAAA	-40	NA	139302551	139289916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
transcript_7295.known	chr1	-	477	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	0	0	0	multi-exon	TRUE	canonical	3	268	junction_2	67	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	-153619330	True	NA	-19	True	AATAAA	-22	NA	153627505	153618798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153619039_153626319_153626534_153627482
transcript_72950.known	chr4	-	1257	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2046.3555311822	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139301194	False	NA	-11	True	AATAAA	-40	NA	139301210	139289916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
transcript_72951.known	chr4	-	696	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	2044.88640271287	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGTGACAACTTGTA	-139301468	True	NA	-25	True	AATAAA	-36	NA	139302477	139289930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
transcript_72953.known	chr4	-	1198	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	1780.41573445642	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139301194	False	NA	-11	True	AATAAA	-40	NA	139301210	139289916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
transcript_72954.known	chr4	-	809	5	FSM	ENSG00000109390.13	ENST00000505036.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1811.10063221236	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAGCATATTGTGACA	-139301188	False	NA	-32	True	AATAAA	-29	NA	139301204	139289937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300963
transcript_72955.known	chr4	-	664	5	FSM	ENSG00000109390.13	ENST00000394225.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	1766.58659213184	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-139301517	True	NA	-47	True	AATAAA	-14	NA	139302526	139289952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_72958.known	chr4	-	1224	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.34209919681348	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTCTACTTTTTTC	-139279890	True	NA	-11	True	AATAAA	-13	NA	139280225	139266164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
transcript_72964.nnic	chr4	-	1402	2	NIC	ENSG00000273247.6	novel	2510	3	NA	NA	24	853	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGGGCAAAAGATCCAAA	-139453692	True	NA	NA	False	NA	NA	NA	139454010	139412948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_139414025_139453684
transcript_72965.nnic	chr4	-	560	2	NIC	ENSG00000273247.6	novel	627	3	NA	NA	24	11	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGGCACATAGACCACCA	-139453692	True	NA	NA	False	ATTAAA	-12	NA	139454010	139413790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_139414025_139453684
transcript_72966.known	chr4	-	6808	8	FSM	ENSG00000145391.14	ENST00000274031.8	6808	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	4.76380914300945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCATTGTCTTCCTTTG	-139555712	True	NA	-2	True	ATTAAA	-16	NA	139556219	139506037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139511844_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_72968.known	chr4	-	1590	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	139556769	139532578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139533367_139546919_139547050_139556097
transcript_72971.known	chr4	+	740	5	FSM	ENSG00000085871.9	ENST00000265498.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	5.76085931090146	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	139665175	True	NA	19	True	AATAAA	-21	NA	139665818	139704243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_139666078_139678542_139678643_139695196_139695268_139703454_139703537_139704015
transcript_72972.known	chr4	+	634	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63.0396700498979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	139665191	True	NA	0	True	AATAAA	-2	NA	139665834	139704224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
transcript_72974.known	chr4	+	4995	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_3	15.06283137026	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGGTGATTGTCAT	140370431	True	NA	NA	False	AATAAA	-20	NA	140373645	140385728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
transcript_72975.known	chr4	+	1838	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	292.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	140370321	True	NA	20	True	AATAAA	-8	NA	140373535	140382545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140373718_140379120_140379193_140380961
transcript_72976.known	chr4	-	453	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	25	0	3	0	multi-exon	FALSE	canonical	3	29	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCCGTACTTTCTCTG	-140373236	True	NA	NA	False	AATAAA	-14	NA	140373381	140360681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_140360975_140369309_140369351_140373262
transcript_72977.known	chr4	-	2725	15	FSM	ENSG00000153132.13	ENST00000325617.10	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	5.96246764420263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTATTTGACAGGTTAT	-140427382	True	NA	-1	True	AATAAA	-25	NA	140427648	140388452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_72981.nic	chr4	-	1708	13	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-24	3854	-11	-3852	5prime_fragment	FALSE	canonical	3	16	junction_5	6.26941429126801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGGAAGAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	140427672	140392306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_72983.nic	chr4	-	649	5	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-24	17404	-11	-5345	5prime_fragment	FALSE	canonical	3	29	junction_1	4.69041575982343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAATCTAGATCTTCC	NA	False	NA	NA	False	AATATA	-21	NA	140427672	140405856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_72984.known	chr4	+	4399	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_1	25.3660698571931	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	140520857	True	NA	12	True	AATAAA	-18	NA	140524167	140553770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
transcript_72989.known	chr4	+	751	3	FSM	ENSG00000179387.10	ENST00000511887.6	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTTTCTTGCTCATA	140520857	True	NA	NA	False	AATAAA	-21	NA	140524167	140527952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140524281_140525419_140525571_140527465
transcript_72990.known	chr4	-	1621	6	FSM	ENSG00000109424.4	ENST00000262999.4	1621	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTTGAGATCTAT	-140568908	True	NA	NA	False	AATAAA	-22	NA	140568961	140559430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_140560011_140562192_140562374_140563109_140563212_140563317_140563519_140567778_140567978_140568603
transcript_72994.nic	chr4	+	1660	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	-6	-214	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	82.8494097224478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATGATAAGTATGTT	141216940	True	NA	9	True	ATTAAA	-18	NA	141220880	141234483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_141221078_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_72997.nic	chr4	+	1593	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	0	-214	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	83.75286986054	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATGATAAGTATGTT	141216946	True	NA	9	True	ATTAAA	-18	NA	141220886	141234483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_141221017_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_73003.known	chr4	+	1891	10	FSM	ENSG00000109445.11	ENST00000262990.9	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_8	23.8394837958862	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	141216954	True	NA	19	True	AATAAA	-19	NA	141220894	141234697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_73006.known	chr4	+	7684	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_1	162.28607847422	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCATGTGATTATTT	143504196	True	NA	9	True	ATTAAA	-16	NA	143513701	143557486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
transcript_73008.known	chr4	+	1989	1	FSM	ENSG00000236296.8	ENST00000510805.1	1989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACCTCAGCCTTCATGG	143559134	True	NA	NA	False	AATAAA	-10	NA	143559471	143561460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_143559500_143561500
transcript_73009.known	chr4	+	1770	4	FSM	ENSG00000164161.10	ENST00000434550.2	1770	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCTTGTACAATGTTT	144646155	True	NA	NA	False	CATAAA	-19	NA	144646171	144660273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636
transcript_73011.known	chr4	-	689	7	FSM	ENSG00000164162.14	ENST00000513054.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	109.388705490507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACCAGTAGAAGAGAGC	-145094342	True	NA	NA	False	ATTAAA	-5	NA	145098180	144995455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097494_145097563_145097687_145097761_145098119
transcript_73012.known	chr4	-	963	7	FSM	ENSG00000164162.14	ENST00000510270.5	963	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	110.975472765632	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTGAAGCCAATC	-145094351	True	NA	-30	True	AATAAA	-24	NA	145098189	144995160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_73013.nnic	chr4	-	1229	6	NNC	ENSG00000164162.14	novel	928	6	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	105.323501650866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094395	False	NA	-27	True	AATAAA	-27	NA	145098233	144995157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_144995604_145033041_145033372_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_73016.known	chr4	-	928	6	FSM	ENSG00000164162.14	ENST00000451299.6	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.210622193997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094351	True	NA	-27	True	AATAAA	-27	NA	145098189	144995157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_73024.known	chr4	-	1444	5	FSM	ENSG00000164162.14	ENST00000507656.6	1444	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	41.1665823211012	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGAAATGTGGTTTTT	-145094358	True	NA	NA	False	ATTAAA	-15	NA	145098196	144994575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_73025.known	chr4	-	868	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	79.8040569144201	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094375	True	NA	-27	True	AATAAA	-27	NA	145098213	144995157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_73029.known	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	106.867519231367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	-145094353	True	NA	-65	True	AATAAA	-31	NA	145098191	144995195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
transcript_73032.nic	chr4	-	740	4	NIC	ENSG00000164162.14	novel	687	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	94.8085790773528	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	-145094395	False	NA	-65	True	AATAAA	-31	NA	145098233	144995195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_144995604_145081659_145081751_145095984_145096112_145098119
transcript_73036.known	chr4	+	3887	18	FSM	ENSG00000164163.11	ENST00000296577.9	3887	18	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_12	63.0622804144654	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	145090653	True	NA	NA	False	AATAAA	-20	NA	145098310	145129524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
transcript_73047.nic	chr4	+	1234	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-45	7511	-22	2647	5prime_fragment	FALSE	canonical	3	691	junction_4	63.7872244262125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAAGAAAAAAATGGG	145090608	True	NA	NA	False	TATAAA	-7	NA	145098265	145120062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_73048.known	chr4	-	1468	5	FSM	ENSG00000272727.2	ENST00000664112.1	1468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTATATTTTTATGTA	-145340425	True	NA	NA	False	AATAAA	-16	NA	145340467	145335264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_145336120_145336204_145336289_145337200_145337314_145338775_145339085_145340360
transcript_73049.known	chr4	-	1300	5	FSM	ENSG00000272727.2	ENST00000660722.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATATTTTTATGTACT	-145340444	True	NA	NA	False	AATAAA	-18	NA	145340486	145335262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_145336120_145336204_145336289_145337200_145337314_145338964_145339085_145340360
transcript_73050.nnic	chr4	+	1814	7	NNC	ENSG00000170365.10	novel	3293	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	28.7368327335417	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145481472	True	NA	NA	False	TTTAAA	-2	NA	145481649	145558079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_145481745_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73051.nic	chr4	+	1806	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	28.7368327335417	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145481488	False	NA	NA	False	TTTAAA	-2	NA	145481665	145558079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_145481753_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73052.nic	chr4	+	1900	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	34.9829323464394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145482509	False	NA	NA	False	TTTAAA	-2	NA	145482526	145558079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_145482708_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73053.nic	chr4	+	1803	7	NIC	ENSG00000170365.10	novel	2085	7	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	33.579507639829	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145482719	False	NA	NA	False	TTTAAA	-2	NA	145482736	145558079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_145482821_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73054.known	chr4	+	1658	7	FSM	ENSG00000170365.10	ENST00000394092.6	1658	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34.6313923100607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAACTATTGAGCCTT	145482642	True	NA	NA	False	NA	NA	NA	145482804	145557954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145482869_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73057.known	chr4	+	5944	7	FSM	ENSG00000151611.17	ENST00000649156.2	5944	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.17272527054467	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGGGATCATGTAGT	145619076	True	NA	9	True	GATAAA	-18	NA	145619384	145660033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_73067.known	chr4	+	549	5	FSM	ENSG00000164167.12	ENST00000504181.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	610.238221926487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAATTGGAAAGCCAA	146159597	True	NA	NA	False	AATAAA	-1	NA	146175747	146190187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621_146189782_146190080
transcript_7307.known	chr1	-	1852	14	FSM	ENSG00000143621.17	ENST00000361891.9	1852	14	0	0	0	0	multi-exon	FALSE	canonical	3	3412	junction_13	199.502398733929	6243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-153616573	True	NA	0	True	AATAAA	-19	NA	153670993	153661787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668558_153669835_153669879_153670170_153670231_153670917
transcript_73071.known	chr4	+	454	4	FSM	ENSG00000164167.12	ENST00000649747.1	454	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	698.307636758725	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTGACATGTGAGT	146159577	True	NA	-38	True	NA	NA	NA	146175727	146189767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_146175812_146182905_146183016_146187273_146187388_146189621
transcript_73073.known	chr4	-	1134	13	FSM	ENSG00000120519.16	ENST00000507030.5	1134	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.31507290636732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGAGGTGGACTTTCTG	-146521372	False	NA	NA	False	NA	NA	NA	146521717	146256490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146256521_146256825_146256937_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_73077.known	chr4	-	1638	3	FSM	ENSG00000120519.16	ENST00000502607.1	1638	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACTTTTTGATTATTCA	-146521577	True	NA	NA	False	AATAAA	-17	NA	146521922	146513901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146515152_146517037_146517121_146521617
transcript_73078.known	chr4	-	2178	13	FSM	ENSG00000137473.19	ENST00000325106.9	2178	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.986013297183269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTAAGTCCTTCAAT	-146945845	True	NA	NA	False	AATAAA	-24	NA	146945864	146706616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146707189_146707484_146707552_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_73079.known	chr4	-	1777	13	FSM	ENSG00000137473.19	ENST00000504425.5	1777	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATTTTGCATTTCAGT	-146945863	True	NA	NA	False	AATAAA	-20	NA	146945882	146707032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146707189_146707484_146707549_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_73081.known	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	17.1218288974452	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-147682331	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
transcript_73083.known	chr4	+	4164	10	FSM	ENSG00000164168.8	ENST00000296582.8	4164	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_7	34.5857317329874	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAGGGTTAGTATCC	147610896	True	NA	NA	False	AGTAAA	-22	NA	147617396	147636721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632902_147633003_147633764_147633937_147634168
transcript_73089.known	chr4	+	1559	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	7.63216876123687	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTGTGTGTATGGT	147731257	True	NA	NA	False	TTTAAA	-19	NA	147732062	147858488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
transcript_7309.known	chr1	-	1906	14	FSM	ENSG00000143621.17	ENST00000615950.4	1906	14	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_11	1032.19009418447	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-153616608	True	NA	0	True	AATAAA	-19	NA	153671028	153661787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668577_153669835_153669879_153670170_153670231_153670917
transcript_73090.nic	chr4	-	1567	9	ISM	ENSG00000198589.14	ENST00000507224.5	8826	51	-10	599371	-3	-73554	5prime_fragment	FALSE	canonical	3	76	junction_8	14.4173289828595	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	-151009339	True	NA	NA	False	NA	NA	NA	151015287	150914093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_73094.known	chr4	+	862	6	FSM	ENSG00000145425.10	ENST00000506126.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7631.28370328348	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATTTGTGATGGTTT	151081797	True	NA	-1	True	AATAAA	-2	NA	151099673	151104623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099715_151100426_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_73095.known	chr4	+	985	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	7629.28904682474	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081752	True	NA	13	True	AATAAA	-16	NA	151099628	151104637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_73098.known	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9067.32913021004	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081747	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
transcript_73099.known	chr4	+	671	6	FSM	ENSG00000145425.10	ENST00000515792.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7820.27014878642	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081794	True	NA	13	True	AATAAA	-16	NA	151099670	151104637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099715_151100484_151100589_151100974_151101013_151102870_151103080_151104176_151104287_151104471
transcript_73100.known	chr4	+	674	6	FSM	ENSG00000145425.10	ENST00000507327.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7631.28370328348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTGAAGGCAGTAGTT	151081792	True	NA	NA	False	NA	NA	NA	151099668	151104490	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099713_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_73102.known	chr4	-	1860	13	FSM	ENSG00000059691.12	ENST00000503160.5	1860	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	45.9546878276127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACTGTTACCCATT	-151759056	True	NA	NA	False	AATAAA	-9	NA	151760930	151670862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717002_151719424_151719539_151758771_151758923_151760806
transcript_73103.known	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	17.4872969768216	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-151759133	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_73104.nnic	chr4	-	1909	12	NIC	ENSG00000059691.12	novel	2369	13	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_1	42.6475077508097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTCTAAGAAAACTTTT	-151759153	True	NA	NA	False	AATAAA	-23	NA	151761027	151670848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_151671303_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_73107.known	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	18.1737644500449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	-151759111	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_73108.known	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	91	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	-151759116	True	NA	NA	False	ATTAAA	-24	NA	151760990	151721945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151722216_151758771_151758923_151760806
transcript_73109.nic	chr4	-	1668	2	ISM	ENSG00000059691.12	ENST00000508611.1	605	3	-37	35530	-20	-35530	5prime_fragment	FALSE	canonical	3	187	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTGGAAGCTGG	-151759153	True	NA	NA	False	NA	NA	NA	151761027	151757475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_151758923_151760806
transcript_73111.known	chr4	+	3000	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTATATATGAGTCCCA	152535883	True	NA	38	True	AATAAA	-39	NA	152536263	152539263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152536300_152539300
transcript_73112.known	chr4	-	2438	2	FSM	ENSG00000169989.3	ENST00000304337.3	2438	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	-152779711	True	NA	NA	False	CATAAA	-18	NA	152779730	152769353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_152771543_152779481
transcript_73114.nnic	chr4	-	719	2	NNC	ENSG00000169989.3	novel	2438	2	NA	NA	-189	-5970	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTGAGTTTGTGGTAAT	-152779907	False	12	-4	True	AATAAA	-16	NA	152779919	152775323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_152775605_152779481
transcript_73116.known	chr4	+	3424	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	77.3336925279014	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152779926	False	NA	NA	False	AATAAA	-21	NA	152779936	152912357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73118.known	chr4	+	3542	9	FSM	ENSG00000164144.16	ENST00000353617.7	3542	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	62.1726426975724	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152773944	True	NA	NA	False	AATAAA	-21	NA	152779953	152912357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73120.known	chr4	+	1601	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	80.1623352953243	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAAACTATTT	152773961	True	NA	NA	False	ATTAAA	-30	NA	152779970	152910664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73121.known	chr4	+	1302	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	61.5901529367764	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGTTGTTATATTTCTA	152773975	True	NA	NA	False	AATAAA	-7	NA	152779984	152910244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73127.known	chr4	+	531	4	FSM	ENSG00000164144.16	ENST00000509413.1	531	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAGTAGTTCCTAAAT	152780079	False	NA	NA	False	AATAAA	-15	NA	152780108	152810386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780227_152807203_152807249_152809672_152809734_152810079
transcript_73129.known	chr4	+	514	4	FSM	ENSG00000164144.16	ENST00000510831.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTAGTTCCTAAATAT	152773983	True	NA	NA	False	AATAAA	-17	NA	152779992	152810388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780092_152807203_152807249_152809672_152809734_152810079
transcript_73130.known	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	1	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	-152936652	True	NA	2	True	AATAAA	-16	NA	152936761	152934515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_152935451_152936648
transcript_73131.known	chr4	+	679	3	FSM	ENSG00000109654.16	ENST00000632856.2	679	3	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	32.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153202109	True	NA	4	True	ATTAAA	-17	NA	153204442	153276268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153204561_153270334_153270520_153275892
transcript_73133.known	chr4	+	766	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	55.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153256528	False	NA	4	True	ATTAAA	-17	NA	153257402	153276268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153257608_153270334_153270520_153275892
transcript_73135.nnic	chr4	+	1322	8	NIC	ENSG00000121211.8	novel	638	6	NA	NA	230	110	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	139.777228007239	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	153337372	False	NA	-8	True	NA	NA	NA	153344917	153414975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_153345507_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_73136.nnic	chr4	+	740	7	NIC	ENSG00000121211.8	novel	929	8	NA	NA	1	110	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	154.844725092232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	153337143	True	NA	-8	True	NA	NA	NA	153344688	153414975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153414750
transcript_73142.known	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	21.6578213237111	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	153337142	True	NA	31	True	AATAAA	-42	NA	153344687	153415118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_73145.known	chr4	+	830	7	FSM	ENSG00000121211.8	ENST00000622785.4	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	147.197901555091	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAGATTTACAAATGAT	153337103	True	NA	8	True	AATAAA	-19	NA	153344648	153415095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153408970_153409016_153414750
transcript_73153.nnic	chr4	+	682	6	NIC	ENSG00000121211.8	novel	830	7	NA	NA	-26	-99	combination_of_known_splicesites	TRUE	canonical	3	17	junction_4	157.902501563465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCTTCACCCCTTTTG	153337077	True	NA	13	True	AATAAA	-13	NA	153344622	153414996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153408970_153409016_153414750
transcript_73162.known	chr4	-	1996	3	FSM	ENSG00000145423.5	ENST00000274063.5	1996	3	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_2	37	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTTCTGTCTTGT	-153736731	True	NA	-3	True	TATAAA	-22	NA	153789083	153780590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_153781756_153785863_153785945_153788333
transcript_73169.known	chr4	-	3317	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	0	0	0	multi-exon	TRUE	canonical	3	403	junction_9	45.6949177721558	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	-154541355	True	NA	-7	True	AATAAA	-16	NA	154550400	154535004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
transcript_73173.known	chr4	-	1673	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	124.890584766288	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGATATCCAGTCATTT	-154541352	True	NA	37	True	ATTAAA	-21	NA	154550397	154536618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
transcript_73185.known	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	209	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	154740435	True	NA	11	True	AATAAA	-18	NA	154743999	154753120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154744223_154744325_154744867_154748983
transcript_73191.known	chr4	+	1776	3	FSM	ENSG00000121207.12	ENST00000500890.6	1776	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAATGGGACT	154626741	True	NA	NA	False	AAAAAG	-17	NA	154626944	154699900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154627150_154636328_154636397_154698397
transcript_73193.known	chr4	+	5002	2	FSM	ENSG00000121207.12	ENST00000510733.1	5002	2	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTCTTTAAATTTTA	154740435	True	NA	9	True	AATAAA	-16	NA	154743999	154753118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154744867_154748983
transcript_73199.known	chr4	+	2315	6	FSM	ENSG00000151962.8	ENST00000514866.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5.84465567848098	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGCTAGTTTATACCA	154780966	True	NA	NA	False	AATGAA	-5	NA	154781212	154827385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154781437_154796741_154796904_154797810_154798279_154798781_154799565_154820362_154820423_154826767
transcript_73204.known	chr4	-	7328	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	12.7692307692308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-155376938	True	NA	-24	True	AATAAA	-20	NA	155376965	155342657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_73213.nic	chr4	-	2230	13	NIC	ENSG00000164114.19	novel	7328	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	16.6358047596141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGAGAAAAGAAAGG	-155375947	True	NA	-89	True	AAAAAG	-33	NA	155376808	155352683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376375
transcript_73221.known	chr4	+	3382	14	FSM	ENSG00000061918.14	ENST00000264424.13	3382	14	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_10	13.6581250066847	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTCATCAGCTTA	155758019	True	NA	NA	False	AATAAA	-31	NA	155759020	155807811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802341_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_73226.known	chr4	+	1700	12	FSM	ENSG00000151790.9	ENST00000536354.3	1700	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.55345522642137	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTGAAATATTGATT	NA	False	NA	NA	False	AATAAA	-22	NA	155903695	155920406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_155903794_155904017_155904124_155905066_155905158_155907721_155907793_155908886_155909015_155910024_155910212_155911496_155911605_155914322_155914435_155915854_155915913_155917394_155917475_155918148_155918240_155919836
transcript_73230.known	chr4	+	3210	13	FSM	ENSG00000164124.11	ENST00000296529.11	3210	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.62481230850387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTATTACCTCTATA	158210356	False	NA	NA	False	AGTAAA	-26	NA	158210485	158255416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158210587_158211452_158211575_158212607_158212777_158215190_158215314_158217320_158217421_158219309_158219391_158232900_158232983_158235437_158235506_158237524_158237644_158240298_158240419_158241508_158241607_158244295_158244350_158253443
transcript_73232.known	chr4	+	1633	3	FSM	ENSG00000164124.11	ENST00000509278.5	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTCTTTTTATTTTTT	158210355	False	NA	NA	False	TATAAA	-26	NA	158210484	158214016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158210587_158211452_158211575_158212607
transcript_73234.known	chr4	+	4614	14	FSM	ENSG00000171503.13	ENST00000684627.1	4614	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	20.2098458634024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGTCTATTTTAAAAAAT	158671897	True	NA	NA	False	TATAAA	-4	NA	158672275	158710718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158672491_158679289_158679678_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_73235.known	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	11.6726175299288	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	158671917	True	NA	NA	False	NA	NA	NA	158672295	158709623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_73236.known	chr4	+	1903	12	FSM	ENSG00000171503.13	ENST00000307738.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.1101009859348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTGCATATTACT	158672309	True	NA	-64	True	NA	NA	NA	158672338	158708599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158672491_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_73243.known	chr4	-	1830	10	FSM	ENSG00000171497.5	ENST00000307720.4	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_6	35.0428309358705	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCCTTCGATTCTT	-158714399	True	NA	-5	True	AATAAA	-23	NA	158723396	158709126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158709825_158710627_158710671_158710761_158710849_158713118_158713261_158715296_158715404_158715561_158715685_158717011_158717201_158719179_158719287_158721342_158721484_158723203
transcript_73258.known	chr4	+	987	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	158672287	False	NA	31	True	NA	NA	NA	158672315	158680101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158672491_158679289
transcript_73260.known	chr4	-	3366	2	FSM	ENSG00000205208.5	ENST00000379205.5	3366	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTTTGTTATAGGGA	-158668401	True	NA	0	True	AATAAA	-24	NA	158671887	158666674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158669769_158671615
transcript_73261.known	chr4	-	1103	2	FSM	ENSG00000205208.5	ENST00000508836.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTTTGTACTTG	-158672148	True	NA	NA	False	AATATA	-3	NA	158672255	158668924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158669769_158671996
transcript_73263.known	chr4	-	3358	2	FSM	ENSG00000205208.5	ENST00000508457.1	3358	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTAATCTGTCTTTTG	-158668406	True	NA	-9	True	AATAAA	-15	NA	158671892	158666683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158669765_158671615
transcript_73268.known	chr4	-	1876	8	FSM	ENSG00000145414.9	ENST00000274054.3	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	24.2705835218232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATTCATGCCTTCTC	-163163273	True	NA	-26	True	ATTAAA	-22	NA	163166890	163128668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163129349_163133153_163133257_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_73269.known	chr4	-	1159	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	60.4777277644883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACTTTTTGCTGTTCT	-163163135	False	NA	-7	True	AATAAA	-9	NA	163166752	163156963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
transcript_73273.known	chr4	-	1017	4	FSM	ENSG00000164128.7	ENST00000509586.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.8807831827438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTGCCATCCAATACG	-163331356	True	NA	49	True	AATGAA	-36	NA	163332596	163324973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163325759_163325855_163325932_163326664_163326706_163332481
transcript_73274.known	chr4	-	568	4	FSM	ENSG00000164128.7	ENST00000512819.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	40.4722126896961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTACCATCTTTAACACT	-163331356	True	NA	NA	False	NA	NA	NA	163332596	163325625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163325759_163325855_163326135_163326664_163326706_163332481
transcript_73276.known	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	4.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-163331356	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163325759_163325855_163326706_163332481
transcript_73278.nic	chr4	-	2858	2	NIC	ENSG00000164128.7	novel	2762	3	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	85	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGAGTCTCTTTCAGTT	-163331359	True	NA	-6	True	ATTAAA	-23	NA	163332599	163323965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_163326706_163332481
transcript_73279.known	chr4	+	1890	4	FSM	ENSG00000164129.12	ENST00000338566.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.0184900284226	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTACTTTTGTCCAAAA	163343371	True	NA	NA	False	AGTAAA	-17	NA	163343891	163351934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163344001_163345713_163345754_163347451_163347523_163350264
transcript_73284.known	chr4	+	1749	7	FSM	ENSG00000198498.10	ENST00000358572.10	1749	7	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	64.0999653319372	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACAGTCCTAATTTT	163483581	True	NA	16	True	AATAAA	-20	NA	163494689	163520539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_73286.known	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	325.528501909672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	163494429	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_73292.known	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	354.91937112533	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	163483558	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
transcript_73301.known	chr4	+	674	4	FSM	ENSG00000248329.6	ENST00000510062.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.8605974904589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATGAATAAAACATC	164877217	False	NA	NA	False	AATAAA	-20	NA	164877241	164898965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_164877408_164878919_164879010_164896807_164896986_164898725
transcript_73302.known	chr4	+	2432	3	FSM	ENSG00000248329.6	ENST00000507152.6	2432	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	23	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	164872429	True	NA	16	True	AATAAA	-18	NA	164877177	164897527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_164877408_164878919_164879010_164895415
transcript_73304.nnic	chr4	+	764	3	NIC	ENSG00000248329.6	novel	674	4	NA	NA	-204	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	71	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATGAATAAAACATC	164876957	False	NA	NA	False	AATAAA	-20	NA	164876973	164898965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_164877408_164878919_164879010_164898725
transcript_73307.nnic	chr4	+	685	3	NNC	ENSG00000248329.6	novel	551	2	NA	NA	-44	-91	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGACTTTTGAGAATT	164872385	True	NA	10	True	AATAAA	-18	NA	164877133	164879165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_164877408_164878107_164878273_164878919
transcript_73309.known	chr4	+	551	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACAGCTATTTGGGGG	164872445	False	NA	101	True	NA	NA	NA	164877193	164879256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_164877408_164878919
transcript_73311.known	chr4	-	2237	3	FSM	ENSG00000183439.9	ENST00000508856.2	2237	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAACATATATTACT	-164976910	True	NA	NA	False	ATTAAA	-45	NA	164977668	164968373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_164970340_164976687_164976821_164977530
transcript_73317.known	chr4	+	2175	1	FSM	ENSG00000250486.5	ENST00000648094.1	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGCATTTTCTGTTTA	164956776	True	NA	NA	False	ATTAAA	-17	NA	164956947	164959122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_164956900_164959100
transcript_73321.known	chr4	-	9953	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	1.89736659610103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAATCACTGCTAT	-165111114	True	NA	NA	False	AATAAA	-17	NA	165112860	165070607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
transcript_73329.nic	chr4	-	455	2	ISM	ENSG00000170088.14	ENST00000306480.11	9953	6	-31	32179	-31	-17201	5prime_fragment	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACGTACACTTTTACTT	-165111145	True	NA	NA	False	NA	NA	NA	165112891	165102786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_165103097_165112746
transcript_73332.known	chr4	+	2227	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	93.9191141355156	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	165307773	True	NA	15	True	AATAAA	-2	NA	165327668	165343164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_73336.known	chr4	+	1026	5	FSM	ENSG00000052802.13	ENST00000504317.1	1026	5	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	99.119876916792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAACTTAACTCATATTT	165307825	True	NA	NA	False	AATAAA	-1	NA	165327720	165340640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220
transcript_73337.known	chr4	+	1789	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	580.526216031628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	165307790	True	NA	-26	True	ATTAAA	-39	NA	165327685	165343029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_73339.known	chr4	+	973	5	FSM	ENSG00000052802.13	ENST00000507013.5	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	659.906053919799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAAACTATTGATGTCC	165307771	True	NA	NA	False	NA	NA	NA	165327666	165340351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220
transcript_73342.known	chr4	+	2582	9	FSM	ENSG00000109472.14	ENST00000402744.9	2582	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	13.256484262428	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGACACAAACTCTAA	165378996	False	NA	NA	False	TATAAA	-16	NA	165379007	165498547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165379529_165464389_165464587_165467687_165467856_165482241_165482360_165484421_165484605_165487437_165487578_165493170_165493271_165495558_165495678_165497511
transcript_73347.known	chr4	+	3829	8	FSM	ENSG00000129116.19	ENST00000507699.1	3829	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.9544511501033	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCAGTTTTGTGAAGC	NA	False	NA	-23	True	AATAAA	-15	NA	168897976	168928417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_73351.nnic	chr4	-	1155	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-19	-2408	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_2	76.1067671104219	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATGTGTGACAAATTG	-169005881	True	NA	-14	True	TATAAA	-15	NA	169010294	168989997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_73353.nic	chr4	-	1017	5	NIC	ENSG00000145439.12	novel	1052	5	NA	NA	-19	-30696	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	119.717375514167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGATTTTCTGTAAGTGT	-169005881	True	NA	-14	True	AGTAAA	-14	NA	169010294	168894488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_168894766_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_73355.known	chr4	-	3440	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	63.5314882558248	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	-169005842	True	NA	-5	True	AATAAA	-19	NA	169010255	168987589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_73357.known	chr4	-	1602	4	FSM	ENSG00000145439.12	ENST00000504480.5	1602	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	18.4571575998762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	-169005841	True	NA	NA	False	NA	NA	NA	169010254	169001168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_169002206_169006754_169006892_169007635_169007757_169009947
transcript_73358.nic	chr4	-	2404	10	ISM	ENSG00000154447.15	ENST00000284637.14	5120	12	-72	22010	-72	0	5prime_fragment	FALSE	canonical	3	44	junction_4	8.55194729106394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCATACTTACTTAC	-169270140	True	NA	3	True	NA	NA	NA	169271028	169116268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_73360.known	chr4	-	5120	12	FSM	ENSG00000154447.15	ENST00000284637.14	5120	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.50668186566515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTTGTGTCAGT	-169270068	True	NA	-1	True	ATTAAA	-19	NA	169270956	169094258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_169096688_169106846_169107206_169116268_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_73363.nic	chr4	-	1702	14	ISM	ENSG00000137601.18	ENST00000688653.1	3922	17	-6	2777	0	-2625	5prime_fragment	FALSE	canonical	3	25	junction_5	6.78232998312527	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACAAAAGGATCA	-169611329	True	NA	NA	False	AAGAAA	-26	NA	169612632	169561852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_73367.known	chr4	+	6635	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	13.9071823969567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAGTAGATCATTTAT	169617032	True	NA	NA	False	AGTAAA	-17	NA	169620577	169723673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_73370.nic	chr4	+	883	3	ISM	ENSG00000109572.15	ENST00000360642.7	3208	12	-14	40071	-11	-524	5prime_fragment	FALSE	canonical	3	110	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGTTTTTAGTAAAAA	169616969	True	NA	NA	False	NA	NA	NA	169620514	169680207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_169621064_169635912_169636089_169680049
transcript_73375.known	chr4	-	1216	8	FSM	ENSG00000056050.7	ENST00000393381.3	1216	8	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	55.0213316703214	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	-169749641	True	NA	-9	True	AATAAA	-18	NA	169757944	169729469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_73377.nnic	chr4	-	1181	7	NIC	ENSG00000056050.7	novel	1216	8	NA	NA	-64	0	combination_of_known_splicesites	TRUE	canonical	3	45	junction_4	240.745139560952	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	-169749705	True	NA	-9	True	AATAAA	-18	NA	169758008	169729469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169750535_169750726_169753675_169753836_169757829
transcript_73384.nnic	chr4	+	915	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	169939396	True	NA	7	True	AATAAA	-18	NA	169940241	169941680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_169940343_169940520_169940661_169941006
transcript_73386.nnic	chr4	+	694	3	FSM	ENSG00000289508.1	ENST00000691072.1	666	3	-34	6	-34	-6	multi-exon	FALSE	canonical	3	8	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	169939396	True	NA	5	True	AATAAA	-16	NA	169940241	169941678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_169940343_169940520_169940661_169941225
transcript_73389.nnic	chr4	+	916	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	169939431	True	NA	7	True	AATAAA	-18	NA	169940276	169941680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_169940379_169940520_169940661_169941006
transcript_73391.nnic	chr4	+	695	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	4.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	169939431	True	NA	5	True	AATAAA	-16	NA	169940276	169941678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_169940379_169940520_169940661_169941225
transcript_73397.known	chr4	-	667	3	FSM	ENSG00000198948.12	ENST00000504999.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTAGGCTTTAAAGTTG	-170025423	True	NA	NA	False	NA	NA	NA	170026339	170005583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170006011_170006602_170006737_170026233
transcript_73406.known	chr4	-	2101	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	16.9597504726536	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACCTAAAGGCATCA	-170089103	True	NA	NA	False	AATAAA	-12	NA	170090221	170060228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_73409.known	chr4	-	2250	13	FSM	ENSG00000109576.14	ENST00000337664.9	2250	13	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	14.0564338768172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	-170088838	False	NA	NA	False	AATAAA	-19	NA	170089956	170060221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_73411.nnic	chr4	-	778	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-19	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	25.7184758490856	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	-170089122	True	NA	-2	True	AATAAA	-30	NA	170090240	170075270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_73413.nnic	chr4	-	901	5	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	0	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	21.7715410570772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	-170088838	False	NA	-2	True	AATAAA	-30	NA	170089956	170075270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_73414.known	chr4	+	1316	3	FSM	ENSG00000250266.3	ENST00000667527.2	2474	3	0	1158	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226534	170283723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_170226784_170276581_170276676_170282750
transcript_73417.nic	chr4	+	4382	12	NIC	ENSG00000109586.12	novel	4249	12	NA	NA	-133	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_6	192.064297085315	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	173154968	True	NA	16	True	AATAAA	-19	NA	173168677	173323967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_73418.known	chr4	+	4249	12	FSM	ENSG00000109586.12	ENST00000265000.9	4249	12	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_6	55.201059997009	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	173155101	True	NA	16	True	AATAAA	-19	NA	173168810	173323967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_73425.known	chr4	-	2585	4	FSM	ENSG00000245213.7	ENST00000499322.7	2585	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	10.8012344973464	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAATATTTATATGTGA	-173169142	False	184	NA	False	NA	NA	NA	173169155	173143516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173145512_173166644_173166791_173167961_173168114_173168863
transcript_73430.known	chr4	-	1175	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	1089.88654799479	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-173312267	True	NA	-10	True	AATAAA	-14	NA	173334391	173331700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
transcript_73436.known	chr4	-	1032	4	FSM	ENSG00000164104.12	ENST00000438704.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	2635	junction_2	28.6395220320141	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-173333599	False	NA	-10	True	AATAAA	-14	NA	173333672	173331700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499
transcript_73437.known	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1337	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	-173312308	True	NA	-14	True	AATAAA	-10	NA	173334432	173331704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173333215_173333499_173333670_173334271
transcript_73438.known	chr4	+	1097	4	FSM	ENSG00000164105.4	ENST00000296504.4	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	25.152865973218	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCTTCAGTGTATTTA	173367759	True	NA	NA	False	AATAAA	-15	NA	173370953	173377532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_173371498_173373389_173373516_173373938_173374038_173377204
transcript_73440.nnic	chr4	-	643	3	NNC	ENSG00000272870.4	novel	1026	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	13.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	-173369529	True	NA	-40	True	AATAAA	-13	NA	173369817	173363779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_173364199_173369433_173369611_173369770
transcript_73441.known	chr4	-	1026	3	FSM	ENSG00000272870.4	ENST00000609153.2	1026	3	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	NA	False	NA	-40	True	AATAAA	-13	NA	173370721	173363779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173364199_173369433_173369611_173370291
transcript_73442.known	chr4	-	587	2	FSM	ENSG00000272870.4	ENST00000608794.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTTGTTGCTATGC	-173369527	True	NA	NA	False	NA	NA	NA	173369815	173363993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173364199_173369433
transcript_73443.known	chr4	-	1980	6	FSM	ENSG00000164117.14	ENST00000393674.7	1980	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2.24499443206436	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGCTTATATGTG	-174283031	True	NA	2	True	AATAAA	-28	NA	174283667	174236657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_174237600_174238993_174239191_174241099_174241219_174259698_174259826_174262763_174263101_174283409
transcript_73448.known	chr4	+	3824	14	FSM	ENSG00000164118.13	ENST00000396791.7	3824	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	37.1596587267212	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTATTTCTCTGTTGA	174282385	True	NA	NA	False	AATAAA	-20	NA	174283904	174332293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334_174318666_174318834_174319088_174331481
transcript_73453.known	chr4	-	2619	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3.43592135468138	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTGTATTTTT	-174522475	False	NA	NA	False	ATTAAA	-21	NA	174522488	174490174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_73457.known	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	26.3581107061944	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	176312057	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
transcript_73461.known	chr4	+	2363	10	FSM	ENSG00000109674.4	ENST00000264596.4	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.9881237299577	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGTCTATTTTTAAA	177307163	True	NA	NA	False	ATTAAA	-25	NA	177309873	177362936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379_177351550_177353307_177353729_177360502_177360678_177362288
transcript_73464.nic	chr4	+	1485	7	ISM	ENSG00000109674.4	ENST00000264596.4	2363	10	-55	11076	-55	-2419	5prime_fragment	FALSE	canonical	3	62	junction_2	14.762000767737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCAACTTTCGAGTTT	177307108	True	NA	NA	False	AATAAA	-18	NA	177309818	177351860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379
transcript_73466.known	chr4	-	2037	9	FSM	ENSG00000038002.9	ENST00000264595.7	2037	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	7.37288105152931	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	-177441614	True	NA	-4	True	AATAAA	-22	NA	177442437	177430773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_177431809_177433213_177433348_177434381_177434490_177436275_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_73468.nnic	chr4	-	1290	9	NIC	ENSG00000038002.9	novel	2037	9	NA	NA	-64	-789	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	19.1294929363013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTATATCTGAAATTGT	-177441678	True	NA	-16	True	AATAAA	-30	NA	177442501	177431562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_177431809_177433213_177433348_177434381_177434490_177436297_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_73473.known	chr4	+	2161	6	FSM	ENSG00000250131.2	ENST00000507023.1	2161	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.2927730569738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTGAAGTTAATTAATAA	177443741	True	NA	NA	False	AATAAA	-18	NA	177444978	177677126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_177445444_177451474_177451591_177593471_177593547_177596460_177596532_177623658_177623803_177675836
transcript_73480.nnic	chr4	+	974	3	NNC	ENSG00000250131.2	novel	2161	6	NA	NA	19	-135470	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	17.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTAGCCGAAAATCCTTA	177443760	True	NA	NA	False	AATAAA	-23	NA	177444997	177464735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_177445444_177451474_177451591_177464323
transcript_73482.known	chr4	-	539	3	FSM	ENSG00000250993.1	ENST00000512036.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTCGGCATGGTTG	-179465169	False	136	NA	False	TTTAAA	-18	NA	179465305	179389133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_179389502_179390029_179390090_179465194
transcript_73483.known	chr4	-	805	5	FSM	ENSG00000177822.9	ENST00000513752.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	11.5108644332213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACGCAGCCGGTCGTG	-182143857	True	NA	NA	False	NA	NA	NA	182144500	182141185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182141485_182143437_182143546_182143702_182143845_182144046_182144141_182144338
transcript_73486.known	chr4	-	1303	4	FSM	ENSG00000177822.9	ENST00000669431.1	1303	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGGCAGAGCACCCG	-182084898	True	NA	NA	False	NA	NA	NA	182085131	181979581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_181980378_182012661_182012820_182081755_182081827_182084853
transcript_73488.known	chr4	-	2260	4	FSM	ENSG00000177822.9	ENST00000315302.6	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAATACTCTAGAA	-182143823	True	NA	NA	False	NA	NA	NA	182144466	182141649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182143546_182143702_182143845_182144046_182144141_182144338
transcript_73495.known	chr4	-	794	7	FSM	ENSG00000129187.15	ENST00000510370.5	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	219.835102343148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTATCGTCTTCTAA	-182915262	True	NA	NA	False	NA	NA	NA	182917389	182891371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182917287
transcript_73502.known	chr4	-	1931	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	75.687779726981	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-182915252	True	NA	-20	True	ATTAAA	-17	NA	182917379	182890103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
transcript_73503.known	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	151.596306023597	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-182915259	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
transcript_73509.known	chr4	-	1829	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	187.58797935902	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTCTGCTCCTGTCC	-182915242	True	NA	-13	True	NA	NA	NA	182917369	182890059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
transcript_73510.known	chr4	-	879	5	FSM	ENSG00000129187.15	ENST00000507631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	201.897715440269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGTTCTTAATGGG	-182916925	False	NA	-21	True	AATAAA	-6	NA	182917396	182891013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917310
transcript_73514.known	chr4	+	2646	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	36.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	183442113	True	NA	20	True	ATTAAA	-30	NA	183444634	183448198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445070_183445534_183445635_183446087
transcript_73516.known	chr4	+	3542	3	FSM	ENSG00000168564.6	ENST00000504169.2	3542	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	26.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGGTTTGGTAATTTC	183442114	True	NA	NA	False	AATAAA	-19	NA	183444635	183449064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445070_183445534_183445666_183446087
transcript_73518.known	chr4	+	860	2	FSM	ENSG00000168564.6	ENST00000510928.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCATCACCCGTTTT	183442175	True	NA	NA	False	NA	NA	NA	183444696	183446021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445070_183445534
transcript_73519.known	chr4	+	2458	2	FSM	ENSG00000168556.7	ENST00000302327.4	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTCCTTCATTCT	183503872	True	NA	NA	False	NA	NA	NA	183505057	183512429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183505368_183510281
transcript_73520.known	chr4	+	599	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCCAAGTC	183506055	True	NA	NA	False	NA	NA	NA	183506081	183510643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183506319_183510281
transcript_73521.known	chr4	-	2590	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.4081028413316	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACACATTTTATT	-183657492	True	NA	0	True	AATAAA	-20	NA	183659178	183639635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_73527.known	chr4	-	1551	6	FSM	ENSG00000182552.15	ENST00000510968.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.2615598766448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGCTGAACTGTTA	-183657465	False	NA	NA	False	NA	NA	NA	183659151	183640459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183658928
transcript_73528.known	chr4	+	4523	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	14.9700453979011	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	183655635	True	NA	16	True	AATAAA	-16	NA	183659292	183713589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
transcript_73530.known	chr4	+	10507	4	FSM	ENSG00000173320.12	ENST00000308497.9	10507	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	183905166	True	NA	16	True	ATTAAA	-16	NA	183905306	184023526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183906957_184001324_184001478_184009157_184011424_184017088
transcript_73531.known	chr4	+	1055	3	FSM	ENSG00000173320.12	ENST00000506529.1	1055	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTCAGAGTATTGC	184010755	False	NA	NA	False	AAAACA	-6	NA	184010772	184017443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184011424_184011586_184011636_184017088
transcript_73534.known	chr4	-	2257	9	FSM	ENSG00000168310.11	ENST00000393593.8	2257	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	4.97336656601944	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	-184473620	True	NA	-15	True	AATAAA	-22	NA	184474550	184387728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184389067_184390702_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
transcript_73539.known	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	388.439263237497	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184636978	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_73542.known	chr4	-	2540	7	FSM	ENSG00000164305.19	ENST00000523916.5	2540	7	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_6	86.6206608661518	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184637040	True	NA	-2	True	AATATA	-19	NA	184649509	184627695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_73543.known	chr4	-	964	7	FSM	ENSG00000164305.19	ENST00000517513.5	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	445.428913146269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTTTTAGTTTGTAT	-184636978	True	NA	NA	False	ACTAAA	-16	NA	184649447	184629255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_73545.known	chr4	-	677	6	FSM	ENSG00000164305.19	ENST00000393588.8	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	351.159564870445	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGGCAACAGAATTTG	-184636986	True	NA	NA	False	NA	NA	NA	184649455	184629383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_73548.known	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	12.0600077521637	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	184648329	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_73555.known	chr4	+	2007	13	FSM	ENSG00000164306.11	ENST00000515774.5	2007	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16.2779673860781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCCTTATTAATTAATCAA	184648258	True	NA	16	True	ATTAAA	-30	NA	184649666	184694963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184649909_184652022_184652101_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_73557.known	chr4	-	2494	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_3	67.6282218374022	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTGGATTGTATATTA	-184723780	True	NA	-4	True	ATTAAA	-15	NA	184734096	184694084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_73567.known	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	181.578114238054	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	-184723814	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_73583.known	chr4	+	804	3	FSM	ENSG00000164306.11	ENST00000509538.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAGAAAGAAGTGTCAGC	184648347	True	NA	NA	False	NA	NA	NA	184649755	184657654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184649909_184652022_184652101_184657081
transcript_73586.nic	chr4	-	2908	15	ISM	ENSG00000151726.15	ENST00000506733.5	2646	22	31926	-1303	-2652	0	3prime_fragment	FALSE	canonical	3	40	junction_12	5.8292016466009	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTGAGGCATCTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	184776525	184755599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483
transcript_73591.known	chr4	+	4415	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	2049	junction_2	53.160135440008	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	185137380	True	NA	NA	False	AATAAA	-14	NA	185143265	185150382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
transcript_73598.known	chr4	-	4851	5	FSM	ENSG00000164323.15	ENST00000458385.7	4851	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	33.9448081449874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-185198755	True	NA	-27	True	AATAAA	-15	NA	185204000	185159664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203897
transcript_73599.known	chr4	-	2895	4	FSM	ENSG00000164323.15	ENST00000514798.1	2895	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.778037625742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTGTAAGTAGCTCAA	-185203975	False	NA	NA	False	AATAAA	-22	NA	185204028	185169025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185170341_185175785_185176052_185190142_185191213_185203784
transcript_73602.known	chr4	-	903	3	NNC	ENSG00000164323.15	novel	4851	5	NA	NA	35	-233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	117	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGATCAAAAAGTGAAAA	-185198720	True	NA	-13	True	NA	NA	NA	185203965	185190375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_185191048_185191049_185191213_185203897
transcript_73605.known	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	25.8754167132173	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	-185422734	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_73607.known	chr4	-	2348	12	FSM	ENSG00000109775.11	ENST00000514247.5	2348	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	70.6029522010527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAACTTAAGTCTT	-185422749	True	NA	NA	False	CATAAA	-31	NA	185425979	185399539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418611_185418771_185422484_185422564_185425865
transcript_73609.known	chr4	-	1672	12	FSM	ENSG00000109775.11	ENST00000510755.5	1672	12	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	71.206950166863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAATTTTTCACATTA	-185422739	True	NA	-62	True	AATAAA	-5	NA	185425969	185400333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185400479_185403493_185403619_185405779_185405960_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_73611.nic	chr4	-	1524	12	NIC	ENSG00000109775.11	novel	592	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	69.9871298676224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGTGTTCATTCCATTC	-185422756	True	NA	1	True	AATATA	-23	NA	185425986	185402261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_185402345_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_73618.known	chr4	+	784	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.52268050859363	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTCCGTGCAGTATT	185396573	True	NA	NA	False	ATTAAA	-16	NA	185396840	185400241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
transcript_73623.known	chr4	+	1333	8	FSM	ENSG00000205129.9	ENST00000378850.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	10.8364464391502	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	185425860	True	NA	6	True	AATAAA	-17	NA	185426253	185449826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185426397_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_73631.known	chr4	-	2658	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.54666899441312	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTATCCAAAATACAT	-185534574	True	NA	NA	False	AATAAA	-24	NA	185535507	185500659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_73632.known	chr4	+	832	6	FSM	ENSG00000205129.9	ENST00000508698.3	832	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	18.1879080710235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTTAACTATGAGTAAT	185425907	False	NA	NA	False	NA	NA	NA	185426300	185449668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185426397_185429333_185429512_185436045_185436184_185440539_185440720_185444963_185445131_185449595
transcript_73634.known	chr4	-	705	5	FSM	ENSG00000168491.10	ENST00000507501.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.3166247903554	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATCCAAAATTACTGTG	-185470975	True	NA	NA	False	NA	NA	NA	185471103	185459925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185462993_185463050_185470944
transcript_73635.known	chr4	+	394	2	FSM	ENSG00000249679.3	ENST00000512874.2	530	2	101	35	21	-35	multi-exon	FALSE	canonical	3	30	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGGAAGCGACGGTGG	185471282	True	NA	7	True	ATTAAA	-15	NA	185471515	185472263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185471761_185472114
transcript_73643.nnic	chr4	+	2630	3	NNC	ENSG00000164342.13	novel	2310	3	NA	NA	-206	74	intron_retention	FALSE	canonical	0	0	junction_1	3	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATTGTCTACTGATTAA	186081215	True	NA	5	True	AATAAA	-17	NA	186081404	186085098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186081728_186082319_186084173_186084644
transcript_73645.nnic	chr4	+	1742	11	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8771	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.7396709029861	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	186242027	True	NA	14	True	AATAAA	-15	NA	186242260	186258471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186242367_186244748_186244807_186250242_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_73648.nnic	chr4	+	1722	10	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8809	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.4467786084701	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	14	True	AATAAA	-15	NA	186242222	186258471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186242367_186250242_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_73653.nnic	chr4	+	1455	9	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-528	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.8172854858649	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	186250041	True	NA	14	True	AATAAA	-15	NA	186250503	186258471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186250541_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_73667.nnic	chr4	-	746	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_2	47	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	-186247266	False	NA	-7	True	ATTAAA	-16	NA	186247323	186241999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242330_186245315_186245479_186247070
transcript_73669.nnic	chr4	-	550	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_2	44	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	-186247284	False	NA	-7	True	ATTAAA	-16	NA	186247341	186241999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242330_186245315_186245479_186247284
transcript_73672.nnic	chr4	-	641	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	422	junction_1	0	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTAGTGGTCT	-186247322	False	NA	-5	True	ATTAAA	-18	NA	186247379	186241997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242330_186247070
transcript_73674.nnic	chr4	-	384	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	129	junction_1	0	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	-186247281	False	NA	-7	True	ATTAAA	-16	NA	186247338	186241999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242330_186247284
transcript_73677.known	chr4	+	432	1	FSM	ENSG00000272218.1	ENST00000606881.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCGTATTTGGTATTCAT	186892496	False	NA	2	True	AATAAA	-16	NA	186892551	186892983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_186892600_186893000
transcript_73680.known	chr4	+	2647	4	FSM	ENSG00000179059.10	ENST00000326866.5	2647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.024973085399	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCAAGTCTGTAT	187972420	True	NA	44	True	ATTAAA	-16	NA	187995770	188005046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_187995841_187999107_187999274_187999608_187999686_188002712
transcript_73684.known	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_2	55.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	187972420	True	NA	43	True	ATTAAA	-15	NA	187995770	188005045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_187995841_187999608_187999686_188002712
transcript_73695.nnic	chr4	-	1837	8	NNC	ENSG00000179046.9	novel	1998	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	69.4332743851011	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188107637	True	NA	-25	True	AATAAA	-14	NA	188109603	188091271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105430_188109242
transcript_73696.nic	chr4	-	2061	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	52.1993822779933	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188109652	False	NA	-25	True	AATAAA	-14	NA	188109669	188091271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
transcript_73697.known	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	56.9933759129882	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188107637	True	NA	-25	True	AATAAA	-14	NA	188109603	188091271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
transcript_73699.nnic	chr4	-	2026	8	NNC	ENSG00000179046.9	novel	1998	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	75.3021126082483	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188109594	False	NA	-25	True	AATAAA	-14	NA	188109611	188091271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101274_188104836_188104933_188105179_188105588_188109242
transcript_73708.known	chr4	-	104	1	FSM	ENSG00000201085.1	ENST00000364215.1	104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAAGAAAATTCTTA	NA	False	NA	NA	False	NA	NA	NA	188121634	188121530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_188121500_188121600
transcript_73709.known	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_8	24.3964649078509	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	NA	False	NA	42	True	AATAAA	-15	NA	189940871	189963192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
transcript_73713.nic	chr5	+	2803	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-53	32856	-53	0	5prime_fragment	TRUE	canonical	3	192	junction_1	33.9493740737587	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	86743	True	NA	18	True	AATAAA	-29	NA	92114	157110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_73723.known	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	2.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-216444	True	NA	NA	False	NA	NA	NA	218153	196867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_205959_216728_216860_218092
transcript_73725.nnic	chr5	+	813	3	NIC	ENSG00000249915.9	novel	3500	5	NA	NA	0	0	intron_retention	TRUE	canonical	3	23	junction_2	474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262906	True	NA	13	True	AATAAA	-13	NA	271623	314969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_271822_272710_272773_314416
transcript_73727.known	chr5	+	2693	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_11	54.0355136432872	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	200401	True	NA	NA	False	NA	NA	NA	218319	257082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_73732.known	chr5	+	2148	14	FSM	ENSG00000073578.18	ENST00000510361.5	2148	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	234.827646729764	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTTTTATTTCCAA	200399	True	NA	NA	False	AATAAA	-13	NA	218317	256679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_73737.known	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	228.47980399443	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	200384	True	NA	NA	False	AATAAA	-16	NA	218302	256682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
transcript_73751.known	chr5	+	3665	24	FSM	ENSG00000286001.1	ENST00000651543.1	3665	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	400.811313319233	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATGTTAGACGTGTG	200379	True	NA	-1	True	AAAAAG	-41	NA	218297	314955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333_256456_263700_263815_264322_264386_270734_270855_271410_271822_272710_272773_304176_304222_306601_306761_311292_311403_313700_313851_314416
transcript_73753.known	chr5	+	1088	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	313.918205907208	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262939	True	NA	13	True	AATAAA	-13	NA	271656	314969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
transcript_73756.known	chr5	+	1073	5	NIC	ENSG00000249915.9	novel	1050	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_1	333.022803273289	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
transcript_73757.nnic	chr5	+	1007	5	NNC	ENSG00000249915.9	novel	878	4	NA	NA	-3696	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	337.663293829815	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	NA	False	NA	18	True	AATAAA	-18	NA	302984	314974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_303120_304176_304222_306601_306761_311292_311403_314416
transcript_73759.known	chr5	+	672	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	414.753742197303	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCTGGTTCTATA	262929	True	NA	6	True	NA	NA	NA	271646	314806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_304176_304222_314416
transcript_73760.known	chr5	+	931	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	407.840110282885	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_311292_311403_314416
transcript_73762.known	chr5	+	1156	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	455.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	262939	True	NA	13	True	AATAAA	-14	NA	271656	276940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_276011
transcript_73766.known	chr5	-	522	2	FSM	ENSG00000248925.2	ENST00000512642.2	1075	2	0	553	0	-553	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGTCTCTTCATAAAGT	NA	False	NA	NA	False	NA	NA	NA	271516	269857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_270208_271344
transcript_73767.known	chr5	-	1663	1	FSM	ENSG00000221990.5	ENST00000623673.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTATTGGCTGGGCGC	-442673	False	NA	NA	False	NA	NA	NA	443160	441497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_441500_443200
transcript_73768.known	chr5	+	2801	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	35.9753001686188	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	441249	True	NA	11	True	ATTAAA	-24	NA	443175	467290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_7377.known	chr1	+	1003	4	FSM	ENSG00000143553.11	ENST00000368685.6	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_3	45.675181687895	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	153654329	True	NA	37	True	AATAAA	-35	NA	153658702	153661852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153658887_153659137_153659185_153659447_153659567_153661199
transcript_73770.known	chr5	+	2366	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_9	18.0929647073338	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	609830	True	NA	8	True	AATAAA	-21	NA	612339	653553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_73773.known	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_7	35.4185293627816	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	885323	True	NA	81	True	ACTAAA	-23	NA	892883	918120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
transcript_73778.known	chr5	-	2492	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_10	83.1026990762033	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAAGCCTTTGAGTCA	NA	False	NA	-15	True	ATTAAA	-20	NA	1345099	1317751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
transcript_73782.known	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	61.8664337205708	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-1514031	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
transcript_73783.nic	chr5	-	1344	8	FSM	ENSG00000185986.13	ENST00000689786.1	1332	8	-13	1	-10	-1	multi-exon	FALSE	canonical	3	20	junction_4	41.5063309653369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591283	True	NA	NA	False	AATAAA	-16	NA	1594514	1571956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_73785.nnic	chr5	-	1136	7	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	-10	-1	combination_of_known_splicesites	TRUE	canonical	3	27	junction_3	40.7703596037884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591283	True	NA	NA	False	AATAAA	-16	NA	1594514	1571956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_1572287_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_73786.nnic	chr5	-	986	6	FSM	ENSG00000185986.13	ENST00000684972.1	1127	6	137	4	-10	-1	multi-exon	FALSE	canonical	2	5	junction_3	49.5758005482514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591283	True	NA	NA	False	AATAAA	-16	NA	1594514	1571956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1589246_1589366_1593112_1593285_1594394
transcript_73787.known	chr5	-	736	3	FSM	ENSG00000185986.13	ENST00000436493.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	46.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCAGTCTCTGCTAGT	-1591389	True	NA	NA	False	NA	NA	NA	1594620	1589027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1589366_1593112_1593285_1594394
transcript_73790.nic	chr5	-	1515	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	59	10	-3	0	multi-exon	FALSE	canonical	3	70	junction_1	29	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGGTTTTTTGTTTGT	-1632211	True	NA	-11	True	TTTAAA	-35	NA	1633950	1628521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_73792.nic	chr5	-	1339	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	59	186	-3	2	multi-exon	FALSE	canonical	3	70	junction_1	29	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-1632211	True	NA	-20	True	AATAAA	-14	NA	1633950	1628697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_73794.known	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-1789343	True	NA	-4	True	ATTAAA	-17	NA	1799837	1798384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1798948_1799791
transcript_73795.known	chr5	-	686	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTAGTTCATTCATTCT	-1799869	False	NA	-6	True	ATTAAA	-15	NA	1799895	1798386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1798948_1799770
transcript_73796.known	chr5	-	587	2	FSM	ENSG00000171421.13	ENST00000382647.7	587	2	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTAGTTCATTCAT	-1789344	True	NA	-9	True	ATTAAA	-12	NA	1799838	1798389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1798948_1799809
transcript_73809.known	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_3	89.2785901919753	3667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1769120	True	NA	20	True	AATAAA	-22	NA	1801406	1816048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
transcript_73813.known	chr5	+	550	3	FSM	ENSG00000145494.12	ENST00000469176.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	2960	junction_2	73	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCCAAGCGTCTTTCCT	1769128	True	NA	NA	False	NA	NA	NA	1801414	1814699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_1801550_1802320_1802375_1814338
transcript_73815.nnic	chr5	+	385	2	FSM	ENSG00000249116.2	ENST00000692531.1	511	2	13	113	13	0	multi-exon	FALSE	canonical	3	26	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAATTGTTTCTGAATT	1883276	False	NA	9	True	TATAAA	-20	NA	1883327	1884645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_1883547_1884479
transcript_73816.known	chr5	+	425	2	FSM	ENSG00000249116.2	ENST00000506335.2	432	2	2	5	2	4	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTCTGAATTCTGT	1883933	True	NA	13	True	TATAAA	-24	NA	1883965	1884649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_1884221_1884479
transcript_73817.known	chr5	-	2630	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	37.4391172438667	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-2748069	True	NA	-8	True	AATAAA	-17	NA	2751662	2745844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
transcript_73818.known	chr5	-	432	2	FSM	ENSG00000250529.1	ENST00000507950.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGTAGTCTTTAAAAAT	-5078301	True	NA	NA	False	AATAAA	-14	NA	5078311	5069191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_5069516_5078203
transcript_7382.known	chr1	+	922	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	291	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	153654340	True	NA	14	True	AATAAA	-12	NA	153658713	153661829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153658887_153659447_153659567_153661199
transcript_73822.known	chr5	-	1633	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	17	34	0	multi-exon	TRUE	canonical	3	51	junction_3	29.9777695412228	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5138955	True	NA	-39	True	AATAAA	-4	NA	5140119	5132100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
transcript_73823.nnic	chr5	-	1597	4	NNC	ENSG00000250579.3	novel	1628	4	NA	NA	-612	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	48.7259912389909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5140750	False	NA	-39	True	AATAAA	-4	NA	5140765	5132100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_5133233_5133636_5133771_5133867_5134071_5140637
transcript_73824.nnic	chr5	-	1419	3	NIC	ENSG00000250579.3	novel	5854	3	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	58.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5138944	True	NA	-39	True	AATAAA	-4	NA	5140108	5132100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_5133233_5133636_5133771_5139955
transcript_73825.known	chr5	-	1101	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	6.94422221866655	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTCCCAGAGGGT	-6372229	True	NA	0	True	AATATA	-27	NA	6378547	6371873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
transcript_73827.known	chr5	-	3056	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_17	62.5707500788675	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTGATTCCTGTTT	-6614550	True	NA	36	True	AATAAA	-15	NA	6633044	6599238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_7383.known	chr1	+	4185	22	FSM	ENSG00000169418.10	ENST00000368680.4	4185	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_21	15.6597900670255	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	153678043	True	NA	27	True	ATTAAA	-17	NA	153678687	153693992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153679830_153680500_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686122_153686201_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
transcript_73841.nnic	chr5	+	832	3	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	7264002	False	NA	7	True	AATAAA	-19	NA	7264025	7273901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr5_+_7264177_7266032_7266135_7273322
transcript_73844.known	chr5	+	3274	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	64.9036963193805	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	27	True	AATAAA	-30	NA	7869103	7901124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_73846.known	chr5	+	2441	15	FSM	ENSG00000124275.15	ENST00000513439.5	2441	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	64.3224101614639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCCTGTTGCCTTGAG	NA	False	NA	NA	False	NA	NA	NA	7869103	7900279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869216_7870769_7870924_7873372_7873513_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_73847.known	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	50.6071806633592	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	7865080	True	NA	16	True	AATAAA	-19	NA	7869147	7901113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_7385.known	chr1	+	5252	30	FSM	ENSG00000143624.14	ENST00000318967.7	5252	30	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	68.6307738215072	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTGGCCCCAATT	NA	False	NA	5	True	ATTAAA	-17	NA	153728049	153774808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
transcript_73852.known	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	59.8215294406235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865080	True	NA	27	True	AATAAA	-30	NA	7869147	7901124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_73856.nic	chr5	+	3110	14	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	135	junction_1	40.527585754651	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865072	True	NA	27	True	AATAAA	-30	NA	7869139	7901124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_7386.known	chr1	+	1267	3	FSM	ENSG00000284738.2	ENST00000641448.2	1325	3	53	5	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	153923267	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153923963_153928634_153928771_153934735
transcript_73862.nic	chr5	-	2349	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	34	junction_6	40.2012299424892	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867757	True	NA	-9	True	AATAAA	-16	NA	7869038	7859158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
transcript_73863.known	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	35.0460015154685	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867750	True	NA	-9	True	AATAAA	-16	NA	7869031	7859158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_73866.known	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	52.5067614693574	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	-7867729	True	NA	NA	False	NA	NA	NA	7869010	7859380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
transcript_73867.known	chr5	-	819	6	FSM	ENSG00000124279.12	ENST00000513658.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	65.2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGACTGGTGATCTGA	-7867745	True	NA	NA	False	ATTAAA	-39	NA	7869026	7859335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7868978
transcript_73870.known	chr5	+	546	4	FSM	ENSG00000124275.15	ENST00000510279.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	46.6499970227461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGGTTTTGAAGCAA	7865080	True	NA	NA	False	AAGAAA	-3	NA	7869147	7878149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943
transcript_73871.known	chr5	+	478	3	FSM	ENSG00000124275.15	ENST00000514220.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCCCACTCTCACAAGC	7865080	True	NA	NA	False	NA	NA	NA	7869147	7878235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869216_7875257_7875376_7877943
transcript_73872.known	chr5	-	397	3	FSM	ENSG00000249159.6	ENST00000607662.1	397	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCATCTTCGTCATCA	-8457465	True	NA	NA	False	NA	NA	NA	8457532	8446100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_8446356_8452222_8452281_8457448
transcript_73873.known	chr5	+	3239	2	FSM	ENSG00000247516.8	ENST00000606459.1	3239	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCCTTTTCAGTTGTT	8456805	True	NA	NA	False	AATAAA	-15	NA	8457690	8463095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_8457767_8459932
transcript_73876.known	chr5	+	1799	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	4	116	4	-116	multi-exon	FALSE	canonical	3	40	junction_2	28	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATGTCCTCTCTATTC	9545114	True	NA	NA	False	AAAAAG	-19	NA	9546199	9550609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_9546531_9548989_9549150_9549301
transcript_73877.known	chr5	+	842	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	5	-411	5	411	multi-exon	FALSE	canonical	3	96	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	9545204	True	NA	NA	False	NA	NA	NA	9546289	9549590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_9546531_9548989
transcript_7388.known	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	50.7851956250496	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153958577	False	18768	0	True	AATAAA	-15	NA	153958612	153947674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_73880.known	chr5	-	2651	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	12.3161479367536	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCAGCCTCAGGTATGT	-10248902	True	NA	-3	True	ATTAAA	-18	NA	10249888	10225506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_73881.nnic	chr5	-	2035	5	NNC	ENSG00000150756.14	novel	2651	5	NA	NA	-292	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	15.7003184681076	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGATCATTTTCATTTA	-10250177	False	NA	-26	True	TATAAA	-9	NA	10250189	10226329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249951
transcript_73882.known	chr5	-	534	5	FSM	ENSG00000150756.14	ENST00000510052.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	18.417043736713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCCCACATTGGACTC	-10248902	True	NA	NA	False	NA	NA	NA	10249888	10227579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10227648_10235210_10235262_10236521_10236616_10239066_10239357_10249857
transcript_73887.known	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1903515328563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-10249885	False	NA	NA	False	NA	NA	NA	10249897	10226955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
transcript_73890.known	chr5	-	789	3	FSM	ENSG00000150756.14	ENST00000508553.1	789	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGCCTGTGTGAG	-10248902	True	NA	NA	False	TATAAA	-28	NA	10249888	10236147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10236616_10239066_10239357_10249857
transcript_73905.known	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	4165	junction_6	242.619063554371	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	10190751	True	NA	15	True	AATAAA	-15	NA	10250279	10266389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_73917.known	chr5	+	1997	11	FSM	ENSG00000150753.12	ENST00000515676.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	1284.3152416755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTGTTTGGTAAC	10250516	False	NA	8	True	NA	NA	NA	10250536	10264902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10250894_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_73932.known	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	1323.84650932308	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	10190687	True	NA	31	True	AATAAA	-21	NA	10250215	10264925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_73948.known	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	21.7678662252413	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-10304084	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
transcript_73950.known	chr5	-	901	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTTGACTAATGTTA	-10353190	True	NA	-2	True	AATAAA	-29	NA	10353601	10352700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10352700_10353600
transcript_73952.known	chr5	+	9641	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	29.1516311722003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGATGCTT	10353521	True	NA	NA	False	AATAAA	-17	NA	10353694	10440388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_73954.known	chr5	+	4734	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	28.6407040862398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	10351664	True	NA	4	True	NA	NA	NA	10353714	10434285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_73955.known	chr5	+	3062	25	FSM	ENSG00000145495.16	ENST00000449913.6	3062	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	42.1514918346776	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTATATTAATTTATT	10351652	True	NA	-11	True	ATTAAA	-28	NA	10353702	10433961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_73957.nic	chr5	+	1081	4	ISM	ENSG00000145495.16	ENST00000511802.5	4734	25	-22	51801	-2	-7888	5prime_fragment	FALSE	canonical	3	115	junction_1	29.4882274061286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGCAAAAGATGAATTC	NA	False	NA	NA	False	NA	NA	NA	10353692	10382484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799
transcript_73969.nic	chr5	-	1753	12	ISM	ENSG00000039139.11	ENST00000681290.1	15645	79	34	221029	34	0	5prime_fragment	FALSE	canonical	0	0	junction_1	1.55876619995293	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGTGTTTATTTTTTC	-14011734	True	NA	NA	False	AATAAA	-13	NA	14011784	13911356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_13911494_13913742_13913959_13914519_13914643_13916347_13916456_13917142_13917257_13919175_13919353_13920479_13920618_13922106_13922329_13923279_13923441_13928093_13928179_13931109_13931245_14011647
transcript_73970.known	chr5	+	7040	8	FSM	ENSG00000145569.6	ENST00000274217.4	7040	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	8.83869045614744	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGTTTCAGGCAAGATT	14581084	True	NA	NA	False	AATAAA	-28	NA	14581791	14616180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_14581959_14600964_14601125_14601212_14601245_14601350_14601443_14602182_14602333_14607329_14607459_14608747_14609018_14610140
transcript_73971.known	chr5	+	3817	2	FSM	ENSG00000286970.1	ENST00000659482.1	3817	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTTACTTCATTAAAC	14728695	True	NA	NA	False	NA	NA	NA	14728717	14733540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_14728973_14729978
transcript_73973.known	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	28.7930547181087	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	-16460088	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
transcript_73977.known	chr5	-	4839	23	FSM	ENSG00000145555.15	ENST00000515803.5	4839	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	103.274537836241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAATCGACCGTAACT	-16738248	False	160	NA	False	NA	NA	NA	16738414	16666379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_73979.nic	chr5	-	971	5	ISM	ENSG00000145555.15	ENST00000505695.5	4803	23	-17	36415	-17	0	5prime_fragment	FALSE	canonical	0	0	junction_3	147.431975839707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	-16742079	True	NA	9	True	NA	NA	NA	16742245	16702976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_73983.nnic	chr5	+	1182	5	NIC	ENSG00000183666.18	novel	1622	9	NA	NA	-9	-8009	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	11.3880419739304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGAAAGGGTCT	21458270	True	NA	NA	False	NA	NA	NA	21459470	21502893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21502110
transcript_73985.nnic	chr5	+	1127	5	NIC	ENSG00000183666.18	novel	1569	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	14.6692706021806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTACCTTGGTGCTTGCTT	21458270	True	NA	NA	False	AATAAA	-16	NA	21459470	21510904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21510176
transcript_73987.nnic	chr5	+	1867	5	NIC	ENSG00000183666.18	novel	1706	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	15.3195136998535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGCATTATTTCAATTT	21458270	True	NA	NA	False	AATAAA	-19	NA	21459470	21523805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21522337
transcript_73989.nnic	chr5	+	637	4	FSM	ENSG00000183666.18	ENST00000691699.1	614	4	-9	-14	-9	14	multi-exon	FALSE	canonical	2	3	junction_3	16.1107279647928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAAATGATAATGGTAC	21458270	True	NA	NA	False	TATAAA	-29	NA	21459470	21466991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618
transcript_73990.known	chr5	+	1305	4	FSM	ENSG00000183666.18	ENST00000685140.1	1644	4	61	278	0	1	multi-exon	FALSE	canonical	3	17	junction_3	9.56846672960488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTTATTTATGT	21458312	True	NA	NA	False	AATAAA	-22	NA	21459512	21474439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21473356
transcript_73998.known	chr5	-	638	3	FSM	ENSG00000248605.5	ENST00000507887.5	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAACTCTATTTTTCTC	-25445310	True	NA	-68	True	NA	NA	NA	25445925	25413438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_25413845_25422729_25422856_25445819
transcript_74009.nnic	chr5	-	773	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-239	-18170	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	30.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATTATAGA	NA	False	NA	NA	False	NA	NA	NA	25446164	25433815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_74012.nnic	chr5	-	669	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	0	157	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTGATATTTTAAACAA	-25445310	True	NA	-23	True	AATAAA	-16	NA	25445925	25413281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_25413845_25445819
transcript_74013.nnic	chr5	-	427	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	0	-85	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGAAAGTTTATTTAC	-25445310	True	NA	NA	False	CATAAA	-11	NA	25445925	25413523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_25413845_25445819
transcript_74014.nnic	chr5	-	582	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-18090	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATTGGATATGAAGTAA	-25445310	True	NA	NA	False	AATAAA	-18	NA	25445925	25433735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25445819
transcript_74015.nnic	chr5	-	723	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-220	-18169	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAATTATAGAA	NA	False	NA	NA	False	NA	NA	NA	25446145	25433814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25445819
transcript_74017.known	chr5	+	1121	6	FSM	ENSG00000250337.8	ENST00000668103.1	1121	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.2268435118735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467103	True	NA	14	True	AATAAA	-26	NA	27472351	27496404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27494234_27494336_27495948
transcript_74021.nnic	chr5	+	791	5	FSM	ENSG00000250337.8	ENST00000687778.1	755	5	-36	0	-2	0	multi-exon	FALSE	canonical	3	7	junction_4	46.7406407743839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGTTAGGTGTGTAT	27467019	True	NA	NA	False	AATAAA	-21	NA	27472267	27482554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27482411
transcript_74022.nic	chr5	+	909	5	ISM	ENSG00000250337.8	ENST00000664566.1	1274	7	-26	11209	-2	0	5prime_fragment	FALSE	canonical	3	21	junction_2	41.6563320516821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACCTGTAACATTAAGAT	27467019	True	NA	NA	False	ATTAAA	-15	NA	27472267	27485186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27484925
transcript_74024.known	chr5	+	1045	5	FSM	ENSG00000250337.8	ENST00000657375.2	1111	5	66	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	48.4735752756076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467052	True	NA	14	True	AATAAA	-26	NA	27472300	27496404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27489281_27489387_27495948
transcript_74025.known	chr5	+	1058	5	FSM	ENSG00000250337.8	ENST00000665451.1	1058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.3919824442911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467035	True	NA	14	True	AATAAA	-26	NA	27472283	27496404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27494234_27494336_27495948
transcript_74026.nnic	chr5	+	719	4	NIC	ENSG00000250337.8	novel	755	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	48.251655124174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGTTAGGTGTGTAT	27467019	True	NA	NA	False	AATAAA	-21	NA	27472267	27482554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_27472520_27475534_27475696_27477638_27477802_27482411
transcript_74027.known	chr5	+	1325	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	33.7276675083759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	27467031	True	NA	NA	False	AATAAA	-28	NA	27472279	27485686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
transcript_7403.known	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	44.1246830506576	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966393	True	NA	15	True	AATAAA	-15	NA	153967920	153974359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_74030.known	chr5	+	1627	4	FSM	ENSG00000250337.8	ENST00000669423.1	1627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.3916348004691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467027	True	NA	14	True	AATAAA	-26	NA	27472275	27496404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27493569_27494336_27495948
transcript_74031.known	chr5	+	1605	4	FSM	ENSG00000250337.8	ENST00000655107.1	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.3916348004691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTTATGAAAGACATTT	NA	False	NA	NA	False	AATAAA	-15	NA	27472222	27496994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27494234_27494336_27495948
transcript_74033.nic	chr5	+	942	3	ISM	ENSG00000250337.8	ENST00000659860.1	1325	4	-12	7519	-2	140	5prime_fragment	FALSE	canonical	3	51	junction_2	36.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAGAAAAAAAAGAA	27467019	True	NA	29	True	NA	NA	NA	27472267	27478167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_27472520_27475534_27475696_27477638
transcript_74034.known	chr5	+	1610	3	FSM	ENSG00000250337.8	ENST00000512067.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTGAAATAACTTA	27467043	True	NA	NA	False	ATTAAA	-9	NA	27472291	27486146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27484925
transcript_74035.nic	chr5	+	2902	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-33	-157	-2	157	multi-exon	FALSE	canonical	3	124	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACATAATAAAACACCT	27467019	True	NA	46	True	AAAAAG	-17	NA	27472267	27478184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534
transcript_74037.known	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_29	71.9992610977079	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-31522573	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_74043.nic	chr5	+	3259	9	NIC	ENSG00000082213.18	novel	3572	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	89.0286997265489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528378	True	NA	17	True	AATAAA	-18	NA	31532276	31554808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74047.known	chr5	+	3572	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	29.3342802877453	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	31528402	True	NA	19	True	ATTAAA	-30	NA	31532300	31555053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74050.nic	chr5	+	3130	9	NIC	ENSG00000082213.18	novel	3117	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	96.5361816885255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528378	True	NA	17	True	AATAAA	-18	NA	31532276	31554808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_31532474_31534271_31534418_31535743_31535894_31538480_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74051.known	chr5	+	3117	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	99.060508655064	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528388	True	NA	17	True	AATAAA	-18	NA	31532286	31554808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74052.known	chr5	-	1074	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	345.460401332611	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGCTTTTGCT	-32166718	True	NA	NA	False	NA	NA	NA	32174302	32126366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
transcript_74053.known	chr5	-	2678	4	FSM	ENSG00000113384.14	ENST00000265070.7	2678	4	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	33.436506994601	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGTCATTT	-32166735	True	NA	-11	True	AATAAA	-28	NA	32174319	32124715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173809
transcript_74054.known	chr5	+	802	1	FSM	ENSG00000272086.1	ENST00000606994.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCTGTGGCTAAAGA	32174379	False	NA	8	True	AATAAA	-20	NA	32174470	32175272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32174500_32175300
transcript_74055.known	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	546	junction_16	63.6680275219192	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	-32427933	True	NA	-11	True	AGTAAA	-17	NA	32444740	32354349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_7406.known	chr1	+	1749	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	43.2155093330344	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966374	True	NA	15	True	AATAAA	-15	NA	153967901	153974359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_74063.known	chr5	+	1658	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1908.65875420411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	32555596	True	NA	41	True	NA	NA	NA	32585558	32601988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
transcript_7407.known	chr1	+	1496	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	54.2361093327642	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	153967971	True	NA	17	True	AATAAA	-17	NA	153968242	153974361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_74072.known	chr5	+	771	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1966.17069452273	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	32555608	True	NA	-37	True	ATTAAA	-42	NA	32585570	32601282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_7408.known	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	49.3986054683958	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	153967965	True	NA	12	True	AATAAA	-12	NA	153968236	153974356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_74081.known	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3694	junction_4	227.03468897946	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	32555594	True	NA	13	True	AATAAA	-14	NA	32585556	32604079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_74097.known	chr5	+	562	6	FSM	ENSG00000113387.12	ENST00000502897.5	562	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1967.40722780008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTCTAAATGTTCTC	32555625	True	NA	43	True	NA	NA	NA	32585587	32601150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32586428_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_74104.known	chr5	+	2672	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	156.852450914943	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	33421485	True	NA	13	True	AATAAA	-16	NA	33440964	33468086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_74115.known	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_2	380.995835921627	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	33421484	True	NA	12	True	AATAAA	-15	NA	33440963	33468085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_74125.nnic	chr5	-	822	4	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-607	-119	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	13.4246870437348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTATCTCCTCTGTAT	NA	False	NA	-7	True	ATTAAA	-22	NA	33892626	33751316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_33751549_33881118_33881481_33891729_33891842_33892510
transcript_74126.known	chr5	-	1003	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGAGTCTCTGCATA	NA	False	NA	NA	False	TATAAA	-15	NA	33892019	33751197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33751549_33881118_33881481_33891729
transcript_74132.known	chr5	-	4108	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	4.20565096031518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTTATTTACATTTT	-34007026	True	NA	NA	False	AGTAAA	-40	NA	34008050	33986164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_74136.known	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.355662392986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	-34007007	True	NA	NA	False	AATAAA	-20	NA	34008031	33987173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
transcript_74139.known	chr5	-	1316	5	FSM	ENSG00000242110.8	ENST00000426255.6	1316	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	36.8951216287465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTGGACATT	-34007060	True	NA	NA	False	AATAAA	-12	NA	34008084	33997006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33997519_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_74140.known	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_10	95.3680541058935	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	34645933	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_74143.known	chr5	+	2941	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	172.062477297492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTCCTTGGCAGGAC	34646044	False	NA	0	True	NA	NA	NA	34656438	34830765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_74148.known	chr5	+	550	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	48	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCGATAAGAAATAGCAT	34646016	True	NA	NA	False	NA	NA	NA	34656410	34757868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34656476_34686871_34686956_34757467
transcript_74150.known	chr5	-	1565	2	FSM	ENSG00000272323.1	ENST00000606401.1	1565	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTCTTTTTTTGA	-34839215	True	NA	NA	False	AATAAA	-15	NA	34839278	34837548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34839018_34839182
transcript_74155.known	chr5	+	1591	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	0	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_9	82.9584158806814	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	34907532	True	NA	NA	False	ATTAAA	-28	NA	34915710	34925996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_74161.known	chr5	+	743	8	FSM	ENSG00000113460.13	ENST00000506023.1	743	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	504.134578728129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTGTAACACCAGC	34907573	False	NA	56	True	AAGAAA	-37	NA	34915751	34925345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34915898_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_74168.known	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	126.799601296254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	-34912832	True	NA	-109	True	NA	NA	NA	34915615	34908654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
transcript_74173.known	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	54.2217668469038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	-34912721	True	NA	2	True	AATAAA	-21	NA	34915504	34905259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_74183.known	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	102.255806681088	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-34912765	True	NA	-8	True	AATAAA	-19	NA	34915548	34908553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
transcript_74190.known	chr5	-	664	4	FSM	ENSG00000113456.19	ENST00000511456.3	664	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	153.258677477728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGGATATGACGAGT	-34912734	True	NA	5	True	AATAAA	-38	NA	34915517	34911617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34911813_34913926_34914027_34914694_34914962_34915415
transcript_74195.known	chr5	-	1678	3	FSM	ENSG00000113456.19	ENST00000628399.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACGAAGATCGCTTGAGC	NA	False	NA	-97	True	NA	NA	NA	34916769	34913969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34914027_34914694_34914962_34915415
transcript_74196.known	chr5	+	6208	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	84.9866002509938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	34926665	True	NA	8	True	AATAAA	-18	NA	34929592	34958964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
transcript_74198.known	chr5	+	6107	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_9	37.7812319492537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	34926631	True	NA	8	True	AATAAA	-18	NA	34929558	34958964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_74202.known	chr5	+	2338	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	92.6972322105905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	34929933	False	NA	-28	True	AAAAAG	-29	NA	34929976	34955168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_74204.known	chr5	-	11581	10	FSM	ENSG00000113494.17	ENST00000618457.5	11581	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTGGAGGGTCTTTA	-35230451	True	NA	NA	False	AATAAA	-16	NA	35230487	35055701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_35066103_35068215_35068286_35068778_35068879_35070123_35070266_35072574_35072745_35084469_35084640_35086207_35086341_35089550_35089664_35118060_35118123_35230267
transcript_74205.known	chr5	-	4918	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.72581562625261	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAGTCTATTGAGTAA	-35991257	True	NA	NA	False	AAAAAG	-14	NA	35991390	35951005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_74210.known	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	17.8271017149607	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	-36065542	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
transcript_74213.known	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	53.3389163744447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	-36065542	True	NA	-97	True	NA	NA	NA	36066882	36035336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
transcript_74214.known	chr5	-	1476	6	FSM	ENSG00000168671.10	ENST00000504685.5	1476	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	65.0003076915794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACACCCTGACTCTTCC	-36065542	True	NA	-115	True	NA	NA	NA	36066882	36035354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36051869_36051985_36064248_36064351_36066695
transcript_74219.nic	chr5	-	1266	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	371	-727	-31	727	3prime_fragment	FALSE	canonical	3	160	junction_2	10.2089285540757	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	-36065573	True	NA	-5	True	ATTAAA	-20	NA	36066913	36048589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
transcript_74220.nic	chr5	-	1159	3	ISM	ENSG00000168671.10	ENST00000513300.5	1924	6	-26	13253	-26	727	5prime_fragment	FALSE	canonical	3	17	junction_2	73	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	-36065568	True	NA	-5	True	ATTAAA	-20	NA	36066908	36048589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_36049421_36051869_36051985_36066695
transcript_74224.known	chr5	-	2507	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	26.2480223576168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGTATATC	-36241921	True	NA	0	True	AATAAA	-20	NA	36242142	36193712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_74225.known	chr5	-	4011	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	16.0361162627797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTCACTTTTTAAT	-36241704	False	NA	NA	False	ATTAAA	-21	NA	36241925	36192588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
transcript_74234.known	chr5	+	3715	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_9	93.3537014812317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	36145831	True	NA	NA	False	TTTAAA	-45	NA	36152110	36184319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74235.known	chr5	+	1537	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_9	105.806952092531	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	NA	False	NA	27	True	AATAAA	-30	NA	36151988	36184041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_74237.nic	chr5	+	1315	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	200.734238173262	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	36145784	True	NA	15	True	AATAAA	-18	NA	36152063	36184029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_74238.known	chr5	+	3294	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	184.77418650883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	36145827	True	NA	-8	True	TTTAAA	-3	NA	36152106	36184006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74239.nic	chr5	+	1338	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	190.554413160651	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	36145784	True	NA	15	True	AATAAA	-18	NA	36152063	36184029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_74244.known	chr5	+	1646	8	FSM	ENSG00000145604.17	ENST00000509692.5	1646	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	247.020944332207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCATCTTTTCTAGGAA	36145848	True	NA	NA	False	AAAAAG	-24	NA	36152127	36182514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74252.known	chr5	+	3919	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	25.5429920808907	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	36603444	True	NA	16	True	AATAAA	-23	NA	36606605	36688334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_74254.known	chr5	+	4194	11	FSM	ENSG00000079215.15	ENST00000680232.1	4194	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	66.2057399324258	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	36606150	False	NA	9	True	AATAAA	-16	NA	36606464	36688327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679349_36679491_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_74259.known	chr5	+	2368	3	FSM	ENSG00000079215.15	ENST00000681775.1	2368	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	27.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTTGTGTAATTTTT	36603434	True	NA	NA	False	AAGAAA	-6	NA	36606595	36631401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36608328_36608605_36629449
transcript_74260.known	chr5	+	550	3	FSM	ENSG00000079215.15	ENST00000681776.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGATGTTAAAAGTTA	36603369	True	NA	-97	True	AAGAAA	-16	NA	36606530	36608534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36607172_36607312_36608328
transcript_74261.known	chr5	+	1096	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGTTTATTACTTATG	36603449	True	NA	NA	False	AATAAA	-36	NA	36606610	36609299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36608328
transcript_74263.known	chr5	-	1714	2	FSM	ENSG00000250155.2	ENST00000659180.1	1714	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGGTATTCTCAACTT	-36725142	True	NA	NA	False	AATAAA	-2	NA	36725159	36704183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36705852_36725113
transcript_74264.known	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_16	35.7381988652406	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-37355407	True	NA	-6	True	AATAAA	-15	NA	37371106	37288136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_74268.known	chr5	+	2877	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	24.126827521006	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCTTTAGTGACTA	37374842	True	NA	NA	False	ATTAAA	-16	NA	37379317	37753435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
transcript_74275.nnic	chr5	+	463	5	NNC	ENSG00000082068.9	novel	1526	12	NA	NA	-18	11798	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	81.2507692271279	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTGGTCATTTGGAAGC	37374791	True	NA	NA	False	ATTAAA	-20	NA	37379266	37393607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37393541
transcript_74277.known	chr5	+	365	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCAAGGCGGGCA	37374826	True	NA	NA	False	NA	NA	NA	37379301	37381809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_37379393_37379488_37379555_37381601
transcript_74280.known	chr5	-	1762	8	FSM	ENSG00000164327.13	ENST00000513566.1	1762	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	5.0548017179869	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGGCTCTGTGTTTTGCT	-39071448	True	NA	NA	False	AATAAA	-11	NA	39074399	38980879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_74281.known	chr5	-	5497	5	FSM	ENSG00000113638.14	ENST00000337702.5	5497	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.93415824315276	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGTGGACATATGT	-40754982	True	NA	NA	False	AATAAA	-24	NA	40755961	40711575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_74283.known	chr5	-	784	4	FSM	ENSG00000113638.14	ENST00000511730.2	784	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.1347353938354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCATAGGATTAT	-40754970	True	NA	NA	False	NA	NA	NA	40755949	40716144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40716499_40730261_40730344_40746797_40747020_40755823
transcript_74286.known	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	51.8925765998648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	NA	False	NA	-8	True	AATAAA	-8	NA	40798374	40762769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
transcript_74289.known	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	104	junction_7	17.1496173426698	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	-40798187	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_74298.nic	chr5	-	1248	3	ISM	ENSG00000132356.12	ENST00000296800.4	1134	6	-46	6171	-31	2460	5prime_fragment	FALSE	canonical	3	104	junction_1	32	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCTGCCTGGAGAA	-40798209	False	NA	NA	False	NA	NA	NA	40798220	40774555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_40775504_40777444_40777587_40798062
transcript_74300.known	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	-40798148	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40777587_40798062
transcript_74303.known	chr5	-	505	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	5586.3196192922	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTGGTTTTGGTAA	-40714307	True	NA	-35	True	AATAAA	-19	NA	40835186	40832457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
transcript_74305.known	chr5	-	7573	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	0	0	0	multi-exon	FALSE	canonical	3	8653	junction_3	1841.34859998499	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTTTTGCAGCAAATT	-40714343	True	NA	NA	False	AATAAA	-18	NA	40835222	40825261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
transcript_74307.known	chr5	-	3294	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	14.5021550122732	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGACTGTCCTTT	-41866648	True	NA	-4	True	AATAAA	-18	NA	41870425	41730064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_74311.known	chr5	+	5246	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	15.8316139417306	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	41900159	True	NA	4	True	AATAAA	-15	NA	41904343	41921636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
transcript_74316.known	chr5	+	1655	7	FSM	ENSG00000151876.13	ENST00000281623.8	1655	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.57043640026736	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGGAATTGCATTTAA	41925175	True	NA	NA	False	AATAAA	-24	NA	41925280	41941743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41939440_41939617_41941191
transcript_74318.known	chr5	+	3493	9	FSM	ENSG00000198865.10	ENST00000361970.10	3493	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	20.0124960961895	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGTACTTTATTTGG	42754115	True	NA	6	True	ATTAAA	-17	NA	42756817	42802439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828_42796957_42799374_42799459_42799658
transcript_7432.known	chr1	-	868	8	FSM	ENSG00000143545.10	ENST00000495720.5	868	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	243.012555315186	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGACAACGGCAGAGG	-153973838	True	NA	-111	True	NA	NA	NA	153986358	153982060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986016
transcript_74322.known	chr5	-	1853	6	FSM	ENSG00000250722.6	ENST00000511224.5	1853	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.1193799239064	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCTAAAACTTGAG	-42811604	True	NA	NA	False	AATAAA	-34	NA	42811892	42800111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42809759_42809789_42811835
transcript_74323.known	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.1154583670684	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-42811604	True	NA	1	True	AATAAA	-24	NA	42811892	42799879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
transcript_74325.known	chr5	-	787	6	FSM	ENSG00000250722.6	ENST00000510965.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	75.6639940790863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAATCATGGACATCAG	-42811605	True	NA	NA	False	GATAAA	-41	NA	42811893	42801237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42810690_42810779_42811835
transcript_74326.known	chr5	-	799	3	FSM	ENSG00000250722.6	ENST00000506078.5	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	4.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGTATGTGTTTGT	-42811604	True	NA	NA	False	NA	NA	NA	42811892	42806582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42807109_42808150_42808367_42811835
transcript_74329.known	chr5	+	2599	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8661965096475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	43120474	True	NA	NA	False	NA	NA	NA	43120917	43175734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
transcript_7433.known	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	24.4114392723358	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	-153973819	True	NA	-22	True	ATTAAA	-20	NA	153986339	153981649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
transcript_74332.known	chr5	+	2400	8	FSM	ENSG00000172262.12	ENST00000306938.8	2400	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	51.6965241795316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	43119645	True	NA	NA	False	NA	NA	NA	43121539	43175719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_74334.known	chr5	+	3209	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	42.8652373308322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	43119701	True	NA	23	True	AGTAAA	-16	NA	43121595	43176324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_74337.known	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.3534727920748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	43120470	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_74346.known	chr5	+	1050	6	FSM	ENSG00000172262.12	ENST00000515326.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	45.561387160621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCGCATGGAAACAGC	43120869	False	NA	NA	False	AATAAA	-12	NA	43120882	43161773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708
transcript_74347.known	chr5	+	501	5	FSM	ENSG00000172262.12	ENST00000508259.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61.5589148702282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCACTGAGTCATTGC	43119638	True	NA	NA	False	AAAAAG	-22	NA	43121532	43161332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_74349.known	chr5	+	572	5	FSM	ENSG00000172262.12	ENST00000509341.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	55.1741560877917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	43119789	False	NA	NA	False	AAGAAA	-36	NA	43121683	43161294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121829_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_74350.nnic	chr5	+	1494	3	NNC	ENSG00000172262.12	novel	476	3	NA	NA	-588	0	intron_retention	FALSE	canonical	3	8	junction_2	5.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTCTCTAAGCGTCCT	43066850	False	NA	NA	False	TATAAA	-21	NA	43066992	43080503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_43067635_43067969_43068218_43079899
transcript_74351.nnic	chr5	+	1264	3	NNC	ENSG00000172262.12	novel	476	3	NA	NA	-588	55	intron_retention	FALSE	canonical	0	0	junction_2	9.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGGGCTTGGTGGGGG	43066850	False	NA	NA	False	AATACA	-15	NA	43066992	43099393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_43067635_43067969_43068218_43099019
transcript_74355.nic	chr5	+	2367	3	ISM	ENSG00000172262.12	ENST00000306938.8	2400	8	-361	50673	259	0	5prime_fragment	FALSE	canonical	3	18	junction_1	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	43121158	True	NA	NA	False	NA	NA	NA	43121178	43125046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_43121569_43122038_43122178_43123208
transcript_74358.nnic	chr5	+	1728	2	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-588	-11288	intron_retention	FALSE	canonical	3	19	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTTGGATATTT	43066850	False	NA	NA	False	ATTAAA	-18	NA	43066992	43069055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_43067635_43067969
transcript_74359.known	chr5	+	3340	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	29.4604254325471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	43119703	True	NA	16	True	AATAAA	-17	NA	43121597	43176247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_74361.known	chr5	-	646	3	FSM	ENSG00000177738.5	ENST00000503152.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	-43067309	True	NA	-1	True	GATAAA	-40	NA	43067452	43014730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43015151_43067086_43067158_43067297
transcript_74363.known	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	50.715283692394	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-43278085	True	NA	-5	True	AATAAA	-15	NA	43313412	43287469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
transcript_74368.known	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	38.4682007525151	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	-43313499	False	NA	-11	True	AATAAA	-20	NA	43313512	43289394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
transcript_74377.known	chr5	-	1518	3	FSM	ENSG00000151882.11	ENST00000513525.1	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTTATTTTTCTT	-43396982	True	NA	NA	False	NA	NA	NA	43397264	43380891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43382053_43388349_43388477_43397034
transcript_74381.nnic	chr5	-	2159	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	0	-91	intron_retention	FALSE	canonical	2	5	junction_3	27.9732014613987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTTTATATACTAT	-43482552	True	NA	-2	True	ATTAAA	-17	NA	43483891	43445328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_43446558_43453657_43454044_43476113_43476490_43479889_43479988_43483821
transcript_74383.known	chr5	-	1927	4	FSM	ENSG00000151881.15	ENST00000512085.5	1927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.6121078036982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGAAATTTGCTTTT	-43482552	True	NA	89	True	AATAAA	-1	NA	43483891	43445237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43446558_43453657_43454044_43454454_43454606_43483821
transcript_74384.known	chr5	-	736	4	FSM	ENSG00000151881.15	ENST00000506860.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.2593655651606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGGCTTTATGTAAT	-43482518	True	NA	NA	False	NA	NA	NA	43483857	43446341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43446558_43453657_43454044_43479889_43479988_43483821
transcript_74390.known	chr5	-	2736	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	10	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	-43482526	True	NA	NA	False	AATAAA	-35	NA	43483865	43444251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43446558_43453657_43454044_43483821
transcript_74395.known	chr5	-	2502	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	23.7327422679208	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	-43513455	True	NA	-9	True	AATAAA	-15	NA	43515148	43486708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_74398.nic	chr5	-	2293	12	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	16.3530268636514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	-43513477	True	NA	-9	True	AATAAA	-15	NA	43515170	43486708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43514805
transcript_74404.nic	chr5	-	1223	4	ISM	ENSG00000172244.9	ENST00000306862.7	2502	13	-29	19156	-29	-315	5prime_fragment	FALSE	canonical	0	0	junction_3	38.6120303647566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACATATAACTCAGAGTA	-43513484	True	NA	-10	True	AATAAA	-24	NA	43515177	43505864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_43506395_43508576_43508667_43509144_43509376_43514805
transcript_74406.known	chr5	-	1208	3	FSM	ENSG00000172244.9	ENST00000514462.1	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGACTCTACACTAGATA	-43513385	True	NA	NA	False	NA	NA	NA	43515078	43505549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43506395_43508576_43508667_43514805
transcript_74408.nic	chr5	-	2471	11	NIC	ENSG00000172239.14	novel	2780	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	344.958388794939	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	-43556348	False	NA	0	True	AATAAA	-25	NA	43556389	43526266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_74410.known	chr5	-	1734	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_10	241.632448152147	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	-43548146	True	NA	1	True	AATAAA	-37	NA	43557093	43527091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
transcript_74411.known	chr5	-	1814	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	354.449206516251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	NA	False	NA	0	True	AATAAA	-36	NA	43557695	43527092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
transcript_74412.nic	chr5	-	1645	11	NIC	ENSG00000172239.14	novel	1814	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	344.958388794939	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	-43556348	False	NA	0	True	AATAAA	-36	NA	43556389	43527092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_74418.nic	chr5	-	1593	11	NIC	ENSG00000172239.14	novel	2780	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	344.958388794939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGCTGCAATAAAATC	-43556348	False	NA	-52	True	NA	NA	NA	43556389	43527144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_74421.known	chr5	+	6483	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	25.9054621754089	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTACACATTATAT	43601931	True	NA	NA	False	AATAAA	-29	NA	43602722	43707405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_74424.known	chr5	-	557	2	FSM	ENSG00000248092.8	ENST00000515466.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	43603176	43575777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43575936_43602777
transcript_74427.known	chr5	-	692	5	FSM	ENSG00000251141.6	ENST00000505401.1	692	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	5.70087712549569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGCAAAACATCAAGAGAA	-44808363	True	NA	NA	False	NA	NA	NA	44808726	44777065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_44777329_44777908_44777993_44785048_44785182_44786825_44786953_44808641
transcript_74428.known	chr5	-	659	4	FSM	ENSG00000251141.6	ENST00000514597.5	659	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATTAACTATCTCA	-44808379	True	NA	NA	False	NA	NA	NA	44808742	44745008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_44745405_44745941_44746039_44777036_44777102_44808641
transcript_74431.known	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	-44808378	True	NA	NA	False	NA	NA	NA	44808741	44745137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_44745409_44745941_44746039_44808641
transcript_74433.known	chr5	-	220	2	FSM	ENSG00000251141.6	ENST00000505637.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	-44808373	True	NA	3	True	ATTAAA	-20	NA	44808736	44777203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_44777329_44808641
transcript_74434.known	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_3	34.662660024874	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	44800267	True	NA	12	True	AATAAA	-17	NA	44808946	44815514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
transcript_74437.known	chr5	+	2517	1	FSM	ENSG00000272335.1	ENST00000607056.1	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGTGTGTGTGTATG	44826065	False	NA	18	True	AATAAA	-25	NA	44826075	44828592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_44826100_44828600
transcript_74438.known	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	21.065003560408	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-50435550	True	NA	0	True	AATAAA	-25	NA	50441288	50396191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_74442.known	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	20.238418910577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	50666623	False	NA	NA	False	AATAAA	-19	NA	50666636	50846519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_74443.known	chr5	+	3825	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	22.1602888067823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATGTATA	50667470	False	NA	-22	True	NA	NA	NA	50667556	50843374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_74448.known	chr5	+	4371	3	FSM	ENSG00000152684.11	ENST00000274311.3	4371	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	81.5	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGTTATCAAGAAT	52787331	True	NA	NA	False	AATAAA	-25	NA	52787915	52804044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_52788415_52799884_52801121_52801408
transcript_74452.known	chr5	-	4166	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	78.9234861537848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106687	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
transcript_74453.known	chr5	-	3705	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	15.334239103682	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106687	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_74458.known	chr5	+	2367	3	FSM	ENSG00000247796.3	ENST00000502171.2	2367	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATATATTGTACTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	53109841	53115123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53110149_53112239_53113035_53113858
transcript_74459.known	chr5	+	1536	2	FSM	ENSG00000247796.3	ENST00000667672.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	53109721	True	NA	NA	False	AATAAA	-22	NA	53109880	53115126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53110149_53113858
transcript_74460.known	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	53109739	True	NA	NA	False	AATAAA	-22	NA	53109898	53115126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53110149_53112239
transcript_74463.known	chr5	+	3392	2	FSM	ENSG00000247796.3	ENST00000656188.1	3392	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTAATTTTATTCATT	53109684	True	NA	NA	False	TTTAAA	-14	NA	53109843	53115069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53110406_53112239
transcript_74467.known	chr5	+	833	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	560.428407559788	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552225	True	NA	25	True	AATAAA	-43	NA	53560646	53683338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
transcript_74473.known	chr5	+	669	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_4	71.0967650459569	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552217	True	NA	25	True	AATAAA	-43	NA	53560638	53683338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
transcript_74476.known	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	540.795915500683	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552253	True	NA	25	True	AATAAA	-43	NA	53560674	53683338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
transcript_74478.known	chr5	-	3328	5	FSM	ENSG00000185305.12	ENST00000504924.6	3328	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10.9630059746403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCAGACTAACTCCT	-54309043	True	NA	-30	True	AATAAA	-16	NA	54310573	53883941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53886714_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_74479.known	chr5	-	578	5	FSM	ENSG00000185305.12	ENST00000507646.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.3681564785033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGGTAGAAGAT	-54309046	True	NA	NA	False	NA	NA	NA	54310576	53887364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53887384_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_7448.known	chr1	-	1273	5	FSM	ENSG00000143543.15	ENST00000271843.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_3	17.7200451466693	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-153965154	False	12520	-2	True	AATAAA	-21	NA	153977674	153974268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169
transcript_74484.known	chr5	+	3422	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	70.153799295231	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156511	True	NA	NA	False	AAAAAG	-22	NA	55160167	55167071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
transcript_74488.known	chr5	+	3731	3	FSM	ENSG00000164294.14	ENST00000503787.6	3731	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	9	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	55156514	True	NA	6	True	AATAAA	-18	NA	55160170	55167297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160397_55160993_55161256_55164054
transcript_7449.known	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	899.004758360909	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	-153963427	False	NA	-12	True	AATAAA	-15	NA	153963462	153959110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
transcript_74490.known	chr5	+	1036	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	91	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	55156513	True	NA	34	True	AATAAA	-45	NA	55160169	55164754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160244_55160993_55161256_55164054
transcript_74495.nic	chr5	-	1120	8	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-28	33116	-28	6079	5prime_fragment	FALSE	canonical	3	245	junction_6	22.821400625961	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGAAAAAGCCTCCTG	-55303227	True	NA	-95	True	NA	NA	NA	55307722	55289364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_74497.nic	chr5	-	800	5	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-28	39130	-28	65	5prime_fragment	FALSE	canonical	3	245	junction_3	28.1602556806574	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGAGAATTAAGCAT	-55303227	True	NA	-2	True	AAAACA	-31	NA	55307722	55295378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_74498.known	chr5	-	4450	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7841348844192	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-55303179	True	NA	-3	True	AATAAA	-17	NA	55307674	55256245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285856_55289263_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_7450.known	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	885.341867428748	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153944724	True	NA	0	True	AATAAA	-27	NA	153963492	153959098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
transcript_74500.known	chr5	+	3961	27	FSM	ENSG00000039123.16	ENST00000230640.10	3961	27	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_10	68.86171934052	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATTAGTTTTTTCA	55303789	True	NA	13	True	AATAAA	-14	NA	55307988	55425579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55308148_55322326_55322465_55324131_55324199_55327715_55327779_55328698_55328812_55340009_55340185_55341680_55341772_55343330_55343456_55344521_55344621_55345093_55345197_55347012_55347145_55349572_55349653_55350918_55351030_55353167_55353270_55358572_55358699_55366724_55366876_55378313_55378487_55379126_55379196_55387973_55388103_55397415_55397527_55400232_55400422_55405424_55405589_55410523_55410630_55414181_55414239_55415969_55416133_55422877_55422983_55424719
transcript_74506.known	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	65.092549496851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528535	True	NA	-5	True	ATTAAA	-19	NA	55534964	55424853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
transcript_74507.known	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	159.516018004462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528540	True	NA	-5	True	ATTAAA	-19	NA	55534969	55424853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
transcript_74511.nic	chr5	-	1178	5	NIC	ENSG00000067113.17	novel	1542	6	NA	NA	199	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_4	109.474597510107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528323	False	NA	-5	True	ATTAAA	-19	NA	55534752	55424853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_74512.nic	chr5	-	1102	5	NIC	ENSG00000067113.17	novel	1542	6	NA	NA	199	-76	combination_of_known_junctions	FALSE	canonical	3	100	junction_4	109.474597510107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATGTAATATGCTTTC	-55528323	False	NA	-24	True	ATTAAA	-24	NA	55534752	55424929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_74515.nic	chr5	-	2797	18	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_15	48.5772669574144	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709457	True	NA	0	True	AATAAA	-29	NA	55712327	55625844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
transcript_74521.nic	chr5	-	2641	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	37.3609400811864	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709457	True	NA	0	True	AATAAA	-29	NA	55712327	55625844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
transcript_74528.known	chr5	-	2522	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	23.3660722701385	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-55709454	True	NA	-3	True	AATAAA	-26	NA	55712324	55625847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_7453.known	chr1	-	2038	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_3	311.182690178401	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153944769	True	NA	-11	True	AATAAA	-16	NA	153963537	153959109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
transcript_74534.known	chr5	-	2370	15	FSM	ENSG00000177058.12	ENST00000508124.5	2370	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	42.7813615720583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCTAACTCCTCT	-55709445	True	NA	-13	True	AATAAA	-16	NA	55712315	55625857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55697845_55697993_55711451_55711500_55712216
transcript_74537.nnic	chr5	-	2333	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_6	35.0136999426434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709457	True	NA	0	True	AATAAA	-29	NA	55712327	55625844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_74541.nnic	chr5	-	2225	14	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	44.4092052934175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709457	True	NA	0	True	AATAAA	-29	NA	55712327	55625844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_7455.known	chr1	-	1216	4	FSM	ENSG00000143543.15	ENST00000368589.5	1216	4	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	4.32049379893857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	-153965140	False	12520	-16	True	AATAAA	-15	NA	153977660	153974511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169
transcript_74550.nic	chr5	-	1153	8	ISM	ENSG00000177058.12	ENST00000396865.7	2522	16	-3	38582	2	130	5prime_fragment	FALSE	canonical	3	97	junction_6	26.0258897787474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCTTTTAAGTTTGTTT	-55709457	True	NA	NA	False	AATAAA	-18	NA	55712327	55664429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_74551.nic	chr5	-	1023	8	ISM	ENSG00000177058.12	ENST00000396865.7	2522	16	-3	38712	2	0	5prime_fragment	FALSE	canonical	3	97	junction_6	26.0258897787474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTCAGTTGGCTTT	-55709457	True	NA	NA	False	AATAAA	-33	NA	55712327	55664559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_74554.known	chr5	-	290	3	FSM	ENSG00000177058.12	ENST00000507216.1	290	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	53	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCTACAATATGTTTAT	-55709428	True	NA	NA	False	AATAAA	-25	NA	55712298	55704274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55704435_55711451_55711500_55712216
transcript_74555.known	chr5	+	2289	2	FSM	ENSG00000227908.4	ENST00000500093.2	2289	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCATCTCACTCTCCT	55995092	True	NA	NA	False	AATAAA	-33	NA	55995166	56003649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55995555_56001748
transcript_74556.known	chr5	-	438	1	FSM	ENSG00000226221.1	ENST00000450941.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	-56505060	False	NA	NA	False	AATACA	-33	NA	56505072	56504634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56504600_56505100
transcript_74557.known	chr5	-	619	4	FSM	ENSG00000237705.1	ENST00000415589.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGGTTTTCTGGCTGT	-56862154	True	NA	NA	False	AATAAA	-23	NA	56862164	56842015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56842214_56851989_56852075_56859668_56859914_56862073
transcript_74558.known	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	13.390502438503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-56950658	True	NA	-6	True	AATAAA	-16	NA	56952125	56919602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_74559.known	chr5	-	5199	13	FSM	ENSG00000155545.20	ENST00000381199.8	5199	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	13.5920217611493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-56950656	True	NA	-6	True	AATAAA	-16	NA	56952123	56919602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928862_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_74562.known	chr5	+	1396	6	FSM	ENSG00000155542.12	ENST00000285947.5	1396	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	12.7687117596099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	56909292	True	NA	NA	False	AGTAAA	-29	NA	56909595	56917348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56909744_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_74569.nic	chr5	+	1115	6	NIC	ENSG00000155542.12	novel	786	5	NA	NA	7	-163	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	21.3391658693586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAATTTTTCTTTTGTTT	56909809	True	NA	NA	False	ATTAAA	-27	NA	56910066	56917185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_56910395_56911041_56911112_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_7457.known	chr1	-	2022	3	FSM	ENSG00000143570.19	ENST00000537590.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	630.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153963606	False	NA	0	True	AATAAA	-27	NA	153963641	153959098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962528_153962748_153963494
transcript_74570.known	chr5	+	1009	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.7062792408487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	56909311	True	NA	NA	False	AGTAAA	-29	NA	56909614	56917348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_74576.known	chr5	+	571	2	FSM	ENSG00000155542.12	ENST00000498322.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTTCAGTAACATACC	56909289	True	NA	NA	False	GATAAA	-1	NA	56909592	56911588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56909744_56911168
transcript_7458.known	chr1	-	1353	8	FSM	ENSG00000143545.10	ENST00000614713.4	1353	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	243.709093898811	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTCTCCACTCAAATC	-153972846	False	NA	11	True	NA	NA	NA	153985366	153981616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153984983
transcript_74588.nnic	chr5	+	2900	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	1	98	junction_4	322.211746716693	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173812	57263085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_7459.known	chr1	-	2723	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	0	0	0	multi-exon	FALSE	canonical	3	1921	junction_2	37	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153963440	False	NA	-11	True	AATAAA	-16	NA	153963475	153959109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528
transcript_74590.nnic	chr5	+	2939	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	1	229	junction_7	287.939651759801	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173812	57263085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_74596.nic	chr5	+	3156	13	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	1	98	junction_4	311.813902387662	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57171464	True	NA	20	True	AATAAA	-23	NA	57173841	57263085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_74600.known	chr5	+	4683	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	0	0	0	0	multi-exon	FALSE	canonical	1	229	junction_7	275.202185775396	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATTCTATGCATTAAG	57173801	False	NA	15	True	TATAAA	-21	NA	57173947	57264679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_74605.nnic	chr5	+	2879	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	1	305	junction_1	234.508312774474	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173812	57263085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_74606.nnic	chr5	+	3381	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	1	305	junction_1	234.508312774474	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	NA	False	NA	21	True	AATAAA	-17	NA	57173812	57263587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_7461.known	chr1	+	467	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	14528.4959884876	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	153902405	True	NA	16	True	AATAAA	-16	NA	153990762	153992150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
transcript_74610.known	chr5	+	4506	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	0	0	0	0	multi-exon	FALSE	canonical	1	328	junction_10	212.2543305246	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	57166235	True	NA	9	True	TATAAA	-15	NA	57174058	57264673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_74618.known	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_2	299.252000828733	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	57173902	False	NA	21	True	AATAAA	-17	NA	57174048	57263587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_74627.known	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	18.9202624548643	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-58456901	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
transcript_74636.nic	chr5	+	1140	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	27.7623846238035	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATCTTAAATTTATAAG	NA	False	NA	-37	True	NA	NA	NA	58582110	58851527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_74637.nic	chr5	+	1268	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-186	52	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	27.7623846238035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTGTTATTTATTTG	NA	False	NA	15	True	TATAAA	-16	NA	58582034	58851579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_74638.nic	chr5	+	1514	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-62	422	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	27.7623846238035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGAAATGTTGTTTTT	58581544	True	NA	11	True	TATAAA	-1	NA	58582158	58851949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_74639.known	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	18.411952639522	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	58582376	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_74648.nnic	chr5	-	2572	12	NNC	ENSG00000035499.13	novel	2504	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	196.949169093478	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	-60691619	True	NA	-2	True	AATAAA	-23	NA	60700167	60596911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60695238_60695306_60700045
transcript_74649.known	chr5	-	2504	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	32.9028874112896	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	-60691618	True	NA	-2	True	AATAAA	-23	NA	60700166	60596911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_74651.known	chr5	-	1569	10	FSM	ENSG00000035499.13	ENST00000453022.6	1569	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	160.758003851967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGCCTTAGTTTTTA	-60691586	True	NA	-19	True	CATAAA	-24	NA	60700134	60597628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60597915_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_74654.known	chr5	+	970	2	FSM	ENSG00000287434.1	ENST00000664253.1	970	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGACTTCACTCTCTTG	NA	False	NA	-66	True	AATAAA	-22	NA	60699728	60702010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60700342_60701653
transcript_74656.nnic	chr5	-	1173	8	NNC	ENSG00000164181.14	novel	730	8	NA	NA	14	1154	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11.7525507435446	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATAGTCTCAGTGGTGT	-60843151	True	NA	NA	False	ATTAAA	-2	NA	60844196	60763075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_60763628_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
transcript_74657.known	chr5	-	3827	8	FSM	ENSG00000164181.14	ENST00000425382.5	3827	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	11.084094137869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTGTGTATATTTTTCA	-60843229	True	NA	-2	True	AATAAA	-18	NA	60844274	60751791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60844159
transcript_74659.known	chr5	-	2095	13	FSM	ENSG00000049167.16	ENST00000643034.1	2095	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	43.9686599244912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-60943302	True	NA	-1	True	AATAAA	-19	NA	60945064	60873832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924357_60928863_60928960_60944931
transcript_74663.known	chr5	-	2091	13	FSM	ENSG00000049167.16	ENST00000675042.2	2091	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	43.6297553918831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACACGTGATTATCAT	-60943311	True	NA	10	True	AATAAA	-30	NA	60945073	60873821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60932106_60932149_60944931
transcript_74664.known	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_2	17.2564516621159	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-60943308	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_74669.known	chr5	-	3672	11	FSM	ENSG00000049167.16	ENST00000682217.1	3672	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.0826048261883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCGTCTCTAAATAAA	-60943308	True	NA	NA	False	NA	NA	NA	60945070	60871997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_7467.known	chr1	+	352	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	3	23887	junction_3	4279.67226159512	19801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	153902404	True	NA	21	True	AATAAA	-21	NA	153990761	153992155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
transcript_74671.known	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14.1978958621896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	-60943268	True	NA	NA	False	AATGAA	-3	NA	60945030	60890703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_74674.known	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	10.2449987798926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	-60943289	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_74676.known	chr5	-	1073	5	FSM	ENSG00000049167.16	ENST00000682418.1	1073	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	52.8695328142778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTAGTTTCAGAGCC	-60943302	True	NA	NA	False	NA	NA	NA	60945064	60909339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60909958_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_74677.known	chr5	-	752	4	FSM	ENSG00000049167.16	ENST00000477893.1	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	10.3387082795139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATATAGTAAATGCTCAAAA	-60943297	True	NA	NA	False	ATTAAA	-39	NA	60945059	60917962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60918389_60922053_60922156_60928863_60928960_60944931
transcript_74678.known	chr5	-	2236	13	FSM	ENSG00000049167.16	ENST00000381118.7	2236	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	43.7832413398348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCAACCCACACGT	-60943289	True	NA	1	True	AATAAA	-21	NA	60945051	60873830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924509_60928863_60928960_60944931
transcript_74681.known	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_2	37.2051370407666	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60933894	True	NA	19	True	AATAAA	-16	NA	60945204	61153026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
transcript_74682.known	chr5	+	2211	4	FSM	ENSG00000164182.12	ENST00000678452.1	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	308.805224480848	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGTGTCTTTATAGTA	60933866	True	NA	NA	False	AATAAA	-8	NA	60945176	61154531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945429_61073124_61073215_61098991_61099033_61152703
transcript_74683.known	chr5	+	461	3	FSM	ENSG00000164182.12	ENST00000502658.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	383	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60934024	False	NA	19	True	AATAAA	-16	NA	60945334	61153026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945383_61073124_61073215_61152703
transcript_74686.known	chr5	+	586	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	389.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60933896	True	NA	19	True	AATAAA	-16	NA	60945206	61153026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945429_61098991_61099033_61152703
transcript_74688.known	chr5	-	584	4	FSM	ENSG00000188725.8	ENST00000507416.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	241.075829471881	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAATCATTTGGAAAAT	-61152505	True	NA	46	True	AAAAAG	-32	NA	61162468	61159921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_61160200_61161087_61161228_61162216_61162360_61162445
transcript_74690.known	chr5	-	2888	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	17.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTATCCATGATAAC	-61152505	True	NA	1	True	AATAAA	-26	NA	61162468	61157703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_61160200_61161087_61161228_61162216
transcript_74694.known	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	81.8851638296075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	62302366	True	NA	8	True	AATAAA	-19	NA	62306451	62391025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_74695.known	chr5	+	2539	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	35.7945042904092	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTCCTTCACCTGA	62305964	False	NA	-36	True	NA	NA	NA	62306161	62385676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_74698.known	chr5	-	1656	13	FSM	ENSG00000086189.11	ENST00000680960.1	1656	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	195.580048971145	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398169	True	NA	-23	True	AGTAAA	-17	NA	62403905	62388526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62399780_62399879_62402035_62402123_62403272_62403347_62403693
transcript_7470.known	chr1	+	573	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	13826.4394147188	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCCTGTTTATTGTCT	153902405	True	NA	11	True	AATAAA	-11	NA	153990762	153992145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
transcript_74700.known	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	150.00550954069	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
transcript_74701.known	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	467	junction_1	30.4375800777877	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-62398169	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_74706.known	chr5	-	1468	11	FSM	ENSG00000086189.11	ENST00000679751.1	1468	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	154.232324757166	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62403272_62403347_62403693
transcript_74708.known	chr5	-	1518	11	FSM	ENSG00000086189.11	ENST00000681672.1	1518	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	160.213264120047	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398193	True	NA	-23	True	AGTAAA	-17	NA	62403929	62388526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_74712.known	chr5	-	1208	11	FSM	ENSG00000086189.11	ENST00000506390.5	1208	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	159.399780426449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGAGCCTCAT	-62398162	True	NA	NA	False	AATAAA	-23	NA	62403898	62391716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62392007_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_74715.known	chr5	+	7901	21	FSM	ENSG00000068796.19	ENST00000674632.1	7901	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	149.536040806222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	62304367	True	NA	8	True	AATAAA	-19	NA	62306205	62391025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62372437_62372552_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_74722.known	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	26.7330574658873	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	62404123	True	NA	13	True	ATTAAA	-19	NA	62412762	62628582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
transcript_74744.known	chr5	-	6878	5	FSM	ENSG00000153006.16	ENST00000513458.9	6878	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	40.4745290275254	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGTGTCTTGCTTTG	-64764713	True	NA	-3	True	AATAAA	-42	NA	64768691	64718147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64768504
transcript_74759.known	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	84.8384084925899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	64688989	True	NA	NA	False	AATGAA	-14	NA	64690531	64717963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
transcript_74760.known	chr5	+	846	4	FSM	ENSG00000145642.12	ENST00000509189.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	63.5627424063989	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTGTAATATTGCTTTT	64688899	True	NA	19	True	AATAAA	-21	NA	64690441	64718090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64690815_64694086_64694200_64695506_64695665_64717888
transcript_74769.known	chr5	-	816	4	FSM	ENSG00000153006.16	ENST00000495198.6	816	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	45.38232646698	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCTGAGGTGAGAGG	-64764641	True	NA	NA	False	AAGAAA	-44	NA	64768619	64727670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_64728180_64741056_64741201_64754314_64754363_64768504
transcript_74772.known	chr5	-	392	4	FSM	ENSG00000153006.16	ENST00000510616.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	170.184866803394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	-64764649	True	NA	NA	False	AATAAA	-23	NA	64768627	64741056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_64741201_64754314_64754363_64765044_64765122_64768504
transcript_74773.known	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	31	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	64688960	True	NA	119	True	ATTAAA	-16	NA	64690502	64718190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64690815_64695506_64695665_64717888
transcript_74774.known	chr5	+	532	3	FSM	ENSG00000145642.12	ENST00000513930.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	92.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	64691255	False	NA	11	True	AATAAA	-13	NA	64691318	64718082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64691499_64695506_64695665_64717888
transcript_74776.nic	chr5	-	411	3	ISM	ENSG00000153006.16	ENST00000495198.6	816	4	-104	13386	-32	0	5prime_fragment	FALSE	canonical	3	278	junction_2	53	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	64768723	64741056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_64741201_64754314_64754363_64768504
transcript_74782.known	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	54.634666152198	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	64763152	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
transcript_74788.nnic	chr5	+	1800	13	FSM	ENSG00000153015.17	ENST00000691921.1	1952	13	0	152	0	-16	multi-exon	FALSE	canonical	3	39	junction_12	145.29765903903	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCAGACTGCAAGCCT	64763152	True	NA	25	True	AATAAA	-29	NA	64768929	65018589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_65018158
transcript_74791.known	chr5	+	2103	11	FSM	ENSG00000153015.17	ENST00000508024.2	3867	11	28	1736	0	22	multi-exon	FALSE	canonical	2	3	junction_10	168.895707464696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTCTCCTCTGGATCT	64763168	True	NA	4	True	AATAAA	-16	NA	64768945	64808562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64807598
transcript_74793.nic	chr5	+	1223	11	ISM	ENSG00000153015.17	ENST00000692763.1	7794	12	-18	14993	2	-14993	5prime_fragment	FALSE	canonical	3	399	junction_6	57.3697655564322	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAAAATGCAGCAAAACA	64763148	True	NA	NA	False	ATTAAA	-32	NA	64768925	64885506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442
transcript_74795.nic	chr5	+	1290	10	ISM	ENSG00000153015.17	ENST00000485990.2	1181	12	2353	0	-197	0	3prime_fragment	FALSE	canonical	3	399	junction_6	60.2398498186445	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGGACACAAGTGC	NA	False	NA	23	True	NA	NA	NA	64768720	64804312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228
transcript_74814.known	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	92.7028047040649	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	-65560025	True	NA	-60	True	NA	NA	NA	65563125	65517819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
transcript_74821.known	chr5	-	1731	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	0	0	0	multi-exon	TRUE	canonical	3	183	junction_9	50.0260931914536	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560068	True	NA	-6	True	AATAAA	-21	NA	65563168	65517765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_74823.known	chr5	-	1697	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	83.1724112912449	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560068	True	NA	-6	True	AATAAA	-21	NA	65563168	65517765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
transcript_74828.nnic	chr5	-	1605	10	NIC	ENSG00000123219.13	novel	1731	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	104.061354171944	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560092	True	NA	-6	True	AATAAA	-21	NA	65563192	65517765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561462_65561565_65563097
transcript_74829.nnic	chr5	-	1571	10	NIC	ENSG00000123219.13	novel	1697	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_8	105.937904010665	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560092	True	NA	-6	True	AATAAA	-21	NA	65563192	65517765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561496_65561565_65563097
transcript_74834.known	chr5	-	1040	10	FSM	ENSG00000123219.13	ENST00000510693.5	1040	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	106.889812885819	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTATTATTCATTTTT	-65560045	True	NA	NA	False	NA	NA	NA	65563145	65518334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_7484.known	chr1	-	1248	7	FSM	ENSG00000143549.21	ENST00000509409.5	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	1713.17545478824	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTGATTCCAGGA	-154080907	True	NA	NA	False	NA	NA	NA	154183227	154157111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154182987
transcript_7486.known	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_2	219.329125530839	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-154080869	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_74860.known	chr5	-	634	2	FSM	ENSG00000123219.13	ENST00000504508.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATTTAAACCTGTAT	-65560036	True	NA	NA	False	TTTAAA	-6	NA	65563136	65560969	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65561565_65563097
transcript_74862.known	chr5	-	1576	9	FSM	ENSG00000123219.13	ENST00000242872.7	1576	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_6	11.3074919854051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAGTGATGTGGGAT	-65551865	False	NA	-7	True	AATAAA	-20	NA	65554965	65517766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796
transcript_74866.known	chr5	+	2019	12	FSM	ENSG00000113593.12	ENST00000510930.5	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	159.183920862495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATACAATATTAA	65558234	True	NA	-81	True	AGTAAA	-26	NA	65563295	65587422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_7487.known	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	1627.94645903033	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	-154183111	False	NA	2	True	AATAAA	-17	NA	154183130	154158608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_74870.known	chr5	+	2109	11	FSM	ENSG00000113593.12	ENST00000261308.10	2109	11	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	69.0189104521362	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	65558234	True	NA	26	True	ATTAAA	-20	NA	65563295	65587549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65563507_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_74879.known	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	60.165512454303	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	65708513	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_74881.known	chr5	+	1437	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	41.6842462914815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	65623833	True	NA	6	True	ATTAAA	-16	NA	65625033	65664764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_74884.known	chr5	+	2910	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	38.3525314244923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	65623826	True	NA	122	True	AGTAAA	-18	NA	65625026	65666233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_74889.known	chr5	+	1410	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	28.9430903557109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTATCTTGTAATT	65623844	True	NA	8	True	ATTAAA	-18	NA	65625044	65664766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_74892.known	chr5	+	2715	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	21.3382828280437	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	65623839	True	NA	6	True	AATAAA	-18	NA	65625039	65666069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_74898.known	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	8.15107354892593	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-65622998	True	NA	-18	True	AATAAA	-13	NA	65624333	65589689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_74903.known	chr5	-	5448	11	FSM	ENSG00000197860.10	ENST00000381007.9	5448	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.0774289116882	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATTTGATTTAATG	-65718972	True	NA	0	True	AATAAA	-23	NA	65722109	65665927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_74908.nic	chr5	+	981	4	ISM	ENSG00000113597.18	ENST00000508304.5	729	7	-333	14600	-268	-14600	5prime_fragment	FALSE	canonical	3	137	junction_3	14.1656862405839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGGTTTTTTTATA	65624692	False	NA	NA	False	NA	NA	NA	65624735	65638136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695
transcript_74909.known	chr5	+	1541	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTAGTGCTAATTAT	65623826	True	NA	NA	False	AATACA	-17	NA	65625026	65630928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65629467
transcript_7491.known	chr1	-	1861	8	FSM	ENSG00000143612.21	ENST00000470180.2	1861	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	373.830257235138	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGTTGTCTTTTAAT	-154209581	True	NA	-4	True	AATAAA	-36	NA	154220637	154206705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213181_154213304_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_74910.known	chr5	+	2047	13	FSM	ENSG00000153914.16	ENST00000522912.5	2047	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	71.98664035006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGTATAGGACCGACAA	66138878	True	NA	NA	False	AAGAAA	-19	NA	66144314	66178857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_66144538_66153462_66153597_66158808_66158933_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177516_66177659_66178718
transcript_74912.known	chr5	+	6699	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	22.0671402244593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	66138863	True	NA	19	True	AATAAA	-20	NA	66144299	66183615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
transcript_74921.nic	chr5	+	1517	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-88	12800	-6	0	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGGACAAAGAAAAGG	66138775	True	NA	-1	True	AAAAAG	-35	NA	66144211	66170815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_74922.nic	chr5	+	1576	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-88	12741	-6	59	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGGATAAAAAATCC	66138775	True	NA	-49	True	AAAAAG	-28	NA	66144211	66170874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_74926.known	chr5	+	2625	10	FSM	ENSG00000145675.15	ENST00000320694.12	2625	10	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	12.0185042515466	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTCAGAATTAAAACTA	NA	False	NA	NA	False	AGTAAA	-29	NA	68288367	68298583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_68288752_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_74943.known	chr5	+	2029	9	FSM	ENSG00000134057.15	ENST00000256442.10	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	5854	junction_6	208.77436235084	3826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	69115853	True	NA	16	True	AATAAA	-20	NA	69167149	69178245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238_69177350_69177523
transcript_7495.known	chr1	-	1678	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_6	226.214315786306	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209534	True	NA	-18	True	AATAAA	-22	NA	154220590	154206719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_7496.nnic	chr1	-	1637	7	NNC	ENSG00000143612.21	novel	1678	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_6	318.869182511505	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209570	True	NA	-18	True	AATAAA	-22	NA	154220626	154206719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220418
transcript_74967.known	chr5	+	1190	8	FSM	ENSG00000134057.15	ENST00000505500.5	1190	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	2103.6148285603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTTGAGTTGGA	69167151	False	NA	-45	True	NA	NA	NA	69167262	69177630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177523
transcript_74995.known	chr5	+	1354	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_3	94.5555392348857	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	69180062	True	NA	29	True	AATAAA	-15	NA	69189582	69210357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_74997.nnic	chr5	+	1364	8	NIC	ENSG00000153044.10	novel	1354	9	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_6	299.713877161644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	69180000	True	NA	29	True	AATAAA	-15	NA	69189520	69210357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69208195_69208360_69209706
transcript_74998.known	chr5	+	1305	8	FSM	ENSG00000153044.10	ENST00000515001.5	1305	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	262.180806906616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTTATTTTTTTTT	69180053	True	NA	28	True	AATAAA	-14	NA	69189573	69210356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_74999.known	chr5	+	692	8	FSM	ENSG00000153044.10	ENST00000502689.1	692	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	300.777495901566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTAGTTATTTGTAGT	69189706	False	NA	18	True	NA	NA	NA	69189741	69209929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_7500.known	chr1	-	1610	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	166.206377735633	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209568	True	NA	-18	True	AATAAA	-22	NA	154220624	154206719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_75003.known	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	97.6740611535234	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	69211887	True	NA	10	True	AATAAA	-20	NA	69217759	69230158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
transcript_75006.known	chr5	+	1200	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	475.766282491262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAGGAATAAAGATT	69211959	True	NA	NA	False	AAAAAG	-33	NA	69217831	69229875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
transcript_75009.known	chr5	+	298	3	FSM	ENSG00000134056.12	ENST00000507022.1	298	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTGTTTGTCATCAG	69211913	True	NA	-52	True	NA	NA	NA	69217785	69229231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69217872_69228199_69228388_69229207
transcript_75024.known	chr5	+	1426	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_4	36.3774973582514	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATATAGTATCACAAATC	69232769	True	NA	17	True	AATAAA	-30	NA	69234885	69277430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_7503.known	chr1	-	1163	6	FSM	ENSG00000143612.21	ENST00000368519.5	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	329.393017533766	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTAAAAATCTTCACT	-154209529	True	NA	NA	False	NA	NA	NA	154220585	154207175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154219835_154219938_154220341
transcript_75033.known	chr5	+	1164	11	FSM	ENSG00000134058.12	ENST00000514676.5	1164	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	203.822496304996	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	69232795	True	NA	19	True	AATAAA	-3	NA	69234911	69277305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_75042.known	chr5	+	261	2	FSM	ENSG00000134058.12	ENST00000512985.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTATTATTAATTGACT	69232766	True	NA	NA	False	AAGAAA	-43	NA	69234882	69235495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235042_69235393
transcript_75043.known	chr5	+	1455	11	FSM	ENSG00000134058.12	ENST00000502604.5	1455	11	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_3	37.1375820429925	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAAAGTTCAATACTC	69233000	False	NA	52	True	AATAAA	-36	NA	69235116	69277338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_75044.known	chr5	-	1735	13	FSM	ENSG00000183323.13	ENST00000511257.1	1735	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.13235875607248	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCCTGCCTCAGCCTC	-69331941	True	NA	NA	False	NA	NA	NA	69332793	69282476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69283035_69285336_69285468_69292187_69292363_69294792_69294901_69300011_69300128_69303846_69303930_69306816_69306903_69307950_69308029_69311117_69311205_69313984_69314044_69320236_69320346_69320464_69320581_69332764
transcript_75048.known	chr5	+	3054	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.1306411387144	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368044	True	NA	24	True	ATTAAA	-14	NA	69369817	69414801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_7505.known	chr1	-	1287	6	FSM	ENSG00000143612.21	ENST00000640799.1	1287	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	309.163128461335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGTGAGATGTCTTCC	-154209580	True	NA	NA	False	NA	NA	NA	154220636	154207097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_75051.known	chr5	+	2943	18	FSM	ENSG00000152942.19	ENST00000354312.7	2943	18	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	28.2243851475106	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368051	True	NA	24	True	ATTAAA	-14	NA	69369824	69414801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_75053.known	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	50.5581990174618	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	69368286	False	NA	22	True	ATTAAA	-12	NA	69370059	69414799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_75054.known	chr5	+	2323	17	FSM	ENSG00000152942.19	ENST00000521422.5	2323	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	55.8099453502689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAATATGCTTTTCTGA	69368046	True	NA	NA	False	NA	NA	NA	69369819	69414360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69371034_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_7506.known	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_5	242.765236391045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	-154209477	True	NA	-3	True	AATAAA	-28	NA	154220533	154211733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_75063.known	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	467.216759117222	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-69353052	True	NA	0	True	TATAAA	-16	NA	69369520	69350983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
transcript_75064.known	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	340.898078610015	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	-69369955	True	NA	-7	True	AATAAA	-17	NA	69370013	69351725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
transcript_75071.known	chr5	-	587	4	FSM	ENSG00000085231.14	ENST00000512561.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	382.708766557548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTTCTTTTTCTC	-69353052	True	NA	NA	False	ATTAAA	-42	NA	69369520	69351929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69369462
transcript_75088.known	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	24	junction_2	758.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	-69352997	True	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69368824
transcript_75090.known	chr5	-	761	3	FSM	ENSG00000273841.6	ENST00000509462.6	1057	3	0	296	0	-296	multi-exon	FALSE	canonical	3	23	junction_2	759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACCATGTCTGTTTCA	-69369258	False	NA	NA	False	NA	NA	NA	69369316	69365238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369164
transcript_75091.known	chr5	-	582	3	FSM	ENSG00000273841.6	ENST00000512152.6	996	3	0	414	0	-414	multi-exon	FALSE	canonical	3	46	junction_2	747.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAATCTTTACAGAA	-69353009	True	NA	NA	False	NA	NA	NA	69369477	69365356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369386
transcript_75092.known	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1541	junction_1	187.5	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-69353052	True	NA	-6	True	AATAAA	-17	NA	69369520	69364742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369462
transcript_75093.known	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	740.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	-69369955	True	NA	-7	True	AATAAA	-16	NA	69370013	69364743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369656
transcript_75095.known	chr5	+	2789	17	FSM	ENSG00000152942.19	ENST00000345306.10	2789	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	59.741336976586	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368068	True	NA	24	True	ATTAAA	-14	NA	69369841	69414801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_75096.known	chr5	+	6438	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	101.600935035067	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	NA	False	NA	9	True	NA	NA	NA	69492291	69558104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_75097.nic	chr5	+	1448	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	0	47	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	176.036384289584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	69556814	True	NA	NA	False	AATAAA	-39	NA	69560208	69592293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75099.nic	chr5	+	1820	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	-122	279	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	176.036384289584	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	69560058	False	NA	NA	False	ATTAAA	-14	NA	69560068	69592525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75102.known	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	171.875852270614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	69556796	True	NA	NA	False	AATAAA	-24	NA	69560190	69595221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75106.nic	chr5	+	1394	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-26	47	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	149.926589443708	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	69556770	True	NA	NA	False	AATAAA	-39	NA	69560164	69592293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75107.nic	chr5	+	1626	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-26	279	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	149.926589443708	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	69556770	True	NA	NA	False	ATTAAA	-14	NA	69560164	69592525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75110.known	chr5	+	2952	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	136.807504667446	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	69556847	True	NA	NA	False	NA	NA	NA	69560241	69593767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75127.known	chr5	+	1956	15	FSM	ENSG00000183474.16	ENST00000446221.6	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	158.633723285011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	69556899	False	NA	NA	False	NA	NA	NA	69560293	69592860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_7514.known	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	351.848244986386	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209563	True	NA	-18	True	AATAAA	-22	NA	154220619	154206719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
transcript_75147.known	chr5	+	569	3	FSM	ENSG00000205572.10	ENST00000503931.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1008.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGTGACCCTGCAA	NA	False	NA	NA	False	AGTAAA	-13	NA	70025355	70030122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025459_70026406_70026516_70029765
transcript_75148.known	chr5	+	703	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	2021	junction_1	96	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025246	70032696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025459_70026406_70026516_70032314
transcript_75150.known	chr5	+	1907	3	FSM	ENSG00000205572.10	ENST00000380750.8	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	987.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70025250	70043113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025459_70026406_70026516_70041523
transcript_75151.known	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_1	987	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70025586	70032493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025732_70026406_70026516_70032314
transcript_75165.known	chr5	+	1550	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	878.118585385824	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049656	70077596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
transcript_75166.known	chr5	+	1482	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_7	617.461625831922	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70049668	70077595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
transcript_7517.known	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_4	185.347477727645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	-154209572	True	NA	77	True	NA	NA	NA	154220628	154212132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_75174.known	chr5	+	900	8	FSM	ENSG00000205571.14	ENST00000380741.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_7	538.123648638944	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	NA	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_75175.known	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	534.89911312741	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
transcript_75176.known	chr5	+	1388	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	852.118656104672	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049663	70077592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
transcript_75179.known	chr5	+	804	7	FSM	ENSG00000205571.14	ENST00000614240.4	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	867.827827906486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	NA	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520
transcript_75181.known	chr5	+	867	7	FSM	ENSG00000205571.14	ENST00000511812.5	867	7	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	852.387235943852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAATTTTGATGCCAA	NA	False	NA	NA	False	AAAAAG	-45	NA	70049637	70076706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_75192.nnic	chr5	-	1547	11	Fusion	ENSG00000253816.3_ENSG00000254701.3	novel	584	4	NA	NA	-31386	57691	multi-exon	FALSE	canonical	2	7	junction_3	32.7102430440374	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	NA	False	NA	NA	False	NA	NA	NA	70290316	70139563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_70139721_70142330_70142446_70197254_70197391_70201867_70202043_70203880_70203966_70207557_70207746_70219917_70220093_70221930_70222016_70258881_70259038_70260503_70260538_70290075
transcript_75201.known	chr5	+	1432	16	FSM	ENSG00000226259.10	ENST00000508065.7	1432	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	162.586455633781	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAATTCAGTAGTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	70415351	70447526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70415390_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_75205.nnic	chr5	+	1519	16	NNC	ENSG00000226259.10	novel	1432	16	NA	NA	18	-653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	166.995675260036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTCTCTTTTTAATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	70415369	70446873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_70415551_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70446636
transcript_75207.nic	chr5	+	1729	16	NIC	ENSG00000226259.10	novel	1432	16	NA	NA	18	154	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	159.608214770488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	70415369	70447680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_70415551_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_75215.known	chr5	+	1954	15	FSM	ENSG00000226259.10	ENST00000513202.5	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	158.921299994169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	NA	False	NA	NA	False	NA	NA	NA	70415442	70448015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70415551_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_75218.nnic	chr5	-	1557	7	NNC	ENSG00000196302.5	novel	418	4	NA	NA	-30598	35521	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	10.3869576339219	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCTCAAGAAACAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	70585864	70480865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_70481539_70516307_70516483_70518320_70518406_70522000_70522189_70555217_70555374_70556839_70556874_70585618
transcript_75222.known	chr5	+	699	3	FSM	ENSG00000172058.16	ENST00000317633.14	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_1	95.5	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900668	70908115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70900877_70901824_70901934_70907733
transcript_75224.known	chr5	+	663	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	0	0	0	0	multi-exon	TRUE	canonical	3	253	junction_1	980.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900977	70908115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70901150_70901824_70901934_70907733
transcript_75241.known	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_7	403.48727907457	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70925086	70953015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
transcript_75245.known	chr5	+	900	8	FSM	ENSG00000172062.17	ENST00000351205.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_7	354.164956378423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	NA	False	NA	NA	False	AAAAAG	-45	NA	70925103	70952006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940
transcript_75246.known	chr5	+	1445	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_7	544.190542860472	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATATTATTTTGCCCT	NA	False	NA	NA	False	TTTAAA	-29	NA	70925094	70953040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
transcript_75254.known	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	202.49934413474	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71067650	71035075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
transcript_75256.nnic	chr5	-	1747	17	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	206.011746858644	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTGTAAGAAGAAAGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	71067734	71035328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_75262.known	chr5	-	4336	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	189.061847611363	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTTA	NA	False	NA	NA	False	AATAAA	-24	NA	71067601	71032669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_75264.nic	chr5	-	1687	16	NIC	ENSG00000145736.14	novel	4336	16	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	193.967305377879	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTGTAAGAAGAAAGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	71067772	71035328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_75275.nic	chr5	-	1365	16	NIC	ENSG00000145736.14	novel	4336	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	193.967305377879	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	71067703	71035581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_75277.known	chr5	-	1953	15	FSM	ENSG00000145736.14	ENST00000519783.5	1953	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	189.325009398319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCCACTGCACTCCAC	NA	False	NA	NA	False	NA	NA	NA	71067601	71035015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061687_71061766_71062707_71062797_71067493
transcript_75294.nnic	chr5	-	1102	9	NIC	ENSG00000145736.14	novel	860	8	NA	NA	-144	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_8	229.577737378867	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067833	71055029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_75297.nic	chr5	-	1021	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	-15	6941	0	0	5prime_fragment	FALSE	canonical	3	230	junction_7	157.878666923013	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067689	71055029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_75299.known	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_7	176.981378012675	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067689	71055029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_75313.nic	chr5	+	1626	10	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-55	55908	-20	-21781	5prime_fragment	FALSE	canonical	3	22	junction_5	4.56503079648314	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAGAAAAGAAGGAGGA	NA	False	NA	26	True	NA	NA	NA	71455630	71489569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403
transcript_75315.nic	chr5	+	1459	9	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-55	58851	-20	-24724	5prime_fragment	FALSE	canonical	3	22	junction_5	4.84122918275927	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTGATTTTAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-28	NA	71455630	71486626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483
transcript_75317.nic	chr5	+	725	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-55	86633	-20	-52506	5prime_fragment	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGAAGGTAAGGGAG	NA	False	NA	23	True	AATATA	-42	NA	71455630	71458844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578
transcript_75318.known	chr5	+	3621	17	FSM	ENSG00000131844.17	ENST00000682727.1	3621	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	107.146639442168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	NA	False	NA	-30	True	AATAGA	-3	NA	71587295	71658668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71636103_71636168_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_75319.known	chr5	+	3624	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	0	0	0	0	multi-exon	FALSE	canonical	2	164	junction_12	49.0763117501713	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587339	71658706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_7532.known	chr1	+	3451	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_5	279.913525213095	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201100	True	NA	26	True	AATAAA	-23	NA	154220848	154263505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_75322.known	chr5	+	3574	16	FSM	ENSG00000131844.17	ENST00000683789.1	3574	16	0	0	0	0	multi-exon	FALSE	canonical	2	120	junction_6	65.7590213498413	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587275	71658706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_75324.known	chr5	+	2587	10	FSM	ENSG00000131844.17	ENST00000510895.7	2587	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	31.8297942574113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAGATAAAAAT	NA	False	NA	NA	False	AATAAA	-6	NA	71587302	71636711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150
transcript_75325.nic	chr5	+	2147	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-144	14264	97	-13	5prime_fragment	FALSE	canonical	3	89	junction_4	18.1848150939183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGGAGAAAGAAAAGC	72096115	True	NA	-48	True	AAAAAG	-27	NA	72107330	72195301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_75326.nic	chr5	+	2268	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-144	14143	97	0	5prime_fragment	FALSE	canonical	3	89	junction_4	18.1848150939183	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAGAAAAAAGAACC	72096115	True	NA	-39	True	AAAAAG	-37	NA	72107330	72195422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_75327.nic	chr5	+	2391	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-144	14020	97	105	5prime_fragment	FALSE	canonical	3	89	junction_4	18.1848150939183	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAAGAAGCTCCCTAA	72096115	True	NA	-79	True	AAAAAG	-22	NA	72107330	72195545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_75329.known	chr5	+	11790	7	FSM	ENSG00000131711.15	ENST00000296755.12	11790	7	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_6	31.4360020076062	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTGTGTGCTGTGCT	72096259	True	NA	17	True	AATAAA	-18	NA	72107474	72209565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865_72200368_72203562_72203802_72205083
transcript_75330.known	chr5	-	2641	6	FSM	ENSG00000285804.2	ENST00000649991.1	2641	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.748331477354788	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTCGTAATTTGTTA	-72107943	False	NA	NA	False	AATAAA	-22	NA	72108000	72095854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72097971_72098278_72098438_72098757_72098915_72100922_72100999_72103577_72103635_72107924
transcript_75331.known	chr5	-	1369	12	FSM	ENSG00000113048.17	ENST00000513900.5	1369	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	287.613520527257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACAGCCTCAGCTTCC	-72308736	True	NA	NA	False	NA	NA	NA	72320231	72220836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72241646_72241689_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_75332.known	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	47.3184953268804	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-72308745	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_75333.known	chr5	-	2628	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	226.464323901139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	-72308760	True	NA	-9	True	AATAAA	-14	NA	72320255	72219527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
transcript_75337.nnic	chr5	-	1587	5	NNC	ENSG00000113048.17	novel	504	4	NA	NA	-11	-18248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	338.965337460927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTCTTAGTTGTGCTT	-72308771	True	NA	NA	False	AATACA	-20	NA	72320266	72256322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_72257584_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_75338.known	chr5	-	486	5	FSM	ENSG00000113048.17	ENST00000520285.5	486	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	338.099467612713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGTCAGAATTGTAC	-72308696	True	NA	NA	False	AATAAA	-15	NA	72320191	72294553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72294789_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_7534.known	chr1	+	1151	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	247.433099824758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154266790	True	NA	27	True	AATAAA	-16	NA	154272608	154275873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_75342.known	chr5	+	2195	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	30.0958468895627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	72318493	True	NA	NA	False	NA	NA	NA	72320372	72360225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
transcript_75345.known	chr5	+	11145	10	FSM	ENSG00000049883.15	ENST00000380639.10	11145	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	11.4514541639538	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTCCTTGAATT	72318493	True	NA	3	True	AATAAA	-15	NA	72320372	72368395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_7535.known	chr1	+	1109	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_2	40.0277681394082	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	154266810	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_75352.nnic	chr5	+	1864	9	NIC	ENSG00000049883.15	novel	11145	10	NA	NA	-3	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	35.124777579367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTATAGTTTATCTTA	72318484	True	NA	0	True	AATAAA	-5	NA	72320363	72359219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72358202
transcript_75353.known	chr5	+	2029	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	34.4700957352892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	72318487	True	NA	NA	False	AATATA	-17	NA	72320366	72359352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_75356.known	chr5	+	1440	8	FSM	ENSG00000049883.15	ENST00000503315.5	1440	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.4216583117027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCATCTGCAAAACAAT	72318518	True	NA	NA	False	NA	NA	NA	72320397	72358912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_75357.known	chr5	+	8489	25	FSM	ENSG00000083312.19	ENST00000337273.10	8489	25	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	41.2697553704082	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	72813801	True	NA	10	True	AATAAA	-15	NA	72816660	72914388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_75360.known	chr5	+	3028	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	22.2573333732702	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATTCAGTCT	72836821	True	NA	25	True	NA	NA	NA	72848183	72908951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_75361.nic	chr5	+	2951	24	ISM	ENSG00000083312.19	ENST00000337273.10	8489	25	-7	8808	5	0	5prime_fragment	FALSE	canonical	3	36	junction_1	42.1432429940638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGCTTTAAATTTAAA	72813794	True	NA	40	True	AATAAA	-22	NA	72816653	72905580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
transcript_75363.known	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	46.7755368826658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	72836758	True	NA	-10	True	AATAGA	-31	NA	72848120	72914368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_75369.nic	chr5	+	432	4	ISM	ENSG00000083312.19	ENST00000520850.5	863	9	5	27181	5	0	5prime_fragment	FALSE	canonical	3	36	junction_1	87.3765796232988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGGTAAGTTATATTA	72813794	True	NA	NA	False	TTTAAA	-35	NA	72816653	72855916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773
transcript_75372.known	chr5	+	1244	4	FSM	ENSG00000157111.13	ENST00000454765.7	1244	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	73120450	True	NA	4	True	AATAAA	-14	NA	73120574	73131809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131537
transcript_75373.known	chr5	+	1247	4	FSM	ENSG00000157111.13	ENST00000287773.5	1247	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	9.80929264637478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	73120444	True	NA	4	True	AATAAA	-14	NA	73120568	73131809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131540
transcript_75374.known	chr5	-	2321	3	FSM	ENSG00000287090.1	ENST00000664281.1	2321	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGGTTGCTCTGAAT	-73201954	False	NA	NA	False	NA	NA	NA	73201973	73195313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73197334_73199114_73199260_73201817
transcript_75375.known	chr5	-	744	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTCTTAACCATGAA	-73498147	True	NA	-2	True	AATAAA	-21	NA	73498293	73497549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73497500_73498300
transcript_7538.known	chr1	+	914	7	FSM	ENSG00000143575.15	ENST00000457918.6	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	221.147512358205	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGCTTGGATATGTG	154266770	True	NA	-62	True	NA	NA	NA	154272588	154275784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273479_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_75381.known	chr5	+	1237	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	7	32	7	-32	multi-exon	FALSE	canonical	3	613	junction_1	2159.07133740412	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	73423304	True	NA	-26	True	ATTAAA	-26	NA	73498448	73505635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_75391.known	chr5	+	740	5	FSM	ENSG00000145741.17	ENST00000678135.1	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2635.04339385521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAGAAGCCTGGGAAT	73423291	True	NA	-29	True	NA	NA	NA	73498435	73505435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498559_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_75393.known	chr5	+	897	6	FSM	ENSG00000145741.17	ENST00000335895.12	897	6	0	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	269.894053287582	12670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	73423263	True	NA	31	True	AATAAA	-16	NA	73498407	73505495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_75394.known	chr5	+	1177	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	295.649285471824	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	73423297	True	NA	31	True	AATAAA	-16	NA	73498441	73505495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
transcript_75397.known	chr5	+	5096	13	FSM	ENSG00000164338.10	ENST00000296792.9	5096	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	11.1314743957044	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGAGAAACCATCTT	73562089	True	NA	15	True	AATAAA	-29	NA	73565742	73583380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73565913_73567261_73567435_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_754.known	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	14937	junction_8	1512.45105651294	40124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	-8636993	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
transcript_7540.known	chr1	+	1284	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	28.7012194862866	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	154266810	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_75405.nic	chr5	-	2094	9	NIC	ENSG00000164331.10	novel	2161	9	NA	NA	-37	-145	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	33.1426839589071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATACTACTTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	73565704	73552334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562579_73562986_73565131
transcript_75406.known	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	9.25253343684853	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-73564585	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_75407.nnic	chr5	-	1920	9	NNC	ENSG00000164331.10	novel	2161	9	NA	NA	-37	-145	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	37.9339475272479	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATACTACTTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	73565704	73552334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562753_73562986_73565131
transcript_75410.nnic	chr5	-	1672	8	NIC	ENSG00000164331.10	novel	2161	9	NA	NA	3	-145	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	40.9180365399626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATACTACTTTTTTA	-73565383	False	1054	-11	True	AATAAA	-20	NA	73565393	73552334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_75412.known	chr5	-	1298	4	FSM	ENSG00000164331.10	ENST00000515804.1	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	8.60232526704263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-73564613	True	NA	NA	False	AGTAAA	-1	NA	73565667	73557430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73557641_73561129_73561289_73562592_73562986_73565131
transcript_75414.known	chr5	-	573	2	FSM	ENSG00000164331.10	ENST00000509433.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATGATTTTCTGGA	-73565194	False	NA	-69	True	NA	NA	NA	73565204	73562485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73562986_73565131
transcript_75415.known	chr5	+	2057	12	FSM	ENSG00000164338.10	ENST00000509005.5	2057	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.7643729106999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAAGCCTCTTTCTTG	73562089	True	NA	-2	True	AAAACA	-10	NA	73565742	73580514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73565913_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_75417.known	chr5	-	2993	21	FSM	ENSG00000164347.18	ENST00000296805.8	2993	21	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_11	21.7146839719117	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	-74761993	True	NA	-3	True	AATAAA	-16	NA	74767117	74721205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_75418.known	chr5	-	2856	20	FSM	ENSG00000164347.18	ENST00000345239.6	2856	20	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_8	62.8801788921352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	-74761997	True	NA	-3	True	AATAAA	-16	NA	74767121	74721205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_7542.known	chr1	+	771	6	FSM	ENSG00000143575.15	ENST00000532105.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	267.263615181715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCAAACTGACCAATAAAA	154266849	True	NA	-7	True	NA	NA	NA	154272667	154275839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_75422.known	chr5	-	1870	15	FSM	ENSG00000164347.18	ENST00000427854.6	1870	15	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	21.4024841205551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTGGTCTTGTTT	-74762022	True	NA	NA	False	AATATA	-13	NA	74767146	74736668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_75428.known	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_12	54.583969461942	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-74865690	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_75433.known	chr5	+	4337	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	24.071559982685	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTTTTTTTCTTC	74761718	True	NA	NA	False	AATAAA	-16	NA	74767248	74780113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
transcript_75435.known	chr5	+	1199	5	FSM	ENSG00000164346.10	ENST00000296802.9	1199	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	204.822484117345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGCATTTGTGAGTG	NA	False	NA	20	True	AATATA	-19	NA	74766990	74776910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74776603
transcript_75436.known	chr5	+	645	3	FSM	ENSG00000164346.10	ENST00000514918.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	17.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATTAGAATG	74761717	True	NA	NA	False	AATAAA	-42	NA	74767247	74769554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213
transcript_75438.known	chr5	-	3047	22	FSM	ENSG00000164347.18	ENST00000509430.5	3047	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	80.9871073975719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTAATATCTTATTTTA	-74761981	True	NA	-5	True	AATAAA	-19	NA	74767105	74721257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74765034_74765153_74766937
transcript_75439.known	chr5	+	797	5	FSM	ENSG00000164346.10	ENST00000513356.1	797	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	215.611195210267	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACACTGTGAAACCC	74761732	True	NA	NA	False	NA	NA	NA	74767262	74771653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74771476
transcript_7544.known	chr1	-	3239	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	20.7020865829725	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGCTCTAATAAAATTA	-154556157	True	NA	-5	True	AATAAA	-13	NA	154558662	154548576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
transcript_75440.known	chr5	-	3154	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	13.5945761243225	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGAGTTTGACATTT	-75506898	True	NA	NA	False	TTTAAA	-6	NA	75511633	75373269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_75441.known	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	TRUE	canonical	3	584	junction_7	67.6738143771619	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	75325515	True	NA	76	True	AGTAAA	-25	NA	75337219	75362101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_75446.known	chr5	+	3681	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	160.337491283577	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	75325527	True	NA	NA	False	AATAAA	-26	NA	75337231	75361423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_75451.known	chr5	+	421	3	FSM	ENSG00000113161.17	ENST00000509431.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_1	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAAATCATGTATTT	75325541	True	NA	NA	False	AATAAA	-5	NA	75337245	75344030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852
transcript_75455.known	chr5	-	2185	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	8.49987846291331	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAACACTAAATCAT	-75715858	True	NA	NA	False	TATAAA	-14	NA	75717437	75674123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_75457.nic	chr5	-	1979	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	24.4793790770926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	-75715869	True	NA	NA	False	ATTAAA	-4	NA	75717448	75674201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75712853_75712952_75717305
transcript_75459.nic	chr5	-	1941	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	24.1900806116887	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	-75715869	True	NA	NA	False	ATTAAA	-4	NA	75717448	75674201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_75674579_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_7546.known	chr1	-	1438	2	FSM	ENSG00000286391.2	ENST00000659429.1	1438	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACACCTCCCAGTAC	-154567620	True	NA	NA	False	TTTAAA	-37	NA	154567748	154564934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154566183_154567558
transcript_75461.nnic	chr5	-	1667	10	NNC	ENSG00000152359.15	novel	896	7	NA	NA	0	3573	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	22.7107414625278	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTCTTTGCTGTCTGTA	-75715869	True	NA	NA	False	AATAAA	-21	NA	75717448	75686947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_75687329_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_75462.nic	chr5	-	1620	8	NIC	ENSG00000152359.15	novel	1984	11	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	29.5917804362589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75696216	75674201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75696044
transcript_75467.known	chr5	+	3727	2	FSM	ENSG00000181104.7	ENST00000319211.5	3727	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTTGGAACAAATTAGT	76713722	True	NA	NA	False	AATAAA	-20	NA	76716125	76735770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_76716396_76732313
transcript_75468.known	chr5	+	2861	2	FSM	ENSG00000164251.5	ENST00000296677.5	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	76815789	True	NA	10	True	TATAAA	-25	NA	76819029	76835315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_76819265_76832689
transcript_75469.known	chr5	+	607	2	FSM	ENSG00000164251.5	ENST00000514165.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTATGTCGTGAAGC	76818913	False	NA	NA	False	NA	NA	NA	76818932	76833227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_76819002_76832689
transcript_75472.known	chr5	+	1300	4	FSM	ENSG00000250802.7	ENST00000514640.5	1300	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTGTGTTAGATGATT	77087390	True	NA	NA	False	AATAAA	-33	NA	77087436	77105392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_77087620_77098654_77098748_77100235_77100392_77104524
transcript_75476.known	chr5	-	3678	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	24.0756908289023	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTCAGGCTCCAC	-77492287	False	NA	-5	True	ATTAAA	-28	NA	77492316	77430932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_75477.nic	chr5	-	2543	13	NIC	ENSG00000164253.14	novel	3678	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_12	66.4672016026618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACACATTAAAGATTGA	-77490913	True	NA	-32	True	AATGAA	-15	NA	77492507	77432243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489558_77492169
transcript_7549.known	chr1	-	1625	2	FSM	ENSG00000286391.2	ENST00000664303.2	1651	2	26	0	26	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	-154567592	True	NA	NA	False	NA	NA	NA	154567720	154564854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154566183_154567423
transcript_75491.known	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	77.181668808079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	-77492170	False	NA	1	True	AATAGA	-22	NA	77492199	77432812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_75495.known	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1216.04029538498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	-77732248	True	NA	-55	True	NA	NA	NA	77776261	77691266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
transcript_75497.known	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_2	19.7989898732233	3706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	-77732326	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
transcript_75500.known	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_1	21	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	-77732274	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77693353_77708241_77708348_77776204
transcript_75501.known	chr5	-	446	3	FSM	ENSG00000171530.15	ENST00000520361.5	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1221.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGTTTATTTTAT	-77732280	True	NA	-36	True	AATAAA	-12	NA	77776293	77691247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77708241_77708348_77776204
transcript_75502.known	chr5	-	3980	27	FSM	ENSG00000132842.14	ENST00000255194.11	3980	27	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_16	25.1896945209578	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	-78290786	True	NA	0	True	AATAAA	-18	NA	78294698	78002325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_75508.known	chr5	-	1479	2	FSM	ENSG00000245556.4	ENST00000421004.4	1482	2	0	3	0	-3	multi-exon	FALSE	canonical	3	27	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCATGTATATTTA	-78360477	False	NA	4	True	ATTAAA	-20	NA	78360507	78358800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_78359986_78360213
transcript_75509.known	chr5	+	6143	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	37.4631068519417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	78356302	True	NA	11	True	AATAAA	-22	NA	78360616	78480739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_75514.known	chr5	+	1603	3	FSM	ENSG00000085365.18	ENST00000506858.2	1603	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	162.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAGAAAATATAAATA	78457731	True	NA	NA	False	AATAAA	-23	NA	78457792	78476829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_78457952_78459244_78459363_78475503
transcript_75515.known	chr5	+	2470	8	FSM	ENSG00000145692.15	ENST00000274353.10	2470	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	2.43276948084663	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTATTTTATTCT	79111748	True	NA	NA	False	ATTAAA	-20	NA	79111808	79132288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754_79127984_79130932
transcript_75517.known	chr5	-	5798	9	FSM	ENSG00000152413.15	ENST00000334082.11	5798	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	21.608736659046	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATATCAAATGATTTT	-79512658	True	NA	NA	False	NA	NA	NA	79514134	79372635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_79376198_79396822_79396904_79397526_79397638_79401898_79402056_79439009_79439150_79447052_79447146_79450989_79451122_79456861_79457019_79512769
transcript_75521.known	chr5	+	3129	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.0169470753483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	79609509	True	NA	11	True	AATAAA	-21	NA	79612572	79686648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_75525.nic	chr5	+	3255	16	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	51.129465303504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	79609371	True	NA	11	True	AATAAA	-21	NA	79612434	79686648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_75529.known	chr5	+	3223	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	52.7255367181997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	NA	False	NA	11	True	AATAAA	-21	NA	79612432	79686648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_75534.known	chr5	+	5100	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	32.0417457294036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCTCATGAAATGAATA	79609377	True	NA	20	True	AATAAA	-24	NA	79612440	79688246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_75539.nic	chr5	+	3133	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	102	junction_6	32.2573358212626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	79612415	79686266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_7554.known	chr1	-	1002	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	23.2701525564402	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGAGCTGCTTGTCTC	-154933853	True	NA	-7	True	AATAAA	-15	NA	154936719	154924739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
transcript_75540.nic	chr5	+	3515	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	102	junction_6	32.2573358212626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	NA	False	NA	11	True	AATAAA	-21	NA	79612415	79686648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_75545.nnic	chr5	+	1493	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25700	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.8613807855649	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	79784398	True	NA	NA	False	AATAAA	-18	NA	79784452	79800222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79784685_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_75546.nnic	chr5	+	1392	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25718	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.7169905660283	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	79784416	True	NA	NA	False	AATAAA	-18	NA	79784470	79800222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79784602_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_75547.known	chr5	-	4778	8	FSM	ENSG00000177034.17	ENST00000509852.6	4778	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	15.9232854778203	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAAAAACCCT	-79989336	True	NA	NA	False	NA	NA	NA	79991259	79979776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_79983795_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_75551.nnic	chr5	+	773	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-8	-35811	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	36.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	79990714	True	NA	3	True	AATAAA	-17	NA	79991302	80020095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79991413_79998331_79998376_80019476
transcript_75552.nnic	chr5	+	727	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-8	-35811	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	40	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	79990714	True	NA	3	True	AATAAA	-17	NA	79991302	80020095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79991413_79998331_79998376_80019522
transcript_75553.nnic	chr5	+	513	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-8	-35811	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	34	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	79990714	True	NA	3	True	AATAAA	-17	NA	79991302	80020095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79991413_79998331_79998376_80019736
transcript_75558.known	chr5	-	4400	3	FSM	ENSG00000249042.6	ENST00000508000.6	4400	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATGTCTACAAAGAAT	-80488040	False	NA	NA	False	NA	NA	NA	80488070	80479160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80483167_80485465_80485562_80487772
transcript_75562.nnic	chr5	-	514	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	-19	-3639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTGACAGTTTTGT	-80488084	False	NA	NA	False	GATAAA	-4	NA	80488114	80482799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80482941_80486184_80486221_80487777
transcript_75567.known	chr5	-	3730	5	FSM	ENSG00000189127.8	ENST00000338682.8	3730	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	5.16599457994296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTACTGATTTTTAT	-80570109	False	171	0	True	AATAAA	-15	NA	80570280	80556754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80560043_80563734_80563816_80566688_80566775_80568959_80569108_80570153
transcript_75570.nnic	chr5	-	1604	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-122	-4737	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTGAGCAAACAAAG	-80570231	True	NA	NA	False	NA	NA	NA	80570402	80564705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80565827_80566688_80566775_80568959_80569108_80570153
transcript_75572.nnic	chr5	-	1312	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-187	-5094	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.942809041582063	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATGTCTAGGCAATTT	-80570296	True	NA	NA	False	AATAAA	-28	NA	80570467	80565062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80565827_80566688_80566775_80568959_80569108_80570153
transcript_75573.known	chr5	+	4443	24	FSM	ENSG00000113318.11	ENST00000265081.7	4443	24	0	0	0	0	multi-exon	FALSE	non_canonical	3	64	junction_1	9.26892892832073	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGGTATGTCCCATTG	80652472	True	NA	14	True	AATAAA	-23	NA	80654651	80876815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115_80873288_80875750
transcript_75576.known	chr5	-	3919	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_1	66.6855306644552	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTCCTGTTGTTCTT	-80653584	True	NA	0	True	AATAAA	-22	NA	80654983	80626225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_75578.known	chr5	-	1447	5	FSM	ENSG00000228716.7	ENST00000504396.1	1447	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	310.367826135378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTTTTAGACAGC	-80653159	False	NA	NA	False	NA	NA	NA	80654558	80628222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654403
transcript_75581.nnic	chr5	-	907	5	NNC	ENSG00000251450.2	novel	535	4	NA	NA	-181	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6.25999201277446	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATTTAATAAGTTCAAC	-80961077	False	NA	-1	True	AATAAA	-19	NA	80961088	80947693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80947995_80948328_80948405_80949760_80949949_80951446_80951481_80960780
transcript_75583.known	chr5	-	535	4	FSM	ENSG00000251450.2	ENST00000505694.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	-80960896	False	NA	-4	True	AATAAA	-16	NA	80960907	80947696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80947995_80948328_80948405_80951446_80951481_80960780
transcript_75586.known	chr5	-	2063	2	FSM	ENSG00000247572.9	ENST00000669977.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTAAAAAAGAAAATTTT	-81299472	True	NA	-30	True	AGTAAA	-1	NA	81301565	81237576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81239361_81301286
transcript_75587.known	chr5	-	2027	3	FSM	ENSG00000247572.9	ENST00000656836.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTAAAAATAAGCATGTG	-81299427	True	NA	-74	True	NA	NA	NA	81301520	81237620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81239361_81240327_81240381_81301286
transcript_75588.known	chr5	+	1476	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.2704627669473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	81233115	True	NA	NA	False	AATAAA	-16	NA	81233321	81266398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_75589.nic	chr5	+	1427	9	NIC	ENSG00000131730.16	novel	1476	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	5.54385921538417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	81233078	True	NA	NA	False	AATAAA	-16	NA	81233284	81266398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_75590.nic	chr5	+	973	6	NIC	ENSG00000131730.16	novel	1476	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	6.78232998312527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACTATGGTAACTTC	81233078	True	NA	19	True	AATAAA	-26	NA	81233284	81257923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81257732
transcript_75593.known	chr5	+	1372	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	64.9812280585709	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	81298122	True	NA	21	True	AATAAA	-35	NA	81301623	81313154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_75594.known	chr5	+	1248	6	FSM	ENSG00000131732.12	ENST00000438268.2	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.5382547100429	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAGCACTATCATG	81298139	True	NA	NA	False	AAAACA	-28	NA	81301640	81312662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81302056_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_75596.known	chr5	+	768	5	FSM	ENSG00000131732.12	ENST00000507402.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	88.0720585656995	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAACCAAGTAGTTGTA	81298088	True	NA	NA	False	ATTAAA	-41	NA	81301589	81312917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301671_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_75597.known	chr5	+	818	5	FSM	ENSG00000131732.12	ENST00000506458.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	85.0573336050455	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATGCATAAATGTAAAA	81298121	True	NA	NA	False	TATAAA	-6	NA	81301622	81312972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301699_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_7560.known	chr1	-	3207	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	9.17877987534291	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	-154956089	False	5085	-27	True	AATAAA	-17	NA	154956099	154944079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_75601.known	chr5	+	1580	6	FSM	ENSG00000131732.12	ENST00000407610.8	1580	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.6193093041928	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	81298085	True	NA	NA	False	AATAAA	-30	NA	81301586	81313297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301699_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_75606.known	chr5	-	8780	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	217	0	-217	multi-exon	TRUE	canonical	3	116	junction_14	17.8648353966668	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGTATATAATTGAA	-81751234	False	NA	NA	False	CATAAA	-24	NA	81751253	81413020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_75607.nic	chr5	-	1732	17	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	41.1185405261422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	-81751779	True	NA	-34	True	AATAAA	-24	NA	81751807	81419935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81751667
transcript_75608.known	chr5	-	4465	17	FSM	ENSG00000145687.17	ENST00000615665.4	4465	17	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	39.789288759665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTCTTAACTACGT	-81751234	False	NA	NA	False	AATACA	-23	NA	81751253	81417359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_7561.nnic	chr1	-	2577	13	NNC	ENSG00000160691.19	novel	3062	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	296.762203717986	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960474	True	NA	-14	True	ATTAAA	-17	NA	154970767	154962297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_75611.known	chr5	-	1790	16	FSM	ENSG00000145687.17	ENST00000514493.5	1790	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	41.4340707898973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCCTGTGAATCACAA	-81751231	False	NA	-16	True	AATAAA	-42	NA	81751250	81419917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_75612.known	chr5	-	1521	16	FSM	ENSG00000145687.17	ENST00000505980.5	1521	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	42.0875278437686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACTCAGATGTTATGG	-81751028	False	NA	-112	True	NA	NA	NA	81751047	81420013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_75613.nic	chr5	-	1729	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	36.5106218819138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-34	True	AATAAA	-24	NA	81616620	81419935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
transcript_7562.known	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	258.538990719431	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_75626.known	chr5	-	1396	13	FSM	ENSG00000145687.17	ENST00000504985.5	1396	13	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	44.6308158363952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-34	True	AATAAA	-24	NA	81513717	81419935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627
transcript_75627.known	chr5	+	1795	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	32.8878301959859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	81971578	False	NA	20	True	ATTAAA	-26	NA	81972050	82254792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_75629.known	chr5	+	3029	8	FSM	ENSG00000152348.16	ENST00000282185.8	3029	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	12.4408806040441	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTGTTCTTGTCT	81972003	False	NA	4	True	AATAAA	-17	NA	81972022	82256133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_75632.nnic	chr5	+	1540	8	NNC	ENSG00000152348.16	novel	618	5	NA	NA	-6650	-374	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.3856890459276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTTCCTGTA	81980851	True	NA	2	True	AATACA	-15	NA	81980907	82254418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_81981418_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_75640.nnic	chr5	+	1580	7	NIC	ENSG00000152348.16	novel	3029	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	34.7067076450008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	81972003	False	NA	20	True	ATTAAA	-26	NA	81972022	82254792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81972307_81987558_81987679_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_75643.nic	chr5	+	1027	6	NIC	ENSG00000152348.16	novel	3029	8	NA	NA	0	125	intron_retention	FALSE	canonical	2	20	junction_5	38.3322318682333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTACAAAGGCTGTGAT	81972003	False	NA	2	True	AATAAA	-17	NA	81972022	82276422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82276144
transcript_75647.known	chr5	+	1438	4	FSM	ENSG00000152348.16	ENST00000355178.8	1438	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	54.8148398398341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTATTTTTCTGTGAGT	81971552	True	NA	NA	False	AATAAA	-20	NA	81972024	82148117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82147189
transcript_75651.known	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_3	6064.2309945743	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	-82278052	False	NA	-113	True	NA	NA	NA	82278143	82276154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
transcript_75652.known	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	10370	junction_3	1541.98407543298	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	-82082969	True	NA	-10	True	AATAAA	-17	NA	82278354	82273319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
transcript_75653.known	chr5	-	576	3	FSM	ENSG00000186468.13	ENST00000504293.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13479	junction_1	151.5	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATCTTACTGTCCC	-82277860	False	NA	-18	True	AATAAA	-19	NA	82277951	82276059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_82276256_82276397_82276519_82277692
transcript_75657.known	chr5	+	1243	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_7	53.1516889742586	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	83074731	True	NA	21	True	AATAAA	-21	NA	83077556	83311069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_75658.known	chr5	+	1602	8	FSM	ENSG00000152422.16	ENST00000396027.9	1602	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	20.6318556942354	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTGTTTTTAATAAA	83074721	True	NA	13	True	AATAAA	-18	NA	83077546	83353760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
transcript_75659.nic	chr5	+	1254	8	NIC	ENSG00000152422.16	novel	1243	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	61.4966400276786	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	83074767	True	NA	21	True	AATAAA	-21	NA	83077592	83311069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_75660.known	chr5	+	1636	8	FSM	ENSG00000152422.16	ENST00000511817.1	1636	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.5722311345809	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGTTAACTTTTATTT	83074767	True	NA	40	True	AATAAA	-45	NA	83077592	83353787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_75663.known	chr5	-	4528	4	FSM	ENSG00000174695.10	ENST00000502346.2	4528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1958	junction_3	151.422147213235	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTACTTTTGTCTT	-83056173	True	NA	-9	True	AATAAA	-20	NA	83077394	83052845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077320
transcript_75668.known	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	-83056232	True	NA	-88	True	NA	NA	NA	83077453	83056726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83057155_83061876_83061912_83077320
transcript_75672.known	chr5	+	3973	7	FSM	ENSG00000038427.16	ENST00000513960.5	3973	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_6	29.2175746198528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAAGTACAAA	83468629	True	NA	NA	False	NA	NA	NA	83471776	83539684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006
transcript_75674.known	chr5	+	1825	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	15.6409718368137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	83468643	False	NA	NA	False	AATAAA	-29	NA	83471790	83512940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
transcript_75676.nic	chr5	+	892	3	ISM	ENSG00000038427.16	ENST00000513984.5	1825	6	-390	22650	-217	6686	5prime_fragment	FALSE	canonical	3	261	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAATATCAAGATTGGTC	83471273	False	NA	61	True	NA	NA	NA	83471400	83490290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_83472024_83483512_83483589_83490097
transcript_75677.known	chr5	-	4849	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.22841614740048	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTCTTCTCTTTAGC	-83720291	True	NA	NA	False	ATTAAA	-21	NA	83720855	83637804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
transcript_75679.known	chr5	-	4814	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	54.5468605879385	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATTGTCTGAATGTGA	-84383998	True	NA	33	True	ATTAAA	-17	NA	84384880	83940553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_7568.known	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	TRUE	canonical	3	668	junction_3	142.641375426175	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960454	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_75680.known	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	45.3431361950185	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-84379545	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
transcript_75682.nic	chr5	-	1284	5	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	461	195917	-33	-29811	5prime_fragment	FALSE	canonical	3	149	junction_3	68.0238928612587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAAAAAAGTAGTAACAG	-84379578	True	NA	NA	False	AAAAAG	-12	NA	84384419	84136470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_75683.nic	chr5	-	796	4	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	449	239455	-45	-73349	5prime_fragment	FALSE	canonical	3	149	junction_2	65.2908024831131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACAAAACTGCCACC	-84379590	True	NA	NA	False	NA	NA	NA	84384431	84180008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_84180522_84229854_84229885_84254083_84254213_84384307
transcript_75685.known	chr5	+	265	4	FSM	ENSG00000250320.7	ENST00000515688.6	703	4	96	342	-16	-342	multi-exon	FALSE	canonical	2	3	junction_1	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGTGGCTCATGC	84383536	True	NA	NA	False	NA	NA	NA	84384555	84417316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_84384600_84387821_84387937_84399584_84399653_84417278
transcript_75687.nnic	chr5	+	452	4	NIC	ENSG00000250320.7	novel	552	5	NA	NA	-110	-23	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	7.84573486395988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATCTCCACAAGACCT	84384699	True	NA	NA	False	AATAAA	-2	NA	84384711	84400759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_84384879_84387821_84387937_84399584_84399653_84400657
transcript_75688.known	chr5	+	2404	2	FSM	ENSG00000250320.7	ENST00000653332.1	2404	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTGTATATATAGTG	84382404	True	NA	NA	False	NA	NA	NA	84382486	84390173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_84382539_84387821
transcript_75689.known	chr5	+	3603	2	FSM	ENSG00000250320.7	ENST00000654215.1	3603	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAATTGTTGTTTTAAT	84385830	False	NA	NA	False	NA	NA	NA	84385888	84391257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_84386056_84387821
transcript_75692.known	chr5	+	496	4	FSM	ENSG00000127184.13	ENST00000505430.5	496	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	393.308473790682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572649	True	NA	24	True	AATAAA	-14	NA	86617940	86620766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618054_86619352_86619497_86619738_86619879_86620667
transcript_75693.known	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	5743.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572681	True	NA	24	True	AATAAA	-14	NA	86617972	86620766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618131_86619352_86619443_86620667
transcript_75694.known	chr5	+	629	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	11108	junction_2	202.5	8519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	86572649	True	NA	11	True	AATAAA	-18	NA	86617940	86620962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618131_86619352_86619497_86620667
transcript_75695.known	chr5	+	369	3	FSM	ENSG00000127184.13	ENST00000511472.5	369	3	0	0	0	0	multi-exon	TRUE	canonical	3	877	junction_1	5115.5	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572636	True	NA	24	True	AATAAA	-14	NA	86617927	86620766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618054_86619352_86619497_86620667
transcript_75696.known	chr5	+	581	3	FSM	ENSG00000127184.13	ENST00000510447.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	1	66	junction_1	5521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACAAATCGATCTTAG	86618161	False	NA	-3	True	AATAAA	-4	NA	86618174	86620948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618331_86619352_86619497_86620667
transcript_75699.known	chr5	+	1584	2	FSM	ENSG00000127184.13	ENST00000509578.1	1584	2	0	0	0	0	multi-exon	FALSE	canonical	3	11513	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTAATGCCTCTT	86572664	True	NA	19	True	AATAAA	-9	NA	86617955	86620761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618131_86619352
transcript_75701.known	chr5	+	4746	25	FSM	ENSG00000145715.15	ENST00000274376.11	4746	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	28.3709309368273	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGATTACTTCTGTCTA	87266934	True	NA	11	True	AATAAA	-19	NA	87267882	87391916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_87268991_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
transcript_75709.known	chr5	-	1497	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	141.007479854794	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87407470	True	NA	-11	True	AATAAA	-15	NA	87412904	87394273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
transcript_75710.known	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	29.4403528341628	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87407496	True	NA	-11	True	AATAAA	-15	NA	87412930	87394273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
transcript_75718.known	chr5	-	451	4	FSM	ENSG00000134480.16	ENST00000511207.5	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_3	27.7968823191858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGCTAGAATAGCACC	-87401758	False	NA	-17	True	AATAAA	-9	NA	87401774	87394279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701
transcript_75719.nnic	chr5	-	1350	4	NNC	ENSG00000287862.1	novel	1977	4	NA	NA	-278	-74267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGATTATTGTATCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	88052844	87938779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_87939696_88047588_88047695_88052285_88052445_88052675
transcript_75723.nic	chr5	+	843	7	NIC	ENSG00000247828.9	novel	1316	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	38.2477305063828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	NA	False	NA	7	True	AATAAA	-19	NA	88268867	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88283009_88283087_88285740_88285852_88287435
transcript_75729.nic	chr5	+	766	6	FSM	ENSG00000247828.9	ENST00000688118.1	715	6	-55	4	0	-2	multi-exon	FALSE	canonical	3	17	junction_4	36.7118509476164	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	NA	False	NA	7	True	AATAAA	-19	NA	88268867	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_75730.nic	chr5	+	763	6	FSM	ENSG00000247828.9	ENST00000688523.1	717	6	-50	4	0	-2	multi-exon	FALSE	canonical	3	22	junction_4	35.2442903177238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	NA	False	NA	7	True	AATAAA	-19	NA	88268867	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_75736.known	chr5	+	711	6	FSM	ENSG00000247828.9	ENST00000662970.2	715	6	0	4	0	-2	multi-exon	FALSE	canonical	3	17	junction_4	37.9125309099775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	88266631	True	NA	7	True	AATAAA	-19	NA	88269014	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_75737.nic	chr5	+	727	6	FSM	ENSG00000247828.9	ENST00000688398.1	712	6	-19	4	0	-2	multi-exon	FALSE	canonical	3	22	junction_4	36.4549036482062	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	88266612	True	NA	7	True	AATAAA	-19	NA	88268995	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_7574.nic	chr1	-	2042	12	NIC	ENSG00000160691.19	novel	3062	13	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	364.580524270957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGACCCCTGAATTC	-154969202	True	NA	-3	True	NA	NA	NA	154974441	154963328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_75743.nic	chr5	+	657	5	FSM	ENSG00000247828.9	ENST00000688087.1	636	5	-23	2	0	0	multi-exon	FALSE	canonical	3	9	junction_4	43.6835209203654	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	NA	False	NA	9	True	AATAAA	-21	NA	88268867	88287655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_75744.nic	chr5	+	614	5	NIC	ENSG00000247828.9	novel	715	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	45.5219727164806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	NA	False	NA	7	True	AATAAA	-19	NA	88268867	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_88269028_88270525_88270586_88282041_88282107_88285740_88285852_88287435
transcript_75747.known	chr5	+	553	5	FSM	ENSG00000247828.9	ENST00000668037.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	44.9520577949442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	88269012	False	NA	9	True	AATAAA	-21	NA	88269063	88287655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_75748.nic	chr5	+	578	5	NIC	ENSG00000247828.9	novel	715	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	46.7031851162209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	88266612	True	NA	7	True	AATAAA	-19	NA	88268995	88287653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_88269120_88270525_88270586_88282041_88282107_88285740_88285852_88287435
transcript_75752.known	chr5	+	5261	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	47.6818157745231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	88266533	True	NA	-19	True	NA	NA	NA	88268916	88287627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
transcript_75756.known	chr5	+	3379	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	32.6190128606002	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAATAAATCAATGT	88266507	True	NA	NA	False	NA	NA	NA	88268890	88439332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
transcript_75759.known	chr5	+	4644	4	FSM	ENSG00000247828.9	ENST00000660783.1	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	48.8898989794643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTAAGTAACTTT	88266631	True	NA	11	True	NA	NA	NA	88269014	88287016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282602
transcript_75761.known	chr5	+	3315	4	FSM	ENSG00000247828.9	ENST00000671394.1	3315	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	35.9103822808329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAATGCAAGACCAGTG	88266631	True	NA	NA	False	NA	NA	NA	88269014	88439300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88436272
transcript_75762.known	chr5	+	3439	3	FSM	ENSG00000247828.9	ENST00000661377.2	3521	3	82	0	20	0	multi-exon	FALSE	canonical	3	101	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTACAAAATTA	88266569	True	NA	NA	False	NA	NA	NA	88268952	88285345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041
transcript_75764.known	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	2	40	junction_2	30.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	88266532	True	NA	33	True	AATAAA	-37	NA	88268915	88436685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88436272
transcript_75765.known	chr5	+	3391	3	FSM	ENSG00000247828.9	ENST00000659005.2	3454	3	63	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCCCATCTGTACAAA	88269047	True	NA	NA	False	NA	NA	NA	88269077	88285330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041
transcript_75767.known	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	2	40	junction_2	34	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	88266640	True	NA	16	True	AATAAA	-43	NA	88269023	88436668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88436272
transcript_75769.known	chr5	+	15798	6	FSM	ENSG00000247828.9	ENST00000670451.1	15798	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	25.0391693152948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAGGGATGCAAGCATA	88266632	True	NA	NA	False	AATACA	-20	NA	88269015	88293988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88269467_88282107_88282714_88282867_88285740_88285852_88287435_88287623_88291383
transcript_75771.known	chr5	+	645	6	FSM	ENSG00000247828.9	ENST00000507736.2	645	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	40.4207867315816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	88266654	True	NA	11	True	AATAAA	-23	NA	88269037	88287657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269076_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_75772.known	chr5	+	932	7	FSM	ENSG00000247828.9	ENST00000661351.1	932	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	40.5562024301531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	88266631	True	NA	11	True	AATAAA	-23	NA	88269014	88287657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88269467_88269688_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_75777.known	chr5	-	2750	12	FSM	ENSG00000164180.14	ENST00000296595.11	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_2	8.70736365487177	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATAGGACTTGTTTTA	-88267832	True	NA	NA	False	NA	NA	NA	88268845	88195046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_75779.nic	chr5	-	2542	11	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	21.4580987042189	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTAAAGTTTTATGG	-88267850	True	NA	21	True	NA	NA	NA	88268863	88195168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88268720
transcript_75782.nic	chr5	-	2509	11	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	20.7894203863407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTAAGCAATTTATT	-88267848	True	NA	-17	True	ATTAAA	-18	NA	88268861	88195206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_88196489_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_75790.nnic	chr5	+	925	4	NIC	ENSG00000248309.8	novel	997	5	NA	NA	11	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGAATTATCCA	88889281	False	NA	NA	False	AATAAA	-28	NA	88889314	89032379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_88889481_88905208_88905271_88965840_88965916_89031757
transcript_75791.known	chr5	-	1026	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	336.119621563514	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAATTTGTTTTTAT	-90405793	True	NA	1	True	AATAAA	-27	NA	90409757	90393709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_75793.known	chr5	-	738	6	FSM	ENSG00000153140.9	ENST00000522864.5	738	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	340.126682281764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAGCTTTTATATAAA	-90405768	True	NA	-41	True	NA	NA	NA	90409732	90393858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90394108_90396492_90396565_90399471_90399550_90405684_90405800_90407698_90407835_90409644
transcript_75800.known	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	60.6892700565759	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	-90405792	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_75804.known	chr5	-	664	3	FSM	ENSG00000153140.9	ENST00000522842.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_2	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAAAACTTGAAGGGTG	-90405802	True	NA	NA	False	NA	NA	NA	90409766	90405393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90405800_90407698_90407835_90409644
transcript_75811.known	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	125.775147605169	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	90460410	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_75814.known	chr5	+	3290	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	73.0375916629126	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	90460385	True	NA	NA	False	AATAAA	-22	NA	90474863	90514557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_75825.nic	chr5	+	1051	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	175	-80	combination_of_known_junctions	FALSE	canonical	3	123	junction_3	219.624426894844	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTATATGTGCCTA	90474416	False	NA	12	True	AATAAA	-18	NA	90474435	90490778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
transcript_75826.known	chr5	+	682	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	209.382159910745	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	90460416	True	NA	92	True	CATAAA	-20	NA	90474894	90490858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
transcript_75828.known	chr5	-	4277	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATCTATAATTGATAT	-90474336	True	NA	-33	True	AATAAA	-15	NA	90474771	90458208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90461553_90473838
transcript_75830.nnic	chr5	+	1554	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-99	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_1	40.348482003664	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929140	91164216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_75831.nic	chr5	+	1634	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	42.0160319256294	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90928451	True	NA	14	True	AATAAA	-14	NA	90929145	91164216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_75832.nic	chr5	+	1629	8	NIC	ENSG00000164199.18	novel	564	4	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	48.4055992713273	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90929394	True	NA	14	True	AATAAA	-14	NA	90929413	91164216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90929662_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_75834.nnic	chr5	+	1362	7	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	57.0545547894489	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929140	91164216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_75835.nic	chr5	+	1442	7	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	58.1504275325833	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90928451	True	NA	14	True	AATAAA	-14	NA	90929145	91164216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_75838.known	chr5	+	2221	6	FSM	ENSG00000164199.18	ENST00000638316.1	2221	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	2.85657137141714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATAAATAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	90558685	90626582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129
transcript_75840.nnic	chr5	+	1124	6	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	64.338479932308	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90928506	True	NA	14	True	AATAAA	-14	NA	90929200	91164216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_75841.known	chr5	+	893	6	FSM	ENSG00000164199.18	ENST00000639821.1	893	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	65.4235431629929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGCTTTTGTGCTAAA	90928545	True	NA	NA	False	NA	NA	NA	90929239	91163939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_75846.known	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-90526467	True	NA	0	True	AATAAA	-23	NA	90529584	90515625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90519485_90525034_90525301_90529447
transcript_7585.known	chr1	+	912	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	2364	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	154939924	True	NA	40	True	ATTAAA	-20	NA	154974652	154979248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154974913_154977986_154978115_154978724
transcript_75852.known	chr5	+	2500	3	FSM	ENSG00000281357.4	ENST00000625713.2	2500	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGCTGTTCTAGATGC	91380023	True	NA	NA	False	AATAAA	-21	NA	91380348	91420715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_91380925_91418708_91418772_91418854
transcript_75853.known	chr5	-	4239	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	3.614031611621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGTAAGAATTGTATC	-91383090	True	NA	94	True	ATTAAA	-29	NA	91383317	91368630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
transcript_75855.nic	chr5	-	1711	2	ISM	ENSG00000113369.9	ENST00000507075.1	355	3	-444	1013	-2	-1013	5prime_fragment	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAAACACCAGTGTTT	-91383092	True	NA	NA	False	NA	NA	NA	91383319	91377571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_91378776_91382812
transcript_75856.known	chr5	-	591	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	-93422327	True	NA	-15	True	AATAAA	-4	NA	93422423	93411032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_93411510_93422309
transcript_75857.nic	chr5	-	1118	7	ISM	ENSG00000113391.19	ENST00000395965.8	4684	11	-2	263586	-2	0	5prime_fragment	FALSE	canonical	3	29	junction_5	15.0296004234607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	-94110954	True	NA	NA	False	ATTAAA	-17	NA	94111665	93881310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_75858.known	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	13.2245982925758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-94110952	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_75861.known	chr5	-	830	1	FSM	ENSG00000249353.2	ENST00000502784.2	830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAGTTTAAACAATT	-93683636	False	NA	NA	False	NA	NA	NA	93683667	93682837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_93682800_93683700
transcript_75862.known	chr5	-	2262	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.76969600708473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-94618285	True	NA	11	True	AATAAA	-26	NA	94618597	94519205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
transcript_75863.nic	chr5	-	2125	4	ISM	ENSG00000185261.15	ENST00000513200.7	4942	20	-40	366240	-7	0	5prime_fragment	FALSE	canonical	0	0	junction_3	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-94618299	True	NA	11	True	AATAAA	-26	NA	94618611	94519205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_94520918_94523929_94524099_94536995_94537128_94618499
transcript_75864.known	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_7	17.3547543918086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	94616242	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
transcript_75869.nic	chr5	+	1067	8	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-26	44288	-26	-1418	5prime_fragment	FALSE	canonical	3	91	junction_7	18.405855323893	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAAGAAAGCAATT	94616216	True	NA	NA	False	AAAAAG	-44	NA	94618642	94653333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271
transcript_75870.nic	chr5	+	930	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-26	45851	-26	-2981	5prime_fragment	FALSE	canonical	3	122	junction_2	11.5385826204473	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGGTTCCAGTAAAGA	94616216	True	NA	-66	True	AAAAAG	-6	NA	94618642	94651770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_75871.nic	chr5	+	1005	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-26	45776	-26	-2906	5prime_fragment	FALSE	canonical	3	122	junction_2	11.5385826204473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAACTTTCCAAATTAAA	94616216	True	NA	9	True	NA	NA	NA	94618642	94651845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_75879.known	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_30	27.359121732068	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	-95549375	True	NA	-21	True	AATAAA	-15	NA	95554977	95463893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_75880.known	chr5	+	3365	8	FSM	ENSG00000164291.17	ENST00000380009.9	3365	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	6.5621051873462	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGAATGGCCTTCTCC	95552358	True	NA	52	True	NA	NA	NA	95555100	95605102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
transcript_75885.known	chr5	+	1088	2	FSM	ENSG00000164291.17	ENST00000504763.1	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTGCATTC	95552424	True	NA	NA	False	AATAAA	-35	NA	95555166	95557057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95555405_95556207
transcript_75887.known	chr5	+	2582	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	12.3028451993838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAAATCTTCTCATC	95646279	True	NA	NA	False	AATAAA	-24	NA	95646776	95658082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_75889.known	chr5	+	2788	6	FSM	ENSG00000175449.14	ENST00000458310.1	2788	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.3469899493758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTTTTAGAACTTTG	95646381	False	NA	1	True	AATAAA	-8	NA	95646878	95657133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95648075_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_7589.known	chr1	+	390	3	FSM	ENSG00000173207.13	ENST00000473344.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTAACTGCTTTGCTTCTT	154975512	False	NA	NA	False	AATACA	-15	NA	154975538	154978916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154975609_154977986_154978115_154978724
transcript_75892.known	chr5	+	615	5	FSM	ENSG00000175449.14	ENST00000511684.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	6.41774882649672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACACAGTGACAGTAGAC	95646256	True	NA	NA	False	AATAAA	-9	NA	95646753	95656190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95646818_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_75899.known	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	-95819912	True	NA	-1	True	AATAAA	-24	NA	95822714	95813970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95814958_95816506_95816627_95822455
transcript_7590.known	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	4039	junction_1	398.5	6952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	154939952	True	NA	43	True	ATTAAA	-23	NA	154974680	154979251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154974805_154977986_154978115_154978724
transcript_75900.nnic	chr5	-	841	3	NNC	ENSG00000173221.14	novel	932	3	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGATTTTTGTCCAAT	-95819951	True	NA	-8	True	AATAAA	-17	NA	95822753	95813977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_95814390_95816495_95816627_95822455
transcript_75901.known	chr5	-	632	3	FSM	ENSG00000173221.14	ENST00000505427.1	632	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	125.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTAAAATCATTTTGCT	-95819920	True	NA	NA	False	NA	NA	NA	95822722	95814562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95814808_95816506_95816627_95822455
transcript_75903.known	chr5	-	932	3	FSM	ENSG00000173221.14	ENST00000237858.11	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	3	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTACAAATGGCT	-95819924	True	NA	-12	True	AATAAA	-18	NA	95822726	95813848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95814390_95816506_95816627_95822455
transcript_75904.known	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_10	15.592963023998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-95958567	True	NA	-7	True	AATAAA	-17	NA	95961851	95885097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
transcript_75905.nic	chr5	-	1123	3	ISM	ENSG00000118985.16	ENST00000635633.1	467	5	-240	18159	-63	10939	5prime_fragment	FALSE	canonical	3	7	junction_1	38	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCCCACAGACTTTAAAA	-95958630	True	NA	NA	False	NA	NA	NA	95961914	95931978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_95932714_95943001_95943050_95961574
transcript_75907.nic	chr5	-	863	5	ISM	ENSG00000175426.11	ENST00000311106.8	5136	14	12	31498	12	1552	5prime_fragment	FALSE	canonical	3	20	junction_4	4.69041575982343	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTTTGAGAAAATTATA	-96433009	True	NA	2	True	AATAAA	-20	NA	96433236	96421830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_75909.known	chr5	+	4263	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.2159303944238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	96662770	True	NA	NA	False	NA	NA	NA	96663003	96774481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_7591.known	chr1	+	739	3	FSM	ENSG00000173207.13	ENST00000474215.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	2409.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGCTGTAATTG	154975504	False	NA	33	True	ATTAAA	-13	NA	154975530	154979241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154975625_154977986_154978115_154978724
transcript_75910.known	chr5	+	4356	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	53.8359025142551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	96701356	True	NA	NA	False	ATTAAA	-18	NA	96702788	96774679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_75911.known	chr5	+	2466	30	FSM	ENSG00000153113.24	ENST00000511782.5	2466	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.3071570915602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAAAGAAAATGAATTTG	96701373	True	NA	-18	True	NA	NA	NA	96702805	96772786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96702916_96722638_96722719_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_75912.known	chr5	+	4282	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	33.6349702614674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	96701368	True	NA	NA	False	ATTAAA	-22	NA	96702800	96774683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_75917.nic	chr5	+	2609	28	NIC	ENSG00000153113.24	novel	4356	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	46.1878730394917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTCTGATTTCTTA	96701356	True	NA	4	True	TTTAAA	-6	NA	96702788	96773055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_96702916_96722638_96722699_96727488_96727531_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_75921.nic	chr5	+	1999	2	ISM	ENSG00000113441.16	ENST00000231368.10	12134	18	-58	56530	-58	-17101	5prime_fragment	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATTCTTGCGTGAGAT	96935541	True	NA	NA	False	AATAAA	-19	NA	96936021	96980983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_96936175_96979137
transcript_75928.known	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_7	19.5776390460465	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	-97178570	True	NA	0	True	AATAAA	-17	NA	97183247	97160866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_75929.known	chr5	-	2149	8	FSM	ENSG00000058729.11	ENST00000508447.1	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_5	19.7608146572546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTGAATTTTCTC	-97178545	True	NA	NA	False	AATAAA	-19	NA	97183222	97166745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_75930.known	chr5	-	463	3	FSM	ENSG00000246763.7	ENST00000657458.1	463	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGCTTGCGATTTGTGC	-98773346	False	NA	NA	False	NA	NA	NA	98773363	98770954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_98771185_98772621_98772799_98773307
transcript_75931.known	chr5	-	397	2	FSM	ENSG00000246763.7	ENST00000505677.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCGATTTGTGCAATCC	-98773405	True	NA	NA	False	NA	NA	NA	98773469	98770949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_98771185_98773307
transcript_75932.known	chr5	+	1287	3	FSM	ENSG00000174132.9	ENST00000312637.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAAATTATGTGTTT	100534911	True	NA	11	True	AATAAA	-23	NA	100535373	100586741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_100535965_100562053_100562189_100586180
transcript_75935.known	chr5	-	6321	5	FSM	ENSG00000113532.13	ENST00000231461.10	6321	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4790199457749	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTATATCCATTTTAT	-100903182	True	NA	NA	False	AATAAA	-18	NA	100903282	100806932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_100812130_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_75937.known	chr5	-	5069	13	FSM	ENSG00000173930.9	ENST00000310954.7	5069	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	7.09998043815772	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTGTTTGAGCTTATT	-102295600	True	NA	3	True	ATTAAA	-20	NA	102296284	102233985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_102237019_102239250_102239389_102240717_102240783_102247251_102247443_102249637_102249789_102257114_102257311_102257942_102258088_102260212_102260320_102261911_102262034_102263683_102263781_102270623_102270807_102291342_102291607_102295907
transcript_75939.known	chr5	-	944	2	FSM	ENSG00000250682.6	ENST00000510145.1	944	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAGGAGGCAGAATG	-102671486	False	NA	NA	False	NA	NA	NA	102671559	102609155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_102609767_102671226
transcript_75943.known	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.5017005425652	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-103119475	True	NA	-3	True	AATAAA	-19	NA	103120138	103085999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_75946.known	chr5	-	3325	7	FSM	ENSG00000145723.17	ENST00000512248.5	3325	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.8379994774504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-103119445	True	NA	-3	True	AATAAA	-19	NA	103120108	103085999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103108568_103108715_103120063
transcript_75948.known	chr5	-	1040	5	FSM	ENSG00000145723.17	ENST00000508629.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.8446217637202	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGACACATTCTTAA	-103119434	True	NA	2	True	ATTAAA	-18	NA	103120097	103087812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103088173_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_75950.nic	chr5	+	1684	11	ISM	ENSG00000145725.20	ENST00000613674.4	4933	33	-109	48438	19	-4380	5prime_fragment	FALSE	canonical	3	104	junction_8	21.7448844558898	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGGAAGTGAGACAT	103116755	True	NA	NA	False	AAAACA	-6	NA	103120280	103153909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847
transcript_75951.nic	chr5	+	1054	3	ISM	ENSG00000145725.20	ENST00000613674.4	4933	33	-238	68576	3	258	5prime_fragment	FALSE	canonical	3	118	junction_2	27.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACATTGTGATATATT	NA	False	NA	NA	False	AATAAA	-28	NA	103120151	103133771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_103120489_103129305_103129704_103133452
transcript_75952.known	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	22.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	103257392	True	NA	13	True	AATAAA	-15	NA	103258762	103278660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_103258897_103265907_103265998_103275896
transcript_75955.known	chr5	+	1573	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	58	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGATACAAAGTATTTA	103258453	True	NA	5	True	AATAAA	-7	NA	103259035	103277228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_103259187_103265907_103265998_103275896
transcript_75958.known	chr5	+	2933	3	FSM	ENSG00000181751.10	ENST00000510890.1	2933	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTGTGTGGTGCTTT	103259394	True	NA	17	True	AATAAA	-17	NA	103259423	103278371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_103259792_103265907_103265998_103275896
transcript_7596.known	chr1	+	1730	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_3	137.474153414898	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974971	True	NA	22	True	AATAAA	-18	NA	154983358	154993111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_75960.known	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	8.4803694888057	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	-103561485	True	NA	-4	True	ATTAAA	-14	NA	103562789	103548854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
transcript_75961.known	chr5	-	1781	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	28.318133177642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTGATGATGAAGAAA	-103561485	True	NA	NA	False	CATAAA	-22	NA	103562789	103550507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
transcript_75966.nic	chr5	-	2083	6	NIC	ENSG00000112874.10	novel	3488	7	NA	NA	-20	-347	intron_retention	FALSE	canonical	3	103	junction_2	7.38647412504776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAAGCTTTGAGTATTA	-103561506	True	NA	-1	True	AATAAA	-20	NA	103562810	103550854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103560255_103562702
transcript_75969.nnic	chr5	-	2072	4	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1637	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	4.96655480858378	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106982461	False	NA	-4	True	ATTAAA	-20	NA	106982506	106815196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_106815547_106818398_106818478_106980763_106980871_106980970
transcript_75978.nnic	chr5	+	1030	3	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	11	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	106978746	False	NA	22	True	AATAAA	-22	NA	106978786	106984050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_+_106979187_106980711_106980920_106983628
transcript_75980.nnic	chr5	-	1993	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1637	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	3	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106982461	False	NA	-4	True	ATTAAA	-20	NA	106982506	106815196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_106815547_106980763_106980871_106980970
transcript_75982.nnic	chr5	+	820	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	106978745	False	NA	16	True	AATAAA	-16	NA	106978785	106984044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_+_106979187_106983625
transcript_75986.known	chr5	-	436	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAATCATTGCTCTTTGT	-108727993	True	NA	-8	True	ATTAAA	-19	NA	108728260	108727824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_108727800_108728300
transcript_75989.known	chr5	-	4856	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	22.0543660468488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCTAATATTTAATT	-109404534	True	NA	-16	True	AATAAA	-17	NA	109409974	109334721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
transcript_75990.nic	chr5	-	1394	4	ISM	ENSG00000198961.10	ENST00000361189.7	4856	10	-15	43606	-15	839	5prime_fragment	FALSE	canonical	3	289	junction_1	11.8977121983832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAACAGAAAATAACCAA	-109404549	True	NA	NA	False	NA	NA	NA	109409989	109378327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_109379255_109381502_109381704_109383402_109383521_109409841
transcript_75991.known	chr5	+	6553	22	FSM	ENSG00000112893.10	ENST00000261483.5	6553	22	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	43.8492056309703	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCTCTAGAGTAGTT	109687076	True	NA	18	True	AATAAA	-19	NA	109689926	109869625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656_109847791_109855139_109855335_109865035_109865147_109866845
transcript_75993.known	chr5	-	546	4	FSM	ENSG00000186952.15	ENST00000503527.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGCTATCCTTG	-110738884	True	NA	NA	False	AATATA	-12	NA	110738918	110666767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_110666867_110667227_110667365_110734902_110735016_110738721
transcript_75994.known	chr5	-	437	3	FSM	ENSG00000186952.15	ENST00000502857.6	437	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTGAATGGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	110726705	110666645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_110666867_110667227_110667365_110726626
transcript_75996.nnic	chr5	+	1298	9	NNC	ENSG00000164209.17	novel	4745	8	NA	NA	-23	305	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_8	46.874833333037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGGTTAAGCACTTT	110736065	True	NA	30	True	AATAAA	-27	NA	110738983	110763089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203_110761448_110762849
transcript_75997.known	chr5	+	4745	8	FSM	ENSG00000164209.17	ENST00000355943.8	4745	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	15.4219562537921	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTTTCTCCTACT	110736088	True	NA	8	True	AATAAA	-14	NA	110739006	110765157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203
transcript_76.known	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1688	junction_5	2318.84911108938	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
transcript_76000.nic	chr5	+	1779	5	ISM	ENSG00000164209.17	ENST00000447245.6	1575	8	-57	12921	-23	-7688	5prime_fragment	FALSE	canonical	3	150	junction_4	11.7127067751225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAATTGAAGCACAGGG	110736065	True	NA	NA	False	AGTAAA	-11	NA	110738983	110749343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162
transcript_76002.known	chr5	+	6416	23	FSM	ENSG00000134987.13	ENST00000513710.4	6416	23	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_7	27.7236957454291	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTTTACTTTTGTTA	111085116	True	NA	27	True	AATAAA	-16	NA	111092347	111130502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995_111121142_111123804_111123925_111124107_111124190_111125607_111125796_111126733
transcript_76009.known	chr5	+	2411	2	FSM	ENSG00000145777.15	ENST00000379706.4	2411	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAGCATATAAAGTTG	111073068	True	NA	NA	False	AATAAA	-19	NA	111073313	111078024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_111073646_111075945
transcript_76010.nnic	chr5	-	714	2	NNC	ENSG00000248268.1	novel	565	3	NA	NA	-147	-22367	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCGATACTATGTCATATA	NA	False	NA	NA	False	AATAAA	-20	NA	111302714	111299883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_111300094_111302210
transcript_76011.known	chr5	-	803	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	93.7174476818484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATACATTCAAACTTGT	-111507791	True	NA	NA	False	NA	NA	NA	111512562	111499881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
transcript_76016.known	chr5	-	577	6	FSM	ENSG00000164211.13	ENST00000455172.2	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	144.806629682484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATGCTTTTTTTCAGT	-111507741	True	NA	-51	True	TATAAA	-34	NA	111512512	111500987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111501117_111501961_111502089_111505014_111505044_111506329_111506380_111507328_111507443_111512384
transcript_76017.known	chr5	-	1135	5	FSM	ENSG00000164211.13	ENST00000511137.5	1135	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	103.509359480194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAATTTAAAATGTGGAA	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111499401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111507328_111507443_111512384
transcript_76018.known	chr5	-	1467	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	16.5435032565657	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	-111507819	True	NA	NA	False	TTTAAA	-44	NA	111512590	111500146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
transcript_76020.known	chr5	-	3500	5	FSM	ENSG00000164211.13	ENST00000512160.5	3500	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	114.834663756202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAATGAGAATC	-111507764	True	NA	NA	False	TTTAAA	-10	NA	111512535	111496946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111500107_111501085_111501117_111506329_111506380_111507328_111507443_111512390
transcript_76027.known	chr5	-	1186	4	FSM	ENSG00000164211.13	ENST00000509887.5	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	118.133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCACTTTGGGATTT	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111500245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111501117_111506329_111506380_111507328_111507443_111512384
transcript_76030.known	chr5	-	981	4	FSM	ENSG00000164211.13	ENST00000511569.5	981	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	138.386736679817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTATAATATGGTAGTC	-111507764	True	NA	NA	False	AGTAAA	-33	NA	111512535	111500463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111512384
transcript_76036.known	chr5	-	801	5	FSM	ENSG00000134986.14	ENST00000515855.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	652.164089781092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTAGTAGTTTATGT	-111747579	True	NA	NA	False	NA	NA	NA	111757194	111730516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111734669_111734743_111735429_111735508_111755769_111755831_111757135
transcript_76038.known	chr5	-	704	5	FSM	ENSG00000134986.14	ENST00000419114.6	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	615.472328784975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACGTTTACAACCCTT	-111757543	False	NA	70	True	NA	NA	NA	111757555	111730703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757377
transcript_76039.known	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	471.795241603813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	-111754508	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
transcript_7604.nic	chr1	+	1821	7	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	423	junction_3	140.343230054827	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974961	True	NA	22	True	AATAAA	-18	NA	154983348	154993111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990529_154992712_154992787_154992901
transcript_76040.known	chr5	-	475	5	FSM	ENSG00000134986.14	ENST00000508161.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	610.361112375289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTGAACCGCAAGAAGA	-111758191	False	NA	NA	False	NA	NA	NA	111758203	111731026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757931
transcript_76041.known	chr5	-	698	5	FSM	ENSG00000134986.14	ENST00000455559.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	551.696191304598	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCTTGCTTTAGAGAA	NA	False	NA	-32	True	AAGAAA	-11	NA	111758218	111730805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757944
transcript_76045.known	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	127.439746111207	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-111747579	True	NA	-5	True	AATAAA	-20	NA	111757194	111729302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
transcript_76048.known	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	728	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	-111757217	False	NA	NA	False	NA	NA	NA	111757229	111730641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111757135
transcript_76050.known	chr5	-	503	2	FSM	ENSG00000134986.14	ENST00000513684.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGTATATGCTATCC	-111757152	False	NA	NA	False	NA	NA	NA	111757164	111755356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111755831_111757135
transcript_76052.known	chr5	+	3511	3	FSM	ENSG00000224032.8	ENST00000663232.1	3511	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_2	3.5	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGATAACATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112160525	112164818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112161702_112161776_112162150
transcript_76053.known	chr5	+	292	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	70	4	62	1	multi-exon	FALSE	canonical	3	28	junction_1	187	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTGTTTTAAGTGA	112150072	True	NA	17	True	AATAAA	-17	NA	112160933	112162311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112160992_112161702_112161776_112162150
transcript_76054.known	chr5	+	1367	2	FSM	ENSG00000224032.8	ENST00000427306.3	1373	2	0	6	0	-6	multi-exon	FALSE	canonical	3	409	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTTTGGCATTTGTGT	NA	False	NA	8	True	AATAAA	-8	NA	112160528	112162302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112161702
transcript_76056.known	chr5	+	578	2	FSM	ENSG00000224032.8	ENST00000442823.3	605	2	27	0	20	0	multi-exon	FALSE	canonical	2	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGATTAACTGCCAGAA	112150030	True	NA	30	True	AATAAA	-30	NA	112160891	112162324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112162150
transcript_76057.known	chr5	+	2621	3	FSM	ENSG00000224032.8	ENST00000413221.7	2621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATGCAGTCTGAAAG	112150010	True	NA	-3	True	AATAAA	-28	NA	112160871	112164257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112161685_112161776_112162150
transcript_76059.nic	chr5	+	853	5	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	0	8334	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	9.65336728815391	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGGAAAAAGACTG	112705096	True	NA	NA	False	TTTAAA	-42	NA	112707497	112775656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_76065.known	chr5	-	1187	6	FSM	ENSG00000129625.13	ENST00000511865.6	1187	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	405.906590239676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGTTTTTGGAAAATGTA	-112913868	True	NA	57	True	TTTAAA	-21	NA	112922230	112878576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_112878836_112887014_112887184_112892449_112892818_112902379_112902519_112921162_112921257_112922072
transcript_76068.known	chr5	+	937	5	FSM	ENSG00000153037.15	ENST00000282999.7	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	332.835826647313	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGAGAGGAGGGATAAT	112853899	True	NA	44	True	AATAAA	-41	NA	112861304	112867935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867371
transcript_76069.known	chr5	+	2776	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_3	341.547580872709	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAAGGTGCCTGC	112853881	True	NA	NA	False	NA	NA	NA	112861286	112869788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
transcript_76070.known	chr5	+	1850	5	FSM	ENSG00000153037.15	ENST00000391338.3	1850	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	429.877526162976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTTTTGTTCTTAAAAA	112853899	True	NA	NA	False	AATAGA	-34	NA	112861304	112893079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112891602
transcript_76071.known	chr5	-	3008	5	FSM	ENSG00000129625.13	ENST00000379638.9	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	29.0118510267787	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATTTCATTTTATT	-112913865	True	NA	-12	True	AATAAA	-32	NA	112922227	112876384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
transcript_76081.known	chr5	+	1270	4	FSM	ENSG00000153037.15	ENST00000621420.5	1270	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	720.785374127108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	112853919	True	NA	NA	False	AGTAAA	-13	NA	112861324	112868392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864620_112864733_112867403
transcript_76089.known	chr5	+	4679	12	FSM	ENSG00000172795.17	ENST00000674880.1	4679	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	107.374297061361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTATCCTATAGAAAAG	112963521	True	NA	-50	True	TATAAA	-9	NA	112976812	113016649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112981041_112981172_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_76092.known	chr5	+	10110	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	0	0	0	0	multi-exon	FALSE	canonical	2	232	junction_2	31.3502791056156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATATCAAATAACGCAA	112963506	True	NA	3	True	AATAAA	-20	NA	112976797	113022195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_76093.known	chr5	+	1572	9	FSM	ENSG00000172795.17	ENST00000513585.6	1572	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	99.443451267542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTATATTGGAGTTT	112963418	True	NA	-56	True	NA	NA	NA	112976709	113013849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_76094.known	chr5	+	8029	10	FSM	ENSG00000172795.17	ENST00000515408.5	8029	10	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_8	88.5029119978476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGCAAATTATTTTGAG	112963410	True	NA	NA	False	AAAAAG	-25	NA	112976701	113020123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113010755_113010808_113013320
transcript_76095.nnic	chr5	+	1054	3	NIC	ENSG00000172795.17	novel	4679	12	NA	NA	36	5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAGTGTTGTTTTTA	112963454	True	NA	11	True	ATTAAA	-19	NA	112976745	112984656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_112976987_112981041_112981172_112983973
transcript_76097.known	chr5	+	852	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	112963521	True	NA	6	True	ATTAAA	-14	NA	112976812	112984651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112983973
transcript_76098.known	chr5	+	6305	30	FSM	ENSG00000047188.16	ENST00000161863.9	6305	30	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_13	14.1370058570287	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	113511023	True	NA	15	True	ATTAAA	-16	NA	113513693	113595284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302_113593391_113593481
transcript_76100.known	chr5	-	4156	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	10.9149348357714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-115168256	True	NA	-27	True	AATAAA	-37	NA	115169908	115124771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
transcript_76102.known	chr5	-	693	2	FSM	ENSG00000152503.10	ENST00000379618.6	693	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTCTCGCTACAGCT	NA	False	NA	3	True	AATAAA	-26	NA	115180546	115171101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115171223_115179974
transcript_76103.nnic	chr5	-	2593	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	-4	1541	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	87.1526261618867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGGGGGAAAAAGTAAGC	-115258549	True	NA	-30	True	AATAAA	-14	NA	115262881	115210860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_115212308_115212419_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_76104.nnic	chr5	-	2293	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	-4	1326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.400309871146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACTGGTATCACTG	-115258549	True	NA	-13	True	AATAAA	-29	NA	115262881	115211075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_115212304_115212500_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_76106.known	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	28.4316614885588	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-115258545	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_76114.known	chr5	+	944	1	FSM	ENSG00000271797.1	ENST00000606615.1	944	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGACTGCTTGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	115262504	115263448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_115262500_115263400
transcript_76115.known	chr5	-	2069	10	FSM	ENSG00000164221.13	ENST00000395557.4	2069	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	43.3968195910401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATGTTAGAAACATTAT	-115296235	False	1596	NA	False	AATATA	-40	NA	115296268	115267638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115295909
transcript_76116.known	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	18.7978196791904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-115295058	True	NA	-11	True	TATAAA	-19	NA	115296654	115267189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_76118.known	chr5	-	5697	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	9	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	-115542300	True	NA	-3	True	AATAAA	-18	NA	115544775	115520907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115525618_115542949_115543684_115544522
transcript_76122.known	chr5	-	752	6	FSM	ENSG00000129596.5	ENST00000502631.1	752	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.5604175650256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTACTGCAGAAGAAAAG	-115814758	True	NA	NA	False	NA	NA	NA	115816657	115805263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115805463_115806348_115806519_115809621_115809698_115811160_115811316_115813180_115813259_115816583
transcript_76126.known	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	20.2530861845794	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-115816635	False	NA	0	True	AATAAA	-17	NA	115816659	115804732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
transcript_76130.known	chr5	+	1180	7	FSM	ENSG00000177879.17	ENST00000395548.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	505.119045374454	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAATAATTTTTTTTA	115836105	True	NA	40	True	NA	NA	NA	115841996	115914011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_115842107_115852978_115853015_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_76132.known	chr5	+	1276	6	FSM	ENSG00000177879.17	ENST00000316788.12	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	114.305555420548	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	115836043	True	NA	4	True	AATAAA	-22	NA	115841934	115914081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_115842107_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_76134.known	chr5	-	732	6	FSM	ENSG00000145782.13	ENST00000513167.1	732	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	328.633899651268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTTAACAGATGTGATC	-115841521	False	NA	-84	True	NA	NA	NA	115841544	115831719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115840817_115840935_115841389
transcript_76137.nnic	chr5	+	1237	5	NIC	ENSG00000177879.17	novel	1276	6	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_3	503.607672201288	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	115836010	True	NA	4	True	AATAAA	-22	NA	115841901	115914081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_115842107_115866669_115866762_115870016_115870129_115902884_115902993_115913361
transcript_76141.known	chr5	-	1082	5	FSM	ENSG00000145782.13	ENST00000379594.7	1082	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	335.766566977714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCCAAGGTTGA	-115841326	True	NA	30	True	NA	NA	NA	115841837	115831545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115841389
transcript_76142.known	chr5	-	773	5	FSM	ENSG00000145782.13	ENST00000505993.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	330.515128246802	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCCATTGCTCCTACT	-115836324	True	NA	-8	True	CATAAA	-15	NA	115841565	115831583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817_115840935_115841389
transcript_76153.known	chr5	-	4040	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	47.7237420531496	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCTGTTCTTGGAG	-115836324	True	NA	-18	True	AATAAA	-17	NA	115841565	115828199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
transcript_76159.known	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	333.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	-115836324	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115841389
transcript_76163.known	chr5	-	373	1	FSM	ENSG00000185641.6	ENST00000469891.2	373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGAATAGGTCCAACCA	NA	False	NA	NA	False	NA	NA	NA	116052289	116051916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_116051900_116052300
transcript_76164.known	chr5	+	1433	7	FSM	ENSG00000145781.9	ENST00000632434.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_3	79.4804308549525	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAGTGTACATTT	116077988	True	NA	21	True	AATAAA	-17	NA	116085025	116293286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_76169.known	chr5	+	869	7	FSM	ENSG00000145781.9	ENST00000515539.5	869	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	377.436712870148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAGGTTCTAATATAC	116085455	False	NA	NA	False	AATAGA	-15	NA	116085473	116292657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_116085607_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_76175.known	chr5	+	617	3	FSM	ENSG00000248663.7	ENST00000504107.2	931	3	314	0	314	0	multi-exon	FALSE	canonical	3	54	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGCATACATTTACTG	117454595	False	NA	NA	False	AATAAA	-17	NA	117455262	117479368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_117455455_117471901_117471939_117478980
transcript_76179.known	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	21.4610435181724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	119071165	False	NA	5	True	AATAAA	-19	NA	119071204	119133691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_76180.known	chr5	+	11538	44	FSM	ENSG00000172869.15	ENST00000539542.6	11538	44	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_33	23.1328844013174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGGGTATACTATTGT	119068959	True	NA	10	True	AATAAA	-19	NA	119071086	119249127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119206833_119206897_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
transcript_76181.nic	chr5	+	1412	11	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-120	4359	-2	0	5prime_fragment	FALSE	canonical	3	35	junction_1	22.8245481882994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAGCAACTTAGAAA	119068957	True	NA	20	True	AATAAA	-31	NA	119071084	119129332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210
transcript_76184.nic	chr5	+	469	4	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-120	31689	-2	-208	5prime_fragment	FALSE	canonical	3	35	junction_1	28.9865869364129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCAGTAATTTATGAT	119068957	True	NA	NA	False	AAGAAA	-3	NA	119071084	119102002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934
transcript_76186.known	chr5	+	795	2	FSM	ENSG00000145779.8	ENST00000274456.6	795	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGACTGATCATGATT	119267157	True	NA	NA	False	NA	NA	NA	119268691	119393394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119268908_119392815
transcript_76188.known	chr5	+	6976	2	FSM	ENSG00000145779.8	ENST00000504771.3	6976	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATTCATGCTGGTT	119355989	True	NA	10	True	ATTAAA	-20	NA	119356018	119399688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119356122_119392815
transcript_76190.known	chr5	+	2589	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	306.072431514721	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	119436152	True	NA	26	True	AATAAA	-29	NA	119452537	119542269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76194.known	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	344.648369013824	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76196.known	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_8	87.7288096657456	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76199.known	chr5	+	2551	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	294.011656983773	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119452717	False	NA	12	True	AATAAA	-17	NA	119452752	119542332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76200.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	234.084735134824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	119436090	True	NA	-4	True	AATAAA	-1	NA	119452475	119542316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
transcript_76201.known	chr5	+	2563	23	FSM	ENSG00000133835.18	ENST00000682996.1	2563	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	244.218216335479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATACCTTTGTTTTT	119436090	True	NA	-2	True	AATAAA	-3	NA	119452475	119542318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76203.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	242.993623016009	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	119436111	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76210.known	chr5	+	844	5	FSM	ENSG00000133835.18	ENST00000509606.1	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	1099	junction_1	71.1139051100416	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119527127	True	NA	12	True	AATAAA	-17	NA	119527157	119542332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76212.nnic	chr5	+	1682	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	-80744	391	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGCTTATTTGATTT	120700460	False	NA	NA	False	AATAAA	-19	NA	120700473	120791169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_120700940_120789953
transcript_76213.known	chr5	+	2855	8	FSM	ENSG00000151304.6	ENST00000339397.5	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	11.183077594732	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATTCAAGGGATTA	121958432	True	NA	NA	False	GATAAA	-6	NA	121961974	122028633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941
transcript_76216.nic	chr5	+	779	6	ISM	ENSG00000151304.6	ENST00000339397.5	2855	8	-14	8191	-14	-8191	5prime_fragment	FALSE	canonical	3	95	junction_5	11.443775600736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGATCTGATAGCTCAC	121958418	True	NA	-39	True	NA	NA	NA	121961960	122020442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087
transcript_76230.known	chr5	+	6479	15	FSM	ENSG00000205302.7	ENST00000379516.7	6479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	279.838838459218	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGCCTTCTTACTGC	122768590	True	NA	NA	False	AATAAA	-28	NA	122775079	122834543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_76232.known	chr5	+	2119	15	FSM	ENSG00000205302.7	ENST00000514949.1	2119	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	362.31411138144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTGGTTTTATAT	122775190	False	NA	NA	False	AATAAA	-18	NA	122775202	122829755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122775763_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_7624.nnic	chr1	+	575	4	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	221.699997494111	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974944	True	NA	22	True	AATAAA	-18	NA	154983331	154993111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_154983398_154983841_154984067_154992712_154992787_154992901
transcript_76244.known	chr5	+	1050	8	FSM	ENSG00000064652.11	ENST00000395451.8	1050	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	31.4863105984496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACTCTTCTCACCGTGA	122843949	True	NA	NA	False	NA	NA	NA	122845604	123008161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122891026_122891126_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_76245.known	chr5	+	1987	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	14.2643689738531	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	122843957	True	NA	14	True	AATAAA	-16	NA	122845612	123009205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_76247.known	chr5	+	1563	7	FSM	ENSG00000064652.11	ENST00000513881.5	1563	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	31.3882497476719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCCCGCTAGTGGCA	122845392	False	NA	NA	False	AAAAAG	-36	NA	122845517	123008610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002081_123007681
transcript_76250.known	chr5	+	588	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.7462722219517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	122843970	False	NA	3	True	AATAAA	-16	NA	122845625	123002142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
transcript_76252.nnic	chr5	+	1967	6	NIC	ENSG00000064652.11	novel	1987	7	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	34.284690460904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	122845516	True	NA	14	True	AATAAA	-16	NA	122845567	123009205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123007681
transcript_76253.known	chr5	-	1364	5	FSM	ENSG00000168938.6	ENST00000306442.5	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	14.148763196831	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGCCCATCCACATC	-123033828	True	NA	NA	False	TATAAA	-31	NA	123036725	123023249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
transcript_76258.nnic	chr5	+	347	2	FSM	ENSG00000289458.1	ENST00000685834.1	356	2	4	5	4	-5	multi-exon	FALSE	canonical	3	311	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCCATGTAATTTTG	124496516	True	NA	16	True	AATAAA	-30	NA	124497324	124505105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_124497592_124505025
transcript_76260.known	chr5	+	1847	15	FSM	ENSG00000155324.10	ENST00000513978.5	1847	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	27.0004724070539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTCTTAACGACTTTCAA	126422264	True	NA	NA	False	NA	NA	NA	126423471	126493326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_76261.known	chr5	+	2905	14	FSM	ENSG00000155324.10	ENST00000285689.8	2905	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	10.8376944643118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGACAATG	126422201	True	NA	NA	False	AAGAAA	-26	NA	126423408	126494364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_126423690_126465425_126465546_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_76269.known	chr5	-	2501	19	FSM	ENSG00000164904.18	ENST00000636879.1	2501	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	219.62290914707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTTTACCAAAAAATAC	-126582412	True	NA	NA	False	NA	NA	NA	126595219	126544149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582104_126582150_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_7627.known	chr1	+	1803	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	219.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	154974979	True	NA	18	True	AATAAA	-18	NA	154983366	154989012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154983398_154983841_154984067_154987465
transcript_7628.nic	chr1	+	1321	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-149	4099	-128	0	5prime_fragment	FALSE	canonical	3	474	junction_1	190	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	154983172	False	NA	18	True	AATAAA	-18	NA	154983209	154989012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_154983398_154983841_154984067_154988104
transcript_76280.known	chr5	-	2554	18	FSM	ENSG00000164904.18	ENST00000637272.1	2554	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	174.137916149328	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGCAGTGAGCCTAGA	-126582412	True	NA	NA	False	NA	NA	NA	126595219	126544042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559326_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76281.known	chr5	-	2639	18	FSM	ENSG00000164904.18	ENST00000636808.1	2639	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	173.333249046204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGTCTTTACCAAAAAA	-126595349	False	NA	NA	False	NA	NA	NA	126595362	126544152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
transcript_76298.known	chr5	-	2332	16	FSM	ENSG00000164904.18	ENST00000636743.1	2332	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	184.273299446471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCGTCTTTACCAAAAA	-126582412	True	NA	NA	False	NA	NA	NA	126595219	126544153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126595006
transcript_76299.known	chr5	-	2466	16	FSM	ENSG00000164904.18	ENST00000637206.1	2466	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	184.738686317247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACAGTGAGATCCTG	-126595256	False	NA	NA	False	NA	NA	NA	126595269	126544009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_7630.known	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	413.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	154975043	False	NA	NA	False	NA	NA	NA	154983430	154988433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154983634_154983841_154984067_154988104
transcript_76300.known	chr5	-	1935	16	FSM	ENSG00000164904.18	ENST00000553117.5	1935	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	180.300736425439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCCTGACCAAGTG	-126595323	False	NA	NA	False	AATACA	-39	NA	126595336	126544595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76303.known	chr5	-	2321	15	FSM	ENSG00000164904.18	ENST00000636886.1	2321	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	190.739698681374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGGGAGGCTGAGGC	-126582418	True	NA	NA	False	AATACA	-40	NA	126595225	126544089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126595006
transcript_76306.known	chr5	-	1126	10	FSM	ENSG00000164904.18	ENST00000413020.6	1126	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	197.251108995615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTACATGGTGAAACTC	-126582411	True	NA	NA	False	NA	NA	NA	126595218	126564357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126564593_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76319.known	chr5	+	3609	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	52.5327278941423	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	126593969	True	NA	45	True	AATAAA	-24	NA	126600946	126627252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
transcript_76327.known	chr5	-	3946	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.8282039138539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTGTCTTTCATTG	-127029962	True	NA	NA	False	AATAAA	-20	NA	127030558	126867713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
transcript_7633.known	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_2	144.019288831585	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974956	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_76332.nic	chr5	-	1106	4	NIC	ENSG00000173926.6	novel	764	4	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	23.4426012966897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTACTCATTATTTC	-127030016	True	NA	NA	False	AAGAAA	-7	NA	127030612	126898872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_126899267_126914929_126915135_126917983_126918228_127030349
transcript_76333.known	chr5	-	2977	6	FSM	ENSG00000164241.14	ENST00000508527.5	2977	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	19.7524682002022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAAGAAAACA	-127073041	True	NA	NA	False	AAGAAA	-41	NA	127073480	127045358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127047916_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_76334.known	chr5	-	600	6	FSM	ENSG00000164241.14	ENST00000682830.1	600	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	19.0850727009357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTGACTGATGCCCTC	-127073053	True	NA	NA	False	AAAACA	-29	NA	127073492	127051779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127051948_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_76335.known	chr5	-	3017	5	FSM	ENSG00000164241.14	ENST00000535381.6	3017	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.2534243362718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTGTTTTAAGC	-127073067	True	NA	NA	False	NA	NA	NA	127073506	127045234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127047916_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_76336.known	chr5	-	976	5	FSM	ENSG00000164241.14	ENST00000296662.10	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	16.872685026397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCATGAAGCCTATTC	-127073063	True	NA	NA	False	AATAAA	-19	NA	127073502	127051303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127051948_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_76337.nic	chr5	-	1762	5	ISM	ENSG00000164241.14	ENST00000508527.5	2977	6	-35	5947	-9	-2	5prime_fragment	FALSE	canonical	2	19	junction_2	19.7151591421424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCTGCATGAAGCCTAT	-127073076	True	NA	NA	False	AATAAA	-17	NA	127073515	127051305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_76340.known	chr5	-	553	4	FSM	ENSG00000164241.14	ENST00000509733.7	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	12.2292908852294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTAGCAGGTGCAGCAT	-127073053	True	NA	NA	False	NA	NA	NA	127073492	127052381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127052670_127058881_127059003_127071583_127071686_127073450
transcript_76341.nic	chr5	-	1124	3	ISM	ENSG00000164241.14	ENST00000509733.7	553	4	-23	5664	-9	707	5prime_fragment	FALSE	canonical	3	46	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAATAAAGATACCT	-127073076	True	NA	NA	False	AATAAA	-15	NA	127073515	127058045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_127059003_127071583_127071686_127073450
transcript_76347.known	chr5	+	4664	9	FSM	ENSG00000164244.21	ENST00000296666.13	4664	9	0	0	0	0	multi-exon	TRUE	canonical	3	367	junction_8	35.1567916624939	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	127508299	True	NA	17	True	AATAAA	-20	NA	127517639	127555085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_76352.known	chr5	+	2726	10	FSM	ENSG00000164244.21	ENST00000512635.2	2726	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	132.589126791038	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAAAGTTGTATAGCGA	127508315	True	NA	13	True	AATAAA	-16	NA	127517655	127555081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706_127551879_127553796
transcript_76353.nnic	chr5	+	737	5	NNC	ENSG00000230561.6	novel	916	7	NA	NA	13140	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.48746859276655	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAGGTAAAGTCTGAT	127752635	True	NA	NA	False	AATAAA	-14	NA	127752677	127941504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_127752795_127754267_127754376_127797102_127797235_127798105_127798163_127941181
transcript_76357.nic	chr5	-	934	3	FSM	ENSG00000245937.9	ENST00000687795.1	1510	3	4	572	1	94	multi-exon	FALSE	canonical	2	6	junction_1	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTGTGTGACCCGATTT	-128082783	True	NA	NA	False	AATAAA	-21	NA	128083093	127966454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127966929_128061143_128061245_128082734
transcript_7636.nnic	chr1	+	1371	5	NNC	ENSG00000243364.8	novel	1254	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	53.255868221258	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	155061031	True	NA	35	True	AATAAA	-29	NA	155063741	155069553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_155063937_155064441_155064561_155066729_155067017_155067371_155067441_155068852
transcript_76360.known	chr5	+	2863	10	FSM	ENSG00000113396.13	ENST00000262462.9	2863	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.76095228569523	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	128965163	True	NA	10	True	AATAAA	-20	NA	128965487	129033635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_76361.known	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	23.2969955144435	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	129089852	True	NA	6	True	ATTAAA	-15	NA	129094748	129114028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
transcript_76369.known	chr5	+	6219	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	131169813	True	NA	15	True	AATAAA	-25	NA	131170943	131205428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
transcript_7637.known	chr1	+	1254	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	6.18241233033047	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	155061029	True	NA	35	True	AATAAA	-29	NA	155063739	155069553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
transcript_76373.known	chr5	-	1032	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2050.93349173005	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	-131133201	True	NA	-6	True	AATAAA	-26	NA	131165349	131159284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
transcript_76376.known	chr5	+	317	4	FSM	ENSG00000186687.16	ENST00000507584.1	317	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	65.3214274866134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGCAAAAGTCCTGGAAA	131169858	True	NA	NA	False	AATACA	-38	NA	131170988	131199653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131199530
transcript_7638.known	chr1	+	1052	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	39.0754256392543	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061050	True	NA	20	True	AATAAA	-14	NA	155063760	155069538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
transcript_76382.known	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2235.65923660611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-131133153	True	NA	-9	True	AATAAA	-23	NA	131165301	131159287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
transcript_76388.known	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2235.93738731656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-131133177	True	NA	-13	True	AATAAA	-19	NA	131165325	131159291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
transcript_7639.nic	chr1	+	1750	4	ISM	ENSG00000143590.14	ENST00000368408.4	1817	5	6088	0	-591	0	3prime_fragment	FALSE	canonical	3	128	junction_1	19.6185852927496	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	155084027	False	NA	NA	False	AATAAA	-17	NA	155084924	155087538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_155085405_155085876_155085943_155086127_155086206_155086412
transcript_76390.known	chr5	+	604	3	FSM	ENSG00000186687.16	ENST00000510516.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	70	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAATTATTACATTTAAA	131169813	True	NA	NA	False	NA	NA	NA	131170943	131199966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131171039_131180094_131180168_131199530
transcript_76392.known	chr5	-	3080	3	FSM	ENSG00000169567.13	ENST00000675372.1	3080	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	2022	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGTACAAATGATAGT	-131133185	True	NA	NA	False	AATAAA	-2	NA	131165333	131156910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131162571_131162677_131165059
transcript_76393.known	chr5	-	852	3	FSM	ENSG00000169567.13	ENST00000304043.10	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	4376	junction_1	194.5	3769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATAGGAAATTGACCA	-131133108	True	NA	NA	False	NA	NA	NA	131165256	131159026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131162571_131162677_131165094
transcript_76395.nnic	chr5	+	1600	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-14	-532	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_5	28.5475042692001	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTGTTGTAAATGTT	131261723	True	NA	11	True	AATAAA	-25	NA	131264038	131392574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_76396.nnic	chr5	+	2135	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_5	28.5475042692001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCAATTCAAGCCTAT	131261723	True	NA	7	True	ATTAAA	-17	NA	131264038	131393109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_76397.nnic	chr5	+	3693	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	145	junction_5	28.5475042692001	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	131261723	True	NA	18	True	AATAAA	-14	NA	131264038	131394667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_76398.known	chr5	+	3591	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	72.9783529548317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTAGTTTTTCTTTT	131261759	True	NA	41	True	AATAAA	-37	NA	131264074	131394690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_7640.known	chr1	+	776	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.937244225282	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCCCATTGCTCTCCTC	155085231	True	NA	NA	False	NA	NA	NA	155085521	155086923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
transcript_76404.known	chr5	+	4404	5	FSM	ENSG00000158985.14	ENST00000505065.2	4404	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	19.7863589374094	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTTCCTTTAAATT	131261737	True	NA	23	True	AATAAA	-19	NA	131264052	131394672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992
transcript_76405.known	chr5	+	2025	6	FSM	ENSG00000158985.14	ENST00000503291.5	2025	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	90.9571327604383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGTCCAATTCAAGCC	131261752	True	NA	4	True	ATTAAA	-14	NA	131264067	131393106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131264167_131315975_131316145_131359208_131359559_131385542_131385645_131390992_131391109_131391917
transcript_76406.known	chr5	-	3107	18	FSM	ENSG00000158987.22	ENST00000510071.5	3107	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	7.70610686695835	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTCCTTACTCTGGT	-131632299	True	NA	NA	False	AATAAA	-20	NA	131635231	131463614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_76407.nnic	chr5	-	1060	3	NNC	ENSG00000217128.13	novel	6388	17	NA	NA	-59	54281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTCAGAACTCATT	-131794979	True	NA	NA	False	AATAAA	-17	NA	131797076	131741326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_131742013_131744563_131744691_131796829
transcript_76408.known	chr5	-	1373	1	FSM	ENSG00000217128.13	ENST00000623690.1	1373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTCTTTAAACATT	-131794883	True	NA	NA	False	AATAAA	-14	NA	131796980	131795607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131795600_131797000
transcript_76409.known	chr5	-	1720	13	FSM	ENSG00000217128.13	ENST00000511848.1	1720	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.58287544405155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAAGCATCTCTGCTTT	-131794919	True	NA	NA	False	AATAAA	-23	NA	131797016	131677596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_76411.known	chr5	-	2230	16	FSM	ENSG00000072682.20	ENST00000166534.8	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.8797042083956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226488	True	NA	0	True	AATAAA	-24	NA	132227857	132192609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_76412.nic	chr5	-	2271	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	35.1917919723083	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132227857	False	NA	0	True	AATAAA	-24	NA	132227904	132192609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_76413.known	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	40.1161646554935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226450	True	NA	0	True	AATAAA	-24	NA	132227819	132192609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
transcript_76414.known	chr5	-	4553	15	FSM	ENSG00000072682.20	ENST00000379104.7	4553	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.7601893294119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-132226484	True	NA	0	True	ATTAAA	-16	NA	132227853	132190146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_76416.known	chr5	-	4547	15	FSM	ENSG00000072682.20	ENST00000360568.8	4547	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	33.2290289859174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-132226484	True	NA	0	True	ATTAAA	-16	NA	132227853	132190146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_76418.known	chr5	-	733	2	FSM	ENSG00000233006.8	ENST00000457998.2	733	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTATGATAGAAGAAAG	-132369530	True	NA	NA	False	NA	NA	NA	132369648	132366280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132366782_132369416
transcript_76420.nnic	chr5	+	2256	12	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-59	51425	-12	-844	5prime_fragment	FALSE	canonical	3	110	junction_4	16.6886906824417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAAGAGCAGTTGTCC	132551696	True	NA	NA	False	AATAAA	-26	NA	132556917	132594924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868
transcript_76422.known	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.91578004149024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	-132490335	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_76423.known	chr5	-	1216	9	FSM	ENSG00000125347.15	ENST00000680903.1	1216	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.36396103067893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATGGGGCCTCCCTCCT	-132490339	True	NA	NA	False	NA	NA	NA	132490777	132483827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_76424.known	chr5	+	942	4	FSM	ENSG00000197536.11	ENST00000378953.8	942	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTATCTCCAGTACTG	132410620	False	NA	NA	False	AATAAA	-21	NA	132410635	132476044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132411042_132419822_132419941_132449649_132449690_132475666
transcript_76425.known	chr5	+	8272	25	FSM	ENSG00000113522.14	ENST00000378823.8	8272	25	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	19.639812173802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTTTCTCCCAGAACT	132551755	True	NA	17	True	AATAAA	-26	NA	132556976	132646349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
transcript_76426.nic	chr5	+	2563	13	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-50	50581	-3	0	5prime_fragment	TRUE	canonical	3	110	junction_4	16.1010265373223	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCGGCGTGATGAAA	132551705	True	NA	NA	False	GATAAA	-33	NA	132556926	132595768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572
transcript_76428.known	chr5	-	6325	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	9.7459927662604	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTAGTGGTCTGCTGC	NA	False	NA	-4	True	AATAAA	-18	NA	132737638	132692627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_7643.known	chr1	+	763	3	FSM	ENSG00000143590.14	ENST00000470294.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCACTGCCTGCTGCTTC	155085225	True	NA	NA	False	NA	NA	NA	155085515	155086982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155085643_155085876_155085943_155086412
transcript_76431.known	chr5	-	3266	18	FSM	ENSG00000131437.16	ENST00000378735.5	3266	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	13.0378740279829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTATTGGGTAATCC	-132736452	True	NA	NA	False	AATAAA	-16	NA	132737572	132695629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132706450_132706460_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_76432.known	chr5	+	1573	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	4175	junction_1	721	2987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	132851262	True	NA	NA	False	AATAAA	-19	NA	132866641	132868847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132866688_132866868_132867036_132867487
transcript_76433.known	chr5	+	509	2	FSM	ENSG00000164405.11	ENST00000480372.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGTGATGATAGTTGCA	132851277	True	NA	NA	False	NA	NA	NA	132866656	132867342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132866692_132866868
transcript_76434.known	chr5	+	258	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	132851262	True	NA	24	True	AATAAA	-29	NA	132866641	132867699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132866688_132867487
transcript_76435.known	chr5	+	586	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	5617	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	132851266	True	NA	8	True	AATAAA	-13	NA	132866645	132867683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132867036_132867487
transcript_7644.known	chr1	+	1096	4	FSM	ENSG00000243364.8	ENST00000359751.8	1096	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	48.8898989794643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061026	True	NA	20	True	AATAAA	-14	NA	155063736	155069538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068998
transcript_76442.known	chr5	-	2189	5	FSM	ENSG00000155329.12	ENST00000509437.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	114.009867993959	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	-133021682	True	NA	-4	True	AATAAA	-29	NA	133026549	132996984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_76443.known	chr5	-	794	5	FSM	ENSG00000155329.12	ENST00000513541.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	115.354616292544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTTTATTTGAAGGGT	-133021682	True	NA	NA	False	NA	NA	NA	133026549	132998407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133022840_133022907_133026496
transcript_7645.known	chr1	+	1552	5	FSM	ENSG00000169242.12	ENST00000368407.8	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.35410196624968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGCTAAGTGCGAGGC	155127476	True	NA	72	True	ATTAAA	-16	NA	155127875	155134899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155128070_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_76451.known	chr5	-	2178	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	23.3285709425636	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	-133021737	True	NA	-4	True	AATAAA	-29	NA	133026604	132996984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
transcript_76452.known	chr5	-	608	4	FSM	ENSG00000155329.12	ENST00000509008.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	121.444088644391	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATTTAGAATATGTTA	-133021682	True	NA	NA	False	AAAACA	-18	NA	133026549	132998527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133026496
transcript_76459.known	chr5	-	876	3	FSM	ENSG00000155329.12	ENST00000513848.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	139.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCTAATGCTTTT	-133021704	True	NA	-123	True	NA	NA	NA	133026571	132998211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133006758_133006921_133026496
transcript_7646.known	chr1	+	1444	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	17.9071680247511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	155127476	True	NA	30	True	AATAAA	-19	NA	155127875	155134857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
transcript_76463.known	chr5	-	325	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	37	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGTGGATATTTT	-133021722	True	NA	NA	False	AATAAA	-13	NA	133026589	133019037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133019204_133022840_133022907_133026496
transcript_76464.known	chr5	-	2160	5	FSM	ENSG00000155329.12	ENST00000355372.6	2160	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.103767933119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTAAACTTCTGTTA	-133021682	True	NA	-15	True	AATAAA	-18	NA	133026549	132996995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998833_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_76465.known	chr5	-	829	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGATTTGTCGTTT	-133051778	True	NA	0	True	NA	NA	NA	133051893	133051064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133051100_133051900
transcript_76467.known	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1376	junction_6	150.270589271487	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	133020091	True	NA	16	True	AATAAA	-23	NA	133052012	133106449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
transcript_7648.known	chr1	+	1298	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	77.8372661390417	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	155132158	True	NA	7	True	AATAAA	-19	NA	155135851	155138853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_76486.known	chr5	-	2188	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	18	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-133960226	True	NA	-9	True	AATAAA	-20	NA	133968625	133955509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133956991_133959493_133960021_133968445
transcript_76487.nic	chr5	-	2108	3	NIC	ENSG00000113583.8	novel	2188	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	231	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-133960226	True	NA	-9	True	AATAAA	-20	NA	133968625	133955509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_133956991_133959493_133960021_133968525
transcript_7649.known	chr1	+	890	6	FSM	ENSG00000169241.19	ENST00000488609.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	153.899967511368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTGGGGCCTAGGA	155132173	True	NA	NA	False	GATAAA	-28	NA	155135866	155138440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136397_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_76491.known	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_8	482.883008605604	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-133969308	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
transcript_76494.known	chr5	-	1873	9	FSM	ENSG00000213585.11	ENST00000395047.6	1873	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	247.331761001292	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTTAAAAAACTTGAAT	-134004829	False	NA	-43	True	NA	NA	NA	134004842	133971951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
transcript_76495.known	chr5	-	1839	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	683.237593648798	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTAGATTTATTTT	-134004962	False	NA	-15	True	AATAAA	-17	NA	134004975	133971870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
transcript_76509.known	chr5	-	802	7	FSM	ENSG00000113558.19	ENST00000522855.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	3101.07886692501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAACCTTACGGCCA	-134123014	True	NA	-54	True	NA	NA	NA	134176950	134157571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176854
transcript_7651.known	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	142.317207322235	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	155132156	True	NA	6	True	AATAAA	-18	NA	155135849	155138852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
transcript_7652.known	chr1	+	778	5	FSM	ENSG00000169241.19	ENST00000490276.5	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	154.943538103401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCAAAGAAAAAGCTTTAC	155132134	True	NA	NA	False	GATAAA	-3	NA	155135827	155138415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138161
transcript_76521.known	chr5	-	9386	6	FSM	ENSG00000113558.19	ENST00000353411.11	9386	6	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_2	204.604594278819	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTTTAAAAAGTGG	-134123014	True	NA	-11	True	AATAAA	-37	NA	134176950	134148934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_7653.known	chr1	+	1166	5	FSM	ENSG00000169241.19	ENST00000650403.1	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	114.180504027614	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132164	True	NA	5	True	AATAAA	-17	NA	155135857	155138851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_76536.known	chr5	-	1683	5	FSM	ENSG00000113558.19	ENST00000522552.5	1683	5	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_1	212.073542668575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTTATTCATGAGT	-134123028	True	NA	95	True	AATAAA	-41	NA	134176964	134157337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_76541.nic	chr5	-	844	5	ISM	ENSG00000006837.12	ENST00000519312.5	1198	9	4	21573	0	-10	5prime_fragment	TRUE	canonical	2	5	junction_4	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGCCATTTACTGAGT	-134370822	True	NA	-10	True	ATTAAA	-7	NA	134371043	134308010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_134308467_134312291_134312381_134319357_134319498_134321790_134321904_134370997
transcript_76545.known	chr5	+	2241	6	FSM	ENSG00000119048.8	ENST00000265339.7	2241	6	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_1	9.04654630231891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTATAGACATTCA	134369552	True	NA	NA	False	AAAAAG	-39	NA	134371568	134392108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388324_134388414_134390224
transcript_76549.known	chr5	+	235	2	FSM	ENSG00000119048.8	ENST00000504431.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGATAAATTAGAAAAAAA	134369589	False	NA	NA	False	ACTAAA	-5	NA	134371605	134374583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134371640_134374382
transcript_76551.known	chr5	+	644	6	FSM	ENSG00000119048.8	ENST00000507277.1	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	86.9551608589162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGTATTTTTTTCC	134369587	False	NA	5	True	CATAAA	-12	NA	134371603	134390573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388351_134388414_134390224
transcript_76552.nnic	chr5	-	763	4	NNC	ENSG00000237190.4	novel	1228	3	NA	NA	-38	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	403.017231503678	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTTGTTGTTGATGT	-134395197	True	NA	-81	True	AATAAA	-16	NA	134411919	134402086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_134402130_134402610_134402927_134409902_134410003_134411615
transcript_76553.known	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	23	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-134395159	True	NA	-59	True	AATAAA	-38	NA	134411881	134402064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134402927_134409902_134410003_134411615
transcript_76556.known	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-134395159	True	NA	-11	True	AATAAA	-17	NA	134411881	134410548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134411083_134411615
transcript_76557.known	chr5	+	2700	13	FSM	ENSG00000113615.13	ENST00000322887.8	2700	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	37.8303963617735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTTCTTGCTTTGT	134645200	True	NA	6	True	AATAAA	-16	NA	134648823	134693698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693030
transcript_76559.known	chr5	-	929	8	FSM	ENSG00000152700.14	ENST00000439578.5	929	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	118.187329684527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTGAAAACTGATTC	-134630010	True	NA	NA	False	ATTAAA	-16	NA	134632774	134606801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632076_134632196_134632727
transcript_7656.known	chr1	+	1003	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	158.34421015272	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132165	True	NA	5	True	AATAAA	-17	NA	155135858	155138851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
transcript_76562.known	chr5	-	6517	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	31.4572019664107	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTGTCAAGTTCCATT	-134630064	True	NA	-1	True	AATAAA	-23	NA	134632828	134601148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
transcript_76564.known	chr5	+	6389	23	FSM	ENSG00000113615.13	ENST00000398844.7	6389	23	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_8	21.8579656225602	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTGACTAGTTATTT	134645161	True	NA	14	True	AATAAA	-20	NA	134648784	134727909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693726_134693934_134697125_134697247_134697898_134698058_134703758_134703933_134705326_134705438_134708712_134708889_134715023_134715162_134718068_134718174_134720997_134721091_134723566_134723671_134724979
transcript_76565.known	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	7.78888096369861	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	134734107	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
transcript_7657.nic	chr1	+	1358	3	NIC	ENSG00000169241.19	novel	1003	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	64	junction_1	187	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132117	True	NA	5	True	AATAAA	-17	NA	155135810	155138851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155136377_155137978_155138099_155138179
transcript_76570.nnic	chr5	+	1378	3	NIC	ENSG00000164615.6	novel	2027	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	87	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	134734054	True	NA	15	True	AATAAA	-16	NA	134738494	134751377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_134738793_134741062_134741524_134750758
transcript_76572.known	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	85	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	134734142	True	NA	15	True	AATAAA	-16	NA	134738582	134751377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134743986_134744053_134750758
transcript_76574.known	chr5	+	3614	2	FSM	ENSG00000164615.6	ENST00000678434.1	3614	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATTCCAGCTACTC	134734072	True	NA	NA	False	AATACA	-27	NA	134738512	134744396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134741062
transcript_76576.known	chr5	+	1470	2	FSM	ENSG00000164615.6	ENST00000676829.1	1470	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTACAGGCGTGAGCCAC	134734074	True	NA	NA	False	NA	NA	NA	134738514	134751950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134750758
transcript_7658.known	chr1	+	1245	5	FSM	ENSG00000169241.19	ENST00000622581.4	1245	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	173.046958944675	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCATTCTCTACTCAT	155132118	True	NA	11	True	AATAAA	-23	NA	155135811	155138857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135973_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_76582.known	chr5	+	3821	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	0	0	0	multi-exon	FALSE	canonical	2	223	junction_19	110.337620492141	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTTTTTTGCATTTC	134738040	True	NA	13	True	AGTAAA	-13	NA	134758803	134829296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_7659.known	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	-155138148	True	NA	-21	True	ATTAAA	-20	NA	155140531	155139890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155140246_155140490
transcript_76596.nic	chr5	+	726	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-104	55561	-71	-4159	5prime_fragment	FALSE	canonical	3	501	junction_4	59.7426773755579	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAGTAGAAAAA	134758651	True	NA	3	True	AAGAAA	-10	NA	134758699	134773735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_76597.nic	chr5	+	799	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-104	55488	-71	-4086	5prime_fragment	FALSE	canonical	3	501	junction_4	59.7426773755579	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCGAAGAGATGAAAC	134758651	True	NA	19	True	AAAAAG	-30	NA	134758699	134773808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_76599.nic	chr5	+	556	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-28	58351	-3	-6949	5prime_fragment	FALSE	canonical	3	518	junction_1	58.116740751315	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAAAAGACAAAGA	134738012	True	NA	-23	True	NA	NA	NA	134758775	134770945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_7660.known	chr1	-	486	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	NA	False	NA	-21	True	ATTAAA	-20	NA	155140595	155139890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155140272_155140490
transcript_76600.known	chr5	+	5083	2	FSM	ENSG00000181904.9	ENST00000394976.4	5083	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTTTACTATGTTTTT	134843391	True	NA	19	True	AATAAA	-19	NA	134845967	134859735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134846213_134854897
transcript_76601.nic	chr5	+	2148	6	NIC	ENSG00000113621.15	novel	3090	5	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	48.7672020932101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	134871045	True	NA	24	True	TATAAA	-18	NA	134874277	134901511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900155_134901065
transcript_76602.known	chr5	+	3090	5	FSM	ENSG00000113621.15	ENST00000358387.9	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	15.7062885494951	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	134871138	True	NA	6	True	AATAAA	-17	NA	134874370	134901635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_76603.known	chr5	+	1006	4	FSM	ENSG00000113621.15	ENST00000511070.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.2989033797144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTTAAGGAAACCCTTG	134871138	True	NA	NA	False	NA	NA	NA	134874370	134900039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134874531_134893491_134893656_134896293_134896425_134899488
transcript_76604.known	chr5	+	518	3	FSM	ENSG00000113621.15	ENST00000509954.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGTATTGCAATAAGCAAA	134893608	False	NA	18	True	TATAAA	-24	NA	134893625	134899857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134893656_134896305_134896425_134899488
transcript_76605.nnic	chr5	+	667	5	NNC	ENSG00000132570.15	novel	2365	4	NA	NA	-4	1662	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	53.8858747725227	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTTGTTCTTTTTCTCT	134903386	True	NA	12	True	NA	NA	NA	134905115	134960757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_134905224_134910334_134910467_134921941_134922116_134959039_134959121_134960585
transcript_76608.known	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	10.6144555520604	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	134903401	True	NA	13	True	ATTAAA	-17	NA	134905130	134962644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
transcript_76614.known	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	305.193381317485	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	-135389281	True	NA	9	True	NA	NA	NA	135399211	135334409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76615.known	chr5	-	2789	9	FSM	ENSG00000113648.17	ENST00000511689.6	1917	9	-391	-481	262	481	multi-exon	FALSE	canonical	3	288	junction_5	144.790365701589	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGCGTGGAGCTTTC	-135399578	False	NA	NA	False	NA	NA	NA	135399622	135333899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76618.known	chr5	-	1314	9	FSM	ENSG00000113648.17	ENST00000510038.1	1314	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	247.296380887388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCACTCCTACTGGG	-135399840	True	NA	NA	False	AAGAAA	-8	NA	135399884	135334912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399785
transcript_7662.known	chr1	-	804	8	FSM	ENSG00000185499.17	ENST00000368390.7	804	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.10077145554495	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	-155192795	False	NA	NA	False	NA	NA	NA	155192867	155186122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192284_155192785
transcript_76622.known	chr5	-	1772	8	FSM	ENSG00000113648.17	ENST00000360597.8	1772	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	265.717818716912	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGAGTTGATTTAGT	-135389292	True	NA	2	True	NA	NA	NA	135399222	135334416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76625.nic	chr5	-	867	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	0	-122	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	264.214761131925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAGTTAACTAATAT	-135389281	True	NA	-8	True	AATAAA	-28	NA	135399211	135359843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_135359943_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76627.nic	chr5	-	870	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	0	-122	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	283.384826693315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAGTTAACTAATAT	-135389281	True	NA	-8	True	AATAAA	-28	NA	135399211	135359843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76628.known	chr5	-	924	5	FSM	ENSG00000113648.17	ENST00000423969.6	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	290.826731061641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATAAGGCTTTGGTT	-135389299	True	NA	NA	False	NA	NA	NA	135399229	135334855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135388921_135389127_135399061
transcript_76629.known	chr5	-	966	6	FSM	ENSG00000113648.17	ENST00000508785.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.79312449409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATATTTTTTGTTCC	-135389247	True	NA	NA	False	NA	NA	NA	135399177	135359396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135359629_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76630.known	chr5	-	861	6	FSM	ENSG00000113648.17	ENST00000507868.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	289.78502376762	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTGCTGCCGAGTGT	-135389274	True	NA	NA	False	NA	NA	NA	135399204	135350813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135350914_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_76632.known	chr5	+	2712	17	FSM	ENSG00000120708.17	ENST00000442011.7	2712	17	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_6	5.66237582645306	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGTGTGCATGGTACA	136028517	True	NA	NA	False	AATAAA	-15	NA	136028987	136063818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136029190_136033762_136033862_136044057_136044123_136046334_136046496_136046850_136047016_136047273_136047421_136049438_136049581_136052906_136053120_136053942_136054081_136054715_136054862_136055679_136055817_136056664_136056796_136059089_136059215_136060833_136060937_136061499_136061580_136062662_136062688_136063185
transcript_76633.known	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	45.6302799572783	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	136129890	True	NA	11	True	AATAAA	-13	NA	136132844	136182733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_76637.known	chr5	+	6937	7	FSM	ENSG00000113658.18	ENST00000545620.5	6937	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	45.879068090894	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTGTCTTTTTTTGTT	136129892	True	NA	12	True	AATAAA	-14	NA	136132846	136182734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_76639.nic	chr5	+	1542	6	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-9	9904	-9	0	5prime_fragment	FALSE	canonical	3	98	junction_1	52.3243729059413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	136129881	True	NA	7	True	AATAAA	-18	NA	136132835	136172829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433
transcript_76641.nic	chr5	+	1453	5	ISM	ENSG00000113658.18	ENST00000545620.5	6937	7	3	9905	3	0	5prime_fragment	FALSE	canonical	3	84	junction_1	55.1424292174366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	136129895	True	NA	7	True	AATAAA	-18	NA	136132849	136172829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433
transcript_76645.known	chr5	-	1816	2	FSM	ENSG00000164621.5	ENST00000297163.3	1816	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGTGTTATTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	136134890	136129506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_136129782_136133349
transcript_76646.nnic	chr5	-	634	3	Antisense	novelGene_ENSG00000213568.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTCTGGTGTCCTTTC	-136448266	True	NA	-3	True	ATTAAA	-18	NA	136448375	136418242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_136418633_136430875_136431060_136448315
transcript_76649.known	chr5	+	781	3	FSM	ENSG00000249803.6	ENST00000660537.1	781	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465942	True	NA	27	True	AATAAA	-39	NA	136466700	136521145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136466886_136520174_136520275_136520649
transcript_76650.known	chr5	+	688	3	FSM	ENSG00000249803.6	ENST00000657590.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465937	True	NA	27	True	AATAAA	-39	NA	136466695	136521145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136466886_136520174_136520275_136520747
transcript_76652.known	chr5	+	1280	3	FSM	ENSG00000249803.6	ENST00000511165.6	1280	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGTGTGTTGTTCACA	136465918	True	NA	NA	False	AATAAA	-29	NA	136466676	136509632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136466886_136504599_136504694_136508655
transcript_76655.known	chr5	+	1180	2	FSM	ENSG00000249803.6	ENST00000665110.1	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465918	True	NA	27	True	AATAAA	-39	NA	136466676	136521145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136466886_136520174
transcript_76657.known	chr5	+	913	2	FSM	ENSG00000249803.6	ENST00000659712.1	913	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTATGTGTCTGGCT	136466101	False	NA	NA	False	AATAAA	-16	NA	136466859	136504801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136466886_136503914
transcript_76659.nnic	chr5	+	1727	4	Fusion	ENSG00000250284.3_ENSG00000249803.6	novel	1280	3	NA	NA	0	-512	multi-exon	FALSE	canonical	3	20	junction_3	4.98887651569859	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTGCTTACCTATCTT	136465918	True	NA	6	True	ATTAAA	-22	NA	136466676	136755619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_+_136466886_136600742_136600843_136753814_136753973_136754359
transcript_76661.nnic	chr5	-	1369	7	NNC	ENSG00000146021.15	novel	423	4	NA	NA	-8	328	intron_retention	FALSE	canonical	2	4	junction_1	11.513277359447	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCATGACTGCTA	-137735948	False	NA	NA	False	AATAAA	-15	NA	137736023	137677088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_137677445_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_76664.known	chr5	-	4275	3	FSM	ENSG00000250159.7	ENST00000508281.3	4275	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137889394	137879723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_137883622_137888159_137888289_137889146
transcript_76665.known	chr5	-	1208	6	FSM	ENSG00000112981.5	ENST00000265191.4	1208	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.48193472919817	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-138139364	False	NA	NA	False	AATAAA	-17	NA	138139428	138115174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138786_138139370
transcript_76668.known	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	408	junction_9	40.8032390992143	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	138172471	True	NA	76	True	ATTAAA	-26	NA	138179111	138187723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
transcript_76673.known	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_13	44.1935138529023	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	-138207009	True	NA	51	True	AATAAA	-16	NA	138213323	138187649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
transcript_76675.known	chr5	-	1079	3	FSM	ENSG00000094880.11	ENST00000394884.7	1079	3	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	41.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTTTGAGTGTCATT	-138207029	True	NA	0	True	AATAAA	-21	NA	138213343	138205870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138206685_138212990_138213064_138213151
transcript_76677.known	chr5	-	2967	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	173.161014209623	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	-138178366	False	NA	-15	True	AATAAA	-4	NA	138178669	138156896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_76678.known	chr5	-	2982	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	153.341930012636	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138168681	True	NA	0	True	AATAAA	-19	NA	138178633	138156881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_76679.known	chr5	-	3198	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	151.850057323983	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138168678	True	NA	0	True	AATAAA	-19	NA	138178630	138156881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_76680.known	chr5	-	3005	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	176.352055559327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138178296	False	NA	0	True	AATAAA	-19	NA	138178599	138156881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_76681.known	chr5	-	2876	20	FSM	ENSG00000112983.18	ENST00000512140.5	2876	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_18	189.28293029439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	-138168678	True	NA	-33	True	TTTAAA	-25	NA	138178630	138156914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138177570_138177668_138178595
transcript_76682.nic	chr5	-	2128	14	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_13	39.8063359114881	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329495	True	NA	-12	True	AATAAA	-16	NA	138331843	138285268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_76683.known	chr5	-	2093	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	40.3722325338012	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329456	True	NA	-12	True	AATAAA	-16	NA	138331804	138285268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_76684.nic	chr5	-	1820	14	NIC	ENSG00000158402.21	novel	2137	16	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_13	39.8063359114881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGGCTACCAACTTGT	-138329495	True	NA	-5	True	ATTAAA	-16	NA	138331843	138285576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_76699.known	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	62.7573900030905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	-138329446	True	NA	-1	True	ATTAAA	-20	NA	138331794	138285572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
transcript_76700.nic	chr5	-	1915	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	63.1728580958627	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329497	True	NA	-12	True	AATAAA	-16	NA	138331845	138285268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
transcript_76709.known	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	18.7683243791235	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	138333204	True	NA	28	True	AATAAA	-33	NA	138338265	138349729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_7671.known	chr1	-	598	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	740.438046024109	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155173462	False	NA	-15	True	AATAAA	-15	NA	155173475	155169407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
transcript_76711.known	chr5	+	551	4	FSM	ENSG00000120709.11	ENST00000511595.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCTCCTTTATCCAC	138331380	True	NA	NA	False	AATAGA	-44	NA	138332104	138337146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873
transcript_76717.nic	chr5	+	1738	3	ISM	ENSG00000120709.11	ENST00000513056.5	923	5	-237	4043	14	14	5prime_fragment	FALSE	canonical	3	65	junction_1	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAAAACTTT	138337945	False	NA	NA	False	NA	NA	NA	138338028	138343037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_138338308_138341183_138341414_138341808
transcript_76718.known	chr5	+	1882	2	FSM	ENSG00000120709.11	ENST00000511024.5	1882	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	138333204	True	NA	NA	False	NA	NA	NA	138338265	138343023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138338308_138341183
transcript_76719.nic	chr5	+	1276	2	ISM	ENSG00000120709.11	ENST00000505768.1	772	3	246	2208	-5	14	5prime_fragment	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAAAACTTT	138333199	True	NA	NA	False	NA	NA	NA	138338260	138343037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_138338308_138341808
transcript_76723.known	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_10	73.5918473745564	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-138528702	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
transcript_76724.known	chr5	-	3874	11	FSM	ENSG00000120705.13	ENST00000499810.6	3874	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	226.079720452764	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-138528695	True	NA	NA	False	ATTAAA	-16	NA	138543229	138506094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542633_138542937_138543096
transcript_76740.known	chr5	-	4415	17	FSM	ENSG00000113013.16	ENST00000678300.1	4415	17	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_16	696.644457381238	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533525	True	NA	NA	False	CATAAA	-25	NA	138575417	138553755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574122_138575237
transcript_76741.known	chr5	-	4449	17	FSM	ENSG00000113013.16	ENST00000677988.1	4449	17	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_16	677.076239706431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533511	True	NA	NA	False	CATAAA	-25	NA	138575403	138553755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574170_138575237
transcript_76742.known	chr5	-	4329	17	FSM	ENSG00000113013.16	ENST00000678794.1	4329	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	701.263045778829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533448	True	NA	NA	False	CATAAA	-25	NA	138575340	138553755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573776_138573851_138574067_138574127_138575237
transcript_76749.known	chr5	-	4327	16	FSM	ENSG00000113013.16	ENST00000677425.1	4327	16	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_8	699.26044742523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533525	True	NA	NA	False	CATAAA	-25	NA	138575417	138553755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_76751.known	chr5	-	3142	16	FSM	ENSG00000113013.16	ENST00000524109.2	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_4	115.096404036886	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGCCTGTCATTTTT	-138575533	True	NA	-3	True	TATAAA	-17	NA	138575675	138555826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_76762.known	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2657	junction_1	116.448314715156	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-138533527	True	NA	NA	False	NA	NA	NA	138575419	138559102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_76770.known	chr5	+	3754	18	FSM	ENSG00000044115.21	ENST00000302763.12	3754	18	0	0	0	0	multi-exon	TRUE	canonical	3	1423	junction_3	126.776538276763	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGCCCAAAGTCGTC	138732298	True	NA	28	True	AATAAA	-22	NA	138753424	138935034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_76774.known	chr5	+	2741	17	FSM	ENSG00000044115.21	ENST00000521724.5	2741	17	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	392.032519178894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCCAGGTGGTGAATTT	138732294	True	NA	-49	True	AATACA	-41	NA	138753420	138934213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138753511_138781922_138782030_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_7678.known	chr1	-	523	5	FSM	ENSG00000163463.13	ENST00000295682.6	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_4	196.278501115125	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156819	True	NA	-15	True	AATAAA	-15	NA	155173304	155169407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173220
transcript_76780.known	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_9	8.75312995165828	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-139197256	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
transcript_76781.nnic	chr5	-	1290	8	NNC	ENSG00000120725.13	novel	1889	10	NA	NA	-19308	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	18.3758937031034	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCATCCTCTTTCTGCTG	-139061916	True	NA	-11	True	ATTAAA	-12	NA	139061990	138946994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139061964
transcript_76788.known	chr5	+	3970	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	1060.07183604596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	139263665	True	NA	5	True	AATAAA	-7	NA	139274102	139330394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_7679.known	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1721	junction_1	53.1057644914582	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156753	True	NA	-15	True	AATAAA	-15	NA	155173238	155169407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
transcript_76792.known	chr5	+	2243	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	1096.56809630946	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	139263666	True	NA	-26	True	AAGAAA	-23	NA	139274103	139329757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_76796.known	chr5	+	5069	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	445.291947341682	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	139263320	True	NA	9	True	AATGAA	-20	NA	139293739	139331677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_7680.known	chr1	-	578	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_3	191.217735114247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	-155156766	True	NA	-16	True	AATAAA	-14	NA	155173251	155169408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
transcript_76801.known	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	697.855973094501	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139263358	True	NA	-31	True	NA	NA	NA	139293777	139330441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_76807.nic	chr5	+	2841	14	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	234	junction_1	714.832044658748	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139293551	False	NA	-31	True	NA	NA	NA	139293642	139330441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139293806_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_7681.known	chr1	-	414	3	FSM	ENSG00000163463.13	ENST00000482246.5	414	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	-155156783	True	NA	-16	True	AATAAA	-14	NA	155173268	155169408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169620_155172737_155172893_155173220
transcript_76813.known	chr5	+	2518	14	FSM	ENSG00000015479.20	ENST00000503811.5	2518	14	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	654.667194912556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGCTAGATTTCGTA	139263330	True	NA	NA	False	AAGAAA	-42	NA	139293749	139330002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139294029_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_76819.nic	chr5	+	2799	13	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	972.294119166966	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139293551	False	NA	-31	True	NA	NA	NA	139293642	139330441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139293806_139314674_139314737_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_76841.nnic	chr5	+	735	6	NNC	ENSG00000281398.4	novel	865	6	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.018798233132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	139263634	True	NA	17	True	AATAAA	-14	NA	139274071	139284900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280030_139284541
transcript_76842.known	chr5	+	865	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	89.376954524083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	139263680	True	NA	NA	False	NA	NA	NA	139274117	139283244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
transcript_76844.nnic	chr5	+	755	6	NNC	ENSG00000281398.4	novel	865	6	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.018798233132	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	139263634	True	NA	17	True	AATAAA	-14	NA	139274071	139284900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139284550
transcript_76849.known	chr5	+	1264	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	75.3537490772689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	139263664	True	NA	7	True	AATAAA	-17	NA	139274101	139280947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_76856.known	chr5	+	679	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	33.0252428706689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCCTGGGTTCAAGC	139263693	True	NA	NA	False	NA	NA	NA	139274130	139279586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
transcript_76860.known	chr5	+	2383	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	89.9704812702477	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	139263693	True	NA	16	True	AATAAA	-13	NA	139274130	139284899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
transcript_76866.known	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3644	junction_3	239.708619415786	3839	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	139310187	True	NA	12	True	AATAAA	-16	NA	139341853	139369717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
transcript_76867.known	chr5	-	1887	3	FSM	ENSG00000170476.16	ENST00000503120.5	1887	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTTCTCTGCAAAAG	-139389791	False	NA	-1	True	AATAAA	-14	NA	139389883	139387568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139387922_139388020_139388132_139388460
transcript_76868.known	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	17.6136310850432	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-139403296	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_76870.known	chr5	-	646	4	FSM	ENSG00000170469.11	ENST00000451821.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	2.86744175568088	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTCTTAGTCCACCT	-139403274	True	NA	0	True	CATAAA	-34	NA	139404067	139401500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139401826_139401914_139402046_139402627_139402694_139403943
transcript_76872.known	chr5	-	5102	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.2557774797298	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	-139437108	True	NA	NA	False	ATTAAA	-20	NA	139439525	139410202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_76873.nic	chr5	-	1137	8	NIC	ENSG00000170464.10	novel	655	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	53.0967541957364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAGCTCTTCAGTCA	-139437108	True	NA	NA	False	ATTAAA	-18	NA	139439525	139419067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_139419173_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_76878.known	chr5	-	1031	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	4.36597393430856	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATTACTTTTAAGGTC	-139462400	True	NA	-14	True	ATTAAA	-19	NA	139462743	139448559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
transcript_76882.known	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	2007	junction_1	243.165752797003	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	139538798	True	NA	7	True	AATAAA	-24	NA	139561338	139628434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_76884.known	chr5	+	1113	7	FSM	ENSG00000131508.16	ENST00000505548.5	1113	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	874.35264942445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGGTGGGTATGGTGTG	139561613	False	NA	-90	True	NA	NA	NA	139562028	139627115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139562408_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_76887.nic	chr5	+	2292	3	NIC	ENSG00000171604.12	novel	568	2	NA	NA	-87	0	intron_retention	FALSE	canonical	2	10	junction_1	379	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	139647365	True	NA	34	True	AATAAA	-25	NA	139647816	139683882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139648005_139680363_139681448_139682862
transcript_76889.known	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	89	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	139644574	True	NA	34	True	AATAAA	-25	NA	139648348	139683882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139648846_139680363_139681448_139682862
transcript_76890.known	chr5	+	1892	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTCGTTTATCCATT	139647168	True	NA	NA	False	AATGAA	-2	NA	139648932	139683593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139649010_139680363_139681448_139682862
transcript_76894.known	chr5	+	462	3	FSM	ENSG00000120306.11	ENST00000644078.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	234.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTTTCTTTGACA	140172316	True	NA	NA	False	AATAAA	-23	NA	140175216	140228915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140175286_140194445_140194653_140228729
transcript_76895.known	chr5	+	790	3	FSM	ENSG00000120306.11	ENST00000261811.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	38	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	140172287	True	NA	6	True	AATAAA	-17	NA	140175187	140243789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140175286_140194445_140194653_140243304
transcript_76897.nic	chr5	+	661	2	ISM	ENSG00000120306.11	ENST00000509789.2	813	3	-78	38263	-46	0	5prime_fragment	FALSE	canonical	2	20	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	140172209	True	NA	6	True	AATAAA	-17	NA	140175109	140243789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_140175286_140243304
transcript_76898.known	chr5	+	665	4	FSM	ENSG00000120306.11	ENST00000509589.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.61846375863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCCATGTTTT	140172255	True	NA	NA	False	GATAAA	-26	NA	140175155	140244810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140175286_140194445_140194653_140243304_140243464_140244641
transcript_76900.known	chr5	-	1336	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	46.0241482509152	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGACTGTGATCTG	-140295745	True	NA	14	True	NA	NA	NA	140303101	140245034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
transcript_76903.known	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	310.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-140295757	True	NA	-76	True	NA	NA	NA	140303113	140245124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140246058_140281448_140281534_140303040
transcript_76904.known	chr5	-	787	3	FSM	ENSG00000113068.10	ENST00000507185.1	787	3	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGATGGTGCTCCAAT	-140295730	True	NA	NA	False	NA	NA	NA	140303086	140280959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140281534_140300415_140300583_140303040
transcript_76906.known	chr5	-	2358	6	FSM	ENSG00000113070.8	ENST00000230990.7	2358	6	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	2.78567765543682	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGTCTGTTTGTTTT	-140346253	True	NA	0	True	AATAAA	-19	NA	140346603	140332842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140334281_140334657_140334749_140335871_140336028_140342634_140342813_140345910_140346085_140346282
transcript_76907.nnic	chr5	+	1682	12	NNC	ENSG00000131503.21	novel	2135	11	NA	NA	301	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	101.034156731505	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140402187	False	NA	13	True	AATAAA	-22	NA	140402221	140472477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140472380
transcript_76909.known	chr5	+	2135	11	FSM	ENSG00000131503.21	ENST00000394723.7	2135	11	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	33.520739848637	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140387823	True	NA	13	True	AATAAA	-22	NA	140401853	140472477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_76911.known	chr5	+	2035	11	FSM	ENSG00000131503.21	ENST00000394722.7	2035	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	110.379572385474	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140387890	False	NA	13	True	AATAAA	-22	NA	140401920	140472477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140402274_140436103_140436258_140438493_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_76913.known	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	143.051345676998	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549044	True	NA	-23	True	NA	NA	NA	140557473	140550067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
transcript_76916.known	chr5	-	978	5	FSM	ENSG00000213523.12	ENST00000520427.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	496.761008936893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACACCATCTCCTAT	-140557665	False	NA	NA	False	NA	NA	NA	140557677	140550681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557333_140557427
transcript_76920.known	chr5	+	693	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	28	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	140547182	True	NA	11	True	AGTAAA	-13	NA	140547661	140549576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140547841_140548905_140549077_140549233
transcript_76921.known	chr5	-	769	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	530	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTACTCATAACATGC	-140549017	True	NA	-90	True	NA	NA	NA	140557446	140550551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140557146
transcript_76924.known	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_2	42.9495828462474	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549027	True	NA	-23	True	NA	NA	NA	140557456	140550067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
transcript_76925.known	chr5	-	2131	13	FSM	ENSG00000113108.20	ENST00000357560.9	2131	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	24.1982552171754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-140564244	True	NA	-1	True	AATAAA	-19	NA	140564598	140558267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561850_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_76928.nic	chr5	-	2314	11	NIC	ENSG00000113108.20	novel	2131	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_10	14.9415527974839	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-140564377	False	NA	-1	True	AATAAA	-19	NA	140564389	140558267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_76930.known	chr5	+	2666	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	156.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	140560068	True	NA	19	True	AATAAA	-40	NA	140564827	140569100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140564859_140565872_140565972_140566564
transcript_76931.known	chr5	+	2789	3	FSM	ENSG00000176087.16	ENST00000612662.2	2789	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	360	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCCATGATTGTCT	140560059	True	NA	8	True	AATAAA	-29	NA	140564818	140569089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140564859_140565747_140565972_140566564
transcript_76935.known	chr5	+	1905	20	FSM	ENSG00000113141.19	ENST00000417647.7	1905	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	661	junction_7	84.1833179729259	736	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTGAGCATGTC	140636436	True	NA	23	True	ATTAAA	-17	NA	140647828	140662480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178_140662214_140662301
transcript_76943.known	chr5	+	1834	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	30.1736023867177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	140637015	True	NA	23	True	AATAAA	-23	NA	140639503	140645408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_76945.known	chr5	+	1865	12	FSM	ENSG00000113119.13	ENST00000394671.8	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	16.03560088889	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	140636962	True	NA	19	True	AATAAA	-19	NA	140639450	140645404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_7695.known	chr1	+	1085	8	FSM	ENSG00000173171.15	ENST00000609421.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_3	31.0240196608751	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCAAACATTTTCTCC	155202246	True	NA	NA	False	AATAAA	-16	NA	155209246	155213824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_76968.known	chr5	-	649	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-140631957	True	NA	65	True	NA	NA	NA	140647630	140645284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140645679_140647255_140647363_140647482
transcript_76969.known	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	878	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	-140631972	True	NA	-19	True	AATAAA	-21	NA	140647645	140645368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140645726_140647255_140647363_140647482
transcript_76974.known	chr5	+	2363	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	69.460016394693	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	140689821	True	NA	-22	True	NA	NA	NA	140691452	140699271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_76976.known	chr5	+	2257	13	FSM	ENSG00000112855.17	ENST00000642452.1	2257	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	56.3616792589512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGAGGCTGTTTTAGAA	140691635	False	NA	-45	True	NA	NA	NA	140691682	140699248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696028_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_76977.known	chr5	+	2468	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	22.4493256518369	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	140689823	True	NA	12	True	AATAAA	-13	NA	140691454	140699305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_76981.known	chr5	-	1902	13	FSM	ENSG00000170445.16	ENST00000507746.7	1902	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	149.290242108749	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGAGATGGTCCCATC	-140683064	True	NA	-103	True	NA	NA	NA	140691415	140674004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674669_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_76982.known	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	131.748155163133	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-140683026	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_76984.known	chr5	+	2346	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	57.269841197124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	140689821	True	NA	-13	True	NA	NA	NA	140691452	140699280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_76985.known	chr5	-	1789	12	FSM	ENSG00000170445.16	ENST00000438307.6	1789	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	155.300561695088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	-140682990	True	NA	-13	True	AATAAA	-7	NA	140691341	140673914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140690854_140690945_140691214
transcript_76988.known	chr5	-	2729	12	FSM	ENSG00000170445.16	ENST00000676327.1	2729	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	158.721805591569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-140683038	True	NA	NA	False	NA	NA	NA	140691389	140673034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_76990.known	chr5	-	1401	11	FSM	ENSG00000170445.16	ENST00000415192.6	1401	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	157.692866040287	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATATGTACTTCAA	-140682990	True	NA	-96	True	NA	NA	NA	140691341	140674200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140683099_140683220_140690854_140690945_140691214
transcript_76993.known	chr5	-	2643	10	FSM	ENSG00000170445.16	ENST00000431330.7	2643	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	175.638798829646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	NA	False	NA	NA	False	NA	NA	NA	140691537	140673034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140690854_140690945_140691214
transcript_77.known	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_5	2371.66899882762	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
transcript_77000.known	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	26.7628473821453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	140660485	True	NA	22	True	AGTAAA	-19	NA	140664903	140672345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
transcript_77004.known	chr5	+	2477	6	FSM	ENSG00000120314.19	ENST00000506393.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	63.795297632349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	140660449	True	NA	21	True	AGTAAA	-18	NA	140664867	140672344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140665104_140668233_140668503_140668611_140668792_140668890_140669249_140669332_140669691_140671268
transcript_77005.known	chr5	+	1544	6	FSM	ENSG00000146007.11	ENST00000274712.8	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	23.8109218637162	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTGTGAATATTTGT	140694822	True	NA	40	True	NA	NA	NA	140700446	140706686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140703992_140704425_140704572_140705612
transcript_77009.known	chr5	+	735	6	FSM	ENSG00000146007.11	ENST00000506644.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	97.0373124112576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGGGGGCTCATGGT	140694839	True	NA	NA	False	NA	NA	NA	140700463	140705881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140704005_140704425_140704572_140705612
transcript_77012.known	chr5	-	915	5	FSM	ENSG00000170445.16	ENST00000509087.2	915	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	254.676633203755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCGTGTGTCAGTGA	-140683002	True	NA	-5	True	AATAAA	-15	NA	140691353	140673906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140690854_140690945_140691214
transcript_77013.known	chr5	-	1145	4	FSM	ENSG00000170445.16	ENST00000518126.6	1145	4	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	33.3099918276117	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCACATAGCAAAGGTAT	-140682992	True	NA	NA	False	AATAAA	-18	NA	140691343	140679077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140679884_140683099_140683220_140690854_140690945_140691214
transcript_77014.known	chr5	-	1229	3	FSM	ENSG00000170445.16	ENST00000502888.2	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACAGAGGTCTTGCTA	-140683002	True	NA	NA	False	AATACA	-3	NA	140691353	140682219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140683220_140690854_140690945_140691214
transcript_77016.known	chr5	-	2229	3	FSM	ENSG00000170445.16	ENST00000674819.1	2229	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATTGTTCACCAAATC	-140683026	True	NA	NA	False	NA	NA	NA	140691377	140688797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140690774_140690854_140690945_140691214
transcript_77017.known	chr5	+	2469	14	FSM	ENSG00000112855.17	ENST00000646468.1	2469	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	65.9784795468462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689826	True	NA	-2	True	NA	NA	NA	140691457	140699291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_77018.known	chr5	+	2436	14	FSM	ENSG00000112855.17	ENST00000642970.1	2436	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	71.2958665822639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689823	True	NA	-2	True	NA	NA	NA	140691454	140699291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691516_140691794_140692018_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_77019.known	chr5	+	2808	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	140806537	True	NA	NA	False	NA	NA	NA	140807080	140817546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140809573_140817230
transcript_7702.known	chr1	+	1441	7	FSM	ENSG00000173171.15	ENST00000316721.8	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	291.114334163668	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	155208720	True	NA	NA	False	AATAAA	-15	NA	155208796	155213823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_77020.known	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-141306812	True	NA	-2	True	AATAAA	-25	NA	141320784	141318489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_141318500_141320800
transcript_77021.known	chr5	+	3148	1	FSM	ENSG00000272070.2	ENST00000606901.1	3148	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTGAGACCTTTCAT	141326045	True	NA	6	True	ACTAAA	-17	NA	141326209	141329357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141326200_141329400
transcript_77023.known	chr5	-	1933	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_12	79.3570142727517	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-141631800	True	NA	-23	True	AATAAA	-21	NA	141636849	141620880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
transcript_77026.known	chr5	+	621	3	FSM	ENSG00000228737.2	ENST00000422040.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCCCCCCTCTGTTC	141618386	False	NA	NA	False	AATAAA	-15	NA	141618413	141626481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141618490_141625846_141625966_141626055
transcript_7703.known	chr1	+	2579	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	25.1241362482817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	155202250	True	NA	NA	False	AATAAA	-15	NA	155209250	155213823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_77033.known	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	30.8784589054689	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-141649080	True	NA	-10	True	AATAAA	-19	NA	141651418	141639301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_77034.nnic	chr5	+	1510	9	NNC	ENSG00000164620.9	novel	2154	8	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	82.6860591333267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141636940	True	NA	12	True	AATAAA	-17	NA	141637420	141641064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640003_141640176_141640296_141640411_141640446_141640670
transcript_77037.known	chr5	+	2154	8	FSM	ENSG00000164620.9	ENST00000444782.5	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	62.2273645429339	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636949	141641063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77040.known	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	38.0996500421373	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141635569	True	NA	12	True	AATAAA	-17	NA	141636996	141641064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77042.known	chr5	+	1419	7	FSM	ENSG00000164620.9	ENST00000518856.1	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	89.9685130105713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATTACAGCTGCTT	141636961	True	NA	1	True	AATAAA	-6	NA	141637441	141641053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77043.nnic	chr5	+	2386	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	68.6132286656807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	141917820	True	NA	6	True	AATAAA	-15	NA	141923798	141940146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
transcript_77048.nnic	chr5	+	2339	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-56	6	combination_of_known_splicesites	FALSE	canonical	3	38	junction_12	53.9665534279232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTGCCCTTGAGTAT	141917820	True	NA	12	True	AATAAA	-21	NA	141923798	141940152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
transcript_77049.known	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	58.9693894227241	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	141917876	True	NA	-20	True	NA	NA	NA	141923854	141940120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
transcript_77050.known	chr5	+	4907	12	FSM	ENSG00000081791.9	ENST00000432126.7	4907	12	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_11	25.0543211495435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTCTGATCATGTC	141917892	True	NA	26	True	AATAAA	-19	NA	141923870	141942047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520
transcript_77055.nic	chr5	+	1702	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-56	5124	-56	0	5prime_fragment	FALSE	canonical	3	193	junction_9	16.2351546624472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACAGGGTGGTTGTGAG	141917820	True	NA	31	True	TTTAAA	-36	NA	141923798	141934996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_77056.nic	chr5	+	2189	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-56	4637	-56	487	5prime_fragment	FALSE	canonical	3	193	junction_9	16.2351546624472	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTACATAGGGGACTG	141917820	True	NA	11	True	ATTAAA	-27	NA	141923798	141935483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_77058.nic	chr5	+	1521	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-111	444	-56	0	5prime_fragment	FALSE	canonical	3	218	junction_6	9.82292196438348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGAGTGATCTAAGTCT	141917820	True	NA	11	True	ATTAAA	-25	NA	141923798	141933882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_77059.nic	chr5	+	1817	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-111	148	-56	-148	5prime_fragment	FALSE	canonical	3	218	junction_6	9.82292196438348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCAAAAGATGCTTA	141917820	True	NA	NA	False	ATTAAA	-20	NA	141923798	141934178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_77064.known	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	25.2830847603689	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTCATGAAAGCCTT	141967431	True	NA	9	True	AATAAA	-16	NA	141969104	141990292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_77070.nic	chr5	+	1919	9	NIC	ENSG00000013561.18	novel	815	5	NA	NA	13	-1146	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	39.7317174937102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGCCCAAAGCTCTGA	141967496	True	NA	9	True	ATTAAA	-21	NA	141969169	141988039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141969235_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_77076.known	chr5	+	2905	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	40.7816485339038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	141967437	True	NA	19	True	AATAAA	-28	NA	141969110	141989185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_77079.known	chr5	+	4213	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	45.4245281219524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	NA	False	NA	7	True	AATAAA	-14	NA	141968885	141990290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_7709.known	chr1	-	768	2	FSM	ENSG00000169231.13	ENST00000498500.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	NA	False	NA	0	True	CATAAA	-19	NA	155196442	155195587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155195900_155195986
transcript_77091.nic	chr5	+	1078	6	NIC	ENSG00000013561.18	novel	2905	8	NA	NA	-60	-1146	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	53.2939020902016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGCCCAAAGCTCTGA	NA	False	NA	9	True	ATTAAA	-21	NA	141969034	141988039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141969168_141970703_141970878_141973582_141973743_141983379_141983553_141984802_141984934_141987732
transcript_77093.nic	chr5	+	899	5	NIC	ENSG00000013561.18	novel	4213	8	NA	NA	-55	-1146	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	70.080311072369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGCCCAAAGCTCTGA	141968898	True	NA	9	True	ATTAAA	-21	NA	141969039	141988039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141969168_141973582_141973743_141983379_141983553_141984802_141984934_141987732
transcript_77099.known	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	266.40991891812	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-142003211	True	NA	-17	True	ATTAAA	-16	NA	142013030	142000673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
transcript_77102.known	chr5	-	754	7	FSM	ENSG00000113552.16	ENST00000504139.5	754	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	232.675501264935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAGAAAGAAACTGA	-142003212	True	NA	NA	False	NA	NA	NA	142013031	142002085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003215_142004985_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_77103.known	chr5	-	2267	7	FSM	ENSG00000113552.16	ENST00000311337.11	2267	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	91.5649435585961	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCATTTGTGGATTTGA	-142003208	True	NA	-14	True	ATTAAA	-19	NA	142013027	142000670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_77108.known	chr5	-	4904	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	-142312947	True	NA	-4	True	TATAAA	-31	NA	142325021	142310429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142315156_142324843
transcript_7711.known	chr1	-	2387	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	21.5061013829614	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155244656	False	NA	NA	False	NA	NA	NA	155244670	155234451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
transcript_77110.nnic	chr5	+	292	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTAAGATAAAGCAGCAAG	142701722	True	NA	19	True	AATAAA	-19	NA	142703352	142705771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr5_+_142703491_142705617
transcript_77117.nnic	chr5	+	279	2	NNC	ENSG00000236714.3	novel	2752	5	NA	NA	-12878	-14061	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCCCTAGAGTGAGGG	142701720	True	NA	NA	False	GATAAA	-14	NA	142703350	142745346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_142703491_142745207
transcript_77118.known	chr5	-	2594	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	5.66651347832157	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	-143404368	True	NA	NA	False	TATAAA	-19	NA	143404544	143281810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
transcript_77119.known	chr5	+	1249	3	FSM	ENSG00000251205.3	ENST00000669728.1	1249	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTCATCTCAAATGGA	NA	False	NA	NA	False	AATAAA	-14	NA	143543902	143560137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_143543949_143544613_143544684_143559004
transcript_77120.known	chr5	-	2255	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.38826751559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	-144165973	True	NA	-4	True	ATTAAA	-15	NA	144170630	144159272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
transcript_77121.known	chr5	-	3144	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	25.0519460321948	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTATGTGGCGCTTTTTT	-144166002	True	NA	-3	True	ATTAAA	-25	NA	144170659	144158161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
transcript_77129.known	chr5	-	1102	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	18.8484828599664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGTAAGATATGTGT	-145833822	True	NA	-12	True	AATAAA	-9	NA	145835336	145760255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
transcript_7713.known	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	9.84936546179499	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155241177	False	NA	NA	False	NA	NA	NA	155241249	155234451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
transcript_77130.known	chr5	-	2140	8	FSM	ENSG00000186314.12	ENST00000334744.8	2140	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	27.1593934590083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-145833790	True	NA	NA	False	NA	NA	NA	145835304	145759018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819378_145819415_145819944_145820019_145823076_145823135_145835176
transcript_77132.known	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	7.81913607049327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	-145833828	True	NA	-1	True	AATAAA	-15	NA	145835342	145756343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
transcript_77137.known	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	303.179145346009	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-146160856	True	NA	-30	True	AATAAA	-14	NA	146182670	146113042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77138.known	chr5	-	7140	32	FSM	ENSG00000133706.19	ENST00000674174.1	7140	32	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_31	315.329377040855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	-46	True	NA	NA	NA	146182696	146110565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182621
transcript_77144.known	chr5	-	7090	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_27	307.093007988713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146160836	True	NA	-46	True	NA	NA	NA	146182650	146110565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77155.known	chr5	-	9858	31	FSM	ENSG00000133706.19	ENST00000674218.1	9858	31	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_18	175.683329380514	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146160856	True	NA	-46	True	NA	NA	NA	146182670	146110565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77161.known	chr5	-	4783	15	FSM	ENSG00000133706.19	ENST00000674417.1	4783	15	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_2	92.0655545061811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGGGTTCTAACCT	-146160849	True	NA	NA	False	NA	NA	NA	146182663	146146511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77162.known	chr5	-	2944	14	FSM	ENSG00000133706.19	ENST00000674450.1	2944	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	364.11047481475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTTATATTCTTTCTC	-146160836	True	NA	NA	False	NA	NA	NA	146182650	146148199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77165.nic	chr5	-	858	7	ISM	ENSG00000133706.19	ENST00000618084.2	1954	14	-13	8903	-3	2125	5prime_fragment	FALSE	canonical	3	1272	junction_2	94.7376494442533	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAACAAAATTAAATT	-146160859	True	NA	6	True	NA	NA	NA	146182673	146160402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77166.nic	chr5	-	603	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-23	5609	-3	-5609	5prime_fragment	FALSE	canonical	3	1285	junction_3	92.5499864937862	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAGGTTTGATAGTG	-146160859	True	NA	NA	False	GATAAA	-7	NA	146182673	146168136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77167.known	chr5	-	1919	4	FSM	ENSG00000173261.9	ENST00000311450.9	1919	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTACTGTTCTTCTT	-146105554	False	NA	-5	True	AATAAA	-15	NA	146105577	146084312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146084573_146085460_146085598_146098155_146098293_146104192
transcript_77168.known	chr5	+	3311	20	FSM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	18.7248631133837	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCTCTAAGGCACATTT	146193145	True	NA	NA	False	NA	NA	NA	146203549	146339251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146314895_146315019_146339102
transcript_77169.known	chr5	+	6537	21	FSM	ENSG00000091009.8	ENST00000265271.7	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8.41070746132571	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	146193200	True	NA	17	True	NA	NA	NA	146203604	146289223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
transcript_77172.nic	chr5	-	2046	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	52.1237949500993	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTCTTCTTGTTTTGT	-146878757	False	NA	-10	True	AATAAA	-17	NA	146878767	146589508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_77174.known	chr5	-	10828	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	48.8648931010575	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTCTCTCTCTCTCTC	-146877806	True	NA	NA	False	AATAAA	-16	NA	146878757	146580741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
transcript_77175.known	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_9	27.0860539944019	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	-146878884	False	64	-5	True	AATAAA	-22	NA	146878894	146589503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
transcript_77177.known	chr5	-	5309	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_13	113.023797043918	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTGTTCTCCAGTCTT	-147453914	False	NA	-10	True	ATTAAA	-17	NA	147453959	147390810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
transcript_77178.known	chr5	-	771	2	FSM	ENSG00000113657.13	ENST00000504965.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTTTGAGCAGATATC	-147509519	False	NA	NA	False	NA	NA	NA	147509535	147472631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147473345_147509477
transcript_7718.known	chr1	-	1499	5	FSM	ENSG00000160767.22	ENST00000487649.5	1499	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	58.7553189081635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACGTGTGCCTATGCAA	-155255181	False	NA	NA	False	NA	NA	NA	155255191	155247426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155253624_155253733_155254652
transcript_77183.nnic	chr5	+	2324	6	NNC	ENSG00000280780.3	novel	2074	5	NA	NA	-141	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	75.3615286469164	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGAGCATCCGTCTC	147559833	True	NA	7	True	AATAAA	-17	NA	147559852	147662010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147560138_147594359_147594478_147595424_147595541_147632685_147632804_147636276_147636406_147660452
transcript_77185.nnic	chr5	+	925	5	NNC	ENSG00000280780.3	novel	2074	5	NA	NA	-141	-17170	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	79.4807366598977	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTGCTAGACACTGAAT	147559833	True	NA	4	True	NA	NA	NA	147559852	147643644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147643367
transcript_77186.known	chr5	+	831	5	FSM	ENSG00000280780.3	ENST00000627433.3	2074	5	33	1210	13	-5	multi-exon	FALSE	canonical	3	75	junction_3	56.7692698561466	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAGAGCACTGGACAAA	147555042	True	NA	NA	False	NA	NA	NA	147560026	147660809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147660452
transcript_7719.known	chr1	-	2103	5	FSM	ENSG00000160767.22	ENST00000481822.1	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	10.6183802907977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-155255473	False	NA	NA	False	NA	NA	NA	155255483	155252748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
transcript_77190.nnic	chr5	+	1041	4	FSM	ENSG00000280780.3	ENST00000689846.1	900	4	-141	0	-141	0	multi-exon	FALSE	canonical	3	50	junction_3	67.5886249469704	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGAATTGGTCTGTTT	147559833	True	NA	10	True	AATAAA	-33	NA	147559852	147618972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147618450
transcript_77191.nnic	chr5	+	2074	4	NNC	ENSG00000280780.3	novel	900	4	NA	NA	-141	2702	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	89.7007370216222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTTTTTACATGCTTT	147559833	True	NA	NA	False	AATAAA	-14	NA	147559852	147621674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147560138_147594359_147594478_147595424_147595541_147620119
transcript_77192.known	chr5	+	720	4	FSM	ENSG00000280780.3	ENST00000630514.2	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	74.6428533454848	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCACTGGACAAAAGGTA	147555029	True	NA	NA	False	NA	NA	NA	147560013	147660814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147660452
transcript_77193.known	chr5	+	1920	4	FSM	ENSG00000280780.3	ENST00000626945.2	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	76.8027777275449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTGAGCATCCGTCT	147555009	True	NA	6	True	AATAAA	-16	NA	147559993	147662009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595439_147595541_147660452
transcript_77200.known	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	11.2587743560301	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	-147782754	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_77208.nnic	chr5	-	689	6	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37201	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	2.0976176963403	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	-147868840	False	88	NA	False	AATAAA	-16	NA	147868872	147824581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147850463_147850543_147868772
transcript_77209.nnic	chr5	-	1078	6	Fusion	ENSG00000164266.11_ENSG00000288774.1	novel	413	4	NA	NA	18	0	multi-exon	FALSE	canonical	0	0	junction_4	22.7806935803105	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	-147872749	True	NA	NA	False	AATAAA	-16	NA	147874313	147824581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147872169_147872354_147873929
transcript_7722.known	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	62.0603285118601	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262346	False	NA	-2	True	AATAAA	-23	NA	155262360	155255980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_77224.nnic	chr5	+	775	5	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	457.043419709769	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147870533	False	NA	NA	False	AATAAA	-13	NA	147870555	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147870755_147871616_147871680_147872176_147872322_147881445_147881649_147882026
transcript_77242.nnic	chr5	+	1834	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-323	0	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_1	393.35932117538	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147870336	False	NA	NA	False	AATAAA	-13	NA	147870358	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
transcript_77245.nnic	chr5	+	708	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	464.128095345336	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147870537	False	NA	NA	False	AATAAA	-13	NA	147870559	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147870755_147872176_147872322_147881445_147881649_147882026
transcript_7725.nic	chr1	-	1446	8	ISM	ENSG00000116521.11	ENST00000302631.8	1545	9	450	0	-42	0	3prime_fragment	FALSE	canonical	3	485	junction_7	61.033614023883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155261887	True	NA	-2	True	AATAAA	-23	NA	155261910	155255980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656
transcript_77270.known	chr5	+	440	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	529.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147870755_147881445_147881649_147882026
transcript_77271.nnic	chr5	+	740	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	546	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147870567	False	NA	NA	False	AATAAA	-13	NA	147870589	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147870962_147881445_147881649_147882026
transcript_77273.nnic	chr5	+	1788	3	NNC	ENSG00000164265.9	novel	672	3	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	546.5	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147869601	True	NA	NA	False	AATAAA	-13	NA	147870698	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147872119_147881445_147881649_147882026
transcript_77277.known	chr5	+	549	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	574	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147871046	False	NA	NA	False	AATAAA	-12	NA	147871497	147882190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147871680_147881445_147881649_147882026
transcript_77280.nnic	chr5	+	511	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	384	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	608.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147867287	False	NA	NA	False	AATAAA	-13	NA	147872401	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147872545_147881445_147881649_147882026
transcript_77285.known	chr5	+	672	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	217	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147871352	True	NA	NA	False	AATAAA	-13	NA	147872017	147882191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147872322_147881445_147881649_147882026
transcript_77288.nnic	chr5	-	616	2	NNC	ENSG00000247199.6	novel	2991	5	NA	NA	52562	-5430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAGTTGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	148231128	148093659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_148093743_148230595
transcript_77289.known	chr5	+	4132	22	FSM	ENSG00000145868.17	ENST00000394370.7	4132	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	20.2944313933215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	148381884	True	NA	NA	False	AATAAA	-18	NA	148384001	148442836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427723_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_77291.known	chr5	+	4401	22	FSM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_14	14.8449278235419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	148381840	True	NA	NA	False	AATAAA	-18	NA	148383957	148442836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427948_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_77292.nic	chr5	+	1394	9	ISM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	31915	0	53	5prime_fragment	FALSE	canonical	3	70	junction_7	7.73688406272189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGATTTTTTTTTCC	148381840	True	NA	NA	False	AATAAA	-16	NA	148383957	148410921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634
transcript_77293.known	chr5	+	2013	1	FSM	ENSG00000169252.6	ENST00000305988.6	2013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGCACCTGTTTCT	148826542	True	NA	21	True	AATAAA	-14	NA	148826610	148828623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_148826600_148828600
transcript_77295.known	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	3.29983164553722	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	149341122	True	NA	13	True	AATAAA	-22	NA	149345498	149354583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
transcript_77301.known	chr5	-	5444	11	FSM	ENSG00000113712.19	ENST00000261798.10	5444	11	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_6	523.08492618312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_77302.known	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	588.018443588294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	-149536963	True	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_77314.known	chr5	-	5360	10	FSM	ENSG00000113712.19	ENST00000377843.8	5360	10	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	302.854485695974	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_77315.known	chr5	-	4902	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	439.973175388828	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGCTAGGAGCAGTG	-149536956	True	NA	NA	False	NA	NA	NA	149551397	149493361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_7732.known	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	108.348845043324	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273482	155262873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
transcript_77326.known	chr5	+	8054	3	FSM	ENSG00000155850.9	ENST00000286298.5	8054	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTCTGTATTTAAATT	149959270	True	NA	10	True	AATAAA	-18	NA	149960757	149987400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_149960980_149977627_149978352_149980292
transcript_77327.known	chr5	-	3493	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTACATATTTTAAAT	-150000385	True	NA	NA	False	AATAAA	-25	NA	150000654	149993117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149996430_150000473
transcript_7733.known	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	110.063167437823	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273329	155262873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
transcript_77332.known	chr5	+	3400	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	279.100036635302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	150330722	True	NA	0	True	AGTAAA	-13	NA	150357717	150384249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
transcript_77334.known	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	3	27	junction_3	133.649670313847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	-150409151	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_77336.known	chr5	-	1270	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	25.3175747621437	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTAGAATAAAAGGT	-150409150	True	NA	-38	True	NA	NA	NA	150412750	150401669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_77340.known	chr5	+	3526	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	320.656598748549	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	150330708	True	NA	4	True	AGTAAA	-17	NA	150357703	150384253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
transcript_77348.known	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_4	11962.2284922167	3194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150236791	True	NA	-28	True	AATAAA	-16	NA	150449691	150444237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
transcript_77353.known	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	21984	junction_4	3950.2178025395	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	-150236839	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
transcript_77354.known	chr5	-	3119	3	FSM	ENSG00000164587.13	ENST00000519690.1	3119	3	0	0	0	0	multi-exon	FALSE	canonical	3	27622	junction_1	2023.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150236827	True	NA	-28	True	AATAAA	-16	NA	150449727	150444237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801
transcript_77358.nnic	chr5	-	1078	5	NNC	ENSG00000250309.2	novel	425	2	NA	NA	141	5074	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	11.0227038425243	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	-150671816	True	NA	-11	True	AATAAA	-16	NA	150672249	150665583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_150666032_150668116_150668273_150670149_150670210_150670527_150670808_150672115
transcript_77362.known	chr5	+	605	2	FSM	ENSG00000164591.14	ENST00000520112.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGTAGCCCTAGCCTG	150672005	True	NA	NA	False	NA	NA	NA	150672056	150676865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150672503_150676706
transcript_77364.known	chr5	-	425	2	FSM	ENSG00000250309.2	ENST00000511626.2	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTGGCTTACTCACC	-150672127	False	NA	NA	False	NA	NA	NA	150672390	150670657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150670808_150672115
transcript_77366.known	chr5	+	3290	2	FSM	ENSG00000164591.14	ENST00000456566.2	3290	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	150672507	False	NA	NA	False	AATAAA	-16	NA	150672651	150679363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150673285_150676706
transcript_77370.known	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	2	200	junction_5	43.3912433562349	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-150697640	True	NA	-6	True	ATTAAA	-17	NA	150701062	150690791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_77376.known	chr5	-	4116	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	14.4683562761405	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCACTCATCACCT	-150755343	True	NA	NA	False	AATATA	-19	NA	150759017	150708439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_77379.known	chr5	+	1521	2	FSM	ENSG00000256235.3	ENST00000526627.2	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	150777596	True	NA	7	True	AATAAA	-14	NA	150778756	150796734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150778973_150795429
transcript_77383.known	chr5	-	3323	7	FSM	ENSG00000145908.13	ENST00000446148.6	3323	7	0	0	0	0	multi-exon	FALSE	non_canonical	1	20	junction_4	62.22182539556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-150904973	False	NA	-14	True	CATAAA	-28	NA	150904983	150894391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
transcript_77384.known	chr5	-	3256	6	FSM	ENSG00000145908.13	ENST00000394226.2	3256	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	59.8952418811378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150902599	True	NA	-21	True	CATAAA	-21	NA	150904978	150894398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150896970_150898057_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_77385.nic	chr5	-	3346	6	NIC	ENSG00000145908.13	novel	3258	6	NA	NA	-78	0	intron_retention	FALSE	non_canonical	1	28	junction_1	59.000338982077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150902488	True	NA	-21	True	CATAAA	-21	NA	150904867	150894398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903384_150903863_150903978_150904703
transcript_77387.known	chr5	-	3226	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	1	9	junction_3	72.5650570178237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-150904973	False	NA	-14	True	CATAAA	-28	NA	150904983	150894391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
transcript_77388.known	chr5	-	4155	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	30.7652401258303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150904779	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_77390.known	chr5	+	1757	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-153	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	176.616647007013	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTACTGTGTGTGGTGCT	NA	False	NA	20	True	AGTAAA	-20	NA	151020437	151028992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151020742_151025339_151025469_151025471_151025494_151026899_151027018_151027431_151027532_151027908
transcript_77393.known	chr5	+	1478	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	176.616647007013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGCCTACTGTGTGTG	151018056	True	NA	15	True	AGTAAA	-15	NA	151020588	151028987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908_151028777_151028902
transcript_77396.known	chr5	+	1603	5	FSM	ENSG00000211445.13	ENST00000388825.9	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_4	20.0919760103381	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCTACTGTGTGTGG	151018058	True	NA	16	True	AGTAAA	-16	NA	151020590	151028988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908
transcript_77398.known	chr5	+	612	4	FSM	ENSG00000211445.13	ENST00000517973.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	200.150498930735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTTTGTTCAGGAAG	151018073	True	NA	NA	False	NA	NA	NA	151020605	151028166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151020742_151026899_151027018_151027431_151027532_151027908
transcript_77399.known	chr5	-	2870	18	FSM	ENSG00000145901.16	ENST00000521591.6	2870	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	17.4020243025629	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-151078595	True	NA	-7	True	CATAAA	-21	NA	151081034	151029944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_7740.known	chr1	+	1417	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	960.212273406251	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287312	True	NA	27	True	AATAAA	-16	NA	155308865	155320665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_77400.known	chr5	-	2935	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	38.1022118349159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGACTCATGTTCA	-151078645	True	NA	-9	True	CATAAA	-19	NA	151081084	151029946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_77402.known	chr5	-	2680	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_16	39.3200012716175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-151078577	True	NA	-7	True	CATAAA	-21	NA	151081016	151029944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
transcript_77403.known	chr5	-	2889	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_17	23.9193979857353	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGAGGGCCTCTGT	-151146541	True	NA	NA	False	AATAAA	-27	NA	151157779	151100705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
transcript_77405.known	chr5	-	248	2	FSM	ENSG00000254298.1	ENST00000523781.1	248	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGTTTCTCAACAAAG	NA	False	NA	NA	False	GATAAA	-21	NA	151158462	151158105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151158319_151158427
transcript_77406.known	chr5	-	3398	9	FSM	ENSG00000198624.13	ENST00000355417.7	3398	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	4.8331537322953	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGACTTTTGTGTTT	-151222649	True	NA	-8	True	AAAAAG	-17	NA	151224092	151181051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151183615_151184343_151184442_151185421_151185542_151186022_151186125_151187385_151187460_151198996_151199085_151201581_151201689_151205399_151205476_151223922
transcript_77410.nnic	chr5	+	1956	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-48	-1202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.7797542396989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	151247664	True	NA	15	True	AATAAA	-15	NA	151253136	151269238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268175_151268667
transcript_77411.nnic	chr5	+	2323	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-281	2325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.7797542396989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCAGAAGTTTTCATTT	NA	False	NA	8	True	AATAAA	-15	NA	151252903	151272765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268175_151272060
transcript_77413.nnic	chr5	+	2125	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	0	2325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.7797542396989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCAGAAGTTTTCATTT	151247712	True	NA	8	True	AATAAA	-15	NA	151253184	151272765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268207_151272009
transcript_77414.nnic	chr5	+	664	4	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-52	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.9910387789146	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTCTCATCTTGTG	151247660	True	NA	NA	False	NA	NA	NA	151253132	151267154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267000
transcript_77415.known	chr5	+	3603	4	FSM	ENSG00000196743.9	ENST00000357164.4	3603	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTGTTCTTACTATA	151247712	True	NA	47	True	AATAGA	-5	NA	151253184	151270440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295
transcript_77422.nnic	chr5	+	1494	6	NNC	ENSG00000123643.13	novel	1621	10	NA	NA	-11	809	intron_retention	FALSE	canonical	3	5	junction_4	29.6405128160766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCACATTAAAACTATGT	151445560	True	NA	NA	False	NA	NA	NA	151447591	151465958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151447814_151458787_151458936_151463552_151463644_151464059_151464119_151464513_151464603_151465073
transcript_77426.nic	chr5	+	1135	2	ISM	ENSG00000123643.13	ENST00000517945.5	552	4	-24	10354	0	-10354	5prime_fragment	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGCCCAGAAATCTATT	151445571	True	NA	NA	False	AATAAA	-42	NA	151447602	151453266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_151447814_151452342
transcript_77427.known	chr5	+	5772	11	FSM	ENSG00000123643.13	ENST00000243389.8	5772	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	10.2024506859872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGCTATCTGTGTCTT	151445571	True	NA	23	True	AATAAA	-23	NA	151447602	151492379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706_151467926_151473672_151473772_151476589_151476757_151479319_151479490_151487982
transcript_77429.known	chr5	-	3451	10	FSM	ENSG00000113140.11	ENST00000231061.9	3451	10	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_3	69.8327808693784	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGACCGGGTGCTCC	-151662220	True	NA	NA	False	AATAAA	-22	NA	151686915	151661095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466_151667601_151669663_151669785_151671572_151671695_151673128_151673217_151674611_151674675_151676131_151676202_151686864
transcript_77438.known	chr5	+	1794	13	FSM	ENSG00000145907.16	ENST00000678101.1	1794	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1074.38256170178	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGACTGGATTTTTT	151732657	True	NA	NA	False	AAAAAG	-25	NA	151771953	151804371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151772656_151772669_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_77439.known	chr5	+	1565	12	FSM	ENSG00000145907.16	ENST00000678070.1	1565	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	853.16687641297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTGTGTGTTAATGG	151732597	True	NA	21	True	TATAAA	-24	NA	151771893	151804218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151771913_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_77443.known	chr5	+	10227	12	FSM	ENSG00000145907.16	ENST00000356245.8	10227	12	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	286.505361754452	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732657	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_77449.known	chr5	+	1768	12	FSM	ENSG00000145907.16	ENST00000676827.1	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	812.766747058445	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTCCTTGCTTAC	151732642	True	NA	NA	False	TTTAAA	-15	NA	151771938	151804346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772033_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_77455.known	chr5	+	10136	11	FSM	ENSG00000145907.16	ENST00000677381.1	10136	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	867.003465967697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732657	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_77464.known	chr5	-	471	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	70.3815000945245	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151753489	True	NA	-5	True	AATAAA	-21	NA	151758631	151742821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
transcript_77467.nnic	chr5	-	409	3	NIC	ENSG00000177556.12	novel	749	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	412	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151753503	True	NA	-5	True	AATAAA	-21	NA	151758645	151742821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_151742960_151746278_151746450_151758545
transcript_77469.known	chr5	+	1000	2	FSM	ENSG00000145907.16	ENST00000676634.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTATTAAAATATTTC	151732650	True	NA	-13	True	NA	NA	NA	151771946	151805319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772033_151804405
transcript_7747.known	chr1	+	1478	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	969.77719090521	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287362	True	NA	27	True	AATAAA	-16	NA	155308915	155320665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_77470.known	chr5	+	1207	3	FSM	ENSG00000145907.16	ENST00000676894.1	1207	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1060	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCTCTGACAATGGAA	151732678	True	NA	NA	False	AATAAA	-17	NA	151771974	151787868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151786867
transcript_77472.known	chr5	-	2121	15	FSM	ENSG00000055147.19	ENST00000520667.5	2121	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	30.2017028848185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-154037573	True	NA	NA	False	AATAAA	-20	NA	154038921	153992498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038387_154038435_154038856
transcript_77473.nic	chr5	-	2208	15	NIC	ENSG00000055147.19	novel	2121	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	28.223235470232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-154037565	True	NA	NA	False	AATAAA	-20	NA	154038913	153992498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038292_154038435_154038856
transcript_77474.nnic	chr5	-	2154	15	NNC	ENSG00000055147.19	novel	2121	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.0796376676277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-154037565	True	NA	NA	False	AATAAA	-20	NA	154038913	153992498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038346_154038435_154038856
transcript_77477.known	chr5	-	4414	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_13	21.4776614376054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGATATTTCACAAA	-154037562	True	NA	NA	False	AATAAA	-25	NA	154038910	153990147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_77486.known	chr5	+	5037	3	FSM	ENSG00000037749.13	ENST00000522782.6	5037	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	154035069	True	NA	28	True	ATTAAA	-31	NA	154038966	154057450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154039012_154049556_154050018_154052919
transcript_77487.known	chr5	+	567	3	FSM	ENSG00000037749.13	ENST00000522177.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	43.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCACCAATGTAGCTTTT	154035096	True	NA	NA	False	NA	NA	NA	154038993	154052952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154039067_154049556_154050018_154052919
transcript_77489.known	chr5	+	2891	3	FSM	ENSG00000037749.13	ENST00000322602.9	2891	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCCTGGCTGAGATC	154035095	True	NA	6	True	AATAAA	-15	NA	154038992	154055033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154039309_154049556_154050018_154052919
transcript_77495.known	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	3.56195171219375	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	-154850381	True	NA	-4	True	AATAAA	-15	NA	154850603	154818491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_77496.known	chr5	+	2708	8	FSM	ENSG00000155508.14	ENST00000517876.5	2708	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	149.795506867032	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856620	True	NA	14	True	AATAAA	-23	NA	154858251	154876792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858526_154858638_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_77498.known	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	133.578212627991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856885	False	NA	14	True	AATAAA	-23	NA	154858516	154876792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_77500.known	chr5	+	923	6	FSM	ENSG00000155508.14	ENST00000520671.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	164.7074983114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCTGATCCCAGAGTG	154855737	True	NA	NA	False	NA	NA	NA	154858626	154875458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858769_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_77503.known	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	50.1431284757277	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154855737	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_77504.nic	chr5	-	2318	16	ISM	ENSG00000082516.9	ENST00000285873.8	5404	28	-12	20347	-12	-16324	5prime_fragment	FALSE	canonical	3	135	junction_5	19.8691273643867	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAAAGCCCACCTTGA	-154933637	True	NA	NA	False	NA	NA	NA	154938223	154907757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_77507.known	chr5	+	784	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	1831	junction_1	75.5476008884465	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	154931708	True	NA	13	True	AATAAA	-13	NA	154941094	154966966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_77508.known	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	-157139252	True	NA	NA	False	AGTAAA	-18	NA	157142775	157138441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157139449_157142400
transcript_77509.known	chr5	-	2071	2	FSM	ENSG00000155868.8	ENST00000286317.6	2071	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGAGGGTTCTCTGGCT	-157139342	True	NA	NA	False	AATAAA	-39	NA	157142865	157137423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157139449_157142819
transcript_77513.known	chr5	+	6452	31	FSM	ENSG00000055163.20	ENST00000620254.5	6452	31	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_10	29.4843838139597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	157262345	True	NA	16	True	ATTAAA	-25	NA	157266122	157395594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_77514.known	chr5	+	1294	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	20.8375641962455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGGGAAGCAGGTGG	157262358	True	NA	NA	False	AATAAA	-21	NA	157266135	157304782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
transcript_77517.known	chr5	+	580	6	FSM	ENSG00000055163.20	ENST00000522637.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	143.606963619457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGGCTGACATT	157262350	True	NA	NA	False	NA	NA	NA	157266127	157304274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157266196_157285338_157285479_157287018_157287075_157300714_157300897_157302793_157302891_157304237
transcript_77518.known	chr5	+	2885	6	FSM	ENSG00000113272.14	ENST00000231198.12	2885	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	7.73045923603508	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTTTTCATTTATTT	157730038	True	NA	5	True	AATAAA	-17	NA	157731419	157741449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157731632_157732867_157733045_157734575_157734746_157735845_157735935_157737886_157737995_157739320
transcript_77521.known	chr5	+	919	6	FSM	ENSG00000113272.14	ENST00000521655.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	45.2221184819995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGTGCGAATGACA	157730038	True	NA	NA	False	NA	NA	NA	157731419	157739578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157731632_157732867_157733045_157734670_157734746_157735845_157735935_157737886_157737995_157739320
transcript_77524.known	chr5	-	3952	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	157.433601378407	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTTAATTCTTT	-157843267	True	NA	NA	False	AGTAAA	-13	NA	157859145	157785746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_77526.known	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	132.906292720202	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-157843265	True	NA	-107	True	NA	NA	NA	157859143	157787404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_77535.nic	chr5	-	678	5	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-47	25717	-45	-21364	5prime_fragment	FALSE	canonical	3	786	junction_2	51.3955250970354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAACAAAGACAAGTATG	-157843312	True	NA	NA	False	AAGAAA	-6	NA	157859190	157813121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_77536.known	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	260.422320709971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	-157843255	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
transcript_77539.known	chr5	+	2179	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	16.4936351360153	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	159260742	True	NA	16	True	AATAAA	-16	NA	159263289	159286036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
transcript_77550.known	chr5	+	1441	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	77.8698547944857	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGTTAGGTTGTGAA	159996365	True	NA	22	True	AATAAA	-16	NA	160009138	160065543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_77552.known	chr5	+	2208	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	84.1044324370336	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	159996351	True	NA	NA	False	NA	NA	NA	160009124	160052548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
transcript_77553.known	chr5	+	1366	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	284.046015442725	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	159996353	True	NA	-10	True	NA	NA	NA	160009126	160065511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
transcript_77554.known	chr5	+	1283	7	FSM	ENSG00000113312.12	ENST00000684018.1	1283	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	272.161563536563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCTGTGCTTAGGTC	159996358	True	NA	6	True	NA	NA	NA	160009131	160065527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160051128_160051184_160064931
transcript_77556.known	chr5	+	901	6	FSM	ENSG00000113312.12	ENST00000683219.1	901	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	297.547038298149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTCCCTCTTTTATG	159996358	True	NA	NA	False	AAGAAA	-24	NA	160009131	160065200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160064931
transcript_77558.known	chr5	+	769	6	FSM	ENSG00000170231.16	ENST00000523955.5	769	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	31.4197390186488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	160213136	True	NA	8	True	AATAAA	-16	NA	160213726	160238716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160213820_160228472_160228693_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_77559.known	chr5	+	440	3	FSM	ENSG00000170231.16	ENST00000521362.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	NA	False	NA	8	True	AATAAA	-16	NA	160232034	160238716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160232274_160234819_160234910_160238605
transcript_77560.known	chr5	-	5709	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	23.1948270094864	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGATCTTTTATTTCTT	-160309831	True	NA	NA	False	ATTAAA	-16	NA	160312564	160249082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_77561.known	chr5	-	2385	3	FSM	ENSG00000145861.9	ENST00000393975.4	2385	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	-160370538	True	NA	NA	False	NA	NA	NA	160370641	160347779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160349782_160354767_160355021_160370511
transcript_77562.known	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-160398326	True	NA	-6	True	AATAAA	-17	NA	160400054	160393147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160395540_160399638
transcript_77569.known	chr5	-	3480	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_10	24.2565913149853	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTAGCATTATTTC	-160415827	True	NA	1	True	CATAAA	-20	NA	160419081	160401640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_7757.known	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	488.417196692225	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	155287335	True	NA	9	True	NA	NA	NA	155308888	155320647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_77574.nic	chr5	-	1629	15	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-40	2866	-40	-1354	5prime_fragment	FALSE	canonical	3	174	junction_9	25.1076254779869	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCATCGAAAGAGCA	-160415867	True	NA	NA	False	AAAAAG	-6	NA	160419121	160404506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_77577.known	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2919	junction_1	673.76001662313	3055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397282	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_77581.known	chr5	+	895	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1750.39195610583	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	160397331	True	NA	3	True	TTTAAA	-23	NA	160421903	160428704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_77582.known	chr5	+	670	6	FSM	ENSG00000164611.13	ENST00000519287.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_1	1751.17555944571	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397634	False	NA	28	True	AATAAA	-16	NA	160422206	160428739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160422237_160422339_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_77589.known	chr5	+	1070	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	3751	junction_4	394.274254168339	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397337	True	NA	28	True	AATAAA	-16	NA	160421909	160428739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_77593.nnic	chr5	+	705	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-319	-33035	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAG	162036235	True	NA	NA	False	AAAAAG	-23	NA	162036451	162061725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_162036955_162061523
transcript_77594.nnic	chr5	+	815	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-319	-32925	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAAG	162036235	True	NA	NA	False	AAGAAA	-44	NA	162036451	162061835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_162036955_162061523
transcript_77599.known	chr5	+	2366	8	FSM	ENSG00000113328.19	ENST00000393929.5	2366	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	1223.54516692691	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTGCTGGGTGGCTT	163430138	True	NA	13	True	AATAAA	-14	NA	163437570	163445014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163437665_163437764_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_77601.known	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_3	162.618162167289	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	163430162	True	NA	15	True	AATAAA	-16	NA	163437594	163445016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_77607.known	chr5	+	1071	6	FSM	ENSG00000113328.19	ENST00000511683.6	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	1331.07093725316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCTACTTAAATTTTAA	163437689	True	NA	NA	False	NA	NA	NA	163437765	163444078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163437805_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_77614.known	chr5	-	7967	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_3	56.0971379741328	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTGAGTCCAATTAA	-163450269	True	NA	NA	False	ATTAAA	-15	NA	163460102	163446525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
transcript_77616.nic	chr5	-	2054	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-270	347	combination_of_known_junctions	FALSE	canonical	3	129	junction_3	566.775087667057	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACCCCTTTGTCTAA	NA	False	NA	-7	True	AATAAA	-17	NA	163460372	163453575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163458994
transcript_77617.nic	chr5	-	1750	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-298	347	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	585.147844565799	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACCCCTTTGTCTAA	NA	False	NA	-7	True	AATAAA	-17	NA	163460400	163453575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163459326
transcript_77622.known	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	124.189970564967	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	163452171	True	NA	17	True	AATAAA	-26	NA	163460656	163491941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_77629.known	chr5	+	2872	17	FSM	ENSG00000072571.20	ENST00000353866.7	2872	17	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	80.4879649388652	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGATAATGCTCACTT	163460334	False	NA	NA	False	AAAACA	-27	NA	163460365	163491579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_77640.nic	chr5	+	998	9	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	-34	18385	-34	2093	5prime_fragment	FALSE	canonical	3	240	junction_3	96.3832681278239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTACAGTGTTTTATAG	163452112	True	NA	NA	False	AAAAAG	-6	NA	163460597	163473556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378
transcript_77647.known	chr5	+	2226	7	FSM	ENSG00000038274.17	ENST00000280969.9	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	108.294993215548	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	163503093	True	NA	18	True	AATAAA	-30	NA	163503113	163519336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163503425_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_77653.known	chr5	+	2064	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	143.033115823652	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	163500213	True	NA	36	True	AATAAA	-38	NA	163505618	163519354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_77674.nnic	chr5	-	833	4	NNC	ENSG00000253978.2	novel	590	3	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.33999733546454	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168269484	168229582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_168229861_168230885_168231057_168263259_168263433_168269273
transcript_77675.known	chr5	-	590	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGACTTCCTAGTGCTT	-168269067	True	NA	-8	True	GATAAA	-21	NA	168269415	168229583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_168229861_168230885_168231057_168269273
transcript_77676.known	chr5	+	3562	23	FSM	ENSG00000113645.15	ENST00000521089.5	3562	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	22.718225471965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACAGAAACAAAAAA	168292118	False	NA	-44	True	ATTAAA	-30	NA	168292149	168469216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467839_168467965_168468950
transcript_77677.known	chr5	+	7136	23	FSM	ENSG00000113645.15	ENST00000265293.9	7136	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	22.718225471965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTTTCCA	168289647	True	NA	5	True	AATAAA	-18	NA	168291644	168472303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467839_168467965_168468950
transcript_77678.known	chr5	+	3408	18	FSM	ENSG00000113645.15	ENST00000524228.5	3408	18	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_15	24.0918082532942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCCTCTTGCTCTCTT	168406268	False	NA	17	True	AATAAA	-17	NA	168406278	168469757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467842_168467965_168468950
transcript_7768.known	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	519.73450012221	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	155308761	False	NA	-29	True	GGGGCT	-32	NA	155308793	155320609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_77683.known	chr5	+	2122	15	FSM	ENSG00000113643.9	ENST00000231572.8	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_4	64.9720897692201	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGGTTCTTTAACA	168477042	True	NA	28	True	AGTAAA	-19	NA	168486470	168519301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_77688.known	chr5	+	1990	14	FSM	ENSG00000113643.9	ENST00000520013.5	1990	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	239.261734330404	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAATGTGGTTCTTTA	168477062	True	NA	25	True	AGTAAA	-16	NA	168486490	168519298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_77697.known	chr5	+	678	5	FSM	ENSG00000113643.9	ENST00000521939.5	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_4	37.3396572024972	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGAGGCTGAAGCAGGA	168477057	True	NA	NA	False	NA	NA	NA	168486485	168494736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549
transcript_77701.known	chr5	+	757	3	FSM	ENSG00000113643.9	ENST00000524082.5	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_2	13.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCAATTAAATATTTGAT	168477022	True	NA	NA	False	ATTAAA	-22	NA	168486450	168493187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658
transcript_77703.known	chr5	-	10274	7	FSM	ENSG00000120137.7	ENST00000239231.7	10274	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	19.0146142626022	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTTTTTATTATTT	-168573221	False	6147	-2	True	AATAAA	-20	NA	168579368	168548494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
transcript_77707.known	chr5	+	645	1	FSM	ENSG00000233913.7	ENST00000522551.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	168616257	False	NA	NA	False	NA	NA	NA	168616351	168616996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168616400_168617000
transcript_77719.known	chr5	+	2529	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_6	38.8770046120236	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576458	True	NA	38	True	AATAAA	-23	NA	169583772	169604778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_77721.nic	chr5	+	2646	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	112.011584406803	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576317	True	NA	38	True	AATAAA	-23	NA	169583631	169604778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596584_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_77722.nic	chr5	+	2810	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	16	junction_1	121.903362349306	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576454	True	NA	38	True	AATAAA	-23	NA	169583768	169604778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_169584167_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_77732.nnic	chr5	+	484	4	NNC	ENSG00000234511.10	novel	471	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.83176086632785	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	170232856	True	NA	NA	False	AATAAA	-18	NA	170232960	170246231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_170233008_170234125_170234199_170234976_170235071_170245961
transcript_77733.known	chr5	+	471	4	FSM	ENSG00000234511.10	ENST00000593851.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.39934634239519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	170232880	True	NA	NA	False	AATAAA	-18	NA	170232984	170246231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170233008_170234114_170234199_170234976_170235071_170245961
transcript_77735.nnic	chr5	+	472	2	NNC	ENSG00000234511.10	novel	2113	3	NA	NA	10406	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	170245301	True	NA	NA	False	AATAAA	-18	NA	170245337	170246231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_170245540_170245961
transcript_77736.known	chr5	-	4742	4	FSM	ENSG00000145936.9	ENST00000274629.9	4742	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAGTGCTTCCATCAT	-170389328	True	NA	NA	False	AATAAA	-16	NA	170389367	170374670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_170378974_170383678_170383851_170385313_170385472_170389258
transcript_77740.known	chr5	+	3304	10	FSM	ENSG00000094755.17	ENST00000265294.9	3304	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	10.2354986248236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	170783140	True	NA	11	True	AATAAA	-26	NA	170783724	170814047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170811955
transcript_77743.known	chr5	+	1567	9	FSM	ENSG00000094755.17	ENST00000519385.5	1567	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	7.08872343937891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCCCATGGAGCCCAAG	170783140	True	NA	NA	False	AATAGA	-36	NA	170783724	170812498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170811955
transcript_77750.nnic	chr5	-	1392	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	0	1675	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGTTTCTTGGTCTAT	-170767132	True	NA	0	True	AATAGA	-18	NA	170767558	170745371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170767307
transcript_77754.known	chr5	+	1199	7	FSM	ENSG00000204764.14	ENST00000443155.5	1199	7	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	14.3643076176102	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACTTTCAGACTTTCA	170859078	True	NA	NA	False	NA	NA	NA	170861869	170911409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968
transcript_77756.known	chr5	+	2182	6	FSM	ENSG00000204764.14	ENST00000519130.5	2182	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	11.9063008529098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACAAGGACTGCACT	170859231	True	NA	NA	False	NA	NA	NA	170862022	170911342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660
transcript_77758.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000517671.5	1338	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6262.79018693903	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTTTCTATTGACTT	171387030	True	NA	12	True	AATAAA	-21	NA	171387115	171410883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171387235_171387932_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_77767.known	chr5	+	2258	11	FSM	ENSG00000181163.14	ENST00000677325.1	2258	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	6517.66865988138	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTCCTTTTTGTTTAA	171388515	False	NA	-62	True	NA	NA	NA	171388611	171411810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_77771.known	chr5	+	1263	10	FSM	ENSG00000181163.14	ENST00000521672.6	1263	10	0	0	0	0	multi-exon	FALSE	canonical	1	249	junction_1	6784.13505135782	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	171387757	False	NA	2	True	AATAAA	-11	NA	171387798	171410873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_77773.known	chr5	+	2627	11	FSM	ENSG00000181163.14	ENST00000677672.1	2627	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	8280.2979632378	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	171388523	False	NA	13	True	AATAAA	-22	NA	171388619	171410884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_77776.known	chr5	+	2506	10	FSM	ENSG00000181163.14	ENST00000677600.1	2506	10	0	0	0	0	multi-exon	FALSE	canonical	1	249	junction_1	8607.20461927243	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933687	True	NA	-3	True	AATAAA	-6	NA	171387853	171410868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_77787.known	chr5	+	1237	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_7	6494.67981894545	2565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	170933662	True	NA	13	True	AATAAA	-22	NA	171387828	171410884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
transcript_77788.known	chr5	+	1346	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8314.60587915145	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	170933676	True	NA	16	True	AATAAA	-25	NA	171387842	171410887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
transcript_77789.known	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_9	6010.28371709689	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	170933660	True	NA	-16	True	AATATA	-6	NA	171387826	171410855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_77790.known	chr5	+	1289	11	FSM	ENSG00000181163.14	ENST00000678774.1	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6541.10403525276	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392983_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_77791.known	chr5	+	268	2	FSM	ENSG00000181163.14	ENST00000523339.1	268	2	0	0	0	0	multi-exon	FALSE	canonical	3	21912	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTCAGCCTTTTA	170933685	True	NA	72	True	AATAAA	-12	NA	171387851	171390163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050
transcript_77792.known	chr5	+	1072	8	FSM	ENSG00000181163.14	ENST00000679233.1	1072	8	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	9308.3274391421	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGACAATAATTTTGAA	170933676	True	NA	37	True	AATAAA	-26	NA	171387842	171406736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171405301_171405404_171406396
transcript_77793.known	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	20235	junction_9	888.46209198192	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_77794.known	chr5	+	3605	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1218.52367667489	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933661	True	NA	-3	True	AATAAA	-6	NA	171387827	171410868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
transcript_77795.known	chr5	+	1571	10	FSM	ENSG00000181163.14	ENST00000521260.2	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_4	1073.09750112167	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	170933685	True	NA	2	True	AATAAA	-11	NA	171387851	171410873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_77796.known	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	11	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	-172283676	False	1756	-8	True	AAAAAG	-11	NA	172283764	172209645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_172212228_172234121_172234359_172283595
transcript_77798.known	chr5	+	2903	10	FSM	ENSG00000113719.17	ENST00000393784.8	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	27.9329001999479	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGTGTGATTCTTTC	172821371	True	NA	18	True	ATTAAA	-18	NA	172834250	172952683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004_172924110_172926508_172926570_172932435_172932537_172935187_172935311_172950708
transcript_77801.known	chr5	+	586	6	FSM	ENSG00000113719.17	ENST00000523291.5	586	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	81.3668237059798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTGCTGTTTCTTTCTT	172821531	True	NA	NA	False	NA	NA	NA	172834410	172920571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172920363
transcript_77803.known	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	213.674726837052	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	172950045	True	NA	17	True	AATAAA	-17	NA	172959423	172969771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
transcript_77804.known	chr5	+	742	4	FSM	ENSG00000037241.7	ENST00000521476.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	442.362596369389	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACATAGTATTTGCATT	172958688	True	NA	23	True	AATAAA	-20	NA	172958892	172969721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172959008_172959864_172960042_172968458_172968600_172969412
transcript_77806.known	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	420.340602633415	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	172950081	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
transcript_77808.known	chr5	+	1419	4	FSM	ENSG00000113732.9	ENST00000519374.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_2	46.2625358386483	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCATGGCTTTTTGAC	172973729	True	NA	NA	False	ATTAAA	-25	NA	172983770	173035445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_172994774_172994823_173020237_173020368_173034398
transcript_77810.known	chr5	+	502	3	FSM	ENSG00000113732.9	ENST00000517669.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_2	50.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCTATCACCCTGC	172973789	True	NA	NA	False	NA	NA	NA	172983830	173020557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_172994774_172994823_173020237
transcript_77811.known	chr5	+	718	3	FSM	ENSG00000113732.9	ENST00000519911.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	691.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATCTGGGCTCGGT	172973739	True	NA	22	True	AATAAA	-16	NA	172983780	173034884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_172994774_172994823_173034398
transcript_77812.known	chr5	+	773	3	FSM	ENSG00000113732.9	ENST00000265093.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	650.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTCGGTGTTTGTAA	172973774	True	NA	30	True	AATAAA	-24	NA	172983815	173034892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_173020237_173020368_173034398
transcript_77813.known	chr5	+	7778	9	FSM	ENSG00000164463.12	ENST00000296953.6	7778	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	4.76805778069016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGAATTGTTTGCCTC	173056177	True	NA	NA	False	AATAAA	-18	NA	173056351	173139284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314_173091402_173108623_173108819_173110521_173110712_173112305_173112380_173123079_173123203_173133629
transcript_77814.known	chr5	+	1660	4	FSM	ENSG00000164463.12	ENST00000520420.5	1660	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAATTGGTTTTTCTA	173056193	True	NA	NA	False	ATTAAA	-21	NA	173056367	173091536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314
transcript_77815.nic	chr5	+	1881	4	NIC	ENSG00000164463.12	novel	559	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.64098759787715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAATTGGTTTTTCTA	173057136	True	NA	NA	False	ATTAAA	-21	NA	173057350	173091536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_173057684_173080584_173080785_173086500_173086627_173090314
transcript_77816.known	chr5	+	1168	6	FSM	ENSG00000113734.18	ENST00000351486.10	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	11.7711511756497	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGGGAATGTGTGTT	173143178	True	NA	36	True	AATAAA	-23	NA	173144530	173164387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_77817.known	chr5	-	4254	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	14.3372087784044	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTTGAGTAGCGTCAT	-173326166	True	NA	-34	True	AATAAA	-18	NA	173328414	173314722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
transcript_77818.known	chr5	-	1921	4	FSM	ENSG00000145919.11	ENST00000311086.9	1921	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_2	76.8678519712023	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTGGATAATATA	-173606999	True	NA	-39	True	NA	NA	NA	173616650	173607144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_173608293_173609237_173609435_173613130_173613256_173616199
transcript_77821.known	chr5	+	2511	5	FSM	ENSG00000185056.10	ENST00000340147.7	2511	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTCCTGCCTTCTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	173989169	174006140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173989589_173998152_173998239_173999699_173999800_174001195_174001232_174004270
transcript_77826.known	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_10	71.5558523113239	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	175468166	True	NA	NA	False	AATAAA	-18	NA	175478559	175529742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
transcript_7783.known	chr1	+	1198	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	716.354626297118	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	155287416	True	NA	-1	True	NA	NA	NA	155308969	155320637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_77837.nic	chr5	+	1008	7	ISM	ENSG00000164466.13	ENST00000321442.10	4066	11	-47	16004	-47	0	5prime_fragment	FALSE	canonical	3	678	junction_6	34.6586529199019	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTATGTGCAGTGGTG	175468119	True	NA	12	True	AATAAA	-15	NA	175478512	175513738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462
transcript_77841.known	chr5	+	527	2	FSM	ENSG00000164466.13	ENST00000507395.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGATAGCACCACCACCT	175468171	True	NA	NA	False	NA	NA	NA	175478564	175492546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175478640_175492094
transcript_77843.nnic	chr5	+	705	4	NNC	ENSG00000113749.8	novel	2561	3	NA	NA	8	-3135	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGGACACATTTTGG	175657558	True	NA	NA	False	NA	NA	NA	175658078	175683107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_175658156_175660005_175660143_175660599_175660692_175682708
transcript_77844.known	chr5	+	2561	3	FSM	ENSG00000113749.8	ENST00000377291.2	2561	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	39	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTGCCACTCTTGGGT	175657509	True	NA	5	True	TATAAA	-29	NA	175658029	175686242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175658156_175682708_175684310_175685408
transcript_77854.nic	chr5	-	1301	6	NIC	ENSG00000051596.10	novel	1796	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	431.863219086784	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAATAAGTAAATGTTAT	-175944302	True	NA	NA	False	AAAACA	-26	NA	175968317	175917872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_175918173_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_77858.known	chr5	-	1601	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	73.8013550011109	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	-175944300	True	NA	-5	True	AATAAA	-22	NA	175968315	175959530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_77863.known	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	1080	junction_2	66.0776058888335	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	-175944265	True	NA	NA	False	NA	NA	NA	175968280	175960218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_77870.known	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_6	33.6839631724059	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355619	True	NA	-4	True	AATAAA	-22	NA	176361764	176346061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
transcript_77871.known	chr5	-	2700	8	FSM	ENSG00000122203.15	ENST00000393725.6	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	197.364368307836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355620	True	NA	-4	True	AATAAA	-22	NA	176361765	176346061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359810_176359919_176361601
transcript_77872.known	chr5	-	2631	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	217.614656879744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	-176355662	True	NA	-7	True	AATAAA	-19	NA	176361807	176346064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
transcript_77874.nic	chr5	-	2398	6	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	221.324738788957	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355662	True	NA	-4	True	AATAAA	-22	NA	176361807	176346061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
transcript_77875.known	chr5	-	2243	5	FSM	ENSG00000122203.15	ENST00000393728.6	2243	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	254.568261965234	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355594	True	NA	-4	True	AATAAA	-22	NA	176361739	176346061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176359810_176359919_176361601
transcript_7788.nnic	chr1	+	1303	10	NIC	ENSG00000160752.15	novel	1478	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	127	junction_1	767.620823320382	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287360	True	NA	27	True	AATAAA	-16	NA	155308913	155320665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155309077_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_77882.known	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	1208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	176376312	True	NA	21	True	AATAAA	-25	NA	176388750	176389761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_176388974_176389330
transcript_77884.known	chr5	-	881	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_1	87.0875995765184	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGATTTTGTAT	-176370375	True	NA	-11	True	AATAAA	-15	NA	176388598	176383945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_77885.known	chr5	-	472	2	FSM	ENSG00000048162.22	ENST00000616685.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATTTTACTTCTCTG	-176370352	True	NA	-23	True	AATAAA	-3	NA	176388575	176383957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176384287_176388432
transcript_77886.known	chr5	+	4485	11	FSM	ENSG00000113194.13	ENST00000261942.7	4485	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	110.700496837187	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGCTGTGGATCTTTC	176440801	True	NA	26	True	ATTAAA	-22	NA	176448384	176510074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913_176499086_176500002_176500147_176506767
transcript_77892.known	chr5	+	337	3	FSM	ENSG00000113194.13	ENST00000506061.1	337	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTTTTTGTTCAT	176440845	False	NA	NA	False	NA	NA	NA	176448428	176453559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_176448471_176453175_176453229_176453317
transcript_77904.known	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	57.3142518871856	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	-177004382	False	NA	35	True	AATAGA	-14	NA	177006408	176905004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_77905.nic	chr5	-	2641	15	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	50.9673765205524	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004753	False	NA	-10	True	AATATA	-1	NA	177006779	176905049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_77906.known	chr5	-	2467	15	FSM	ENSG00000087206.17	ENST00000512031.5	2467	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.5072144814701	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	-177004689	True	NA	-13	True	TTTAAA	-2	NA	177006715	176905052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969596_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_77907.known	chr5	-	1945	15	FSM	ENSG00000087206.17	ENST00000506128.5	1945	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	62.1745813932717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004555	False	NA	-10	True	AATATA	-1	NA	177006581	176905049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969052_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_77912.nic	chr5	-	1904	14	NIC	ENSG00000087206.17	novel	1945	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	52.2546110759445	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004753	False	NA	-10	True	AATATA	-1	NA	177006779	176905049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_77913.nic	chr5	-	1816	14	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	50.6695992092267	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	NA	False	NA	-10	True	AATATA	-1	NA	177006802	176905049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_77915.nnic	chr5	-	1798	13	NIC	ENSG00000087206.17	novel	1945	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	52.1709263436596	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004753	False	NA	-10	True	AATATA	-1	NA	177006779	176905049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_77916.nnic	chr5	-	1710	13	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	50.4090903398275	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	NA	False	NA	-10	True	AATATA	-1	NA	177006802	176905049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_77922.known	chr5	-	1334	11	FSM	ENSG00000087206.17	ENST00000510698.2	1334	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	53.1548680743354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTAAATATATTTA	NA	False	NA	-26	True	NA	NA	NA	176970793	176905065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741
transcript_77925.known	chr5	+	2306	7	FSM	ENSG00000113761.12	ENST00000511834.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	44.9468822302751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	177019555	True	NA	10	True	AATAAA	-15	NA	177022731	177065965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050702_177050937_177062057_177062152_177064511
transcript_77926.known	chr5	+	4314	7	FSM	ENSG00000113761.12	ENST00000358149.8	4314	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	19.9722029052603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCTGAAAAAGGTATCA	177019519	True	NA	NA	False	AATAAA	-35	NA	177022695	177067985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_77930.nnic	chr5	+	2108	6	NIC	ENSG00000113761.12	novel	4314	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	43.4345484608739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	177019519	True	NA	10	True	AATAAA	-15	NA	177022695	177065965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177062057_177062152_177064511
transcript_77931.known	chr5	+	977	5	FSM	ENSG00000113761.12	ENST00000513587.5	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	53.5414559010119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGGCAGGGCAGGA	177019558	True	NA	NA	False	NA	NA	NA	177022734	177065018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177062057_177062152_177064511
transcript_77932.known	chr5	+	2638	18	FSM	ENSG00000160867.15	ENST00000502906.5	2638	18	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	61.6054529559684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGCCTGACACAGTGC	177079851	True	NA	NA	False	GGGGCT	-3	NA	177086913	177097732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_77933.nic	chr5	+	3074	18	NIC	ENSG00000160867.15	novel	3093	18	NA	NA	-30	0	combination_of_known_junctions	TRUE	canonical	3	107	junction_1	89.6561289220497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	177079812	True	NA	34	True	AATAAA	-19	NA	177086874	177098144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177087019_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_77934.known	chr5	+	3093	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	97.4215326162601	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	177079852	True	NA	34	True	AATAAA	-19	NA	177086914	177098144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_77943.nnic	chr5	+	1650	6	FSM	ENSG00000165671.22	ENST00000508896.6	1436	6	-214	0	-214	0	multi-exon	FALSE	canonical	3	58	junction_1	35.7860307941521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	177131602	False	NA	NA	False	GATAAA	-1	NA	177131615	177210453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177131935_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_77945.nic	chr5	+	1514	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-130	89698	2	0	5prime_fragment	FALSE	canonical	3	96	junction_1	20.6494551986245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	177129028	True	NA	NA	False	GATAAA	-1	NA	177133769	177210453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_77951.nic	chr5	+	917	4	NIC	ENSG00000165671.22	novel	1706	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	57.4862302353065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTGCTGTTCTTTAAA	177129030	True	NA	NA	False	ATTAAA	-17	NA	177133771	177137404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177133953_177135086_177135201_177135940_177136031_177136872
transcript_77953.nnic	chr5	+	1233	3	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-608	74107	-608	1	5prime_fragment	FALSE	canonical	3	58	junction_1	44	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTGGCCTGCCAGC	177131208	False	NA	NA	False	ATTAAA	-15	NA	177131221	177136346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177131935_177135086_177135201_177135940
transcript_77956.nic	chr5	+	754	3	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-135	102859	-49	1	5prime_fragment	FALSE	canonical	3	96	junction_1	25	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTGGCCTGCCAGC	177133682	False	NA	NA	False	ATTAAA	-15	NA	177133718	177136346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133953_177135086_177135201_177135940
transcript_77959.nnic	chr5	+	1434	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-69	74107	-69	1	intron_retention	FALSE	canonical	3	58	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTGGCCTGCCAGC	177131747	False	NA	NA	False	ATTAAA	-15	NA	177131760	177136346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177131935_177135086
transcript_7796.nnic	chr1	+	1152	9	NIC	ENSG00000160752.15	novel	1178	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	277	junction_8	858.49504039045	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287244	True	NA	27	True	AATAAA	-16	NA	155308797	155320665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155320408
transcript_77960.known	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	177129056	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177133953_177135086
transcript_77962.known	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	54.3179298206403	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301319	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_77963.known	chr5	-	1588	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	24.5381834898102	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-177301332	True	NA	-28	True	AATAAA	-23	NA	177303719	177301197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_77964.nic	chr5	-	1486	8	NIC	ENSG00000169228.14	novel	1236	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	50	junction_7	57.4889519110997	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301351	True	NA	-5	True	AATAAA	-22	NA	177303738	177301450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_77966.known	chr5	-	1820	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	20.2210011841375	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-177301346	True	NA	-28	True	AATAAA	-23	NA	177303733	177301197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_77968.nnic	chr5	-	1211	7	NNC	ENSG00000213347.11	novel	861	7	NA	NA	-405	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	34.0754880946537	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCCATAGTCTTGCCT	-177311792	True	NA	-8	True	ATTAAA	-17	NA	177312303	177307207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760_177311858_177312120
transcript_77973.known	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	99	junction_5	9.2217135067188	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	-177311798	True	NA	-5	True	ATTAAA	-20	NA	177312309	177307204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
transcript_77978.known	chr5	-	1608	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	19.2603219080056	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCCTTTCCCTGCT	-177301294	True	NA	-6	True	AATAAA	-21	NA	177303681	177301451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
transcript_77989.known	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2417	junction_4	143.625931374753	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-177325663	True	NA	-34	True	AATAAA	-14	NA	177351668	177331566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_77990.known	chr5	-	1149	8	FSM	ENSG00000169223.15	ENST00000515209.5	1149	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	926.98849694556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCGGGATTATAAAAG	-177325642	True	NA	-86	True	NA	NA	NA	177351647	177332030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177332270_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_78000.known	chr5	+	1536	11	FSM	ENSG00000169220.18	ENST00000511890.1	1536	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	70.6484960915659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCCACAATGGGGGAG	177366901	False	NA	NA	False	NA	NA	NA	177366942	177372298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177367035_177367413_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78003.nic	chr5	+	1854	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	359	-298	0	0	3prime_fragment	FALSE	canonical	3	136	junction_2	44.801895903446	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366004	True	NA	18	True	NA	NA	NA	177367301	177372596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78005.nnic	chr5	+	1745	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	72.1750259785197	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366001	True	NA	18	True	NA	NA	NA	177367298	177372596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177367558_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78015.known	chr5	+	1660	13	FSM	ENSG00000198055.11	ENST00000507633.5	1660	13	0	0	0	0	multi-exon	TRUE	canonical	3	448	junction_2	24.3441756666536	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGATGGGTCTGGCT	177419900	True	NA	19	True	AATAAA	-22	NA	177426744	177436685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392
transcript_78017.nic	chr5	-	1354	5	ISM	ENSG00000131187.10	ENST00000253496.4	2036	14	5101	0	9	0	intron_retention	FALSE	canonical	3	54	junction_4	24.7727168473706	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAAGCTCTTTTCTTC	-177404398	False	NA	-5	True	AATAAA	-19	NA	177404463	177402140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480_177403618_177403858
transcript_78018.known	chr5	-	1573	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	12.2836838484589	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	-177404407	False	NA	-36	True	NA	NA	NA	177404472	177402171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
transcript_78020.known	chr5	-	943	3	FSM	ENSG00000131187.10	ENST00000504406.5	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGCTTTGAAAATGCT	-177403685	False	NA	-27	True	NA	NA	NA	177403750	177402162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177402460_177402549_177402699_177403253
transcript_78023.known	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	93.625655210575	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	-177473601	False	NA	-39	True	AATAAA	-19	NA	177473741	177456607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_78031.known	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_8	115.940864338975	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488849	True	NA	-6	True	AATAAA	-17	NA	177497561	177483393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78038.known	chr5	-	1567	13	FSM	ENSG00000196923.14	ENST00000359895.6	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	146.883646317606	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488849	True	NA	-6	True	AATAAA	-17	NA	177497561	177483393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78041.known	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	94.4952600222184	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488892	True	NA	-6	True	AATAAA	-17	NA	177497604	177483393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_7805.nnic	chr1	+	1173	9	NIC	ENSG00000160752.15	novel	1417	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	277	junction_8	874.975392511127	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287244	True	NA	27	True	AATAAA	-16	NA	155308797	155320665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155320408
transcript_78050.nic	chr5	-	1070	9	NIC	ENSG00000196923.14	novel	977	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_3	143.544799191751	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	NA	False	NA	-19	True	AATAAA	-15	NA	177497649	177490245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78057.known	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	108.375951847149	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	-177488861	True	NA	-19	True	AATAAA	-15	NA	177497573	177490245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78067.known	chr5	-	2099	17	FSM	ENSG00000183258.12	ENST00000330503.12	2099	17	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_16	47.6339804525089	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-177508085	True	NA	-12	True	ATTAAA	-19	NA	177516961	177511576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_78084.known	chr5	+	2546	5	FSM	ENSG00000184840.12	ENST00000332598.7	2546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1478	junction_4	102.79713031014	3851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	177557867	True	NA	NA	False	NA	NA	NA	177592202	177597242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177592399_177592574_177592676_177593649_177593776_177594138_177594286_177595266
transcript_78096.known	chr5	+	1698	6	FSM	ENSG00000027847.14	ENST00000029410.10	1698	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	14.4637477854116	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGGCCAGACAAAATGT	177598146	True	NA	22	True	AAAAAG	-3	NA	177600131	177610330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177600261_177604178_177604542_177607301_177607528_177608538_177608623_177608909_177609015_177609539
transcript_78098.nic	chr5	+	663	3	NIC	ENSG00000027847.14	novel	552	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	87.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGCCTCTGGTCCCTTG	177598155	True	NA	8	True	ATTAAA	-20	NA	177600140	177605224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177600261_177604178_177604542_177605044
transcript_78105.known	chr5	+	1056	6	FSM	ENSG00000170089.16	ENST00000512851.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_5	176.620044162603	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTTGTAGGGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	177875594	177883831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_78107.nic	chr5	+	2501	5	ISM	ENSG00000170089.16	ENST00000506672.5	1570	6	-21	4	-21	0	intron_retention	FALSE	canonical	3	813	junction_1	123.65956291367	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	NA	False	NA	29	True	AATAAA	-22	NA	177875500	177884268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651
transcript_78111.nnic	chr5	-	715	4	Antisense	novelGene_ENSG00000145911.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_3	1.24721912892465	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATTAAAGTAAATTAATT	NA	False	NA	NA	False	AATAAA	-18	NA	178115305	178088499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_178088705_178091088_178091189_178093224_178093390_178115060
transcript_78113.known	chr5	+	4066	12	FSM	ENSG00000145916.19	ENST00000515098.5	4066	12	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	183.763862129618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	178130970	False	NA	4	True	ATTAAA	-15	NA	178130995	178150565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178131055_178131236_178131377_178135172_178135313_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_78117.known	chr5	+	3911	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	99.4024647581739	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	178126298	True	NA	7	True	ATTAAA	-18	NA	178131013	178150568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_78131.known	chr5	-	780	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	5726	junction_2	248.741275670569	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	-178117989	True	NA	NA	False	AGTAAA	-15	NA	178153885	178149462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
transcript_78135.known	chr5	-	599	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	2741	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATGCTAAGACTAAAAT	-178117933	True	NA	NA	False	ACTAAA	-30	NA	178153829	178149481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178149839_178153490_178153561_178153657
transcript_78136.known	chr5	-	2081	13	FSM	ENSG00000175309.15	ENST00000308158.10	2081	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	18.1588285843431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGTAGTTTCACTTAA	-178230757	True	NA	NA	False	ATTAAA	-45	NA	178232802	178208470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178208916_178211889_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447_178224565_178224641_178224730_178225354_178225430_178229939_178230100_178231404_178231524_178232491
transcript_78141.known	chr5	-	562	4	FSM	ENSG00000175309.15	ENST00000511716.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.2858495669176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTAGTTTTGTGAG	-178230496	False	NA	-10	True	AATAAA	-12	NA	178232541	178226465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178226699_178229939_178230100_178231404_178231524_178232491
transcript_78142.known	chr5	-	824	4	FSM	ENSG00000175309.15	ENST00000476170.2	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.2873766297015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCCCATGTGTTCCA	-178230526	False	NA	NA	False	NA	NA	NA	178232571	178228124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178228590_178229939_178230100_178231404_178231524_178232491
transcript_78147.nnic	chr5	-	2574	14	NIC	ENSG00000113240.14	novel	2780	15	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_11	32.8680345063055	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625337	True	NA	-5	True	CATAAA	-14	NA	178627085	178602663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178622392_178622460_178623255_178623417_178626945
transcript_78153.known	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	24.4237759843423	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625302	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
transcript_78154.nic	chr5	-	2475	13	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	26.8373444207052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625305	True	NA	-5	True	CATAAA	-14	NA	178627053	178602663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
transcript_78156.nic	chr5	-	1901	13	NIC	ENSG00000113240.14	novel	2780	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	26.8373444207052	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAAGGAATATTCT	-178625337	True	NA	-7	True	AGTAAA	-21	NA	178627085	178603269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
transcript_78161.nic	chr5	-	1665	13	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	6	-231	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	26.8373444207052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAATATTGTATGTTTT	-178625334	True	NA	-4	True	ATTAAA	-18	NA	178627082	178603502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
transcript_78164.nic	chr5	-	2505	12	NIC	ENSG00000113240.14	novel	2504	13	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625394	False	NA	-5	True	CATAAA	-14	NA	178627142	178602663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78165.nic	chr5	-	1820	12	NIC	ENSG00000113240.14	novel	2780	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAAGGAATATTCT	-178625315	True	NA	-7	True	AGTAAA	-21	NA	178627063	178603269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78166.nic	chr5	-	1707	12	NIC	ENSG00000113240.14	novel	1955	13	NA	NA	9	-127	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCATTTTTAAATACCTT	-178625331	True	NA	NA	False	ATTAAA	-21	NA	178627079	178603398	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78171.known	chr5	-	2521	5	FSM	ENSG00000169131.13	ENST00000335815.7	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	23.5902522241709	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTTGTTCTAGTA	-178728098	True	NA	80	True	ATTAAA	-16	NA	178730659	178711511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989_178729074_178730555
transcript_78173.known	chr5	+	2794	5	FSM	ENSG00000178338.11	ENST00000322434.8	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11.4537111889553	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTCTTTGTTGT	178858548	True	NA	-1	True	ATTAAA	-11	NA	178859952	178885020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708
transcript_78179.known	chr5	+	532	5	FSM	ENSG00000198939.8	ENST00000520805.5	532	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.58257569495584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTAGGGGAAACCTGGG	178895672	True	NA	NA	False	NA	NA	NA	178895914	178931339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178895975_178912589_178912720_178912978_178913072_178916564_178916711_178931236
transcript_78181.nnic	chr5	+	2279	4	NIC	ENSG00000198939.8	novel	2410	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTCTTTTACGATCT	178895655	True	NA	NA	False	TATAAA	-20	NA	178895897	178933212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_178895975_178912583_178912720_178912981_178913072_178931236
transcript_78184.known	chr5	+	2332	5	FSM	ENSG00000178187.8	ENST00000320129.7	2332	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.75925291729789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178940221	True	NA	NA	False	NA	NA	NA	178941190	178966433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178941387_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_78187.known	chr5	+	2383	5	FSM	ENSG00000178187.8	ENST00000519564.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	7.49583217528247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178940228	True	NA	NA	False	NA	NA	NA	178941197	178966433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178941445_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_78189.known	chr5	+	3252	5	FSM	ENSG00000234284.7	ENST00000444149.7	3252	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.86931583201704	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCCATGGTGGCGG	179023070	True	NA	NA	False	AATACA	-16	NA	179023803	179035064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179032204
transcript_78195.known	chr5	+	2636	18	FSM	ENSG00000176783.15	ENST00000319449.9	2636	18	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_1	31.8263019342444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179549921	True	NA	4	True	AATAAA	-16	NA	179550553	179610012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_78196.known	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	49.4023800611807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179559347	False	NA	4	True	AATAAA	-16	NA	179559691	179610012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_78198.known	chr5	+	2642	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	26.6398872698441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	179559347	False	NA	3	True	AATAAA	-15	NA	179559691	179610011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_7820.known	chr1	+	1196	9	FSM	ENSG00000160752.15	ENST00000611010.4	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	839.139738065121	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTCTGTTCTTGCTC	155308737	False	NA	28	True	AATAAA	-17	NA	155308747	155320666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_78210.known	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_13	77.8238034196365	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179605489	True	NA	-1	True	AATAAA	-21	NA	179623710	179614177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_78211.known	chr5	-	2248	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	79.9897922481696	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	-179623710	False	NA	-2	True	AATAAA	-20	NA	179623721	179614178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_78214.nic	chr5	-	2260	14	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	106.374964799499	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179623710	False	NA	-1	True	AATAAA	-21	NA	179623721	179614177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_78215.nic	chr5	-	2204	14	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	107.754432630307	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179605485	True	NA	-1	True	AATAAA	-21	NA	179623706	179614177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_78233.nic	chr5	-	2230	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	105.917682921954	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179623710	False	NA	-1	True	AATAAA	-21	NA	179623721	179614177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179617020_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_78234.nic	chr5	-	2166	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_3	107.381976555141	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179605477	True	NA	-1	True	AATAAA	-21	NA	179623698	179614177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179617020_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_78237.nic	chr5	-	2237	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	100.543902793202	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623710	False	NA	-4	True	AATAAA	-18	NA	179623721	179614180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_78238.nic	chr5	-	2149	13	NIC	ENSG00000169045.17	novel	2248	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	102.138352520273	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179605453	True	NA	-4	True	AATAAA	-18	NA	179623674	179614180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_78250.known	chr5	-	806	5	FSM	ENSG00000169045.17	ENST00000521116.5	806	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	124.447529103635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACTTCCCTTTGGATGT	-179634764	True	NA	NA	False	NA	NA	NA	179634784	179620942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179621036_179621241_179621398_179623036_179623165_179634064_179634158_179634448
transcript_78252.known	chr5	-	592	3	FSM	ENSG00000169045.17	ENST00000505087.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	61	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGGGTGTTGAAGCATA	-179605491	True	NA	NA	False	NA	NA	NA	179623712	179621010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179621398_179623036_179623165_179623635
transcript_78253.known	chr5	+	5103	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	1115.65559002568	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614286	True	NA	-8	True	AATAAA	-4	NA	179698955	179731622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78255.known	chr5	+	4207	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	787.52160968083	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	179614236	True	NA	33	True	ATTAAA	-18	NA	179698905	179730925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78262.known	chr5	+	4915	15	FSM	ENSG00000127022.16	ENST00000247461.9	4915	15	0	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_10	218.091677034766	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	179614297	True	NA	11	True	AATAAA	-23	NA	179698966	179731641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78269.known	chr5	+	4822	15	FSM	ENSG00000127022.16	ENST00000681476.1	4822	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	858.244672787048	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614274	True	NA	-8	True	AATAAA	-4	NA	179698943	179731622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699006_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78274.known	chr5	+	4854	14	FSM	ENSG00000127022.16	ENST00000680985.1	4854	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	900.355360481587	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614257	True	NA	-8	True	AATAAA	-4	NA	179698926	179731622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78287.known	chr5	+	855	5	FSM	ENSG00000127022.16	ENST00000502498.6	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	3099	junction_1	219.273231380394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCATTAATAGTTTT	179614269	True	NA	NA	False	NA	NA	NA	179698938	179708622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238
transcript_78291.known	chr5	+	597	2	FSM	ENSG00000225051.5	ENST00000442010.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGATTCTAAGTCGAA	179678863	False	NA	NA	False	NA	NA	NA	179679031	179694649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179679285_179694305
transcript_78292.known	chr5	+	5103	14	FSM	ENSG00000127022.16	ENST00000680614.1	5103	14	0	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_10	221.775861049797	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTCCTGTTCAAATT	179614253	True	NA	-4	True	CATAAA	-10	NA	179698922	179729954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679
transcript_78294.nnic	chr5	+	1984	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-295	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	131.646069063987	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	179806595	True	NA	33	True	ATTAAA	-23	NA	179807028	179837255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_78297.known	chr5	-	5155	21	FSM	ENSG00000197226.13	ENST00000355235.8	5155	21	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_13	26.6448400257911	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGTAAATGTGGTC	-179901266	True	NA	-31	True	AATAAA	-21	NA	179907897	179862070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_78299.nic	chr5	-	1318	8	ISM	ENSG00000161010.16	ENST00000522663.5	2879	9	-27	2143	-27	0	5prime_fragment	FALSE	canonical	3	27	junction_6	56.9729617217408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856703	True	NA	-16	True	AATAAA	-15	NA	179858887	179837275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
transcript_78300.nic	chr5	-	1538	8	NIC	ENSG00000197226.13	novel	532	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	96.9681201557018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATTGTATTCACACTT	-179901240	True	NA	-21	True	NA	NA	NA	179907871	179887670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179887905_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_78302.known	chr5	-	1168	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	20.9980157792746	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856633	True	NA	-16	True	AATAAA	-15	NA	179858817	179837275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_78304.known	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	57.6298533747918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856650	True	NA	-16	True	AATAAA	-15	NA	179858834	179837275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_78305.known	chr5	-	868	6	FSM	ENSG00000161010.16	ENST00000521299.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	56.3254826876788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGGAAGACCTCATGGG	-179856660	True	NA	NA	False	NA	NA	NA	179858844	179837526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179847977_179848067_179853377_179853438_179858730
transcript_78307.known	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	65.3466716826496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-179856624	True	NA	-6	True	AATAAA	-25	NA	179858808	179837265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_78311.known	chr5	+	921	3	FSM	ENSG00000161011.20	ENST00000506042.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCTAACCAGGGG	179805916	True	NA	110	True	AAAAAG	-17	NA	179806397	179813024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179806592_179811573_179811683_179812406
transcript_78316.known	chr5	+	1454	2	FSM	ENSG00000245317.2	ENST00000499601.2	1454	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTATTCAAATCTA	179858943	True	NA	NA	False	AATAAA	-17	NA	179859012	179861283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179859213_179860029
transcript_78317.known	chr5	-	1904	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	42.731538411342	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGAGTGTCAAAATGAT	-180067272	True	NA	NA	False	AATAAA	-16	NA	180071759	179955066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_78318.known	chr5	-	4799	12	FSM	ENSG00000050748.18	ENST00000452135.7	4799	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.9239192017114	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGCTCACTTTCTTT	-180289534	True	NA	NA	False	NA	NA	NA	180292083	180233142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180236527_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_78319.known	chr5	+	393	2	FSM	ENSG00000248367.2	ENST00000504573.2	465	2	69	3	69	0	multi-exon	FALSE	canonical	3	14	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	180293183	False	NA	NA	False	AATAAA	-18	NA	180293244	180295253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180293419_180295034
transcript_78321.known	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	182.90738397099	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-180337947	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_78324.nic	chr5	-	2240	18	ISM	ENSG00000131459.13	ENST00000253778.13	3034	19	-4	1612	-4	-1612	5prime_fragment	FALSE	canonical	0	0	junction_8	185.944367912764	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTTTCTTTTTTTTTTT	-180337951	True	NA	-3	True	AGTAAA	-30	NA	180353340	180302309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_78329.nnic	chr5	-	605	5	NNC	ENSG00000131459.13	novel	3034	19	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	338.461962412322	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-180337951	True	NA	-29	True	AATAAA	-15	NA	180353340	180300697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_180300908_180335895_180335954_180336478_180336578_180338492_180338601_180353210
transcript_78342.known	chr5	-	8445	2	FSM	ENSG00000131446.17	ENST00000307826.5	8445	2	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCCCAGATTAACTAT	-180799458	True	NA	NA	False	AATAAA	-26	NA	180802806	180784779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180793098_180802679
transcript_78343.known	chr5	-	534	2	FSM	ENSG00000131446.17	ENST00000505682.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCAATAACGTCTTTT	-180802572	False	NA	NA	False	NA	NA	NA	180802767	180795429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180795876_180802679
transcript_78347.known	chr5	+	1708	2	FSM	ENSG00000245060.8	ENST00000653411.1	1708	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	NA	False	NA	28	True	AATAAA	-38	NA	180830936	180835726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180831230_180834311
transcript_78348.known	chr5	+	1817	2	FSM	ENSG00000245060.8	ENST00000659553.1	1817	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCGATCATTTATGTG	180831255	False	NA	39	True	AATAAA	-33	NA	180831415	180835737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180831807_180834311
transcript_78349.known	chr5	-	1652	1	FSM	ENSG00000278970.3	ENST00000623091.1	1652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTATTTTCTTTGGTA	-180831157	True	NA	0	True	AGTAAA	-21	NA	180831605	180829953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180830000_180831600
transcript_78350.known	chr5	+	1738	3	FSM	ENSG00000245060.8	ENST00000661810.1	1738	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	180831542	True	NA	28	True	AATAAA	-38	NA	180831671	180835726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180831807_180832672_180832861_180834311
transcript_78357.nnic	chr5	-	795	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	33.0689515339624	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861290	False	NA	-36	True	AATAAA	-20	NA	180861301	180847610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_180848083_180851380_180851494_180860527_180860655_180861218
transcript_78361.nic	chr5	-	690	3	NIC	ENSG00000196670.14	novel	725	4	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861312	False	NA	-36	True	AATAAA	-20	NA	180861323	180847610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_180848083_180851380_180851494_180861218
transcript_78362.known	chr5	-	725	4	FSM	ENSG00000196670.14	ENST00000506377.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.3275853524323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858640	True	NA	-36	True	AATAAA	-20	NA	180861285	180847610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180848083_180851380_180851494_180851987_180852061_180861218
transcript_78363.known	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858631	True	NA	-36	True	AATAAA	-20	NA	180861276	180847610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180851494_180861218
transcript_78364.nnic	chr5	+	2022	8	NNC	ENSG00000113303.12	novel	700	5	NA	NA	-1492	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1.66598625567009	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTGCTTGTTTATTTC	180908044	True	NA	NA	False	NA	NA	NA	180908071	180950906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_180908278_180908585_180908934_180911338_180911615_180947511_180947626_180948354_180948376_180948919_180948947_180949238_180949266_180949903
transcript_78366.known	chr5	+	2696	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	6.80036013452109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	181220856	True	NA	9	True	AATAAA	-19	NA	181223289	181235808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_78368.known	chr5	+	1904	7	FSM	ENSG00000146063.20	ENST00000503114.1	1904	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	8.82704178457691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTCTGTTCCTTCA	181223772	False	NA	8	True	AATAAA	-18	NA	181224057	181235807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_7837.known	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	70.0311314702254	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155323788	False	NA	29	True	AATAAA	-15	NA	155323936	155331114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_78378.known	chr5	-	1150	8	FSM	ENSG00000204628.12	ENST00000511473.5	1150	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4542.10382343437	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCAAAAAAGCTCCATT	-181103489	True	NA	12	True	AATAAA	-41	NA	181243916	181236908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243679
transcript_78389.known	chr5	+	529	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	11	324	2	-4	multi-exon	FALSE	canonical	2	13	junction_2	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGGCTGGGTGCGG	181260403	True	NA	NA	False	NA	NA	NA	181261223	181264257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181261385_181263627_181263790_181264051
transcript_78391.known	chr5	+	672	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	181260401	True	NA	NA	False	AATAAA	-19	NA	181261221	181272307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181261385_181271572_181271690_181271915
transcript_78393.known	chr5	+	807	2	FSM	ENSG00000248275.3	ENST00000514146.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTGGGTGCGGTGGC	181260391	True	NA	NA	False	AAAAAG	-3	NA	181261211	181264261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181261385_181263627
transcript_78396.known	chr5	-	633	2	FSM	ENSG00000183718.6	ENST00000688015.1	2856	2	886	1337	-63	-97	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAATGACATGAAC	-181260209	False	NA	NA	False	AAAACA	-20	NA	181260257	181256483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181256860_181260000
transcript_78397.known	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5168.4446170971	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	-181103453	True	NA	-13	True	AATAAA	-16	NA	181243880	181236933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_78398.known	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	3733.40043064097	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	-181103462	True	NA	-5	True	AATAAA	-24	NA	181243889	181236925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
transcript_78399.known	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5023.37299530903	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103475	True	NA	-16	True	AATAAA	-13	NA	181243902	181236936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
transcript_78400.known	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8776	junction_1	823.336234812701	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	-181103520	True	NA	-1	True	NA	NA	NA	181243947	181236960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
transcript_78401.known	chr5	-	922	7	FSM	ENSG00000204628.12	ENST00000511900.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3981.10541600362	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTTTTCTGACTTT	-181103453	True	NA	15	True	AATAAA	-5	NA	181243880	181236944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181242169_181242346_181243691
transcript_78402.known	chr5	-	965	8	FSM	ENSG00000204628.12	ENST00000376817.8	965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4760.04238962432	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103476	True	NA	-16	True	AATAAA	-13	NA	181243903	181236936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242214_181243691
transcript_78403.known	chr5	-	564	4	FSM	ENSG00000204628.12	ENST00000626067.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5085.51256020472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGATCTCGGCTCACTGCA	-181103475	True	NA	NA	False	NA	NA	NA	181243902	181240312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181240346_181241491_181241640_181242173_181242346_181243691
transcript_78404.known	chr5	-	581	2	FSM	ENSG00000204628.12	ENST00000514318.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTCATTACTACATTT	-181103481	True	NA	NA	False	AGTAAA	-36	NA	181243908	181243041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181243406_181243691
transcript_78405.known	chr5	+	886	2	FSM	ENSG00000233937.8	ENST00000505151.6	1280	2	394	0	378	0	multi-exon	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	181246886	False	NA	8	True	AATAAA	-17	NA	181246900	181257586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181247387_181257186
transcript_78406.known	chr5	+	1046	3	FSM	ENSG00000233937.8	ENST00000506340.3	1061	3	14	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_1	12	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTTGTACTGTTAACT	181245404	True	NA	7	True	AATAAA	-16	NA	181246506	181257585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181246883_181247115_181247387_181257186
transcript_78407.known	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	49.5745161656796	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	290630	True	NA	16	True	AATAAA	-22	NA	292096	351355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
transcript_78408.known	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	40.557572248184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	292464	False	NA	16	True	AATAAA	-22	NA	292486	351355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
transcript_78409.known	chr6	+	587	7	FSM	ENSG00000112679.15	ENST00000603726.5	587	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	50.0288805480283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTAGTGATTTGTAA	292414	False	NA	NA	False	AAAAAG	-22	NA	292539	350950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768_348842_350821
transcript_78411.known	chr6	+	1166	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	35.2442903177238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGAGCAGTCTGTGCC	292376	False	NA	NA	False	NA	NA	NA	292461	349471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
transcript_78412.known	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	TRUE	canonical	2	320	junction_17	61.0457113577315	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-686615	True	NA	-20	True	AATAAA	-15	NA	693139	485153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_78416.known	chr6	-	536	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTTCTTTATGGCT	-686584	True	NA	NA	False	NA	NA	NA	693108	679142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_679515_689138_689213_693018
transcript_78417.known	chr6	-	1665	11	FSM	ENSG00000112699.11	ENST00000380815.5	1665	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	24.0518190580255	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGTCAGTGTGGAT	-2240745	True	NA	-17	True	ATTAAA	-24	NA	2245605	1623805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_1624232_1624471_1624541_1726415_1726513_1742467_1742587_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2245320
transcript_78424.known	chr6	-	2476	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	9.15453742990631	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCAGGCCTCTTC	-2840417	True	NA	-1	True	AATAAA	-24	NA	2841863	2832331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
transcript_78431.known	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	36.2950869035099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	-2890317	True	NA	-2	True	AATAAA	-24	NA	2903309	2887269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_78432.nic	chr6	-	1044	5	ISM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	5783	0	-5783	5prime_fragment	FALSE	canonical	3	370	junction_1	42.4286165223426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGGTAGTGTGATATG	-2890317	True	NA	NA	False	AAAAAG	-1	NA	2903309	2893052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_78433.nic	chr6	-	2878	4	NIC	ENSG00000170542.6	novel	4143	7	NA	NA	0	-5786	intron_retention	FALSE	canonical	3	400	junction_3	39.3643945152921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTAAGGTAGTGTGAT	-2890317	True	NA	NA	False	NA	NA	NA	2903309	2893055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_2895509_2896052_2896191_2900443_2900622_2903200
transcript_78434.known	chr6	-	1495	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	92.3176882052164	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2962077	False	947	-1	True	AATAAA	-28	NA	2962108	2948158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
transcript_78435.known	chr6	-	1638	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	73.5151156036786	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971574	False	NA	-1	True	AATAAA	-28	NA	2971605	2948158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
transcript_78436.known	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971098	True	NA	-1	True	AATAAA	-28	NA	2971585	2948158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
transcript_78437.known	chr6	-	1315	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971080	True	NA	-1	True	AATAAA	-28	NA	2971567	2948158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
transcript_78442.known	chr6	+	1508	10	FSM	ENSG00000124588.22	ENST00000338130.7	1508	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	603.652054141403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2987323	False	NA	16	True	AATAAA	-16	NA	2999973	3019755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3002049_3002287_3003668_3003790_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_7845.known	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	68.3893951939919	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155322357	True	NA	27	True	AATAAA	-13	NA	155324512	155331112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_78458.nnic	chr6	+	1238	7	NNC	ENSG00000124588.22	novel	1073	7	NA	NA	-74	-1195	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_6	446.764448252345	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATAGTGGTGTGTGGG	2987169	True	NA	NA	False	AATAAA	-28	NA	2999819	3018560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3018192
transcript_78459.known	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_4	105.311310989002	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2987243	True	NA	16	True	AATAAA	-16	NA	2999893	3019755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_78463.nnic	chr6	+	1115	7	NNC	ENSG00000124588.22	novel	1073	7	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	443.172433208064	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2987169	True	NA	16	True	AATAAA	-16	NA	2999819	3019755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_3000086_3006467_3006560_3010056_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_78465.known	chr6	+	1021	7	FSM	ENSG00000124588.22	ENST00000380441.5	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	591.131589035433	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999955	False	NA	16	True	AATAAA	-16	NA	2999988	3019755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_78470.known	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_4	367.097044390172	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999968	False	NA	16	True	AATAAA	-16	NA	3000001	3019755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_78481.known	chr6	+	1573	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	2988229	True	NA	9	True	AATAAA	-23	NA	2988647	2991173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_2988710_2989527_2989734_2989868
transcript_78488.known	chr6	+	1563	8	FSM	ENSG00000137274.13	ENST00000424847.6	1563	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114.415283694344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTACCCCTCCCTTCA	3118315	True	NA	16	True	NA	NA	NA	3118375	3152669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_78491.known	chr6	+	1909	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	22.1409625405542	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	3116655	True	NA	-11	True	AATAAA	-3	NA	3118710	3153578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_78497.known	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_2	37.1423687391576	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-3136531	True	NA	-11	True	AATAAA	-18	NA	3157544	3153665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
transcript_78498.known	chr6	-	817	4	FSM	ENSG00000137267.7	ENST00000489942.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	699.632919624443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATCTGCTTCCGCACC	-3136513	True	NA	NA	False	AAAACA	-37	NA	3157526	3154578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3155056_3155624_3155736_3156043_3156153_3157406
transcript_78500.known	chr6	-	2284	3	FSM	ENSG00000137267.7	ENST00000680036.1	2284	3	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_1	12	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTATACTAATAAAAAAG	-3136531	True	NA	-44	True	NA	NA	NA	3157544	3153698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3155736_3156043_3156153_3157406
transcript_78501.known	chr6	-	1620	3	FSM	ENSG00000230269.7	ENST00000425384.7	1620	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	3195784	3182629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3183727_3190826_3191231_3195665
transcript_78503.known	chr6	+	778	4	FSM	ENSG00000180822.12	ENST00000324987.4	778	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	309.134634459198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTGAGTGATAGA	3250159	True	NA	NA	False	NA	NA	NA	3258976	3267920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3259197_3263683_3263760_3264173_3264326_3267590
transcript_78504.known	chr6	+	629	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	299.031027747215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	3250134	True	NA	15	True	AATAAA	-15	NA	3258951	3267781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
transcript_78507.known	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2737	junction_3	60.4207469886517	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-3171414	True	NA	-17	True	AATAAA	-16	NA	3227653	3224276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
transcript_78509.known	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	50	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	3250129	True	NA	8	True	ATTAAA	-17	NA	3258946	3268049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3259197_3263683_3263760_3267590
transcript_78514.known	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	3250079	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3259197_3267590
transcript_78515.known	chr6	-	1765	2	FSM	ENSG00000228793.3	ENST00000666680.2	1766	2	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGCCTTGTGTTAT	NA	False	NA	NA	False	ATTAAA	-35	NA	3720081	3593489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3594536_3719362
transcript_78516.known	chr6	+	1643	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	3849129	True	NA	8	True	AATAAA	-18	NA	3849372	3851317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3849487_3849788
transcript_78518.known	chr6	+	1935	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGGTTAATTTATTT	3849142	True	NA	11	True	AATAAA	-21	NA	3849385	3851320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3849400_3851300
transcript_78523.known	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_4	31.5681963439181	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4010677	True	NA	6	True	AATAAA	-19	NA	4021299	4064983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
transcript_78525.known	chr6	-	1451	11	FSM	ENSG00000198721.13	ENST00000496241.6	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	257.847706989998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCACACAGGTGTTTGG	-4125435	True	NA	-14	True	AATAAA	-23	NA	4135591	4115699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130178_4130250_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_78529.known	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_9	122.710137224998	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125441	True	NA	-20	True	AATAAA	-17	NA	4135597	4115705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_78530.known	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	111.588529876507	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125419	True	NA	-20	True	AATAAA	-17	NA	4135575	4115705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_78540.nnic	chr6	-	1328	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	223.650396825045	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4135624	False	NA	-20	True	AATAAA	-17	NA	4135635	4115705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_78541.nnic	chr6	-	1326	9	NIC	ENSG00000198721.13	novel	1368	10	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	218.759249804437	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125467	True	NA	-20	True	AATAAA	-17	NA	4135623	4115705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_78545.known	chr6	-	1133	8	FSM	ENSG00000198721.13	ENST00000478266.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	246.796867641287	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125408	True	NA	-20	True	AATAAA	-17	NA	4135564	4115705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_78548.known	chr6	-	558	4	FSM	ENSG00000198721.13	ENST00000489086.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	173.636273732062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACAAAAGCTGTAGAG	-4125417	True	NA	NA	False	NA	NA	NA	4135573	4130317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4130561_4130766_4130866_4133548_4133702_4135510
transcript_78554.nic	chr6	+	2045	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-26	-117	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTCCAAACGTCATTA	4764983	True	NA	11	True	AATAAA	-14	NA	4772944	4954256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_78555.nic	chr6	+	3333	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4764983	True	NA	38	True	AATAAA	-20	NA	4772944	4955544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_78558.nnic	chr6	+	3267	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	89.2910347621131	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4764983	True	NA	38	True	AATAAA	-20	NA	4772944	4955544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_4773179_4891712_4892380_4935580_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_78562.nic	chr6	+	1514	5	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	21.6953335996476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTTTGGTTATTGTTT	4765068	True	NA	NA	False	AAAAAG	-26	NA	4773029	4943813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545
transcript_78565.known	chr6	+	773	2	FSM	ENSG00000153046.18	ENST00000483019.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACAGGCTTAGCTG	4765079	True	NA	-32	True	NA	NA	NA	4773040	4892347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_4773179_4891712
transcript_78568.known	chr6	-	1042	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	83.5615378762556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	-5002797	False	861	-36	True	NA	NA	NA	5003658	4995077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
transcript_78569.known	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	44.3395985547907	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-5003176	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_78571.known	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	81.1521205309305	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-5003175	True	NA	-5	True	AATAAA	-24	NA	5004036	4995046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
transcript_78573.known	chr6	-	1056	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	73.1110266801269	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACGCTTGCTTTCAG	-5003202	True	NA	-7	True	AATAAA	-22	NA	5004063	4995048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_78581.known	chr6	+	1732	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCCTCTCGCTCTGCCT	5003549	True	NA	NA	False	AAAAAG	-14	NA	5003777	5043962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_5003960_5021380_5021474_5042505
transcript_78584.known	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	47	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-5256420	True	NA	-7	True	AATAAA	-22	NA	5260950	5108418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_5109492_5216617_5216739_5260647
transcript_78586.known	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	315.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	-5260632	False	NA	-3	True	AATAAA	-17	NA	5260737	5186599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_5186981_5216617_5216739_5260647
transcript_78591.known	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_3	13.3218700722617	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260093	True	NA	9	True	AATAAA	-20	NA	5261512	5771583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_78594.nnic	chr6	+	1042	6	NIC	ENSG00000145982.13	novel	1679	7	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.9321238350678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260097	True	NA	9	True	AATAAA	-20	NA	5261516	5771583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_5261661_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_78595.nnic	chr6	+	886	5	NIC	ENSG00000145982.13	novel	1679	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51.3389472038529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260093	True	NA	9	True	AATAAA	-20	NA	5261512	5771583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_5261661_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_78596.known	chr6	-	1582	3	FSM	ENSG00000124785.9	ENST00000244766.7	1582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTGTCGTTTGTTTCC	-6006912	True	NA	NA	False	AATAAA	-16	NA	6006925	5997998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_5999205_6002352_6002498_6006694
transcript_78597.known	chr6	-	1808	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	329.489841354108	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGAATCTCTTGCTG	-7300281	True	NA	NA	False	AATAAA	-22	NA	7313207	7268305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_78598.known	chr6	-	1640	10	FSM	ENSG00000124783.14	ENST00000650389.1	1640	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	291.347232484785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGGCCGAGCAGTGC	-7300294	True	NA	NA	False	NA	NA	NA	7313220	7268532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7269155_7287861_7287923_7289867_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_78600.known	chr6	-	3248	9	FSM	ENSG00000124783.14	ENST00000397511.6	3248	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	303.367351572314	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTATAGCTTCCTC	-7300272	True	NA	-11	True	CATAAA	-14	NA	7313198	7287569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_78602.known	chr6	-	9661	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_4	13.3920475945805	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTGCAACATGAAATG	-7300273	True	NA	-14	True	ATTAAA	-17	NA	7313199	7281142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_78604.known	chr6	-	1893	8	FSM	ENSG00000124783.14	ENST00000489567.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	241.935477989906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGTAAAATAGTATGAA	-7300248	True	NA	-27	True	NA	NA	NA	7313174	7288681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301369_7303549_7303638_7309916_7310030_7313041
transcript_78612.known	chr6	-	1118	8	FSM	ENSG00000124783.14	ENST00000479365.5	1118	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	246.187749823717	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTTTTTAAACC	-7300256	True	NA	-55	True	NA	NA	NA	7313182	7289675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295384_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_78613.known	chr6	-	1094	7	FSM	ENSG00000124783.14	ENST00000462112.1	1094	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	260.753661953619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAAAAGAACTAATACA	-7300262	True	NA	NA	False	AATAAA	-13	NA	7313188	7296882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7297210_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_78621.known	chr6	+	2498	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	39.9107891897667	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	7384043	True	NA	10	True	CATAAA	-17	NA	7389807	7418037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
transcript_78624.nnic	chr6	+	2171	17	NNC	ENSG00000124784.9	novel	2498	17	NA	NA	-13	-339	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	103.292666729057	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTATATTTTTTTCT	7384015	True	NA	5	True	AATAAA	-16	NA	7389779	7417698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414253_7414391_7417330
transcript_78630.nic	chr6	+	1819	16	ISM	ENSG00000124784.9	ENST00000379834.7	2498	17	-28	3647	-13	2823	5prime_fragment	TRUE	canonical	3	327	junction_3	41.0607138542698	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATGAAATACCTTC	7384015	True	NA	NA	False	GATAAA	-4	NA	7389779	7414390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237
transcript_78643.nnic	chr6	-	939	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-28	0	-28	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	-7543095	True	NA	-1	True	AATAAA	-18	NA	7543109	7540453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7541054_7542770
transcript_78645.known	chr6	+	4174	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	12.9801531192818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	7585787	True	NA	9	True	ATTAAA	-22	NA	7590197	7611967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
transcript_78652.nic	chr6	+	996	8	ISM	ENSG00000168566.13	ENST00000342415.6	4174	9	-14	5821	-14	725	5prime_fragment	FALSE	canonical	3	97	junction_1	11.1702958870426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAAAGATAAGGATAAA	7590158	False	NA	-4	True	CATAAA	-8	NA	7590183	7606146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030
transcript_78653.known	chr6	-	3030	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	495.681097077546	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTCTGGTCTTTCCTT	-8059357	True	NA	-8	True	AATAAA	-12	NA	8064364	7881521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_78654.nnic	chr6	-	2196	4	NIC	ENSG00000188428.20	novel	2445	6	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	125.573351737806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTTTTT	-8059392	True	NA	NA	False	ATTAAA	-20	NA	8064399	8013980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_8015829_8041138_8041269_8062533_8062617_8064264
transcript_78655.known	chr6	-	1301	10	FSM	ENSG00000239264.9	ENST00000473453.2	1301	10	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_9	305.886971782345	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTTGGAGGTCACC	-7910063	False	15697	NA	False	NA	NA	NA	7910077	7883143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7909812
transcript_78662.known	chr6	-	2445	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	133.63382805263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTTTTTCAA	-8059386	True	NA	NA	False	ATTAAA	-23	NA	8064393	8013977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
transcript_78664.known	chr6	-	1273	6	FSM	ENSG00000188428.20	ENST00000627748.2	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	136.877463448151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCATATTTTACAGTGCA	-8059389	True	NA	NA	False	NA	NA	NA	8064396	8015062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8054269_8054373_8062533_8062617_8064264
transcript_78668.known	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	34.2810078614967	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-8059382	True	NA	-1	True	AATAAA	-13	NA	8064389	8013566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_78680.known	chr6	-	368	4	FSM	ENSG00000188428.20	ENST00000543936.7	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	135.884755092934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGCCATGGAAAGGCT	-8059378	True	NA	NA	False	NA	NA	NA	8064385	8015723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8062533_8062617_8064264
transcript_78682.known	chr6	-	562	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	891.462219552174	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-8081972	True	NA	2	True	CATAAA	-16	NA	8102548	8073359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
transcript_78684.known	chr6	-	591	4	FSM	ENSG00000124802.12	ENST00000502429.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	854.448880208108	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTATTTTGAATTTT	-8081905	False	NA	NA	False	NA	NA	NA	8102481	8078493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8078741_8090185_8090282_8097266_8097468_8102434
transcript_78685.known	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1549	junction_1	189.436591560929	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-8081972	True	NA	-2	True	AGTAAA	-17	NA	8102548	8079394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
transcript_78697.known	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	118	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-8081983	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8090282_8097266_8097468_8102434
transcript_78705.known	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_4	12.8296531519757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	-8432358	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_78706.nnic	chr6	-	1859	11	NNC	ENSG00000124786.12	novel	2137	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	27.8174405724179	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432380	True	NA	-1	True	AATAAA	-24	NA	8435567	8413067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435438
transcript_78711.nic	chr6	-	1903	10	NIC	ENSG00000124786.12	novel	2200	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	21.1660104885167	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432374	True	NA	-1	True	AATAAA	-24	NA	8435561	8413067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_78712.nnic	chr6	-	1791	10	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_9	28.4505201844436	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432358	True	NA	-1	True	AATAAA	-24	NA	8435545	8413067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435438
transcript_78716.nnic	chr6	-	1810	9	NIC	ENSG00000124786.12	novel	2200	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	35.8460248842183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432374	True	NA	-1	True	AATAAA	-24	NA	8435561	8413067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_78720.nnic	chr6	-	2420	5	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	-26	-11937	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	41.0327613011847	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGAATTTATTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	8435587	8425010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8426724_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_78729.nic	chr6	-	967	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	-42	18047	-26	-16408	5prime_fragment	FALSE	canonical	3	81	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	NA	False	NA	-9	True	AATAAA	-19	NA	8435587	8429481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_8430158_8434384_8434431_8435342
transcript_78730.known	chr6	+	1368	3	FSM	ENSG00000285219.3	ENST00000646488.1	1368	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAGTAATGATATCA	8435479	True	NA	NA	False	AATAAA	-16	NA	8435637	8470725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_8436179_8437939_8438032_8469990
transcript_78731.known	chr6	+	1623	3	FSM	ENSG00000285219.3	ENST00000644038.1	1623	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTTTTGTGATTTT	8435481	True	NA	NA	False	AATAAA	-24	NA	8435639	8471005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_8436179_8437962_8438032_8469990
transcript_78732.known	chr6	+	1108	5	FSM	ENSG00000111846.20	ENST00000397423.7	1108	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	130.637619007696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGTAGATAATACTGT	10521284	True	NA	NA	False	AGTAAA	-5	NA	10521331	10626947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10521418_10527473_10527661_10528630_10528842_10621350_10621444_10626416
transcript_78733.known	chr6	+	4579	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_1	85.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10553698	True	NA	14	True	AATAAA	-19	NA	10555808	10629368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10557343_10621350_10621444_10626416
transcript_78735.known	chr6	+	4200	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	59	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10582144	True	NA	14	True	AATAAA	-19	NA	10585759	10629368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10586915_10621350_10621444_10626416
transcript_78739.nic	chr6	-	539	4	NIC	ENSG00000137434.12	novel	541	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCGTCTTTTGTTTTG	-10694302	True	NA	5	True	ATTAAA	-21	NA	10694606	10671417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_10671599_10683186_10683233_10686965_10687165_10694493
transcript_78749.known	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	66.3829146544854	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686696	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_78756.nnic	chr6	+	1409	9	NIC	ENSG00000111845.5	novel	1523	10	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	264.158569802306	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686647	True	NA	29	True	TATAAA	-23	NA	10694922	10709782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10695070_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_78764.known	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	97.5512173168536	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	10712726	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_78767.known	chr6	+	1177	6	FSM	ENSG00000111843.14	ENST00000541412.5	1177	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	411.169356834869	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	10722869	False	NA	NA	False	AATAAA	-8	NA	10722914	10731119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10724555_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_78774.known	chr6	+	899	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	433.327459896093	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	10712781	True	NA	NA	False	AATAAA	-18	NA	10723124	10731129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_78777.known	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	473.738558935435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	10712765	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
transcript_78778.nnic	chr6	+	878	3	NIC	ENSG00000111843.14	novel	899	5	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	511.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	10722944	False	NA	NA	False	AATAAA	-18	NA	10722966	10731129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10723242_10728639_10728728_10730614
transcript_78779.known	chr6	-	1150	2	FSM	ENSG00000272097.2	ENST00000659819.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATCTATACTTAACTT	-10747587	True	NA	NA	False	AATAAA	-25	NA	10747619	10743323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_10744315_10747460
transcript_78787.known	chr6	+	929	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	94.3071577347128	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	10738114	True	NA	NA	False	AATAAA	-18	NA	10747804	10756981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_78800.known	chr6	+	992	5	FSM	ENSG00000137210.14	ENST00000475942.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	100.924167076077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGGTGGTGCACGCCT	10738114	True	NA	NA	False	AATACA	-11	NA	10747804	10755810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141
transcript_78802.nnic	chr6	+	877	5	NIC	ENSG00000137210.14	novel	929	6	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	375.410691776353	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGTGTCTTCA	10738073	True	NA	NA	False	AATAAA	-16	NA	10747763	10756979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10756466
transcript_78805.known	chr6	+	787	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	347.737329028679	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	10738120	True	NA	NA	False	NA	NA	NA	10747810	10756947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
transcript_78808.known	chr6	+	559	5	FSM	ENSG00000137210.14	ENST00000473807.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	461.185700125232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCTCCTGCCTGGGCT	10738110	True	NA	NA	False	NA	NA	NA	10747800	10802536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10802330
transcript_78809.known	chr6	+	502	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	440.504540271721	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	10738120	True	NA	-33	True	NA	NA	NA	10747810	10829165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
transcript_78811.known	chr6	+	888	5	FSM	ENSG00000137210.14	ENST00000612333.4	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	347.891506076248	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	10738068	True	NA	NA	False	AATAAA	-8	NA	10747758	10756971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10751132_10751235_10755141_10755233_10756466
transcript_78815.known	chr6	+	559	4	FSM	ENSG00000137210.14	ENST00000461342.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	396.664705877507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTATTGCAAAGCTAT	10738114	True	NA	NA	False	NA	NA	NA	10747804	10755479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141
transcript_78819.known	chr6	+	730	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	378.465615640605	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	10738126	True	NA	NA	False	AATAAA	-10	NA	10747816	10756973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
transcript_78824.known	chr6	+	455	4	FSM	ENSG00000137210.14	ENST00000480194.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	362.189944028759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	10738082	True	NA	NA	False	NA	NA	NA	10747772	10756615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747886_10751132_10751235_10755141_10755233_10756466
transcript_78826.known	chr6	+	871	5	FSM	ENSG00000137210.14	ENST00000491103.5	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	337.122381339477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTTTACTATAAATA	10738082	True	NA	NA	False	AATGAA	-1	NA	10747772	10756958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_78829.nnic	chr6	+	705	3	NIC	ENSG00000137210.14	novel	888	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	429	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	10738068	True	NA	NA	False	AATAAA	-18	NA	10747758	10756981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10749201_10749269_10756466
transcript_78830.nnic	chr6	+	451	3	NIC	ENSG00000137210.14	novel	752	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	23	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCTTTGCAGGTATTTT	10738068	True	NA	8	True	AATAAA	-23	NA	10747758	10829206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_78835.nnic	chr6	+	418	3	NIC	ENSG00000137210.14	novel	374	3	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	23	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	10738098	True	NA	5	True	AATAAA	-20	NA	10747788	10829203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_78837.known	chr6	+	2909	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.49030288683336	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	10886268	True	NA	117	True	AATAAA	-25	NA	10887051	10974309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
transcript_78841.known	chr6	-	4522	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.04841577054135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	-11230890	True	NA	-3	True	ATTAAA	-23	NA	11232668	11183297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_78842.known	chr6	-	3341	3	FSM	ENSG00000111859.17	ENST00000379433.5	3341	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGAGGAAGGAGGGCA	-11230880	True	NA	NA	False	NA	NA	NA	11232658	11198307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_11201047_11213280_11213728_11232503
transcript_78844.known	chr6	+	585	4	FSM	ENSG00000095951.17	ENST00000487103.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTAGATGGAGATCCGAA	12011552	True	NA	NA	False	NA	NA	NA	12011999	12120222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889
transcript_78845.known	chr6	+	2035	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGGAATCATTACTG	12290285	True	NA	8	True	AATAAA	-20	NA	12290360	12297194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
transcript_78846.known	chr6	+	615	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	769	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGTAAAGTCTGTAAAA	12512043	True	NA	NA	False	NA	NA	NA	12514109	12514724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12514100_12514700
transcript_78847.known	chr6	+	3045	13	FSM	ENSG00000112137.19	ENST00000675203.2	3045	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.986013297183269	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTCCAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	13013553	13287837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13014140_13053364_13053530_13160203_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
transcript_78854.known	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	234.611793986473	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323097	True	NA	0	True	AATAAA	-16	NA	13328537	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_78855.nic	chr6	-	1280	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	230.975835824213	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323115	True	NA	0	True	AATAAA	-16	NA	13328555	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_78856.known	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.376388884492	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323091	True	NA	0	True	AATAAA	-16	NA	13328531	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_78858.nic	chr6	-	1316	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	256.270424770875	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323074	True	NA	0	True	AATAAA	-16	NA	13328514	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328295
transcript_78859.nnic	chr6	-	1311	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	248.327795217432	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323089	True	NA	0	True	AATAAA	-16	NA	13328529	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
transcript_78860.nic	chr6	-	1194	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	252.242756413867	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323112	True	NA	0	True	AATAAA	-16	NA	13328552	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
transcript_78862.nic	chr6	-	1211	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	256.761670729016	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323107	True	NA	0	True	AATAAA	-16	NA	13328547	13304950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328295
transcript_78864.known	chr6	-	1084	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	245.633025738261	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323143	False	NA	-3	True	AATAAA	-13	NA	13328583	13304953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
transcript_78868.known	chr6	-	1027	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	253.13237643573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323143	False	NA	-3	True	AATAAA	-13	NA	13328583	13304953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_78885.known	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.9184185719581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_78888.nnic	chr6	+	1638	10	NNC	ENSG00000124523.17	novel	2339	10	NA	NA	1	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.1084033058909	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTTGTCATTACTTTAA	13572676	True	NA	NA	False	AATAAA	-19	NA	13574594	13601637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13601080
transcript_78889.known	chr6	+	2339	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	62.1880858741557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	13572682	True	NA	27	True	AATAAA	-24	NA	13574600	13605739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
transcript_78890.nic	chr6	+	1402	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	0	-188	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	30.134677125068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGGTATCTTTGATGTG	13572665	True	NA	9	True	NA	NA	NA	13574583	13612099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_78891.nic	chr6	+	1529	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	2	-114	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	30.134677125068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATTCTGATTATATTT	13574486	False	NA	2	True	NA	NA	NA	13574530	13612173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_78892.nic	chr6	+	1699	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	30.134677125068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAATTTATTGTATAAA	13574430	True	NA	3	True	AATAAA	-15	NA	13574474	13612287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_78894.known	chr6	+	4564	10	FSM	ENSG00000124523.17	ENST00000606117.2	4564	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	58.8049716551077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	13572682	True	NA	NA	False	NA	NA	NA	13574600	13615158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574745_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_78898.known	chr6	+	4337	9	FSM	ENSG00000124523.17	ENST00000680402.1	4337	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	63.822018144211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	13572665	True	NA	NA	False	NA	NA	NA	13574583	13615158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13600833_13600950_13611789
transcript_78904.known	chr6	-	1045	1	FSM	ENSG00000261071.1	ENST00000566170.1	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCTTACACATATATT	-13614987	True	NA	-13	True	AATAAA	-16	NA	13615155	13614110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13614100_13615200
transcript_78909.known	chr6	+	1683	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	0	0	0	0	multi-exon	FALSE	canonical	3	1659	junction_7	116.960834191168	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	13583553	True	NA	64	True	AATACA	-22	NA	13615334	13621712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
transcript_78912.known	chr6	-	5471	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	33.7305499510459	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAACTTTTCATCATT	-13814522	False	NA	-5	True	AATAAA	-16	NA	13814568	13786556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
transcript_78914.known	chr6	+	2328	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	11.6270159542335	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTGTAAACCAGTTTG	14116343	True	NA	NA	False	AATAAA	-45	NA	14117771	14136906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
transcript_78926.nnic	chr6	+	1084	3	NNC	ENSG00000286277.1	novel	1296	3	NA	NA	-131562	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTCTCTCATCTCTT	14300110	False	NA	4	True	AATAAA	-15	NA	14300120	14502701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_14300301_14498056_14498166_14501906
transcript_78927.nnic	chr6	-	555	4	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-50	-7837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.42809041582063	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	-15020708	True	NA	NA	False	AATAAA	-21	NA	15022014	14880664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_14880802_14997415_14997476_15008924_15009085_15021816
transcript_78929.nnic	chr6	-	1369	3	NNC	ENSG00000234261.5	novel	1915	5	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	3.5	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	-15020713	True	NA	-4	True	AATAAA	-13	NA	15022019	14976212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_14977319_14997415_14997476_15021816
transcript_7893.known	chr1	+	1700	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	81.7447495661504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	155322366	True	NA	20	True	AATAAA	-20	NA	155324521	155330730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_78932.nic	chr6	+	1717	3	ISM	ENSG00000008083.14	ENST00000341776.7	6003	18	-93	110847	-93	-97198	5prime_fragment	FALSE	canonical	3	288	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCTTGTCAGTTCATCT	15213261	True	NA	NA	False	AAGAAA	-8	NA	15245975	15411195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_15246585_15374116_15374253_15410223
transcript_78934.known	chr6	-	1518	11	FSM	ENSG00000047579.20	ENST00000513680.5	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.5364418461056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAGCTAACAATAAA	-15661731	True	NA	-41	True	NA	NA	NA	15663058	15522842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15660382_15660522_15662813
transcript_78936.known	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	TRUE	canonical	1	55	junction_2	44.7735040695573	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661701	True	NA	-5	True	AATAAA	-17	NA	15663028	15522806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_78937.known	chr6	-	1404	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	66.0029928240258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-15661680	True	NA	-8	True	AATAAA	-14	NA	15663007	15522809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
transcript_78939.known	chr6	-	1306	9	FSM	ENSG00000047579.20	ENST00000515875.5	1306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	74.9306971474308	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTAACAATAAAGTGTGA	-15661703	True	NA	-35	True	NA	NA	NA	15663030	15522836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_78941.known	chr6	-	1880	9	FSM	ENSG00000047579.20	ENST00000338950.9	1880	9	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_1	47.4616621601056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTAGATTATCAAGGT	-15661648	True	NA	NA	False	NA	NA	NA	15662975	15523562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_78943.known	chr6	-	1305	8	FSM	ENSG00000047579.20	ENST00000622898.4	1305	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	67.5951332628047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-15661731	True	NA	-8	True	AATAAA	-14	NA	15663058	15522809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15662813
transcript_78948.nnic	chr6	-	644	3	Antisense	novelGene_ENSG00000214027.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGCATGAATTGAAATC	-15961368	True	NA	NA	False	AATAAA	-15	NA	15961497	15904349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_15904596_15960935_15961020_15961183
transcript_7895.known	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	106.406805060886	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322383	True	NA	29	True	AATAAA	-15	NA	155324538	155331114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_78950.known	chr6	+	3072	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	49.5098194525311	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	16126077	True	NA	15	True	AATAAA	-15	NA	16129085	16148248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_78956.known	chr6	+	635	2	FSM	ENSG00000229931.2	ENST00000450930.2	1032	2	0	397	0	-34	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCTTCTTCGGATGG	16761898	False	NA	NA	False	NA	NA	NA	16761911	16762618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_16762280_16762351
transcript_78958.known	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	12.4105130165249	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	17391304	True	NA	13	True	AATAAA	-22	NA	17393594	17557780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_78961.known	chr6	+	1812	12	FSM	ENSG00000112186.13	ENST00000378990.6	1812	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	24.0766681750865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAAACCTTTGAG	17391354	True	NA	NA	False	AAAAAG	-41	NA	17393644	17556795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_78965.known	chr6	+	1404	11	FSM	ENSG00000112186.13	ENST00000465994.5	1404	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	25.1507455157894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATACAGCACTGTTTC	17391421	True	NA	NA	False	NA	NA	NA	17393711	17556568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_78966.known	chr6	+	1430	10	FSM	ENSG00000112186.13	ENST00000489374.5	1430	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	28.8037206101513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGATGACTTGTGAAC	17391342	True	NA	-25	True	NA	NA	NA	17393632	17556659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_78969.known	chr6	+	1088	1	FSM	ENSG00000272269.1	ENST00000606771.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGGCTTCATTAATGTT	17706197	False	NA	NA	False	AATAAA	-28	NA	17706256	17707344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17706300_17707300
transcript_78970.known	chr6	-	2238	1	FSM	ENSG00000187566.6	ENST00000340650.6	2238	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGTTTGAGAAAGGC	-18122531	True	NA	35	True	NA	NA	NA	18122677	18120439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18120400_18122700
transcript_78972.nnic	chr6	-	1800	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.139981767183	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-18148375	True	NA	0	True	ATTAAA	-24	NA	18155143	18128310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_18128802_18130251_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_78974.nnic	chr6	-	1729	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.139981767183	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-18148319	True	NA	0	True	ATTAAA	-24	NA	18155087	18128310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_18128802_18130266_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_78983.known	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_8	32.4489984437116	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-18148309	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_78996.known	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	504.873092964955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	-18264207	False	NA	NA	False	NA	NA	NA	18264267	18225665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
transcript_78997.known	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1421	junction_10	101.068541099592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-18232395	True	NA	-5	True	ATTAAA	-23	NA	18264530	18223859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_79005.known	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.56224173112709	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20211350	True	NA	0	True	AATAAA	-42	NA	20212469	20099683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
transcript_79007.known	chr6	+	3272	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	16.9241444884717	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	20530329	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
transcript_79011.known	chr6	+	1673	6	FSM	ENSG00000145996.11	ENST00000613575.4	1673	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	44.1569926512212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	20530353	True	NA	NA	False	AATAAA	-16	NA	20534480	20559672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_20534575_20535086_20535200_20535350_20535395_20546345_20546524_20548592_20548706_20558541
transcript_79012.nic	chr6	+	1584	5	NIC	ENSG00000145996.11	novel	1673	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	37.2088699102781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	20530329	True	NA	NA	False	AATAAA	-16	NA	20534456	20559672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20558541
transcript_79023.known	chr6	+	1742	10	FSM	ENSG00000272168.9	ENST00000655154.1	1742	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	33.9545811378511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAGGTAAGACAG	21664060	True	NA	60	True	AAAAAG	-35	NA	21666387	22194435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_21666646_21668646_21668900_21783631_21783709_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22110746_22110819_22191566_22191657_22194044
transcript_79034.known	chr6	+	1455	3	FSM	ENSG00000272168.9	ENST00000659720.1	1455	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	52.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	21664076	True	NA	NA	False	NA	NA	NA	21666403	21784591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_21666646_21668646_21668900_21783631
transcript_79037.known	chr6	-	4715	10	FSM	ENSG00000146038.12	ENST00000378454.8	4715	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	3.2659863237109	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCTAAGGGTGTTT	-24357931	True	NA	NA	False	AATAAA	-21	NA	24358059	24171754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24174835_24178329_24178633_24205001_24205103_24278048_24278212_24288851_24288907_24290931_24291079_24301714_24301847_24301967_24302045_24353568_24353624_24357457
transcript_79040.known	chr6	+	3980	12	FSM	ENSG00000124532.15	ENST00000443868.6	3980	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	292.067070300161	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384647	True	NA	9	True	AATAAA	-22	NA	24402907	24426194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24410726_24410800_24412285_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_79053.known	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	28.318898283655	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	24384675	True	NA	5	True	AATAAA	-18	NA	24402935	24426190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_79055.nnic	chr6	+	1993	11	NNC	ENSG00000124532.15	novel	3939	11	NA	NA	-9	787	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_9	208.16426206244	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTATGGATTCCTAAT	24384666	True	NA	18	True	AATAAA	-20	NA	24402926	24424263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422964_24423051_24423583
transcript_79065.known	chr6	+	1740	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	29.3030146344479	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	24384693	True	NA	8	True	AATAAA	-15	NA	24402953	24423476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
transcript_79069.known	chr6	+	3821	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	240.070822883582	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384647	True	NA	9	True	AATAAA	-22	NA	24402907	24426194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_79081.known	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	64.4663995168543	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-24659663	True	NA	-9	True	AATAAA	-15	NA	24666899	24649978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
transcript_79085.known	chr6	-	714	2	FSM	ENSG00000111802.14	ENST00000480495.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTTCCAGGTTCCAGG	-24666755	False	7236	NA	False	NA	NA	NA	24666786	24665986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24666612_24666697
transcript_79087.known	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	665.740690259103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	24666904	False	NA	NA	False	AATAAA	-36	NA	24667034	24705065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
transcript_79088.known	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	49	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	24657928	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24667345_24697882_24698068_24701458
transcript_79090.known	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_2	77.5145147698158	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	-24719133	False	NA	-12	True	AATAAA	-41	NA	24719154	24704860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
transcript_79098.known	chr6	+	1263	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	216.53021344222	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	24757618	True	NA	35	True	AATATA	-19	NA	24774936	24786099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_79101.known	chr6	+	1133	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	232.733514752149	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	24757612	True	NA	31	True	AATATA	-15	NA	24774930	24786095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_79107.known	chr6	+	1039	7	FSM	ENSG00000112312.10	ENST00000620958.4	1039	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	454.708850682378	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTGTCTGTTTCTA	24758094	False	NA	29	True	AATATA	-13	NA	24775412	24786093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24775503_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_79114.known	chr6	-	2442	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	14.4570369426021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877355	24839358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_79115.nic	chr6	-	2253	14	NIC	ENSG00000111913.20	novel	2442	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	8.93169345247552	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	-24935133	True	NA	NA	False	AATAAA	-21	NA	24936053	24839358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_79116.known	chr6	-	3614	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	14.8937062280381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAAAAAGTGTGG	NA	False	NA	NA	False	AATAAA	-7	NA	24877365	24839372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_79117.known	chr6	-	2704	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.69963093301422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	-24935028	True	NA	NA	False	NA	NA	NA	24935948	24839978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_79120.known	chr6	+	9418	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.19522860933439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTTCACCTTTCTG	25962512	True	NA	NA	False	ATTAAA	-23	NA	25962801	25991231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
transcript_79123.known	chr6	+	4130	2	FSM	ENSG00000272462.4	ENST00000606723.2	4130	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCTAAATGTGTCAT	25992441	True	NA	NA	False	CATAAA	-13	NA	25992661	26001775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_25992919_25997902
transcript_79124.known	chr6	-	756	1	FSM	ENSG00000124610.5	ENST00000244573.5	756	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATTTCAGGAAAAGAGCT	-25956993	False	60794	NA	False	NA	NA	NA	26017787	26017031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26017000_26017800
transcript_79125.known	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	25940065	True	NA	NA	False	NA	NA	NA	26020450	26020958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26020400_26021000
transcript_79126.known	chr6	-	511	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAACGAAAGTAGCTGT	-25972231	True	NA	NA	False	NA	NA	NA	26032099	26031588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26031600_26032100
transcript_79127.known	chr6	-	527	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCATTAAATGAGCTG	-25993723	True	NA	NA	False	NA	NA	NA	26033618	26033091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26033100_26033600
transcript_79128.known	chr6	-	731	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATCTCAATAAAAGAGCT	-25992203	True	NA	1	True	NA	NA	NA	26056470	26055739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26055700_26056500
transcript_79130.nic	chr6	+	1466	2	ISM	ENSG00000010704.19	ENST00000483782.1	1245	3	80	794	1	-794	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAATTCAGAG	NA	False	NA	NA	False	NA	NA	NA	26087398	26092188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_26087517_26090840
transcript_79131.known	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	25998487	True	NA	25	True	AAAACA	-40	NA	26103932	26104337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26103900_26104300
transcript_79132.known	chr6	-	659	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTTTTATATGTATA	-25979544	True	NA	NA	False	ATTAAA	-18	NA	26123910	26114872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26115136_26123514
transcript_79138.nnic	chr6	+	1546	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	0	-127	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGAACTATGTGTA	26049675	True	NA	9	True	AATAAA	-18	NA	26124171	26138957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_79139.nnic	chr6	+	1698	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAGCATGTGTCATTA	26049675	True	NA	8	True	AATAAA	-17	NA	26124171	26139109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_79140.known	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	NA	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26124750_26138053
transcript_79143.known	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	26049706	True	NA	-17	True	AATAGA	-32	NA	26124202	26139084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26124634_26138053
transcript_79146.known	chr6	+	519	1	FSM	ENSG00000180573.10	ENST00000377791.4	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTTCAAAGGAAGAGCTA	26049675	True	NA	NA	False	NA	NA	NA	26124171	26124690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26124200_26124700
transcript_79147.known	chr6	+	787	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTCTCAGTAAAAGAGCT	26123069	True	NA	12	True	NA	NA	NA	26156328	26157115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26156300_26157100
transcript_79148.known	chr6	+	789	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	26132278	False	NA	5	True	AATAAA	-20	NA	26158145	26171349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26158560_26170974
transcript_79149.known	chr6	+	470	1	FSM	ENSG00000274290.3	ENST00000614097.3	470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCACAATTGGAGCTA	26163135	True	NA	NA	False	AGTAAA	-28	NA	26183760	26184230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26183800_26184200
transcript_79150.known	chr6	-	403	1	FSM	ENSG00000277157.2	ENST00000614247.2	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTCAGGAGAAAGAGTA	-26102104	True	NA	NA	False	NA	NA	NA	26189112	26188709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26188700_26189100
transcript_79151.known	chr6	-	948	2	FSM	ENSG00000282988.2	ENST00000635200.1	948	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCGTAAACTGGAACC	-26170692	True	NA	0	True	TATAAA	-18	NA	26199293	26196753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26197267_26198858
transcript_79152.known	chr6	-	1534	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	-4	-1041	-4	1041	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACAGTTTTGGCTGGCTG	-26202788	False	NA	NA	False	CATAAA	-28	NA	26216692	26215158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26215200_26216700
transcript_79153.known	chr6	-	494	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTCAGTTGAAAGCG	-26215424	True	NA	-2	True	NA	NA	NA	26250635	26250141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26250100_26250600
transcript_79154.known	chr6	+	2060	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	37	-1635	37	1635	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGTGAGTTAGTATT	26251587	False	NA	1	True	AATAAA	-17	NA	26251650	26253710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26251600_26253700
transcript_79155.known	chr6	-	2411	1	FSM	ENSG00000273983.2	ENST00000614378.2	496	1	-402	-1513	-402	1513	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCTTCAATAACAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	26271815	26269404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26269400_26271800
transcript_79156.known	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-26169771	True	NA	-8	True	AATAAA	-31	NA	26285534	26281054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26281588_26285033
transcript_79157.known	chr6	-	409	1	FSM	ENSG00000158406.6	ENST00000377727.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTCATAAAAGAGCAG	-26169771	True	NA	NA	False	NA	NA	NA	26285534	26285125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26285100_26285500
transcript_79158.nic	chr6	+	2726	8	NIC	ENSG00000124508.17	novel	2733	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	13.7261853136735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	26381940	True	NA	12	True	AATAAA	-17	NA	26383200	26393992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79159.known	chr6	+	1790	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	18.7834056158784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381835	True	NA	6	True	AATAAA	-16	NA	26383095	26394874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
transcript_79160.known	chr6	+	3583	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.72058619211657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381847	True	NA	6	True	AATAAA	-16	NA	26383107	26394874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79166.known	chr6	+	2733	8	FSM	ENSG00000124508.17	ENST00000416795.6	2733	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.0038260731486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	26381947	True	NA	12	True	AATAAA	-17	NA	26383207	26393992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383314_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79167.known	chr6	+	2890	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	7.32343178170074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457206	True	NA	9	True	AATAAA	-18	NA	26457954	26469637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_79168.known	chr6	+	2845	7	FSM	ENSG00000112763.17	ENST00000541522.5	2845	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5459043491057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCTAATGTGTGGCT	NA	False	NA	25	True	AATAAA	-34	NA	26457903	26469653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_79170.known	chr6	+	3113	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	13.5586405916625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457212	True	NA	9	True	AATAAA	-18	NA	26457960	26469637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
transcript_79171.known	chr6	+	1687	8	FSM	ENSG00000112763.17	ENST00000469185.5	1687	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.8406501865378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTTGACTCTTTTTG	26457219	True	NA	9	True	AATAAA	-17	NA	26457967	26476621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26476121
transcript_79175.nnic	chr6	+	1621	3	NNC	ENSG00000182952.5	novel	1943	2	NA	NA	16	-432	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTCTTTTGATGGTTT	26533253	True	NA	29	True	ATTAAA	-15	NA	26538381	26546501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_26538502_26539900_26540027_26545126
transcript_79176.nnic	chr6	+	2451	3	NNC	ENSG00000182952.5	novel	1943	2	NA	NA	-382	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	9.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	NA	False	NA	NA	False	AATAAA	-18	NA	26537983	26546933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_26538502_26539900_26540027_26545126
transcript_79177.known	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	26533237	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26538502_26545126
transcript_79179.known	chr6	+	2943	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	15.5	476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	26589958	True	NA	11	True	ATTAAA	-20	NA	26596952	26600739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26597224_26597913_26598111_26598264
transcript_79180.known	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.0855260988773	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	-26657842	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
transcript_79182.known	chr6	-	467	3	FSM	ENSG00000181315.11	ENST00000465674.5	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGACTGTGAGGGC	-26657831	True	NA	NA	False	NA	NA	NA	26659735	26638626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26638729_26643658_26643729_26659440
transcript_79183.nnic	chr6	-	940	4	Antisense	novelGene_ENSG00000261584.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	2.94392028877595	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTATTGCATGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	26687391	26673026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_26673247_26673884_26674072_26683010_26683131_26686978
transcript_79189.known	chr6	+	985	4	FSM	ENSG00000224843.8	ENST00000668297.1	985	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATGCAATAATTGT	27019880	False	NA	NA	False	AATAAA	-36	NA	27019898	27023943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27020055_27020164_27020656_27023253_27023398_27023749
transcript_79192.nnic	chr6	-	951	3	NNC	ENSG00000124635.9	novel	950	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112961	True	NA	-14	True	TATAAA	-15	NA	27132795	27126078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_27126463_27127263_27127402_27132366
transcript_79193.nnic	chr6	-	793	3	NNC	ENSG00000124635.9	novel	408	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112961	True	NA	-14	True	TATAAA	-15	NA	27132795	27126078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_27126463_27127263_27127402_27132524
transcript_79194.known	chr6	-	408	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112714	False	NA	-14	True	TATAAA	-15	NA	27132548	27126078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27126463_27132524
transcript_79195.known	chr6	-	950	2	FSM	ENSG00000124635.9	ENST00000607124.1	950	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTTGCCAACTGGAA	-27112916	True	NA	-12	True	AATAAA	-24	NA	27132750	27125896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27126463_27132366
transcript_79197.nnic	chr6	-	839	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	-3	8068	multi-exon	FALSE	canonical	3	121	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	-27117235	True	NA	-26	True	AATAAA	-21	NA	27146858	27138292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr6_-_27138682_27146408
transcript_79198.known	chr6	+	457	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACACTGTCTTAGAGAA	27089800	True	NA	NA	False	AAAACA	-20	NA	27147105	27147562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27147100_27147600
transcript_79200.nic	chr6	+	2045	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3485	167	-8	0	3prime_fragment	FALSE	canonical	3	33	junction_1	26.7850704684531	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	27250541	True	NA	19	True	AATAAA	-16	NA	27251185	27256453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79201.known	chr6	+	955	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	20.5836707124847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCTTTTTCTGGACT	27250549	True	NA	NA	False	GGGGCT	-7	NA	27251193	27255662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79204.known	chr6	+	910	5	FSM	ENSG00000112812.16	ENST00000481125.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	28.8303225788405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGGATGATTATTCT	27250557	True	NA	-9	True	NA	NA	NA	27251201	27255514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254985_27255132_27255246
transcript_79206.known	chr6	+	962	5	FSM	ENSG00000112812.16	ENST00000468138.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4403241579972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCCTTTCCACTCCCTG	27251346	True	NA	NA	False	NA	NA	NA	27251619	27255319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79208.known	chr6	+	1002	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	31.3723161756065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTGCTCTGCCATG	27250568	True	NA	NA	False	NA	NA	NA	27251212	27255908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
transcript_79210.nnic	chr6	+	1600	4	NIC	ENSG00000112812.16	novel	955	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	42.2873766297015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	27250553	True	NA	19	True	AATAAA	-16	NA	27251197	27256453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_27251265_27254692_27254873_27254985_27255132_27255246
transcript_79212.nic	chr6	+	2010	4	ISM	ENSG00000112812.16	ENST00000481125.5	910	5	324	-939	-62	0	3prime_fragment	FALSE	canonical	3	22	junction_2	31.5911379978626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	27251493	True	NA	19	True	AATAAA	-16	NA	27251525	27256453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_27252041_27252807_27252950_27254985_27255132_27255246
transcript_79213.known	chr6	+	914	3	FSM	ENSG00000112812.16	ENST00000495683.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCTGTCTATTTCTC	NA	False	NA	NA	False	NA	NA	NA	27251070	27255820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27251265_27254985_27255132_27255246
transcript_79215.known	chr6	+	1809	3	FSM	ENSG00000112812.16	ENST00000377456.6	1809	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	46	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	27251314	True	NA	22	True	AATAAA	-19	NA	27251587	27256456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27252041_27254985_27255132_27255246
transcript_79217.nnic	chr6	-	2811	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	-19	1372	-19	8	multi-exon	FALSE	canonical	3	60	junction_4	21.4650879336657	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-27375278	False	NA	-9	True	AATAAA	-14	NA	27375296	27357822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_79218.nnic	chr6	-	2800	5	NNC	ENSG00000204789.5	novel	4164	5	NA	NA	-2	8	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_4	45.0742443086958	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-27375248	False	NA	-9	True	AATAAA	-14	NA	27375266	27357822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370244_27375193
transcript_79223.known	chr6	+	749	4	FSM	ENSG00000124613.9	ENST00000461521.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.675435561221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCCTTTTGAATGCAA	27388649	True	NA	NA	False	NA	NA	NA	27388991	27400769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27389076_27395016_27395096_27399441_27399551_27400292
transcript_79226.known	chr6	+	325	2	FSM	ENSG00000124613.9	ENST00000482767.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTCCATTGTCATT	27388844	False	NA	6	True	CATAAA	-21	NA	27388903	27391132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27389076_27390979
transcript_79227.known	chr6	-	3328	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	8.89044430835715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTGTTTTTAATAT	-27472725	False	NA	-4	True	ATTAAA	-18	NA	27473105	27450746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
transcript_79228.known	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	16.1691063451262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	NA	False	NA	0	True	ATTAAA	-22	NA	27473118	27450742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
transcript_79232.nnic	chr6	+	1258	6	NNC	ENSG00000281706.4	novel	1026	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.01331855134916	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGTGGAATTGTGTGTG	NA	False	NA	NA	False	AATAAA	-27	NA	27694020	27713289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_27694507_27699596_27699668_27702313_27702418_27710123_27710226_27710680_27710890_27713003
transcript_79234.nic	chr6	+	1181	5	FSM	ENSG00000281706.4	ENST00000693645.1	1598	5	0	417	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.26468052730799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGTGGAATTGTGTGTG	27693778	True	NA	NA	False	AATAAA	-27	NA	27694026	27713289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27694507_27702313_27702418_27710123_27710226_27710680_27710890_27713003
transcript_79236.nic	chr6	+	899	5	FSM	ENSG00000281706.4	ENST00000689802.1	1302	5	-14	417	2	0	multi-exon	FALSE	canonical	2	2	junction_1	5.47722557505166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGTGGAATTGTGTGTG	27693780	True	NA	NA	False	AATAAA	-27	NA	27694028	27713289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27694227_27702313_27702418_27710123_27710226_27710680_27710890_27713003
transcript_79241.known	chr6	-	488	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	-2	-35	-2	35	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGGGGCGAGGGGTC	-27807487	False	118428	NA	False	NA	NA	NA	27807931	27807443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27807400_27807900
transcript_79242.known	chr6	+	503	1	FSM	ENSG00000196747.5	ENST00000358739.5	495	1	26	-34	26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTCGTCTTTGCCT	27707015	False	NA	39	True	NA	NA	NA	27808198	27808701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27808200_27808700
transcript_79243.known	chr6	+	1237	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTTTCACCCTAGAA	27659601	False	NA	3	True	AATAAA	-18	NA	27810063	27811300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27810100_27811300
transcript_79244.known	chr6	+	389	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	27824074	False	NA	18	True	AATAAA	-24	NA	27824091	27824480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27824100_27824500
transcript_79245.known	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	-27817602	False	NA	NA	False	NA	NA	NA	27831560	27831173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27831200_27831600
transcript_79246.known	chr6	+	482	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGCGGGAGAGCTG	27749701	True	NA	NA	False	AATACA	-24	NA	27865316	27865798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27865300_27865800
transcript_79247.known	chr6	-	502	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCACCAAAAGGAAGCT	-27787575	True	NA	NA	False	NA	NA	NA	27872346	27871844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27871800_27872300
transcript_79248.known	chr6	-	387	1	FSM	ENSG00000275126.2	ENST00000618305.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTGTGAAAGAGCTG	-27789787	True	NA	NA	False	NA	NA	NA	27873534	27873147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27873100_27873500
transcript_79249.known	chr6	-	512	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACTGAGGATAGCT	-27890814	False	154151	NA	False	NA	NA	NA	27890826	27890314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27890300_27890800
transcript_79250.known	chr6	+	467	1	FSM	ENSG00000274641.2	ENST00000616182.2	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCAGAGAAAGAGCCTG	27847449	True	NA	NA	False	NA	NA	NA	27893424	27893891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27893400_27893900
transcript_79253.nnic	chr6	-	615	3	NNC	ENSG00000269293.4	novel	2163	3	NA	NA	-8	-467	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTGGTGGACTC	-28136823	False	NA	-1	True	AATAAA	-18	NA	28136855	28122264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_28122641_28123083_28123212_28136744
transcript_79254.known	chr6	-	1536	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	447	0	-19	0	multi-exon	FALSE	canonical	3	61	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGTATGATTGTTTTT	-28136834	False	NA	NA	False	AATAAA	-12	NA	28136866	28121797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28123212_28136744
transcript_79255.known	chr6	+	1954	4	FSM	ENSG00000197279.5	ENST00000683778.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	13.6707311029399	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	28080555	False	NA	19	True	AATAAA	-33	NA	28080567	28089563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28080971_28085480_28085892_28086171_28086311_28088562
transcript_79256.known	chr6	-	686	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28081130	28078791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28078973_28080625
transcript_79258.nnic	chr6	+	1367	5	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-52	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	44.3360744766606	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	28123319	True	NA	5	True	ATTAAA	-16	NA	28124556	28130079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28127315_28127355_28129429
transcript_79260.nnic	chr6	+	1386	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-52	-3	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	30.2691628926573	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	28123319	True	NA	5	True	ATTAAA	-16	NA	28124556	28130079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28129371
transcript_79261.known	chr6	+	1279	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	24.1430919496424	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	28123371	True	NA	8	True	ATTAAA	-19	NA	28124608	28130082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
transcript_79263.nnic	chr6	+	1316	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	40.2850951207626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	28123384	True	NA	8	True	ATTAAA	-19	NA	28124621	28130082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129429
transcript_79266.known	chr6	+	1659	4	FSM	ENSG00000137185.13	ENST00000252207.10	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7.87400787401181	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTATCTGTGTTTAA	28224539	True	NA	29	True	AATAAA	-30	NA	28225274	28233487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28232561
transcript_79268.known	chr6	+	1601	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	8.33999733546454	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	28224556	True	NA	24	True	AATAAA	-25	NA	28225291	28233482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
transcript_79269.known	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	28224603	True	NA	43	True	AGTAAA	-37	NA	28225338	28229230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225367_28227011_28227505_28227689
transcript_79271.known	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	4.47213595499958	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-28251784	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
transcript_79272.nnic	chr6	-	2135	5	NNC	ENSG00000187626.9	novel	5346	5	NA	NA	-27	-2929	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	10.770329614269	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGTTGTCTATATTTC	-28251811	True	NA	5	True	AATAAA	-43	NA	28252296	28244625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251866
transcript_79275.nnic	chr6	-	2302	4	NIC	ENSG00000187626.9	novel	5346	5	NA	NA	-27	-2947	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.7756811551038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCTTTGTACCAAAAATT	-28251811	True	NA	-13	True	AATAAA	-25	NA	28252296	28244643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_28245976_28248066_28248150_28249686_28249835_28251557
transcript_79277.known	chr6	+	1662	1	FSM	ENSG00000189134.4	ENST00000343684.4	1662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGCCATTCATTTGC	28259262	True	NA	NA	False	ATTAAA	-29	NA	28259296	28260958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28259300_28261000
transcript_79280.known	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9.70251971855192	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_79282.known	chr6	+	3100	7	FSM	ENSG00000137338.6	ENST00000259883.3	3100	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	14.4501057281791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28281919_28283755_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_79283.nnic	chr6	+	1957	5	NNC	ENSG00000197062.12	novel	2685	4	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	23.2969955144435	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	28267075	False	NA	18	True	AATAAA	-19	NA	28267109	28277530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28267214_28271853_28271935_28272021_28272340_28272669_28272788_28276194
transcript_79285.known	chr6	+	2362	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.94422221866655	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	28267023	False	NA	11	True	AATAAA	-11	NA	28267057	28278201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
transcript_79288.known	chr6	+	1998	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	23.5513623102076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	28266229	True	NA	18	True	AATAAA	-19	NA	28267152	28277530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
transcript_79291.known	chr6	+	2321	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	22.553639765383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTTGTGGAAGATAA	28267318	True	NA	31	True	AATAAA	-31	NA	28267358	28278221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
transcript_79293.known	chr6	+	2729	4	FSM	ENSG00000197062.12	ENST00000619937.4	2729	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	24.3082062046727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGGAAGATAATTT	28267318	True	NA	34	True	AATAAA	-34	NA	28267358	28278224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267454_28271853_28272340_28272669_28272788_28276194
transcript_79294.nnic	chr6	+	2300	7	NNC	ENSG00000189298.14	novel	4799	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	20.0166597280032	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349194	True	NA	7	True	AATAAA	-15	NA	28349937	28366746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28350068_28350271_28350389_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79296.nnic	chr6	+	2096	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	16.5843299533023	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349178	True	NA	7	True	AATAAA	-15	NA	28349921	28366746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28349965_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79299.nnic	chr6	+	2197	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	15.2105226734652	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349180	True	NA	7	True	AATAAA	-15	NA	28349923	28366746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28350068_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79300.known	chr6	+	4687	6	FSM	ENSG00000189298.14	ENST00000252211.7	4687	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	10.9105453575887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGGATTCTTAAATT	28349203	True	NA	7	True	AATAAA	-17	NA	28349946	28369172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28350068_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79303.known	chr6	+	1794	5	FSM	ENSG00000189298.14	ENST00000341464.9	1794	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.6659604392971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349206	True	NA	7	True	AATAAA	-15	NA	28349949	28366746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28350068_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79306.known	chr6	-	3050	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0213499897497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335831	True	NA	3	True	AATAAA	-30	NA	28336134	28324736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
transcript_79307.known	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.87400787401181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335845	True	NA	3	True	AATAAA	-30	NA	28336148	28324736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
transcript_79308.known	chr6	-	1005	3	FSM	ENSG00000235109.8	ENST00000435857.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCCAGCATCTCCG	NA	False	NA	NA	False	NA	NA	NA	28336375	28326294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28336081
transcript_79310.nic	chr6	+	1615	2	ISM	ENSG00000189298.14	ENST00000252211.7	4687	6	-23	8177	-23	-5751	5prime_fragment	FALSE	canonical	3	21	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTGCACCAGTTTCCA	28349180	True	NA	NA	False	AATAAA	-20	NA	28349923	28360995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_28350068_28359524
transcript_79311.known	chr6	-	3909	6	FSM	ENSG00000158691.15	ENST00000396827.3	3909	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.160645142643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTAACTTGCTTATTC	-28398675	True	NA	NA	False	AATAAA	-14	NA	28399731	28379218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28380872_28382190_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_79312.known	chr6	-	7711	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAATATTTTTGTGTT	-28398691	True	NA	-6	True	TATAAA	-14	NA	28399747	28384737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
transcript_79317.nnic	chr6	-	416	2	FSM	ENSG00000287804.2	ENST00000689665.1	413	2	-3	0	-3	0	multi-exon	FALSE	canonical	3	34	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTCTTTCTGGGTG	-28489169	True	NA	2	True	ATTAAA	-18	NA	28489496	28485428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28485712_28489363
transcript_79318.known	chr6	-	987	2	FSM	ENSG00000287804.2	ENST00000666335.1	987	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTATATTGCTTTTAT	-28489128	True	NA	NA	False	TTTAAA	-15	NA	28489455	28476995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28477891_28489363
transcript_79319.known	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	28839006	28837868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28838321_28838749
transcript_79322.known	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_5	28.6847751696019	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	28923985	28903001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
transcript_79324.known	chr6	+	466	2	FSM	ENSG00000204709.4	ENST00000377186.3	466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTAGAGCCGTTGGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	28943876	28944537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28944027_28944221
transcript_79328.known	chr6	-	2082	5	FSM	ENSG00000204644.10	ENST00000376883.2	2082	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.38152730712011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	NA	False	NA	-4	True	AATAAA	-17	NA	29681152	29672482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29676880_29677367_29681061
transcript_79329.known	chr6	-	1599	4	FSM	ENSG00000204644.10	ENST00000488757.6	1599	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	9.80929264637478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	NA	False	NA	-4	True	AATAAA	-17	NA	29681155	29672482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29681061
transcript_7933.known	chr1	+	630	4	FSM	ENSG00000160752.15	ENST00000471117.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1113.60346024367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGAAGAAAGGGTG	155287309	True	NA	-38	True	AAGAAA	-17	NA	155308862	155318473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168
transcript_79330.known	chr6	+	1283	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.91070819942883	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	NA	False	NA	15	True	AATAAA	-27	NA	29723339	29726525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_79339.nnic	chr6	-	680	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	-29748952	True	NA	-2	True	ATTAAA	-17	NA	29749040	29726600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_29727140_29748899
transcript_79342.known	chr6	+	1319	7	FSM	ENSG00000204632.13	ENST00000360323.11	1319	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTCAAATTATTT	NA	False	NA	-92	True	ATTAAA	-20	NA	29827824	29831021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_79349.nnic	chr6	+	1497	7	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-105	593	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.9120717616771	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAGAGTCCACATGTT	NA	False	NA	5	True	AATAAA	-16	NA	29926353	29929825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_29926531_29926659_29927086_29928050_29928329_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_79358.nnic	chr6	+	779	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	734	496	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.6918060129541	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTTCAAATTCTTG	29927110	False	NA	12	True	ATTAAA	-20	NA	29927192	29929728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_29927453_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_79359.nnic	chr6	+	876	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	734	593	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.6918060129541	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAGAGTCCACATGTT	29927110	False	NA	5	True	AATAAA	-16	NA	29927192	29929825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_29927453_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_7936.known	chr1	+	2017	2	FSM	ENSG00000160752.15	ENST00000487002.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	155287360	True	NA	NA	False	NA	NA	NA	155308913	155312979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155310206_155312254
transcript_7937.known	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	41.5535062004522	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322421	True	NA	29	True	AATAAA	-15	NA	155324576	155331114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_79372.known	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	121.297744649861	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	29942301	True	NA	13	True	AATAAA	-16	NA	29942531	29945870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
transcript_7938.known	chr1	+	808	5	FSM	ENSG00000160752.15	ENST00000495308.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	649.245331134541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTAAGTTTTGGGGCTT	155287339	True	NA	7	True	GATAAA	-21	NA	155308892	155318518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168
transcript_79391.known	chr6	+	1766	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.803883314082	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	29942321	False	NA	27	True	AATAAA	-30	NA	29942551	29945884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
transcript_7940.nic	chr1	-	2287	3	ISM	ENSG00000116539.14	ENST00000679133.1	11431	28	9	145435	9	-20939	5prime_fragment	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAGAAAACCTCGG	-155560673	True	NA	NA	False	ATTAAA	-6	NA	155562832	155480735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155482450_155521099_155521619_155562778
transcript_7941.known	chr1	+	909	2	FSM	ENSG00000235919.5	ENST00000452809.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTAGGTTTCTGTGG	155561981	False	NA	8	True	AATAAA	-15	NA	155562072	155563944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155562287_155563249
transcript_79411.known	chr6	+	736	5	FSM	ENSG00000066379.15	ENST00000376782.6	736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.516210707212	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059839	True	NA	38	True	ATTAAA	-28	NA	30061256	30064909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061390_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_79413.known	chr6	+	743	5	FSM	ENSG00000066379.15	ENST00000359374.8	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	108.137354785476	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059841	True	NA	38	True	ATTAAA	-28	NA	30061258	30064909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061399_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_79415.known	chr6	+	754	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	143.49455564585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059845	True	NA	38	True	ATTAAA	-28	NA	30061262	30064909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_79420.known	chr6	+	851	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	13.1993265821489	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	30059847	True	NA	36	True	ATTAAA	-26	NA	30061264	30064907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
transcript_79422.known	chr6	+	571	4	FSM	ENSG00000066379.15	ENST00000463141.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	148.460993754813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059912	True	NA	38	True	ATTAAA	-28	NA	30061329	30064909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061399_30061514_30061670_30062223_30062334_30064672
transcript_79427.nnic	chr6	+	1416	4	NNC	ENSG00000204619.8	novel	1689	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	187.677619573802	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067180	False	NA	15	True	AATAAA	-19	NA	30067193	30070333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_30067480_30068589_30068699_30069103_30069196_30069404
transcript_79431.known	chr6	+	1689	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	168.291413922398	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067191	False	NA	15	True	AATAAA	-19	NA	30067204	30070333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
transcript_79433.known	chr6	+	1621	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	33	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067184	False	NA	15	True	AATAAA	-19	NA	30067197	30070333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30067480_30068589_30068699_30069103
transcript_79439.nic	chr6	-	3420	10	NIC	ENSG00000234127.9	novel	3518	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_9	14.8756159743818	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212022	True	NA	NA	False	AATAAA	-16	NA	30213419	30184454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_7944.known	chr1	+	2438	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	74.0351747522197	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	155610162	True	NA	11	True	NA	NA	NA	155610217	155614933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
transcript_79440.known	chr6	-	3518	10	FSM	ENSG00000234127.9	ENST00000454678.7	3518	10	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_7	35.4769965463625	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212009	True	NA	NA	False	AATAAA	-16	NA	30213406	30184454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199265_30201034_30201139_30204655_30204766_30213304
transcript_79443.nnic	chr6	-	3303	9	NNC	ENSG00000234127.9	novel	3318	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	37.4032084185301	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212030	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201124_30213304
transcript_79444.known	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.8113883008419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-30212022	True	NA	NA	False	NA	NA	NA	30213419	30196535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_79445.known	chr6	-	3318	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	31.3446067928759	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212030	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
transcript_79458.known	chr6	+	1013	5	FSM	ENSG00000204599.15	ENST00000428728.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	31.7529526186149	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACCTTTGCCCCTGCATA	30326504	True	NA	NA	False	NA	NA	NA	30326904	30335977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744
transcript_79460.known	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	484.013106744022	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336911	True	NA	21	True	AATAAA	-22	NA	30345130	30346857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
transcript_79462.known	chr6	+	522	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	454.514301205144	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336949	True	NA	21	True	AATAAA	-22	NA	30345168	30346857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
transcript_79465.known	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	124.340258967078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326866	30286727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_79468.known	chr6	+	450	4	FSM	ENSG00000241370.6	ENST00000489124.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	516.397133996694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336931	True	NA	21	True	AATAAA	-22	NA	30345150	30346857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345399_30346431_30346558_30346712
transcript_79469.known	chr6	+	621	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_1	51.6333225737023	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336935	True	NA	21	True	AATAAA	-22	NA	30345154	30346857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
transcript_79473.known	chr6	-	6734	4	FSM	ENSG00000231074.10	ENST00000668974.1	6734	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	116.378692207809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	NA	False	NA	NA	False	AATACA	-39	NA	30326490	30286805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
transcript_79474.known	chr6	-	7230	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	86.821656284593	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30327086	30286702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
transcript_79476.known	chr6	-	327	2	FSM	ENSG00000231074.10	ENST00000602498.1	327	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTTAAGTCTGAATT	-30325705	False	NA	1	True	AATAAA	-18	NA	30326137	30304074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30304273_30326008
transcript_79478.known	chr6	+	594	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_3	40.5490101262931	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336939	True	NA	21	True	AATAAA	-22	NA	30345158	30346857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
transcript_79479.known	chr6	+	457	4	FSM	ENSG00000241370.6	ENST00000491477.5	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	544.923847890694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTCCATTTTCTTCTG	30336933	True	NA	48	True	NA	NA	NA	30345152	30346884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345490_30345574_30346431_30346558_30346712
transcript_79480.known	chr6	+	2548	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_2	17.3075422983208	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	30485494	True	NA	22	True	AATAAA	-19	NA	30489508	30494194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_7949.known	chr1	+	2422	14	FSM	ENSG00000125459.17	ENST00000245564.8	2422	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	33.9899045227764	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATTCCACACA	155610162	True	NA	29	True	NA	NA	NA	155610217	155614951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_79496.known	chr6	-	6801	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_7	35.2042446726983	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTGGATATGTTTCT	NA	False	NA	NA	False	AATAAA	-32	NA	30556489	30541380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
transcript_79502.known	chr6	+	2005	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.836157786453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556670	True	NA	78	True	AATAAA	-28	NA	30557315	30563723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
transcript_79503.known	chr6	+	1845	4	FSM	ENSG00000204576.12	ENST00000376560.8	1845	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	12.328828005938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557294	30563723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30558149_30558213_30561833_30562125_30562388
transcript_79504.known	chr6	+	1944	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.43650214343336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556668	True	NA	78	True	AATAAA	-28	NA	30557313	30563723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
transcript_79505.nic	chr6	+	931	3	ISM	ENSG00000204576.12	ENST00000498336.5	2005	5	-295	1958	-259	-1958	5prime_fragment	FALSE	canonical	3	12	junction_2	3	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	NA	False	NA	10	True	AATAAA	-15	NA	30557020	30561765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30557451_30558149_30558213_30561327
transcript_79506.known	chr6	+	1797	3	FSM	ENSG00000204576.12	ENST00000376557.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557279	30563723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30561833_30562125_30562388
transcript_79507.nic	chr6	+	609	2	ISM	ENSG00000204576.12	ENST00000481741.5	1944	4	-34	1958	0	-1958	5prime_fragment	FALSE	canonical	3	23	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	NA	False	NA	10	True	AATAAA	-15	NA	30557279	30561765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30557451_30561327
transcript_79508.known	chr6	+	3426	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	92.285101346618	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	3	True	AAAAAG	-20	NA	30571423	30591522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_79510.known	chr6	+	3405	25	FSM	ENSG00000204574.14	ENST00000326195.13	3405	25	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	92.1285334012578	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	30570057	True	NA	3	True	AAAAAG	-20	NA	30571441	30591522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_79522.known	chr6	+	3131	24	FSM	ENSG00000204574.14	ENST00000376545.7	3131	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	161.852321308789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTTTGGAGATTG	NA	False	NA	15	True	AATAAA	-21	NA	30571392	30591313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_79529.nic	chr6	+	278	3	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	33	13400	2	-581	5prime_fragment	FALSE	canonical	3	649	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAGTGCCACAGGGCCC	30570041	True	NA	3	True	NA	NA	NA	30571425	30577913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30571561_30577408_30577456_30577817
transcript_79532.known	chr6	+	1398	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	85.904339561838	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	30609801	True	NA	25	True	AATAAA	-19	NA	30617839	30626392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_79536.nnic	chr6	+	1342	6	NIC	ENSG00000204568.12	novel	1398	7	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	347.610471648942	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	30609790	True	NA	25	True	AATAAA	-19	NA	30617828	30626392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30624882_30624943_30625501
transcript_79539.known	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_16	37.6854601380582	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-30610564	True	NA	-14	True	AATAAA	-15	NA	30617243	30600412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_79542.known	chr6	+	1476	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_10	48.5771865751358	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626844	False	NA	15	True	AATAAA	-23	NA	30626855	30646823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_79544.nic	chr6	+	1851	12	ISM	ENSG00000137343.18	ENST00000376485.8	1476	13	-16	0	-2	0	intron_retention	FALSE	canonical	3	101	junction_10	48.4739002790622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626828	False	NA	15	True	AATAAA	-23	NA	30626839	30646823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066
transcript_79546.known	chr6	+	1195	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	58.1546811714135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626869	True	NA	15	True	AATAAA	-23	NA	30626892	30646823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_79547.nic	chr6	+	1421	12	NIC	ENSG00000137343.18	novel	1476	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	55.9144860663685	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626828	False	NA	13	True	AATAAA	-21	NA	30626839	30646821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_79548.known	chr6	+	2119	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	66.3554820644082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626862	True	NA	NA	False	AAAAAG	-17	NA	30626885	30644679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
transcript_79549.known	chr6	+	1527	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	59.1236839176992	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626896	False	NA	15	True	AATAAA	-23	NA	30626919	30646823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
transcript_79551.known	chr6	+	2646	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	45.7815532423699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626852	True	NA	NA	False	AAAAAG	-17	NA	30626875	30644679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
transcript_79553.known	chr6	+	2061	10	FSM	ENSG00000137343.18	ENST00000319027.9	2061	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	74.6097666793739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626851	True	NA	NA	False	AAAAAG	-17	NA	30626874	30644679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30643528
transcript_79554.known	chr6	+	2611	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	55.578772926361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626830	False	NA	NA	False	AAAAAG	-17	NA	30626841	30644679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
transcript_79557.known	chr6	+	718	8	FSM	ENSG00000137343.18	ENST00000493388.5	718	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_7	36.3845672599507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAAAGCAACCCAAG	30626891	False	NA	NA	False	NA	NA	NA	30626914	30640698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534
transcript_79558.known	chr6	-	3406	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_19	28.1977583046455	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	-30672877	True	NA	-21	True	AATAAA	-44	NA	30673006	30653126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_79561.known	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	25.822470834527	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	30647072	30653210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_79562.known	chr6	+	1337	6	FSM	ENSG00000204564.12	ENST00000488383.5	1337	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	45.6797548154541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	NA	False	NA	26	True	AATAAA	-26	NA	30647054	30653109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30647304_30649557_30649960_30650993_30651101_30651265_30651467_30652647_30652718_30652801
transcript_79564.known	chr6	+	1496	6	FSM	ENSG00000204564.12	ENST00000446773.6	1496	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	30.017328328817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	NA	False	NA	26	True	AATAAA	-26	NA	30647420	30653109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30647847_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_79570.nnic	chr6	-	1112	5	NNC	ENSG00000204560.10	novel	3406	20	NA	NA	-94	-2892	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	82.2465804760295	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAATGACTGCTTTT	NA	False	NA	-1	True	AATAAA	-24	NA	30673100	30668021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30668209_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_79571.known	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8619042659763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686529	False	687	-5	True	AATAAA	-17	NA	30687216	30676388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
transcript_79572.nic	chr6	-	1200	2	ISM	ENSG00000146112.12	ENST00000615892.4	1448	3	5266	0	5266	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30679070	False	NA	-5	True	AATAAA	-17	NA	30679478	30676388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_30677289_30679178
transcript_79573.known	chr6	-	1453	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	31.2018517968975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	NA	False	NA	-8	True	AATAAA	-21	NA	30691002	30688046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
transcript_79574.known	chr6	-	1411	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.40870359029762	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	-30690297	True	NA	-10	True	AATAAA	-19	NA	30690984	30688048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
transcript_79575.known	chr6	-	1228	3	FSM	ENSG00000137404.15	ENST00000376420.9	1228	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690289	True	NA	-8	True	AATAAA	-21	NA	30690976	30688046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30690046_30690244_30690841
transcript_79577.known	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690287	True	NA	-8	True	AATAAA	-21	NA	30690974	30688046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30690841
transcript_79594.known	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_2	550.255900064284	2218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	NA	False	NA	32	True	AATAAA	-16	NA	30720351	30725422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
transcript_79596.known	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	4755.32256178975	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721022	False	NA	36	True	AATAAA	-20	NA	30721573	30725426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
transcript_79602.known	chr6	-	6968	15	FSM	ENSG00000137337.16	ENST00000376406.8	6968	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	74.55983078942	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30713419	True	NA	-1	True	AATAAA	-19	NA	30717281	30699806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30707565_30708358_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
transcript_79603.nnic	chr6	-	1689	14	NNC	ENSG00000137312.15	novel	1866	13	NA	NA	-33	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	209.336822669696	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30742740	False	NA	-15	True	ATTAAA	-14	NA	30742765	30727829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526_30742572_30742705
transcript_79605.nic	chr6	-	1713	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-12	-121	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	206.125012633919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30740315	True	NA	-15	True	ATTAAA	-14	NA	30742512	30727829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742383
transcript_79606.nic	chr6	-	1650	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-8	-121	combination_of_known_junctions	FALSE	canonical	3	84	junction_12	196.581390410068	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30740335	True	NA	-15	True	ATTAAA	-14	NA	30742532	30727829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_79607.known	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_9	87.1066954308846	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-30742662	False	NA	-13	True	AATAAA	-22	NA	30742687	30727708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_79615.nnic	chr6	-	1623	12	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-3	-121	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	212.009043936205	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30742684	False	NA	-15	True	ATTAAA	-14	NA	30742709	30727829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_79619.nic	chr6	-	1483	11	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-8	-121	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	283.178812766775	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30740335	True	NA	-15	True	ATTAAA	-14	NA	30742532	30727829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30742146_30742204_30742466
transcript_79625.nnic	chr6	-	1456	10	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-3	-121	combination_of_known_splicesites	FALSE	canonical	3	35	junction_8	235.347969327689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30742684	False	NA	-15	True	ATTAAA	-14	NA	30742709	30727829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30742146_30742204_30742526
transcript_79632.nic	chr6	-	1180	4	ISM	ENSG00000137312.15	ENST00000484168.1	1101	7	-3	587	-3	-332	5prime_fragment	FALSE	canonical	3	644	junction_3	24.5356882927706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTACATCCCTTCT	-30742684	False	NA	NA	False	NA	NA	NA	30742709	30740840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_30741705_30741791_30741868_30742146_30742204_30742526
transcript_79633.known	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	NA	False	NA	-35	True	AATAAA	-40	NA	30742928	30743592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30743097_30743233
transcript_79635.known	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744547	30743198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30744197_30744308
transcript_79636.known	chr6	-	1350	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744548	30743198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30743200_30744500
transcript_79641.nnic	chr6	-	1089	5	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-110	451	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	60.5268535445219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCAATTTTTTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	30848269	30839074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30839464_30839822_30840020_30840315_30840404_30847036_30847150_30847967
transcript_79650.nnic	chr6	-	1008	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-117	451	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	49.8285950924656	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCAATTTTTTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	30848276	30839074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
transcript_79660.known	chr6	-	799	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	NA	False	NA	NA	False	NA	NA	NA	30848159	30839525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30840020_30847036_30847150_30847967
transcript_79674.nic	chr6	-	477	2	ISM	ENSG00000237923.1	ENST00000442852.1	799	3	-179	7518	-179	-7518	5prime_fragment	FALSE	canonical	3	151	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGAGTGAGTAACTTTT	NA	False	NA	-16	True	AATAAA	-15	NA	30848338	30847043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_30847150_30847967
transcript_79675.known	chr6	+	3588	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	136.195573991962	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	30882330	False	NA	NA	False	NA	NA	NA	30882612	30899840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_79676.nic	chr6	+	3580	30	NIC	ENSG00000137411.19	novel	3575	30	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	120	junction_5	22.5257152561298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30912686	True	NA	11	True	GATAAA	-17	NA	30914237	30926459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30914345_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_79678.known	chr6	+	1712	14	FSM	ENSG00000213780.11	ENST00000259895.9	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	5.47938579031019	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908191	False	NA	35	True	AATAAA	-17	NA	30908206	30914106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_79679.known	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.02003030735275	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908205	False	NA	35	True	AATAAA	-17	NA	30908220	30914106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_79680.nic	chr6	+	1903	13	NIC	ENSG00000213780.11	novel	1712	14	NA	NA	-40	0	intron_retention	FALSE	canonical	3	21	junction_1	5.69844033242625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908151	False	NA	35	True	AATAAA	-17	NA	30908166	30914106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913388_30913810
transcript_79685.known	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	32.4565015774841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30912686	True	NA	11	True	GATAAA	-17	NA	30914237	30926459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_79686.known	chr6	+	3566	30	FSM	ENSG00000137411.19	ENST00000541562.6	3566	30	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.4820741738808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTGGGAATGAGGAGA	30912779	True	NA	-35	True	NA	NA	NA	30914330	30926413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30914470_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_79688.nnic	chr6	-	1131	3	NNC	ENSG00000204538.4	novel	868	2	NA	NA	-731	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCTAGGCTGCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	31139797	31137533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_31138307_31138971_31139073_31139540
transcript_79690.nic	chr6	-	2712	19	NIC	ENSG00000204536.15	novel	2971	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_18	40.9664496875187	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31157253	False	NA	-3	True	AATAAA	-17	NA	31158209	31142438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
transcript_79692.known	chr6	-	2625	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	37.0597572244656	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31157282	False	NA	-3	True	AATAAA	-17	NA	31158238	31142438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_7971.known	chr1	+	1671	13	FSM	ENSG00000132676.16	ENST00000471642.6	1671	13	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_3	182.843493336666	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155687713	True	NA	-12	True	AATAAA	-11	NA	155687966	155738526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155688193_155689094_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_79715.known	chr6	+	3243	4	FSM	ENSG00000137310.12	ENST00000376257.8	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	10.8730042868667	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31158588	31164215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31158723_31158896_31159708_31161446_31162006_31162476
transcript_79719.known	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2698.14680614306	21134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	NA	False	NA	-2	True	AATAAA	-33	NA	31170682	31164336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
transcript_79733.known	chr6	-	1538	8	FSM	ENSG00000204525.18	ENST00000376237.8	1538	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	235.53820262955	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31272048	True	NA	-5	True	AATAAA	-21	NA	31272105	31268748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271332_31271598_31271869_31271998
transcript_79734.known	chr6	-	1536	8	FSM	ENSG00000204525.18	ENST00000376228.10	1542	8	6	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	207.343548100189	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31272029	True	NA	-5	True	AATAAA	-21	NA	31272086	31268748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_79738.known	chr6	-	1554	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	224.569247535756	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31272029	True	NA	-5	True	AATAAA	-21	NA	31272086	31268748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_79757.known	chr6	-	1880	6	FSM	ENSG00000204525.18	ENST00000487245.5	1880	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	228.184486764548	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31271993	False	NA	-5	True	AATAAA	-21	NA	31272050	31268748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072
transcript_79762.known	chr6	-	1536	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	108.88975889328	624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGCATGTTCGCTGTG	-31357094	True	NA	-9	True	AATAAA	-18	NA	31357179	31353874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
transcript_79782.nic	chr6	+	1330	6	NIC	ENSG00000204520.14	novel	2260	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.6304180207249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	NA	False	NA	10	True	NA	NA	NA	31400695	31415315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31400764_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_79786.known	chr6	+	1370	6	FSM	ENSG00000204520.14	ENST00000449934.7	1370	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	10.9068785635488	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	31403498	True	NA	10	True	NA	NA	NA	31403594	31415315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31403703_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_79790.nic	chr6	+	1635	5	NIC	ENSG00000204520.14	novel	1370	6	NA	NA	-47	0	intron_retention	FALSE	canonical	3	54	junction_1	8.16624148553054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGGCTGCAAAATGTT	31403510	False	NA	12	True	AATAAA	-18	NA	31403547	31415259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31403703_31410542_31411360_31411946_31412226_31412324_31412461_31415011
transcript_79792.known	chr6	+	9148	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATGATTAAGACTT	NA	False	NA	NA	False	TATAAA	-22	NA	31463169	31472408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31463280_31463370
transcript_79794.known	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.5935617870109	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	31494443	True	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_79795.known	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	19.1039262980153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	31497707	False	NA	NA	False	AATAGA	-1	NA	31498144	31511124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_7981.known	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	89.3955256151	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686449	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_79815.known	chr6	-	2003	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_10	389.023713930141	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31542370	False	NA	-2	True	ACTAAA	-32	NA	31542448	31530218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_7982.known	chr1	-	2626	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	125.033155602824	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
transcript_7984.known	chr1	-	2723	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	54.7632175826074	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-155686466	True	NA	-11	True	AATAAA	-21	NA	155688774	155659453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_79853.known	chr6	+	1411	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15.1730755689881	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	NA	False	NA	31	True	NA	NA	NA	31546869	31558829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
transcript_79854.known	chr6	+	1401	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	20.8219969156552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	31547015	True	NA	31	True	NA	NA	NA	31547612	31558829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
transcript_79855.known	chr6	+	1451	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	10.7082522694727	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	31547010	True	NA	31	True	NA	NA	NA	31547607	31558829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
transcript_79858.known	chr6	+	700	3	FSM	ENSG00000204498.11	ENST00000473655.1	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGCCCATCACCTTCTC	31547063	True	NA	NA	False	NA	NA	NA	31547660	31557959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31547752_31548162_31548440_31557627
transcript_79859.known	chr6	-	662	3	FSM	ENSG00000213760.11	ENST00000483251.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTTGTTCTTTAAC	NA	False	NA	NA	False	TATAAA	-20	NA	31546848	31545237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31545582_31546108_31546210_31546631
transcript_79860.known	chr6	-	1681	11	FSM	ENSG00000198563.14	ENST00000396172.6	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_10	340.47208402452	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-31505200	True	NA	-9	True	ACTAAA	-25	NA	31542003	31530225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_79861.known	chr6	-	4027	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_9	409.06590371265	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31505214	True	NA	-2	True	ACTAAA	-32	NA	31542017	31530218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_79862.known	chr6	-	1370	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTGCCTCATCATTT	-31546530	True	NA	0	True	AATAAA	-38	NA	31546608	31544443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31545582_31546108_31546210_31546477
transcript_79863.known	chr6	+	1678	4	FSM	ENSG00000232810.4	ENST00000449264.3	1678	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTCCTTCTTGGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	31575564	31578336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31575928_31576533_31576580_31576766_31576815_31577115
transcript_79864.nnic	chr6	+	572	6	NNC	ENSG00000204472.13	novel	524	3	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.9635727314629	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	NA	False	NA	15	True	AATAAA	-16	NA	31615143	31617015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_31615182_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_79865.known	chr6	+	607	6	FSM	ENSG00000204472.13	ENST00000337917.11	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	37.5957444400294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	31615117	True	NA	21	True	AATAAA	-22	NA	31615226	31617021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31615294_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_79866.nnic	chr6	+	497	3	NIC	ENSG00000204472.13	novel	655	6	NA	NA	323	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	31615493	False	NA	15	True	AATAAA	-16	NA	31615602	31617015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31615737_31616343_31616507_31616815
transcript_79867.known	chr6	+	524	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	11.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	31615889	False	NA	21	True	AATAAA	-22	NA	31615990	31617021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31616146_31616343_31616507_31616815
transcript_79871.nic	chr6	-	3761	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_14	93.355355497154	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31651408	False	NA	-13	True	AATAAA	-31	NA	31652402	31639027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_79876.known	chr6	-	3644	25	FSM	ENSG00000204463.14	ENST00000375976.8	3644	25	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_24	76.668614105701	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31651399	False	NA	-13	True	AATAAA	-31	NA	31652393	31639027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_79877.known	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_24	77.9641566504905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_79881.nic	chr6	-	3506	24	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_23	82.6729041084442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31651408	False	NA	-13	True	AATAAA	-31	NA	31652402	31639027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_79882.known	chr6	-	3626	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_23	83.8609660432605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	NA	False	NA	-14	True	AATAAA	-30	NA	31652700	31639028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_79889.known	chr6	+	709	6	FSM	ENSG00000204444.11	ENST00000375920.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.84465567848098	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31652131	True	NA	9	True	AATAAA	-20	NA	31652416	31658210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_7989.known	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	117.110584017367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686390	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
transcript_79890.known	chr6	+	922	5	FSM	ENSG00000204444.11	ENST00000375918.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.17960354715414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGACCTGTAACTTCAT	31652130	True	NA	NA	False	NA	NA	NA	31652415	31658082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624
transcript_79892.known	chr6	-	2481	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTTTAGGTGGTAGA	-31660566	False	NA	31	True	NA	NA	NA	31660778	31658297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31658300_31660800
transcript_79896.known	chr6	+	1061	7	FSM	ENSG00000204435.15	ENST00000375885.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	431.474893050955	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	NA	False	NA	17	True	AATAAA	-20	NA	31665235	31670070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31665494_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_79897.known	chr6	+	929	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	0	0	0	0	multi-exon	FALSE	canonical	3	1079	junction_6	55.5930151487877	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	31648064	True	NA	14	True	AATAAA	-17	NA	31666079	31670067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_79898.known	chr6	+	908	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	432.954353508799	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666183	True	NA	17	True	AATAAA	-20	NA	31666291	31670070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_79899.known	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	435.543593940058	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666246	False	NA	17	True	AATAAA	-20	NA	31666354	31670070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_7990.known	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	106.641779504107	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_79903.known	chr6	+	1792	5	FSM	ENSG00000204435.15	ENST00000468255.5	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	1079	junction_4	36.5068486725436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCAGCTCCATCTTTT	31648065	True	NA	NA	False	GGGGCT	-2	NA	31666080	31670343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31669509_31669835
transcript_79908.nnic	chr6	-	1716	4	NNC	ENSG00000204438.11	novel	1800	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.5455437028192	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665650	False	NA	-4	True	AATAAA	-28	NA	31665862	31662075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_31662711_31663852_31664578_31664840_31664908_31665573
transcript_79911.known	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	72.9566081082904	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
transcript_79912.known	chr6	-	2793	4	FSM	ENSG00000204438.11	ENST00000375906.5	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	81.6183530558878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTACACTTTTCTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	31666283	31661228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665860
transcript_79918.known	chr6	-	1814	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	70.9804354890995	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665649	False	NA	-4	True	AATAAA	-28	NA	31665861	31662075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
transcript_79921.known	chr6	-	2365	3	FSM	ENSG00000204438.11	ENST00000375896.9	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	64	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTACACTTTTCTTTC	-31664785	False	NA	NA	False	TTTAAA	-18	NA	31664997	31661227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664578_31664840
transcript_79925.known	chr6	-	836	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTAAACTGTTTGGT	NA	False	NA	-17	True	AATAAA	-2	NA	31681476	31676699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31677121_31679100_31679269_31681229
transcript_79928.known	chr6	-	2260	20	FSM	ENSG00000204427.12	ENST00000492084.5	2260	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	54.8118918694174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-31702937	False	NA	-3	True	AATAAA	-18	NA	31703073	31686958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31702611
transcript_79929.known	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_17	19.2136262819658	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	NA	False	NA	1	True	AATAAA	-22	NA	31703324	31686954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_79932.nic	chr6	-	1867	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_17	51.1398787369684	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	NA	False	NA	-3	True	AATAAA	-18	NA	31703342	31686958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_79937.known	chr6	+	402	3	FSM	ENSG00000244355.8	ENST00000375825.8	525	3	8	115	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	31715340	False	NA	NA	False	NA	NA	NA	31715355	31717804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31715411_31715501_31715625_31717580
transcript_79946.known	chr6	-	1261	7	FSM	ENSG00000213722.10	ENST00000436437.2	1261	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	190.788422662965	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31728559	False	103	-6	True	AATAAA	-20	NA	31729501	31727037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729361
transcript_79947.known	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	188.589206713663	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31728854	False	126	-6	True	AATAAA	-20	NA	31729796	31727037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
transcript_79948.known	chr6	-	1688	7	FSM	ENSG00000213722.10	ENST00000375792.7	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_6	70.2790074552059	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729675	False	NA	-6	True	AATAAA	-20	NA	31730617	31727037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31730050
transcript_79953.known	chr6	-	1098	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	1033.79188750283	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGATTTAAAGTGTGG	-31735603	True	NA	-7	True	AATAAA	-31	NA	31736545	31730582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
transcript_79955.known	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	1062.05765955631	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735630	True	NA	-5	True	AATAAA	-33	NA	31736572	31730580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
transcript_79959.known	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	196.199286441108	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729285	False	NA	-6	True	AATAAA	-20	NA	31730227	31727037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
transcript_79964.known	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2642	junction_5	198.062010491664	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735625	True	NA	-5	True	AATAAA	-33	NA	31736567	31730580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
transcript_79968.known	chr6	-	898	5	FSM	ENSG00000213722.10	ENST00000483792.1	898	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	252.731576974465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729320	False	NA	-6	True	AATAAA	-20	NA	31730262	31727037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728645_31728746_31730050
transcript_79975.known	chr6	+	574	2	FSM	ENSG00000228727.9	ENST00000494299.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCACCCAGGATTCAAAG	NA	False	NA	NA	False	NA	NA	NA	31763619	31764299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31764160_31764265
transcript_79976.known	chr6	-	1193	6	FSM	ENSG00000213722.10	ENST00000375789.7	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_4	37.5691362690174	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	-31728357	False	NA	-8	True	AATAAA	-18	NA	31729299	31727039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864
transcript_79980.known	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	394.13853846078	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805741	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
transcript_79982.known	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_4	17.1810215063017	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	31806966	31797395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
transcript_79983.known	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	413.730185829686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805899	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
transcript_79986.known	chr6	-	713	4	FSM	ENSG00000204392.11	ENST00000470086.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	407.436157234753	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805934	True	NA	-6	True	AATAAA	-15	NA	31806852	31797395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31806074_31806143_31806754
transcript_79988.known	chr6	-	767	3	FSM	ENSG00000204392.11	ENST00000477182.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	31806966	31797395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31806074_31806143_31806754
transcript_79989.known	chr6	-	767	5	FSM	ENSG00000204392.11	ENST00000493387.5	767	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	394.13853846078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805742	False	NA	-6	True	AATAAA	-15	NA	31806660	31797395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806122_31806518
transcript_79990.known	chr6	-	2762	2	FSM	ENSG00000204390.10	ENST00000375654.5	2762	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTTCATGAACTCA	NA	False	NA	0	True	ATTAAA	-18	NA	31815283	31809618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31811986_31814888
transcript_79992.known	chr6	+	2400	1	FSM	ENSG00000204389.10	ENST00000375651.7	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTTTTATTCCTTT	NA	False	NA	14	True	AATAAA	-14	NA	31815542	31817942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31815500_31817900
transcript_79994.known	chr6	+	962	5	FSM	ENSG00000204387.14	ENST00000375642.6	962	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	276.508589378341	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	31834023	True	NA	95	True	AATAAA	-16	NA	31834917	31839761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31835410_31835452_31836298_31836518_31837235_31837436_31839542
transcript_79996.known	chr6	+	847	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	246.041028082716	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_79999.nic	chr6	+	699	5	NIC	ENSG00000204387.14	novel	847	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	278.018322237942	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	31834018	True	NA	95	True	AATAAA	-16	NA	31834912	31839761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31835058_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_8.known	ERCC-00028	+	1120	1	FSM	ERCC-00028A	DQ459419	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00028_+_0_1100
transcript_80001.known	chr6	+	602	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	298.056295950204	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834626	31839761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
transcript_80003.known	chr6	+	748	4	FSM	ENSG00000204387.14	ENST00000614363.4	748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	299.246089735893	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTTTGGTCTCAGAACA	31834027	True	NA	100	True	AATAAA	-21	NA	31834921	31839766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31835410_31835456_31837235_31837436_31839542
transcript_80005.known	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	289.443527403111	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
transcript_80007.known	chr6	+	2517	1	FSM	ENSG00000204388.7	ENST00000375650.5	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTTAATATGTG	NA	False	NA	12	True	AATAAA	-13	NA	31827737	31830254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31827700_31830300
transcript_80008.known	chr6	+	712	3	FSM	ENSG00000204387.14	ENST00000648677.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	366	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31837235_31837436_31839542
transcript_80009.known	chr6	+	586	3	FSM	ENSG00000204387.14	ENST00000375633.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	218.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGGTTTGGTCTCAGAA	31835238	False	NA	98	True	AATAAA	-19	NA	31835287	31839764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835452_31837235_31837436_31839542
transcript_80010.known	chr6	-	1875	6	FSM	ENSG00000204386.12	ENST00000491768.5	1875	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	116.376286244234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	-31862794	False	NA	-5	True	NA	NA	NA	31862822	31859051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31859946_31860041_31860179_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_80016.known	chr6	-	3353	6	FSM	ENSG00000204386.12	ENST00000375631.5	3353	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	15.7936696179197	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	-31862793	False	NA	NA	False	NA	NA	NA	31862821	31857658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31859946_31860041_31860265_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_80021.known	chr6	-	1973	5	FSM	ENSG00000204386.12	ENST00000677512.1	1973	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	135.984144296311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCATGACTGACTATCAA	-31862856	False	NA	-95	True	NA	NA	NA	31862884	31859270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31859946_31860046_31860622_31861187_31861451_31861998_31862192_31862617
transcript_80024.known	chr6	-	3036	10	FSM	ENSG00000204371.11	ENST00000494816.5	3036	10	0	0	0	0	multi-exon	TRUE	canonical	3	704	junction_9	134.531285085168	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31886399	False	NA	NA	False	AATAAA	-20	NA	31886437	31879758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911
transcript_80026.known	chr6	-	1454	4	FSM	ENSG00000204371.11	ENST00000465429.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_3	112.529502304457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGAT	-31892680	True	NA	NA	False	NA	NA	NA	31897687	31895400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31896517_31896605_31896825_31896922_31896990_31897635
transcript_80027.known	chr6	-	3965	28	FSM	ENSG00000204371.11	ENST00000375537.8	3965	28	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_19	138.760009340025	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31892677	True	NA	NA	False	AATAAA	-20	NA	31897684	31879758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_80028.known	chr6	-	2585	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.04795013082563	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	-31878936	False	NA	-19	True	ATTAAA	-23	NA	31878997	31863191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_8003.known	chr1	+	1470	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	137.296686650805	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678082	True	NA	-12	True	AATAAA	-11	NA	155689090	155738526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_80034.nic	chr6	-	1294	11	NIC	ENSG00000204356.14	novel	1445	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_5	219.661671668045	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-31950525	True	NA	-27	True	AGTAAA	-20	NA	31958976	31952227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954878_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_80036.known	chr6	-	1445	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	0	0	0	multi-exon	TRUE	canonical	3	566	junction_10	98.0909781784237	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTCGCAGCTGTTTT	-31950520	True	NA	-2	True	NA	NA	NA	31958971	31952086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_8004.known	chr1	+	2056	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	41.1082581592664	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	155678082	True	NA	NA	False	AATAAA	-32	NA	155689090	155739010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_80045.known	chr6	-	1543	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	97.2945128063357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-31950511	True	NA	-27	True	AGTAAA	-20	NA	31958962	31952227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_80046.known	chr6	-	1786	9	FSM	ENSG00000204356.14	ENST00000492185.5	1786	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_8	99.5677376211793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCCTCAGCCTCTGG	NA	False	NA	-26	True	AGTAAA	-21	NA	31959038	31952226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_80047.known	chr6	-	1405	11	FSM	ENSG00000204356.14	ENST00000375425.9	1405	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	242.408663211528	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCTCCCTCAGCCTCT	-31950401	False	NA	-28	True	AGTAAA	-19	NA	31958852	31952228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958670
transcript_80048.known	chr6	+	3795	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	21.354220741676	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	31956291	True	NA	7	True	GATAAA	-9	NA	31959174	31969751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
transcript_8005.known	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	125.78958952685	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678074	True	NA	-12	True	AATAAA	-11	NA	155689082	155738526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_80051.known	chr6	+	1889	8	FSM	ENSG00000204344.16	ENST00000466132.5	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.8703675364699	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31971075	False	NA	NA	False	AATAAA	-17	NA	31971090	31981446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31971275_31971868_31972512_31972620_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_80053.known	chr6	+	1405	7	FSM	ENSG00000204344.16	ENST00000492583.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	30.9408036956594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGGCTCTCGTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	31971898	31981164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_80059.known	chr6	-	1667	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	39.4067112163511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCGCTGTCTTCTTAG	NA	False	NA	-3	True	AATAAA	-18	NA	31972290	31969812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
transcript_80061.known	chr6	+	1039	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	33.2686038180144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	31972014	True	NA	NA	False	NA	NA	NA	31972380	31981429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_80062.known	chr6	+	1128	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	9.17823512446701	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972188	False	NA	NA	False	AATAAA	-17	NA	31972554	31981446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_8007.nic	chr1	-	821	4	ISM	ENSG00000116580.20	ENST00000471341.5	5097	20	3	57663	0	0	5prime_fragment	FALSE	canonical	3	53	junction_3	8.52447456836295	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-155853252	True	NA	NA	False	AAGAAA	-10	NA	155857214	155822446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155857146
transcript_80071.known	chr6	-	1469	7	FSM	ENSG00000204348.10	ENST00000337523.10	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	26.2805377925694	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	31972138	31969814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971682_31971928
transcript_80072.known	chr6	-	2025	3	FSM	ENSG00000204348.10	ENST00000473976.1	2025	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	31972095	31969814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31971148_31971319
transcript_80073.known	chr6	-	1533	6	FSM	ENSG00000204348.10	ENST00000375356.7	1533	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	28.7847181678056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGCAGATAATAAAAGCATA	-31971902	True	NA	-34	True	NA	NA	NA	31971984	31969843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319
transcript_80074.known	chr6	-	2626	18	FSM	ENSG00000213676.13	ENST00000375203.8	2626	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	8.08689828521619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTGCCTTCCTGGCT	-32127983	False	NA	-1	True	AATAAA	-24	NA	32128246	32115263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_80076.known	chr6	-	2532	18	FSM	ENSG00000213676.13	ENST00000453203.2	2532	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	18.3070693702552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGGGTGGGGGGGAGT	-32126894	True	NA	-89	True	NA	NA	NA	32128217	32115351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117131_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_80077.known	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18754509363078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	-32126899	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_8008.nic	chr1	-	870	4	ISM	ENSG00000116580.20	ENST00000361040.9	5118	21	-71	58020	20	0	5prime_fragment	FALSE	canonical	3	25	junction_3	21.6999743983464	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-155857106	False	NA	NA	False	AAGAAA	-10	NA	155857275	155822446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155857158
transcript_80080.nic	chr6	-	1305	7	NIC	ENSG00000213676.13	novel	1176	8	NA	NA	-25	-13	intron_retention	FALSE	canonical	3	69	junction_1	5.67646212197547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAACCAAAAA	-32128015	False	NA	NA	False	NA	NA	NA	32128278	32120454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_80081.known	chr6	-	1342	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	NA	False	NA	-12	True	ATTAAA	-20	NA	32130288	32128706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32129855_32130094
transcript_80087.known	chr6	+	1906	9	FSM	ENSG00000221988.13	ENST00000324816.11	1906	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	30.4127851404635	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	32153944	False	NA	15	True	AATAAA	-15	NA	32154140	32163675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80088.known	chr6	+	1945	9	FSM	ENSG00000221988.13	ENST00000375137.6	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	38.7183338355358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153898	False	NA	18	True	AATAAA	-18	NA	32154094	32163678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32154395_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_8009.nnic	chr1	-	835	4	NNC	ENSG00000116580.20	novel	471	4	NA	NA	0	-5968	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.0410262117139	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTATGTGTTTTTGT	-155853252	True	NA	-5	True	AATAAA	-19	NA	155857214	155832837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_155832951_155834281_155834405_155853275_155853807_155857146
transcript_80091.known	chr6	+	1754	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	41.2293508922952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153941	False	NA	18	True	AATAAA	-18	NA	32154137	32163678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80102.known	chr6	-	2196	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	0	0	0	multi-exon	TRUE	canonical	3	237	junction_6	40.3680979652663	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32175948	False	NA	-30	True	AATAAA	-13	NA	32176084	32168211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
transcript_80103.known	chr6	-	2496	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	111.211010645929	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177061	False	NA	-30	True	AATAAA	-13	NA	32177080	32168211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
transcript_80104.known	chr6	-	2017	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	111.952370824978	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177306	False	NA	-30	True	AATAAA	-13	NA	32177325	32168211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
transcript_80105.known	chr6	-	2021	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	124.93387139692	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177960	True	NA	-30	True	AATAAA	-13	NA	32178096	32168211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
transcript_80109.known	chr6	-	2782	3	FSM	ENSG00000204314.12	ENST00000495191.5	2782	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCCGCAATTCCAAAGAC	-32151903	False	NA	-8	True	ATTAAA	-18	NA	32151923	32148358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32149399_32149536_32149723_32150367
transcript_8011.nic	chr1	-	712	3	NIC	ENSG00000116580.20	novel	471	4	NA	NA	0	-5968	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	21	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTATGTGTTTTTGT	-155853252	True	NA	-5	True	AATAAA	-19	NA	155857214	155832837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_155832951_155853275_155853807_155857146
transcript_80110.known	chr6	-	567	3	FSM	ENSG00000284954.1	ENST00000485392.5	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32154313	False	NA	-4	True	AATAAA	-19	NA	32154333	32152801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32153173_32153736_32153837_32154237
transcript_80111.known	chr6	+	1759	9	FSM	ENSG00000221988.13	ENST00000361568.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	38.7183338355358	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153326	True	NA	18	True	AATAAA	-18	NA	32153522	32163678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32153637_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80112.known	chr6	-	543	2	FSM	ENSG00000284954.1	ENST00000497552.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32153888	False	NA	-4	True	AATAAA	-19	NA	32153908	32152801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32153173_32153736
transcript_80114.known	chr6	+	1117	6	FSM	ENSG00000204308.8	ENST00000375094.4	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	1789	junction_1	196.574057291393	1755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGGATCTCTTCCCAA	NA	False	NA	13	True	AATAAA	-15	NA	32178404	32180793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32180228
transcript_80127.known	chr6	-	3229	9	FSM	ENSG00000204304.12	ENST00000375050.6	3229	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	11.7785557264038	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-32190178	False	NA	-4	True	AATAAA	-22	NA	32190202	32184732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
transcript_80128.nnic	chr6	-	1904	8	NNC	ENSG00000204304.12	novel	3229	9	NA	NA	-4	586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	27.1894337219893	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTGTTGTTGT	-32190182	False	NA	-7	True	AAAAAG	-16	NA	32190206	32185669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188394_32189901
transcript_8013.nnic	chr1	-	1308	3	NNC	ENSG00000116580.20	novel	7745	32	NA	NA	0	-23306	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	25	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGACAAATACTTTTTAT	-155853252	True	NA	NA	False	AATAAA	-40	NA	155857214	155850175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_155850885_155853275_155853807_155857146
transcript_80130.known	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	3.39934634239519	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192619	False	NA	0	True	AATAAA	-18	NA	32192643	32190765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
transcript_80132.known	chr6	-	1460	4	FSM	ENSG00000213654.10	ENST00000487761.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.6147209217982	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192844	False	NA	0	True	AATAAA	-18	NA	32192868	32190765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32191504_32191708_32191909_32192147_32192273_32192471
transcript_80135.nnic	chr6	+	1472	3	NNC	ENSG00000225914.4	novel	1216	4	NA	NA	168	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGATACATAATTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	32254808	32391949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32255415_32390213_32390754_32391623
transcript_80137.known	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.06155281280883	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	NA	False	NA	25	True	AATAAA	-25	NA	32439886	32445046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
transcript_80138.known	chr6	-	1229	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.59090282131363	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	NA	False	NA	-27	True	ATTAAA	-24	NA	32589848	32578768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
transcript_80139.known	chr6	-	1642	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-37	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	4.60298815988049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	NA	False	NA	-2	True	AATAAA	-22	NA	32666694	32659466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
transcript_80140.known	chr6	-	1501	4	FSM	ENSG00000179344.17	ENST00000399079.7	1501	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	NA	False	NA	-2	True	AATAAA	-22	NA	32666664	32659466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32660250_32661966_32662249_32664797_32665068_32666498
transcript_80141.known	chr6	+	1458	5	FSM	ENSG00000237541.4	ENST00000374940.4	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTACTAATTTCAATAT	NA	False	NA	NA	False	AATACA	-15	NA	32741390	32747198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32741526_32745158_32745408_32745790_32746073_32746239_32746415_32746581
transcript_80143.known	chr6	-	2685	11	FSM	ENSG00000168394.12	ENST00000354258.5	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	13.2453765518388	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCTTATGTTTCC	NA	False	NA	-9	True	AATAAA	-15	NA	32853704	32845208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32853038
transcript_80144.known	chr6	+	1017	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.17612260356422	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGATGGGACTCTTT	32854119	False	NA	NA	False	NA	NA	NA	32854191	32859851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
transcript_80146.known	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	34.9937137211814	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-32843766	False	NA	NA	False	AATAAA	-19	NA	32844047	32840716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
transcript_80148.known	chr6	+	1623	3	FSM	ENSG00000204261.9	ENST00000458296.2	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGAGGATGGTCTTTT	NA	False	NA	-3	True	AATAAA	-4	NA	32844107	32846484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32844275_32844569_32844871_32845329
transcript_80149.known	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	33.8502584923661	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	32844679	32840716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
transcript_80150.nnic	chr6	+	1072	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-30	5	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGTGAACCCTAATGT	NA	False	NA	18	True	AATAAA	-24	NA	32894729	32901793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80151.nnic	chr6	+	1685	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-404	244	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGATTGCCTTTTTAT	NA	False	NA	NA	False	TATAAA	-29	NA	32894355	32902032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80152.nnic	chr6	+	1813	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-404	372	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTACCTTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	32894355	32902160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80153.nnic	chr6	+	3590	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-584	1969	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCTTTTTCTTCCTCTT	NA	False	NA	4	True	AATAAA	-15	NA	32894175	32903757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80154.nnic	chr6	+	1577	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-446	5	-446	-5	multi-exon	FALSE	canonical	3	86	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTGCACAAAGAGTGA	NA	False	NA	8	True	AATAAA	-14	NA	32894313	32901783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_80155.nnic	chr6	+	1389	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-9	-244	-9	244	multi-exon	FALSE	canonical	3	86	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGATTGCCTTTTTAT	NA	False	NA	NA	False	TATAAA	-29	NA	32894750	32902032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_80156.nnic	chr6	+	1538	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-30	-372	-30	372	multi-exon	FALSE	canonical	3	86	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTACCTTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	32894729	32902160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_80157.nnic	chr6	+	3157	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-344	-1677	-344	1677	multi-exon	FALSE	canonical	3	86	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTGTGATATTCTGTT	NA	False	NA	6	True	AATAAA	-17	NA	32894415	32903465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_80159.known	chr6	+	2338	9	FSM	ENSG00000204256.14	ENST00000607833.5	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	38.5176501749523	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	32972162	False	NA	34	True	NA	NA	NA	32972216	32978203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_80160.known	chr6	-	1348	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.28035085019828	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTTTCCATGTCTTC	NA	False	NA	-7	True	AATAAA	-13	NA	32941028	32934635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
transcript_80165.known	chr6	-	1007	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	26.0240273593462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
transcript_80168.known	chr6	-	1093	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.09815545882523	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	NA	False	NA	-5	True	AATAAA	-14	NA	32953097	32948617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
transcript_80169.nic	chr6	-	1069	5	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	29.7699512932084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32969104	True	NA	-5	True	AATAAA	-14	NA	32969126	32948617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32969001
transcript_80172.known	chr6	-	1735	4	FSM	ENSG00000204257.15	ENST00000477541.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	31.2018517968975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949273_32949400_32949610_32950804_32952948
transcript_80173.known	chr6	-	777	4	FSM	ENSG00000204257.15	ENST00000395305.7	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	33.9050963065371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	-32953047	True	NA	0	True	AATAAA	-19	NA	32953061	32948612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32952948
transcript_80174.known	chr6	-	3464	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.98212002188447	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGCTTTTTTTTTAC	-33009430	True	NA	NA	False	ATTAAA	-21	NA	33009591	33004181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_80176.nic	chr6	+	1119	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-58	-432	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	26.3696795581592	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	NA	False	NA	15	True	NA	NA	NA	33080327	33086769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_80177.nic	chr6	+	1230	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-58	-321	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	26.3696795581592	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAGGAAAGAAGAGAACCA	NA	False	NA	9	True	AATAAA	-21	NA	33080327	33086880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_80180.nic	chr6	+	998	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-11	-432	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	45.2972405340546	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	33079925	True	NA	15	True	NA	NA	NA	33080431	33086769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33080535_33080688_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_80181.known	chr6	-	1704	6	FSM	ENSG00000231389.8	ENST00000419277.5	1704	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	11.3595774569303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGCAATTTTTACCAG	-33080631	True	NA	NA	False	AATAAA	-19	NA	33080710	33064568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073670_33080679
transcript_80182.nic	chr6	-	1452	6	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-87	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	12.0233106921513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGAGACTCTGAGTCAT	NA	False	NA	-7	True	AATAAA	-18	NA	33080862	33065013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073711_33080679
transcript_80183.nic	chr6	-	1593	6	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-166	-7	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	11.034491379307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGAGACTCTGAGTCAT	NA	False	NA	-7	True	AATAAA	-18	NA	33080941	33065013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073773_33080679
transcript_80184.nic	chr6	-	1333	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-208	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	10.3047319227625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGAGACTCTGAGTCAT	NA	False	NA	-7	True	AATAAA	-18	NA	33080983	33065013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
transcript_80189.nnic	chr6	+	809	3	NIC	ENSG00000224557.8	novel	727	3	NA	NA	5	5	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	45	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	NA	False	NA	22	True	TATAAA	-23	NA	33116683	33118786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33116833_33116956_33117221_33118390
transcript_8019.known	chr1	+	5182	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5182444579612	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGTCAGCCTGATTC	155858407	True	NA	11	True	AATAAA	-24	NA	155859566	155885199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
transcript_80191.nnic	chr6	+	1180	3	NIC	ENSG00000224557.8	novel	1085	3	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	45	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33116675	33119149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33116833_33116956_33117221_33118390
transcript_80193.nnic	chr6	+	760	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-37	362	-14	5	multi-exon	FALSE	canonical	3	26	junction_1	39	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	NA	False	NA	22	True	TATAAA	-23	NA	33116641	33118786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_80194.nnic	chr6	+	1123	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-37	-1	-14	0	multi-exon	FALSE	canonical	3	26	junction_1	39	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33116641	33119149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_80199.nnic	chr6	+	1102	3	FSM	ENSG00000224557.8	ENST00000686632.1	1092	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	19	junction_1	42.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33116645	33119149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116973_33117221_33118390
transcript_8020.known	chr1	-	2419	7	FSM	ENSG00000143622.11	ENST00000651853.1	2419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	93.3102650063516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGTAGTGGTCCCT	-155908033	True	NA	-90	True	GATAAA	-37	NA	155911404	155898836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155900619_155904310_155904503_155904602_155904606_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_80201.nnic	chr6	+	743	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	-98	82	-10	-82	multi-exon	FALSE	canonical	3	19	junction_1	42.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTAATACTGGTTTG	NA	False	NA	6	True	NA	NA	NA	33116645	33118699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116833_33116973_33117221_33118390
transcript_80204.nnic	chr6	+	1193	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	-98	-368	-10	0	multi-exon	FALSE	canonical	3	19	junction_1	42.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33116645	33119149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116833_33116973_33117221_33118390
transcript_80209.nnic	chr6	-	1171	3	Antisense	novelGene_ENSG00000224557.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_2	4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCACGTGTGTCTGTGT	NA	False	NA	-3	True	ATTAAA	-20	NA	33124580	33117821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_33118580_33119618_33119766_33124314
transcript_80212.nnic	chr6	+	542	2	NNC	ENSG00000224557.8	novel	1213	3	NA	NA	592	-82	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTAATACTGGTTTG	33117320	False	NA	6	True	NA	NA	NA	33117354	33118699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33117588_33118390
transcript_80213.nnic	chr6	+	629	2	NNC	ENSG00000224557.8	novel	1213	3	NA	NA	592	5	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	33117320	False	NA	22	True	TATAAA	-23	NA	33117354	33118786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33117588_33118390
transcript_80215.nnic	chr6	+	994	2	NNC	ENSG00000224557.8	novel	1213	3	NA	NA	592	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAGTAAAATTTTCATG	33117320	False	NA	11	True	AATAAA	-19	NA	33117354	33119151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33117588_33118390
transcript_80225.nnic	chr6	+	2007	4	NNC	ENSG00000224557.8	novel	776	5	NA	NA	0	11520	intron_retention	FALSE	canonical	3	17	junction_3	15.4344492037203	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATGGGATAGTATCTT	NA	False	NA	5	True	AATAAA	-18	NA	33116655	33140604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33117221_33128633_33128745_33131244_33131415_33139443
transcript_8023.known	chr1	-	3390	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	4.73286382647969	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCTTTCCTTTGCTTC	-155907978	True	NA	-1	True	AATACA	-15	NA	155911349	155897807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_80231.nnic	chr6	+	1307	3	NNC	ENSG00000224557.8	novel	776	5	NA	NA	0	2791	intron_retention	FALSE	canonical	3	25	junction_1	14	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTCAAAGAAAAACTTCT	NA	False	NA	NA	False	NA	NA	NA	33116655	33131875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33117221_33128633_33128745_33131244
transcript_80233.known	chr6	-	1194	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	5.24404424085076	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	-33192127	False	NA	NA	False	AATAAA	-19	NA	33192454	33186444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_80234.known	chr6	-	2846	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	22.6459600408735	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	NA	False	NA	-3	True	ATTAAA	-17	NA	33200614	33193587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_80235.known	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	69.8400504944063	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	33194251	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_80236.known	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	19.4543625498813	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	33194292	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_80238.known	chr6	+	977	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	15.1575063912241	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	33204191	True	NA	23	True	AATAAA	-23	NA	33204654	33206831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
transcript_80241.known	chr6	+	1741	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	11.146748404804	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	33203672	True	NA	27	True	NA	NA	NA	33208499	33212716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
transcript_80244.known	chr6	-	2936	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	23.4143692415706	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-33271864	False	NA	-6	True	AATAAA	-18	NA	33271876	33250277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_80246.nic	chr6	-	2717	20	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_19	54.857963158357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-33271935	True	NA	-6	True	AATAAA	-18	NA	33271976	33250277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271904
transcript_80255.known	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	11671.6896737362	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029961	True	NA	6	True	AATAAA	-19	NA	33272074	33276510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80258.known	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_4	2461.27786931911	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33030018	False	NA	6	True	AATAAA	-19	NA	33272131	33276510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80259.known	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3008.26046744626	42771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	33029961	True	NA	7	True	AATAAA	-20	NA	33272074	33276511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80260.known	chr6	+	642	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	2990.1821014781	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029985	True	NA	1	True	AATAAA	-14	NA	33272098	33276505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
transcript_80261.known	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_2	1917	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33273525	True	NA	6	True	AATAAA	-19	NA	33275865	33276510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33276067_33276175_33276268_33276390
transcript_80262.known	chr6	+	639	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3308.74730827242	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029974	True	NA	1	True	AATAAA	-14	NA	33272087	33276505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
transcript_80263.known	chr6	+	685	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	13058.9644008329	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029982	True	NA	6	True	AATAAA	-19	NA	33272095	33276510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80266.known	chr6	-	2070	15	FSM	ENSG00000227057.10	ENST00000374617.9	2070	15	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_13	55.6996775720709	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-33280953	True	NA	-6	True	ATTAAA	-21	NA	33289239	33279107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_8027.nnic	chr1	-	1000	5	NNC	ENSG00000143622.11	novel	2419	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.5920557061226	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-155908041	True	NA	-33	True	NA	NA	NA	155911412	155900182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_155900619_155904310_155904499_155910449_155910507_155910655_155910805_155911242
transcript_80272.nnic	chr6	-	1787	14	NIC	ENSG00000227057.10	novel	2070	15	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	197.871155257254	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-33288560	False	NA	-6	True	ATTAAA	-21	NA	33289270	33279107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_8028.known	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	79.4496696028372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-155908031	True	NA	-33	True	NA	NA	NA	155911402	155900182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
transcript_80280.known	chr6	+	1703	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTGCAGTGTGGTCTT	33277036	False	NA	15	True	AATAAA	-15	NA	33277122	33278825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33277100_33278800
transcript_80297.known	chr6	+	884	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	110.020452644043	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289301	33290933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80298.nnic	chr6	+	536	5	NNC	ENSG00000204220.12	novel	884	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	129.445934659996	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	33285715	True	NA	24	True	AATAAA	-17	NA	33289577	33290933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33289621_33289841_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80299.known	chr6	+	521	5	FSM	ENSG00000204220.12	ENST00000374610.6	521	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.142098503875	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGGAGGGGAGGGAAT	33285734	True	NA	-47	True	GGGGCT	-33	NA	33289596	33290862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289629_33289774_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80308.known	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	130.573946695179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	33285733	True	NA	-34	True	NA	NA	NA	33289595	33290875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
transcript_80310.known	chr6	+	734	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	30.4667396060396	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	33285738	True	NA	24	True	AATAAA	-17	NA	33289600	33290933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80315.known	chr6	+	989	2	FSM	ENSG00000204220.12	ENST00000491382.1	989	2	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGGAGGGAATGAGGCA	33285764	False	NA	-41	True	GGGGCT	-39	NA	33289626	33290868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289921_33290173
transcript_80316.known	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_17	60.3913419858444	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33298232	True	NA	-1	True	AATAAA	-23	NA	33298942	33291653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
transcript_80317.known	chr6	-	3450	8	FSM	ENSG00000231925.13	ENST00000434618.7	3450	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_6	19.8020819354832	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-33308328	False	5750	-17	True	AATAAA	-23	NA	33314078	33299693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_80319.known	chr6	-	1299	7	FSM	ENSG00000231925.13	ENST00000489157.5	1299	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	122.03471728251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTCACTGCCATCCTG	-33308504	False	NA	-112	True	NA	NA	NA	33314254	33301759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313693_33313865_33314004
transcript_80321.known	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_7	141.208775815623	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317209	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_80323.nnic	chr6	-	2202	8	NNC	ENSG00000204209.13	novel	2558	8	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_5	359.295682906297	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317204	True	NA	0	True	AATAAA	-25	NA	33322954	33318557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33321086_33321568_33321718_33321978_33322861
transcript_80331.nic	chr6	-	1479	6	NIC	ENSG00000204209.13	novel	2606	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	98	junction_5	368.158335502539	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317221	True	NA	0	True	AATAAA	-25	NA	33322971	33318557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33322861
transcript_80338.nnic	chr6	+	2459	12	NNC	ENSG00000237649.8	novel	2391	11	NA	NA	-30	-26	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	177.516755116545	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTTTTATTAGCATTT	NA	False	NA	18	True	AATAAA	-25	NA	33391792	33409870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409477_33409542_33409645
transcript_8034.known	chr1	-	2961	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	29.3743437544725	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924800	True	NA	-7	True	AATAAA	-14	NA	155934413	155913044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_80343.known	chr6	+	2391	11	FSM	ENSG00000237649.8	ENST00000428849.7	2391	11	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_5	23.1216348902927	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	NA	False	NA	44	True	AATAAA	-23	NA	33391822	33409896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409645
transcript_80353.known	chr6	+	1752	15	FSM	ENSG00000112511.18	ENST00000495509.6	1752	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	29.0513268515697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCAGTACCTGGTT	33411063	True	NA	NA	False	NA	NA	NA	33411125	33416051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414965_33415145_33415234_33415330_33415589_33415671_33415809
transcript_80362.known	chr6	-	661	6	FSM	ENSG00000112514.18	ENST00000607266.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_5	628.06897710363	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-33417889	False	6262	-18	True	AATAAA	-16	NA	33417931	33416549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417868
transcript_80364.known	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	797.150776202344	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-33411880	True	NA	-18	True	AATAAA	-16	NA	33418142	33416549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
transcript_80365.known	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	761.892538354327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-33411808	True	NA	-87	True	NA	NA	NA	33418070	33416618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
transcript_80373.known	chr6	-	855	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	0	0	0	multi-exon	TRUE	canonical	3	550	junction_5	546.559639929624	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTATTTCTCTTTA	-33411845	True	NA	1	True	NA	NA	NA	33418107	33416441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_80374.known	chr6	-	822	5	FSM	ENSG00000112514.18	ENST00000440279.7	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	1796	junction_3	71.550681338475	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCCTTTTGCCTGT	-33417879	False	6262	-20	True	AATAAA	-14	NA	33417921	33416551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
transcript_80375.nic	chr6	+	2636	3	NIC	ENSG00000213588.6	novel	2715	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	130.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	NA	False	NA	20	True	AATAAA	-20	NA	33454542	33457544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33454776_33455029_33455488_33455599
transcript_80376.known	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	NA	False	NA	20	True	AATAAA	-20	NA	33454575	33457544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33454776_33455029
transcript_80377.known	chr6	-	422	1	FSM	ENSG00000274259.2	ENST00000614205.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTGGATATATACA	NA	False	NA	NA	False	ATTAAA	-32	NA	33454408	33453986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33454000_33454400
transcript_80380.known	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	434	junction_3	48.0183298335125	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-33573201	True	NA	-7	True	AATAAA	-17	NA	33580276	33572551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
transcript_80384.nnic	chr6	-	664	5	NNC	ENSG00000137288.10	novel	1284	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	809.047395088817	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-33700000	True	NA	-10	True	AATAAA	-22	NA	33711727	33697567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_33697751_33700443_33700514_33701345_33701421_33710694_33710852_33711548
transcript_80386.known	chr6	-	1284	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_3	89.8047264284508	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCCGAAATGCAG	-33699973	True	NA	-4	True	AATAAA	-23	NA	33711700	33696763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
transcript_80407.known	chr6	+	1773	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	7979.74966320999	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_8041.known	chr1	-	911	6	FSM	ENSG00000132680.11	ENST00000466713.1	911	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	15.7607106438764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCCCAGCTACTTGGGA	-155924785	True	NA	NA	False	NA	NA	NA	155934398	155926470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_80410.nic	chr6	+	1840	5	NIC	ENSG00000137309.20	novel	1920	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	1569	junction_1	7429.60592831141	1665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	34235979	True	NA	49	True	AATAAA	-20	NA	34236838	34246231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_34236964_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_80418.nnic	chr6	-	753	6	NNC	ENSG00000272325.2	novel	9900	5	NA	NA	226	-8667	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	195.892215261352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAATAATTTGTCCTAT	-34392427	False	NA	39	True	ATTAAA	-23	NA	34392443	34288345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_34288486_34288739_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_80419.known	chr6	-	9900	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	22.0156194552867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTAGTGTCTGGTCT	-34392653	False	NA	-3	True	AATAAA	-20	NA	34392669	34279678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_80423.known	chr6	-	4782	9	FSM	ENSG00000270800.3	ENST00000639725.1	4782	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	4723.79693017174	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTCAAGTTCCTTTG	-34211711	True	NA	NA	False	NA	NA	NA	34426071	34284886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_80427.known	chr6	-	1053	5	FSM	ENSG00000186577.14	ENST00000481533.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	49.3203811826308	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247773	True	NA	-26	True	AATAAA	-15	NA	34248989	34246394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
transcript_80428.known	chr6	-	818	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	27.2889629704025	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247790	True	NA	-26	True	AATAAA	-15	NA	34249006	34246394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
transcript_80429.known	chr6	-	903	5	FSM	ENSG00000186577.14	ENST00000468145.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	62.3718686588754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCAGGCTTTGGAGTT	-34247773	True	NA	-116	True	NA	NA	NA	34248989	34246484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248726
transcript_80430.known	chr6	-	792	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	53.6300988251933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247824	True	NA	-26	True	AATAAA	-15	NA	34249040	34246394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
transcript_80431.known	chr6	-	1093	4	FSM	ENSG00000186577.14	ENST00000637920.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68.5143942702716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247839	True	NA	-26	True	AATAAA	-15	NA	34249055	34246394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248726
transcript_80432.known	chr6	-	806	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	64.5652125115891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247804	True	NA	-26	True	AATAAA	-15	NA	34249020	34246394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
transcript_80434.known	chr6	-	363	1	FSM	ENSG00000220583.1	ENST00000402419.1	363	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGCGCATTGTCC	NA	False	NA	NA	False	NA	NA	NA	34263673	34263310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34263300_34263700
transcript_80435.known	chr6	-	777	6	FSM	ENSG00000124614.16	ENST00000467531.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_5	4040.98218753807	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34425763	False	NA	-5	True	AATAAA	-22	NA	34425784	34417453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425557
transcript_80436.known	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	7167	junction_5	1530.98169812705	14903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211709	True	NA	-5	True	AATAAA	-22	NA	34426069	34417453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_80437.known	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_5	3414.76332415586	3083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211666	True	NA	-5	True	AATAAA	-22	NA	34426026	34417453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_80438.known	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4681.31711344859	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211692	True	NA	-5	True	AATAAA	-22	NA	34426052	34417453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_80439.known	chr6	-	1407	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	7167	junction_4	1578.5908866771	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211707	True	NA	-5	True	AATAAA	-22	NA	34426067	34417453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_80440.known	chr6	-	4338	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.747548783982	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-34695673	True	NA	-15	True	ATTAAA	-22	NA	34696767	34587287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
transcript_80442.known	chr6	+	718	2	FSM	ENSG00000272288.7	ENST00000606971.5	718	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	34696316	34697470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34696723_34697158
transcript_80443.known	chr6	+	365	2	FSM	ENSG00000272288.7	ENST00000606496.2	371	2	5	1	5	0	multi-exon	FALSE	canonical	3	32	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	34696286	True	NA	9	True	AATAAA	-15	NA	34696944	34697470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34696998_34697158
transcript_80446.known	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	409.602050776116	3240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	34738575	True	NA	7	True	TATAAA	-18	NA	34757504	34773857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_80451.known	chr6	+	600	5	FSM	ENSG00000124562.10	ENST00000374018.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1281.16107008448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTGGGACAAAAAAGA	34738595	True	NA	-56	True	NA	NA	NA	34757524	34773714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34757552_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_80453.known	chr6	+	1054	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_3	168.690545081815	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTCCCTTTTTCCTCC	34738624	True	NA	24	True	AATAAA	-24	NA	34757553	34773794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_80454.known	chr6	-	1945	6	FSM	ENSG00000064995.19	ENST00000650109.1	1945	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	172.257249484601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-34879569	True	NA	NA	False	AATACA	-39	NA	34888027	34877461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34878721_34879625_34879737_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_80455.nnic	chr6	-	1621	6	NNC	ENSG00000064995.19	novel	1849	5	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	163.994390147956	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGGTGTATTCATTTTC	-34879591	True	NA	-4	True	ATTAAA	-16	NA	34888049	34877778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34883398_34883481_34887786
transcript_80458.known	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	17.1828402774396	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-34879584	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_80460.known	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	151.085700477871	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	-34879613	True	NA	-3	True	ATTAAA	-17	NA	34888071	34877777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
transcript_80461.nic	chr6	-	404	2	FSM	ENSG00000064995.19	ENST00000693481.1	562	2	-55	213	-14	-213	multi-exon	FALSE	canonical	3	367	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAGAAAAAGCA	-34888078	False	NA	NA	False	AATAGA	-8	NA	34888094	34882984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34883081_34887786
transcript_80464.known	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	22.5345413877353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	35259746	False	NA	8	True	AATAAA	-14	NA	35259773	35295983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_80466.nic	chr6	+	1776	5	ISM	ENSG00000065029.15	ENST00000373953.8	2653	14	-21	7020	-21	650	5prime_fragment	TRUE	canonical	3	98	junction_1	8.78564169540279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTCACAAAACTTTA	35259052	True	NA	NA	False	NA	NA	NA	35259713	35288965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645
transcript_80467.known	chr6	+	2653	14	FSM	ENSG00000065029.15	ENST00000373953.8	2653	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	17.1277828905426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCCTCCATCCTTT	35259073	True	NA	10	True	AATAAA	-16	NA	35259734	35295985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_80468.nnic	chr6	+	1438	5	NNC	ENSG00000023892.11	novel	2296	11	NA	NA	996	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.0736484091261	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	35318510	True	NA	NA	False	AATAAA	-19	NA	35318603	35321771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_35319000_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_80470.nnic	chr6	+	845	3	NNC	ENSG00000112033.14	novel	3453	6	NA	NA	-9	-68537	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	51.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTCTTACATTAGAAG	35340477	True	NA	8	True	AATAAA	-17	NA	35342548	35356856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_35342682_35347066_35347151_35356228
transcript_80483.known	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1858.10047091109	21407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	35276971	True	NA	23	True	AATAAA	-15	NA	35468400	35470780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_80484.known	chr6	+	1069	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1963.28888602773	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276978	True	NA	28	True	AATAAA	-20	NA	35468407	35470785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
transcript_80485.known	chr6	+	962	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_3	5185.38750721679	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276990	True	NA	28	True	AATAAA	-20	NA	35468419	35470785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
transcript_80486.known	chr6	+	1063	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	0	0	0	0	multi-exon	FALSE	canonical	3	14193	junction_4	173.618835383722	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276990	True	NA	28	True	AATAAA	-20	NA	35468419	35470785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_80487.known	chr6	-	2986	13	FSM	ENSG00000007866.22	ENST00000338863.13	2986	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_12	23.6619713652284	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495680	True	NA	-2	True	ATTAAA	-29	NA	35497079	35473596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460_35486712_35496897
transcript_80490.known	chr6	-	2120	15	FSM	ENSG00000112041.13	ENST00000229771.11	2120	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.36649890534499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGCGGTGGTTCCTCAG	-35512734	True	NA	-4	True	AATAAA	-18	NA	35512896	35497873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35498461_35499980_35500153_35503558_35503658_35503736_35503849_35505740_35505854_35506002_35506174_35506273_35506280_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647_35511807_35512179_35512271_35512638_35512691_35512811
transcript_80493.nnic	chr6	-	1360	9	NNC	ENSG00000112041.13	novel	492	6	NA	NA	-48	1932	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	6.17960354715414	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATCTTTGTGGATTCTT	NA	False	NA	NA	False	AATAAA	-30	NA	35512944	35507791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_35508244_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647_35511807_35512179_35512271_35512638_35512691_35512811
transcript_80498.known	chr6	+	392	1	FSM	ENSG00000219023.1	ENST00000403958.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	35555872	35556264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35555900_35556300
transcript_80499.known	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	2	230	junction_7	44.3594409342589	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	-35683637	True	NA	-10	True	AATAAA	-17	NA	35688915	35573589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_8050.known	chr1	-	895	6	FSM	ENSG00000163479.14	ENST00000480567.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	721.592849188516	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCCTTGGTTCCA	-155997658	True	NA	NA	False	NA	NA	NA	156020889	156009359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020726
transcript_80503.known	chr6	+	426	3	FSM	ENSG00000196748.10	ENST00000403376.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776320	True	NA	2	True	ATTAAA	-14	NA	35776597	35779552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35776703_35777458_35777582_35779354
transcript_80504.known	chr6	+	532	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776316	True	NA	2	True	ATTAAA	-14	NA	35776593	35779552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35776805_35777458_35777582_35779354
transcript_80505.known	chr6	+	313	2	FSM	ENSG00000196748.10	ENST00000467122.1	313	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776412	False	NA	2	True	ATTAAA	-14	NA	35776689	35779552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35776805_35779354
transcript_80506.known	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_4	65.2368675588343	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-35908012	True	NA	-2	True	AGTAAA	-13	NA	35921098	35832965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_80507.known	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	211.040912305332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-35908061	True	NA	-9	True	AATAAA	-20	NA	35921147	35833033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
transcript_80521.nic	chr6	-	734	6	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-72	53616	-23	144	5prime_fragment	FALSE	canonical	3	770	junction_1	74.8705549598773	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGAATTTTGTCTAATT	-35908084	True	NA	-1	True	AATAAA	-33	NA	35921170	35886581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_80523.nic	chr6	-	581	4	ISM	ENSG00000096063.16	ENST00000513367.1	634	5	3	753	0	-753	5prime_fragment	FALSE	canonical	3	802	junction_3	83.5384143174065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGTCGTTTGATTTTT	-35908012	True	NA	NA	False	ATTAAA	-15	NA	35921098	35888577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35888924_35890894_35891014_35920467_35920529_35921043
transcript_80524.known	chr6	+	6316	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.82768977877428	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGCACAGACCCCTG	36130021	True	NA	4	True	AATAAA	-18	NA	36130512	36144521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
transcript_80527.known	chr6	+	6196	10	FSM	ENSG00000156711.17	ENST00000373766.9	6196	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.6128436746828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCACAGACCCCTGAAT	36130442	False	NA	7	True	AATAAA	-21	NA	36130483	36144524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36138701_36138781_36138878_36139056_36139293
transcript_80528.known	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_3	25.7871982161059	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	36439629	True	NA	4	True	AATAAA	-14	NA	36442999	36491141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_80531.nic	chr6	+	1262	6	ISM	ENSG00000112078.14	ENST00000373731.7	5384	8	17	9117	0	-5382	5prime_fragment	FALSE	canonical	3	158	junction_3	27.2954208613826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTAAATCCTTTTGA	36439646	True	NA	27	True	ATTAAA	-24	NA	36443016	36482024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561
transcript_80533.known	chr6	-	1434	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.03960780543711	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-36387746	True	NA	-3	True	AATAAA	-15	NA	36387800	36366194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
transcript_80535.known	chr6	-	3585	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	27.7970242330545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-36545254	True	NA	-10	True	AATAAA	-14	NA	36547479	36493891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_80537.nic	chr6	-	1190	7	ISM	ENSG00000112079.9	ENST00000229812.8	3585	14	2	21218	2	-21218	5prime_fragment	FALSE	canonical	3	37	junction_6	34.4790596675077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGCAAAATTGATGTAG	-36545252	True	NA	NA	False	AATAAA	-14	NA	36547477	36515109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_80542.known	chr6	+	2376	1	FSM	ENSG00000112081.17	ENST00000614136.1	2376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAACTTGAAAGCCTGTT	36600053	False	NA	23	True	ATTAAA	-20	NA	36600402	36602778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36600400_36602800
transcript_80543.known	chr6	+	2104	4	FSM	ENSG00000124762.14	ENST00000448526.6	2104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.97942190786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676243	True	NA	30	True	AATAAA	-24	NA	36676489	36687337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36676525_36677901_36677934_36684096_36684547_36685750
transcript_80546.known	chr6	+	2102	3	FSM	ENSG00000124762.14	ENST00000615513.4	2102	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	112.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676213	True	NA	30	True	AATAAA	-24	NA	36676459	36687337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36676525_36684096_36684547_36685750
transcript_80547.known	chr6	+	2117	3	FSM	ENSG00000124762.14	ENST00000244741.10	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	2	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATATTACTATTGTG	36674316	True	NA	25	True	AATAAA	-19	NA	36678713	36687332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36678799_36684096_36684547_36685750
transcript_80548.known	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36674312	True	NA	30	True	AATAAA	-24	NA	36678709	36687337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36678940_36684096_36684547_36685750
transcript_80549.known	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.920982290514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	36884594	True	NA	14	True	ATTAAA	-19	NA	36885951	36928964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_80550.known	chr6	+	1309	8	FSM	ENSG00000198663.17	ENST00000355190.7	1309	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.96705990084298	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTCTGGGGGTTGGTT	36884506	True	NA	5	True	AATAAA	-17	NA	36885863	36923522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_80552.known	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	13.4742552876052	1397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-36874784	False	NA	-21	True	AATAAA	-20	NA	36874803	36854828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
transcript_80553.known	chr6	-	1955	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_4	539.922568675629	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	-36966301	True	NA	-7	True	AATAAA	-18	NA	36986196	36968140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_80554.known	chr6	-	2006	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_4	396.87837719003	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	NA	False	NA	-7	True	AATAAA	-18	NA	36986298	36968140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_80556.known	chr6	+	3462	13	FSM	ENSG00000065491.8	ENST00000373491.3	3462	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	11.9172494030012	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	37256501	True	NA	10	True	AATAAA	-20	NA	37257771	37332970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_80559.nic	chr6	+	2292	9	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	125.668151792727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353963	37391231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_80561.known	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	106.524118185048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	37347682	True	NA	-51	True	NA	NA	NA	37354014	37391168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_80564.known	chr6	+	5616	8	FSM	ENSG00000112130.17	ENST00000373479.9	5616	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	40.4464877009975	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCAAATGCCCATTTTC	37347650	True	NA	NA	False	AATAAA	-16	NA	37353982	37394734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_80572.known	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	113.516029215653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	37347758	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
transcript_80573.nic	chr6	+	2062	7	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	111.467110246326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353943	37391231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37376925_37377034_37381149_37381355_37390741
transcript_80579.known	chr6	+	4034	24	FSM	ENSG00000137200.13	ENST00000373451.9	4034	24	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_11	18.6546567720144	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	37430344	True	NA	13	True	ATTAAA	-18	NA	37433220	37481508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_80580.known	chr6	-	572	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	34.08160142299	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCTGCTGAGTAAATG	-37496410	True	NA	NA	False	AATAAA	-15	NA	37499893	37482937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
transcript_80586.known	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_3	106.558903898267	3617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-38661254	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
transcript_80594.known	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-39114253	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39105777_39114882
transcript_80597.known	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.9451873154003	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39225210	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
transcript_80599.nic	chr6	-	2234	4	NIC	ENSG00000164627.18	novel	2035	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCATTATGTTTGGCTT	-39725309	True	NA	NA	False	AATAAA	-14	NA	39725408	39689977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_39691863_39714691_39714767_39720701_39720812_39725244
transcript_8060.known	chr1	+	621	4	FSM	ENSG00000116586.12	ENST00000368305.9	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_3	89.1827088372828	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156044136	True	NA	37	True	AATAAA	-16	NA	156054781	156058506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156054958_156055262_156055426_156057977_156058068_156058314
transcript_80600.known	chr6	+	2186	3	FSM	ENSG00000146122.17	ENST00000475489.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	39792208	True	NA	NA	False	NA	NA	NA	39792395	39862819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_39792466_39856246_39856471_39860927
transcript_80601.known	chr6	-	3358	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	13.9728307797669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	39934551	39905058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_80604.known	chr6	-	4143	11	FSM	ENSG00000124615.20	ENST00000340692.10	4143	11	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	34.706771673551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCCATAGTCCTTTTG	-39931886	True	NA	-14	True	NA	NA	NA	39934462	39904169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39907118_39909054_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_80606.nic	chr6	-	2707	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	6	-202	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	32.3457402694736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAGAATGAAGACACT	-39931915	True	NA	NA	False	AATAAA	-21	NA	39934491	39905522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_80607.known	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	45.8768732587564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-39931921	True	NA	-18	True	AATAAA	-19	NA	39934497	39905320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_80608.nnic	chr6	+	860	3	NNC	ENSG00000204091.8	novel	856	2	NA	NA	-49013	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	40285706	True	NA	6	True	AATAAA	-17	NA	40285761	40379887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_40285873_40337116_40337260_40379281
transcript_80609.nnic	chr6	+	844	3	NNC	ENSG00000204091.8	novel	856	2	NA	NA	-5867	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	40328827	True	NA	6	True	AATAAA	-17	NA	40328907	40379887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_40329003_40337116_40337260_40379281
transcript_80611.known	chr6	+	6209	10	FSM	ENSG00000001167.15	ENST00000341376.11	6209	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	41.9217377832245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTCAAGTGTGTATTC	41070780	True	NA	11	True	AATAAA	-21	NA	41072973	41102403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41073085_41079028_41079165_41080810_41080898_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_80613.known	chr6	+	1660	9	FSM	ENSG00000001167.15	ENST00000353205.5	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	12.7567384154415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCTGTGGTAATAATAAG	41070789	True	NA	NA	False	AATAAA	-20	NA	41072982	41097950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_80614.known	chr6	-	3184	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.576841611016	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-41072345	False	NA	-20	True	AATAAA	-26	NA	41072356	41064771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
transcript_80615.known	chr6	-	3330	6	FSM	ENSG00000124596.17	ENST00000479950.5	3330	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	115.291977171007	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTGGGATGTGGCT	-41072580	False	NA	-26	True	AATAAA	-20	NA	41072591	41064777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_80616.known	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.24407565583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-41071907	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_80622.known	chr6	-	1188	5	FSM	ENSG00000124596.17	ENST00000628419.2	1188	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	117.020030336691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTTCTGTGCTTATG	-41072566	False	NA	-8	True	AATAAA	-14	NA	41072577	41066792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_80625.known	chr6	-	1129	5	FSM	ENSG00000124596.17	ENST00000373154.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	140.9858148893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTGCTTATGTCTAT	-41072518	False	NA	-3	True	AATAAA	-19	NA	41072529	41066787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_80629.known	chr6	-	832	4	FSM	ENSG00000124596.17	ENST00000482515.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	133.751843185638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAAGGAGTTAGGTG	-41072603	False	NA	NA	False	NA	NA	NA	41072614	41067126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41071131_41071277_41071595_41071676_41072318
transcript_8063.known	chr1	+	521	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	744.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156044146	True	NA	37	True	AATAAA	-16	NA	156054791	156058506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156054958_156055262_156055426_156058314
transcript_80630.known	chr6	-	717	4	FSM	ENSG00000124596.17	ENST00000464633.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	149.87179706521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTGTGTTTTTTTGTGG	-41072523	False	127	NA	False	NA	NA	NA	41072534	41067145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41071131_41071277_41071595_41071676_41072334
transcript_80631.known	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	97.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	-41072309	False	NA	-8	True	AATAAA	-21	NA	41072320	41071040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41071277_41071595_41071676_41072235
transcript_80632.known	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	90.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-41071908	True	NA	NA	False	NA	NA	NA	41072490	41070824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41071277_41071595_41071676_41072318
transcript_80633.known	chr6	+	4569	23	FSM	ENSG00000161912.18	ENST00000567255.2	4569	23	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	2.687974443995	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTAGATTTTTTTTC	41101021	False	NA	21	True	AATAAA	-22	NA	41101033	41140835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41101179_41102009_41102115_41105109_41105149_41108304_41108510_41108948_41109905_41111222_41111357_41117297_41117383_41117475_41117666_41118128_41118185_41118923_41119108_41119240_41119464_41120522_41120658_41121345_41121475_41121785_41121944_41122976_41123250_41124484_41124821_41127544_41127609_41132293_41132514_41135184_41135342_41137356_41137562_41138608_41138727_41139855_41140070_41140597
transcript_80636.known	chr6	-	422	2	FSM	ENSG00000124596.17	ENST00000467234.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTCTCTAGCTGAT	-41072552	False	NA	NA	False	ATTAAA	-18	NA	41072563	41071498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41071676_41072318
transcript_80637.known	chr6	-	983	5	FSM	ENSG00000095970.17	ENST00000373113.8	983	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTGGGCATCATGAAA	NA	False	NA	NA	False	AATAAA	-26	NA	41163116	41158507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41158781_41158872_41159067_41159791_41159883_41161262_41161614_41163042
transcript_80640.known	chr6	-	419	2	FSM	ENSG00000234753.6	ENST00000414386.6	453	2	34	0	-7	0	multi-exon	FALSE	canonical	3	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	-41545921	True	NA	-11	True	ATTAAA	-28	NA	41546176	41523894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41524226_41546088
transcript_80641.known	chr6	-	404	2	FSM	ENSG00000234753.6	ENST00000439386.2	571	2	161	6	95	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATATCGCCAGACCTG	-41545819	False	NA	-13	True	ATTAAA	-26	NA	41546074	41523896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41524226_41545999
transcript_80643.known	chr6	-	2188	9	FSM	ENSG00000112561.19	ENST00000358871.6	2188	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	3.73329613076702	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41736192	True	NA	0	True	AGTAAA	-15	NA	41736259	41683977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41736145
transcript_80646.known	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	500.5	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	41766950	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_80647.known	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	316.5	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	41766982	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_80648.nic	chr6	-	2224	3	ISM	ENSG00000288721.1	ENST00000683313.1	1190	6	0	98814	0	-98814	5prime_fragment	FALSE	canonical	3	15	junction_1	177	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-41917437	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_41907288_41916784_41916940_41921004
transcript_80649.known	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	13.2748718344933	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-41917437	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
transcript_8065.known	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_2	107.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156055068	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156055426_156057977_156058068_156058314
transcript_80650.known	chr6	-	932	4	FSM	ENSG00000124641.16	ENST00000409312.5	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	158.191866626153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACCTTGCCTCCTTTA	-41917417	True	NA	NA	False	NA	NA	NA	41921119	41906803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41907288_41909344_41909523_41916784_41916940_41921004
transcript_80651.known	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-41917437	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41907288_41909268_41909523_41921004
transcript_80655.known	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_1	13.4866188827626	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	41919049	True	NA	18	True	GATAAA	-24	NA	41921498	41933046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_80656.known	chr6	+	1153	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	76.5992167061779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTCCCCCGCGA	41919084	True	NA	NA	False	NA	NA	NA	41921533	41932655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_80658.known	chr6	-	2026	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	10.779030568655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-41939078	True	NA	-18	True	AATAAA	-19	NA	41941808	41934951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
transcript_80659.known	chr6	-	1843	4	FSM	ENSG00000112576.13	ENST00000415497.6	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	111.398184704938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	-42048867	False	NA	-22	True	AATAAA	-15	NA	42048894	41934955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_42048500
transcript_80662.known	chr6	+	1066	6	FSM	ENSG00000137413.17	ENST00000482926.1	1066	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.5766768916142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTTTTTTAGAGGT	42047053	True	NA	NA	False	NA	NA	NA	42050538	42063759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42063185
transcript_80665.known	chr6	+	794	5	FSM	ENSG00000137413.17	ENST00000372978.7	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	4.12310562561766	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	42050490	False	NA	NA	False	AATAAA	-23	NA	42050512	42057789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_80666.nnic	chr6	+	801	5	NNC	ENSG00000137413.17	novel	794	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	41.3060225633018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGATTATCTTTCAT	42047037	True	NA	NA	False	AATAAA	-20	NA	42050522	42057786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056035_42057388
transcript_80667.known	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-42137256	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42126844_42128671_42128779_42142299
transcript_80668.known	chr6	+	2520	3	FSM	ENSG00000048545.17	ENST00000679182.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	6	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCAAGCACGGTGAA	NA	False	NA	NA	False	NA	NA	NA	42178099	42181338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42178430_42178801_42178896_42179242
transcript_8067.known	chr1	+	1100	5	FSM	ENSG00000132698.15	ENST00000361084.10	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	32.4152741774615	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	156058158	True	NA	26	True	AATAAA	-16	NA	156061159	156070504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156061444_156065910_156066107_156068269_156068464_156069670_156069752_156070159
transcript_80675.known	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	749	junction_5	35.8685873091701	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	-42210826	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
transcript_80676.nic	chr6	+	823	2	ISM	ENSG00000024048.11	ENST00000372903.6	2423	12	-69	46200	-36	-46200	5prime_fragment	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGTAATTATTCTTG	42560388	True	NA	NA	False	AATAAA	-14	NA	42563992	42574151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_42564398_42573733
transcript_80677.known	chr6	-	3001	3	FSM	ENSG00000112619.8	ENST00000230381.7	3001	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTGTTAAATGACTG	NA	False	NA	-2	True	ATTAAA	-19	NA	42722597	42696597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42698508_42704364_42704612_42721753
transcript_80678.known	chr6	-	1606	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGGTTTGTTTGGTGT	-42742684	True	NA	-39	True	AATAAA	-17	NA	42746103	42744497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42744500_42746100
transcript_8068.known	chr1	+	681	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	75.7246473892234	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	156058381	False	NA	26	True	AATAAA	-16	NA	156061382	156070504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
transcript_80684.known	chr6	+	3769	7	FSM	ENSG00000146223.16	ENST00000304734.9	3769	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_6	144.823743449293	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTGAACAAGTTGTGAG	42879666	False	NA	54	True	NA	NA	NA	42879681	42889925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_8070.known	chr1	+	868	3	FSM	ENSG00000132698.15	ENST00000487325.5	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	61	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCATGGGCTCTAAATC	156058204	True	NA	NA	False	NA	NA	NA	156061205	156070106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156061444_156068269_156068464_156069670
transcript_80700.known	chr6	+	1103	6	FSM	ENSG00000146223.16	ENST00000483998.6	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	210.62440504367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCGTGGTGGCTCATG	42879160	True	NA	NA	False	AAGAAA	-13	NA	42879617	42887301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_80704.known	chr6	+	4499	6	FSM	ENSG00000146223.16	ENST00000493763.7	4499	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	51.2109363319985	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATGTACCATGACATA	42879158	True	NA	29	True	AATAAA	-26	NA	42879615	42889900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_80707.known	chr6	+	1702	6	FSM	ENSG00000146223.16	ENST00000397415.7	1702	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	196.820324153782	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	42879181	True	NA	NA	False	NA	NA	NA	42879638	42887010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42881083_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_80711.nic	chr6	+	1517	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	-16	291	-14	0	5prime_fragment	FALSE	canonical	3	78	junction_1	195.661697835831	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	NA	False	NA	NA	False	NA	NA	NA	42879601	42887010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_80714.known	chr6	+	703	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	55.7673739743947	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	42877413	True	NA	24	True	AATAAA	-21	NA	42879932	42886249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
transcript_80719.known	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	-42889992	True	NA	-1	True	AATAAA	-17	NA	42890821	42890264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42890300_42890800
transcript_8072.known	chr1	+	1514	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	55.4576915815611	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	156125917	True	NA	12	True	ATTAAA	-19	NA	156126174	156137866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_80726.nnic	chr6	+	1572	7	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	301.181930991146	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42919351	True	NA	50	True	NA	NA	NA	42929400	42939294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_42929722_42934474_42934599_42935411_42935474_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_8073.nnic	chr1	+	650	3	NNC	ENSG00000160789.24	novel	472	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	NA	False	NA	22	True	AATAAA	-18	NA	156082571	156093811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_156082664_156082947_156083185_156093490
transcript_80738.known	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	84.1817082269064	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42919430	True	NA	50	True	NA	NA	NA	42929479	42939294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_8075.nnic	chr1	+	1320	4	NNC	ENSG00000160785.14	novel	3467	4	NA	NA	-15	-1915	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	85.3502587381355	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAATGCTTCTCACTCT	156189998	True	NA	NA	False	AATAAA	-34	NA	156194087	156208512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_156194248_156199834_156200473_156207885_156208014_156208118
transcript_80752.nnic	chr6	+	1614	5	NIC	ENSG00000137161.18	novel	1431	6	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	290.342900722577	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42928882	True	NA	50	True	NA	NA	NA	42929172	42939294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_42929722_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_80757.nic	chr6	+	1467	3	ISM	ENSG00000137161.18	ENST00000372836.5	1431	6	-309	2929	-309	-2929	5prime_fragment	FALSE	canonical	3	510	junction_2	53.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTAAGAATTATTTTTC	42928880	True	NA	NA	False	AATAAA	-23	NA	42929170	42936365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_42929722_42934474_42934599_42935573
transcript_8076.known	chr1	+	3467	4	FSM	ENSG00000160785.14	ENST00000359511.5	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	15.2825245151302	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTGCGCGTATTT	156190014	True	NA	14	True	ATTAAA	-21	NA	156194103	156212796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156194248_156199834_156200473_156207885_156208014_156210239
transcript_80760.known	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	37	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	-42929367	False	NA	NA	False	AATAAA	-27	NA	42929457	42928286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42928647_42929164
transcript_80761.known	chr6	+	1076	6	FSM	ENSG00000124713.6	ENST00000372808.4	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.07921561087423	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTTATTTATGT	42960528	True	NA	6	True	AATATA	-20	NA	42960753	42963880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42960974_42962211_42962340_42962761_42962879_42963071_42963215_42963327_42963450_42963534
transcript_80763.known	chr6	+	2894	16	FSM	ENSG00000112640.16	ENST00000394110.7	2894	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	105.414609993112	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	42978730	True	NA	22	True	AATAAA	-16	NA	42984552	43012342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42984705_42989610_42989689_43006462_43006607_43006933_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_80764.known	chr6	+	2973	16	FSM	ENSG00000112640.16	ENST00000485511.6	2973	16	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	34.1701624227922	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	42978747	True	NA	22	True	AATAAA	-16	NA	42984569	43012342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42984705_42989610_42989689_43006462_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_80771.known	chr6	+	1869	11	FSM	ENSG00000124702.19	ENST00000326974.9	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_3	62.3795639612846	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGTGTTTTTGTGG	42992404	True	NA	23	True	ATTAAA	-10	NA	43014248	43021294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_80784.known	chr6	+	1903	10	FSM	ENSG00000124702.19	ENST00000244670.12	1903	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	433.449215274664	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTTTGTGGAATA	43014092	False	NA	27	True	ATTAAA	-14	NA	43014102	43021298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_80796.known	chr6	-	2018	4	FSM	ENSG00000124733.5	ENST00000244711.4	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	654.830936620709	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-42992618	True	NA	NA	False	NA	NA	NA	43013946	43011142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013785
transcript_80797.known	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_3	291.088760804444	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	-43013973	False	NA	-2	True	AATAAA	-28	NA	43013983	43012081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
transcript_80799.known	chr6	+	1494	12	NNC	ENSG00000124702.19	novel	1869	11	NA	NA	6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	393.111785670511	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTTGTGTGTTTTTG	42992410	True	NA	20	True	ATTAAA	-7	NA	43014254	43021291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666_43020726_43021091
transcript_80802.known	chr6	+	2361	16	FSM	ENSG00000137171.15	ENST00000347162.10	2361	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	16.0549057923116	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43058558	True	NA	16	True	AATAAA	-17	NA	43059630	43075093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_80804.known	chr6	-	1216	7	FSM	ENSG00000112651.12	ENST00000388752.8	1216	7	0	0	0	0	multi-exon	TRUE	canonical	1	202	junction_4	134.7772854255	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTTCTGACTTTGG	-43053907	True	NA	-1	True	AATAAA	-15	NA	43059434	43054028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43054487_43055544_43055619_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_8081.known	chr1	+	1007	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_6	533.269918104852	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCAGTTTATGGAGT	156200077	True	NA	21	True	AATAAA	-30	NA	156212981	156243332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_80811.known	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	223.333472636772	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	-43053867	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_80814.known	chr6	-	570	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	259	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTACTGTGGTTTT	-43053907	True	NA	NA	False	AATAAA	-20	NA	43059434	43054234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43054487_43058064_43058234_43059285
transcript_80816.known	chr6	-	689	2	FSM	ENSG00000112651.12	ENST00000468957.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGCTGGCCAACATG	-43053911	True	NA	NA	False	NA	NA	NA	43059438	43057697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43058234_43059285
transcript_80817.known	chr6	-	409	1	FSM	ENSG00000272170.1	ENST00000606123.1	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATTATTTAATACTTT	-43074607	False	NA	1	True	ATTAAA	-23	NA	43074739	43074330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43074300_43074700
transcript_80818.known	chr6	+	2770	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	28.4164757447154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	43059582	True	NA	10	True	AATAAA	-11	NA	43059894	43075087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_8082.known	chr1	+	852	7	FSM	ENSG00000260238.6	ENST00000368276.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	515.658290171139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGGGTCCCCATCAT	156200102	True	NA	-48	True	NA	NA	NA	156213006	156243263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156242552_156242592_156242761_156242832_156243032
transcript_80821.known	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_1	18.4028983224563	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-43219013	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
transcript_80822.known	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_2	1	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-43219010	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43226144_43226326_43226396_43229260
transcript_80824.nnic	chr6	-	1111	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	76.1949701055638	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305390	True	NA	-14	True	AATAAA	-14	NA	43308875	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_80825.known	chr6	-	991	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	50.7004005136537	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305341	True	NA	-14	True	AATAAA	-14	NA	43308826	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_80828.nnic	chr6	-	979	7	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.0995598917316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305390	True	NA	-14	True	AATAAA	-14	NA	43308875	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_80830.nic	chr6	-	1380	7	ISM	ENSG00000146215.14	ENST00000372569.8	991	8	-49	0	-49	0	intron_retention	FALSE	canonical	3	117	junction_4	54.6859722008812	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305390	True	NA	-14	True	AATAAA	-14	NA	43308875	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
transcript_80832.nnic	chr6	-	908	7	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_4	61.4747012102449	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305390	True	NA	-14	True	AATAAA	-14	NA	43308875	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_80843.nnic	chr6	-	1248	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-49	0	intron_retention	FALSE	canonical	3	83	junction_4	67.1922614591889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305390	True	NA	-14	True	AATAAA	-14	NA	43308875	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314
transcript_80844.nnic	chr6	-	850	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	88.5650043753175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305390	True	NA	-14	True	AATAAA	-14	NA	43308875	43305471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43308314_43308410_43308749
transcript_80862.known	chr6	-	773	3	FSM	ENSG00000146215.14	ENST00000485819.1	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	48	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTCATTCTTGGCAAA	-43305303	True	NA	NA	False	NA	NA	NA	43308788	43307502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43307744_43307838_43307897_43308314
transcript_80866.known	chr6	+	2695	11	FSM	ENSG00000137221.14	ENST00000372449.5	2695	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	52.5947716032687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474755	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_80868.known	chr6	+	2665	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	23.0592366539252	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474755	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_80869.known	chr6	+	2751	11	FSM	ENSG00000137221.14	ENST00000372445.9	2751	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	53.4846707010523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_8087.known	chr1	+	837	6	FSM	ENSG00000160783.19	ENST00000497069.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	537.73316803039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGAATTTGCTGGAGG	156200121	True	NA	NA	False	NA	NA	NA	156213025	156239718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156225556_156225669_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_80871.known	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	2	340	junction_9	49.2948190821862	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-43565697	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_80874.known	chr6	+	1275	9	FSM	ENSG00000171453.20	ENST00000642195.1	1275	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_4	17.1823856027037	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510712	True	NA	NA	False	AATAAA	-19	NA	43517088	43521513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_80875.known	chr6	+	1280	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	103.297431599242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTATTAATAAGGGTC	43510712	True	NA	NA	False	AAAAAG	-17	NA	43517088	43529585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
transcript_80882.known	chr6	+	1334	9	FSM	ENSG00000171453.20	ENST00000645141.1	1334	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	101.759520439122	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510720	True	NA	NA	False	AATAAA	-19	NA	43517096	43521513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519906_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_80885.nic	chr6	-	1449	9	NIC	ENSG00000137207.12	novel	1507	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	156.418459188805	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	-43516954	False	NA	-33	True	ATTAAA	-21	NA	43516970	43511831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513099_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_80891.known	chr6	-	1507	9	FSM	ENSG00000137207.12	ENST00000372422.7	1507	9	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_8	17.0655903794741	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	-43507040	True	NA	-33	True	ATTAAA	-21	NA	43516926	43511831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_80892.known	chr6	-	1321	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	159.131971567627	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	-43516956	False	NA	-72	True	NA	NA	NA	43516972	43512158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
transcript_80897.known	chr6	+	1119	8	FSM	ENSG00000171453.20	ENST00000372344.6	1119	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	108.440898979253	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTTTTGAGACTA	43510711	True	NA	NA	False	AATAAA	-12	NA	43517087	43521506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520931_43521049_43521181
transcript_8090.known	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_3	45.18849411078	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	156200102	True	NA	42	True	AATAAA	-21	NA	156213006	156240042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_80900.nic	chr6	+	1508	8	NIC	ENSG00000171453.20	novel	1334	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_1	16.8013604891305	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510706	True	NA	NA	False	AATAAA	-19	NA	43517082	43521513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_8091.known	chr1	+	1019	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	457.978984233993	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	156200088	True	NA	40	True	AATAAA	-19	NA	156212992	156240040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
transcript_8092.known	chr1	+	655	5	FSM	ENSG00000260238.6	ENST00000567140.3	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	30.0873727666608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTCCTCTTCCCC	156200104	True	NA	-97	True	NA	NA	NA	156213008	156243214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_8093.known	chr1	+	884	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	533.96927580152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	156200101	True	NA	NA	False	NA	NA	NA	156213005	156239851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
transcript_80932.known	chr6	-	882	1	FSM	ENSG00000219470.1	ENST00000402069.1	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	-43539693	False	NA	NA	False	NA	NA	NA	43539703	43538821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43538800_43539700
transcript_80933.known	chr6	-	3031	12	FSM	ENSG00000172432.19	ENST00000307126.10	3031	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	13.3824851612437	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGCTTATGCGTTA	-43626286	True	NA	NA	False	AATAAA	-15	NA	43629264	43620493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
transcript_80935.known	chr6	+	8368	11	FSM	ENSG00000170734.12	ENST00000372236.9	8368	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	4.7549973711875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTGTATTTAAATATA	43574298	True	NA	NA	False	AATAAA	-22	NA	43576184	43620523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587490_43597695_43597866_43600987_43601092_43603891_43604012_43604614_43604739_43605253_43605320_43610553_43610724_43613659
transcript_80937.nnic	chr6	+	1273	5	NNC	ENSG00000170734.12	novel	8368	11	NA	NA	-7	4627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9.12414379544733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTCTATTTCTGTATG	43574291	True	NA	16	True	ATTAAA	-17	NA	43576177	43592027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587595_43591616
transcript_80942.known	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	146.84761565045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	43629385	True	NA	-12	True	AATATA	-1	NA	43629539	43640919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
transcript_80943.known	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	10	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	43631811	True	NA	10	True	AATAAA	-16	NA	43635839	43640941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43635922_43636380_43636647_43640020
transcript_80946.known	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_2	48.3793344311391	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	-43681136	True	NA	NA	False	AAGAAA	-15	NA	43687791	43671201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_80948.known	chr6	+	2545	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.92028643696715	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCCATCCTTCATTC	43644987	True	NA	NA	False	AATAAA	-17	NA	43645035	43672600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
transcript_80950.known	chr6	-	803	5	FSM	ENSG00000096080.12	ENST00000427312.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_1	42.0773097999385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGAAGCTGTATCACT	-43681136	True	NA	NA	False	NA	NA	NA	43687791	43671783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43671907_43675201_43675618_43678517_43678626_43681088_43681121_43687667
transcript_80951.known	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	316.065954351303	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	-43681136	True	NA	-60	True	GGGGCT	-15	NA	43687791	43671509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_80960.known	chr6	+	993	7	FSM	ENSG00000112715.26	ENST00000230480.10	993	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	73.7015377496743	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATATATATAAAAATAAA	43771781	True	NA	NA	False	NA	NA	NA	43771991	43784935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43772102_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43781955_43782088_43784540
transcript_80971.known	chr6	-	957	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_2	142.5	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGTTTTTATTTTTC	-44114173	True	NA	-26	True	TATAAA	-23	NA	44127452	44113450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44114210_44116540_44116630_44127343
transcript_80976.nnic	chr6	-	699	3	NNC	ENSG00000180992.7	novel	957	3	NA	NA	-24	-243	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	771.5	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-44114197	True	NA	-13	True	AATAAA	-13	NA	44127476	44113693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_44114210_44116540_44116630_44127382
transcript_80978.nnic	chr6	-	638	2	NIC	ENSG00000180992.7	novel	957	3	NA	NA	-13	-243	combination_of_known_splicesites	FALSE	canonical	3	84	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-44114186	True	NA	-13	True	AATAAA	-13	NA	44127465	44113693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_44114210_44127343
transcript_80979.known	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	44216691	True	NA	14	True	AATAAA	-19	NA	44216925	44218234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44216969_44217449
transcript_80982.nic	chr6	+	2233	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_2	629.96147153719	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44201905	True	NA	79	True	AATAAA	-18	NA	44223554	44234142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_44223642_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_80983.nic	chr6	+	2230	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_2	614.014175963409	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44201905	True	NA	79	True	AATAAA	-18	NA	44223554	44234142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_80985.known	chr6	+	1998	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	536.370207972068	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	44218633	True	NA	100	True	NA	NA	NA	44219627	44233946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_80987.known	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_1	228.806990472076	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44201945	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_8100.known	chr1	-	1961	5	FSM	ENSG00000160781.17	ENST00000623241.3	1961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.62807315119618	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTCTTCTGGAGTTT	-156248077	False	NA	86	True	CATAAA	-23	NA	156248117	156243320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245781_156246251_156247956
transcript_81010.known	chr6	+	2283	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	694.769980240789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44218641	True	NA	79	True	AATAAA	-18	NA	44219635	44234142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81012.known	chr6	+	2582	12	FSM	ENSG00000096384.20	ENST00000353801.7	2582	12	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	4249.27429876158	2192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44164671	True	NA	33	True	AATAAA	-21	NA	44247086	44253883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44247196_44248616_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_81014.known	chr6	+	2674	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4279.49636528597	2180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44247852	False	NA	33	True	AATAAA	-21	NA	44247865	44253883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_81020.known	chr6	+	2555	12	FSM	ENSG00000096384.20	ENST00000371646.10	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	12779	junction_5	1192.07461356138	8750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44164685	True	NA	33	True	AATAAA	-21	NA	44247100	44253883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_81021.known	chr6	-	2063	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	156.603533378614	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	-44255938	False	NA	-13	True	ATTAAA	-18	NA	44257352	44254101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
transcript_81022.known	chr6	-	2022	4	FSM	ENSG00000157593.19	ENST00000393812.4	2022	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	10.3387082795139	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCCTGTGTTTTGGTT	-44255058	True	NA	-12	True	ATTAAA	-19	NA	44257528	44254100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257399
transcript_81023.known	chr6	-	4798	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_18	13.2526470209247	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	-44310695	True	NA	-20	True	AGTAAA	-14	NA	44313347	44298730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_81026.known	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_7	28.1862062403265	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	44386147	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
transcript_81029.nic	chr6	+	1086	7	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-163	44056	-163	-44056	5prime_fragment	FALSE	canonical	3	255	junction_3	20.6269780196281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAGAATCTGATTTA	44386480	True	NA	17	True	AAAAAG	-40	NA	44387542	44406369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322
transcript_81030.nic	chr6	+	1039	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-163	46398	-163	-46398	5prime_fragment	TRUE	canonical	3	255	junction_3	21.6554842938227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCCTTTCTGATTT	44386480	True	NA	7	True	NA	NA	NA	44387542	44404027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_81036.nnic	chr6	-	1093	3	NNC	ENSG00000196284.17	novel	1377	12	NA	NA	-3	39908	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	54.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTGTGGAATGGTCAG	-45376267	True	NA	NA	False	AATAAA	-32	NA	45377956	45211046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_45211850_45365200_45365302_45377767
transcript_81037.nic	chr6	-	472	3	NIC	ENSG00000196284.17	novel	396	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGTGTAGTCCCAGC	-45376267	True	NA	NA	False	AATAAA	-18	NA	45377956	45250954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_45251137_45365200_45365302_45377767
transcript_81040.known	chr6	+	4644	4	FSM	ENSG00000001561.7	ENST00000321037.5	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCACTGGTGATT	46129611	True	NA	4	True	AATAAA	-40	NA	46129988	46146688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_46130190_46139550_46140410_46141051_46141223_46143275
transcript_81042.known	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.7662997272851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-46169517	True	NA	-4	True	AATAAA	-23	NA	46170980	46159184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
transcript_81045.known	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.84754619472471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-46169508	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
transcript_81048.nic	chr6	-	1324	4	ISM	ENSG00000112796.10	ENST00000371383.7	3845	5	23	6131	14	-359	5prime_fragment	FALSE	canonical	3	14	junction_3	27.0102861065105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTTTATTGATTGA	-46169494	True	NA	-21	True	AATACA	-18	NA	46170957	46165315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_46165564_46167433_46168298_46170052_46170115_46170807
transcript_81049.nic	chr6	-	1868	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-5	4314	4	228	5prime_fragment	FALSE	canonical	3	62	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTTTTTACATACAG	-46169513	True	NA	NA	False	AAAAAG	-15	NA	46170976	46164728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_8105.known	chr1	-	4559	22	FSM	ENSG00000198952.8	ENST00000361813.5	4559	22	0	0	0	0	multi-exon	TRUE	canonical	3	430	junction_17	45.6462291026599	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-156271997	True	NA	-15	True	AATAAA	-15	NA	156282825	156249223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_81053.nic	chr6	-	868	2	ISM	ENSG00000112796.10	ENST00000371383.7	3845	5	23	10212	14	-4440	5prime_fragment	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTCTTCAGCTTAGGA	-46169494	True	NA	NA	False	NA	NA	NA	46170957	46169396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_46170115_46170807
transcript_81054.nic	chr6	-	595	3	ISM	ENSG00000172348.16	ENST00000330430.10	3188	4	76770	2319	76770	-2317	3prime_fragment	FALSE	canonical	3	30	junction_2	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTGTTTGGTTGTTT	NA	False	NA	-3	True	TTTAAA	-2	NA	46248898	46223054	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_46223302_46246747_46246920_46248722
transcript_81056.known	chr6	-	2432	12	FSM	ENSG00000146233.8	ENST00000275016.3	2432	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	2.86038776773678	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	-46652550	True	NA	NA	False	AATATA	-18	NA	46652818	46549579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46639493_46639669_46642162_46642299_46652405
transcript_81060.nnic	chr6	-	1450	11	NIC	ENSG00000146070.17	novel	1915	12	NA	NA	-15	-221	combination_of_known_splicesites	FALSE	canonical	3	17	junction_10	9.55196314900764	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCAAAACTGTCT	-46735012	True	NA	-14	True	ATTAAA	-16	NA	46735390	46704537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46735179
transcript_81062.known	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	-47477497	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_47477200_47477600
transcript_81067.known	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	28.2826753017147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-49461029	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
transcript_81070.nnic	chr6	-	3376	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-13	-383	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGTCCTTTATTGT	-49461042	True	NA	NA	False	AATAAA	-19	NA	49463266	49430742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81072.nnic	chr6	-	2838	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-13	-921	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGAGTGTATTTACGT	-49461042	True	NA	-4	True	AATAAA	-34	NA	49463266	49431280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81074.nnic	chr6	-	2695	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	38	-1013	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACTATTCCCATTTGT	-49460991	True	NA	-96	True	ATTAAA	-16	NA	49463215	49431372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81077.nnic	chr6	-	2592	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-13	-1167	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTAAAAACTCTCTATAC	-49461042	True	NA	NA	False	AATAAA	-8	NA	49463266	49431526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81080.nnic	chr6	+	1709	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-20	-71	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	29.4912592983074	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTATACTGTCTTGGG	49461560	True	NA	7	True	TATAAA	-18	NA	49463349	49493036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_81081.nnic	chr6	+	1780	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	29.4912592983074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	49461560	True	NA	78	True	AATAAA	-20	NA	49463349	49493107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_81082.known	chr6	+	1741	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	29.1794019815349	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	49461580	True	NA	78	True	AATAAA	-20	NA	49463369	49493107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_81086.nic	chr6	+	426	5	ISM	ENSG00000031691.7	ENST00000335783.4	1741	9	-15	20287	-15	-20287	5prime_fragment	FALSE	canonical	3	69	junction_1	39.4746754261514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATACAATACCATCT	49461565	True	NA	NA	False	ATTAAA	-7	NA	49463354	49472820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789
transcript_8109.nic	chr1	-	1481	6	NIC	ENSG00000198715.13	novel	1611	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	155.535976545621	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291620	False	NA	-1	True	AATAGA	-20	NA	156295696	156292687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156293210_156293319_156293430_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_81096.nic	chr6	-	3271	18	NIC	ENSG00000112118.20	novel	3208	17	NA	NA	-57	-5	combination_of_known_junctions	FALSE	canonical	3	170	junction_2	842.501005718496	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCTTAATAGTCATAG	-52250192	True	NA	-16	True	AATAAA	-18	NA	52284799	52264019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_52264787_52265234_52265386_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_81099.known	chr6	-	3068	17	FSM	ENSG00000112118.20	ENST00000596288.7	3068	17	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_6	184.466365074368	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-52250135	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_81107.known	chr6	-	3208	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_6	184.466365074368	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTCATAGTGTGTT	NA	False	NA	-10	True	AATAAA	-24	NA	52284881	52264013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_81112.known	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.38435587980495	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	52419594	True	NA	NA	False	AATAAA	-30	NA	52420341	52497198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81113.known	chr6	+	1829	10	FSM	ENSG00000096093.16	ENST00000636379.1	1829	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.4405515826241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGATTGGTGCCTTA	52419631	True	NA	92	True	ACTAAA	-14	NA	52420378	52492503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81114.known	chr6	+	2089	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.08147802758507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	52419566	True	NA	NA	False	CATAAA	-16	NA	52420313	52480139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
transcript_81115.known	chr6	+	1896	6	FSM	ENSG00000096093.16	ENST00000637200.1	1896	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	26.0415053328336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATATCAGTCATATAT	52419506	True	NA	NA	False	NA	NA	NA	52420253	52453543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52430227_52430375_52438303_52438592_52452687
transcript_81117.nic	chr6	+	1783	5	ISM	ENSG00000096093.16	ENST00000635866.1	2301	12	60	38762	0	81	5prime_fragment	FALSE	canonical	0	0	junction_3	27.3530162870569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTGTTTATATTATT	52419566	True	NA	NA	False	NA	NA	NA	52420313	52453637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_52420474_52423945_52424168_52429968_52430132_52438303_52438592_52452687
transcript_81120.known	chr6	+	3509	11	FSM	ENSG00000096093.16	ENST00000635911.1	3509	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.1226128655726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAGAGGCATTTACAGG	52419530	True	NA	-2	True	AATACA	-11	NA	52420277	52492409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423686_52423815_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81123.nnic	chr6	+	1425	4	NIC	ENSG00000096093.16	novel	2089	9	NA	NA	2	81	intron_retention	FALSE	canonical	0	0	junction_3	22.8375908439475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTGTTTATATTATT	52419545	True	NA	NA	False	NA	NA	NA	52420292	52453637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_52420474_52423945_52424168_52438303_52438376_52452687
transcript_81124.known	chr6	+	4004	10	FSM	ENSG00000096093.16	ENST00000637340.1	4004	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.08174763706845	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGATCTAAGATTGGT	NA	False	NA	86	True	ACTAAA	-8	NA	52419742	52492497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81125.known	chr6	+	3589	3	FSM	ENSG00000216775.4	ENST00000643631.2	3591	3	0	2	0	-2	multi-exon	FALSE	canonical	3	84	junction_2	19	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTATTTTATTTT	NA	False	NA	2	True	AATAAA	-16	NA	52664365	52669153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52665420_52666388_52666519_52666748
transcript_81126.known	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	52663885	True	NA	4	True	AATAAA	-18	NA	52664429	52669155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52665420_52666388
transcript_81129.known	chr6	+	988	5	FSM	ENSG00000096092.6	ENST00000211314.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	29.757352032733	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	52667794	True	NA	17	True	AATAAA	-18	NA	52671112	52686588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52671246_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_8113.nnic	chr1	-	1439	6	NNC	ENSG00000198715.13	novel	1611	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	199.372014084224	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291605	True	NA	-1	True	AATAGA	-20	NA	156295681	156292687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294675_156294760_156295525
transcript_81132.nnic	chr6	+	933	5	NNC	ENSG00000096092.6	novel	988	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	144.874730370759	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	52667779	True	NA	17	True	AATAAA	-18	NA	52671097	52686588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_52671176_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_81134.known	chr6	-	1240	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	17.410884207555	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993369	True	NA	-8	True	AATAAA	-17	NA	52995284	52977952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
transcript_81135.nnic	chr6	-	1408	7	NNC	ENSG00000170899.11	novel	1240	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_6	54.5374489074556	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993397	True	NA	-8	True	AATAAA	-17	NA	52995312	52977952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994402_52995248
transcript_81138.known	chr6	-	1127	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	60.8624679092131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993389	True	NA	-8	True	AATAAA	-17	NA	52995304	52977952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
transcript_8114.known	chr1	-	1611	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	66.1253355379011	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291603	True	NA	-1	True	AATAGA	-20	NA	156295679	156292687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_81143.known	chr6	+	1580	13	FSM	ENSG00000112146.17	ENST00000370939.7	1580	13	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	107.709356861675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTAAGTTATAAATGTG	53064937	False	NA	NA	False	ATTAAA	-18	NA	53064997	53097888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_53065209_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_81146.known	chr6	+	4743	13	FSM	ENSG00000112146.17	ENST00000323557.12	4743	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	89.5530568992483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCATACTTCTTGTAT	53062305	True	NA	6	True	AATAAA	-17	NA	53065403	53100873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_81152.known	chr6	-	3081	9	FSM	ENSG00000012660.14	ENST00000370918.8	3081	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	368.77074094212	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTTACATTTTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53349179	53267397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53287861_53287943_53291775_53291964_53295641_53295708_53348816
transcript_81157.known	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	49.5889223969406	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-53333954	True	NA	-17	True	ATTAAA	-14	NA	53348950	53267403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_81160.known	chr6	-	2875	7	FSM	ENSG00000012660.14	ENST00000542638.5	2875	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	321.627329200876	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTTACATTTTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53349179	53267397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53269271_53270592_53270728_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_81165.known	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	394.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	-53333930	True	NA	-5	True	AATAAA	-32	NA	53348926	53294087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53294492_53295641_53295708_53348816
transcript_81167.known	chr6	-	3785	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_14	16.9383194758709	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTGTGTGTGAGTT	-53543237	True	NA	-4	True	AATAAA	-28	NA	53545101	53497340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_81169.known	chr6	-	2289	16	FSM	ENSG00000001084.13	ENST00000643939.1	2289	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	54.5456383835286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGACTACCTGGGAC	-53544619	False	NA	-66	True	NA	NA	NA	53544633	53498386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516241_53520777_53520961_53522414_53522528_53544495
transcript_81170.known	chr6	-	1213	4	FSM	ENSG00000227885.3	ENST00000648812.1	1213	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTCAGCAGTTTTTTTT	-53793605	True	NA	NA	False	AATAAA	-1	NA	53793709	53745731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53793540
transcript_81171.known	chr6	-	514	4	FSM	ENSG00000227885.3	ENST00000662688.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	-53794238	False	NA	NA	False	AATAAA	-19	NA	53794319	53746408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53794172
transcript_81173.known	chr6	-	2449	9	FSM	ENSG00000146151.14	ENST00000274901.9	2449	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTGATTATGTTGCA	-55579171	False	NA	NA	False	AATAAA	-20	NA	55579192	55434372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_55435764_55439433_55439560_55495418_55495608_55499235_55499300_55514047_55514197_55516507_55516604_55541728_55541837_55542059_55542141_55578947
transcript_81174.known	chr6	-	4173	30	FSM	ENSG00000124749.17	ENST00000244728.10	4173	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	9.13278970524548	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-56247177	True	NA	NA	False	AATAAA	-18	NA	56247580	56056589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
transcript_81175.known	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	21.9544984001001	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	57044165	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
transcript_81179.known	chr6	+	2883	3	FSM	ENSG00000168116.14	ENST00000545356.5	2883	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_2	123.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTCATTTCCATATC	57045053	True	NA	38	True	AATAAA	-39	NA	57046531	57055239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57046777_57047312_57047397_57052685
transcript_81181.known	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	27.9884269085693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	57082201	True	NA	8	True	AGTAAA	-20	NA	57090187	57170305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_81182.known	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	67.9008152385461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	57089922	False	NA	14	True	ATTAAA	-17	NA	57090029	57170201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_8119.known	chr1	-	1365	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	159.73180647573	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_81193.known	chr6	+	3402	11	FSM	ENSG00000112200.17	ENST00000444273.6	3402	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	30.0601064535707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	57082126	True	NA	NA	False	NA	NA	NA	57090112	57151371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718
transcript_81194.known	chr6	+	2561	16	FSM	ENSG00000146143.19	ENST00000672107.1	2561	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	62.3397144683868	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314313	True	NA	12	True	AATAAA	-13	NA	57317629	57646850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57398004_57398123_57402128_57402269_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_81197.known	chr6	+	2303	14	FSM	ENSG00000146143.19	ENST00000615550.5	2303	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	23.5193487008805	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314313	True	NA	12	True	AATAAA	-13	NA	57317629	57646850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_81199.nnic	chr6	+	2187	12	NIC	ENSG00000146143.19	novel	2303	14	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	46.7380603041219	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314288	True	NA	12	True	AATAAA	-13	NA	57317604	57646850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_81200.nic	chr6	+	1242	11	NIC	ENSG00000146143.19	novel	2303	14	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	44.7660585711988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTCTTTTCTTGCC	57314288	True	NA	NA	False	ATTAAA	-16	NA	57317604	57587111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57586995
transcript_81204.known	chr6	+	2197	7	FSM	ENSG00000146143.19	ENST00000419977.4	2197	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	9.67815409397198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATGTGGGATGAAG	57314311	True	NA	NA	False	AAAAAG	-27	NA	57317627	57383589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030
transcript_81205.known	chr6	+	1266	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7598392985224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	57314313	True	NA	NA	False	AATAAA	-17	NA	57317629	57378976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
transcript_81206.known	chr6	+	864	5	FSM	ENSG00000146143.19	ENST00000274891.10	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAAGTGGTAGTTTCTT	57314307	True	NA	NA	False	AATAAA	-19	NA	57317623	57326363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924
transcript_81207.known	chr6	+	4628	6	FSM	ENSG00000285976.2	ENST00000370651.7	4628	6	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	46.2540809010405	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGATTTTATTTTCAG	63564065	True	NA	6	True	AATAAA	-17	NA	63572471	63583587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_63572720_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_81209.known	chr6	-	1404	1	FSM	ENSG00000266680.1	ENST00000584934.1	1404	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTAAAATCTTAAATTC	-63572189	False	NA	NA	False	AATAAA	-18	NA	63572408	63571004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_63571000_63572400
transcript_81210.known	chr6	+	2787	6	FSM	ENSG00000118482.12	ENST00000481385.6	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	23.9332404826425	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAGTTGAAAA	63632952	True	NA	13	True	NA	NA	NA	63635822	63698245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222
transcript_81216.known	chr6	-	1934	16	FSM	ENSG00000168216.13	ENST00000648743.1	1934	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	71.1710303111846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAATCATGCTATGTAA	-69794343	False	NA	-121	True	TTTAAA	-3	NA	69796608	69675972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796413
transcript_81217.known	chr6	-	3900	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	28.4498779532629	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGTGGCATTTTGT	-69794745	True	NA	NA	False	AATAAA	-19	NA	69797010	69674009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_8122.known	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_4	136.694001331441	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
transcript_81220.known	chr6	-	2957	33	FSM	ENSG00000112280.18	ENST00000683980.1	2957	33	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	21.7539507906035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAACATTACTTAACTA	-70282184	True	NA	-30	True	TATAAA	-44	NA	70283105	70216059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254739_70254770_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_81221.known	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	10.5700182667888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	-70282288	True	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_81232.nic	chr6	+	2108	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-130	77694	23	-21995	5prime_fragment	FALSE	canonical	3	89	junction_2	23.7445250349592	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	70407382	True	NA	NA	False	AATAAA	-21	NA	70413447	70482965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_81242.nnic	chr6	+	874	3	NNC	ENSG00000082269.17	novel	595	4	NA	NA	20	-8962	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	66.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTACCATCTCTTTT	70407379	True	NA	NA	False	AATAAA	-26	NA	70413444	70417809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70413703_70415290_70415377_70417279
transcript_81243.nic	chr6	+	1261	3	ISM	ENSG00000082269.17	ENST00000514185.5	529	5	567	795	0	778	internal_fragment	FALSE	canonical	3	44	junction_2	49	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATATTGTAAAACTAC	70407442	True	NA	NA	False	NA	NA	NA	70413507	70427549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70415290_70415377_70426569
transcript_81244.nnic	chr6	+	716	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	85.7139947085007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562176	True	NA	15	True	AATAAA	-16	NA	70566897	70589569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588711_70589209
transcript_81245.nnic	chr6	+	748	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562176	True	NA	15	True	AATAAA	-16	NA	70566897	70589569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588859_70589325
transcript_81246.nnic	chr6	+	722	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.7935904666301	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562176	True	NA	15	True	AATAAA	-16	NA	70566897	70589569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588884_70589376
transcript_81249.nnic	chr6	+	885	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562176	True	NA	15	True	AATAAA	-16	NA	70566897	70589569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588955_70589284
transcript_81250.nnic	chr6	+	917	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562176	True	NA	15	True	AATAAA	-16	NA	70566897	70589569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588980_70589277
transcript_81252.nnic	chr6	+	467	3	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-19	-3775	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	100.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACGGTAAATTCTGTA	70562176	True	NA	7	True	AATAAA	-20	NA	70566897	70585794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70585587
transcript_81253.known	chr6	+	1183	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	29.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562208	True	NA	15	True	AATAAA	-16	NA	70566929	70589569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70567005_70579413_70579567_70588614
transcript_81257.known	chr6	+	332	2	FSM	ENSG00000154079.6	ENST00000468640.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAATTTTATTTATTTA	70562195	True	NA	62	True	AATACA	-23	NA	70566916	70567659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70567005_70567415
transcript_81258.known	chr6	+	2403	10	FSM	ENSG00000112305.15	ENST00000316999.9	2403	10	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_8	33.996731869075	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTGTGGGTTT	70664220	True	NA	14	True	ATTAAA	-14	NA	70667775	70861166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_81261.nic	chr6	+	555	4	ISM	ENSG00000112305.15	ENST00000370452.7	2491	11	107	87741	0	-18344	5prime_fragment	FALSE	canonical	3	249	junction_1	13.9283882771841	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTC	70664327	True	NA	NA	False	GATAAA	-22	NA	70667882	70773425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349
transcript_81264.nic	chr6	-	1063	6	NIC	ENSG00000135314.13	novel	1430	5	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	14.2772546380598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	NA	False	NA	-3	True	AATAAA	-22	NA	73310425	73241313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551_73309729_73310305
transcript_81265.known	chr6	-	1430	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.75640815054393	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73310200	False	NA	-3	True	AATAAA	-22	NA	73310215	73241313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
transcript_81269.nnic	chr6	-	1281	4	NNC	ENSG00000135314.13	novel	2053	3	NA	NA	-12	274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5532267334343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTGTATTAGTCTGTTA	-73309228	True	NA	-3	True	AATAAA	-19	NA	73310155	73274771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_73275344_73275494_73275557_73291997_73292041_73309551
transcript_81270.nnic	chr6	-	1466	4	NNC	ENSG00000135314.13	novel	2053	3	NA	NA	-1	269	intron_retention	FALSE	canonical	0	0	junction_1	18.5532267334343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGCACTGTATTAGTC	-73310144	True	NA	-8	True	AATAAA	-14	NA	73310366	73274776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_73275323_73275494_73275557_73291997_73292041_73309551
transcript_81271.nic	chr6	-	1120	4	NIC	ENSG00000135314.13	novel	537	5	NA	NA	-60	269	intron_retention	FALSE	canonical	1	1	junction_3	18.1169043222683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGCACTGTATTAGTC	NA	False	NA	-8	True	AATAAA	-14	NA	73310425	73274776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_73275557_73291997_73292041_73309551_73309729_73310305
transcript_81272.known	chr6	-	2053	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGGCTATTATTGTC	-73309216	True	NA	NA	False	AATAAA	-12	NA	73310143	73274138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73275557_73291997_73292041_73309551
transcript_81273.nic	chr6	-	945	2	ISM	ENSG00000135314.13	ENST00000474593.1	537	5	-1	16865	-1	-16865	intron_retention	FALSE	canonical	3	45	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGAGGTGCATGTGCAG	-73310144	True	NA	NA	False	ATTAAA	-15	NA	73310366	73291910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_73292041_73309551
transcript_81274.known	chr6	-	1134	4	FSM	ENSG00000135314.13	ENST00000257765.9	1134	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	10.8012344973464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73263124	True	NA	-3	True	AATAAA	-22	NA	73263184	73241313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73262773
transcript_81275.known	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2.5	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-73353355	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73353379_73353852_73354033_73354113
transcript_81276.known	chr6	+	1037	3	FSM	ENSG00000203908.4	ENST00000370367.4	1037	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGTCTGTATTTTGGAA	73362622	True	NA	2	True	AATAAA	-14	NA	73362657	73364171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73362899_73363094_73363275_73363555
transcript_81278.known	chr6	+	2430	17	FSM	ENSG00000080007.8	ENST00000370336.5	2430	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.79843682124227	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGATAATTTGTCTTT	73394764	True	NA	NA	False	AATAAA	-24	NA	73394827	73417566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73395156_73397688_73397745_73400233_73400364_73401858_73401991_73404689_73404772_73405678_73405836_73406363_73406483_73407504_73407616_73407959_73408102_73409247_73409349_73412204_73412293_73413657_73413786_73413969_73414080_73414547_73414687_73415496_73415585_73416112_73416252_73417186
transcript_8128.known	chr1	+	975	4	FSM	ENSG00000163472.19	ENST00000357501.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.31816613336672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTCCACTCCCCGGC	156282740	True	NA	NA	False	NA	NA	NA	156282952	156291948	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156283066_156285183_156285268_156286259_156286474_156291384
transcript_81281.known	chr6	-	156	1	FSM	ENSG00000235174.1	ENST00000424573.1	156	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTGCACATGAGATGGC	-73373251	False	NA	NA	False	NA	NA	NA	73373263	73373107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73373100_73373300
transcript_81284.known	chr6	+	3987	13	FSM	ENSG00000135297.17	ENST00000680238.1	3987	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.9268653961751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_81286.known	chr6	+	10698	12	FSM	ENSG00000135297.17	ENST00000498286.6	10698	12	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	18.5374314195997	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTCTATTTCGCTTTA	73460223	True	NA	NA	False	AATAAA	-20	NA	73461736	73509236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_81288.known	chr6	+	4136	12	FSM	ENSG00000135297.17	ENST00000681284.1	4136	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	47.2401985986126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_81289.known	chr6	+	3618	12	FSM	ENSG00000135297.17	ENST00000680686.1	3618	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	51.5735853974086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_8129.known	chr1	+	2191	4	FSM	ENSG00000163472.19	ENST00000295694.9	2191	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	156282735	True	NA	13	True	AATAAA	-13	NA	156282947	156292443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156283066_156285183_156285984_156286259_156286474_156291384
transcript_81290.known	chr6	+	3616	11	FSM	ENSG00000135297.17	ENST00000681204.1	3616	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	60.9476004449724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAAGCCTGTAGTCCCA	73460217	True	NA	NA	False	ACTAAA	-26	NA	73461730	73502309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73500573
transcript_81292.known	chr6	+	2240	11	FSM	ENSG00000135297.17	ENST00000415228.5	2240	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	62.9081870665496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTTTTGAGAGTTAATA	73460251	True	NA	7	True	ATTAAA	-15	NA	73461764	73501096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_81293.known	chr6	+	2116	11	FSM	ENSG00000135297.17	ENST00000521156.6	2116	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	76.1955379270991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCGTGTTTTGAGAGTT	73460223	True	NA	3	True	ATTAAA	-11	NA	73461736	73501092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73500573
transcript_81294.known	chr6	+	3328	11	FSM	ENSG00000135297.17	ENST00000680609.1	3328	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	76.4950325184583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_81297.known	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	7798.01575493957	38579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520069	False	NA	-1	True	ATTAAA	-17	NA	73520214	73517514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
transcript_81299.known	chr6	-	3694	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_7	7701.15345190549	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCTTTAAGATGA	-73520446	False	NA	-19	True	AATAAA	-3	NA	73520591	73515764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
transcript_8130.nic	chr1	-	1132	4	NIC	ENSG00000198715.13	novel	1365	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	193.046338708842	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	NA	False	NA	0	True	AATAGA	-21	NA	156295714	156292686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156293210_156294017_156294237_156294364_156294566_156295525
transcript_81300.known	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	7801.33535926735	38571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520840	False	NA	-1	True	ATTAAA	-17	NA	73520985	73517514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
transcript_81301.known	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_7	7601.45137860031	38859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73521695	False	NA	-1	True	ATTAAA	-17	NA	73521840	73517514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
transcript_81305.known	chr6	-	1731	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7983.23340712603	84479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAACCTGTGTGTTCCT	-73503429	True	NA	-8	True	ATTAAA	-10	NA	73521032	73517521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
transcript_81306.known	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3343.83933110163	38330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73503429	True	NA	-1	True	ATTAAA	-17	NA	73521032	73517514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_81307.known	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3959.88425756781	38071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503428	True	NA	-5	True	ATTAAA	-13	NA	73521031	73517518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
transcript_81308.known	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3950.98728871096	38087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	-73503429	True	NA	-7	True	ATTAAA	-11	NA	73521032	73517520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
transcript_81309.known	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3818.71184287174	38217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503429	True	NA	-5	True	ATTAAA	-13	NA	73521032	73517518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
transcript_81311.known	chr6	-	3292	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	13.3626344707921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-73652905	True	NA	-12	True	AATAAA	-15	NA	73653992	73593378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_81313.nnic	chr6	-	1060	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	2	12553	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	28.4004107951511	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACAGGACCTTCCAAT	-73652903	True	NA	-10	True	AATAAA	-22	NA	73653990	73622679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_81315.known	chr6	+	9031	33	FSM	ENSG00000156535.15	ENST00000287097.6	9031	33	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	6.18647403110205	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTATGTGTTCTTTTTA	73695449	True	NA	6	True	AATAAA	-19	NA	73696202	73828313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73696290_73697399_73697573_73723250_73723280_73730343_73730575_73736382_73736509_73756642_73756683_73758943_73759029_73762383_73762481_73762740_73762883_73763575_73763686_73765929_73766155_73766758_73766861_73766947_73767011_73768054_73768232_73771428_73771582_73780423_73780499_73781258_73781320_73782613_73782756_73783706_73783825_73785363_73785478_73787233_73787453_73788467_73788613_73792625_73792803_73803219_73803302_73806843_73807073_73808082_73808249_73809983_73810175_73810991_73811148_73812204_73812271_73814980_73815124_73818387_73818536_73820460_73820564_73823457
transcript_81320.known	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3274.23276848519	5695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205787	True	NA	-15	True	AATAAA	-16	NA	75243801	75237786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
transcript_81321.known	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	3012.52728894971	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205773	True	NA	-15	True	AATAAA	-16	NA	75243787	75237786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
transcript_81322.known	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	2978	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	-75205771	True	NA	-51	True	GATAAA	-40	NA	75243785	75237822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75241175_75241266_75243716
transcript_81323.known	chr6	-	357	3	FSM	ENSG00000112695.13	ENST00000460985.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3448.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTCTGATTTTATCA	-75205774	True	NA	-17	True	AATAAA	-14	NA	75243788	75237788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75240300_75240386_75243716
transcript_81324.known	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	TRUE	canonical	3	712	junction_6	64.6411031946564	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-75272647	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
transcript_81327.known	chr6	-	2791	6	FSM	ENSG00000112697.17	ENST00000475111.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	323.797714630601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAATGTAATGGTT	NA	False	NA	NA	False	AATATA	-17	NA	75284948	75254598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75284401
transcript_81330.known	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	-75334655	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75308898_75312396_75315203_75334642
transcript_81336.known	chr6	+	4644	23	FSM	ENSG00000112701.18	ENST00000370010.6	4644	23	0	0	0	0	multi-exon	TRUE	canonical	2	63	junction_5	98.293339441248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	16	True	AATAAA	-19	NA	75601508	75715904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_81338.known	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	2	173	junction_5	81.167543589326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	75598343	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_81339.known	chr6	+	8642	36	FSM	ENSG00000196586.17	ENST00000664640.1	8642	36	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_33	62.8809954742825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	75744515	True	NA	10	True	AATAAA	-25	NA	75749238	75919537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75894813_75894841_75895230_75895261_75898372_75898412_75907604_75907709_75908495_75908628_75911671_75911699_75914062_75914282_75914812
transcript_81340.known	chr6	+	3122	28	FSM	ENSG00000196586.17	ENST00000627432.3	3122	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.8104684460171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCAAAGAGAAAACAA	75744512	True	NA	5	True	NA	NA	NA	75749235	75891238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227
transcript_81343.known	chr6	+	627	2	FSM	ENSG00000280511.1	ENST00000626131.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGACTCTCTTTTCGG	76557139	True	NA	-50	True	TATAAA	-21	NA	76561327	76562590	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_76561668_76562303
transcript_81344.nnic	chr6	-	2976	24	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-36	-42419	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	63.3766906278155	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAAGTAAATG	-79071861	True	NA	NA	False	ATTAAA	-3	NA	79078290	78982964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79004372_79004437_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_81345.nic	chr6	-	2976	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-36	48482	-36	-42355	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACAAAAGGTTTG	-79071861	True	NA	NA	False	AAAAAG	-36	NA	79078290	78982900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_81347.nic	chr6	-	2912	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-36	48546	-36	-42419	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAAGTAAATG	-79071861	True	NA	NA	False	ATTAAA	-3	NA	79078290	78982964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_8135.known	chr1	-	543	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGCTGCAGTGTGTT	-156287474	False	NA	-7	True	TATAAA	-17	NA	156291550	156290095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156290361_156290976_156291107_156291402
transcript_81354.nic	chr6	-	666	4	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-36	142774	-36	-136647	5prime_fragment	FALSE	canonical	3	213	junction_3	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGTGCAGTGCAAGGC	-79071861	True	NA	-23	True	AATAAA	-12	NA	79078290	79077192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_79077508_79077699_79077730_79077854_79077914_79078028
transcript_81356.known	chr6	+	5577	4	FSM	ENSG00000146243.14	ENST00000369940.7	5577	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	78866561	True	NA	5	True	AATGAA	-18	NA	78867550	78903102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_78867892_78885377_78885444_78897828_78897960_78898063
transcript_81358.nnic	chr6	+	676	4	NNC	ENSG00000146243.14	novel	5577	4	NA	NA	250	-4791	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	19.4307888557196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAGAAAAAAGCACCT	78867845	False	NA	NA	False	AATACA	-44	NA	78867856	78898310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_78868089_78885377_78885444_78897828_78897960_78898063
transcript_8136.known	chr1	+	2155	4	FSM	ENSG00000163472.19	ENST00000405535.3	2155	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.23609564462324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	156284290	True	NA	13	True	AATAAA	-13	NA	156284324	156292443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156284407_156285183_156285984_156286259_156286474_156291384
transcript_81360.known	chr6	+	2229	2	FSM	ENSG00000286340.2	ENST00000669651.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAAATTCATCACTTT	79078510	True	NA	NA	False	TATAAA	-5	NA	79078576	79081371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_79078871_79079436
transcript_81376.known	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1912	junction_1	1194.79052557342	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_81381.known	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	779.148098887497	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_81392.nic	chr6	-	1450	5	NIC	ENSG00000118418.14	novel	872	6	NA	NA	20	0	intron_retention	FALSE	canonical	3	4603	junction_3	161.742078631382	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191915	True	NA	-6	True	AATAAA	-21	NA	79234718	79201244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_81399.known	chr6	-	1010	7	FSM	ENSG00000118418.14	ENST00000620514.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2284.81884159092	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTGACTCTTAGTA	-79191935	True	NA	-10	True	AATAAA	-17	NA	79234738	79201248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79201727_79202062_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_81404.known	chr6	+	1422	2	FSM	ENSG00000287811.2	ENST00000671258.1	1422	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCTAACTTCTTGA	79537518	False	NA	NA	False	NA	NA	NA	79537539	79539976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_79537713_79538727
transcript_81405.known	chr6	+	4603	4	FSM	ENSG00000198478.8	ENST00000369838.6	4603	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	11.4697670227235	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCTGTCACCTCC	79628711	True	NA	13	True	AATAAA	-16	NA	79631328	79703655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_79631507_79673613_79673800_79696484_79696566_79699497
transcript_81408.known	chr6	-	3013	6	FSM	ENSG00000118402.6	ENST00000369816.5	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	13.1209755734854	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTTTTTTGTTAAT	-79946259	True	NA	-4	True	AATAAA	-23	NA	79947553	79914813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79916884_79919419_79919548_79921624_79921797_79924951_79925033_79926193_79926382_79947179
transcript_81413.known	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	34.3235901900925	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	79998907	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_81415.known	chr6	+	3477	22	FSM	ENSG00000112742.10	ENST00000230510.7	3477	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	99.9802928427202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	NA	False	NA	25	True	AATAAA	-30	NA	80004146	80042527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80004714_80005829_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026380_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_81418.known	chr6	+	3725	22	FSM	ENSG00000112742.10	ENST00000509894.5	3725	22	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_11	73.3806588171255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	NA	False	NA	25	True	AATAAA	-30	NA	80003886	80042527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026380_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_81426.known	chr6	+	1514	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_10	48.027179804773	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	80100700	True	NA	-13	True	AATAAA	-1	NA	80106646	80346254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
transcript_81433.known	chr6	+	3668	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	24.9923445068809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	80100724	True	NA	3	True	AATAAA	-17	NA	80106670	80346270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
transcript_81439.known	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_25	16.8436689492957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-82246171	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_81441.nic	chr6	-	2691	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-20	22979	-20	-22979	5prime_fragment	FALSE	canonical	3	61	junction_8	10.3787768192819	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAATATTAGGGAAGA	-82246201	True	NA	NA	False	NA	NA	NA	82247774	82214309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_81443.nnic	chr6	+	1696	3	NNC	ENSG00000146242.9	novel	3392	3	NA	NA	-17	-488	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	108	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTGTGTGCAAGTTTG	82362065	True	NA	NA	False	AATAAA	-15	NA	82363799	82366929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_82363909_82364622_82364736_82365455
transcript_81447.known	chr6	-	1352	11	FSM	ENSG00000118420.17	ENST00000430071.6	1352	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	43.9881802306029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATTAGAGCTGGGCAT	-83062911	True	NA	NA	False	NA	NA	NA	83065839	82893024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83049708_83049773_83054147_83054239_83057825_83058023_83065641
transcript_81448.nic	chr6	-	1929	11	NIC	ENSG00000118420.17	novel	1352	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	42.4246390674099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATGTTTCTTTTGTTA	-83062901	True	NA	0	True	ATTAAA	-21	NA	83065829	82892466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83063152_83063246_83065641
transcript_81450.known	chr6	-	1925	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	11.4255507471869	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	-83062913	True	NA	0	True	AATAAA	-24	NA	83065841	82892389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_81455.nnic	chr6	-	1213	5	NIC	ENSG00000118420.17	novel	1925	10	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	50.2114279820839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATGTTTCTTTTGTTA	-83062923	True	NA	0	True	ATTAAA	-21	NA	83065851	82892466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_82893043_82957311_82957451_83054147_83054239_83057825_83058023_83065641
transcript_81457.nic	chr6	-	775	4	ISM	ENSG00000118420.17	ENST00000509102.5	1246	10	-100	151430	-10	-8357	5prime_fragment	FALSE	canonical	3	89	junction_1	14.8174071805952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGACTTCTTCAATCT	-83062923	True	NA	-1	True	AATAAA	-23	NA	83065851	83044382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_83044660_83054147_83054239_83057825_83058023_83065641
transcript_8146.known	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	1357.05872859547	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	-156283761	True	NA	NA	False	NA	NA	NA	156338257	156309164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
transcript_81460.known	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	40.239560412885	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-83185144	True	NA	0	True	AATAAA	-21	NA	83193265	83164872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_81462.known	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	128.85036541146	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-83185147	True	NA	-1	True	ATTAAA	-22	NA	83193268	83169520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_81465.known	chr6	-	1866	12	FSM	ENSG00000013375.16	ENST00000651425.1	1866	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	138.807911747264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATCTTTGCCATCACC	-83185167	True	NA	-3	True	ATTAAA	-19	NA	83193288	83168902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
transcript_81466.known	chr6	-	1893	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	136.160636779741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATCTTATTACCAAC	-83185136	True	NA	-28	True	NA	NA	NA	83193257	83168927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_81473.nic	chr6	-	1475	10	ISM	ENSG00000013375.16	ENST00000509219.2	1952	13	-36	4748	-11	168	5prime_fragment	FALSE	canonical	3	381	junction_2	43.9851265546058	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGCTTCCTTCTAATA	-83185183	True	NA	NA	False	ATTAAA	-17	NA	83193304	83174268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_81474.known	chr6	-	561	5	FSM	ENSG00000013375.16	ENST00000505470.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	208.103790210558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACATGGTGTATTGTCG	-83185134	True	NA	NA	False	NA	NA	NA	83193255	83182949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83182979_83187007_83187076_83188613_83188795_83190808_83191015_83193178
transcript_81476.nnic	chr6	+	1471	4	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-23	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	28.2488937836511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	83191914	True	NA	7	True	AATAAA	-15	NA	83193333	83196537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_83193444_83194311_83194653_83195194_83195272_83195594
transcript_81479.known	chr6	+	3769	3	FSM	ENSG00000013392.8	ENST00000369724.5	3769	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTTTTCATTCC	83191937	True	NA	19	True	AGTAAA	-20	NA	83193356	83198935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83193444_83194311_83194653_83195594
transcript_81480.nnic	chr6	+	1167	3	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-15	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	83191922	True	NA	7	True	AATAAA	-15	NA	83193341	83196537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_83193444_83194530_83194653_83195594
transcript_81482.known	chr6	-	3338	14	FSM	ENSG00000065833.9	ENST00000369705.4	3338	14	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	9.09385643454255	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCTTAAAATGTTACA	-83430353	True	NA	-9	True	AATAAA	-18	NA	83431051	83210401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83212095_83216497_83216597_83223759_83223934_83227334_83227478_83228825_83228932_83237716_83237831_83239538_83239637_83253628_83253739_83315309_83315414_83346172_83346335_83352063_83352140_83398366_83398517_83407767_83407902_83430876
transcript_81486.known	chr6	+	2444	2	FSM	ENSG00000146250.7	ENST00000369700.4	2444	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTCTGGTTATTTTCC	83512081	True	NA	10	True	AATAAA	-22	NA	83512533	83525704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83512695_83523421
transcript_81487.known	chr6	+	664	4	FSM	ENSG00000203877.9	ENST00000369689.6	570	4	-94	0	-94	0	multi-exon	FALSE	canonical	3	8	junction_1	7.78888096369861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	83853227	True	NA	NA	False	AATAAA	-17	NA	83853265	83857515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83853512_83853694_83853774_83854096_83854162_83857241
transcript_81488.known	chr6	+	521	3	FSM	ENSG00000203877.9	ENST00000369687.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	83853502	True	NA	NA	False	AATAAA	-17	NA	83853591	83857515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83853774_83854096_83854162_83857241
transcript_81489.known	chr6	-	1856	1	FSM	ENSG00000287705.1	ENST00000656981.1	1856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATTGTAAACTATAGT	-83854144	True	NA	NA	False	AATAAA	-33	NA	83854167	83852311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83852300_83854200
transcript_81493.nnic	chr6	+	2445	17	NNC	ENSG00000065615.14	novel	9205	16	NA	NA	-7	5052	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	39.8045517968737	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGGTAGAAATGTGG	83857178	True	NA	14	True	AATAAA	-23	NA	83859648	83960427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83926135_83926332_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_81496.known	chr6	+	9205	16	FSM	ENSG00000065615.14	ENST00000369681.10	9205	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	14.35208076281	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTCTGTATTTT	83857218	True	NA	3	True	AATAAA	-15	NA	83859688	83967423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_81506.nnic	chr6	+	2192	4	NNC	ENSG00000135324.6	novel	2137	4	NA	NA	-568	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.0485374896143	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	84033174	True	NA	4	True	AATAAA	-15	NA	84033203	84090881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_84033371_84055311_84055446_84062892_84062993_84089090
transcript_81507.known	chr6	+	2137	4	FSM	ENSG00000135324.6	ENST00000257776.5	2137	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	84033246	True	NA	4	True	AATAAA	-15	NA	84033771	84090881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_84033884_84055311_84055446_84062892_84062993_84089090
transcript_81510.known	chr6	+	974	3	FSM	ENSG00000135318.12	ENST00000369646.7	974	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTACTAAGAATTTATTGA	85450057	False	NA	NA	False	ATTAAA	-26	NA	85450090	85471599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_85450479_85467059_85467283_85471236
transcript_81511.known	chr6	-	3576	30	FSM	ENSG00000135317.14	ENST00000684717.1	3576	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	69.068922478338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85593882	False	NA	NA	False	TATAAA	-1	NA	85593897	85505527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85521568_85521686_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_81512.known	chr6	-	3427	29	FSM	ENSG00000135317.14	ENST00000684118.1	3427	29	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	63.2269458670389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85593886	False	NA	NA	False	TATAAA	-1	NA	85593901	85505527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507257_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_81513.known	chr6	-	3412	29	FSM	ENSG00000135317.14	ENST00000684581.1	3412	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	65.7476138311482	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85592176	True	NA	NA	False	TATAAA	-1	NA	85593857	85505527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517872_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_81514.known	chr6	-	3193	29	FSM	ENSG00000135317.14	ENST00000505648.5	3193	29	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_28	50.6366986986913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	-85594122	True	NA	-11	True	AATAAA	-31	NA	85594156	85505797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_81515.known	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	45.9132300253209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	-85592169	True	NA	-15	True	AATAAA	-27	NA	85593850	85505801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_81516.known	chr6	-	3821	27	FSM	ENSG00000135317.14	ENST00000684647.1	3821	27	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_25	69.3494815533323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATAGGTAAACTGGAAA	-85593882	False	NA	NA	False	TTTAAA	-32	NA	85593897	85504775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572372_85574257_85574379_85593833
transcript_81517.known	chr6	-	3500	26	FSM	ENSG00000135317.14	ENST00000683195.1	3500	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	68.380862819944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85592196	True	NA	NA	False	NA	NA	NA	85593877	85504994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_81518.known	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_22	58.1766138581475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	-85593898	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_81520.known	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	283.999185192639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85642963	False	NA	-27	True	AATAAA	-17	NA	85642978	85608334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_81525.known	chr6	-	2158	12	FSM	ENSG00000135316.19	ENST00000676542.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	316.77734183101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGATTTTTCCCCT	-85642963	False	NA	-16	True	AATAAA	-26	NA	85642978	85612568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612924_85615018_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_81528.known	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	365.932252231394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85641637	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_81530.known	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_10	290.868630140825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	-85642907	False	35266	-1	True	AATAAA	-21	NA	85642922	85607778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_81534.known	chr6	-	3314	11	FSM	ENSG00000135316.19	ENST00000676630.1	3314	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_7	335.471742476173	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	-85642948	False	35266	-12	True	AATAAA	-16	NA	85642963	85611321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_81537.known	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_10	138.500685918879	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	-85642871	False	NA	NA	False	AATAAA	-20	NA	85642886	85613975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_81538.known	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	294.129580287328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85641664	True	NA	40	True	AATAAA	-28	NA	85643867	85614205	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_81542.known	chr6	-	3098	10	FSM	ENSG00000135316.19	ENST00000678618.1	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	320.069591198346	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	-85642909	False	35266	-12	True	AATAAA	-16	NA	85642924	85611321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_81543.known	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	286.441686048265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	-85642996	False	NA	NA	False	AATAAA	-17	NA	85643011	85613384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_81545.nic	chr6	-	1812	10	ISM	ENSG00000135316.19	ENST00000369622.8	2754	11	-473	4885	-348	-4133	5prime_fragment	FALSE	canonical	3	688	junction_9	135.538523520159	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAAAGCTCAG	-85643344	False	NA	7	True	NA	NA	NA	85643359	85618860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_8155.known	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3511	junction_10	243.134389507011	6501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-156283796	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_81550.nic	chr6	-	1618	9	ISM	ENSG00000135316.19	ENST00000678899.1	3310	10	-314	5476	-314	-4133	5prime_fragment	FALSE	canonical	3	190	junction_8	295.050392941613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAAAGCTCAG	-85608059	True	NA	7	True	NA	NA	NA	85643325	85618860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_81552.known	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	2713.18636293197	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
transcript_81554.known	chr6	-	638	6	FSM	ENSG00000203875.13	ENST00000667622.1	638	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2721.83122180638	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATGTTCCTTTTTG	-85678738	False	NA	-17	True	AATAAA	-11	NA	85678748	85677086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678497
transcript_81555.known	chr6	-	451	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	2648.09614629076	3292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
transcript_81556.known	chr6	-	600	5	FSM	ENSG00000203875.13	ENST00000664198.1	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1320.31634466896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	-85678738	False	NA	-16	True	ATTAAA	-16	NA	85678748	85677006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85678033_85678135_85678189_85678693
transcript_81557.known	chr6	-	934	5	FSM	ENSG00000203875.13	ENST00000369605.9	934	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3021.86287743173	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85586089	True	NA	-12	True	AATAAA	-16	NA	85678732	85677081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677186_85677419_85677493_85677794_85677876_85677953_85678033_85678135
transcript_81558.known	chr6	-	553	5	FSM	ENSG00000203875.13	ENST00000667545.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1073.88369365588	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678189_85678693
transcript_81559.known	chr6	-	866	4	FSM	ENSG00000203875.13	ENST00000428833.6	866	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3484.71063679931	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-85678738	False	NA	-15	True	AATAAA	-13	NA	85678748	85677084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677186_85677419_85677493_85677953_85678033_85678135
transcript_81560.known	chr6	-	823	4	FSM	ENSG00000203875.13	ENST00000427501.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	3189.41649139079	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678697
transcript_81561.known	chr6	-	456	6	FSM	ENSG00000203875.13	ENST00000623001.4	456	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2691.50778561014	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-85586093	True	NA	-15	True	AATAAA	-13	NA	85678736	85677084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677900_85677953_85678033_85678135_85678189_85678693
transcript_81562.known	chr6	-	750	5	FSM	ENSG00000203875.13	ENST00000668512.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1303.79587646993	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTTTTTGTTATTA	-85678738	False	NA	-11	True	AATAAA	-17	NA	85678748	85677080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135_85678189_85678693
transcript_81563.known	chr6	-	279	4	FSM	ENSG00000203875.13	ENST00000660949.1	279	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2778.10754931402	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATGTTCCTTTTTGT	-85678738	False	NA	-16	True	AATAAA	-12	NA	85678748	85677085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678697
transcript_81564.known	chr6	-	1008	4	FSM	ENSG00000203875.13	ENST00000670327.1	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3227.74730526828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-85586093	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677790_85678033_85678135
transcript_81565.known	chr6	-	1258	4	FSM	ENSG00000203875.13	ENST00000657398.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_1	655.77045441899	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTTTGTTATTACTT	-85678738	False	NA	-8	True	AATAAA	-20	NA	85678748	85677077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135
transcript_81566.known	chr6	-	1640	2	FSM	ENSG00000203875.13	ENST00000668505.1	1640	2	0	0	0	0	multi-exon	FALSE	canonical	3	7567	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTTGTAATCAAATTAC	-85678738	False	NA	-15	True	ATTAAA	-17	NA	85678748	85677005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85678033_85678135
transcript_81567.known	chr6	+	12341	8	FSM	ENSG00000188994.13	ENST00000369577.8	12341	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	8.17412542909712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCTTTAAACATTC	87150605	True	NA	25	True	ATTAAA	-33	NA	87155564	87265943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
transcript_81568.known	chr6	+	770	3	FSM	ENSG00000188994.13	ENST00000496806.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTTAGAAAACAAGAATG	87150661	True	NA	49	True	AATAAA	-31	NA	87155620	87260645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87155760_87215902_87215963_87260074
transcript_81576.known	chr6	+	2405	3	FSM	ENSG00000111850.11	ENST00000229570.9	2405	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	34.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGATTCTGAACATT	87319131	True	NA	7	True	AATAAA	-15	NA	87322592	87342322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87322633_87337008_87337167_87340115
transcript_81582.known	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	10	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	-87328990	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_87284940_87322865_87323044_87329137
transcript_81584.nic	chr6	+	379	2	ISM	ENSG00000111850.11	ENST00000608525.5	735	3	-45	4460	-19	-3186	5prime_fragment	FALSE	canonical	3	232	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTTTCACATATAAATA	87319102	True	NA	NA	False	AATAAA	-25	NA	87322563	87337318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_87322633_87337008
transcript_81590.nnic	chr6	+	1901	9	NNC	ENSG00000164414.19	novel	1854	8	NA	NA	3	-66	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	36.7525509318741	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGTGAAATTTCAGTG	87472103	True	NA	13	True	AATAAA	-26	NA	87472927	87512264	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_87473020_87477361_87477540_87499093_87499167_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_81594.nnic	chr6	+	1770	8	NNC	ENSG00000164414.19	novel	1854	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	28.2076845804074	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	87472103	True	NA	85	True	AATAAA	-17	NA	87472927	87512336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508467_87509040_87509176_87511398
transcript_81595.known	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	5.8970764115858	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	87472149	True	NA	85	True	AATAAA	-17	NA	87472973	87512336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_81598.known	chr6	+	1720	7	FSM	ENSG00000164414.19	ENST00000369556.7	1720	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	33.0424810744526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAATTGTTTAATCA	87472100	True	NA	79	True	AATAAA	-11	NA	87472924	87512330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87509040_87509176_87511398
transcript_81617.nnic	chr6	-	1997	20	ISM	ENSG00000146282.19	ENST00000693431.1	2361	21	22	461	0	4	5prime_fragment	FALSE	canonical	3	234	junction_19	87.8085931470885	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-87583438	True	NA	-33	True	AATGAA	-41	NA	87589990	87514406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_81618.known	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	TRUE	canonical	3	399	junction_19	60.3226780304434	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-87583435	True	NA	-5	True	AATAAA	-14	NA	87589987	87513937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_81629.nnic	chr6	-	1941	19	FSM	ENSG00000146282.19	ENST00000693327.1	2388	19	-3	450	0	4	multi-exon	FALSE	canonical	3	35	junction_14	147.241854036979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-87583438	True	NA	-33	True	AATGAA	-41	NA	87589990	87514406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_81651.nnic	chr6	+	2597	21	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	176.597812840363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584055	True	NA	16	True	AATAAA	-23	NA	87590122	87667451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_81656.known	chr6	+	2501	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	128.498164941573	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584067	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_81658.known	chr6	+	2498	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_14	105.424192611618	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584067	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_81664.nic	chr6	+	2203	19	ISM	ENSG00000135336.16	ENST00000392844.8	2498	20	-77	1556	-9	-1556	5prime_fragment	FALSE	canonical	3	346	junction_14	108.224803186198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGTCTACACTAGATAT	87583990	True	NA	2	True	CATAAA	-19	NA	87590057	87665895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753
transcript_81679.nnic	chr6	+	439	5	NIC	ENSG00000135336.16	novel	2035	15	NA	NA	-9	-6021	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	347.196180134517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCTTGTTCTTGGT	87584053	True	NA	4	True	AATAAA	-18	NA	87590120	87603510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383
transcript_81685.known	chr6	+	471	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	388.868443907019	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	87584062	True	NA	3	True	AATAAA	-17	NA	87590129	87595437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
transcript_81688.nnic	chr6	+	465	4	NNC	ENSG00000135336.16	novel	471	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	404.943891861028	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	87584053	True	NA	3	True	AATAAA	-17	NA	87590120	87595437	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_87590193_87594352_87594408_87594541_87594614_87595171
transcript_81689.nic	chr6	+	415	4	ISM	ENSG00000135336.16	ENST00000681069.1	2035	15	-78	53878	-9	-6021	5prime_fragment	FALSE	canonical	3	633	junction_3	131.780963049381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCTTGTTCTTGGT	87583990	True	NA	4	True	AATAAA	-18	NA	87590057	87603510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383
transcript_81692.known	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_5	29.1575033224726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-88957525	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_81699.known	chr6	-	2017	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	31.2434608542947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGAAT	-88957468	True	NA	NA	False	NA	NA	NA	88963561	88677993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_8170.known	chr1	-	1885	13	FSM	ENSG00000163468.15	ENST00000368258.7	1885	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1074.13268306729	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	-156283767	True	NA	-22	True	ATTAAA	-14	NA	156338263	156308968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156338153
transcript_81700.nic	chr6	-	1424	2	ISM	ENSG00000111880.16	ENST00000538899.2	1374	12	-246	170297	-37	-170297	5prime_fragment	FALSE	canonical	3	227	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAACTGGGGCTGGGATG	NA	False	NA	NA	False	AAAAAG	-18	NA	88963655	88940066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_88941181_88963345
transcript_81701.nnic	chr6	+	1511	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-65	-322	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	89081701	False	NA	18	True	TTTAAA	-31	NA	89081770	89084838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_89082011_89082550_89082736_89083752
transcript_81702.nnic	chr6	+	1650	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-44	-322	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	16	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	89081598	True	NA	18	True	TTTAAA	-31	NA	89081791	89084838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_89082166_89082545_89082736_89083752
transcript_81703.known	chr6	-	3589	5	FSM	ENSG00000154548.9	ENST00000452027.3	3589	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	36.8264510915727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGTGATCAGTTCTT	-89117173	True	NA	-1	True	AATAAA	-19	NA	89118071	89095958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89098948_89105118_89105261_89105426_89105531_89107153_89107259_89117822
transcript_81707.known	chr6	-	4164	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	14.6747040438814	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTTTGACCAAAGGT	-89352657	False	2077	-5	True	AATAAA	-20	NA	89352722	89326624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_81710.known	chr6	-	4923	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	19.2353840616713	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTACATCTCCACAT	-89412253	False	NA	21	True	GATAAA	-39	NA	89412273	89364615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
transcript_81713.known	chr6	-	2835	3	FSM	ENSG00000083099.11	ENST00000517396.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAAAGTGCC	-89638354	False	NA	NA	False	NA	NA	NA	89638401	89634806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637724_89637883_89638271
transcript_81714.known	chr6	-	677	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	124.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGTTCAAGACCAG	-89636109	True	NA	NA	False	NA	NA	NA	89638749	89636912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637724_89637883_89638671
transcript_81716.known	chr6	-	608	3	FSM	ENSG00000083099.11	ENST00000523075.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	106.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTAACAAATGGCCAGTA	-89638385	False	NA	17	True	AAGAAA	-5	NA	89638432	89637047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637741_89637883_89638271
transcript_81717.known	chr6	-	721	3	FSM	ENSG00000083099.11	ENST00000524153.5	721	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	109.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAATTAGCTTGGTG	-89638439	False	NA	NA	False	ACTAAA	-2	NA	89638486	89636856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637741_89637883_89638403
transcript_81718.known	chr6	-	5347	3	FSM	ENSG00000083099.11	ENST00000523377.2	5347	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	36	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCATTTTATTACAA	-89636107	True	NA	2	True	AATAAA	-23	NA	89638747	89632223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637741_89637883_89638671
transcript_81720.known	chr6	-	565	3	FSM	ENSG00000083099.11	ENST00000521961.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGACACAATCATTAG	-89638436	False	2640	38	True	AAGAAA	-26	NA	89638483	89637026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637724_89637883_89638403
transcript_81731.nnic	chr6	+	624	2	Antisense	novelGene_ENSG00000112159.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAACAAACAGAATGGGT	89683411	True	NA	NA	False	AATAAA	-29	NA	89721153	89721816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_89721433_89721471
transcript_81734.known	chr6	+	1300	8	FSM	ENSG00000118412.13	ENST00000548224.2	1300	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_6	32.5614019655049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATTCGAATGTTTC	89825744	True	NA	17	True	AATAAA	-20	NA	89829940	89874434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89871288_89871389_89873805
transcript_81735.known	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31.4081553457414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825697	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_81738.nic	chr6	+	1695	7	ISM	ENSG00000118412.13	ENST00000551025.4	6088	9	-59	8239	-14	356	5prime_fragment	FALSE	canonical	3	18	junction_1	30.0596628945391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATAGGCATATTAG	89825683	True	NA	50	True	AAGAAA	-6	NA	89829879	89863149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_81739.known	chr6	+	1280	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.6544084500616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825703	True	NA	NA	False	TATAAA	-24	NA	89829899	89862793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_81744.nnic	chr6	+	1199	6	NIC	ENSG00000118412.13	novel	1280	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	36.1474757071638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825701	True	NA	NA	False	TATAAA	-24	NA	89829897	89862793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_89830068_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_81746.known	chr6	+	6719	10	FSM	ENSG00000118412.13	ENST00000237177.10	6719	10	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	29.7470820230975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATTCGAATGTTTCTT	89825742	True	NA	19	True	AATAAA	-22	NA	89829938	89874436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873805
transcript_81748.known	chr6	-	4932	17	FSM	ENSG00000135341.18	ENST00000369329.8	4932	17	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	102.922737253485	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTACATAAAAGTGGTGA	-90581644	True	NA	-14	True	AATAAA	-21	NA	90587072	90513578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_81750.known	chr6	-	4830	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	0	0	0	multi-exon	TRUE	canonical	3	313	junction_5	32.9176750900384	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	-90581617	True	NA	-8	True	AATAAA	-27	NA	90587045	90513572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_81756.known	chr6	-	1885	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTTTTTAACTT	-93417915	True	NA	NA	False	AATAAA	-17	NA	93419547	93409653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_93411171_93414702_93414768_93419244
transcript_81757.known	chr6	-	2268	1	FSM	ENSG00000261366.1	ENST00000564541.1	2268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTGAGATAATCATTGT	-95577387	True	NA	NA	False	ATTAAA	-14	NA	95577450	95575182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_95575200_95577400
transcript_81758.known	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	9.01041064547005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	95575932	True	NA	-29	True	AATAAA	-23	NA	95577534	95609452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
transcript_81760.known	chr6	+	3399	2	FSM	ENSG00000172469.17	ENST00000369293.6	3399	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTATCCTCTTGTAT	95575882	True	NA	NA	False	AGTAAA	-14	NA	95577484	95589646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_95577639_95586401
transcript_81761.known	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_11	15.9494765578415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	96520616	True	NA	67	True	AATAAA	-19	NA	96521805	96555276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
transcript_81764.nic	chr6	+	1459	12	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-45	12316	-45	-12316	5prime_fragment	FALSE	canonical	3	68	junction_11	13.5127732654076	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGGAAGAAAAGATG	96520571	True	NA	NA	False	ATTAAA	-9	NA	96521760	96542960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893
transcript_81765.nic	chr6	+	1357	11	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-45	14656	-45	-14656	5prime_fragment	FALSE	canonical	3	75	junction_10	11.8663389467856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAAAGATGAGCGAA	96520571	True	NA	NA	False	AGTAAA	-3	NA	96521760	96540620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534
transcript_81766.nnic	chr6	-	1245	3	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-52	-36904	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTGAGCTGTGTGT	-96836281	True	NA	4	True	AATAAA	-25	NA	96837529	96831028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_96831899_96836264_96836378_96837267
transcript_81767.known	chr6	-	5967	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGAGTTTTTTTTAA	-96836229	True	NA	-1	True	AATAAA	-18	NA	96837477	96794124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_96799882_96837267
transcript_81768.known	chr6	-	624	4	FSM	ENSG00000123545.6	ENST00000489477.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	539.522628502889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAATCTTCCCTCCTGAA	-96882390	True	NA	-183	True	NA	NA	NA	96897874	96891150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_96891392_96896083_96896154_96896743_96896848_96897665
transcript_81771.known	chr6	-	2407	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_1	79.5	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAGTCCTATACTGCG	-96882407	True	NA	-3	True	AATAAA	-19	NA	96897891	96889314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_96891392_96896743_96896848_96897665
transcript_81773.nic	chr6	-	1590	12	NIC	ENSG00000146263.12	novel	2245	9	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.0023354904785	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAAATATTTTTCTTT	-97281038	True	NA	NA	False	AATAAA	-14	NA	97283249	97245978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_97246157_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_81776.nic	chr6	-	2179	10	NIC	ENSG00000146263.12	novel	5907	7	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_1	21.0648616198096	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	-97281038	True	NA	-4	True	AATAAA	-15	NA	97283249	97258662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_97259670_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_81779.nnic	chr6	-	2495	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-32	-1193	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAAAAGGAAAGGA	-97281038	True	NA	NA	False	AATAAA	-39	NA	97283249	97260855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_81783.nnic	chr6	-	1870	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-32	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAATATATATTTACT	-97281038	True	NA	-1	True	AATAAA	-15	NA	97283249	97261480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_81785.nnic	chr6	-	1538	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-32	-2150	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGGCATTGAATTCTG	-97281038	True	NA	NA	False	AAAAAG	-10	NA	97283249	97261812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_81789.nnic	chr6	-	1641	9	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-32	2183	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	23.6137539370596	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCTTTTAAAAGTATTT	-97281038	True	NA	NA	False	AATAAA	-41	NA	97283249	97263536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97264120_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_81814.nnic	chr6	+	1538	3	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	27.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCGTGTTTGGGCCATG	97775792	True	NA	9	True	NA	NA	NA	97779904	97792102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr6_+_97780096_97787395_97787501_97790860
transcript_81818.nnic	chr6	-	2324	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTGTTAATTAAAGTG	-97782418	False	NA	-3	True	AATAAA	-40	NA	97782517	97773941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_97775730_97781981
transcript_81820.nnic	chr6	-	1926	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATATGTGTTAATTAA	-97781243	False	NA	-7	True	AATAAA	-36	NA	97781342	97773945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_97775730_97781200
transcript_81822.nnic	chr6	-	2952	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAAAGATATGTGTTA	-97783074	False	68	-12	True	AATAAA	-43	NA	97783173	97773950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_97775711_97781981
transcript_81825.nnic	chr6	-	1573	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTTGTAGTTTCT	-97781243	False	NA	-3	True	AGTAAA	-21	NA	97781342	97774298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_97775730_97781200
transcript_81829.known	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_8	11.8769410369447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	-98946027	True	NA	1	True	AATAAA	-22	NA	98947946	98868534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
transcript_8183.known	chr1	-	1815	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	1100.75232725187	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	-156283749	True	NA	-22	True	ATTAAA	-14	NA	156338245	156308968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
transcript_81832.known	chr6	-	2810	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	16.8295684733745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAGCGACACAGGAGG	-98946087	True	NA	NA	False	NA	NA	NA	98948006	98873724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
transcript_81842.nic	chr6	-	1396	8	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	-19	-68	combination_of_known_junctions	FALSE	canonical	2	17	junction_5	125.080382317997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTTTTGTTATTTCG	-99391404	True	NA	-7	True	AATAAA	-19	NA	99394214	99369471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383007_99383131_99383697_99383825_99394073
transcript_81844.known	chr6	-	1325	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	32.1683937360191	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTGATCTAGGAGTGTA	-99391385	True	NA	-7	True	AATAAA	-17	NA	99394195	99369400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
transcript_81855.nnic	chr6	-	1127	6	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	0	-68	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	115.841961309363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTTTTGTTATTTCG	-99391385	True	NA	-7	True	AATAAA	-19	NA	99394195	99369471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99394073
transcript_81864.nic	chr6	-	2974	13	NIC	ENSG00000132424.17	novel	2862	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	572	junction_4	90.281465736637	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-99412921	True	NA	-12	True	AATAAA	-25	NA	99425315	99399963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_81867.known	chr6	-	5243	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	201.824447077198	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATGATATTACAGTT	-99412935	True	NA	NA	False	AATACA	-2	NA	99425329	99397628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_81872.known	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	223.265990422498	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-99412921	True	NA	-48	True	NA	NA	NA	99425315	99398988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_81874.known	chr6	-	5073	12	FSM	ENSG00000132424.17	ENST00000481229.2	5073	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	219.368854249814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGTGTGGAATCTCG	-99412898	True	NA	-22	True	TATAAA	-3	NA	99425292	99398068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412735_99414571_99414691_99416348_99416429_99425214
transcript_81875.known	chr6	-	5025	12	FSM	ENSG00000132424.17	ENST00000679525.1	5025	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	226.06347386271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCCCAAAATATAAATAAA	-99412921	True	NA	-40	True	AATAAA	-38	NA	99425315	99398086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409287_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_81886.known	chr6	-	3142	11	FSM	ENSG00000132424.17	ENST00000438806.5	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	211.324489825481	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-99412937	True	NA	-12	True	AATAAA	-25	NA	99425331	99399963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_81889.known	chr6	-	2422	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	76.6234950912578	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAACAAGG	-99412914	True	NA	91	True	AAAAAG	-6	NA	99425308	99401460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_81912.nic	chr6	-	1635	7	ISM	ENSG00000132424.17	ENST00000478777.5	2422	11	-638	6692	-615	0	5prime_fragment	FALSE	canonical	3	618	junction_1	96.0632025746013	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	-99425878	True	NA	5	True	AAGAAA	-43	NA	99425946	99408152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_81919.nic	chr6	-	937	6	ISM	ENSG00000132424.17	ENST00000438806.5	3142	11	3	8189	1	0	5prime_fragment	FALSE	canonical	3	100	junction_5	278.646729749337	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	-99412934	True	NA	5	True	AAGAAA	-43	NA	99425328	99408152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_81924.known	chr6	-	1027	5	FSM	ENSG00000132424.17	ENST00000498075.1	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	338.893419823991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGGTGGGAGGATTGC	-99412876	True	NA	NA	False	NA	NA	NA	99425270	99411735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99412319_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_81928.known	chr6	+	2588	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	9	3	9	-3	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	99424544	True	NA	NA	False	AATAAA	-19	NA	99424921	99432323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99425899_99430712
transcript_81931.known	chr6	-	5878	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	35.4342316847213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTGTATTAACAAAAAT	-99510849	True	NA	-2	True	AATAAA	-14	NA	99515423	99432324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_81938.known	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	449.835425152602	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	-99568324	False	389	-45	True	AATAAA	-16	NA	99568713	99542501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_81953.known	chr6	-	2153	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_7	91.1844919394078	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	-99558775	True	NA	-20	True	AATAAA	-20	NA	99568660	99542386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_81955.known	chr6	-	1035	12	FSM	ENSG00000112237.13	ENST00000523799.5	1035	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	389.0956456806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATTGGAAAGTGATT	NA	False	NA	NA	False	AATGAA	-22	NA	99568825	99543447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568717
transcript_81958.known	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	349.077035709174	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	-99558777	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_81959.known	chr6	-	958	11	FSM	ENSG00000112237.13	ENST00000523985.5	958	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	398.020715541289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATAGCTTGT	-99558775	True	NA	NA	False	AATAAA	-40	NA	99568660	99543474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99568495
transcript_81972.known	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	16.4527771987291	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	-99510915	True	NA	-5	True	AATAAA	-21	NA	99515489	99482261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_81986.known	chr6	+	1873	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.0184900284226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	99519774	True	NA	NA	False	NA	NA	NA	99521048	99533185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
transcript_81988.known	chr6	+	4376	4	FSM	ENSG00000279170.3	ENST00000651400.1	4376	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	30.5068298363935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGATGTAGTTTGGAT	99519743	True	NA	NA	False	ATTAAA	-16	NA	99521017	99579693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99575652
transcript_81992.known	chr6	+	336	3	FSM	ENSG00000279170.3	ENST00000636394.1	336	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTTATTTAGCCGGA	99519800	True	NA	NA	False	AGTAAA	-23	NA	99521074	99531720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99521148_99531362_99531537_99531631
transcript_81993.known	chr6	-	1123	2	FSM	ENSG00000112237.13	ENST00000523541.1	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	1332	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTTATTATAAAGATA	-99568300	False	NA	NA	False	AAAAAG	-43	NA	99568689	99562019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99562949_99568495
transcript_81996.nic	chr6	-	1418	6	ISM	ENSG00000112249.14	ENST00000522650.5	2828	13	-37	85261	-29	47613	5prime_fragment	FALSE	canonical	3	270	junction_3	27.2205804493585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGCCAGACGAGAAAAA	-100870455	True	NA	NA	False	AAGAAA	-37	NA	100881401	100800390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_81998.known	chr6	-	852	4	FSM	ENSG00000112249.14	ENST00000324723.10	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	140.292551477261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTTGACGAACTGCCA	-100870402	True	NA	NA	False	NA	NA	NA	100881348	100848419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_100848708_100864063_100864215_100867907_100868033_100881060
transcript_81999.known	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	137.18114544888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-100870365	True	NA	-5	True	AATAAA	-20	NA	100881311	100856302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
transcript_82.known	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_4	2566.82264677558	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
transcript_8200.known	chr1	-	1063	6	FSM	ENSG00000163468.15	ENST00000368256.3	1063	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1551.47782452731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAAGGACACTTTTTT	-156283815	True	NA	NA	False	AATATA	-2	NA	156338311	156332652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156333285_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_82009.known	chr6	+	1517	1	FSM	ENSG00000260000.2	ENST00000565695.2	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACTTTATTTTTACTT	100881300	True	NA	NA	False	AATAAA	-16	NA	100881470	100882987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_100881500_100883000
transcript_8201.known	chr1	+	512	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.85861230093008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	156338209	True	NA	NA	False	AGTAAA	-12	NA	156338502	156346990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
transcript_82011.known	chr6	-	4575	24	FSM	ENSG00000085382.12	ENST00000262903.9	4575	24	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_18	14.2461482871966	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	NA	False	NA	-8	True	AATAAA	-16	NA	104859919	104728093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
transcript_82013.nnic	chr6	-	592	4	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	-70	-1799	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.816496580927726	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	-104940262	True	NA	-5	True	AATAAA	-23	NA	104940444	104926499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_104926883_104931478_104931547_104940177_104940214_104940339
transcript_82014.nnic	chr6	-	524	3	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	-70	-1799	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	3	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	-104940262	True	NA	-5	True	AATAAA	-23	NA	104940444	104926499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_104926883_104940177_104940214_104940339
transcript_82015.known	chr6	-	1879	4	FSM	ENSG00000132429.10	ENST00000254765.4	1879	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	8.52447456836295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTTCCTGGAAAACAAAG	-105179733	True	NA	NA	False	AATAAA	-18	NA	105180014	105157899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_105158752_105159710_105159820_105161424_105162161_105179832
transcript_82016.known	chr6	-	1029	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCGAGATGCCATTGC	-105179714	True	NA	-80	True	TATAAA	-8	NA	105179995	105158359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
transcript_82018.known	chr6	-	7250	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_7	33.0728941359932	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTTTCTGGATGAGTG	-105396897	True	NA	NA	False	AATAAA	-16	NA	105403082	105273217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_82023.known	chr6	-	1888	9	FSM	ENSG00000057663.16	ENST00000646025.1	1888	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	167.63944755039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAATATGTTTTGTCATT	-106319742	True	NA	-31	True	AATAAA	-4	NA	106325791	106185941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106217463_106217602_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_8203.known	chr1	+	595	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTGTTGTTTTCCTC	156338232	True	NA	NA	False	AGTAAA	-17	NA	156338525	156346995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
transcript_82033.known	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	132.717438068051	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319368	False	53	NA	False	AATAAA	-1	NA	106325417	106184475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
transcript_82034.known	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	50.2008211982592	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319711	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_82037.known	chr6	-	3035	7	FSM	ENSG00000057663.16	ENST00000635758.2	3035	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	122.463259796561	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319689	True	NA	NA	False	AATAAA	-1	NA	106325738	106184475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
transcript_8204.known	chr1	+	601	4	FSM	ENSG00000163467.12	ENST00000470342.5	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATTGTGTTGTTTTCC	156338213	True	NA	NA	False	AGTAAA	-15	NA	156338506	156346993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346778
transcript_82045.known	chr6	-	2893	9	FSM	ENSG00000130347.13	ENST00000369063.8	2893	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	11.2998893799895	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATCTGAT	-106627024	True	NA	NA	False	NA	NA	NA	106629498	106570770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106628747
transcript_82048.nnic	chr6	-	1482	7	NIC	ENSG00000130347.13	novel	2893	9	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.4674105608656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGTTCTTATTTGGT	-106626991	True	NA	-21	True	AATAAA	-17	NA	106629465	106571974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106621424_106621494_106622817_106622970_106628747
transcript_8205.known	chr1	-	827	2	FSM	ENSG00000163468.15	ENST00000489870.1	827	2	0	0	0	0	multi-exon	FALSE	canonical	3	4069	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCACTTGGGCCCAGGG	-156283710	True	NA	NA	False	NA	NA	NA	156338206	156335114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156335889_156338153
transcript_82052.known	chr6	+	4106	11	FSM	ENSG00000130348.11	ENST00000369046.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_10	22.7675207258059	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGAACAGAGTGTTTT	106627194	True	NA	10	True	ATTAAA	-24	NA	106629577	106668417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106654729_106654923_106655614_106655733_106662979_106663186_106665781
transcript_82055.nnic	chr6	+	1869	10	NIC	ENSG00000130348.11	novel	4106	11	NA	NA	-12	-2056	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	56.2727046084566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAGAGAGTCAAATGG	106629547	False	NA	24	True	AATAAA	-38	NA	106629565	106666361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106655614_106655733_106662979_106663186_106665781
transcript_82056.nic	chr6	+	1289	9	ISM	ENSG00000130348.11	ENST00000369046.8	4106	11	-12	12672	-12	1922	5prime_fragment	FALSE	canonical	3	172	junction_2	16.5812393987904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTTTCTTCATTC	106629547	False	NA	16	True	ATTAAA	-17	NA	106629565	106655745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106654729_106654923_106655614
transcript_82061.known	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	10.7030629053349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	106627230	True	NA	NA	False	NA	NA	NA	106629613	106653823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
transcript_82064.known	chr6	-	2513	3	FSM	ENSG00000272398.6	ENST00000619133.4	2513	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	1327.5	4684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-106975404	False	NA	-11	True	AATAAA	-22	NA	106975465	106969830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971835_106974577_106974755_106975133
transcript_82066.known	chr6	-	825	2	FSM	ENSG00000272398.6	ENST00000622315.1	825	2	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTGGCTTGAGAAAT	-106973978	False	NA	-94	True	NA	NA	NA	106974039	106971379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971835_106973669
transcript_82067.known	chr6	-	1026	2	FSM	ENSG00000272398.6	ENST00000615659.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAATCTACCCCCAGAT	-106975266	False	533	NA	False	NA	NA	NA	106975327	106971002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971835_106975133
transcript_82068.known	chr6	-	586	2	FSM	ENSG00000272398.6	ENST00000620405.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAACTCACTTTCCT	-106942297	True	NA	NA	False	NA	NA	NA	106974732	106971093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971525_106974577
transcript_82081.known	chr6	+	1146	5	FSM	ENSG00000130349.10	ENST00000625458.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	95.5458005356593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	107028543	False	NA	15	True	AATAAA	-15	NA	107028568	107051335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_107028798_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_82088.known	chr6	+	1158	4	FSM	ENSG00000130349.10	ENST00000311381.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	37.8623236946117	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTATTTAAAATGTT	107026298	True	NA	22	True	AATAAA	-18	NA	107028198	107051586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_107028272_107039748_107040231_107044259_107044333_107051056
transcript_8209.known	chr1	-	780	3	FSM	ENSG00000125462.19	ENST00000663987.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTATCTGTTTACATT	-156456618	False	NA	NA	False	AATAAA	-18	NA	156456631	156446166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156446574_156455627_156455722_156456352
transcript_82095.known	chr6	+	1420	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	85.2655981168385	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	107026312	True	NA	16	True	AATAAA	-16	NA	107028212	107051336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
transcript_8210.known	chr1	-	857	3	FSM	ENSG00000125462.19	ENST00000452465.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCAAGTGATCTACATGG	-156456739	False	NA	NA	False	ATTAAA	-18	NA	156456752	156452889	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156453253_156455627_156455722_156456352
transcript_82103.known	chr6	-	3536	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	14.2112344176524	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	-107458565	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
transcript_82106.known	chr6	-	1236	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	25.4950975679639	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-107458565	True	NA	-4	True	AATAAA	-15	NA	107459564	107264185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
transcript_82107.nnic	chr6	-	875	4	NNC	ENSG00000164494.12	novel	1236	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	36.7090663944965	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-107458582	True	NA	-4	True	AATAAA	-15	NA	107459581	107264185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_107264513_107274028_107274228_107334197_107334333_107459367
transcript_82109.known	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	364	junction_6	45.3204975700841	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-107945397	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_8211.known	chr1	-	543	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTGGTAGTGGATA	-156421498	True	NA	-3	True	AATAAA	-22	NA	156421752	156404256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156404602_156421554
transcript_82116.known	chr6	-	482	3	FSM	ENSG00000025796.14	ENST00000460009.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTTATTGGTGCA	-107957920	False	NA	NA	False	AATAAA	-28	NA	107958042	107954583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107954767_107955964_107956107_107957885
transcript_82117.known	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	18.8297636735037	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-108070280	True	NA	50	True	ATTAAA	-20	NA	108074741	108041408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
transcript_82119.known	chr6	-	1535	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	47.7516724547133	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTCTCCTATTTTTC	-108254386	True	NA	NA	False	ATTAAA	-20	NA	108261040	108211221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
transcript_8212.known	chr1	-	473	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTAGTGGATATACCT	-156429301	True	NA	2	True	AATAAA	-27	NA	156429423	156404251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156404602_156426797_156426873_156429375
transcript_82120.known	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	405.267264352249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	-108261089	False	NA	NA	False	NA	NA	NA	108261244	108212004	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
transcript_82122.known	chr6	+	5048	13	FSM	ENSG00000135537.17	ENST00000368977.9	5048	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.0063623674308	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGCTGGTAGGAAAG	108294658	True	NA	NA	False	NA	NA	NA	108295053	108526001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_82123.nic	chr6	+	1551	12	NIC	ENSG00000135537.17	novel	5048	13	NA	NA	-116	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	9.15522702166264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGGCAGAACTCCTTATT	108294797	True	NA	11	True	AATAAA	-20	NA	108294874	108522466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108519696_108519811_108522296
transcript_8213.known	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_11	5.72615900976503	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-156568374	True	NA	-18	True	AATAAA	-18	NA	156572565	156525404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
transcript_82130.nic	chr6	+	1263	4	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-27	104876	-21	-6747	5prime_fragment	FALSE	canonical	3	22	junction_3	3.68178700572909	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTAATTTTATTAGAAA	108847676	True	NA	13	True	AATAAA	-26	NA	108848394	108869600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823
transcript_82141.known	chr6	+	12903	11	FSM	ENSG00000183137.15	ENST00000517392.6	12903	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	18.450203250913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTGTATATTTTGTT	109094399	True	NA	NA	False	CATAAA	-18	NA	109095506	109174418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
transcript_8215.known	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	192.284334531242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	-156595723	True	NA	-12	True	NA	NA	NA	156601470	156595212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
transcript_82151.nic	chr6	+	1626	10	ISM	ENSG00000183137.15	ENST00000368968.6	1649	11	-357	2398	0	0	5prime_fragment	FALSE	canonical	3	22	junction_1	19.1472526475893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	109095125	True	NA	13	True	AATAAA	-18	NA	109095162	109160765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_82164.known	chr6	+	908	7	FSM	ENSG00000183137.15	ENST00000519095.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.5309854241122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATATAAAATAAAAGACA	109094404	True	NA	NA	False	AAAAAG	-7	NA	109095511	109155974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_82165.nic	chr6	+	1575	6	ISM	ENSG00000183137.15	ENST00000520761.1	865	8	-46	2649	0	4	5prime_fragment	FALSE	canonical	2	20	junction_1	24.3688325530789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTGTATTTTTCATA	109094397	True	NA	NA	False	AATAAA	-16	NA	109095504	109156797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_82167.known	chr6	+	1649	11	FSM	ENSG00000183137.15	ENST00000368968.6	1649	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.3649410743016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTATTGATTGAAG	109094412	True	NA	NA	False	AATAAA	-15	NA	109095519	109163163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160731_109162748
transcript_82168.known	chr6	-	2414	7	FSM	ENSG00000135535.17	ENST00000413644.6	2414	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	282.254465568454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109373307	True	NA	0	True	AATAAA	-22	NA	109382457	109366513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109368326_109368921_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_82169.known	chr6	-	3020	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	47.964153281383	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109373317	True	NA	0	True	AATAAA	-22	NA	109382467	109366513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_82172.known	chr6	-	2936	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	291.649189952587	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109373294	True	NA	-4	True	AATAAA	-18	NA	109382444	109366517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_82175.known	chr6	-	590	4	FSM	ENSG00000135535.17	ENST00000512212.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	58.3913996711464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTCGGTGAATGTG	-109373261	True	NA	NA	False	NA	NA	NA	109382411	109375886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109376113_109377899_109377972_109379578_109379663_109382203
transcript_82176.known	chr6	+	872	1	FSM	ENSG00000260273.1	ENST00000563105.1	872	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGATCTTTTCAGTGT	109382784	False	NA	NA	False	AATAGA	-15	NA	109382794	109383666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109382800_109383700
transcript_82178.known	chr6	+	1684	10	FSM	ENSG00000135587.9	ENST00000258052.8	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	9.79543859579297	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440667	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_82179.nic	chr6	+	1693	9	NIC	ENSG00000135587.9	novel	1684	10	NA	NA	117	0	intron_retention	FALSE	canonical	3	75	junction_5	9.01387818865997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440418	True	NA	5	True	AATAAA	-14	NA	109440840	109443919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442885_109442976_109443082_109443266_109443421_109443516
transcript_82180.known	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_24	53.9912544358395	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-109453591	True	NA	-1	True	ATTAAA	-17	NA	109455772	109444061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_82182.known	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	15.4020200695306	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	-109479910	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
transcript_82184.known	chr6	-	2566	12	FSM	ENSG00000155085.16	ENST00000285397.9	2566	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.5558292684967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACTATAAACATTCTTG	-109690978	True	NA	NA	False	AATAAA	-32	NA	109691217	109631692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109633104_109633183_109633324_109641517_109641617_109644613_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_8219.known	chr1	+	1111	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	1832	junction_5	53.9874059387928	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	156575942	True	NA	33	True	AATGAA	-21	NA	156591775	156594299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
transcript_82198.nic	chr6	-	653	5	ISM	ENSG00000155085.16	ENST00000285397.9	2566	12	15	39971	0	-26994	5prime_fragment	FALSE	canonical	3	12	junction_4	12.3161479367536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGGTCCATCTTGCAG	-109690963	True	NA	NA	False	AGTAAA	-14	NA	109691202	109671663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_82199.known	chr6	+	3025	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.3083463840334	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	109688465	True	NA	11	True	AATAAA	-14	NA	109691295	109825426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82200.known	chr6	+	2915	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	54.3957948221282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	109688434	True	NA	-1	True	AATAAA	-2	NA	109691264	109825414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82201.known	chr6	+	2811	22	FSM	ENSG00000112367.12	ENST00000674649.1	2811	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	53.8377507085924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTCTGAAGCCTTTCT	109688481	True	NA	-4	True	ATTAAA	-6	NA	109691311	109825352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82205.known	chr6	+	2398	20	FSM	ENSG00000112367.12	ENST00000675009.1	2398	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	73.3470859260981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGCCCCTAGGAAAAGA	109688450	True	NA	NA	False	NA	NA	NA	109691280	109825199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82206.known	chr6	+	2187	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.4157270931498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGTCATTTTTTTA	109688481	True	NA	NA	False	GATAAA	-11	NA	109691311	109767208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
transcript_82207.known	chr6	+	1877	14	FSM	ENSG00000112367.12	ENST00000675973.1	1877	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	67.9090062958859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTGCTCAGTAAATATT	109688481	True	NA	NA	False	AATAAA	-16	NA	109691311	109767027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
transcript_82208.known	chr6	+	1387	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	26.9351072023113	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688465	True	NA	34	True	AATAAA	-20	NA	109691295	109743480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
transcript_82209.nic	chr6	+	905	7	ISM	ENSG00000112367.12	ENST00000454215.6	1129	9	-31	4834	0	-61	5prime_fragment	FALSE	canonical	3	238	junction_6	15.9338912036228	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTTTGTATATTATTC	109688434	True	NA	4	True	ATTAAA	-18	NA	109691264	109738412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324
transcript_82210.known	chr6	+	1158	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	88.5525581536499	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688464	True	NA	34	True	AATAAA	-20	NA	109691294	109743480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
transcript_82212.known	chr6	+	2725	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.1486439719681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	109688457	True	NA	NA	False	AATAAA	-20	NA	109691287	109791772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
transcript_82213.known	chr6	+	3859	15	FSM	ENSG00000168438.15	ENST00000307731.2	3859	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	13.7625638332872	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	110177250	True	NA	29	True	AATAAA	-29	NA	110180426	110232232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_82217.nic	chr6	+	734	6	ISM	ENSG00000168438.15	ENST00000606893.5	3372	15	248	19579	-32	1438	internal_fragment	FALSE	canonical	3	146	junction_1	12.0266371026983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAACAGGAAGAAGAGAA	110177212	True	NA	17	True	AAAAAG	-36	NA	110180388	110210754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706
transcript_82218.nic	chr6	+	575	5	ISM	ENSG00000168438.15	ENST00000606893.5	3372	15	248	21221	-32	0	internal_fragment	FALSE	canonical	3	146	junction_1	12.7573508221731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAAGAGGAAAAA	110177212	True	NA	8	True	NA	NA	NA	110180388	110209112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083
transcript_82220.nnic	chr6	-	1186	3	NNC	ENSG00000155111.15	novel	1083	2	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	-110814697	True	NA	NA	False	AATAAA	-19	NA	110815427	110813158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_110814125_110815008_110815178_110815376
transcript_82221.known	chr6	-	1083	2	FSM	ENSG00000155111.15	ENST00000468997.5	1083	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	-110815059	False	NA	NA	False	AATAAA	-19	NA	110815125	110813158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_110814125_110815008
transcript_82223.known	chr6	+	6589	9	FSM	ENSG00000123505.19	ENST00000672937.2	6589	9	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	68.4525383020966	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTATGGTGGTATTG	110856426	True	NA	1	True	AATAAA	-14	NA	110874784	110898879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110887504_110887592_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82231.known	chr6	+	1605	8	FSM	ENSG00000123505.19	ENST00000368877.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	218.033886151222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCGTCCTCATTAGGT	110856426	True	NA	NA	False	NA	NA	NA	110874784	110893982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82234.known	chr6	+	3059	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	289.483483984838	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	110856425	True	NA	25	True	AATAAA	-24	NA	110874783	110895708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82235.known	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	258.13562326808	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	110874759	False	NA	30	True	AATAAA	-29	NA	110874769	110895713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82238.known	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	1705	junction_1	163.149501991272	2287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	110935481	True	NA	14	True	CATAAA	-16	NA	110958705	110967872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_8224.known	chr1	+	901	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_4	764.197252023324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	156575928	True	NA	15	True	AATAAA	-17	NA	156591761	156594131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
transcript_82240.known	chr6	+	800	6	FSM	ENSG00000155115.7	ENST00000480191.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	826.656978437852	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCATTTTATTGGC	110958895	False	NA	32	True	CATAAA	-34	NA	110958927	110967890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110959043_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_82256.known	chr6	+	3671	10	FSM	ENSG00000197498.13	ENST00000441448.7	3671	10	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_7	58.2713956890991	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	110970730	True	NA	17	True	AATAAA	-17	NA	110982037	111028263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_82264.known	chr6	+	3621	9	FSM	ENSG00000197498.13	ENST00000607388.1	3621	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	326.560269131136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	110970742	True	NA	17	True	AATAAA	-17	NA	110982049	111028263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110982130_110985005_110985139_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_82269.known	chr6	+	14805	4	FSM	ENSG00000173214.7	ENST00000671876.2	14805	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.55777733351102	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTTGGTTTAAGATTC	111257382	True	NA	5	True	AATAAA	-16	NA	111259338	111280005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111259728_111262256_111262426_111263829_111263947_111265875
transcript_8227.known	chr1	+	1012	5	FSM	ENSG00000163382.13	ENST00000368233.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	1915	junction_4	31.9570023625496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGGGACGTGGAGA	156575944	True	NA	NA	False	NA	NA	NA	156591777	156593876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407
transcript_82279.nnic	chr6	+	675	5	NNC	ENSG00000231889.8	novel	609	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.10327780786685	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111482508	False	NA	NA	False	ATTAAA	-16	NA	111483561	111503608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_111483666_111484117_111484146_111484743_111484862_111497867_111497980_111503295
transcript_82284.known	chr6	+	609	4	FSM	ENSG00000231889.8	ENST00000525151.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.4222150491349	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111482462	True	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111484117_111484146_111484743_111484862_111503295
transcript_82289.known	chr6	+	784	4	FSM	ENSG00000231889.8	ENST00000438298.7	1093	4	25	284	7	-12	multi-exon	FALSE	canonical	1	8	junction_2	23.3666428910958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTATTTCTTAAAAAAA	111482508	False	NA	NA	False	ACTAAA	-14	NA	111483561	111576741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111484743_111484862_111574620_111574803_111576361
transcript_82296.known	chr6	+	1106	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	45	1020	4	135	multi-exon	FALSE	canonical	3	18	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTCCAAGAAAAACTC	111482487	True	NA	NA	False	NA	NA	NA	111483540	111577160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111574620_111574803_111576361
transcript_82299.nnic	chr6	+	485	3	NNC	ENSG00000231889.8	novel	915	3	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	25	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111483704	False	NA	NA	False	ATTAAA	-16	NA	111483742	111503608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_111483797_111484743_111484862_111503295
transcript_82300.known	chr6	+	324	2	FSM	ENSG00000231889.8	ENST00000420651.3	442	2	21	97	3	-97	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTTATTTGCATA	111482504	False	NA	41	True	NA	NA	NA	111483557	111503511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111503295
transcript_82301.known	chr6	-	2785	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	35.5996254661946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-111606264	False	NA	-7	True	AATAAA	-19	NA	111606278	111558939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
transcript_82302.known	chr6	-	2264	9	FSM	ENSG00000056972.20	ENST00000359831.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.8896066951421	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-111604393	True	NA	-7	True	AATAAA	-19	NA	111605871	111558939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_111559552_111562964_111563040_111566443_111566558_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_82306.known	chr6	-	2225	12	FSM	ENSG00000074935.14	ENST00000368662.10	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	19.807336482031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	-112085613	True	NA	2	True	AATAAA	-28	NA	112087482	112070662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_8231.known	chr1	+	2611	6	FSM	ENSG00000163382.13	ENST00000681922.1	2611	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	772.177596152595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCAAGACAG	156575932	True	NA	NA	False	NA	NA	NA	156591765	156602460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156593556_156593881_156594091_156601498
transcript_82319.nic	chr6	-	2132	11	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	-32	-114	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	31.758620876858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACTTGTTATTGTT	NA	False	NA	-5	True	AATAAA	-17	NA	112087561	112070776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_82324.nnic	chr6	-	1962	11	NIC	ENSG00000074935.14	novel	1645	12	NA	NA	0	-114	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	35.7659055526349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACTTGTTATTGTT	-112085640	True	NA	-5	True	AATAAA	-17	NA	112087509	112070776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_82330.nic	chr6	-	809	7	ISM	ENSG00000074935.14	ENST00000605457.5	1645	12	-52	4947	-32	159	5prime_fragment	FALSE	canonical	3	106	junction_4	12.4286854583348	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	112087561	112076275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_82331.nic	chr6	-	699	6	ISM	ENSG00000074935.14	ENST00000604743.5	959	8	-11	1566	0	159	5prime_fragment	FALSE	canonical	3	32	junction_3	38.8710689330767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	-112085640	True	NA	-7	True	AATAAA	-16	NA	112087509	112076275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_82333.known	chr6	+	2551	4	FSM	ENSG00000203778.8	ENST00000368656.7	2551	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	15.121728296285	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAAAAGTGTAACATTC	112085538	True	NA	NA	False	AATAAA	-24	NA	112087590	112102790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_112087721_112097040_112097202_112099269_112099409_112100669
transcript_82336.known	chr6	+	598	4	FSM	ENSG00000203778.8	ENST00000604268.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.661803619433	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	112085585	True	NA	27	True	AATAAA	-28	NA	112087637	112100895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_112087710_112097040_112097202_112099269_112099409_112100669
transcript_82337.known	chr6	-	619	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-112254470	True	NA	NA	False	AATAAA	-23	NA	112254567	112253781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_112254292_112254458
transcript_82338.known	chr6	-	645	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGATGTTGAGAGTTG	-112254481	True	NA	NA	False	AATAAA	-21	NA	112254578	112253783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_112254292_112254441
transcript_82339.known	chr6	+	4296	2	FSM	ENSG00000277443.3	ENST00000612661.2	4296	2	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTAAAATAGGATTTT	113837229	True	NA	19	True	AATAAA	-24	NA	113857344	113863475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_113857848_113859682
transcript_8234.known	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	52.4423882144268	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-156595732	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_8235.nic	chr1	+	1190	5	ISM	ENSG00000132692.19	ENST00000329117.10	3297	14	14711	0	99	0	3prime_fragment	TRUE	canonical	3	14	junction_1	6.06217782649107	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	156656729	True	NA	7	True	AATAAA	-22	NA	156656827	156659528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_82353.nnic	chr6	+	1165	5	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1213	66	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	45.7841402671274	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	114423774	True	NA	NA	False	AATAAA	-22	NA	114424398	114456700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114424453_114425568_114425673_114437968_114438067_114448966_114449032_114455856
transcript_82360.known	chr6	+	2016	10	FSM	ENSG00000228624.8	ENST00000519104.5	2016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.45452467048606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTGATATTCATATT	NA	False	NA	NA	False	AATAAA	-19	NA	113969700	114340738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_113970279_113991892_113992019_113993342_113993488_113995599_113996061_114088936_114089020_114116117_114116181_114178652_114178721_114179024_114179158_114235629_114235772_114340521
transcript_82361.known	chr6	+	591	4	FSM	ENSG00000228624.8	ENST00000436876.6	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCAGAGTCATCT	113969800	False	NA	NA	False	TTTAAA	-16	NA	113970105	113995644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_113970279_113991892_113992121_113993342_113993488_113995599
transcript_82365.nnic	chr6	+	1199	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1552	66	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	34.1792659696229	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	114424048	False	NA	NA	False	AATAAA	-22	NA	114424059	114456700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114424246_114425568_114425673_114448966_114449032_114455856
transcript_82366.nnic	chr6	+	1233	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1379	66	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	40.2850951207626	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	114424185	False	NA	NA	False	AATAAA	-22	NA	114424232	114456700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114424453_114425568_114425673_114448966_114449032_114455856
transcript_82367.nnic	chr6	+	1166	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1358	66	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	30.9228430488243	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	114424206	False	NA	NA	False	AATAAA	-22	NA	114424253	114456700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114424407_114425568_114425673_114448966_114449032_114455856
transcript_82368.nnic	chr6	+	2084	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1212	66	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	32.4995726467629	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	114423775	True	NA	NA	False	AATAAA	-22	NA	114424399	114456700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114425471_114425568_114425673_114448966_114449032_114455856
transcript_8238.known	chr1	-	1033	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_4	417.843496419413	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAACCTGTCTC	-156705665	False	145	29	True	ATTAAA	-8	NA	156705816	156699617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
transcript_82393.known	chr6	-	2084	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	1102.96378092883	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	-113920982	True	NA	30	True	ATTAAA	-14	NA	113971157	113940717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
transcript_82411.known	chr6	-	2000	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	854.097558276134	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	-113970706	False	NA	30	True	ATTAAA	-14	NA	113970724	113940717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
transcript_82412.known	chr6	-	9737	14	FSM	ENSG00000196591.12	ENST00000519065.6	9737	14	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_10	184.432248909647	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTTGCTGATCAC	-113920973	True	NA	NA	False	AATAAA	-14	NA	113971148	113933027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_8242.known	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_3	69.1712849863776	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	-156689177	True	NA	-34	True	AATAAA	-2	NA	156705583	156699605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
transcript_82426.known	chr6	-	553	5	FSM	ENSG00000196591.12	ENST00000425835.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	155.478897281914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGTAAACCATAGGTTGA	-113970860	False	NA	NA	False	AATAAA	-25	NA	113970878	113955926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_82427.known	chr6	-	733	3	FSM	ENSG00000196591.12	ENST00000521233.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	3090	junction_2	73	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTTTGCTCCCCTGA	-113920961	True	NA	NA	False	NA	NA	NA	113971136	113958426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113958767_113959905_113960019_113970856
transcript_82428.known	chr6	-	690	2	FSM	ENSG00000196591.12	ENST00000520170.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	3090	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTACAATAA	-113920962	True	NA	NA	False	NA	NA	NA	113971137	113959609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113960019_113970856
transcript_8243.nic	chr1	+	1806	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	13	0	intron_retention	FALSE	canonical	3	16	junction_6	17.9022287975092	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156727266	True	NA	25	True	ATTAAA	-14	NA	156728481	156736949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
transcript_82430.known	chr6	+	896	3	FSM	ENSG00000287097.1	ENST00000656833.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGGTCTGTACGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	114822993	115002280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_114823036_114998256_114998420_115001589
transcript_82434.known	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	38.043037829184	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	116094342	True	NA	4	True	ATTAAA	-15	NA	116100852	116249497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
transcript_82438.known	chr6	+	667	7	FSM	ENSG00000178425.14	ENST00000419791.3	667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	148.972872250845	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTAAAGTGGGTCCTG	116094340	True	NA	NA	False	NA	NA	NA	116100850	116145495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116145437
transcript_8244.known	chr1	+	2271	8	FSM	ENSG00000143303.12	ENST00000368216.9	2271	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	16.3482508581942	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTAGGTAGATAAAAG	156727253	True	NA	36	True	ATTAAA	-25	NA	156728468	156736960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_82441.nnic	chr6	-	2491	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-12	0	multi-exon	FALSE	canonical	3	48	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-116251400	True	NA	-3	True	AATAAA	-15	NA	116254087	116249963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr6_-_116250419_116252051
transcript_82442.known	chr6	-	4112	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-116251388	True	NA	-3	True	AATAAA	-15	NA	116254075	116249963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_116250000_116254100
transcript_82443.known	chr6	+	10621	6	FSM	ENSG00000111817.19	ENST00000644252.3	10621	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	10.8332820511607	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTATGGTGTTTTTG	116365395	True	NA	8	True	AATAAA	-21	NA	116370946	116444861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116433342_116433551_116435586
transcript_82449.known	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	274.896789537381	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	116561253	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_82452.known	chr6	+	5385	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_4	54.3251527583883	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	116561268	True	NA	NA	False	AATAAA	-19	NA	116571503	116597675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_82454.nic	chr6	+	492	4	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-20	8711	-5	-1334	5prime_fragment	FALSE	canonical	3	634	junction_1	40.4227658628155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAGAAGAAGCTGAAAA	116561248	True	NA	NA	False	GATAAA	-38	NA	116571483	116588964	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841
transcript_82458.nic	chr6	-	1901	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	40.879225911349	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666730	True	NA	-1	True	AATAAA	-22	NA	116668795	116635617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
transcript_8246.known	chr1	+	1802	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	19.310331143947	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	NA	False	NA	25	True	ATTAAA	-14	NA	156728441	156736949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_82460.known	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	12.7888840621673	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666701	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
transcript_82463.known	chr6	+	2150	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	25.2978179263891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	116679715	True	NA	2	True	AATAAA	-17	NA	116681210	116741866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
transcript_82465.known	chr6	+	11288	14	FSM	ENSG00000196911.11	ENST00000368564.7	11288	14	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_4	19.293436355158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTATGCTTTTTA	116679715	True	NA	3	True	AATAAA	-18	NA	116681210	116741867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135
transcript_82469.nic	chr6	+	1492	2	ISM	ENSG00000196911.11	ENST00000356348.6	2150	15	-25	51208	-1	-8140	5prime_fragment	FALSE	canonical	3	87	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAACGATATTTATTTA	116679690	True	NA	NA	False	NA	NA	NA	116681185	116690658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_116681339_116689319
transcript_82473.known	chr6	-	4590	8	FSM	ENSG00000047932.14	ENST00000052569.10	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_6	10.3509833901353	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-117596689	True	NA	-4	True	AATAAA	-24	NA	117602528	117560268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579065_117602003
transcript_82476.nic	chr6	-	757	3	ISM	ENSG00000047932.14	ENST00000052569.10	4590	8	-33	15050	-19	-15047	5prime_fragment	FALSE	canonical	3	142	junction_1	3	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGCACAACTTGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	117602561	117575318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_117575353_117578899_117579065_117602003
transcript_82478.nnic	chr6	-	1227	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	2	65199	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	13.8884444373331	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTAAGCCTCATGTTT	-117675319	False	38	NA	False	ATTAAA	-17	NA	117675330	117608547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_82480.nnic	chr6	-	1060	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	2	65032	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	13.8884444373331	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTGAA	-117675319	False	38	NA	False	NA	NA	NA	117675330	117608714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_82483.nnic	chr6	+	2085	5	NNC	ENSG00000153989.8	novel	4796	5	NA	NA	9	-2139	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	118.140805820851	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCCAGTGACATTAC	117670832	True	NA	NA	False	AATAAA	-16	NA	117675477	117708588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_117675523_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_82485.known	chr6	+	4796	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	5.04975246918104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCCACATTCAGTTA	117670823	True	NA	102	True	AATAAA	-14	NA	117675468	117710727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_82486.nic	chr6	-	2522	12	NIC	ENSG00000111860.14	novel	7373	13	NA	NA	-66	-4432	combination_of_known_junctions	TRUE	canonical	3	21	junction_11	7.40113906801732	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATTACCTTTGGAAAAT	-118573732	True	NA	NA	False	AAAAAG	-9	NA	118574134	118465212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_118465569_118469071_118469304_118470536_118470645_118479870_118479922_118480395_118480514_118481778_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118573990
transcript_82488.nnic	chr6	+	1195	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8640	5458	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	49	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATGACTCCGATAA	118572339	True	NA	3	True	AATAAA	-17	NA	118574299	118582298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_118574700_118576250_118576476_118581728
transcript_82489.nic	chr6	+	1101	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8529	0	8529	0	3prime_fragment	FALSE	canonical	3	117	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGTACCAAGATGCAAAT	NA	False	NA	19	True	ATTAAA	-29	NA	118574188	118576840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_118574700_118576250
transcript_82490.nic	chr6	+	2897	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8728	-1995	8728	1995	3prime_fragment	FALSE	canonical	3	117	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCCTGAGTGCTAGT	118572427	True	NA	27	True	AGTAAA	-18	NA	118574387	118578835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_118574700_118576250
transcript_82492.known	chr6	+	2434	4	FSM	ENSG00000111875.8	ENST00000229595.6	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_2	61.584630117154	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAGTGGTTAATATAA	118889650	True	NA	-71	True	AATAAA	-20	NA	118894151	118909171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_118894523_118900765_118900882_118905651_118905829_118907401
transcript_82499.known	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	121407421	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_121435833_121446831
transcript_82500.known	chr6	+	2950	2	FSM	ENSG00000152661.9	ENST00000649003.1	2950	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAACATAGCTTCTAT	121407370	True	NA	8	True	AATAAA	-11	NA	121435594	121449715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_121435661_121446831
transcript_82501.known	chr6	+	2596	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	32.939654420369	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	122397692	True	NA	NA	False	AATATA	-11	NA	122399651	122433119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
transcript_82503.known	chr6	+	2643	12	FSM	ENSG00000025156.13	ENST00000452194.5	2643	12	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_10	13.6678424542929	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	122397591	True	NA	NA	False	AATATA	-11	NA	122399550	122433119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122431429_122431515_122431924
transcript_82506.known	chr6	-	3125	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	24.6215804168259	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGTGTACTGATTAT	-122468991	True	NA	-4	True	AATAAA	-15	NA	122471807	122443350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
transcript_82520.nnic	chr6	+	1535	7	NNC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	65.7512146064407	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	122481227	True	NA	12	True	ATTAAA	-23	NA	122482032	122725892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_122482267_122585920_122586008_122603503_122603624_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_82521.nnic	chr6	+	1476	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	72.0570761426123	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	122481227	True	NA	12	True	ATTAAA	-23	NA	122482032	122725892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122701439_122701501_122717786_122717964_122725127
transcript_82522.nic	chr6	+	1449	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	68.7719661877813	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	122481254	True	NA	12	True	ATTAAA	-23	NA	122482059	122725892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585492_122585554_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_82527.nnic	chr6	+	1415	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	142	junction_2	9.62496753241277	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	122481227	True	NA	12	True	ATTAAA	-23	NA	122482032	122725892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_82530.nnic	chr6	+	1348	5	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	65.5147884068933	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	122481227	True	NA	12	True	ATTAAA	-23	NA	122482032	122725892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122717786_122717964_122725127
transcript_82531.known	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.5143607047182	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	122778386	True	NA	15	True	AATAAA	-17	NA	122779715	122784074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
transcript_82532.known	chr6	+	1763	8	FSM	ENSG00000172594.13	ENST00000368440.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.13052351280027	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAGTTTTCTTAAC	122788894	True	NA	7	True	AATAAA	-21	NA	122789257	122809720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122789459_122795676_122795891_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_82534.nnic	chr6	-	2654	9	NNC	ENSG00000186439.14	novel	4649	21	NA	NA	49177	1152	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	82.6232980157534	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	-123583242	True	NA	1	True	AATAAA	-28	NA	123587732	123497036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123498646_123503718_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82535.nnic	chr6	-	1523	9	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49156	0	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	82.6232980157534	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTCGGATTTGGTGG	-123583263	True	NA	0	True	AATAAA	-17	NA	123587753	123498188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123498646_123503718_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82539.nnic	chr6	-	2958	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49155	1823	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_1	58.9125952369357	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTTTCAGTCTACTATT	-123583264	True	NA	NA	False	ATTAAA	-21	NA	123587754	123501827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82541.nnic	chr6	-	842	7	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49155	-8694	at_least_one_novel_splicesite	FALSE	canonical	3	153	junction_1	54.8533398152646	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAGAAAAAAGAAAAACCA	-123583264	True	NA	NA	False	NA	NA	NA	123587754	123512344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82546.nnic	chr6	-	781	6	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49155	12497	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_1	44.5394207416307	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAGTAAGAGA	-123583264	True	NA	NA	False	AAAAAG	-6	NA	123587754	123516183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82547.nnic	chr6	-	1545	6	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49177	196	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	99.9811982324677	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCATTATGCTCAAGCTG	-123583242	True	NA	-10	True	AATAAA	-17	NA	123587732	123528484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123529294_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82548.nnic	chr6	-	1328	6	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49198	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	99.9811982324677	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTTGTATGTGGATAA	-123583221	True	NA	-9	True	AATAAA	-16	NA	123587711	123528680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123529294_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82551.nnic	chr6	-	833	5	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49080	-1792	at_least_one_novel_splicesite	FALSE	canonical	3	238	junction_1	23.2217570394662	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACATTTCATTTTATGT	NA	False	NA	NA	False	AATACA	-9	NA	123587829	123530505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_82555.nnic	chr6	-	1064	3	NNC	ENSG00000186439.14	novel	4627	41	NA	NA	49184	-40833	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	146	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTTAAGTATTTCTT	-123583235	True	NA	NA	False	ATTAAA	-21	NA	123587725	123569546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123570134_123570922_123571133_123587458
transcript_8256.nic	chr1	-	2743	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	104.080097360959	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-156728344	False	NA	-1	True	GATAAA	-21	NA	156728459	156721890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_82562.nnic	chr6	+	1480	9	NNC	ENSG00000111907.21	novel	1468	8	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.6093982930794	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTGAATTCTTAATTT	125151234	True	NA	4	True	ATTAAA	-15	NA	125153715	125263494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125252021_125252037_125253716_125253756_125257097_125257159_125258573_125258656_125262833
transcript_82563.known	chr6	+	1468	8	FSM	ENSG00000111907.21	ENST00000304877.17	1468	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.2301990363733	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	NA	False	NA	7	True	ATTAAA	-18	NA	125153648	125263497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125252021_125252037_125253716_125253756_125257097_125257159_125262833
transcript_82564.known	chr6	+	1308	6	FSM	ENSG00000111907.21	ENST00000368402.9	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	64.7722162659269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	125151251	True	NA	7	True	ATTAAA	-18	NA	125153732	125263497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125262833
transcript_82565.known	chr6	+	999	6	FSM	ENSG00000111907.21	ENST00000527711.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	68.8726360755852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTCTGTGTAATTCG	125151311	True	NA	NA	False	TTTAAA	-36	NA	125153792	125263226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125257097_125257159_125262833
transcript_82566.known	chr6	+	2147	5	FSM	ENSG00000111907.21	ENST00000368388.6	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	40.4250850339242	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	125151283	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_8257.known	chr1	-	2985	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	97.4896005849969	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	NA	False	NA	-5	True	GATAAA	-17	NA	156728766	156721894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
transcript_82575.nnic	chr6	-	803	5	NNC	ENSG00000111906.18	novel	1350	5	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_4	338.922557526052	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	NA	False	NA	-30	True	AATAAA	-21	NA	125302143	125275881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125302032
transcript_82576.known	chr6	-	1446	6	FSM	ENSG00000111906.18	ENST00000398153.7	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_4	218.357138651339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCTGCCTTTACATT	-125292970	True	NA	NA	False	GATAAA	-7	NA	125301967	125275349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125301848
transcript_82577.known	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	2	5	junction_2	9.28372231381357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125745422	True	NA	-2	True	AATAAA	-21	NA	125745610	125578557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
transcript_82580.nnic	chr6	-	1128	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	39091	-4	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125700981	False	NA	-2	True	AATAAA	-21	NA	125705937	125578557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_125578726_125645633_125645701_125705044
transcript_82581.nnic	chr6	-	481	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37617	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125702455	True	NA	-2	True	AATAAA	-21	NA	125707411	125578557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_125578726_125645633_125645701_125707165
transcript_82582.nnic	chr6	-	990	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	50	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATTTATTGAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	125707440	125681218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125681702_125694166_125694399_125707165
transcript_82584.nnic	chr6	-	2313	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_2	14.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGACCCCACATAGCCA	NA	False	NA	14	True	AAAACA	-30	NA	125707440	125687840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_82587.nnic	chr6	-	773	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	9	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-125702462	True	NA	NA	False	AATAAA	-18	NA	125707418	125701887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125702306_125705044_125705147_125707165
transcript_8259.nic	chr1	-	2998	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_3	110.200826776491	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-156728621	False	NA	-1	True	GATAAA	-21	NA	156728736	156721890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_82590.nnic	chr6	-	672	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-125702463	True	NA	NA	False	AATAAA	-18	NA	125707419	125701887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125702306_125707165
transcript_82595.known	chr6	+	765	6	FSM	ENSG00000111912.20	ENST00000417494.5	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.65513337649941	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATATTATGCACTGA	125790066	True	NA	NA	False	GATAAA	-7	NA	125790939	125881203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125791068_125815290_125815405_125855019_125855241_125874888_125874969_125878262_125878371_125881089
transcript_82596.known	chr6	+	3325	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.56195171219375	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	125955207	True	NA	16	True	AATAAA	-21	NA	125956769	125980244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_82608.known	chr6	+	2093	15	FSM	ENSG00000066651.20	ENST00000479748.5	2093	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	134.339578862596	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981459	True	NA	17	True	AATAAA	-22	NA	125986478	126039276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126008656_126008746_126009334_126009435_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_82619.nic	chr6	+	2377	14	NIC	ENSG00000066651.20	novel	2093	15	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_9	114.104125601531	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125986394	True	NA	17	True	AATAAA	-22	NA	125986422	126039276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126008656_126008746_126010924_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_82625.known	chr6	+	1889	13	FSM	ENSG00000066651.20	ENST00000368332.7	1889	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	99.2650772203173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981459	True	NA	17	True	AATAAA	-22	NA	125986478	126039276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021266_126038704
transcript_82627.known	chr6	+	1843	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_7	38.6465464893767	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981520	True	NA	17	True	AATAAA	-22	NA	125986539	126039276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_82632.nic	chr6	+	2014	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	91.102925614689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981500	True	NA	17	True	AATAAA	-22	NA	125986519	126039276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_125986774_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_82636.known	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_2	67	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	126317522	True	NA	91	True	AAGAAA	-2	NA	126340114	126348875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_126340400_126346204_126346319_126348465
transcript_82637.known	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	809.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	126317581	True	NA	21	True	ATTAAA	-17	NA	126340173	126348608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_126340445_126346204_126346319_126348465
transcript_82638.nic	chr6	+	2166	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_3	37.1618083521241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264359	True	NA	29	True	AATAAA	-20	NA	127266833	127288362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_127266926_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_82641.known	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.9552093756753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_82642.known	chr6	+	568	5	FSM	ENSG00000118518.17	ENST00000610162.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	38.7257988942772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACATGCTTCCTAC	127264408	True	NA	NA	False	NA	NA	NA	127266882	127286643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_82643.known	chr6	+	843	5	FSM	ENSG00000118518.17	ENST00000480444.1	843	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.0059519592164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGAGGAAATGGTGAAT	127264413	True	NA	NA	False	NA	NA	NA	127266887	127286903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127282286_127282396_127286049_127286178_127286615
transcript_82644.nic	chr6	+	2371	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	38.5129848233034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264376	True	NA	29	True	AATAAA	-20	NA	127266850	127288362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_82645.known	chr6	+	2267	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.8884444373331	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	127264374	True	NA	NA	False	AATAAA	-23	NA	127266848	127288567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
transcript_82646.known	chr6	+	884	4	FSM	ENSG00000118518.17	ENST00000476956.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.0724477007517	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGCAGCAAGTAGAG	127266679	False	NA	NA	False	NA	NA	NA	127266725	127286891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127286049_127286178_127286615
transcript_82647.nic	chr6	+	2160	4	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	36.3684845252956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264395	True	NA	29	True	AATAAA	-20	NA	127266869	127288362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_127267045_127280230_127280341_127286049_127286178_127286615
transcript_82649.known	chr6	+	2119	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	9	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	127264389	True	NA	NA	False	AATAAA	-18	NA	127266863	127288562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127266926_127280230_127280341_127286615
transcript_82650.known	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	13.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127286615
transcript_82651.known	chr6	+	610	3	FSM	ENSG00000118518.17	ENST00000489534.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCAGTACGATGAGCGC	127264408	True	NA	NA	False	AAGAAA	-6	NA	127266882	127286953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267045_127280230_127280341_127286615
transcript_82654.known	chr6	-	854	7	FSM	ENSG00000093144.19	ENST00000368292.10	854	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	278.446084946839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGAGCTATATTTG	-127343339	False	3761	NA	False	NA	NA	NA	127343359	127289987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127315933_127315975_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_82657.known	chr6	-	1009	7	FSM	ENSG00000093144.19	ENST00000430841.6	1009	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	280.191601111335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTTCGTGTGGATGT	-127343378	False	NA	-110	True	AATAAA	-4	NA	127343398	127289868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_82665.known	chr6	-	2585	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	276.494918578986	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	-127342855	False	NA	-1	True	AATAAA	-22	NA	127342875	127288711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
transcript_82666.known	chr6	-	2443	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	276.957758512016	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAACATTTTGTGTAA	-127343326	False	NA	-9	True	AATAAA	-14	NA	127343346	127288719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
transcript_82667.known	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	226.621799480986	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	-127343589	False	NA	-1	True	AATAAA	-22	NA	127343609	127288711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_82668.known	chr6	-	909	6	FSM	ENSG00000093144.19	ENST00000368289.6	909	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	296.09930766552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATAATTGGTTTTTCGT	-127343339	False	3761	-118	True	AAGAAA	-11	NA	127343359	127289876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_82677.known	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	269.517160863645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-127339801	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
transcript_8268.nic	chr1	-	1447	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-18	771	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	104.080097360959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTGTGTCCTGTGTCTG	-156728344	False	NA	-2	True	NA	NA	NA	156728459	156723186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_82680.known	chr6	-	1354	5	FSM	ENSG00000093144.19	ENST00000368291.6	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	253.109042706893	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCTGTCAATTCCA	-127339838	True	NA	-5	True	AATATA	-16	NA	127343599	127289633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127343335
transcript_82685.known	chr6	-	1449	4	FSM	ENSG00000093144.19	ENST00000528402.5	1449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	287.973378399231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-127343529	False	3761	NA	False	ACTAAA	-3	NA	127343549	127289266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127343335
transcript_82690.known	chr6	-	1966	4	FSM	ENSG00000093144.19	ENST00000368295.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	290.669342495329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCATAGATGTAAAAACTA	NA	False	NA	-51	True	NA	NA	NA	127331030	127288761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808
transcript_82696.nic	chr6	-	1575	4	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-101	178345	0	-6401	5prime_fragment	FALSE	canonical	3	135	junction_1	15.6418242755334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAACAAAACAAGAAA	NA	False	NA	NA	False	AAAAAG	-1	NA	128520616	128241780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_128242603_128322038_128322311_128397565_128397689_128520258
transcript_82697.known	chr6	-	1456	4	FSM	ENSG00000152894.15	ENST00000392449.4	1456	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	76.6043224774048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTTATGATTCTGTGA	NA	False	NA	NA	False	ATTAAA	-24	NA	128520565	128321402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_128322311_128397565_128397689_128491731_128491850_128520258
transcript_82698.known	chr6	-	563	4	FSM	ENSG00000152894.15	ENST00000532751.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.7860313081126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTACAATGAAGGAGAAC	NA	False	NA	NA	False	AAAAAG	-13	NA	128520599	128322250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_128322311_128397565_128397689_128409293_128409333_128520258
transcript_8270.known	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_2	6.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-156723522	True	NA	-1	True	GATAAA	-21	NA	156728435	156721890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156723463_156724147_156724349_156726905
transcript_82700.known	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	NA	False	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_128322311_128397565_128397689_128520258
transcript_82703.nic	chr6	-	742	2	ISM	ENSG00000152894.15	ENST00000525459.1	1722	3	-29	76264	0	-75054	5prime_fragment	FALSE	canonical	3	170	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAATAAAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	128520616	128397304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_128397689_128520258
transcript_82704.known	chr6	-	526	2	FSM	ENSG00000152894.15	ENST00000368202.4	526	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAATCGTTTATTTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	128520570	128518927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_128519142_128520258
transcript_82705.known	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	6.26335308255368	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-129709681	True	NA	4	True	AATAAA	-29	NA	129710177	129576131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_82707.known	chr6	-	2377	14	FSM	ENSG00000164483.17	ENST00000368134.6	2377	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2.54660697803798	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	-130365378	False	55	NA	False	AATAAA	-17	NA	130365425	130144314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130216570_130216617_130222693_130222814_130312977_130313094_130365119
transcript_82712.known	chr6	-	4247	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_17	45.3022147078865	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-131057556	True	NA	-3	True	AATAAA	-19	NA	131063322	130839346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_82717.known	chr6	+	2281	8	FSM	ENSG00000118507.18	ENST00000683794.1	2281	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.57462633149488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131134861	True	NA	6	True	AATAAA	-17	NA	131135466	131283532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131135783_131145284_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131282398
transcript_82721.nnic	chr6	+	2211	3	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	3.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131199562	True	NA	6	True	AATAAA	-17	NA	131199911	131283532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131199972_131219660_131219809_131281529
transcript_82722.nnic	chr6	+	1653	3	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-390	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	34	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	6	True	AATAAA	-17	NA	131199600	131283532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131199972_131219660_131219809_131282398
transcript_82723.known	chr6	+	1006	3	FSM	ENSG00000118507.18	ENST00000537868.5	1006	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	38.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTTTGGGATTTT	131199641	True	NA	NA	False	NA	NA	NA	131199990	131283184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131200063_131219660_131219809_131282398
transcript_82724.known	chr6	+	670	3	FSM	ENSG00000118507.18	ENST00000474850.2	670	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATGGCCCAAGTTTCA	131250040	True	NA	NA	False	AAGAAA	-42	NA	131250429	131281943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131250617_131253036_131253106_131281529
transcript_82725.known	chr6	+	2461	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	6	True	AATAAA	-17	NA	131250158	131283532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131250617_131281529
transcript_82726.known	chr6	+	1447	8	FSM	ENSG00000118520.15	ENST00000368087.8	1447	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTGTGTCTACATATT	NA	False	NA	NA	False	AATAAA	-16	NA	131573225	131584329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131573340_131576662_131576736_131579110_131579286_131581218_131581379_131582620_131582716_131583059_131583165_131583354_131583492_131583741
transcript_82727.known	chr6	-	5247	29	FSM	ENSG00000112282.18	ENST00000368068.8	5247	29	0	0	0	0	multi-exon	TRUE	canonical	2	84	junction_21	31.9542681828585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-131626589	False	NA	-4	True	AATAAA	-20	NA	131628242	131586731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_82730.nic	chr6	-	1910	9	ISM	ENSG00000112282.18	ENST00000539158.1	1636	15	-177	15166	5	9496	5prime_fragment	FALSE	canonical	3	84	junction_1	9.97496867163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTAATGCCGTAACTG	-131626584	True	NA	NA	False	AAGAAA	-11	NA	131628237	131617464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_82731.nnic	chr6	-	1863	3	Antisense	novelGene_ENSG00000236673.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCAAATATTTTCAGA	-131904481	True	NA	NA	False	ATTAAA	-17	NA	131904583	131882136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_131883359_131895151_131895278_131904068
transcript_82745.nnic	chr6	+	1190	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-299	-155	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	163	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	131901650	False	NA	4	True	ATTAAA	-15	NA	131901663	131907375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131903946_131904235_131906961
transcript_82748.nnic	chr6	+	2821	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-102	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	189	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACTTGTATGTTCATT	131901654	False	NA	120	True	AATAAA	-20	NA	131901860	131920566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131903946_131904235_131918324
transcript_82749.nnic	chr6	+	2770	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-180	-3	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	131901772	False	NA	116	True	AATAAA	-16	NA	131901782	131920562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_82750.nnic	chr6	+	2582	3	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-107	-1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	37.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCACTTGTATGTTCA	131901649	False	NA	118	True	AATAAA	-18	NA	131901855	131920564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131910784_131910956_131918449
transcript_82754.nnic	chr6	+	2527	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	75	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	131901719	False	NA	116	True	AATAAA	-16	NA	131901896	131920562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131904075_131904235_131918449
transcript_82757.nnic	chr6	+	2470	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	73.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	131901719	False	NA	116	True	AATAAA	-16	NA	131901896	131920562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131904132_131904235_131918449
transcript_82758.nnic	chr6	+	771	2	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-163	-153	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	131901789	False	NA	6	True	ATTAAA	-17	NA	131901799	131907377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131906958
transcript_82759.known	chr6	+	2305	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901785	False	NA	119	True	AATAAA	-19	NA	131901962	131920565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131902152_131918449
transcript_8276.nic	chr1	-	972	6	NIC	ENSG00000143314.12	novel	883	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_5	152.423882643108	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	-156736877	True	NA	-11	True	AATAAA	-17	NA	156741096	156737302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156740930
transcript_82768.known	chr6	-	15845	10	FSM	ENSG00000079950.14	ENST00000367941.7	15845	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	15.8962686824516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCATTTTTACATTTT	-132508613	True	NA	NA	False	TATAAA	-23	NA	132513116	132445866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_132460851_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_8277.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	104.296883941947	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	-156736869	True	NA	-11	True	AATAAA	-17	NA	156741088	156737302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
transcript_82779.known	chr6	-	1090	10	FSM	ENSG00000079950.14	ENST00000367937.4	1090	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	64.4187688315896	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTGAATGTAGTT	NA	False	NA	NA	False	NA	NA	NA	132513198	132461713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_132461861_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_8278.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	111.433208694715	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	-156736912	True	NA	-13	True	AATAAA	-15	NA	156741131	156737304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
transcript_82783.nic	chr6	-	2556	15	NIC	ENSG00000146409.12	novel	2421	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	88.7069527680201	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794700	True	NA	-2	True	AATAAA	-21	NA	132798660	132769369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132790784_132790866_132796981_132797122_132798413
transcript_82789.known	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	26.6642503836262	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794677	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
transcript_82810.known	chr6	+	503	6	FSM	ENSG00000112306.8	ENST00000230050.4	503	6	0	0	0	0	multi-exon	FALSE	canonical	3	6209	junction_1	1227.01106759475	59100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	132736038	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_132814614_132814731_132814783_132814971_132815089_132816460_132816564_132816959_132817062_132817479
transcript_82815.known	chr6	+	639	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	3354.58281161756	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	132736038	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
transcript_82850.known	chr6	+	1280	2	FSM	ENSG00000118526.7	ENST00000367882.5	1280	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGATATTTGGAGTGAT	133889072	True	NA	NA	False	AATAAA	-22	NA	133889112	133892257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_133889848_133891712
transcript_82855.known	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	56.6237582645306	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	133949186	True	NA	10	True	AATAAA	-22	NA	133953223	133990432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_82859.known	chr6	+	808	6	FSM	ENSG00000028839.10	ENST00000367871.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	60.0779493658031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTCATACCAAGATAGA	133949157	True	NA	NA	False	NA	NA	NA	133953194	133984723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576
transcript_82862.known	chr6	-	5572	5	FSM	ENSG00000146411.6	ENST00000275230.6	5572	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.1650635094611	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTGCATAGATTTTAAA	-134052426	True	NA	NA	False	AATACA	-38	NA	134052624	133987580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_133991309_134001996_134002130_134006811_134006935_134028380_134029722_134052377
transcript_82864.known	chr6	-	2401	12	FSM	ENSG00000118515.12	ENST00000237305.11	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	10.5525054797819	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTGTCATGTGTT	-134174818	False	NA	-4	True	AATAAA	-18	NA	134174896	134169251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_82866.known	chr6	-	573	5	FSM	ENSG00000118515.12	ENST00000532856.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5.11737237261468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTCATTTTCCTAGGAG	-134174303	True	NA	NA	False	ACTAAA	-5	NA	134174861	134173171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_82868.known	chr6	-	7087	18	FSM	ENSG00000112339.15	ENST00000367837.10	7087	18	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_7	53.1567506381673	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGTAAAAAGAGAATAT	-135045548	True	NA	NA	False	NA	NA	NA	135054822	134960377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_82872.known	chr6	-	2703	17	FSM	ENSG00000112339.15	ENST00000367826.6	2703	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	166.718700210864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTGTGTTTTGTT	-135045545	True	NA	-23	True	AATAAA	-19	NA	135054819	134964632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135050581_135050648_135054648
transcript_82885.known	chr6	-	2793	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	338.35890707945	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCATGTTCTTTGA	-135045610	True	NA	0	True	AATAAA	-22	NA	135054884	135035856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_82886.known	chr6	-	638	5	FSM	ENSG00000112339.15	ENST00000367820.6	638	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	358.692329859449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATAGTAGACAAGTTCA	-135045526	True	NA	NA	False	NA	NA	NA	135054800	135036695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135036795_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_82892.nic	chr6	-	1313	8	ISM	ENSG00000135541.22	ENST00000265602.11	6063	29	-35	179605	0	0	5prime_fragment	FALSE	canonical	3	12	junction_6	27.2681319567029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495827	True	NA	NA	False	AAAAAG	-2	NA	135497775	135463136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_82893.known	chr6	-	5549	28	FSM	ENSG00000135541.22	ENST00000457866.6	5549	28	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	18.50110292193	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGCTAATAATTTTGA	-135495817	True	NA	NA	False	AATAAA	-19	NA	135497765	135283985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_82894.nic	chr6	-	1097	7	ISM	ENSG00000135541.22	ENST00000680561.1	7890	27	-158	181874	0	-2723	5prime_fragment	FALSE	canonical	3	12	junction_5	29.2973263854116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAGAAAAAGGAAGTT	-135495827	True	NA	NA	False	NA	NA	NA	135497775	135465859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_82895.nic	chr6	-	1173	6	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-57	68815	-1	0	5prime_fragment	FALSE	canonical	3	35	junction_5	21.0902821223425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495834	True	NA	NA	False	AAAAAG	-2	NA	135497782	135463136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_82898.known	chr6	-	1074	5	FSM	ENSG00000135541.22	ENST00000524469.5	1074	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33.2142665130513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495789	True	NA	NA	False	AAAAAG	-2	NA	135497737	135463136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135463307_135465813_135466374_135490622_135490748_135492227_135492292_135497582
transcript_82899.nic	chr6	-	957	5	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-57	71538	-1	-2723	5prime_fragment	FALSE	canonical	3	35	junction_4	21.3248681121361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAGAAAAAGGAAGTT	-135495834	True	NA	NA	False	NA	NA	NA	135497782	135465859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_8290.nic	chr1	+	2482	8	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-318	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	497.450561588275	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	NA	False	NA	18	True	AATAAA	-18	NA	156767216	156800815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156791066_156791163_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_82900.known	chr6	-	719	5	FSM	ENSG00000135541.22	ENST00000680968.1	719	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.5661660009004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATAGTTTTTTTTTTTTT	-135495795	True	NA	NA	False	AATAAA	-20	NA	135497743	135489918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135490226_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_82910.nnic	chr6	-	1414	9	NNC	ENSG00000146410.12	novel	1789	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	39.4905051879563	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-136249357	True	NA	-6	True	AATAAA	-14	NA	136250335	136231033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_136231389_136233324_136233500_136239465_136239617_136239727_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_82912.known	chr6	-	1586	9	FSM	ENSG00000146410.12	ENST00000367784.6	1586	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	45.1260387692073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTGTAGCAACCA	-136249314	True	NA	-2	True	AATAAA	-18	NA	136250292	136231029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136247460_136247561_136249036_136249154_136250263
transcript_82914.known	chr6	-	1789	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	20.6930926067771	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-136249333	True	NA	-6	True	AATAAA	-14	NA	136250311	136231033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
transcript_82915.known	chr6	-	1524	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	26.1627558930317	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTAGCAACCAAAATTC	-136249346	True	NA	4	True	AATAAA	-24	NA	136250324	136231023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_82918.known	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	194.528204181867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	-136274102	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_82919.known	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	193.004371712145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	-136274116	True	NA	NA	False	NA	NA	NA	136289795	136259690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_82925.known	chr6	-	3167	13	FSM	ENSG00000029363.17	ENST00000530429.5	3167	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	320.527549084665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACCATATTTGTAACTA	-136274105	True	NA	-29	True	AATAAA	-14	NA	136289784	136260901	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269140_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_82926.known	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	174.904885604332	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-136274150	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_82933.known	chr6	-	2423	9	FSM	ENSG00000029363.17	ENST00000529826.5	2423	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	244.439377709484	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATTACAAGGAATACA	-136274165	True	NA	0	True	AAGAAA	-16	NA	136289844	136269475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136269613_136271994_136272077_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_82935.nic	chr6	-	2290	8	ISM	ENSG00000029363.17	ENST00000628517.2	2512	10	5	2732	0	-77	5prime_fragment	FALSE	canonical	3	616	junction_4	58.6629946284326	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTTTTGAATGTAAT	-136274167	True	NA	NA	False	AAGAAA	-8	NA	136289846	136271995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_82937.nic	chr6	-	1685	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-2	6612	0	-533	5prime_fragment	FALSE	canonical	3	616	junction_1	71.2894627557257	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGACAAAAATTCTGA	-136274167	True	NA	-23	True	NA	NA	NA	136289846	136276087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_82941.known	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_12	63.8090251884616	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	-136540034	True	NA	-29	True	AATAAA	-19	NA	136550422	136342733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_82945.known	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	138.617222504998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	NA	False	NA	NA	False	NA	NA	NA	136550819	136342280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_82955.known	chr6	-	1948	7	FSM	ENSG00000027697.15	ENST00000645753.1	1948	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.7674811318899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215444	False	3678	-15	True	AATAAA	-3	NA	137219122	137197496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219093
transcript_82956.known	chr6	-	2074	7	FSM	ENSG00000027697.15	ENST00000367739.9	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	25.0161059230959	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	-137215707	True	NA	-3	True	AATAAA	-15	NA	137219385	137197484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219242
transcript_82958.known	chr6	-	4198	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGAGCATGCGTG	-138097138	True	NA	NA	False	AATAAA	-15	NA	138107419	138088504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138092269_138096353_138096495_138107126
transcript_82959.known	chr6	+	10010	4	FSM	ENSG00000051620.11	ENST00000607197.6	10010	4	0	0	0	0	multi-exon	TRUE	canonical	3	951	junction_3	84.0092587489948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGTCTTTTTTAG	138404141	True	NA	NA	False	ATTAAA	-18	NA	138404222	138422197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_138404598_138405144_138405281_138405970_138406152_138412879
transcript_82960.nic	chr6	+	911	3	ISM	ENSG00000051620.11	ENST00000607197.6	10010	4	603	9043	579	0	3prime_fragment	FALSE	canonical	3	951	junction_2	102.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCTAGTGTCTTCT	138404814	False	NA	15	True	AGTAAA	-1	NA	138404825	138413154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_138405281_138405970_138406152_138412879
transcript_82961.known	chr6	+	1247	6	FSM	ENSG00000024862.18	ENST00000617445.5	1247	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	15.5306149266537	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTCTGTTTTGAA	138772394	True	NA	9	True	AATAAA	-19	NA	138773768	138793319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792748
transcript_82962.nnic	chr6	+	995	6	NNC	ENSG00000024862.18	novel	1247	6	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.0018181517666	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTCTGTTGTCTGTTTT	138772397	True	NA	6	True	AATAAA	-16	NA	138773771	138793316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792994
transcript_82964.known	chr6	-	3161	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	68.8587216386303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGGAGGGTAGATTGT	-138985648	True	NA	-15	True	AATAAA	-16	NA	138988261	138904869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_82965.known	chr6	-	2468	19	FSM	ENSG00000135597.19	ENST00000529597.5	2468	19	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_8	84.8422646830175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGATTGTGTTTGTTGG	-138987624	False	NA	-6	True	AATAAA	-25	NA	138987640	138904860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_8297.known	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_3	113.643692692947	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757665	True	NA	18	True	AATAAA	-18	NA	156767534	156800815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_82973.known	chr6	+	782	3	FSM	ENSG00000146386.8	ENST00000367660.4	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_2	22.5	1033	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	139013370	True	NA	32	True	AATAAA	-23	NA	139028744	139043302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_139028876_139034154_139034222_139042718
transcript_82976.known	chr6	-	1732	4	FSM	ENSG00000238099.3	ENST00000454788.3	1732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTGACTCCGAAGAAT	-139474624	False	NA	NA	False	AATAAA	-40	NA	139474638	139468994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_139470461_139472526_139472596_139472931_139473056_139474565
transcript_82977.known	chr6	-	665	3	FSM	ENSG00000234147.3	ENST00000683841.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	-140898388	True	NA	NA	False	CATAAA	-18	NA	140898411	140845957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_140846305_140852818_140852913_140898187
transcript_82980.known	chr6	+	6991	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	0	0	0	multi-exon	FALSE	canonical	3	1128	junction_3	75.4869903644708	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTCTATTATATCAT	142137800	True	NA	NA	False	AATAAA	-16	NA	142147262	142224685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_82984.known	chr6	+	3272	7	FSM	ENSG00000009844.16	ENST00000620996.4	3272	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	412.423090473309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGGCTCTCCGAGTG	NA	False	NA	2	True	AATAAA	-16	NA	142147161	142220946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142218497
transcript_82992.nnic	chr6	+	1491	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-4	14	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	80.3604725941526	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	143059971	False	NA	5	True	AATAAA	-18	NA	143060848	143340304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
transcript_82994.known	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	23.3888862496699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	143058864	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_83000.nnic	chr6	+	1020	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	-4	-272	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	83.429611050274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAGAAATATGTTAAA	143059971	False	NA	6	True	AATAAA	-16	NA	143060848	143340018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143339638
transcript_83001.nnic	chr6	+	1306	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	-4	14	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	83.429611050274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	143059971	False	NA	5	True	AATAAA	-18	NA	143060848	143340304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143339638
transcript_83006.known	chr6	+	3393	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	88.1400400877301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	143058876	True	NA	NA	False	AATAAA	-26	NA	143060900	143190597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
transcript_83008.nic	chr6	+	718	3	NIC	ENSG00000146416.19	novel	559	2	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	74.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	NA	False	NA	22	True	AATAAA	-27	NA	143060448	143061606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_143060654_143060946_143061067_143061213
transcript_83009.nnic	chr6	+	762	3	NNC	ENSG00000146416.19	novel	559	2	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	69	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	143060403	True	NA	22	True	AATAAA	-27	NA	143060488	143061606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_143060738_143060946_143061067_143061213
transcript_8301.nic	chr1	+	1973	6	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	443.570332641848	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757664	True	NA	18	True	AATAAA	-18	NA	156767533	156800815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156794664_156794809_156797275_156797342_156800373
transcript_83010.known	chr6	+	559	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	143058876	True	NA	22	True	AATAAA	-27	NA	143060900	143061606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143061213
transcript_83011.nic	chr6	+	2292	2	ISM	ENSG00000146416.19	ENST00000629020.2	3636	4	-50	51689	-4	-48906	5prime_fragment	FALSE	canonical	3	225	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAAACATGAGTATAGT	143059971	False	NA	NA	False	NA	NA	NA	143060848	143138908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_143061067_143136834
transcript_83012.known	chr6	+	3064	6	FSM	ENSG00000146416.19	ENST00000646199.1	3064	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	78.0497277381542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACCCTGAACCTGAC	143059976	False	NA	-9	True	AATAAA	-4	NA	143060853	143340290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143337977
transcript_83024.known	chr6	-	6244	6	FSM	ENSG00000189007.16	ENST00000237283.9	6244	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	34.7701020993612	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTAAAATATTATTT	-143448287	True	NA	-13	True	AATAAA	-23	NA	143450695	143422831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_143428507_143428611_143428685_143432504_143432612_143433830_143433982_143438589_143438695_143450562
transcript_83029.known	chr6	+	2750	12	FSM	ENSG00000034693.15	ENST00000367591.5	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_11	33.5352287937317	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATGGATTGGAATT	143449573	True	NA	NA	False	AATAAA	-20	NA	143450804	143490616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143451116_143459084_143459217_143462915_143462998_143468121_143468166_143470960_143471086_143471382_143471450_143471556_143471612_143472159_143472329_143474785_143474857_143479075_143479199_143485151_143485249_143489142
transcript_8303.known	chr1	-	2309	6	FSM	ENSG00000143321.19	ENST00000357325.10	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	1328	junction_4	25.2618289124125	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATTCTGACTGATTC	-156723092	True	NA	-6	True	AATAAA	-16	NA	156751675	156742108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
transcript_83041.known	chr6	-	2385	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_3	61.3124964605277	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATATTTTCTTTCTTC	-143506188	True	NA	NA	False	CATAAA	-18	NA	143511720	143494811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
transcript_83046.nnic	chr6	-	1512	6	NIC	ENSG00000001036.14	novel	2385	7	NA	NA	-13	-675	combination_of_known_splicesites	FALSE	canonical	2	14	junction_3	258.194965094209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCCATGTGTGACTC	-143506201	True	NA	-16	True	ATTAAA	-16	NA	143511733	143495486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_143495848_143497388_143497498_143501931_143502123_143503912_143504253_143507236_143507425_143511410
transcript_8305.known	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	535.78376235194	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-156751769	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
transcript_83051.known	chr6	+	4367	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.4850849425144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	143665870	True	NA	NA	False	ATTAAA	-15	NA	143677982	143826177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_83054.known	chr6	+	2569	13	FSM	ENSG00000112419.15	ENST00000440869.7	9633	13	0	7064	0	-43	multi-exon	FALSE	canonical	0	0	junction_11	66.2547168132202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAATTGAA	143665852	True	NA	NA	False	AAGAAA	-24	NA	143677964	143824121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_83057.known	chr6	+	358	2	FSM	ENSG00000112419.15	ENST00000545919.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGAGTTCTGATTTG	143666060	False	NA	NA	False	AATAAA	-14	NA	143678172	143712336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143678210_143712015
transcript_8306.known	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	530.589483499249	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-156752307	True	NA	NA	False	NA	NA	NA	156752448	156743344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
transcript_83061.known	chr6	+	1853	11	FSM	ENSG00000135521.9	ENST00000367576.6	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	27.2838780234775	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	143839225	True	NA	12	True	ATTAAA	-24	NA	143843337	143863812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_8308.nic	chr1	-	1235	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2689	0	-34	0	3prime_fragment	FALSE	canonical	3	23	junction_1	5.61248608016091	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-156813330	True	NA	-9	True	AATAAA	-30	NA	156814145	156806242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
transcript_83083.known	chr6	-	690	1	FSM	ENSG00000169976.7	ENST00000367569.4	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGGTGTGAACTTTC	-144077215	True	NA	-7	True	CATAAA	-17	NA	144095573	144094883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_144094900_144095600
transcript_83084.known	chr6	+	3220	25	FSM	ENSG00000152818.19	ENST00000367526.8	3220	25	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	23.3273429810503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGGCCAACCAATGTTT	144583174	False	NA	NA	False	NA	NA	NA	144583209	144851003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_144583601_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
transcript_83085.nic	chr6	+	999	2	ISM	ENSG00000152818.19	ENST00000433557.1	354	3	-419	110989	-53	-110989	5prime_fragment	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTTTCTATTTTCT	144281220	True	NA	NA	False	AATAAA	-12	NA	144285281	144292195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_144285822_144291736
transcript_83086.known	chr6	-	2118	5	FSM	ENSG00000112425.16	ENST00000638717.1	2118	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.256095748383	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAGCAAGACATTCT	-145735237	False	210	NA	False	NA	NA	NA	145735281	145382534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_145384098_145502521_145502576_145635244_145635487_145686121_145686297_145735197
transcript_83091.nic	chr6	-	1832	10	NIC	ENSG00000146414.17	novel	5245	24	NA	NA	-8	1937	combination_of_known_junctions	FALSE	canonical	2	17	junction_8	15.3911951741536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGTCAACCATTTAT	-145964062	False	NA	NA	False	AGTAAA	-34	NA	145964105	145943622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145963730
transcript_83093.known	chr6	-	7596	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_29	15.316013240832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-145963346	True	NA	NA	False	AATAAA	-21	NA	145964358	145884806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
transcript_83094.nic	chr6	-	1992	9	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	31	58816	0	1937	5prime_fragment	FALSE	canonical	3	43	junction_8	9.02773504263389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGTCAACCATTTAT	-145963346	True	NA	NA	False	AGTAAA	-34	NA	145964358	145943622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_83097.known	chr6	-	9051	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGCTTTTGTATT	-145810104	True	NA	NA	False	AATAAA	-16	NA	145814795	145793501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_145800310_145804371_145806422_145814602
transcript_83100.known	chr6	-	1466	1	FSM	ENSG00000228283.3	ENST00000562413.2	1466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCCCACTGACAGTT	NA	False	NA	NA	False	TTTAAA	-18	NA	146803824	146802358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_146802400_146803800
transcript_83101.known	chr6	+	406	3	FSM	ENSG00000227681.5	ENST00000432506.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTGTTTCAGTACATA	147660717	False	NA	21	True	AATAAA	-37	NA	147660736	147737556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_147660820_147733728_147733812_147737316
transcript_83109.known	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	27.147232312378	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-149538772	True	NA	NA	False	NA	NA	NA	149546043	149504494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_8312.known	chr1	-	1539	4	FSM	ENSG00000117036.12	ENST00000326786.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGTGTACTGTACAG	-157138454	False	NA	NA	False	AATAAA	-23	NA	157138474	157133144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_157134228_157135470_157135709_157136306_157136366_157138315
transcript_83121.known	chr6	+	1943	8	FSM	ENSG00000055211.14	ENST00000367419.10	1943	8	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_7	3.61403161162101	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	149564253	True	NA	29	True	AATAAA	-29	NA	149566374	149591748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580592_149580724_149582439_149582604_149590726
transcript_83133.nnic	chr6	-	2181	11	NNC	ENSG00000186625.14	novel	1898	11	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_10	49.4833305265521	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645690	True	NA	0	True	AATAAA	-23	NA	149648649	149594872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648120
transcript_83134.known	chr6	-	1898	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	17.4802745973855	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645755	True	NA	0	True	AATAAA	-23	NA	149648714	149594872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_83139.nnic	chr6	-	1760	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	55.022778672469	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645792	True	NA	0	True	AATAAA	-23	NA	149648751	149594872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149648468
transcript_83141.nnic	chr6	-	1739	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	57.340654140705	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645755	True	NA	0	True	AATAAA	-23	NA	149648714	149594872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_83149.known	chr6	-	2567	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10.2740233382816	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCATTTTATTTTAGT	-149713907	True	NA	-12	True	AATAAA	-18	NA	149718105	149682918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
transcript_8316.known	chr1	+	3607	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	13.6585341656986	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	158177864	True	NA	NA	False	AATAAA	-20	NA	158178029	158186427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_83170.known	chr6	+	1938	8	FSM	ENSG00000120265.19	ENST00000367384.7	1938	8	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_7	375.391931240958	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749398	False	NA	NA	False	AATAAA	-19	NA	149749442	149811420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802370_149810615
transcript_83172.known	chr6	+	1686	8	FSM	ENSG00000120265.19	ENST00000464889.7	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_7	502.892165988142	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	149734563	True	NA	NA	False	AATAAA	-18	NA	149749740	149811419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_83177.known	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_6	18.9208879284245	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-149735792	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
transcript_83180.known	chr6	+	1293	7	FSM	ENSG00000120265.19	ENST00000367378.6	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_4	88.3421379259826	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGTCTGCCCTTATTT	149749399	False	NA	22	True	ATTAAA	-15	NA	149749443	149802530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199
transcript_83183.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	749.536449339783	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_83187.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000367380.9	1628	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	762.333132925203	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_83192.known	chr6	-	1883	4	FSM	ENSG00000218358.3	ENST00000533735.2	1905	4	22	0	13	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTGACTTTGGAATTT	-150005073	False	NA	NA	False	AATAAA	-20	NA	150005144	149998018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149998885_150000065_150000195_150000852_150001669_150005072
transcript_83194.nic	chr6	+	846	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	152.333951084652	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150866134	True	NA	34	True	ATTAAA	-40	NA	150866507	150899021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
transcript_83195.nic	chr6	+	843	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	155.228731823955	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150866134	True	NA	34	True	ATTAAA	-40	NA	150866507	150899021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_83197.nic	chr6	+	4356	2	ISM	ENSG00000131016.17	ENST00000359755.5	6190	3	8758	0	8742	0	3prime_fragment	FALSE	canonical	3	458	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTGGTTTTATTAG	151350430	False	NA	15	True	AATAAA	-16	NA	151350443	151356773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_151353753_151355726
transcript_83198.known	chr6	-	3103	3	FSM	ENSG00000181472.5	ENST00000325144.5	3103	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATGTCATCTCT	-151390468	True	NA	-9	True	AATAAA	-19	NA	151391559	151364114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151366893_151373464_151373650_151391419
transcript_8320.known	chr1	+	3739	9	FSM	ENSG00000162706.13	ENST00000368125.9	3739	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4.98591766879478	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTGTTCACTTCCT	159171432	True	NA	NA	False	AATATA	-14	NA	159171614	159203313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159171854_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_83201.known	chr6	-	1881	13	FSM	ENSG00000155906.20	ENST00000682392.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	65.2444122767102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGACTCAGTCTCAA	-151448743	True	NA	-70	True	NA	NA	NA	151452146	151404906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151405268_151405719_151405837_151417080_151417139_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_83203.known	chr6	-	1948	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	19.3382248965297	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATCTACATCACT	-151448723	True	NA	-14	True	AATAAA	-16	NA	151452126	151404761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_83204.nic	chr6	-	1959	12	NIC	ENSG00000155906.20	novel	1716	13	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	47.9907015787072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	151452203	151404853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151445307_151445826_151452015
transcript_83207.known	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	47.5936970616909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-151448755	True	NA	-47	True	NA	NA	NA	151452158	151404883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
transcript_83211.nic	chr6	-	1413	11	NIC	ENSG00000155906.20	novel	1413	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	63.5758601986635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	-151448772	True	NA	-17	True	AATAAA	-27	NA	151452175	151404853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151452015
transcript_83214.known	chr6	-	1773	11	FSM	ENSG00000155906.20	ENST00000646926.2	1773	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	53.6642338993114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTCAGTCTCAAAAATAA	-151448752	True	NA	-64	True	NA	NA	NA	151452155	151404900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_8322.known	chr1	+	694	3	FSM	ENSG00000158716.9	ENST00000368108.7	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	271	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	159772823	True	NA	37	True	AATAAA	-19	NA	159780959	159782543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159780994_159781098_159781368_159782152
transcript_83221.known	chr6	-	841	3	FSM	ENSG00000155906.20	ENST00000491268.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTATAGGATCATTA	-151448615	False	NA	NA	False	ATTAAA	-44	NA	151452018	151436234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151436555_151445307_151445826_151452015
transcript_83224.known	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	820	junction_4	36.503424496888	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	151445292	True	NA	9	True	AATAAA	-18	NA	151452465	151470101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
transcript_83227.known	chr6	+	712	4	FSM	ENSG00000146476.11	ENST00000494826.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	401.63360859813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGGATTTGAGCTTG	151445312	True	NA	NA	False	AAAAAG	-32	NA	151452485	151468542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_151452587_151458327_151458573_151464452_151464619_151468342
transcript_83228.known	chr6	-	647	4	FSM	ENSG00000131018.25	ENST00000537033.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTCTACGAAGATGGAG	-152301992	True	NA	NA	False	NA	NA	NA	152302136	152293679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152293750_152293959_152294128_152300640_152300782_152301868
transcript_83232.known	chr6	-	3651	7	FSM	ENSG00000112031.16	ENST00000464135.5	3651	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	50.261538199922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_83234.known	chr6	-	3539	6	FSM	ENSG00000112031.16	ENST00000367231.9	3539	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	65.2674497739876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_83235.known	chr6	-	2054	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_4	9.97496867163	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGCTTAATGTATACC	-152978202	True	NA	-17	True	AATAAA	-16	NA	152983041	152970534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
transcript_83237.known	chr6	-	2221	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	125.874937934443	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTATACCTTTTAT	-152982803	True	NA	-11	True	AATAAA	-22	NA	152983579	152970528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
transcript_83239.known	chr6	+	2090	3	FSM	ENSG00000227627.4	ENST00000637995.1	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGCGGTGGCTCACA	152983143	True	NA	NA	False	ATTAAA	-6	NA	152983330	152990541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152983488_152987955_152988023_152988675
transcript_83240.known	chr6	+	3246	3	FSM	ENSG00000227627.4	ENST00000671635.1	3246	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGTTACGAGAATT	152983482	True	NA	NA	False	NA	NA	NA	152983718	152991322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152984251_152987955_152988023_152988675
transcript_83242.known	chr6	+	1478	3	FSM	ENSG00000227627.4	ENST00000654706.2	1512	3	33	1	7	-1	multi-exon	FALSE	canonical	3	8	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCGTCTTGTTTATTCT	152983489	True	NA	3	True	CATAAA	-14	NA	152983725	152990006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152983806_152987955_152988023_152988675
transcript_83244.known	chr6	+	663	3	FSM	ENSG00000227627.4	ENST00000442269.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAATTATCCCTGTTCA	152983513	True	NA	NA	False	NA	NA	NA	152983749	152989223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152983806_152987955_152988015_152988675
transcript_83246.nnic	chr6	-	1551	5	NNC	ENSG00000091844.8	novel	7932	5	NA	NA	41	-6425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.0312256240101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAGAAGGAAAAAAGCAC	-153129439	True	NA	NA	False	AAAACA	-15	NA	153131241	153010883	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131038
transcript_83247.known	chr6	-	7932	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	4.82182538049648	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGAAAGTTACTGTTT	-153129480	True	NA	-7	True	AATAAA	-16	NA	153131282	153004458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_83249.known	chr6	-	447	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGCATGGAGGGAGTTTC	-153279188	False	NA	-51	True	NA	NA	NA	153282733	153282286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_153282300_153282700
transcript_8325.known	chr1	+	797	2	FSM	ENSG00000158716.9	ENST00000368107.2	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	159772825	True	NA	37	True	AATAAA	-19	NA	159780961	159782543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159781368_159782152
transcript_83250.known	chr6	+	1161	2	FSM	ENSG00000287260.1	ENST00000658375.1	1161	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGATGAGTTTACCA	154510746	True	NA	NA	False	AATAAA	-23	NA	154510790	154522307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_154510963_154521318
transcript_83251.nic	chr6	-	1148	7	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	185.921130231791	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	-155311186	True	NA	NA	False	AATAAA	-26	NA	155314526	155257652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_83255.known	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	34.6217657935968	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-155311144	True	NA	-8	True	AATAAA	-20	NA	155314484	155256133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_8326.nnic	chr1	-	1854	12	Fusion	ENSG00000213085.10_ENSG00000158710.15	novel	1844	12	NA	NA	-22	0	multi-exon	FALSE	canonical	0	0	junction_3	1.31110955471418	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGCTTGGCTTTCTTG	-159920800	True	NA	NA	False	ATTAAA	-16	NA	159925529	159872363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_-_159872564_159872943_159873169_159876555_159876750_159877348_159877463_159880553_159880701_159884435_159884566_159886510_159886690_159887840_159888012_159888351_159888497_159890479_159890623_159893179_159893306_159925449
transcript_83265.known	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	281.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-155311144	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_155257909_155311331_155311340_155314295
transcript_83266.known	chr6	-	4322	4	FSM	ENSG00000215712.11	ENST00000400788.9	4322	4	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_1	23.1132477644796	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATAAAGCTCATTCTT	-157319127	True	NA	NA	False	ATTAAA	-15	NA	157323519	157289024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_157293000_157318781_157318920_157322704_157322806_157323411
transcript_83270.known	chr6	-	3936	17	FSM	ENSG00000122335.17	ENST00000647468.2	3936	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.26490131520032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTTCATTGTACAA	-158166688	True	NA	-18	True	AATAAA	-15	NA	158168262	158109518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_83273.known	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	6.50274667242345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-158166706	True	NA	NA	False	NA	NA	NA	158168280	158114592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_83275.nic	chr6	-	1486	6	ISM	ENSG00000122335.17	ENST00000367101.5	1907	16	-16	31189	0	0	5prime_fragment	FALSE	canonical	3	85	junction_3	3.42928563989645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATATCTTCTCTGGTTAT	-158166701	True	NA	NA	False	AATAAA	-17	NA	158168275	158145919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_83276.nic	chr6	-	994	6	ISM	ENSG00000122335.17	ENST00000367101.5	1907	16	-16	31681	0	458	5prime_fragment	FALSE	canonical	3	85	junction_3	3.42928563989645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAAGG	-158166701	True	NA	NA	False	NA	NA	NA	158168275	158146411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_83279.known	chr6	+	1102	4	FSM	ENSG00000272047.4	ENST00000648328.1	1102	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	301.69889330626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAACAGAGAGACCCTG	158161866	True	NA	NA	False	AAAACA	-17	NA	158168349	158192881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158168396_158170469_158170539_158187039_158187122_158191976
transcript_83282.known	chr6	+	7483	3	FSM	ENSG00000272047.4	ENST00000607778.2	7483	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_1	122.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCACAGCCTGTTTT	158161866	True	NA	NA	False	AATAAA	-17	NA	158168349	158199344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158168396_158170469_158170539_158191976
transcript_83285.nnic	chr6	+	516	3	NNC	ENSG00000130338.13	novel	424	2	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAGAAGAAAAAAA	158228912	True	NA	NA	False	AAGAAA	-3	NA	158232211	158312358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_158232304_158282262_158282379_158312050
transcript_83288.known	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1444	junction_4	124.878691136639	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158631952	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
transcript_8329.known	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	46.7031851162209	688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-159920778	True	NA	-5	True	AATAAA	-19	NA	159925507	159918110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
transcript_83290.nnic	chr6	-	710	4	NIC	ENSG00000146425.11	novel	730	5	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_3	757.466977644717	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158631974	True	NA	-3	True	AATAAA	-16	NA	158644765	158636473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_158636898_158637127_158637206_158637770_158637895_158644681
transcript_83295.known	chr6	-	774	3	FSM	ENSG00000146425.11	ENST00000367085.3	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	1444	junction_2	94	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAACTTAAGTGACCT	-158631947	True	NA	NA	False	NA	NA	NA	158644738	158637219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158637895_158641318_158641361_158644681
transcript_83299.known	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	911.585886465103	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	-158799896	True	NA	-9	True	AATAAA	-16	NA	158819368	158765747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_83310.nic	chr6	-	1163	10	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-58	5126	-58	-5126	5prime_fragment	FALSE	canonical	0	0	junction_6	1078.14305379409	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGAGAGAAACCGTGG	NA	False	NA	-46	True	NA	NA	NA	158819426	158770873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_83316.known	chr6	-	3068	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	943.400155907697	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGGTGTGTGCTTGTGT	-158798755	False	NA	-2	True	AATAAA	-23	NA	158818227	158765740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
transcript_83317.known	chr6	+	980	4	FSM	ENSG00000203711.15	ENST00000650421.2	1135	4	106	49	19	0	multi-exon	FALSE	canonical	1	3	junction_2	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	158869813	True	NA	NA	False	AATAAA	-22	NA	158869957	158910353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158873527_158873622_158895220_158895367_158909966
transcript_83318.known	chr6	+	944	4	FSM	ENSG00000203711.15	ENST00000367073.7	1034	4	88	2	48	0	multi-exon	FALSE	canonical	2	3	junction_2	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869842	True	NA	NA	False	AATAAA	-20	NA	158869986	158910351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158873527_158873622_158895225_158895367_158909966
transcript_83319.known	chr6	+	975	3	FSM	ENSG00000203711.15	ENST00000655791.1	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869843	False	NA	NA	False	AATAAA	-20	NA	158869866	158910351	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158895220_158895367_158909966
transcript_8332.known	chr1	-	2366	7	FSM	ENSG00000162729.14	ENST00000368086.5	2366	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.452779528592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGGCTGTGTCTTCCCT	-160098672	False	NA	NA	False	AATAAA	-19	NA	160098689	160091339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160091632_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_83320.known	chr6	+	985	3	FSM	ENSG00000203711.15	ENST00000653976.1	985	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	158869830	False	NA	NA	False	AATAAA	-22	NA	158869853	158910353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158895225_158895367_158909966
transcript_83321.known	chr6	-	6576	8	FSM	ENSG00000130363.13	ENST00000367069.7	6576	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1.45686271816937	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTCTGTTTTTCATAA	-159000126	True	NA	-1	True	AATAAA	-17	NA	159000202	158972870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158977849_158978259_158978347_158980773_158980937_158982484_158982689_158983661_158983808_158986279_158986422_158993838_158993927_158999434
transcript_83324.known	chr6	+	1296	3	FSM	ENSG00000271913.8	ENST00000659171.1	1296	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGTCCTGCAGGAACA	NA	False	NA	NA	False	AATATA	-29	NA	158999860	159028296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158999911_159025948_159026042_159027143
transcript_83326.known	chr6	+	1774	3	FSM	ENSG00000271913.8	ENST00000667828.1	1774	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAGACATATTTAAAA	158999655	True	NA	NA	False	NA	NA	NA	158999922	159028354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159000393_159025948_159026042_159027143
transcript_83331.known	chr6	-	2352	12	FSM	ENSG00000120438.12	ENST00000321394.12	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	2281	junction_11	147.993131401929	2061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTATCTTACCTCG	-159758509	True	NA	-32	True	AATAAA	-23	NA	159789602	159778497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_8334.known	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_5	60.8677984560711	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160095800	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_83340.known	chr6	-	1878	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	757.19910855732	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTACACATTAAAGTAA	-159758610	True	NA	-62	True	NA	NA	NA	159789703	159778986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
transcript_83349.known	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1585	junction_5	71.5453309098504	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	159749925	True	NA	-26	True	NA	NA	NA	159762044	159779112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_8335.nnic	chr1	-	2034	7	NNC	ENSG00000162729.14	novel	2270	7	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	164.956559938266	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160098652	False	NA	NA	False	AATAAA	-16	NA	160098669	160091342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_160091609_160091807_160091939_160092281_160092696_160093209_160093332_160093709_160094172_160094868_160095247_160098408
transcript_83360.known	chr6	+	3656	8	FSM	ENSG00000146457.16	ENST00000358372.8	3656	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	183.214717348419	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	NA	False	NA	16	True	AATAAA	-23	NA	159725584	159756319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_83363.known	chr6	+	1623	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	181.217180936761	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTGGTTTTTTTTTT	159726976	False	NA	10	True	ATTAAA	-15	NA	159726997	159749416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_83370.known	chr6	+	3280	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	194.223624532472	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	159726974	False	NA	NA	False	NA	NA	NA	159726995	159755713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
transcript_83371.known	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	154.234107771271	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	-159693194	False	NA	55	True	TTTAAA	-16	NA	159693234	159679063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_83375.known	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	228.45937822729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	-159693188	False	NA	3	True	AATAAA	-21	NA	159693228	159679115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
transcript_83377.known	chr6	-	14167	5	FSM	ENSG00000112096.19	ENST00000538183.7	14167	5	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_2	25.0349755342401	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTTACTTCTTGA	-159684757	True	NA	NA	False	AATAAA	-14	NA	159693241	159669068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_83383.known	chr6	-	991	4	FSM	ENSG00000112096.19	ENST00000337404.8	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	238.295801240578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTTATAGAAAA	-159684794	True	NA	NA	False	NA	NA	NA	159693278	159682164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159682639_159684853_159685034_159692660_159692864_159693144
transcript_83387.known	chr6	-	1718	2	FSM	ENSG00000285427.1	ENST00000535372.1	1718	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACATATTGAAACCAAA	-159762273	True	NA	-12	True	AATAAA	-26	NA	159762332	159760257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159761637_159761993
transcript_83393.nic	chr6	+	1141	5	NIC	ENSG00000112110.10	novel	1075	4	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	519.52935431985	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159789586	False	NA	20	True	AATAAA	-20	NA	159789836	159798429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_159790061_159790667_159790788_159790939_159791127_159797286_159797519_159798051
transcript_83396.known	chr6	+	758	4	FSM	ENSG00000112110.10	ENST00000476826.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	473.261027341149	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGGGCTTCAGAAGC	159789730	False	NA	-96	True	TTTAAA	-21	NA	159789811	159798313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159789889_159790939_159791127_159797286_159797519_159798051
transcript_8340.nnic	chr1	-	1024	4	NIC	ENSG00000162729.14	novel	2270	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	237.689339731975	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160095802	True	NA	NA	False	AATAAA	-16	NA	160098621	160091342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160091609_160091807_160091939_160092281_160092696_160098408
transcript_83400.nnic	chr6	+	1036	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	210	junction_1	411.173929134618	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159789571	True	NA	20	True	AATAAA	-20	NA	159789821	159798429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
transcript_83404.known	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_1	133.386656004265	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159782322	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
transcript_83405.known	chr6	+	1075	4	FSM	ENSG00000112110.10	ENST00000480842.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	476.084026197057	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	159782372	False	NA	27	True	AATAAA	-27	NA	159790516	159798436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159790788_159790939_159791127_159797286_159797519_159798051
transcript_83406.nnic	chr6	-	986	3	NNC	ENSG00000112499.13	novel	2409	11	NA	NA	11118	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATCATTTTTTAGTC	-160234371	True	NA	NA	False	AATAAA	-23	NA	160234423	160216754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_160217499_160224704_160224805_160234281
transcript_83408.known	chr6	+	5445	27	FSM	ENSG00000085511.20	ENST00000366920.6	5445	27	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	25.899698428712	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATATTGTCTTTTAA	160988626	True	NA	27	True	AATAAA	-20	NA	160991813	161117382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093840_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_8341.nnic	chr1	+	1193	8	NNC	ENSG00000018625.15	novel	3114	20	NA	NA	-1	913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.6706504374286	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTAAGTTTGTTTTT	160113127	True	NA	NA	False	AATAAA	-16	NA	160115757	160126455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135_160125254_160126114
transcript_83412.nnic	chr6	-	1776	9	NNC	ENSG00000026652.15	novel	7923	9	NA	NA	183	-6095	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	28.1177768502419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTATGTTGACAT	-161270252	False	NA	0	True	ATTAAA	-17	NA	161273780	161136073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273696
transcript_83413.known	chr6	-	7923	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	11.5913491449443	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	-161270533	True	NA	4	True	AATAAA	-28	NA	161274061	161129966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_83417.known	chr6	-	7705	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	30.5934500126002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAAAAATGCACGTC	-161270497	True	NA	-8	True	AATAAA	-16	NA	161274025	161129978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
transcript_8342.nic	chr1	+	2064	7	ISM	ENSG00000018625.15	ENST00000472488.5	3114	20	-1	10737	-1	923	5prime_fragment	FALSE	canonical	3	25	junction_4	5.5075705472861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTGTTTTGCTT	160113127	True	NA	NA	False	AATAAA	-26	NA	160115757	160126465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135
transcript_83420.known	chr6	-	942	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGACATCACCTCTGC	-161270504	True	NA	NA	False	NA	NA	NA	161274032	161165837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_161166418_161232035_161232303_161273937
transcript_83422.known	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	50.9757845672325	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	163410232	True	NA	11	True	ATTAAA	-20	NA	163414717	163578592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
transcript_83423.known	chr6	+	1063	8	FSM	ENSG00000112531.17	ENST00000361195.6	1063	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	163.758906908408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGACCATGCCTGCC	163414741	False	NA	NA	False	NA	NA	NA	163415169	163570747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563443_163563720_163566720_163566796_163570693
transcript_83424.known	chr6	+	5685	7	FSM	ENSG00000112531.17	ENST00000453779.6	5685	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	163.473154438954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTGGCCCAGAGTTT	163413944	False	NA	NA	False	AATAAA	-21	NA	163414642	163570145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163565945
transcript_83427.known	chr6	+	568	2	FSM	ENSG00000288638.1	ENST00000675895.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCGCGCATCGAGTGTGC	NA	False	NA	NA	False	TATAAA	-23	NA	166168012	166168706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166168151_166168276
transcript_8343.nic	chr1	+	1465	3	ISM	ENSG00000018625.15	ENST00000472488.5	3114	20	-1	14767	-1	1160	5prime_fragment	FALSE	canonical	3	28	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGGTCCCTGCTTTAAA	160113127	True	NA	NA	False	ATTAAA	-30	NA	160115757	160122435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_160115874_160120905_160121011_160121191
transcript_83430.known	chr6	-	659	9	FSM	ENSG00000198818.10	ENST00000478705.5	659	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	550.561517339343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCCCATAAAACACTC	-166325791	True	NA	NA	False	NA	NA	NA	166342576	166320155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_8344.known	chr1	+	5435	23	FSM	ENSG00000018625.15	ENST00000361216.8	5435	23	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	7.79078179592623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTCTTCCATAATTCA	160113128	True	NA	NA	False	AATAAA	-26	NA	160115758	160143591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135_160125254_160127551_160127821_160128651_160128851_160128979_160129090_160129265_160129401_160130101_160130292_160130421_160130598_160134483_160134621_160135144_160135296_160135433_160135603_160135838_160135994_160136246_160136371_160136569_160136716_160136900_160137032_160139639_160139742_160139892_160139985_160141293
transcript_83443.known	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	59.9615523073081	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	-166325760	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
transcript_83448.known	chr6	-	2576	8	FSM	ENSG00000198818.10	ENST00000487841.5	2576	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	574.071601877007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTTTTAAGATTT	-166325762	True	NA	NA	False	ATTAAA	-20	NA	166342547	166319859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166320257_166322856_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_8346.nnic	chr1	+	1792	5	NNC	ENSG00000162734.13	novel	2694	6	NA	NA	3	604	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	230.13623682506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCCCTTTTTTGTGGT	160193439	True	NA	16	True	ATTAAA	-13	NA	160205386	160214639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_160205523_160207129_160207238_160211542_160211717_160213109_160213266_160213421
transcript_83467.known	chr6	+	3871	2	FSM	ENSG00000286760.2	ENST00000659081.2	3910	2	39	0	20	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAATTATGTGGTGCTGA	166342566	True	NA	NA	False	AATAAA	-15	NA	166342664	166351466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166343148_166348078
transcript_83473.known	chr6	-	1192	5	FSM	ENSG00000060762.19	ENST00000621685.4	1192	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	94.5155410501363	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166380024	True	NA	-35	True	AATAAA	-21	NA	166383013	166364918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166365454_166365973_166366107_166366794_166366892_166366968_166367188_166382805
transcript_83477.known	chr6	-	976	4	FSM	ENSG00000060762.19	ENST00000341756.10	976	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	93.5746879354787	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166380024	True	NA	-35	True	AATAAA	-21	NA	166383013	166364918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166365454_166365973_166366107_166366794_166366895_166382805
transcript_83482.known	chr6	-	8614	9	FSM	ENSG00000026297.17	ENST00000508775.6	8614	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.617100354279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTAATTGACTCAAGT	-166953261	True	NA	NA	False	AATAAA	-27	NA	166956550	166922112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096
transcript_83485.nnic	chr6	-	772	6	Fusion	ENSG00000227598.1_ENSG00000026297.17	novel	3954	6	NA	NA	-42	0	multi-exon	FALSE	canonical	1	6	junction_5	152.65385681338	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-166998210	True	NA	-21	True	AAAAAG	-39	NA	166999107	166929515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166998917
transcript_83486.nnic	chr6	-	619	2	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	110	349871	-9	-347814	internal_fragment	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	-166862536	False	NA	-1	True	ATTAAA	-17	NA	166862560	166858093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_166858260_166862107
transcript_83487.known	chr6	-	1220	9	FSM	ENSG00000026297.17	ENST00000028008.9	1220	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.617100354279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAACTGCAGCTTTCT	-166953295	True	NA	-50	True	AAAAAG	-10	NA	166956584	166929544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096
transcript_8349.known	chr1	+	1021	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	203.529413653708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCATGGGCCTAGCAT	160193432	True	NA	NA	False	NA	NA	NA	160205379	160214035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
transcript_83491.known	chr6	+	13956	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	77.717928362051	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGCGATCTTT	166993348	True	NA	NA	False	AATAAA	-19	NA	166999396	167052718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_83495.known	chr6	+	1484	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	56.5738017223725	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	166993359	True	NA	5	True	AATAAA	-18	NA	166999407	167040317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_8350.known	chr1	+	2420	4	FSM	ENSG00000162734.13	ENST00000360472.9	2420	4	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.4426012966897	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	160193436	True	NA	29	True	AATAAA	-21	NA	160205383	160215372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160205523_160211542_160211717_160213109_160213266_160213421
transcript_83501.nic	chr6	+	1373	7	ISM	ENSG00000213066.13	ENST00000366847.9	13956	13	-86	38459	-6	2568	5prime_fragment	FALSE	canonical	3	175	junction_6	75.2235557078588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTTGTGTTCTGTCA	166993262	True	NA	NA	False	ATTAAA	-22	NA	166999310	167014259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507
transcript_83508.nnic	chr6	+	862	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	308.109558436605	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227842	True	NA	27	True	AATAAA	-16	NA	167228089	167237511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
transcript_83515.nnic	chr6	+	780	4	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	38.19249489974	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227842	True	NA	27	True	AATAAA	-16	NA	167228089	167237511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167237240
transcript_83526.known	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	357.98448135204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167214669	True	NA	27	True	AATAAA	-16	NA	167228299	167237511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
transcript_83537.known	chr6	+	403	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	164	6	64	0	multi-exon	FALSE	canonical	3	226	junction_2	533.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167228296	False	NA	27	True	AATAAA	-16	NA	167228363	167237511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231859_167231958_167237240
transcript_83538.nic	chr6	+	2270	9	NIC	ENSG00000112494.10	novel	2111	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	1.6393596310755	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTCCTGCCCAAGTAC	167271006	True	NA	NA	False	AATAAA	-18	NA	167271175	167316014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_167271459_167291438_167291577_167294516_167294699_167296031_167296262_167297944_167298071_167303918_167304134_167305914_167306051_167307778_167307911_167315186
transcript_83547.known	chr6	-	1639	3	FSM	ENSG00000198221.11	ENST00000663809.2	1660	3	21	0	3	0	multi-exon	FALSE	canonical	1	1	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATATGAGGACAGA	-167826351	True	NA	NA	False	AAAAAG	-16	NA	167826812	167823341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_167824807_167825402_167825551_167826786
transcript_83548.nnic	chr6	-	614	3	FSM	ENSG00000198221.11	ENST00000692751.1	620	3	6	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGTATATCAATAT	-167826327	True	NA	-1	True	ATTAAA	-20	NA	167826788	167824377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_167824807_167825402_167825503_167826703
transcript_83550.nnic	chr6	-	692	3	NNC	ENSG00000198221.11	novel	645	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGTATATCAATAT	-167826327	True	NA	-1	True	ATTAAA	-20	NA	167826788	167824377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_167824807_167825402_167825532_167826654
transcript_8356.known	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_13	182.788881357508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250522	True	NA	-34	True	AGTAAA	-17	NA	160262549	160215719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
transcript_83562.known	chr6	-	2176	14	FSM	ENSG00000184465.16	ENST00000647873.1	2176	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	54.8286194864771	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTCCTATTGGTTTG	-169697052	True	NA	-7	True	AATAAA	-20	NA	169702054	169657761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169664165_169664287_169665485_169665557_169667135_169667188_169670568_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
transcript_83568.known	chr6	-	2078	1	FSM	ENSG00000184786.6	ENST00000628156.1	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGAGTTCCTGTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	169751587	169749509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_169749500_169751600
transcript_8357.known	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	180.162057226002	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250424	True	NA	-29	True	AGTAAA	-22	NA	160262451	160215714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
transcript_83570.known	chr6	+	2160	18	FSM	ENSG00000130023.16	ENST00000366773.8	2160	18	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	16.2062826896212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCAGGGTCCAGGT	169751331	True	NA	102	True	ATTAAA	-30	NA	169751621	169781600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_83572.nnic	chr6	+	2020	18	NNC	ENSG00000130023.16	novel	2160	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	21.4314712158897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAAGTCAGGATGCTTT	169751344	True	NA	18	True	AGTAAA	-16	NA	169751634	169781516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_169751664_169753906_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_83576.known	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_7	20.7451199080651	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	170304521	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_8358.known	chr1	-	3972	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	185.811509761272	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250449	True	NA	-29	True	AGTAAA	-22	NA	160262476	160215714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
transcript_83584.known	chr6	-	891	6	FSM	ENSG00000008018.9	ENST00000262193.7	891	6	0	0	0	0	multi-exon	TRUE	canonical	3	4256	junction_4	414.830085697747	5557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCTATAACTTGT	-170527144	True	NA	-15	True	ATTAAA	-17	NA	170553307	170535119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005_170549114_170553129
transcript_83591.known	chr6	+	1861	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	77.1730099800944	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTAAGAGTCATGTG	170550673	True	NA	24	True	AATAAA	-32	NA	170554378	170572870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_83595.nic	chr6	+	1527	4	ISM	ENSG00000112592.15	ENST00000421512.5	935	5	-31	1724	-31	-1724	5prime_fragment	FALSE	canonical	3	295	junction_1	39.3813266522205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTGTTTTGTATCTT	170550565	True	NA	NA	False	AATAAA	-20	NA	170554270	170565233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544
transcript_83596.nic	chr6	+	1021	3	ISM	ENSG00000112592.15	ENST00000421512.5	935	5	49	4461	-18	308	5prime_fragment	FALSE	canonical	3	295	junction_1	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCGTTATTATTATATTA	170550645	True	NA	NA	False	AATAAA	-18	NA	170554350	170562496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_170554464_170556881_170557084_170561790
transcript_83606.known	chr7	-	877	3	FSM	ENSG00000232325.4	ENST00000465755.2	877	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCGGGATATATTCCCA	NA	False	NA	NA	False	NA	NA	NA	95683	70971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_71572_71676_71834_95563
transcript_83607.known	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	-148701	False	NA	1	True	AATAAA	-17	NA	149466	144439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_145416_148531_148619_149328
transcript_83611.known	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	-148663	True	NA	-7	True	ATTAAA	-16	NA	149428	145935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_147840_148531_148619_149328
transcript_83612.nic	chr7	-	2303	3	NIC	ENSG00000242474.3	novel	2091	3	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	-7	True	ATTAAA	-16	NA	149544	145935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_147840_148531_148715_149328
transcript_83615.known	chr7	-	593	2	FSM	ENSG00000242474.3	ENST00000487884.2	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCGTGAGTCCTTAAAG	-148673	True	NA	NA	False	NA	NA	NA	149438	148231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148715_149328
transcript_83616.known	chr7	-	746	2	FSM	ENSG00000242474.3	ENST00000497320.2	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTTCATTCAGTTGT	-148701	False	NA	NA	False	TTTAAA	-9	NA	149466	148010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148619_149328
transcript_83621.known	chr7	-	2785	2	FSM	ENSG00000242474.3	ENST00000667371.1	2785	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAACTCCTTTAAATTT	-148665	True	NA	-29	True	GGGGCT	-28	NA	149430	145957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148619_149306
transcript_83622.known	chr7	+	3176	10	FSM	ENSG00000177706.9	ENST00000313766.6	3176	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_5	10.9284993830549	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTGGTGTGTGGCTGCC	NA	False	NA	49	True	AATAAA	-43	NA	192570	260772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_193805_195553_195733_208897_208977_246414_246508_248314_248431_255848_256030_256653_256764_257004_257087_258645_258706_259730
transcript_83624.known	chr7	-	2305	6	FSM	ENSG00000197461.13	ENST00000402802.7	2305	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.31058907144937	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGACGTGAGAAGCGT	-519316	False	NA	-14	True	ATTAAA	-23	NA	519409	497257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
transcript_83626.nnic	chr7	+	623	2	FSM	ENSG00000223855.3	ENST00000690212.1	609	2	-21	7	-21	0	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	522334	True	NA	11	True	AATAAA	-19	NA	522460	525233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_522704_524853
transcript_83627.known	chr7	+	743	3	FSM	ENSG00000223855.3	ENST00000663680.2	754	3	0	11	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	522415	True	NA	11	True	AATAAA	-19	NA	522541	525233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_522704_524079_524281_524853
transcript_83629.known	chr7	-	2472	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_10	119.527779197976	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	-723018	False	4263	-41	True	ATTAAA	-15	NA	727281	549197	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_83630.known	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_10	51.2375838618489	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-723387	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_83637.nnic	chr7	-	1393	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-43	819	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	155.06685137405	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGGCAGCTTCTCTAT	-723430	True	NA	-21	True	ATTAAA	-17	NA	727693	578436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_83639.nnic	chr7	-	1146	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-43	572	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	155.06685137405	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAATAAAAAACCTGCA	-723430	True	NA	NA	False	NA	NA	NA	727693	578683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_83641.nic	chr7	-	1836	9	ISM	ENSG00000188191.15	ENST00000403562.5	1917	11	-43	28695	-43	819	5prime_fragment	FALSE	canonical	3	372	junction_8	49.5454336947412	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGGCAGCTTCTCTAT	-723430	True	NA	-21	True	ATTAAA	-17	NA	727693	578436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_83643.nic	chr7	-	1588	9	ISM	ENSG00000188191.15	ENST00000403562.5	1917	11	-43	28943	-43	571	5prime_fragment	FALSE	canonical	3	372	junction_8	49.5454336947412	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAAAATAAAAAACCTGC	-723430	True	NA	NA	False	NA	NA	NA	727693	578684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_83647.nnic	chr7	-	1174	5	NNC	ENSG00000188191.15	novel	518	3	NA	NA	-43	-5568	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	206.555077400678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTCGGTGAATATTATT	-723430	True	NA	NA	False	AATAAA	-17	NA	727693	612963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_613572_677228_677321_680555_680727_711328_711528_727589
transcript_83648.nnic	chr7	-	433	3	NNC	ENSG00000188191.15	novel	2494	11	NA	NA	-43	-8877	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	179	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCTTACAGGTTTTTAA	-723430	True	NA	NA	False	AATAAA	-14	NA	727693	705589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_705720_711328_711528_727589
transcript_83656.nic	chr7	+	3892	19	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	129.630302908304	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806899	True	NA	9	True	AATAAA	-22	NA	816633	874902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_83657.known	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	119.132707835105	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806880	True	NA	9	True	AATAAA	-22	NA	816614	874902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_83658.known	chr7	+	3717	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	0	0	0	0	multi-exon	FALSE	canonical	2	61	junction_4	143.564445459173	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	806880	True	NA	27	True	AATAAA	-40	NA	816614	874920	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_8366.nic	chr1	-	2854	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	0	-106	intron_retention	FALSE	canonical	3	95	junction_12	170.206655438486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGTAATGGTGTGGAAG	-160250522	True	NA	-22	True	AATAAA	-17	NA	160262549	160216658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_83662.known	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	37.1397277184419	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	870792	True	NA	8	True	AATAAA	-16	NA	876553	896436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
transcript_83663.nic	chr7	+	1030	6	NIC	ENSG00000164828.18	novel	1309	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	223	junction_1	96.873938703864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTATTTTTATAAAAC	806885	True	NA	NA	False	AATAAA	-23	NA	816619	843818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340
transcript_83665.nic	chr7	+	534	3	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	5	3826	-3	0	5prime_fragment	FALSE	canonical	3	223	junction_1	90	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	806885	True	NA	13	True	AATAAA	-21	NA	816619	839180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_816674_832504_832602_838797
transcript_83666.nic	chr7	+	302	2	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	5	10254	-3	-6234	5prime_fragment	FALSE	canonical	3	223	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTTTTTTCTTACGG	806885	True	NA	NA	False	AATAAA	-19	NA	816619	832752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_816674_832504
transcript_83668.known	chr7	+	478	2	FSM	ENSG00000164828.18	ENST00000483996.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	NA	False	NA	13	True	AATAAA	-21	NA	832506	839180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_832602_838797
transcript_83669.known	chr7	+	4062	20	FSM	ENSG00000164828.18	ENST00000405266.5	4062	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	140.104867728494	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGGGATATAAACAGTC	NA	False	NA	7	True	AATAAA	-20	NA	832500	874900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_83670.known	chr7	-	2118	11	FSM	ENSG00000105963.15	ENST00000611167.4	2118	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	8.17557337438788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGTCCGAGGATGG	-945527	False	289	-2	True	AATAAA	-22	NA	945816	897900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_945761
transcript_83671.known	chr7	-	4839	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	10.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGTTTTCCAAG	-974228	True	NA	-4	True	ATTAAA	-17	NA	975549	964851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_969457_973180_973293_975427
transcript_83675.known	chr7	-	714	2	FSM	ENSG00000240230.6	ENST00000466146.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAACCAGAACTCACCAAC	-974228	True	NA	NA	False	AATAGA	-40	NA	975549	972700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_973293_975427
transcript_8368.nic	chr1	-	3009	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	0	-185	intron_retention	FALSE	canonical	3	99	junction_12	169.491641878491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGGTAAAATTA	-160250424	True	NA	-13	True	ATTAAA	-17	NA	160262451	160216737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_83682.known	chr7	-	1294	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_4	150.157209284137	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	-1124962	True	NA	-8	True	AATAAA	-37	NA	1138257	996985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_83683.known	chr7	-	621	5	FSM	ENSG00000146540.15	ENST00000491163.1	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	339.416687126605	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGGGTTCAGCGC	-1124965	True	NA	NA	False	NA	NA	NA	1138260	997632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
transcript_83684.known	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	384.299651603046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	-1027285	True	NA	-38	True	AATAAA	-7	NA	1028339	997015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
transcript_83689.nic	chr7	-	820	5	NIC	ENSG00000178381.12	novel	853	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	69.6648225433755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	-1157985	True	NA	-3	True	AATAAA	-20	NA	1160230	1152905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_1153132_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_83690.known	chr7	-	853	5	FSM	ENSG00000178381.12	ENST00000397083.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.9436396021518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	-1157908	True	NA	-3	True	AATAAA	-20	NA	1160153	1152905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1153242_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_83691.known	chr7	-	878	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	17.4122801493658	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	-1157951	True	NA	-4	True	AATAAA	-19	NA	1160196	1152906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_83693.known	chr7	+	588	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	6.59966329107444	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	1569663	True	NA	NA	False	AATAAA	-20	NA	1570141	1579485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
transcript_83695.nnic	chr7	-	785	3	NNC	ENSG00000157778.9	novel	774	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	236.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-1565579	True	NA	-2	True	ATTAAA	-21	NA	1570027	1567331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_1567851_1569123_1569361_1569998
transcript_83696.known	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	184.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-1565597	True	NA	-21	True	ATTAAA	-2	NA	1570045	1567350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1567851_1569123_1569361_1570008
transcript_83697.known	chr7	-	1007	3	FSM	ENSG00000157778.9	ENST00000252329.3	1007	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGAGGGAGGAACTTTG	NA	False	NA	NA	False	NA	NA	NA	1571005	1567612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1567851_1569123_1569361_1570473
transcript_83698.known	chr7	-	2695	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_18	22.9793922708109	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228532	False	4413	-7	True	AATAAA	-16	NA	2232945	1815794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_83700.nic	chr7	-	2549	18	NIC	ENSG00000002822.16	novel	2695	19	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_15	45.6123275997372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228527	False	4413	-7	True	AATAAA	-16	NA	2232940	1815794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2229983_2230144_2230548_2230728_2232871
transcript_83713.nnic	chr7	-	1677	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237796	True	NA	-1	True	AATAAA	-29	NA	2242209	2234194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_83714.known	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	-2237756	True	NA	-37	True	NA	NA	NA	2242169	2234230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2235565_2239417_2239708_2241974
transcript_83715.known	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	105.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237792	True	NA	-1	True	AATAAA	-29	NA	2242205	2234194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2235565_2239417_2239708_2242161
transcript_83720.nnic	chr7	-	1512	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	65	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGTGGTGTGTTTA	-2237808	True	NA	-17	True	CATAAA	-18	NA	2242221	2234290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_2235565_2239529_2239708_2242161
transcript_83722.nnic	chr7	-	1579	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGATGTGGTGTGTT	-2237796	True	NA	-19	True	CATAAA	-16	NA	2242209	2234292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_83729.nnic	chr7	+	722	5	NIC	ENSG00000106268.16	novel	698	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_1	441.356644336527	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234668	True	NA	15	True	AATAAA	-15	NA	2242212	2251145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_2242257_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_83733.known	chr7	+	712	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	473.921604804001	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234714	True	NA	15	True	AATAAA	-15	NA	2242258	2251145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_83735.known	chr7	+	783	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	514.536927732111	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234716	True	NA	15	True	AATAAA	-15	NA	2242260	2251145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_83737.known	chr7	+	658	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	362.409528940212	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234681	True	NA	15	True	AATAAA	-15	NA	2242225	2251145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
transcript_83746.known	chr7	+	698	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	391.033957036413	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
transcript_83747.known	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	16.5819178625393	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-2311631	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_83749.known	chr7	-	583	4	FSM	ENSG00000106266.11	ENST00000447136.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.291478179656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTAAAGCCAGGCGTGC	-2354057	False	NA	NA	False	NA	NA	NA	2354318	2275115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2275230_2278099_2278306_2337115_2337282_2354221
transcript_83750.nic	chr7	+	2792	20	NIC	ENSG00000106263.19	novel	3096	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	783.04557060938	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2353812	True	NA	30	True	AATAAA	-20	NA	2354092	2380745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_2354196_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
transcript_83752.nnic	chr7	+	1577	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	-6	686	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGGAATGCTGGAG	2401693	True	NA	28	True	AATATA	-22	NA	2403581	2434061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_2403660_2432562
transcript_83754.known	chr7	+	15979	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGGACTGAACAAAACC	2401699	True	NA	NA	False	AGTAAA	-17	NA	2403587	2448483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2403646_2432562
transcript_83757.known	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	452	junction_13	75.0334836498949	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-2550497	True	NA	0	True	NA	NA	NA	2555524	2537809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_83761.nic	chr7	-	1203	4	ISM	ENSG00000106009.16	ENST00000340611.9	2779	14	-15	6395	-15	-2024	5prime_fragment	FALSE	canonical	3	452	junction_3	85.0581500438899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAAGAAGGAACGA	-2550512	True	NA	NA	False	NA	NA	NA	2555539	2544204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_2545057_2547323_2547479_2554304_2554448_2555486
transcript_83762.nnic	chr7	-	1056	3	FSM	ENSG00000289352.1	ENST00000690042.1	905	3	-153	2	-153	-2	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGGGTCCACTCCTTCCT	-2622350	False	NA	NA	False	TATAAA	-35	NA	2622389	2614584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2614977_2617649_2617802_2621877
transcript_83765.known	chr7	+	5529	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_7	11.5101857065818	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	4772305	True	NA	17	True	AATAAA	-17	NA	4775622	4794397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_8377.known	chr1	-	3653	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_7	38.1928511314751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGTGACTCTGGA	-160276322	True	NA	-7	True	AATACA	-20	NA	160285133	160276806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_83770.nic	chr7	+	2360	7	NIC	ENSG00000196204.12	novel	807	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	86.9418707464297	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	4970001	True	NA	15	True	ATTAAA	-18	NA	4973987	4998167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
transcript_83774.nic	chr7	+	2247	7	NIC	ENSG00000196204.12	novel	576	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	86.9418707464297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	4970062	True	NA	15	True	ATTAAA	-18	NA	4974048	4998167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4995474_4995583_4996609
transcript_83775.nic	chr7	+	2279	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	96.8846737105514	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970001	True	NA	13	True	ATTAAA	-16	NA	4973987	4998165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989033_4989178_4996609
transcript_83776.known	chr7	+	2201	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.2910819216967	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970050	True	NA	13	True	ATTAAA	-16	NA	4974036	4998165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
transcript_83777.nic	chr7	+	2198	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	81.2910819216967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970001	True	NA	13	True	ATTAAA	-16	NA	4973987	4998165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4996609
transcript_83778.nic	chr7	+	576	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	12	9045	-1	-248	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAGAAAAGAAATG	4970062	True	NA	NA	False	ATTAAA	-38	NA	4974048	4989120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_83779.nic	chr7	+	832	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	4	8797	4	0	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTGGTGTTAG	4970054	True	NA	NA	False	GATAAA	-11	NA	4974040	4989368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_83780.nic	chr7	+	1237	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-49	8445	0	352	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTAGAGATCATCCCT	4970001	True	NA	3	True	AGTAAA	-15	NA	4973987	4989720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_83781.known	chr7	+	1360	5	FSM	ENSG00000196204.12	ENST00000403969.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.025482284724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTTCACAGTGAACAA	4970063	True	NA	NA	False	NA	NA	NA	4974049	4997452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4996609
transcript_83783.nnic	chr7	+	2147	5	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	26	junction_2	74.5297759288192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970001	True	NA	13	True	ATTAAA	-16	NA	4973987	4998165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4984909_4985076_4989062_4989178_4996609
transcript_83787.known	chr7	+	514	3	FSM	ENSG00000273313.1	ENST00000498308.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTGTTTCCTTTTGGGA	5072104	True	NA	5	True	AATAAA	-18	NA	5072124	5073223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_5072201_5072361_5072498_5072921
transcript_83790.nnic	chr7	-	1030	3	Antisense	novelGene_ENSG00000164638.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTGAACACCCTTTGC	-5296374	True	NA	NA	False	AATAAA	-27	NA	5296438	5289867	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_5290593_5290712_5290845_5296265
transcript_83795.known	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	13718.430522476	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-4934653	True	NA	-13	True	AATAAA	-13	NA	5530601	5527155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
transcript_8380.known	chr1	-	3504	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	233.760383013604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTGGCTTCATGA	-160276343	True	NA	-5	True	ATTAAA	-21	NA	160285154	160276866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
transcript_83810.known	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_5	1574.97801889423	11147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-4934653	True	NA	-5	True	AATAAA	-21	NA	5530601	5527147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_83822.known	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	247	junction_4	13034.1741395456	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
transcript_83824.known	chr7	-	2271	5	FSM	ENSG00000075624.17	ENST00000477812.2	2271	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	12742.1444697311	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCCAAGTGTGACTTT	-5530525	False	NA	-9	True	AATAAA	-17	NA	5530590	5527151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5529060_5529160_5529664_5530523
transcript_83825.known	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1755.59681803653	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-4934653	True	NA	-13	True	AATAAA	-13	NA	5530601	5527155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
transcript_83828.known	chr7	-	1300	5	FSM	ENSG00000075624.17	ENST00000432588.6	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1595.48848319253	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTATGACGAGTCCGGC	-5530562	False	NA	NA	False	NA	NA	NA	5530627	5527797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_83834.known	chr7	-	425	2	FSM	ENSG00000075624.17	ENST00000646584.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCGAGTAGCTGGGATT	-5562653	True	NA	NA	False	NA	NA	NA	5562716	5561851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5561950_5562389
transcript_83835.known	chr7	+	515	1	FSM	ENSG00000272719.1	ENST00000609813.1	515	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCATTCGGGGTGTAT	5556711	False	NA	NA	False	AATAAA	-18	NA	5556730	5557245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_5556700_5557200
transcript_83836.known	chr7	-	811	3	FSM	ENSG00000075624.17	ENST00000676319.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13237.5	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527784_5529570_5529664_5530523
transcript_83837.known	chr7	+	2784	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	0	0	0	0	multi-exon	FALSE	canonical	1	391	junction_4	374.07778268697	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	5546045	True	NA	32	True	AATAAA	-22	NA	5592815	5606655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_83838.nnic	chr7	+	1872	5	NNC	ENSG00000075618.18	novel	2215	4	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	540.239472363877	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCGGCCTGTGTGTGTCT	5594386	True	NA	31	True	AATAAA	-21	NA	5594397	5606654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_5594440_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_83841.known	chr7	-	5639	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_14	31.5693061968425	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	-5777659	True	NA	-6	True	AATAAA	-19	NA	5781696	5620046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_83842.known	chr7	-	5777	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_14	40.2103842309421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	-5777626	True	NA	-6	True	AATAAA	-19	NA	5781663	5620046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_83844.nic	chr7	-	1650	8	ISM	ENSG00000011275.19	ENST00000389902.8	5777	17	-11	105334	-11	4149	5prime_fragment	FALSE	canonical	3	74	junction_5	59.2173443979973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAGAAAACAAATG	-5777637	True	NA	10	True	ATTAAA	-38	NA	5781674	5725380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_83855.known	chr7	+	2379	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_8	254.686081284392	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	5898709	False	NA	NA	False	NA	NA	NA	5898732	5926550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_83869.known	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	30.9271692192863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	-6006483	True	NA	-34	True	AATACA	-12	NA	6009075	5973273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
transcript_83871.known	chr7	-	2730	14	FSM	ENSG00000122512.16	ENST00000441476.6	2730	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	33.7889376526151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	-6006514	True	NA	-2	True	AATACA	-44	NA	6009106	5973241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003971_6004059_6005891_6006032_6008996
transcript_83874.known	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_8	40.0731474039305	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	-6049749	True	NA	-24	True	AATAAA	-25	NA	6059175	6022246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_83878.known	chr7	+	1107	5	FSM	ENSG00000106305.10	ENST00000400479.6	1107	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	350.080347920302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACTGATTTTAAAGGG	5997426	True	NA	NA	False	NA	NA	NA	6009254	6023695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6009379_6014901_6015053_6015145_6015353_6017813_6018046_6023302
transcript_83879.known	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	9.7410927974683	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	5997443	True	NA	16	True	AATAAA	-17	NA	6009271	6023834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
transcript_83880.nnic	chr7	+	1107	4	NIC	ENSG00000106305.10	novel	1198	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	284.966664717121	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	5997414	True	NA	16	True	AATAAA	-17	NA	6009242	6023834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_6009379_6015145_6015353_6017813_6018046_6023302
transcript_83881.known	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	287.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	5997487	True	NA	-71	True	TTTAAA	-36	NA	6009315	6023747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6009499_6017813_6018046_6023302
transcript_83885.known	chr7	-	207	2	FSM	ENSG00000286075.2	ENST00000578372.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTCCCAGACTGACGA	-6346490	False	NA	NA	False	NA	NA	NA	6348758	6331214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6331236_6348572
transcript_83886.known	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	3568	junction_1	63.1803767003648	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	6335317	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
transcript_83890.known	chr7	-	2839	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	13.0188246749992	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTGTACAGCTGC	-6445328	True	NA	-14	True	AATAAA	-16	NA	6447954	6409128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
transcript_8390.known	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	120.781713111804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	-160250398	True	NA	40	True	AATAAA	-17	NA	160262425	160239221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
transcript_83902.known	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_2	49.7543967906355	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	-6473930	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
transcript_83904.nic	chr7	-	1096	5	ISM	ENSG00000215045.9	ENST00000435185.5	3215	21	27486	3660	27486	-3660	internal_fragment	FALSE	canonical	2	5	junction_4	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTTTGTTTGTTTA	-6503361	True	NA	-3	True	TATAAA	-17	NA	6503700	6501386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_6501900_6501988_6502119_6502785_6502873_6503007_6503164_6503490
transcript_83905.known	chr7	+	1461	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.821294387833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574095	True	NA	12	True	NA	NA	NA	6577433	6588978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_83906.known	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	54.3454558489353	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574115	True	NA	NA	False	NA	NA	NA	6577453	6589374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_83910.nic	chr7	+	1386	8	NIC	ENSG00000136247.15	novel	1706	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	113.548874669789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGCTTGTTTGTTTTGA	6574063	True	NA	10	True	NA	NA	NA	6577401	6588976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_83911.known	chr7	+	1348	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	97.3109889551461	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	6574095	True	NA	25	True	AAGAAA	-31	NA	6577433	6588931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_83912.known	chr7	+	1552	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	87.6665761361111	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574095	True	NA	12	True	NA	NA	NA	6577433	6588978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_83914.known	chr7	+	1485	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	128.286191535861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	6574129	True	NA	13	True	AAGAAA	-19	NA	6577467	6588919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_83915.known	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	109.404883672661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574166	False	NA	NA	False	NA	NA	NA	6577504	6589374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_8392.known	chr1	-	728	3	FSM	ENSG00000132716.19	ENST00000447377.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	140.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGAAGGTGGTGGT	-160250487	True	NA	NA	False	NA	NA	NA	160262514	160239783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160240371_160243959_160244035_160262448
transcript_83920.known	chr7	+	807	7	FSM	ENSG00000136247.15	ENST00000483589.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	129.127413390375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGCTCTCGTGAC	6574142	True	NA	NA	False	NA	NA	NA	6577480	6583431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_83924.known	chr7	+	1604	6	FSM	ENSG00000136247.15	ENST00000474097.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	125.295490740888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGTACAGTTGAAAAA	6574129	True	NA	NA	False	ACTAAA	-36	NA	6577467	6584320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_83925.known	chr7	+	2178	6	FSM	ENSG00000146576.13	ENST00000344417.10	2178	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	11.2356575241505	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	6588591	True	NA	12	True	AATAAA	-17	NA	6590020	6608726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
transcript_83926.known	chr7	-	1814	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_3	351.54122033104	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTGGTGTTGAGTC	-6826263	False	NA	-2	True	AATAAA	-20	NA	6826275	6798936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
transcript_83927.known	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_1	214.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	-6826204	False	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6824549_6824639_6824738_6826077
transcript_8393.known	chr1	-	5318	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	0	0	0	0	multi-exon	TRUE	canonical	3	721	junction_17	64.4837370485768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAAAAAGCTATTC	-160328982	True	NA	NA	False	AATAAA	-28	NA	160343250	160288593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_83936.nnic	chr7	+	2032	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	233.158208090558	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7176070	True	NA	28	True	AATAAA	-18	NA	7182613	7244350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_7182821_7234302_7234540_7237538_7237632_7238254_7238923_7243523
transcript_83937.nnic	chr7	+	1752	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-11	10715	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	219.44632031547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGCCGGGCGCGGTGG	7176070	True	NA	NA	False	AATACA	-15	NA	7182613	7259331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523_7243751_7258918
transcript_8394.known	chr1	-	4664	33	FSM	ENSG00000122218.16	ENST00000368069.7	4664	33	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_17	157.881652546892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCATTTATTTCTTGG	-160328980	True	NA	-13	True	AATAAA	-21	NA	160343248	160289272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305599_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_83940.nnic	chr7	+	2130	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	232.367166355318	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7176077	True	NA	28	True	AATAAA	-18	NA	7182620	7244350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
transcript_83943.known	chr7	+	6275	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	66.5482281256734	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	7176000	True	NA	15	True	AATAAA	-15	NA	7182543	7248616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
transcript_83948.nnic	chr7	+	1879	4	NNC	ENSG00000106392.11	novel	1777	3	NA	NA	619	0	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_1	235.777201800532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7182936	True	NA	28	True	AATAAA	-18	NA	7183248	7244350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_7183396_7234302_7234540_7238254_7238923_7243523
transcript_83951.known	chr7	+	1777	3	FSM	ENSG00000106392.11	ENST00000223122.4	1777	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_1	53.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	7234257	7244350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7234540_7238254_7238923_7243523
transcript_83952.known	chr7	+	4877	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	83.9740369929235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	7566592	True	NA	NA	False	NA	NA	NA	7566883	7608932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_83953.known	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	74.2348295435193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566733	True	NA	16	True	AATAAA	-14	NA	7566874	7607223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_83954.nic	chr7	+	2869	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	63.3909299505852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566881	False	NA	16	True	AATAAA	-14	NA	7567002	7607223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_83955.nic	chr7	+	3127	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	15	258	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	63.3909299505852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTCTGTGATTCAG	7566881	False	NA	6	True	AATAAA	-24	NA	7567002	7607481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_83958.nic	chr7	+	2417	5	NIC	ENSG00000219545.12	novel	2232	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	61.0348261241072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGATTGCATTATTT	7637972	True	NA	34	True	AATAAA	-30	NA	7640768	7879223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7640822_7641503_7641706_7673308_7673454_7801669_7801744_7877280
transcript_83961.known	chr7	+	2157	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	60.4777277644883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	7637979	True	NA	-4	True	AATAAA	-8	NA	7640775	7879185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
transcript_83962.nic	chr7	+	615	4	NIC	ENSG00000219545.12	novel	569	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	60.7307353999787	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	7637938	True	NA	NA	False	AATAAA	-18	NA	7640734	7968020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7640822_7673321_7673454_7801669_7801744_7967698
transcript_83963.known	chr7	+	2232	4	FSM	ENSG00000219545.12	ENST00000682710.1	2232	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	29.4089933334837	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGATTGCATTATTT	7637955	True	NA	34	True	AATAAA	-30	NA	7640751	7879223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7877280
transcript_83964.known	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	44.5446093508768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	7637997	True	NA	NA	False	AATAAA	-18	NA	7640793	7968020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
transcript_83966.nnic	chr7	+	2239	4	NIC	ENSG00000219545.12	novel	2232	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	63.2156801926723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGATTGCATTATTT	7637938	True	NA	34	True	AATAAA	-30	NA	7640734	7879223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7640822_7673318_7673454_7801669_7801744_7877280
transcript_83967.nnic	chr7	+	618	4	NIC	ENSG00000219545.12	novel	569	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	62.7286927082726	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	7637938	True	NA	NA	False	AATAAA	-18	NA	7640734	7968020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7640822_7673318_7673454_7801669_7801744_7967698
transcript_83970.nic	chr7	+	960	3	ISM	ENSG00000219545.12	ENST00000636849.1	2157	4	-61	76795	4	63568	5prime_fragment	FALSE	canonical	2	7	junction_1	71.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCATTCAAAATCCCGT	7637918	True	NA	NA	False	NA	NA	NA	7640714	7802390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_7640822_7673321_7673454_7801669
transcript_83973.nnic	chr7	+	537	3	NNC	ENSG00000219545.12	novel	570	4	NA	NA	-17	-17595	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCACGTTTGTACCATT	7637938	True	NA	NA	False	AATAAA	-16	NA	7640734	7721227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_7640822_7673318_7673454_7720912
transcript_83978.known	chr7	-	434	4	FSM	ENSG00000106399.11	ENST00000406109.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_3	1059.41902317575	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATTTCTGTGCTTTCT	-7640756	False	NA	-23	True	ATTAAA	-32	NA	7640816	7636926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640722
transcript_8398.nic	chr1	-	1688	12	ISM	ENSG00000122218.16	ENST00000649231.1	3969	31	-22	20116	7	-813	5prime_fragment	FALSE	canonical	3	785	junction_4	61.5708957756144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACATTCTAATTTTA	-160328998	True	NA	NA	False	NA	NA	NA	160343266	160309742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_83986.known	chr7	+	4741	8	FSM	ENSG00000106415.13	ENST00000223145.10	4741	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	24.2411355563477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	7967548	True	NA	14	True	AATAAA	-20	NA	7968795	8089080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
transcript_83987.known	chr7	+	1475	6	FSM	ENSG00000106415.13	ENST00000489405.5	1475	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	34.1853769907544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGGTGTTTGTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	8003896	8086939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_8004060_8022482_8022570_8055435_8055550_8060095_8060249_8070920_8071132_8086192
transcript_83993.nic	chr7	-	1763	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	94.6902143116728	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-8262557	False	NA	-6	True	AATAAA	-37	NA	8262585	8113771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262439
transcript_83995.known	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	107.815972952381	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	-8262178	False	NA	-24	True	NA	NA	NA	8262206	8113254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
transcript_83996.known	chr7	-	2440	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	38.7389992019876	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGTTTATGGAGTC	NA	False	NA	44	True	ATTAAA	-22	NA	8262612	8113186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_84004.known	chr7	-	1615	8	FSM	ENSG00000003147.19	ENST00000407906.5	1615	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_7	39.6911546204194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGATACGTGCACAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	8262612	8156556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_84006.nic	chr7	-	1781	7	ISM	ENSG00000003147.19	ENST00000407906.5	1615	8	7	1139	7	-580	5prime_fragment	FALSE	canonical	3	285	junction_6	42.165349123026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACTAGGTTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	8262605	8157695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_84009.known	chr7	-	539	4	FSM	ENSG00000003147.19	ENST00000446305.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	131.699995781659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCGAAAGCAATTGTAC	NA	False	NA	NA	False	NA	NA	NA	8262687	8228641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8228674_8232589_8232753_8235909_8236006_8262439
transcript_84011.known	chr7	+	1953	1	FSM	ENSG00000122584.13	ENST00000602349.2	1953	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTACTTGTGTAAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	8751006	8752959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_8751000_8753000
transcript_84017.known	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11961	junction_2	636.085424032548	5828	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	-10862285	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
transcript_8402.known	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_1	62.7435255624036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-160328991	True	NA	NA	False	NA	NA	NA	160343259	160333461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_84021.known	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	20.6555203040529	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	10968771	True	NA	NA	False	AATAAA	-17	NA	10973871	11169618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_84023.known	chr7	+	2627	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	41.0144315302553	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	10968788	True	NA	NA	False	AATAAA	-22	NA	10973888	11169623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_84026.nic	chr7	+	780	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-61	80511	-26	-32658	5prime_fragment	FALSE	canonical	3	125	junction_2	8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAGAAGAAAATG	10968745	True	NA	7	True	ATTAAA	-9	NA	10973845	10982561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_84027.nic	chr7	+	841	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-61	80450	-26	-32597	5prime_fragment	FALSE	canonical	3	125	junction_2	8	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAAGGAGAAAGA	10968745	True	NA	-10	True	AAAAAG	-19	NA	10973845	10982622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_84028.known	chr7	+	12351	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	16.7502665223998	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTATTTATATCAG	12208700	True	NA	NA	False	AATAAA	-18	NA	12211293	12243367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
transcript_84036.known	chr7	-	1394	8	FSM	ENSG00000146530.15	ENST00000326715.4	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	11.581124685435	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATAGT	-12403703	False	1249	NA	False	NA	NA	NA	12403724	12377563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12388807_12388958_12389126_12389359_12393593_12393779_12403658
transcript_84038.known	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12687044_12688168
transcript_8404.known	chr1	+	2822	17	FSM	ENSG00000162736.17	ENST00000294785.10	2822	17	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	28.2486172227952	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	160338889	True	NA	13	True	ATTAAA	-16	NA	160343382	160358949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_84042.known	chr7	+	2889	2	FSM	ENSG00000122644.13	ENST00000651779.1	2889	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAGATTTTCTAGCTTG	12686566	True	NA	NA	False	TATAAA	-25	NA	12687632	12690958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12687729_12688165
transcript_84044.known	chr7	+	840	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	12686568	True	NA	NA	False	NA	NA	NA	12687634	12688914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12687729_12688168
transcript_84047.known	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	49	junction_13	47.6307294772245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	-13983925	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_84050.known	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	3	75	junction_12	33.4168744798193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	-13989937	False	NA	-10	True	TTTAAA	-6	NA	13989947	13894380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_84053.nic	chr7	-	2026	13	ISM	ENSG00000006468.14	ENST00000430479.6	6459	14	-61	9144	-51	0	5prime_fragment	FALSE	non_canonical	3	49	junction_12	49.5535624910617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTTGTACTTTTTTC	-13983986	True	NA	NA	False	AATAAA	-11	NA	13989727	13900372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_84068.known	chr7	-	622	6	FSM	ENSG00000006468.14	ENST00000483075.1	622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.0386915776741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAACTCCAATCTTTAAC	-13989629	False	NA	NA	False	AAAACA	-10	NA	13989639	13974863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13975087_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_84072.nnic	chr7	-	1454	12	NNC	ENSG00000187546.14	novel	2476	13	NA	NA	14216	-831	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	3.42330370613868	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGCCTTTCACATTTG	-15547673	True	NA	NA	False	AGTAAA	-16	NA	15547799	15201147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_15201360_15365513_15365620_15366139_15366223_15385445_15385563_15387405_15387541_15390670_15390751_15390839_15390906_15394112_15394180_15418557_15418654_15431004_15431109_15544771_15544924_15547563
transcript_84076.nnic	chr7	-	981	3	NNC	ENSG00000214960.11	novel	1709	9	NA	NA	84538	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	1	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGATACCAGGGAACGGA	NA	False	NA	NA	False	AATAAA	-10	NA	16216928	16091191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_16091800_16216065_16216198_16216687
transcript_84077.known	chr7	-	1758	2	FSM	ENSG00000171243.8	ENST00000307068.5	1758	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATTTTTTTTTCTAAG	-16465708	True	NA	NA	False	AATAAA	-14	NA	16465738	16461480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_16462964_16465463
transcript_84080.known	chr7	-	2489	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	10.2306728354819	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCATCTTGTTTTATAA	-16644654	True	NA	NA	False	AATAAA	-20	NA	16645754	16599778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_84083.nic	chr7	-	691	3	ISM	ENSG00000106524.9	ENST00000628652.1	1270	9	1	23217	0	228	5prime_fragment	FALSE	canonical	3	75	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGATTTGTTTCTTTT	-16644716	True	NA	NA	False	AATAAA	-13	NA	16645816	16626862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_16627179_16636390_16636456_16645506
transcript_84086.known	chr7	+	1862	12	FSM	ENSG00000136261.16	ENST00000433922.6	1862	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	186.639883950328	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGGGCTTATATTG	16638261	True	NA	12	True	AATAAA	-10	NA	16646133	16706512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_8409.nic	chr1	+	2466	14	NIC	ENSG00000162736.17	novel	2822	17	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	96.2226215575541	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	160338831	True	NA	13	True	ATTAAA	-16	NA	160343324	160358949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_84090.known	chr7	+	1804	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	89.5677406508016	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	16638308	True	NA	17	True	AATAAA	-15	NA	16646180	16706517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84094.known	chr7	+	1784	12	FSM	ENSG00000136261.16	ENST00000436868.5	1784	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	210.051233419747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTGGGCTTATA	16638301	True	NA	9	True	AATAAA	-7	NA	16646173	16706509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685923_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84101.known	chr7	+	1721	11	FSM	ENSG00000136261.16	ENST00000630952.2	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	218.661930843025	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	16638261	True	NA	23	True	AATAAA	-21	NA	16646133	16706523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84104.known	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	218.861051811418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	16638322	True	NA	-19	True	NA	NA	NA	16646194	16706481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84117.known	chr7	+	1873	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	21.301643129111	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	16751518	True	NA	28	True	ATTAAA	-30	NA	16753754	16784536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
transcript_84118.known	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_13	16.5987951369971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-17937124	True	NA	-14	True	AATAAA	-14	NA	17940494	17790760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_8412.known	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	4.89064079103534	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	-160954420	True	NA	-4	True	ACTAAA	-17	NA	160954809	160945024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
transcript_84125.known	chr7	-	4146	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	53.8568472898294	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATCATTACTTTTC	-17937114	True	NA	NA	False	AATAAA	-28	NA	17940484	17879426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_84127.known	chr7	+	4279	11	FSM	ENSG00000048052.24	ENST00000622668.4	4279	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	16.1418710191849	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCCTTTCATACA	18494590	True	NA	1	True	AATAAA	-10	NA	18495745	18668837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_84130.known	chr7	-	3893	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	34.5350063944784	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGCCTCTGATGTGA	-19708341	True	NA	-2	True	AATAAA	-21	NA	19709037	19695460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
transcript_84137.known	chr7	-	3975	4	FSM	ENSG00000173452.14	ENST00000405764.7	3975	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGTGTTGGCTTTCT	-19773354	False	NA	NA	False	AATAAA	-19	NA	19773393	19719315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19722135_19725513_19725769_19729381_19729439_19772549
transcript_84165.nnic	chr7	-	2094	7	FSM	ENSG00000243004.7	ENST00000457921.6	955	7	-1139	0	907	0	multi-exon	FALSE	canonical	3	319	junction_6	201.113290350378	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20124236	False	NA	-2	True	AATAAA	-14	NA	20124255	19918980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
transcript_84170.nic	chr7	-	1013	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_2	184.517087435163	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20125249	False	NA	-2	True	AATAAA	-14	NA	20125268	19918980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_84177.nic	chr7	-	929	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_3	206.772553519293	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20121354	True	NA	-2	True	AATAAA	-14	NA	20125201	19918980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
transcript_84208.nic	chr7	-	837	6	NIC	ENSG00000243004.7	novel	799	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_1	231.043718806636	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACCGTCCATTGGTCT	-20125196	False	NA	-13	True	AATAAA	-3	NA	20125215	19918991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_19919261_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_84211.nic	chr7	-	795	6	NIC	ENSG00000243004.7	novel	799	6	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_1	252.272075347233	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACCGTCCATTGGTCT	-20121343	True	NA	-13	True	AATAAA	-3	NA	20125190	19918991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_19919261_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
transcript_84212.known	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	246.862714884204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	-20121315	True	NA	NA	False	TATAAA	-12	NA	20125162	19931070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_84243.nic	chr7	-	1512	5	ISM	ENSG00000243004.7	ENST00000415499.5	743	6	-43	28897	-43	-16749	5prime_fragment	FALSE	canonical	3	474	junction_1	163.325595054786	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTAGTCTGTTCT	-20121358	True	NA	-4	True	AATATA	-17	NA	20125205	19959967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_8426.known	chr1	-	4639	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_3	143.451458645963	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCAGCTTATTACCC	-160994055	True	NA	-13	True	ATTAAA	-18	NA	161021152	160995210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_84270.nic	chr7	-	476	4	NIC	ENSG00000243004.7	novel	587	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	308.716698608935	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCCACCAGGGATT	-20121360	True	NA	-10	True	ATTAAA	-16	NA	20125207	20007104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_20007353_20028918_20028960_20045502_20045562_20125079
transcript_84282.known	chr7	-	566	4	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	154879	0	121	0	3prime_fragment	FALSE	canonical	3	349	junction_2	57.5634915163731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-19968172	True	NA	-2	True	AATAAA	-14	NA	19968237	19918980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136
transcript_84283.known	chr7	+	483	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	20002695	False	NA	NA	False	NA	NA	NA	20002764	20003247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20002800_20003200
transcript_84284.nnic	chr7	+	1075	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24877	5439	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	20.0720922897661	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120980	True	NA	8	True	AATAAA	-20	NA	20121013	20135914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_20121314_20128961_20129003_20130211_20130514_20135482
transcript_84285.nnic	chr7	+	1058	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24877	5439	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	24.7116706571342	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120980	True	NA	8	True	AATAAA	-20	NA	20121013	20135914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_20121314_20128961_20129003_20130228_20130514_20135482
transcript_84292.nnic	chr7	+	782	5	Fusion	ENSG00000228598.1_ENSG00000267055.1	novel	639	4	NA	NA	-20899	0	multi-exon	FALSE	canonical	1	1	junction_2	23.3291662945764	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	20120983	True	NA	5	True	AATAAA	-16	NA	20121016	20153531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_20121314_20128961_20129003_20147516_20147538_20150434_20150590_20153263
transcript_84293.known	chr7	-	2994	5	FSM	ENSG00000183742.13	ENST00000332878.8	2994	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.1720402163943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAAAGTGCCCTC	-20215802	True	NA	NA	False	AATACA	-33	NA	20217404	20140624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20217298
transcript_84295.known	chr7	-	9153	7	FSM	ENSG00000183742.13	ENST00000400331.10	9153	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.77551626063147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTATGATTAAGTT	-20215782	True	NA	NA	False	AATAGA	-22	NA	20217384	20134654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20164255_20164400_20170713_20170779_20217298
transcript_84300.nnic	chr7	+	770	3	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24880	5439	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_2	18	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120983	True	NA	8	True	AATAAA	-20	NA	20121016	20135914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_20121314_20128961_20129003_20135482
transcript_84302.nnic	chr7	+	886	5	FSM	ENSG00000233834.7	ENST00000688687.1	888	5	0	2	0	0	multi-exon	FALSE	canonical	3	13	junction_3	25.2425731651906	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	20216884	True	NA	NA	False	ATTAAA	-31	NA	20217538	20221700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219491_20219757_20221342
transcript_84303.known	chr7	+	740	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	50	8	9	-5	multi-exon	FALSE	canonical	3	42	junction_1	16.4544826719043	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAATATATGTGTATG	20216931	False	NA	NA	False	ATTAAA	-23	NA	20217585	20221692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
transcript_84306.nnic	chr7	+	815	4	FSM	ENSG00000233834.7	ENST00000685385.1	817	4	0	2	0	0	multi-exon	FALSE	canonical	3	13	junction_2	31.5629881700422	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	20216884	True	NA	NA	False	ATTAAA	-31	NA	20217538	20221700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20218255_20218364_20219491_20219757_20221342
transcript_84307.known	chr7	+	667	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	41	19	0	-16	multi-exon	FALSE	canonical	3	22	junction_1	25.31578339473	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	20216922	True	NA	NA	False	ATTAAA	-12	NA	20217576	20221681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
transcript_84310.known	chr7	-	666	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	30	228	30	-228	multi-exon	FALSE	canonical	2	3	junction_3	3.77123616632825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAACTCTCTGAAAG	-20331637	True	NA	54	True	NA	NA	NA	20331747	20328528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
transcript_84312.known	chr7	-	737	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	100	3	96	2	multi-exon	FALSE	canonical	2	10	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTGATTAATTTGT	-20331571	False	NA	NA	False	AATAAA	-20	NA	20331681	20328298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20328857_20329366_20329514_20331649
transcript_84322.nic	chr7	+	2154	7	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-37	331055	-37	68	5prime_fragment	FALSE	canonical	3	13	junction_1	1.38443731048635	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTGTGTAAAAGTTT	21542408	True	NA	NA	False	AATAAA	-14	NA	21543001	21570784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185_21564398_21570068
transcript_84327.known	chr7	-	2915	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	494.491698615861	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTGTCAGTGGTA	-21934846	True	NA	-3	True	AATAAA	-25	NA	21945878	21900899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
transcript_84331.nic	chr7	-	2923	10	NIC	ENSG00000164649.20	novel	2883	10	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	543	junction_8	234.722268244571	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21945831	False	NA	-2	True	AATAAA	-26	NA	21945942	21900898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911752_21916753_21916895_21945780
transcript_84333.known	chr7	-	2883	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	192.731822892732	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21934867	True	NA	-2	True	AATAAA	-26	NA	21945899	21900898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
transcript_84337.known	chr7	-	1830	9	FSM	ENSG00000164649.20	ENST00000373934.4	1830	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	382.070653642752	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGGGGACCATCAACA	-21934852	True	NA	NA	False	ATTAAA	-11	NA	21945884	21901798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21916753_21916895_21945780
transcript_8435.nnic	chr1	-	1053	6	NNC	ENSG00000158769.18	novel	571	6	NA	NA	-26	-983	intron_retention	FALSE	non_canonical	0	0	junction_1	727.374181559945	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTTAAATCCTGAAGT	-160994104	True	NA	-8	True	AATAAA	-19	NA	161021201	160996193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_160996622_161000239_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_84351.known	chr7	-	1193	5	FSM	ENSG00000105889.16	ENST00000406890.6	1193	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	16.3859696081739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499509	True	NA	-2	True	ATTAAA	-18	NA	22500177	22419443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22419837_22492564_22492730_22493323_22493780_22494771_22494887_22500113
transcript_84352.known	chr7	-	1261	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.256095748383	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499520	True	NA	-2	True	ATTAAA	-18	NA	22500188	22419443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_84354.known	chr7	-	1054	4	FSM	ENSG00000105889.16	ENST00000483679.1	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	6.59966329107444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGTGTTTCCTAGACA	-22499533	True	NA	NA	False	NA	NA	NA	22500201	22492391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22492730_22493323_22493837_22494771_22494887_22500113
transcript_84355.known	chr7	-	1384	1	FSM	ENSG00000233476.3	ENST00000434005.1	1384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATATTATCCCTAATAC	-22511968	False	NA	NA	False	NA	NA	NA	22511999	22510615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22510600_22512000
transcript_84356.known	chr7	+	1527	6	FSM	ENSG00000136244.12	ENST00000404625.5	1527	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTGTGTCACGTGAA	22725863	True	NA	NA	False	AATAAA	-24	NA	22725883	22732002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22726259_22727178_22727282_22727443_22727635_22728692_22728807_22729513_22729661_22731405
transcript_84357.known	chr7	-	514	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3166.90830657002	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	-22769746	True	NA	-3	True	AATAAA	-16	NA	22822791	22812972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
transcript_84363.known	chr7	-	434	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	6741	junction_2	142.5	7260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-22769804	True	NA	-4	True	AATAAA	-15	NA	22822849	22812973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22813186_22817999_22818049_22822676
transcript_84365.known	chr7	-	731	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGCGGCTCTGTTGC	-22769804	True	NA	NA	False	AATAAA	-1	NA	22822849	22812627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22813186_22822676
transcript_84366.known	chr7	+	955	6	FSM	ENSG00000228649.10	ENST00000658124.1	955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.33757453113766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	22850933	True	NA	NA	False	AATATA	-33	NA	22854272	22861436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858796_22860546_22860639_22860885
transcript_84367.known	chr7	+	1063	6	FSM	ENSG00000228649.10	ENST00000661147.1	1063	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	5.88557558782486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22854199	22861436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22860885
transcript_84370.known	chr7	+	1400	5	FSM	ENSG00000228649.10	ENST00000656687.2	1408	5	8	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	6.41774882649672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGATAAGCAGCTATTA	22850914	True	NA	NA	False	AATAAA	-25	NA	22854253	22861580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546
transcript_84372.known	chr7	+	747	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.66077672302228	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	22850916	True	NA	NA	False	AATATA	-33	NA	22854255	22861436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
transcript_84373.known	chr7	+	1938	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854125	22860274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
transcript_84374.known	chr7	+	1238	4	FSM	ENSG00000228649.10	ENST00000422542.4	1238	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.83176086632785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATAAGCAGCTATT	NA	False	NA	NA	False	AATAAA	-24	NA	22854154	22861579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546
transcript_84376.known	chr7	+	1743	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	7.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	6	True	AATAAA	-20	NA	22854152	22858552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972
transcript_84377.known	chr7	+	619	3	FSM	ENSG00000228649.10	ENST00000671680.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATAGTCTTTTTTTTTT	22854739	False	NA	NA	False	NA	NA	NA	22854762	22857354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854965_22856521_22856557_22856972
transcript_84379.known	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	50.3041985990654	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	-22999301	True	NA	55	True	ACTAAA	-38	NA	23014084	22944508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84380.nic	chr7	-	3291	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-3	-40	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	70.3113500824243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGGTCCTTTTGGCTAT	-22999350	True	NA	-37	True	AATAAA	-17	NA	23014133	22944315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84386.nic	chr7	-	2317	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-3	282	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	70.3113500824243	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGGTTATGTCTCAT	-22999350	True	NA	-8	True	AATAAA	-19	NA	23014133	22945289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84396.known	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	30.4448499567478	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	-22999291	True	NA	-1	True	AATAAA	-24	NA	23014074	22978163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84400.known	chr7	+	3165	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	230.072859462295	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	23093695	True	NA	7	True	AATAAA	-15	NA	23105757	23175302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_84404.known	chr7	+	5619	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_9	181.39749171364	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTATATTCCTTTTGC	23093722	True	NA	NA	False	AATAAA	-16	NA	23105784	23177914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_84406.known	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	222.444622322051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	23106269	False	NA	-23	True	AATGAA	-31	NA	23106294	23175388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_84415.nic	chr7	+	1752	8	NIC	ENSG00000122550.18	novel	5619	11	NA	NA	-24	345	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	257.952297441023	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTTATTTGGATTCC	23093671	True	NA	13	True	AATAAA	-16	NA	23105733	23156513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
transcript_84421.nic	chr7	+	1561	6	ISM	ENSG00000122550.18	ENST00000339077.10	5619	11	-51	33414	-24	599	5prime_fragment	FALSE	canonical	3	445	junction_4	174.438069239487	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTGTTGCTTTTCTTTC	23093671	True	NA	NA	False	AATAAA	-19	NA	23105733	23144500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850
transcript_84422.nic	chr7	+	1143	6	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	337.874888087292	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGCATCACTACTCTT	23093683	True	NA	17	True	AATAAA	-20	NA	23105745	23126049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84424.known	chr7	+	1233	6	FSM	ENSG00000122550.18	ENST00000410047.1	1233	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	353.911288319545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATGCTAGCATCACT	23106265	True	NA	11	True	AATAAA	-14	NA	23106297	23126043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106795_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84425.known	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	207.588986942949	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	23093722	True	NA	13	True	AATAAA	-16	NA	23105784	23126045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84426.known	chr7	+	588	5	FSM	ENSG00000122550.18	ENST00000479700.1	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	338.832831201464	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCCAAGACCCCCAGTGA	23106464	True	NA	NA	False	AATGAA	-44	NA	23106655	23125887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84429.known	chr7	+	1653	8	FSM	ENSG00000136243.18	ENST00000438012.5	1653	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	74.4722931631596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178954	True	NA	10	True	AATAAA	-18	NA	23182023	23201006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197231_23199457_23199543_23200167
transcript_84430.known	chr7	+	1329	8	FSM	ENSG00000136243.18	ENST00000413919.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	72.8588235100273	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAAAGCCTCCACCTC	23178994	True	NA	NA	False	AAGAAA	-18	NA	23182063	23200705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197248_23199457_23199543_23200167
transcript_84433.known	chr7	+	1571	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	15.9756759550957	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178978	True	NA	10	True	AATAAA	-18	NA	23182047	23201006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_84436.known	chr7	+	2010	7	FSM	ENSG00000136243.18	ENST00000485250.5	2010	7	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_1	54.3588896951445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATGGAACTGAAAAAT	23181830	False	NA	-41	True	AAAAAG	-44	NA	23181840	23200955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182490_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_84439.nnic	chr7	+	1576	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	63.480390673026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178896	True	NA	10	True	AATAAA	-18	NA	23181965	23201006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
transcript_84440.known	chr7	+	1285	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	58.2635391990566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	23178996	True	NA	-29	True	NA	NA	NA	23182065	23200967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_84445.nnic	chr7	+	1489	5	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	-58	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	77.953110906493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178896	True	NA	10	True	AATAAA	-18	NA	23181965	23201006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23199457_23199543_23200167
transcript_84447.known	chr7	+	739	3	FSM	ENSG00000136243.18	ENST00000497500.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	16.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTTGATTCCCTGTATG	23178968	True	NA	NA	False	AATAAA	-19	NA	23182037	23187392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051
transcript_84448.known	chr7	+	808	2	FSM	ENSG00000136235.17	ENST00000468723.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAACCCAGGTTAACTG	23273192	True	NA	NA	False	NA	NA	NA	23273292	23274550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23273615_23274064
transcript_84449.known	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	11.9991496297335	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-23448675	True	NA	-27	True	AATAAA	-22	NA	23470491	23310208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_84452.nnic	chr7	-	3477	8	NNC	ENSG00000136231.14	novel	4274	15	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	48.7572077350872	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-23448651	True	NA	-27	True	AATAAA	-22	NA	23470467	23310208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343847_23469935
transcript_84454.known	chr7	-	500	5	FSM	ENSG00000136231.14	ENST00000476938.5	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	11.1214882097676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTCAATATATCTT	-23469788	False	40	NA	False	AGTAAA	-24	NA	23470016	23361340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_84455.nnic	chr7	+	307	3	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGGACAGACGTGTTTT	23470338	True	NA	7	True	AATAAA	-20	NA	23470545	23472432	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr7_+_23470663_23470991_23471079_23472329
transcript_84459.known	chr7	+	2905	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	57.659922534345	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	23289222	True	NA	NA	False	TTTAAA	-35	NA	23299338	23311729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
transcript_8446.nnic	chr1	-	564	4	NNC	ENSG00000215845.11	novel	567	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_3	685.733346295936	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019851	True	NA	-13	True	AATAAA	-16	NA	161039000	161037630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_161037827_161037912_161038076_161038550_161038635_161038879
transcript_84465.known	chr7	+	892	1	FSM	ENSG00000232818.2	ENST00000439199.1	892	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTTATGCAAGAAAAAT	23490326	True	NA	NA	False	NA	NA	NA	23490472	23491364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23490500_23491400
transcript_8447.known	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_3	246.841379567257	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019815	True	NA	-13	True	AATAAA	-16	NA	161038964	161037630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
transcript_84474.known	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	204.774533023518	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
transcript_84478.known	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	217.685804256961	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
transcript_84479.known	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_7	84.8997007278204	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-23517754	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
transcript_8448.known	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	725.545924727642	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019801	True	NA	-13	True	AATAAA	-16	NA	161038950	161037630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
transcript_84488.known	chr7	+	2470	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	6.0184900284226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	23596826	True	NA	56	True	AATAAA	-19	NA	23597381	23644708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
transcript_84489.known	chr7	+	625	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCATGTTTTTCTACT	23596860	True	NA	NA	False	AATAAA	-22	NA	23597415	23602220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23597606_23597966_23598052_23601870
transcript_8450.known	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	605	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019828	True	NA	-13	True	AATAAA	-16	NA	161038977	161037630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161037827_161037912_161038076_161038879
transcript_84504.known	chr7	+	761	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	95.7613700820952	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGGAGAAATTAAAACC	23677918	True	NA	NA	False	NA	NA	NA	23680183	23702167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_84506.known	chr7	+	1136	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	96.8952398211594	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677918	True	NA	16	True	AATAAA	-25	NA	23680183	23702650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_84507.known	chr7	+	1403	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	78.39589700148	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677933	True	NA	16	True	AATAAA	-25	NA	23680198	23702650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_84508.known	chr7	+	555	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.89897948556636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	24284036	True	NA	19	True	AATAAA	-18	NA	24284189	24291862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
transcript_84509.known	chr7	+	565	3	FSM	ENSG00000122585.8	ENST00000405982.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTGTTTAAATAA	24285031	True	NA	-19	True	NA	NA	NA	24285106	24291824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24285429_24289498_24289580_24291662
transcript_84510.known	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	35.8873351817362	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	24573071	True	NA	NA	False	AATAAA	-18	NA	24573451	24694193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_84515.known	chr7	+	1191	8	FSM	ENSG00000105926.16	ENST00000430180.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	88.0315342386361	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	24573991	False	NA	32	True	AAAAAG	-6	NA	24574012	24666060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_84517.known	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.55050355892044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-24756833	True	NA	-4	True	ATTAAA	-18	NA	24757464	24698354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_84518.nnic	chr7	-	2052	9	NIC	ENSG00000105928.16	novel	2250	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	13.3176339865608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-24756828	True	NA	-4	True	ATTAAA	-18	NA	24757459	24698354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_24699260_24702759_24702834_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_84519.nic	chr7	-	1220	8	NIC	ENSG00000105928.16	novel	1848	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	13.6172159940485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTTTGTTCTTTT	-24756828	True	NA	1	True	TATAAA	-17	NA	24757459	24707278	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_24707426_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_8452.known	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	139	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019788	True	NA	-13	True	AATAAA	-16	NA	161038937	161037630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161038076_161038550_161038674_161038879
transcript_84521.known	chr7	-	1997	9	FSM	ENSG00000105928.16	ENST00000409970.6	1997	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	13.6473440639562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTATTCTATTAAAGGA	-24756844	True	NA	-38	True	NA	NA	NA	24757475	24698388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24757395
transcript_84523.known	chr7	-	974	3	FSM	ENSG00000172115.9	ENST00000409409.5	974	3	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_2	1520.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAAGATTCACCTGTGT	-25039190	True	NA	NA	False	AATATA	-38	NA	25125249	25123306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_25123850_25123950_25124128_25124995
transcript_84526.known	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	3103	junction_1	213	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	-25039201	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_25123850_25123950_25124128_25125199
transcript_84527.known	chr7	-	747	1	FSM	ENSG00000270933.1	ENST00000602992.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTCTTGTGTTCATTTG	-25949378	False	NA	0	True	AATAAA	-16	NA	25949403	25948656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_25948700_25949400
transcript_84530.known	chr7	-	2438	14	FSM	ENSG00000122566.22	ENST00000676746.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	4115.03024642518	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26200997	False	NA	-19	True	AATAAA	-9	NA	26201047	26189940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_84539.known	chr7	-	2656	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	3828.05505718417	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201251	False	NA	-19	True	AATAAA	-9	NA	26201301	26189940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8454.known	chr1	-	813	2	FSM	ENSG00000215845.11	ENST00000486084.1	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGCTGGGAGGTGAT	-161019767	True	NA	NA	False	NA	NA	NA	161038916	161037897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161038674_161038879
transcript_84541.known	chr7	-	2463	13	FSM	ENSG00000122566.22	ENST00000678697.1	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3377.0898673595	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	-26201251	False	NA	-21	True	AATAAA	-7	NA	26201301	26189942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26192300_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84542.known	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	3874.65740689849	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	-26115624	True	NA	-1	True	AATAAA	-18	NA	26200746	26190124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_84543.known	chr7	-	4044	13	FSM	ENSG00000122566.22	ENST00000679123.1	4044	13	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	3511.78146861865	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201180	True	NA	38	True	AAGAAA	-2	NA	26201397	26189665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_84546.known	chr7	-	3522	13	FSM	ENSG00000122566.22	ENST00000678431.1	3522	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3355.02498334795	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	-26201431	False	NA	-21	True	AATAAA	-7	NA	26201481	26189942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26191421_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84552.known	chr7	-	2612	13	FSM	ENSG00000122566.22	ENST00000678998.1	2612	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3511.93843276837	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGAATATCAGTGTT	-26201251	False	NA	-27	True	NA	NA	NA	26201301	26189730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26191129_26192300_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84565.known	chr7	-	3622	12	FSM	ENSG00000122566.22	ENST00000679243.1	3622	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	2824.46117438704	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATACTTGGTGTAAT	-26201431	False	NA	-8	True	AATAAA	-11	NA	26201481	26190131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190457_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84568.known	chr7	-	2348	12	FSM	ENSG00000122566.22	ENST00000678779.1	2348	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3517.157746188	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	-26201251	False	NA	-35	True	NA	NA	NA	26201301	26189956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8457.known	chr1	-	1807	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	4.10365690573664	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-161042530	True	NA	NA	False	GATAAA	-15	NA	161045977	161039250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_84573.known	chr7	-	2949	12	FSM	ENSG00000122566.22	ENST00000676524.1	2949	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	3428.47247869807	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201251	False	NA	-19	True	AATAAA	-9	NA	26201301	26189940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84575.known	chr7	-	3850	12	FSM	ENSG00000122566.22	ENST00000679021.1	3850	12	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	3556.63194284417	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26200997	False	NA	38	True	AAGAAA	-2	NA	26201047	26189665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_84578.known	chr7	-	2870	12	FSM	ENSG00000122566.22	ENST00000676497.1	2870	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3568.42942974095	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	-26201251	False	NA	-35	True	NA	NA	NA	26201301	26189956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84579.known	chr7	-	3754	12	FSM	ENSG00000122566.22	ENST00000678449.1	3754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2828.37831642559	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201431	False	NA	-19	True	AATAAA	-9	NA	26201481	26189940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8458.known	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.53431361950185	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	-161042515	True	NA	NA	False	NA	NA	NA	161045962	161039919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_84599.known	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_11	3045.63814371953	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_84606.known	chr7	-	4068	11	FSM	ENSG00000122566.22	ENST00000677906.1	4068	11	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2677.71443772483	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84608.known	chr7	-	3730	11	FSM	ENSG00000122566.22	ENST00000678962.1	3730	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2891.45912819116	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201251	False	NA	-19	True	AATAAA	-9	NA	26201301	26189940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84615.known	chr7	-	4106	11	FSM	ENSG00000122566.22	ENST00000356674.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_10	3105.30703151878	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGCACTGTATATTC	-26200997	False	NA	-20	True	AATAAA	-8	NA	26201047	26189941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_8462.known	chr1	-	990	9	FSM	ENSG00000158773.14	ENST00000496363.5	990	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.85478598627732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCACCTTCCTTAGATG	-161042465	True	NA	NA	False	NA	NA	NA	161045912	161040439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_84649.known	chr7	-	3628	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	0	0	0	multi-exon	FALSE	canonical	3	6061	junction_10	1239.49685356599	6054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8466.nic	chr1	+	1142	5	NIC	ENSG00000162755.14	novel	1333	4	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	21.0059515376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	NA	False	NA	16	True	ATTAAA	-19	NA	161098323	161100346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161098405_161098665_161099063_161099345_161099506_161099578_161099797_161100060
transcript_84666.known	chr7	-	4269	10	FSM	ENSG00000122566.22	ENST00000676932.1	4269	10	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2751.97113195453	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192578_26193250_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_84668.known	chr7	-	4333	10	FSM	ENSG00000122566.22	ENST00000677839.1	4333	10	0	0	0	0	multi-exon	FALSE	canonical	3	6061	junction_9	1238.36619765971	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATATTCAGCGTTTGA	-26201251	False	NA	-11	True	AATAAA	-17	NA	26201301	26189932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8467.known	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.4537111889553	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	161097818	True	NA	-32	True	TATAAA	-16	NA	161098360	161100298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_8468.nic	chr1	+	1129	5	NIC	ENSG00000162755.14	novel	1347	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	19.8415599185145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097852	True	NA	16	True	ATTAAA	-19	NA	161098394	161100346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161098482_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_8471.known	chr1	+	921	4	FSM	ENSG00000162755.14	ENST00000469647.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.6384431561566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTGTCTCTGAAATT	161097820	True	NA	13	True	ATTAAA	-16	NA	161098362	161100343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161098405_161098665_161099063_161099597_161099797_161100060
transcript_8474.known	chr1	+	1333	4	FSM	ENSG00000162755.14	ENST00000392192.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.5843639350783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097851	True	NA	16	True	ATTAAA	-19	NA	161098393	161100346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161099063_161099345_161099506_161099578_161099797_161100060
transcript_8475.known	chr1	+	1347	4	FSM	ENSG00000162755.14	ENST00000368011.9	1347	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	4.32049379893857	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097818	True	NA	16	True	ATTAAA	-19	NA	161098360	161100346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161099063_161099345_161099506_161099597_161099797_161100060
transcript_84783.known	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1504.55370126825	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26201065	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_84789.known	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3707	junction_1	195.776811701488	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	26168194	True	NA	9	True	ATTAAA	-19	NA	26201744	26213607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_84792.known	chr7	+	1717	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	1547.40771614982	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26168214	True	NA	32	True	AATAAA	-24	NA	26201764	26213356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
transcript_8481.known	chr1	-	408	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-161093885	True	NA	0	True	ATTAAA	-20	NA	161118055	161100555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161100860_161117951
transcript_8482.known	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	123.083530805529	2515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	-161093867	True	NA	-5	True	ATTAAA	-15	NA	161118037	161100560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
transcript_8483.known	chr1	+	1485	7	FSM	ENSG00000158793.14	ENST00000368009.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	23.4852199384114	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTCCCAGCCCCATT	161115410	True	NA	4	True	AATAAA	-14	NA	161118104	161121194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84832.known	chr7	+	2258	1	FSM	ENSG00000050344.9	ENST00000606261.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACCAAATTTACCTTA	NA	False	NA	35	True	AATAAA	-45	NA	26184059	26186317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26184100_26186300
transcript_84833.known	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.8263142336497	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	26291169	True	NA	60	True	AATATA	-19	NA	26291861	26374383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_84834.known	chr7	-	3839	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	3.73794358200097	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	-26864229	True	NA	-5	True	AATAAA	-18	NA	26864590	26667067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
transcript_84836.known	chr7	+	671	2	FSM	ENSG00000233429.9	ENST00000434063.3	671	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATTAGAAGCCCTAGT	NA	False	NA	NA	False	AAAAAG	-37	NA	27096093	27100154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27096389_27099778
transcript_8484.nic	chr1	+	1405	7	NIC	ENSG00000158793.14	novel	1518	7	NA	NA	3	-126	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	81.9186588431883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGACATCGCCTTT	161115394	True	NA	14	True	CATAAA	-4	NA	161118088	161121067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161118210_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84840.nnic	chr7	-	1734	8	NNC	ENSG00000106049.9	novel	1878	8	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	99.2323597647955	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	-27657984	False	4765	-6	True	AATAAA	-16	NA	27662749	27525441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649624_27662697
transcript_84841.known	chr7	-	1878	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	22.8026135272576	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	-27658118	True	NA	-6	True	AATAAA	-16	NA	27662883	27525441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_84842.nnic	chr7	-	1389	6	NNC	ENSG00000106049.9	novel	570	2	NA	NA	-53	-9879	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.226798899348	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTCGAAGGACATTTA	-27658171	True	NA	NA	False	NA	NA	NA	27662936	27541132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_27541756_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_84845.known	chr7	+	2478	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	0	0	0	0	multi-exon	TRUE	canonical	3	936	junction_13	118.328577882733	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	27730081	True	NA	63	True	AGTAAA	-15	NA	27740094	27828881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_84849.known	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_14	253.833329913548	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	27730148	True	NA	19	True	ATTAAA	-31	NA	27740161	27829767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
transcript_84855.known	chr7	+	2221	16	FSM	ENSG00000106052.14	ENST00000416801.6	2221	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	290.100779423672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	27730133	True	NA	46	True	AATATA	-11	NA	27740146	27828864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_84857.nnic	chr7	+	2262	15	NIC	ENSG00000106052.14	novel	2478	17	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	138	junction_13	273.762596392702	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	27730102	True	NA	63	True	AGTAAA	-15	NA	27740115	27828881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27827737_27827821_27828627
transcript_8486.nnic	chr1	+	1332	7	NNC	ENSG00000158793.14	novel	1485	7	NA	NA	-4	-126	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	81.9186588431883	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGACATCGCCTTT	161115406	True	NA	14	True	CATAAA	-4	NA	161118100	161121067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_161118179_161118815_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84867.known	chr7	-	3173	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	6.86931583201704	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGCTCTTTATTTT	NA	False	NA	-21	True	AATAAA	-19	NA	28180795	27830576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
transcript_8487.known	chr1	+	1518	7	FSM	ENSG00000158793.14	ENST00000392190.9	1518	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	82.2869302434408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	161115423	True	NA	3	True	AATAAA	-13	NA	161118117	161121193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118226_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84872.known	chr7	+	2001	7	FSM	ENSG00000146592.17	ENST00000396298.6	2001	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.25830573921179	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAAACCTC	28685879	True	NA	NA	False	AAGAAA	-17	NA	28685980	28820000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_28686198_28718752_28718880_28724221_28724333_28804198_28804523_28809186_28809415_28818070_28818180_28819115
transcript_8488.nic	chr1	+	1419	7	NIC	ENSG00000158793.14	novel	1485	7	NA	NA	0	-126	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	82.6552411459122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGACATCGCCTTT	161115410	True	NA	14	True	CATAAA	-4	NA	161118104	161121067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161118240_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84881.known	chr7	-	1739	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	137.376813505369	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	-29142948	True	NA	38	True	AATAAA	-18	NA	29146497	28995630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
transcript_84882.known	chr7	-	2087	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_12	62.0785233035996	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATGAGTCAATTCTT	-29142988	True	NA	NA	False	AATAAA	-17	NA	29146537	28995234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_84894.nic	chr7	-	1455	11	NIC	ENSG00000106066.15	novel	2087	13	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	166.620406913439	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGAGCTTTTGTTTTTG	-29143028	True	NA	35	True	AATAAA	-15	NA	29146577	28995633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_28995883_29030576_29030760_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_84904.known	chr7	+	620	2	FSM	ENSG00000285412.1	ENST00000582692.2	620	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAAACAAAACCTGCA	NA	False	NA	NA	False	AAAAAG	-1	NA	29122273	29126579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_29122643_29126328
transcript_84905.known	chr7	+	425	3	FSM	ENSG00000106069.24	ENST00000461824.1	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGGGGTACCCTGTA	29146097	True	NA	NA	False	ATTAAA	-18	NA	29146588	29148657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_29146746_29146848_29146961_29148501
transcript_84909.nnic	chr7	-	1177	6	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-8	4039	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	8.18290901819151	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563395	True	NA	-2	True	AATAAA	-20	NA	29563699	29510184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_29510412_29510502_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_84915.nnic	chr7	-	1268	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-8	4039	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	4.54835134966506	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563395	True	NA	-2	True	AATAAA	-20	NA	29563699	29510184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_84916.nnic	chr7	-	1049	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-8	4032	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.70502447189084	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCACTAAGTTTCGGGA	-29563395	True	NA	-9	True	AATAAA	-13	NA	29563699	29510191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_29510432_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_84920.known	chr7	-	1434	3	FSM	ENSG00000223813.4	ENST00000447171.2	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACAGTATCAAGAA	-29563359	True	NA	NA	False	AATAAA	-16	NA	29563663	29514223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_29515318_29561858_29561923_29563387
transcript_84921.known	chr7	+	4184	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	46	-5	46	5	multi-exon	FALSE	canonical	1	1	junction_4	7.06664701255129	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCGTTTCCTTGTTAAA	29806080	True	NA	28	True	AATAAA	-22	NA	29806553	29917066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
transcript_84922.known	chr7	+	2140	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_13	62.275015172964	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	30025644	True	NA	19	True	AATAAA	-16	NA	30028360	30118345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
transcript_84924.known	chr7	-	5254	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	39.3840328155501	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGGAGTGGCCTCT	-29980756	True	NA	-10	True	AATAAA	-16	NA	29989801	29920108	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_84926.known	chr7	-	703	5	FSM	ENSG00000106080.11	ENST00000412494.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	63.103090257134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTTATACAATGT	-30023958	False	NA	NA	False	AATATA	-41	NA	30026419	30014670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30014894_30018995_30019124_30020212_30020305_30022664_30022817_30026311
transcript_84929.nnic	chr7	-	1249	4	NNC	ENSG00000106080.11	novel	751	2	NA	NA	-2	4664	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	55.7554182718296	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTCTGTCATTCTGT	-30024243	True	NA	NA	False	NA	NA	NA	30026704	30005922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_30006499_30018995_30019124_30022664_30022817_30026311
transcript_84930.known	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	8.16496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-30024241	True	NA	-4	True	AATAAA	-18	NA	30026702	30010586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
transcript_84938.known	chr7	+	614	2	FSM	ENSG00000251660.1	ENST00000511893.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTAGACTTTGACCAAA	NA	False	NA	NA	False	CATAAA	-19	NA	30157530	30159534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30157596_30158985
transcript_84939.known	chr7	+	2536	18	FSM	ENSG00000106105.15	ENST00000675529.1	2536	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	469.439244367415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	30568251	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_84940.known	chr7	-	556	7	FSM	ENSG00000196295.13	ENST00000582549.1	556	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6679686705368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCACCTGACTTCCCA	-30594074	True	NA	NA	False	NA	NA	NA	30594758	30578069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30584422_30584454_30584710_30584809_30585329_30585480_30594710
transcript_84945.known	chr7	-	431	5	FSM	ENSG00000196295.13	ENST00000583664.5	431	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8.78564169540279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCTGACTTCCCACT	-30594076	True	NA	NA	False	NA	NA	NA	30594760	30578067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30585329_30585480_30594710
transcript_84946.known	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_3	167.476034769821	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
transcript_84947.known	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	277.64045494528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	-30496400	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
transcript_84949.known	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_1	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-30594090	True	NA	-3	True	AATAAA	-39	NA	30594774	30577499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
transcript_84953.known	chr7	-	1032	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	301	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGTCTCTACTAAA	-30496425	True	NA	-7	True	AATAAA	-15	NA	30504841	30496622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30500535_30500682_30504568
transcript_84954.known	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	-30496385	True	NA	15	True	AATAAA	-5	NA	30504801	30496632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30504568
transcript_84955.known	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	288.5	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30498802_30498939_30504568
transcript_84956.known	chr7	+	2276	17	FSM	ENSG00000106105.15	ENST00000676140.1	2276	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	421.168909108923	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	30568297	True	NA	NA	False	AAAAAG	-32	NA	30594877	30633874	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615897_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_84957.known	chr7	+	2281	17	FSM	ENSG00000106105.15	ENST00000674815.1	2281	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	418.134655157582	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568262	True	NA	19	True	ATTAAA	-22	NA	30594842	30634033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30594953_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_84958.known	chr7	+	1252	7	FSM	ENSG00000106105.15	ENST00000454308.6	1252	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	464.759585401121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCACTGTTAGATT	30568283	True	NA	NA	False	AATAAA	-29	NA	30594863	30605448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30604989
transcript_84959.known	chr7	+	2733	18	FSM	ENSG00000106125.14	ENST00000265299.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	8.72097261329258	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGGCCCAGGCTCAT	30771009	True	NA	NA	False	TATAAA	-16	NA	30771416	30892387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242_30872307_30875494_30875657_30882180_30882362_30882920_30882994_30891956
transcript_8496.nic	chr1	+	1278	6	NIC	ENSG00000158793.14	novel	1485	7	NA	NA	3	-126	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	83.2216318032758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGACATCGCCTTT	161115394	True	NA	14	True	CATAAA	-4	NA	161118088	161121067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161118179_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84961.nic	chr7	+	668	2	ISM	ENSG00000106128.19	ENST00000461424.5	1054	9	11855	0	-257	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	30982859	True	NA	NA	False	AATAAA	-18	NA	30983823	30985216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_30984360_30985084
transcript_84962.known	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	8.12403840463596	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	31686336	True	NA	15	True	AATAAA	-15	NA	31687214	31708455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
transcript_84963.known	chr7	+	569	4	FSM	ENSG00000106341.11	ENST00000409146.3	569	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	15.5205956357638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGATGTATGCCAT	31686336	True	NA	NA	False	NA	NA	NA	31687214	31707409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_31687307_31692405_31692524_31696964_31697118_31707203
transcript_84965.nnic	chr7	-	676	3	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTTGAGAGACTTG	-32464832	True	NA	NA	False	AATAAA	-18	NA	32464977	32455712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr7_-_32456030_32464524_32464789_32464882
transcript_84968.known	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	1060.04230458034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32490758	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
transcript_84969.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1071.72862703205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485211	True	NA	-6	True	AATAAA	-16	NA	32490361	32487034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
transcript_8497.known	chr1	+	1749	6	FSM	ENSG00000158793.14	ENST00000368007.8	1749	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	89.9444272870754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	161115422	True	NA	3	True	AATAAA	-13	NA	161118116	161121193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118552_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_84970.known	chr7	-	2214	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_4	68.1945745642569	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGTTTTCTGCGTTTG	-32485230	True	NA	-5	True	NA	NA	NA	32490380	32485337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
transcript_84971.known	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	1055.71406521842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-32494824	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
transcript_84979.known	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1143.69586089232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485230	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
transcript_8498.known	chr1	-	2344	6	FSM	ENSG00000158796.17	ENST00000368006.8	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	46.2791529740984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	-161129745	True	NA	-9	True	AATAAA	-20	NA	161132667	161120973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132550
transcript_84980.nnic	chr7	-	505	4	NNC	ENSG00000106355.10	novel	504	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	1128.64648534822	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485250	True	NA	-6	True	AATAAA	-16	NA	32490400	32487034	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_32487294_32487684_32487758_32489252_32489345_32490319
transcript_84988.known	chr7	+	6987	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_11	16.4673414166748	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCTAGAAGTACCCTG	32488239	True	NA	27	True	AATAAA	-36	NA	32495488	32588726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_84989.nnic	chr7	+	2423	16	NNC	ENSG00000105778.20	novel	6987	16	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	33.442089248929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAATTTTGAGTTCTGA	32488256	True	NA	5	True	ATTAAA	-18	NA	32495505	32584167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570167_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_84992.known	chr7	+	4336	15	FSM	ENSG00000105778.20	ENST00000409301.5	4336	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	36.2644060044714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTAATATCACTTG	32488276	True	NA	11	True	AATAAA	-21	NA	32495525	32586166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580801_32580891_32583791
transcript_84995.known	chr7	-	3608	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	6.0184900284226	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-32891731	False	NA	-19	True	AATAAA	-15	NA	32891760	32868171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
transcript_85002.known	chr7	-	1742	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	102.625653183588	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058989	True	NA	-19	True	AATAAA	-24	NA	33062796	33014129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_85003.known	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_8	29.2123154679666	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058969	True	NA	-19	True	AATAAA	-24	NA	33062776	33014129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
transcript_85008.known	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	28.5965032827442	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-33106874	True	NA	0	True	AATAAA	-23	NA	33109404	33094796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
transcript_85009.known	chr7	+	3996	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_14	133.438575029056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTCTCAGTACAA	33129186	True	NA	6	True	AATAAA	-20	NA	33129563	33606069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85013.nic	chr7	+	2086	10	NIC	ENSG00000122507.21	novel	1252	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	21.1712593442672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTTGATTGGTATC	33129265	True	NA	NA	False	ATTAAA	-15	NA	33129294	33314571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33314259
transcript_85014.nnic	chr7	+	1733	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-77	0	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	38.2034837788324	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	33348470	True	NA	NA	False	AATAAA	-20	NA	33351849	33605632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85020.nic	chr7	+	1679	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	84.2614977317636	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	33348509	True	NA	NA	False	AATAAA	-20	NA	33351888	33605632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85026.nnic	chr7	+	2303	7	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-4	1186	combination_of_known_splicesites	FALSE	canonical	3	27	junction_6	119.853614417292	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCTGTTATTTTTT	33348543	True	NA	3	True	CATAAA	-18	NA	33351922	33391834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33390236
transcript_85029.nnic	chr7	+	2241	6	NIC	ENSG00000122507.21	novel	549	5	NA	NA	20	-944	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	45.1353519981843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTCATGGTT	33348567	True	NA	NA	False	NA	NA	NA	33351946	33389704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_8503.known	chr1	-	954	6	FSM	ENSG00000158796.17	ENST00000463227.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	126.214103807776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGCGTGACTACAT	-161132445	False	NA	NA	False	NA	NA	NA	161132476	161122332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
transcript_85033.known	chr7	+	549	5	FSM	ENSG00000122507.21	ENST00000627264.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	116.362579895772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAAGAACTCTTA	33348547	True	NA	NA	False	GATAAA	-6	NA	33351926	33388007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_8505.known	chr1	-	964	5	FSM	ENSG00000158796.17	ENST00000464113.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	133.529959185196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCAAGCTGCTGGTA	-161129666	True	NA	NA	False	NA	NA	NA	161132588	161122241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
transcript_85050.known	chr7	+	4399	13	FSM	ENSG00000122545.21	ENST00000399034.7	4399	13	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	285.620219386202	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCTCCAATGAATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	35800931	35907105	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_85052.known	chr7	+	1584	12	FSM	ENSG00000122545.21	ENST00000435235.6	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	366.627155396842	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGTACCTTTCCTACA	35799720	True	NA	NA	False	NA	NA	NA	35801038	35904500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35801271_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_85059.known	chr7	+	583	6	FSM	ENSG00000122545.21	ENST00000634600.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_1	532.245582414735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGAATGCCAACAGTT	35783518	True	NA	NA	False	AAAAAG	-42	NA	35801215	35879910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35801271_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822
transcript_85060.known	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	89.0889405003264	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384746	True	NA	38	True	AATAAA	-23	NA	36389861	36453791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_85062.nic	chr7	+	806	3	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	54285	0	3085	5prime_fragment	FALSE	canonical	3	418	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGAGTATCCTTTGCT	36384705	True	NA	NA	False	AATAAA	-18	NA	36389820	36399506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_36390045_36396265_36396420_36399078
transcript_85063.nic	chr7	+	1589	2	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-2	56163	-2	1207	5prime_fragment	FALSE	canonical	3	431	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAAGTGTAGTGGCTC	36384703	True	NA	NA	False	AATAAA	-22	NA	36389818	36397628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_36390045_36396265
transcript_85064.known	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_21	21.803180612178	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	NA	False	NA	NA	False	NA	NA	NA	37449223	36855550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_85070.known	chr7	+	1365	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	133.492497592862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAATAAAATCTG	38174579	True	NA	-24	True	NA	NA	NA	38178350	38230381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_85076.known	chr7	+	1703	9	FSM	ENSG00000010270.14	ENST00000009041.12	1703	9	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	36.4243651283039	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCTGTTTTTTCA	38174473	True	NA	7	True	ATTAAA	-14	NA	38178244	38230669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_85079.known	chr7	+	1341	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	113.590025431598	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	38174491	True	NA	-26	True	NA	NA	NA	38178262	38230379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_85096.known	chr7	-	3145	20	FSM	ENSG00000078053.17	ENST00000325590.9	3145	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	8.11789855863636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGATGAGTCTTTT	-38630800	True	NA	-9	True	AATAAA	-30	NA	38631420	38383703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
transcript_85097.known	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_15	17.0430128121258	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-38903776	True	NA	NA	False	AATAAA	-13	NA	38909191	38722973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_85100.nnic	chr7	-	1545	14	NNC	ENSG00000006715.16	novel	5854	29	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.9982248205584	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTTAATGGTCTATT	-38903776	True	NA	NA	False	AATAAA	-8	NA	38909191	38722978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_38723458_38772600_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_85113.known	chr7	+	871	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	20	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	39562648	True	NA	NA	False	ATTAAA	-17	NA	39566403	39572881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39566548_39570505_39570628_39572276
transcript_85114.nic	chr7	+	1388	3	NIC	ENSG00000241127.8	novel	871	3	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	39562615	True	NA	NA	False	ATTAAA	-17	NA	39566370	39572881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_39567032_39570505_39570628_39572276
transcript_85115.known	chr7	+	660	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAATTTACTTTAGTCC	39562629	True	NA	NA	False	GATAAA	-4	NA	39566384	39571002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39566548_39570505
transcript_85117.known	chr7	+	2787	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_3	31.2209865314983	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	39614901	True	NA	16	True	AATAAA	-16	NA	39623571	39708120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
transcript_8512.known	chr1	+	888	6	FSM	ENSG00000143222.12	ENST00000368003.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_5	69.5258225409811	1080	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	161143167	True	NA	19	True	AATAAA	-18	NA	161153977	161158856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
transcript_85120.known	chr7	+	705	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATTTACTTTAAAA	39614894	True	NA	95	True	ACTAAA	-24	NA	39623564	39706391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39623826_39696684_39696860_39706122
transcript_85123.known	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	-40122638	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_40133260_40134228
transcript_85124.known	chr7	+	1617	14	FSM	ENSG00000175600.16	ENST00000335693.9	1617	14	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_8	11.4555999070659	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134384	True	NA	14	True	AATAAA	-25	NA	40135004	40860763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_85126.known	chr7	-	2430	9	FSM	ENSG00000256646.8	ENST00000442788.5	2430	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3958.81971046927	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTTTCATTGTATTG	-42890179	True	NA	-1	True	ATTAAA	-19	NA	42932174	42909272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42910922_42917513_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_85129.known	chr7	-	1453	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	5187.09591046618	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	-42890159	True	NA	-27	True	AATAAA	-3	NA	42932154	42916881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
transcript_85133.known	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	11145	junction_7	556.825623970561	7191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	-42890179	True	NA	-6	True	AATAAA	-24	NA	42932174	42916860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_85142.known	chr7	-	1289	7	FSM	ENSG00000106588.12	ENST00000457444.6	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	4377.17160072829	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGGCTTAAGGCTC	-42890171	True	NA	-10	True	AATAAA	-20	NA	42932166	42916864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42927382_42927460_42932117
transcript_85146.known	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_5	4718.70369487214	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-42890190	True	NA	-41	True	AATAAA	-12	NA	42932185	42917412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
transcript_85148.known	chr7	-	1823	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTTCATTGTAT	-42911998	False	NA	-3	True	ATTAAA	-17	NA	42912090	42909274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42910922_42911914
transcript_85151.known	chr7	-	2784	7	FSM	ENSG00000106588.12	ENST00000678407.1	2784	7	0	0	0	0	multi-exon	FALSE	canonical	3	11145	junction_6	532.449058596219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATAAGTGCTTGAAATAAA	-42890179	True	NA	-49	True	TTTAAA	-12	NA	42932174	42916903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_8516.known	chr1	+	2315	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_11	65.4823703633456	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156574	True	NA	NA	False	AATAAA	-16	NA	161159499	161165723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_85163.known	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1207	junction_1	5.5	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	42919633	True	NA	21	True	AATAAA	-24	NA	42932375	42937857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_42932517_42934954_42935137_42937321
transcript_85165.known	chr7	+	2734	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	569.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGATTCTTTATGTT	42919633	True	NA	NA	False	AGTAAA	-17	NA	42932375	42937627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_42932517_42934954_42937242_42937321
transcript_8517.nnic	chr1	+	2411	14	NNC	ENSG00000143258.16	novel	2514	9	NA	NA	219	0	intron_retention	FALSE	non_canonical	1	4	junction_1	75.151680938812	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161159737	False	NA	NA	False	AATAAA	-16	NA	161159755	161165723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_161160031_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_85177.known	chr7	-	1737	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	435.677250572791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTGAATGTCATT	-43714600	True	NA	-3	True	AATAAA	-15	NA	43729513	43608455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_85178.known	chr7	-	1520	7	FSM	ENSG00000106603.20	ENST00000446330.6	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	426.800499843506	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCCCAGCTTTTAAT	-43714600	True	NA	NA	False	NA	NA	NA	43729513	43608818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_85184.known	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	552.461059462314	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714576	True	NA	-7	True	AATAAA	-17	NA	43729489	43639256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
transcript_85186.nic	chr7	-	983	7	ISM	ENSG00000106603.20	ENST00000438444.5	3223	8	175	8105	-19	0	5prime_fragment	FALSE	canonical	3	124	junction_5	499.458178651849	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714629	True	NA	-7	True	AATAAA	-17	NA	43729542	43639256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
transcript_85192.known	chr7	-	899	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_5	57.9330648248476	1359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714610	True	NA	-7	True	AATAAA	-17	NA	43729523	43639256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_85200.known	chr7	+	1161	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	201.749225525155	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755990	True	NA	NA	False	ATTAAA	-20	NA	43758686	43807342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_85202.known	chr7	+	1074	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	47.0075981700223	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755983	True	NA	NA	False	ATTAAA	-20	NA	43758679	43807342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_85208.known	chr7	-	3571	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	16.8095211115606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906234	True	NA	NA	False	AATAAA	-16	NA	43906596	43875912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
transcript_8521.known	chr1	+	2195	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_10	55.8440288263262	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156553	True	NA	NA	False	AATAAA	-16	NA	161159478	161165723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_85211.known	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_3	172.762521655852	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-43861066	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
transcript_85213.known	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_2	33	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-43861066	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43866983_43868962_43869075_43869307
transcript_85214.known	chr7	-	3563	5	FSM	ENSG00000106608.17	ENST00000402306.7	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	30.7408522978788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906253	True	NA	NA	False	AATAAA	-16	NA	43906615	43875912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_8522.nic	chr1	+	2579	13	NIC	ENSG00000143258.16	novel	2315	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	70	junction_1	56.1735900777422	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161159444	False	NA	NA	False	AATAAA	-16	NA	161159457	161165723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
transcript_85220.known	chr7	+	783	5	FSM	ENSG00000078967.13	ENST00000446008.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	2.34520787991171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGGTTGAAGTTGAAGA	43925810	False	NA	4	True	AATAAA	-17	NA	43926515	43949199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631
transcript_85221.nic	chr7	-	547	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-72	72667	-46	-47222	5prime_fragment	FALSE	canonical	3	79	junction_1	219.715472575076	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	44019221	44013561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_85223.known	chr7	-	324	3	FSM	ENSG00000272655.2	ENST00000418424.2	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	226	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGGCCTGGAGGGGC	-44018660	True	NA	NA	False	NA	NA	NA	44019113	44014602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44014784_44016433_44016524_44019060
transcript_85224.known	chr7	+	1299	6	FSM	ENSG00000078967.13	ENST00000440652.5	1299	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.3586491877807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGACATTTCAGCC	43925812	False	NA	24	True	AATAAA	-26	NA	43926517	43953567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43926557_43938430_43938495_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_85225.known	chr7	+	2068	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_8	132.494942251477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	44041376	True	NA	-59	True	NA	NA	NA	44044710	44061637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85227.known	chr7	+	2117	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_7	105.629955505055	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	44041382	True	NA	20	True	NA	NA	NA	44044716	44061716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85233.known	chr7	+	1241	12	FSM	ENSG00000136279.21	ENST00000456905.5	1241	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	142.698549512803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACATGGCTTCCTTA	44041338	True	NA	NA	False	NA	NA	NA	44044672	44060943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85235.known	chr7	+	1513	12	FSM	ENSG00000136279.21	ENST00000452943.5	1513	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	144.548885036479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCTGCCTGTGGCCA	44041367	True	NA	NA	False	NA	NA	NA	44044701	44061172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85237.known	chr7	+	1622	12	FSM	ENSG00000136279.21	ENST00000429716.5	1622	12	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_2	122.184997253014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACCCTTGGGAACAGT	44041373	True	NA	NA	False	NA	NA	NA	44044707	44061328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85242.known	chr7	+	1447	11	FSM	ENSG00000136279.21	ENST00000411855.5	1447	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	148.344902170584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATCTGGGAGGCTCTG	44041385	True	NA	NA	False	NA	NA	NA	44044719	44061237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85245.known	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-44065369	True	NA	-1	True	AATAAA	-17	NA	44065567	44062726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44062931_44064831_44065013_44065115
transcript_85246.known	chr7	+	1854	11	FSM	ENSG00000136279.21	ENST00000441840.7	1854	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.731603904483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTCAGGAAAAGTAACAC	44041351	True	NA	65	True	NA	NA	NA	44044685	44061609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050265_44056739_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_8525.nic	chr1	+	2449	12	NIC	ENSG00000143258.16	novel	2195	13	NA	NA	-3	0	intron_retention	TRUE	canonical	3	117	junction_1	38.0656240660414	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161159433	False	NA	NA	False	AATAAA	-16	NA	161159446	161165723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
transcript_85253.known	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.0272558436134	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	-44081250	True	NA	NA	False	NA	NA	NA	44082478	44075718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_85254.nic	chr7	+	1738	5	ISM	ENSG00000106624.11	ENST00000413907.1	2172	8	938	-1	636	0	3prime_fragment	FALSE	canonical	3	196	junction_1	23.4134042804544	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	44112113	True	NA	6	True	AATAAA	-15	NA	44112142	44114560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
transcript_85264.nnic	chr7	-	1688	11	NIC	ENSG00000106628.12	novel	2158	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_10	514.254761766967	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGCCCTGGGCACTC	-44106380	True	NA	-6	True	AATAAA	-23	NA	44123548	44114686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122196_44123510
transcript_85265.known	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_10	500.176968682086	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	-44106362	True	NA	-33	True	GGGGCT	-11	NA	44123530	44114784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
transcript_85268.known	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_10	251.695629679977	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-44106380	True	NA	1	True	AATAAA	-30	NA	44123548	44114679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_85269.known	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.91070819942883	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-44141087	False	245	2	True	AATAAA	-20	NA	44141332	44138863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
transcript_85273.known	chr7	-	1311	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	-44145899	True	NA	-4	True	ATTAAA	-19	NA	44146144	44144274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44145281_44145496_44145731_44146073
transcript_85274.known	chr7	-	1641	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTCCACTGTTCTTT	-44145884	True	NA	-2	True	ATTAAA	-21	NA	44146129	44144272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44145281_44145496
transcript_85275.known	chr7	+	1085	8	FSM	ENSG00000106636.9	ENST00000677090.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	178.822338010184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGGTCGGAGCCAGC	44189579	True	NA	71	True	NA	NA	NA	44201011	44212595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553_44211605_44212246
transcript_85277.known	chr7	+	2737	7	FSM	ENSG00000106636.9	ENST00000677436.1	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	150.04628915401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTTGAAATTTCACA	44189550	True	NA	13	True	NA	NA	NA	44200982	44214276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44201240_44204574_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_85279.known	chr7	-	8036	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_2	14.4416065588286	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGTTGCTTTTCT	-44487835	True	NA	-8	True	TATAAA	-7	NA	44490658	44379118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
transcript_85281.known	chr7	+	408	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGTGTGCACGTTTT	44467712	False	NA	NA	False	AAGAAA	-9	NA	44467896	44468304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44467900_44468300
transcript_85285.known	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_10	132.364656788978	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	-44573842	False	11171	-20	True	AATAAA	-17	NA	44573895	44565803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
transcript_85286.known	chr7	-	1855	14	FSM	ENSG00000136271.11	ENST00000258772.10	1855	14	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_9	50.9442205698297	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	-44573855	False	11171	-20	True	AATAAA	-17	NA	44573908	44565803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835
transcript_85287.nnic	chr7	-	1022	5	Fusion	ENSG00000158604.15_ENSG00000136271.11	novel	1755	4	NA	NA	0	-1936	multi-exon	FALSE	canonical	0	0	junction_1	193.001295332441	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTCCTCACCTGTAT	-44571070	True	NA	NA	False	AAAAAG	-15	NA	44582241	44574585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_44575039_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85289.nnic	chr7	-	908	5	NNC	ENSG00000158604.15	novel	1755	4	NA	NA	-16	2404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.001295332441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGTTGAGGGGACAC	-44571086	True	NA	NA	False	AAAAAG	-10	NA	44582257	44575489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_44575666_44580945_44581240_44581448_44581575_44581722_44581824_44582046
transcript_8529.nic	chr1	+	1806	13	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-43	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_3	106.394183216105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166338	False	NA	19	True	AATAAA	-16	NA	161166366	161171218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167354_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85292.known	chr7	-	2294	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.001295332441	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-44571060	True	NA	NA	False	ATTAAA	-23	NA	44582231	44577893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85296.known	chr7	-	1755	4	FSM	ENSG00000158604.15	ENST00000481238.1	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	68.7168101704379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGCCATTGCCTACCT	-44571060	True	NA	-8	True	AATAAA	-27	NA	44582231	44579896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85297.known	chr7	-	1950	3	FSM	ENSG00000158604.15	ENST00000477639.5	1950	3	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	84	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTAGTAATAGCCATTG	-44571039	True	NA	-15	True	AATAAA	-20	NA	44582210	44579903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44581240_44581448_44581575_44581722
transcript_85298.known	chr7	+	1158	1	FSM	ENSG00000287574.1	ENST00000658337.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCAGTGTGTGTCTCTA	44582450	True	NA	NA	False	ATTAAA	-36	NA	44582518	44583676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44582500_44583700
transcript_85299.known	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	36.4868367524282	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	44599240	True	NA	10	True	CATAAA	-17	NA	44606626	44709066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_8530.known	chr1	+	1667	13	FSM	ENSG00000143224.18	ENST00000652473.1	1667	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	103.777673685411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACTCTCATTCATGA	161164247	True	NA	-23	True	NA	NA	NA	161166466	161171176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85301.known	chr7	+	1744	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	40.2336923485777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	44599201	True	NA	3	True	AATAAA	-24	NA	44606587	44676594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
transcript_85306.nic	chr7	+	847	2	ISM	ENSG00000105953.16	ENST00000443864.6	1744	9	-19	51516	-3	-41773	5prime_fragment	FALSE	canonical	3	422	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGATGTAAGTCATGTC	44599182	True	NA	NA	False	NA	NA	NA	44606568	44625078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_44606654_44624316
transcript_85307.nic	chr7	+	2186	2	ISM	ENSG00000105953.16	ENST00000443864.6	1744	9	-19	50177	-3	-40434	5prime_fragment	FALSE	canonical	3	422	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTATTATGTGCCCAGGC	44599182	True	NA	14	True	AATAAA	-27	NA	44606568	44626417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_44606654_44624316
transcript_85315.known	chr7	+	2337	6	FSM	ENSG00000196262.15	ENST00000677107.1	2337	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8452.14267745168	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	44515098	True	NA	28	True	AATAAA	-19	NA	44796680	44803115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44797519_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85317.known	chr7	+	818	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	8349.59779630133	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	44515098	True	NA	3	True	AATAAA	-17	NA	44796680	44801631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85318.known	chr7	+	907	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	8361.43465201995	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	44515098	True	NA	2	True	AATAAA	-16	NA	44796680	44801630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_8532.known	chr1	+	1733	13	FSM	ENSG00000143224.18	ENST00000367999.9	1733	13	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	72.5584055931649	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	161164206	True	NA	21	True	AATAAA	-18	NA	161166425	161171220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85335.known	chr7	+	446	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	44515110	True	NA	3	True	AATAAA	-17	NA	44796692	44801631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44801286
transcript_85336.known	chr7	+	2237	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	17102	junction_2	776.443816383388	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGTATTTCTTATTCC	44515098	True	NA	30	True	AATAAA	-21	NA	44796680	44803117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85337.known	chr7	+	863	6	FSM	ENSG00000196262.15	ENST00000415933.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8744.70467425859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	44515099	True	NA	-4	True	AATAAA	-10	NA	44796681	44801624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
transcript_85338.known	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2506	junction_4	258.780191475314	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-44828461	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_85341.known	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	1390.98941604728	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	-44828450	True	NA	-8	True	GATAAA	-20	NA	44848076	44834227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
transcript_85342.known	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	1281.088686322	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	-44828395	True	NA	-8	True	GATAAA	-20	NA	44848021	44834227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
transcript_85344.known	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	1126.25761805291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-44828454	True	NA	-19	True	GATAAA	-9	NA	44848080	44834238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
transcript_85347.known	chr7	-	1041	4	FSM	ENSG00000105968.19	ENST00000446531.1	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	2506	junction_3	244.464494127243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTCCCAGCTACTCAGG	-44828457	True	NA	NA	False	AATACA	-30	NA	44848083	44834924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44835659_44840898_44841013_44843276_44843355_44847968
transcript_85349.known	chr7	-	439	3	FSM	ENSG00000105968.19	ENST00000521529.5	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	72	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGTGTTGATTGGC	-44828414	True	NA	-5	True	GATAAA	-20	NA	44848040	44834309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44840898_44841013_44847968
transcript_85354.known	chr7	-	505	5	FSM	ENSG00000232956.10	ENST00000584327.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	202.791765118804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTCTGCTTCCAGAAT	-44980648	False	NA	-117	True	NA	NA	NA	44986560	44983136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44983958_44984356_44984427_44986020_44986098_44986524
transcript_85357.known	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	34	junction_3	194.497268618354	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980757	True	NA	-6	True	AATAAA	-17	NA	44986669	44983025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
transcript_85358.known	chr7	-	982	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	4	0	0	multi-exon	FALSE	canonical	3	342	junction_3	67.2806621548867	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44986834	44983022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
transcript_85361.known	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	69.4422221866655	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-44980787	True	NA	-3	True	AATAAA	-20	NA	44986699	44983022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
transcript_85363.known	chr7	-	2344	4	FSM	ENSG00000232956.10	ENST00000653305.1	2344	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	39.0412886854702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGGTATCTCCTGAAT	-44980753	True	NA	-66	True	NA	NA	NA	44986665	44983085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44984356_44986098_44986524
transcript_85364.known	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	39	junction_2	219.077358229665	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980744	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
transcript_85366.known	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	342	junction_2	76.4475128583149	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980756	True	NA	-6	True	AATAAA	-17	NA	44986668	44983025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
transcript_85369.known	chr7	-	509	3	FSM	ENSG00000232956.10	ENST00000438705.3	509	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGTATCTCCTGAATG	-44980658	False	NA	-65	True	NA	NA	NA	44986570	44983084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44986524
transcript_8537.known	chr1	+	1686	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	96.5471603241994	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161164190	True	NA	19	True	AATAAA	-16	NA	161166409	161171218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85370.known	chr7	-	2998	3	FSM	ENSG00000232956.10	ENST00000580528.2	2998	3	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAATATGTGATTTAG	NA	False	NA	-18	True	AATAAA	-5	NA	44986961	44983037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44986098_44986524
transcript_85372.known	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	342	junction_1	85	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	-44980762	True	NA	-8	True	AATAAA	-15	NA	44986674	44983027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44984427_44986020_44986098_44986524
transcript_85373.known	chr7	-	3228	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAAATATGTGATTTA	-44980781	True	NA	-19	True	AATAAA	-4	NA	44986693	44983038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44986098_44986524
transcript_85375.known	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	105.388288524032	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-73	True	NA	NA	NA	44999474	45076352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_85376.known	chr7	+	1864	10	FSM	ENSG00000136280.17	ENST00000258781.11	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	42.9834880729052	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	44998343	True	NA	28	True	AAAAAG	-28	NA	45000200	45076453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_85386.nnic	chr7	-	925	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	27.956315128349	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	-44999410	False	NA	-3	True	AATAAA	-21	NA	45000037	44988765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
transcript_85398.known	chr7	-	2190	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	240.357150923371	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-45098353	True	NA	-4	True	NA	NA	NA	45111706	45100100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
transcript_85399.known	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_10	93.6515349580561	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098344	True	NA	-3	True	NA	NA	NA	45111697	45100099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_85400.nic	chr7	-	2255	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	139	junction_10	204.18481824073	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098394	True	NA	-3	True	NA	NA	NA	45111747	45100099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
transcript_85405.nnic	chr7	-	2248	11	NNC	ENSG00000136270.14	novel	2226	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	39	junction_3	237.315928668937	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098394	True	NA	-3	True	NA	NA	NA	45111747	45100099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101852_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_85424.known	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	258.020832492262	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098365	True	NA	-3	True	NA	NA	NA	45111718	45100099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
transcript_85425.known	chr7	-	2225	9	FSM	ENSG00000136270.14	ENST00000395655.8	2225	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	315.766502933734	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-3	True	NA	NA	NA	45112047	45100099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111663
transcript_85434.known	chr7	+	1323	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTGTTTCATGT	45157655	True	NA	4	True	AGTAAA	-19	NA	45157790	45184250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_45157887_45177308_45177442_45183156
transcript_85438.nic	chr7	-	1725	13	FSM	ENSG00000214765.9	ENST00000338231.8	1716	13	-13	4	6	0	multi-exon	FALSE	canonical	2	27	junction_1	55.4007495938056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	-45766790	True	NA	NA	False	AATAAA	-23	NA	45769031	45723787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85445.nic	chr7	-	1792	12	FSM	ENSG00000214765.9	ENST00000690171.1	1731	12	-61	0	6	0	multi-exon	FALSE	canonical	2	27	junction_2	49.9818148748304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCCTCTCTCTTTC	-45766790	True	NA	-27	True	AATAAA	-14	NA	45769031	45724049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85446.nnic	chr7	-	2032	12	FSM	ENSG00000214765.9	ENST00000686032.1	1978	12	-56	2	6	0	multi-exon	FALSE	canonical	2	9	junction_3	58.2440008615792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	-45766790	True	NA	-1	True	NA	NA	NA	45769031	45726332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45726862_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85450.nnic	chr7	-	1837	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	-17	2	6	0	multi-exon	FALSE	canonical	3	64	junction_1	31.1839702411351	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	-45766790	True	NA	-1	True	NA	NA	NA	45769031	45726332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85454.nic	chr7	-	881	6	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	6	20039	6	9340	5prime_fragment	FALSE	canonical	3	123	junction_1	20.0539272961682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTTAAAAAGATAAAGGT	-45766790	True	NA	NA	False	AATATA	-38	NA	45769031	45748643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85456.nic	chr7	-	2335	9	NIC	ENSG00000136273.13	novel	1304	9	NA	NA	-58	-63	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	26.4761095140506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGCTTAAGATTTTAT	-47976472	True	NA	-64	True	AATACA	-21	NA	47979673	47963350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_85459.known	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	36.8969884286244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	-47976352	True	NA	25	True	GATAAA	-15	NA	47979553	47965165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_85460.known	chr7	-	3007	8	FSM	ENSG00000136273.13	ENST00000258774.10	3007	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	12.0576844834338	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	-47976414	True	NA	-1	True	AAGAAA	-18	NA	47979615	47963287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_85464.known	chr7	-	548	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCATTTTAAAATT	-47976352	True	NA	45	True	TTTAAA	-43	NA	47979553	47978259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47978594_47978688_47978817_47979467
transcript_85466.known	chr7	+	1664	9	FSM	ENSG00000183696.14	ENST00000395564.9	1664	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	75.5211063213457	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGAGAGATGACTG	48086272	True	NA	NA	False	ATTAAA	-17	NA	48089264	48108736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_85467.known	chr7	+	1932	10	FSM	ENSG00000183696.14	ENST00000331803.8	1932	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.4604177553435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTGCAATGAGAGATGA	48088618	False	NA	NA	False	ATTAAA	-14	NA	48088643	48108733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48088924_48089211_48089419_48090249_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_85469.nic	chr7	+	1337	9	NIC	ENSG00000183696.14	novel	918	7	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	81.8458917722814	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089477	False	NA	9	True	ATTAAA	-15	NA	48089492	48108419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_85471.nic	chr7	+	1286	8	NIC	ENSG00000183696.14	novel	1664	9	NA	NA	-128	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_5	80.9333310919096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089073	False	NA	9	True	ATTAAA	-15	NA	48089098	48108419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101871_48106872_48107083_48107360_48107508_48108217
transcript_85478.known	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	49.366385324429	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48086272	True	NA	9	True	ATTAAA	-15	NA	48089264	48108419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_85479.known	chr7	+	782	6	FSM	ENSG00000183696.14	ENST00000417464.6	782	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	96.0104161015877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089360	False	NA	9	True	ATTAAA	-15	NA	48089375	48108419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48089419_48090249_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_85481.nic	chr7	+	945	6	NIC	ENSG00000183696.14	novel	918	7	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	76.9285382676676	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089477	False	NA	9	True	ATTAAA	-15	NA	48089492	48108419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_85486.known	chr7	-	3485	4	FSM	ENSG00000132436.12	ENST00000395556.6	3485	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.59966329107444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-50449510	True	NA	-6	True	ATTAAA	-19	NA	50450350	50444132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50447298_50448180_50448290_50449562_50449724_50450300
transcript_85487.known	chr7	-	3368	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTGCATTCTAAATTG	-50449550	True	NA	-2	True	ATTAAA	-23	NA	50450390	50444128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50447298_50448180_50448290_50450300
transcript_85488.known	chr7	-	4705	16	FSM	ENSG00000106070.20	ENST00000398812.6	4705	16	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_15	101.974375866358	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-50732341	True	NA	-11	True	AATAAA	-26	NA	50732353	50590062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271
transcript_85490.known	chr7	-	512	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	2267.13784318466	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATATCTCTTTTTT	-54739443	True	NA	26	True	ATTAAA	-13	NA	54759182	54752256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
transcript_85491.known	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	3127	junction_3	868.454949896654	3729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-54739472	True	NA	30	True	ATTAAA	-17	NA	54759211	54752252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
transcript_85495.known	chr7	+	4459	9	FSM	ENSG00000132434.10	ENST00000254770.3	4459	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	11.7340317027013	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCGTCATTCGTTTTC	55365278	True	NA	9	True	AGTAAA	-25	NA	55365336	55433737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55366230_55391792_55391911_55398422_55398631_55399956_55400105_55401173_55401321_55411906_55412090_55425253_55425431_55428374_55428448_55431225
transcript_85496.known	chr7	-	2939	5	FSM	ENSG00000154978.13	ENST00000285279.10	2939	5	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	38.1215162342738	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGATTGTTTTGTT	-55568092	True	NA	-9	True	AATAAA	-15	NA	55572502	55470612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_55473046_55492281_55492419_55497612_55497691_55521071_55521131_55572270
transcript_85500.known	chr7	+	1993	10	FSM	ENSG00000146729.10	ENST00000322090.8	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_6	50.1907472659166	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACGTTTGGATTTTCTT	55960833	True	NA	18	True	AATAAA	-19	NA	55964584	56000179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55964702_55978125_55978266_55978349_55978396_55981472_55981568_55982209_55982281_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
transcript_85505.known	chr7	+	1786	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	182	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	55936988	True	NA	14	True	AATAAA	-15	NA	55951876	55956500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55951931_55953178_55953319_55954908
transcript_85507.nnic	chr7	+	504	3	NNC	ENSG00000239789.6	novel	1786	3	NA	NA	39	67	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_1	327.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTAAGTTTCATCAC	55937027	True	NA	-4	True	AAAAAG	-3	NA	55951915	55955239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_55951949_55953178_55953319_55954908
transcript_85508.nnic	chr7	+	606	3	NNC	ENSG00000239789.6	novel	1786	3	NA	NA	39	169	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_1	327.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATGGTCGTGTTTCAA	55937027	True	NA	10	True	AGTAAA	-25	NA	55951915	55955341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_55951949_55953178_55953319_55954908
transcript_85509.known	chr7	+	718	3	FSM	ENSG00000239789.6	ENST00000443449.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	55937074	False	NA	-71	True	NA	NA	NA	55951962	55955172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55952277_55953178_55953319_55954908
transcript_8552.nic	chr1	+	1541	11	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	104.699617955368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166338	False	NA	19	True	AATAAA	-16	NA	161166366	161171218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85520.nnic	chr7	-	1475	8	NNC	ENSG00000146733.14	novel	2178	8	NA	NA	-81	688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.66190465038	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTATATAAACCATTTC	NA	False	NA	48	True	ATTAAA	-17	NA	56034253	56010362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_56010513_56011552_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_85528.known	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	96.8459749145149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-56049656	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
transcript_85529.known	chr7	-	2178	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	73.9495139419111	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	NA	False	NA	-24	True	AATAAA	-17	NA	56051604	56011067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
transcript_85535.nic	chr7	-	1810	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17191	4	-81	0	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	NA	False	NA	-24	True	AATAAA	-17	NA	56034253	56011067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_85539.nic	chr7	-	1219	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17191	595	-81	-121	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTACAAATGATCTGTA	NA	False	NA	-6	True	NA	NA	NA	56034253	56011658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_85550.known	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2441	junction_3	270.128875663924	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017721	True	NA	28	True	AATAAA	-18	NA	56051764	56063989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_85564.known	chr7	+	2529	13	FSM	ENSG00000146731.11	ENST00000335503.3	2529	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	819.191861260569	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017641	True	NA	28	True	AATAAA	-18	NA	56051684	56063989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56051986_56052421_56052486_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_85580.known	chr7	+	1990	9	FSM	ENSG00000129103.19	ENST00000434526.8	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_5	35.5940655165998	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	56056278	True	NA	29	True	AATAAA	-24	NA	56064285	56080670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_85583.known	chr7	+	1876	8	FSM	ENSG00000129103.19	ENST00000342190.11	1876	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	163.345383423329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	56056247	True	NA	29	True	AATAAA	-24	NA	56064254	56080670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56079527
transcript_85584.known	chr7	+	1792	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	153.064745537732	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	56056293	True	NA	-3	True	NA	NA	NA	56064300	56080638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_85585.known	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	148.268096944112	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056216	True	NA	28	True	AATAAA	-23	NA	56064223	56080669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_85586.known	chr7	+	913	8	FSM	ENSG00000129103.19	ENST00000452216.5	913	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	165.079819901693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCCCATCCCTCTG	56056257	True	NA	NA	False	NA	NA	NA	56064264	56079729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_85590.known	chr7	+	1287	6	FSM	ENSG00000129103.19	ENST00000395435.7	1287	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	186.685189557179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCATTGCATTGTGGG	56056246	True	NA	NA	False	NA	NA	NA	56064253	56080187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56078101_56078187_56078363_56078509_56079527
transcript_85592.known	chr7	+	1195	3	FSM	ENSG00000129103.19	ENST00000483327.5	1195	3	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTGATGGTGCCAC	56056293	True	NA	NA	False	NA	NA	NA	56064300	56073956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996
transcript_85594.known	chr7	-	797	4	FSM	ENSG00000106153.13	ENST00000395422.4	797	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTTCATTTAGTCTA	NA	False	NA	-14	True	AATAAA	-16	NA	56106476	56101572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_56101862_56102866_56103012_56104225_56104476_56106363
transcript_85596.nnic	chr7	-	3137	5	NNC	ENSG00000173041.12	novel	2993	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	26.2904450323687	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	-64561029	True	NA	-1	True	ATTAAA	-20	NA	64563097	64519877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_64522501_64535818_64535937_64543706_64543803_64544305_64544433_64562924
transcript_85597.known	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	-64561003	True	NA	-1	True	ATTAAA	-20	NA	64563071	64519877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
transcript_85598.known	chr7	-	2159	4	FSM	ENSG00000173041.12	ENST00000447137.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.2807651352991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTCTGTTATTAAT	-64560973	True	NA	NA	False	NA	NA	NA	64563041	64524698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64526518_64543706_64543803_64544305_64544433_64562924
transcript_8560.nnic	chr1	+	1396	10	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	108.856684580129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166338	False	NA	19	True	AATAAA	-16	NA	161166366	161171218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85600.known	chr7	-	769	3	FSM	ENSG00000173041.12	ENST00000476563.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	25.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTCAATCCTTAGTAA	-64560954	True	NA	NA	False	NA	NA	NA	64563022	64521925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64522501_64543706_64543803_64562924
transcript_85603.nnic	chr7	+	1860	4	NNC	ENSG00000286456.2	novel	636	3	NA	NA	-5	-7	intron_retention	FALSE	canonical	2	3	junction_3	35.1220095603249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACCAAGGCTATGTG	64572342	True	NA	11	True	AATAAA	-22	NA	64574667	64614827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_64574849_64599658_64599783_64612425_64612573_64613419
transcript_85604.nnic	chr7	+	634	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	-5	7	-5	-7	multi-exon	FALSE	canonical	3	14	junction_2	32	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACCAAGGCTATGTG	64572342	True	NA	11	True	AATAAA	-22	NA	64574667	64614827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64574849_64599658_64599783_64614498
transcript_85606.known	chr7	+	5664	4	FSM	ENSG00000196247.13	ENST00000620827.6	5630	4	-29	-5	5	5	multi-exon	FALSE	canonical	3	60	junction_1	5.55777733351102	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTCTTTGAACATG	64662224	True	NA	NA	False	AATAAA	-17	NA	64666103	64711582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64666286_64691247_64691375_64691864_64691961_64706323
transcript_85614.nnic	chr7	+	799	5	NNC	ENSG00000197008.10	novel	842	5	NA	NA	-4	-51	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_3	27.2304976083802	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGACAAATCACTTTG	64790056	True	NA	4	True	AATAAA	-16	NA	64794383	64831752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_64794572_64814917_64815045_64815575_64815654_64820219_64820324_64831450
transcript_85615.known	chr7	+	842	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	24.8130510014387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTAGAGAGAATTT	64790097	True	NA	55	True	CATAAA	-4	NA	64794424	64831803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
transcript_85618.known	chr7	+	2230	4	FSM	ENSG00000197008.10	ENST00000440598.2	2230	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	20.0665559243899	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAATGTGAAAATGAT	64790100	True	NA	NA	False	ACTAAA	-29	NA	64794427	64833327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64815571_64815654_64831450
transcript_85620.known	chr7	+	2579	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	20.9920619917784	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	64790100	True	NA	19	True	AATAAA	-33	NA	64794427	64833680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
transcript_85623.known	chr7	+	2679	4	FSM	ENSG00000197008.10	ENST00000359735.7	2679	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	29.1699998095456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGGTTTTGTTTTAGTG	64790060	True	NA	20	True	AATAAA	-34	NA	64794387	64833681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64830939_64831077_64831450
transcript_85626.known	chr7	+	1066	3	FSM	ENSG00000197008.10	ENST00000440155.6	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACAAATGTGAAGAATGT	64790097	True	NA	NA	False	AAGAAA	-20	NA	64794424	64832242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64831450
transcript_85631.known	chr7	+	2308	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	64790162	True	NA	15	True	AATAAA	-29	NA	64794489	64833676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64831450
transcript_85634.known	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	20.9821352583573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	64900531	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
transcript_85636.nic	chr7	+	1231	4	NIC	ENSG00000198039.12	novel	3698	4	NA	NA	-8	-213	combination_of_known_junctions	TRUE	canonical	3	16	junction_3	31.689465477067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAGACTCTTTTGAC	64900488	True	NA	NA	False	CATAAA	-18	NA	64903244	64924218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
transcript_85637.known	chr7	+	2000	4	FSM	ENSG00000198039.12	ENST00000476120.2	3698	4	-26	1724	-6	133	multi-exon	FALSE	canonical	3	46	junction_1	19.2006944318862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	64900490	True	NA	NA	False	AATAAA	-17	NA	64903246	64929257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64903420_64917580_64917708_64918196_64918293_64927653
transcript_85639.known	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	7	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	64947812	False	NA	-78	True	NA	NA	NA	64947837	64950641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64947858_64949115_64949410_64950203
transcript_85640.known	chr7	-	1729	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	-65004058	True	NA	NA	False	AATAAA	-34	NA	65006743	65003668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_65005195_65006540
transcript_85641.known	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	-65003974	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_65006323_65006540
transcript_85642.known	chr7	-	1837	3	FSM	ENSG00000152926.16	ENST00000487644.1	1837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	11	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGGGTGTGTTATT	-65003999	True	NA	NA	False	AATAAA	-10	NA	65006684	64979922	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64981483_64981983_64982117_65006540
transcript_85644.known	chr7	+	2238	11	FSM	ENSG00000234585.6	ENST00000426828.5	2238	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	14.3069912979634	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65037985	True	NA	NA	False	AATAAA	-18	NA	65038359	65074713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65068791_65069660_65069758_65070345_65070485_65070908_65071043_65073440_65073515_65073777
transcript_85646.known	chr7	+	3165	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6144555520604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTATTCGATGAAG	65369069	True	NA	8	True	ATTAAA	-21	NA	65373854	65401136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
transcript_85648.known	chr7	+	2957	3	FSM	ENSG00000146757.14	ENST00000450302.2	2957	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	46	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	65369095	True	NA	18	True	AATAAA	-19	NA	65373880	65401081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65374001_65388805_65388902_65398340
transcript_85649.known	chr7	+	2947	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTAAGACTAGTGT	65369053	True	NA	-3	True	ATTAAA	-10	NA	65373838	65401125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65374001_65398340
transcript_85656.known	chr7	+	1317	11	FSM	ENSG00000228409.7	ENST00000688478.1	2258	11	73	868	0	18	multi-exon	FALSE	canonical	3	9	junction_2	29.6033781856058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	65749948	True	NA	NA	False	NA	NA	NA	65751141	65763354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_85658.nic	chr7	+	1701	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	-4	552	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	19.1874959283383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAATGGTTTAATTTT	65749839	True	NA	NA	False	ATTAAA	-18	NA	65751032	65763673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_85659.nic	chr7	+	2250	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	-4	3	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	19.1874959283383	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65749839	True	NA	NA	False	AATAAA	-18	NA	65751032	65764222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_85662.known	chr7	+	1170	10	FSM	ENSG00000228409.7	ENST00000688735.1	2135	10	94	871	0	18	multi-exon	FALSE	canonical	3	44	junction_1	19.2341003762575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	65749948	True	NA	NA	False	NA	NA	NA	65751141	65763354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_85667.known	chr7	+	5895	3	FSM	ENSG00000196715.7	ENST00000648179.1	5895	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	22	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTTTCATGGAGCT	65870444	True	NA	20	True	AATAAA	-20	NA	65873269	65959562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65873566_65948670_65948781_65954073
transcript_85671.known	chr7	-	2199	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	81.824444204782	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	-65977891	True	NA	-7	True	AATAAA	-29	NA	65982213	65960683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_85676.nic	chr7	-	2064	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_6	53.2413373235496	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	NA	False	NA	-21	True	AATAAA	-38	NA	65982245	65960697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_8569.nic	chr1	+	1205	9	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	111.626329779313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166338	False	NA	19	True	AATAAA	-16	NA	161166366	161171218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_85710.nnic	chr7	-	1653	8	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	108.363711073177	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	NA	False	NA	-21	True	AATAAA	-38	NA	65982245	65960697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_85719.known	chr7	+	2140	17	FSM	ENSG00000126522.17	ENST00000304874.14	2140	17	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_14	41.3655578349912	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAACTAGCCAAACTG	66073646	True	NA	NA	False	ATTAAA	-24	NA	66075818	66093576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_85722.nic	chr7	+	1458	16	NIC	ENSG00000126522.17	novel	2140	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11	junction_12	56.869284816635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTTTCCTGC	66073646	True	NA	8	True	AATAAA	-16	NA	66075818	66092954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_85728.known	chr7	+	1436	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_7	55.1505414499461	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	66073649	True	NA	7	True	AATAAA	-15	NA	66075821	66092953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_85730.nic	chr7	+	1323	16	NIC	ENSG00000126522.17	novel	2140	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	19	junction_2	55.6151857759092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTTTCCTGC	66073646	True	NA	8	True	AATAAA	-16	NA	66075818	66092954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_66075857_66076038_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_85742.known	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_1	55.8715728529386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	66073764	True	NA	9	True	AATAAA	-17	NA	66075936	66092955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_85745.nnic	chr7	+	1806	7	NNC	ENSG00000241258.7	novel	3139	7	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.2300526268883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAATGTGTGATTTTTT	66111553	True	NA	10	True	AATAAA	-17	NA	66114822	66154561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207_66153316_66154300
transcript_85749.known	chr7	+	2774	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	6.82934843158555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	66111577	True	NA	17	True	AATAAA	-24	NA	66114846	66154568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
transcript_8575.nic	chr1	-	2148	9	NIC	ENSG00000158850.15	novel	1933	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	150.600827935971	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-161174431	True	NA	-18	True	AATAAA	-16	NA	161177527	161171309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161176911_161177107_161177422
transcript_85754.known	chr7	+	492	3	FSM	ENSG00000241258.7	ENST00000398684.6	492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTTGGGGAGA	66111571	True	NA	NA	False	AAAAAG	-3	NA	66114840	66152511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66114971_66145442_66145501_66152207
transcript_85756.known	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_13	39.3511823908197	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	66073716	True	NA	-14	True	NA	NA	NA	66075888	66092932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_85757.known	chr7	+	454	2	FSM	ENSG00000237310.3	ENST00000452565.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTCTGGTTTTTGGGG	66493294	True	NA	12	True	ATTAAA	-23	NA	66493785	66495472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66494022_66495254
transcript_85758.known	chr7	+	713	2	FSM	ENSG00000237310.3	ENST00000669130.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	66493224	True	NA	10	True	ATTAAA	-21	NA	66493715	66495470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66494213_66495254
transcript_85762.known	chr7	-	2103	6	FSM	ENSG00000229180.8	ENST00000638711.1	2103	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.9837458719269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	-66590250	True	NA	81	True	NA	NA	NA	66592397	66553484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66554838_66573384_66573551_66576754_66576930_66578528_66578728_66588511_66588581_66592256
transcript_85766.nic	chr7	-	1858	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-41	23045	-7	-84	5prime_fragment	FALSE	canonical	3	33	junction_4	13.9171656597168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590257	True	NA	-3	True	TATAAA	-22	NA	66592404	66553568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_85769.nic	chr7	-	1661	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-41	23242	-7	-281	5prime_fragment	FALSE	canonical	3	33	junction_4	13.9171656597168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	-66590257	True	NA	-11	True	AATAAA	-17	NA	66592404	66553765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_85773.nic	chr7	-	1681	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-72	23262	-8	-84	5prime_fragment	FALSE	canonical	3	67	junction_1	17.4419672692682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590258	True	NA	-3	True	TATAAA	-22	NA	66592405	66553568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_85774.nic	chr7	-	1761	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-61	8718	-7	-84	5prime_fragment	FALSE	canonical	3	33	junction_3	22.905603390146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590257	True	NA	-3	True	TATAAA	-22	NA	66592404	66553568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_85776.nic	chr7	-	1484	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-72	23459	-8	-281	5prime_fragment	FALSE	canonical	3	67	junction_1	17.4419672692682	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	-66590258	True	NA	-11	True	AATAAA	-17	NA	66592405	66553765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_85778.nic	chr7	-	1564	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-61	8915	-7	-281	5prime_fragment	FALSE	canonical	3	33	junction_3	22.905603390146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	-66590257	True	NA	-11	True	AATAAA	-17	NA	66592404	66553765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_85781.nic	chr7	-	1844	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-8	7886	-8	176	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTTTTTTTGGAGACG	-66590258	True	NA	NA	False	ATTAAA	-41	NA	66592405	66553308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_85782.nic	chr7	-	1584	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-8	8146	-8	-84	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590258	True	NA	-3	True	TATAAA	-22	NA	66592405	66553568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_85783.nic	chr7	-	1387	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-8	8343	-8	-281	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	-66590258	True	NA	-11	True	AATAAA	-17	NA	66592405	66553765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_85785.known	chr7	-	563	3	FSM	ENSG00000229180.8	ENST00000639153.2	635	3	0	72	0	-72	multi-exon	FALSE	canonical	3	20	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTGTATTCTTCTAGT	-66590239	True	NA	-11	True	TATAAA	-15	NA	66592386	66584102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66584467_66588511_66588581_66592256
transcript_85786.nnic	chr7	-	582	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-1	4	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGCAATGTGTGTGT	-66590251	True	NA	65	True	AATATA	-21	NA	66592398	66584026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_66584467_66592256
transcript_85787.nnic	chr7	-	492	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-1	-86	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTACAGAGAAGTCCTG	-66590251	True	NA	-25	True	TATAAA	-1	NA	66592398	66584116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_66584467_66592256
transcript_85788.known	chr7	-	395	1	FSM	ENSG00000275400.1	ENST00000622243.1	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAATGTTAACATAAT	-66554188	False	NA	-50	True	NA	NA	NA	66554199	66553804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66553800_66554200
transcript_85789.known	chr7	+	625	5	FSM	ENSG00000226824.8	ENST00000656515.2	929	5	46	258	-11	44	multi-exon	FALSE	canonical	1	1	junction_2	1.87082869338697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACAGCCCCCAGAGGC	66652607	True	NA	NA	False	NA	NA	NA	66654566	66669342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66654627_66666113_66666203_66667397_66667611_66668763_66668914_66669229
transcript_85790.known	chr7	+	1172	5	FSM	ENSG00000226824.8	ENST00000657342.1	1172	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.58113883008419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTATTGAATGAGATGA	66652618	True	NA	NA	False	AATAAA	-2	NA	66654577	66670413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66654627_66666113_66666203_66667397_66667611_66668763_66668914_66669742
transcript_85792.known	chr7	+	304	3	FSM	ENSG00000226824.8	ENST00000428557.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGGGCCACCACCAAGA	66652626	True	NA	NA	False	AAAACA	-38	NA	66654585	66669855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66654627_66668763_66668914_66669742
transcript_85793.known	chr7	+	2281	10	FSM	ENSG00000154710.18	ENST00000450873.6	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	58.6060292688958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAGCACCATTTTATT	66737428	True	NA	3	True	AATGAA	-16	NA	66740732	66809817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66740793_66768830_66769026_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_85794.known	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	20.6514981296757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	66737428	True	NA	20	True	AATAAA	-29	NA	66740732	66811464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_85801.known	chr7	+	3330	16	FSM	ENSG00000198874.14	ENST00000359626.10	3330	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	13.5095028282564	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	66994980	True	NA	8	True	AATAAA	-18	NA	66996832	67239514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_85803.nic	chr7	+	1127	7	ISM	ENSG00000198874.14	ENST00000359626.10	3330	16	-3	214498	-3	7135	5prime_fragment	FALSE	canonical	3	115	junction_2	11.3137084989848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGTACCGTTACTTTG	66994977	True	NA	NA	False	AAGAAA	-1	NA	66996829	67025016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899
transcript_85807.known	chr7	-	1613	5	FSM	ENSG00000126524.11	ENST00000246868.7	1613	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	27.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCCTAACTCCCTTTC	-66991219	True	NA	88	True	AATAAA	-42	NA	66995586	66987679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
transcript_85810.known	chr7	-	1531	5	FSM	ENSG00000126524.11	ENST00000414306.5	1531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.776938929297	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGTATGTAATCAAT	-66991209	True	NA	24	True	AATATA	-13	NA	66995576	66987743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994219_66994342_66995289
transcript_85811.nnic	chr7	-	1680	7	NNC	ENSG00000067601.9	novel	1451	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.82546819658248	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGGAGAGAATATTCTA	-67301905	True	NA	NA	False	AATAAA	-23	NA	67302428	67273471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_67273661_67275309_67276250_67292462_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_85813.nic	chr7	-	1058	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	-430	4	-419	0	multi-exon	FALSE	canonical	3	15	junction_4	3.41869858279434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	-67302856	True	NA	NA	False	ATTAAA	-18	NA	67302904	67292431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_85814.known	chr7	-	721	6	FSM	ENSG00000067601.9	ENST00000688434.1	933	6	57	155	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	7.91454357496375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	-67301896	True	NA	NA	False	AATAAA	-18	NA	67302419	67287540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_67287720_67292462_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_85815.nic	chr7	+	1081	6	ISM	ENSG00000106610.16	ENST00000647855.1	1413	10	-22	42546	16	0	5prime_fragment	FALSE	canonical	2	6	junction_3	65.9605942968982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGCTCTAAGT	67301040	True	NA	20	True	ATTAAA	-43	NA	67302636	67320404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_67302886_67305986_67306084_67308576_67308653_67308934_67309140_67309563_67309716_67320102
transcript_85822.known	chr7	+	2143	5	FSM	ENSG00000106610.16	ENST00000416602.6	2143	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	13.4420050587701	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAAACTTATCTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	67302620	67321526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_67302886_67305986_67306084_67308934_67309140_67309563_67309716_67320102
transcript_85823.nnic	chr7	+	800	4	FSM	ENSG00000106610.16	ENST00000691248.1	783	4	-17	0	16	0	multi-exon	FALSE	canonical	3	10	junction_2	67.2755527662166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGCTCTAAGT	67301040	True	NA	20	True	ATTAAA	-43	NA	67302636	67320404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_67302886_67305986_67306084_67309563_67309716_67320102
transcript_85824.nnic	chr7	+	892	4	FSM	ENSG00000106610.16	ENST00000687534.1	890	4	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	63.7826169282997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGCTCTAAGT	67301056	True	NA	20	True	ATTAAA	-43	NA	67302652	67320404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_67302886_67308934_67309140_67309563_67309716_67320102
transcript_85829.known	chr7	-	8571	2	FSM	ENSG00000183166.11	ENST00000405452.3	8571	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGATTCCATTCATTA	NA	False	NA	NA	False	AATAAA	-18	NA	71810495	71779491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_71787903_71810335
transcript_85831.known	chr7	-	3117	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	13.6862562254057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-72827518	True	NA	-5	True	AATAAA	-18	NA	72828200	72574512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_85832.nnic	chr7	-	2053	7	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92087	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	18.2999696417477	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-72735936	True	NA	-5	True	AATAAA	-18	NA	72736087	72574512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72735944
transcript_85835.known	chr7	+	737	5	FSM	ENSG00000225648.6	ENST00000453858.2	1621	5	189	695	149	63	multi-exon	FALSE	canonical	3	50	junction_1	52.9734603362854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCATCAGTCTCTTC	72829638	False	NA	NA	False	NA	NA	NA	72829655	72836701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_85836.nnic	chr7	+	1641	5	NNC	ENSG00000225648.6	novel	1621	5	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.0895549992802	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72829322	False	NA	NA	False	AATAAA	-22	NA	72829367	72837376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_72829784_72830750_72830814_72831601_72831799_72833763_72833929_72836576
transcript_85838.known	chr7	+	963	5	FSM	ENSG00000225648.6	ENST00000456312.5	963	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	67.3994621640262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGATTGACCTGGGCTG	72827850	True	NA	NA	False	NA	NA	NA	72829500	72836579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829977_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_85840.known	chr7	+	839	4	FSM	ENSG00000225648.6	ENST00000437201.5	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	60.6648351371882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTAAACAGTCAGAT	72827856	True	NA	NA	False	AATAAA	-18	NA	72829506	72834006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763
transcript_85843.nnic	chr7	+	800	4	NNC	ENSG00000225648.6	novel	839	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	77.0122645355199	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTAAACAGTCAGAT	72827836	True	NA	NA	False	AATAAA	-18	NA	72829486	72834006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_72829784_72830750_72830814_72831601_72831799_72833763
transcript_85845.nic	chr7	+	1562	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-76	3	-41	0	multi-exon	FALSE	canonical	3	81	junction_1	44.6542271235322	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72829348	True	NA	NA	False	AATAAA	-22	NA	72829383	72837376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
transcript_85847.nnic	chr7	+	1668	4	NIC	ENSG00000225648.6	novel	963	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	77.2111103116356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72827820	True	NA	NA	False	AATAAA	-22	NA	72829470	72837376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_72829977_72831601_72831799_72833763_72833929_72836576
transcript_85848.known	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	54	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	72827839	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72831601_72831799_72833763
transcript_85849.known	chr7	+	618	3	FSM	ENSG00000225648.6	ENST00000423945.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGTTCTTTGGAAG	72829389	False	NA	NA	False	AATAAA	-13	NA	72829424	72836638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72831601_72831799_72836576
transcript_85852.known	chr7	-	1647	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	186.270264857942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953849	True	NA	-6	True	AATAAA	-18	NA	72954720	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_85854.nnic	chr7	-	2441	11	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-33	0	intron_retention	FALSE	canonical	3	64	junction_4	174.901943957178	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953882	True	NA	-6	True	AATAAA	-18	NA	72954753	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_8586.known	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	144.567052446473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174401	True	NA	-20	True	AATAAA	-14	NA	161177497	161171311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
transcript_85880.known	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	201.64875953554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	-72953842	True	NA	-1	True	AATAAA	-23	NA	72954713	72948292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85882.nic	chr7	-	1223	7	NIC	ENSG00000106133.18	novel	1647	12	NA	NA	27	0	intron_retention	FALSE	canonical	3	18	junction_2	214.547909697474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85883.nnic	chr7	-	1303	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	27	0	intron_retention	FALSE	canonical	3	64	junction_3	197.473767596835	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85884.nnic	chr7	-	1508	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-24	0	intron_retention	FALSE	canonical	3	24	junction_6	212.043758586655	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953873	True	NA	-6	True	AATAAA	-18	NA	72954744	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72954624
transcript_85885.nnic	chr7	-	1494	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-33	0	intron_retention	FALSE	canonical	3	36	junction_5	196.247009885218	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953882	True	NA	-6	True	AATAAA	-18	NA	72954753	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
transcript_85888.nnic	chr7	-	1406	7	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	-33	0	intron_retention	FALSE	canonical	3	36	junction_5	206.116269776713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953882	True	NA	-6	True	AATAAA	-18	NA	72954753	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
transcript_85889.nnic	chr7	-	1383	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	27	0	intron_retention	FALSE	canonical	3	154	junction_2	183.55119176949	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85890.nnic	chr7	-	1303	6	NNC	ENSG00000106133.18	novel	1789	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	47	junction_2	208.978467790344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72949103_72949304_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85891.nic	chr7	-	1295	6	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	95	junction_2	196.828453227677	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85892.nnic	chr7	-	1616	6	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	-33	0	intron_retention	FALSE	canonical	3	36	junction_4	196.642213168994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953882	True	NA	-6	True	AATAAA	-18	NA	72954753	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
transcript_85895.known	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	236.915069170367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	-72953835	True	NA	NA	False	AATAAA	-25	NA	72954706	72947580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
transcript_85896.nic	chr7	-	1505	5	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	161	junction_4	175.456547327251	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954624
transcript_85900.nic	chr7	-	451	2	ISM	ENSG00000106133.18	ENST00000457352.4	1385	10	-36	5673	-33	-5673	5prime_fragment	FALSE	canonical	3	391	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAGCGGAGACAGT	-72953882	True	NA	NA	False	ATTAAA	-16	NA	72954753	72954157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_72954480_72954624
transcript_85901.known	chr7	-	708	1	FSM	ENSG00000272843.1	ENST00000608799.1	708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTCTGCCAATACACT	-72925115	False	NA	NA	False	AATAAA	-16	NA	72925125	72924417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72924400_72925100
transcript_85904.nnic	chr7	-	1467	10	NNC	ENSG00000174353.17	novel	1067	8	NA	NA	-11	3764	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1901411245857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCTCCACCTGTCTTC	-73001023	True	NA	NA	False	AATAAA	-17	NA	73005933	72993294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72993440_72998012_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_85914.known	chr7	-	2137	8	FSM	ENSG00000174353.17	ENST00000428423.5	2137	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	17.7981883966903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAATTAGGCCGGGCG	-73001008	True	NA	NA	False	NA	NA	NA	73005918	72997058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_85917.known	chr7	-	1262	8	FSM	ENSG00000174353.17	ENST00000423834.6	1262	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	21.3570234110372	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001012	True	NA	NA	False	NA	NA	NA	73005922	72998489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005575
transcript_85918.nic	chr7	-	1156	8	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	13.1226552813313	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001023	True	NA	NA	False	NA	NA	NA	73005933	72998489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_85921.known	chr7	+	1336	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	8.52447456836295	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	73005514	True	NA	NA	False	NA	NA	NA	73005540	73021103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
transcript_85925.nic	chr7	-	1032	7	ISM	ENSG00000174353.17	ENST00000428423.5	2137	8	-15	1431	-11	0	5prime_fragment	FALSE	canonical	3	56	junction_4	8.83962040411741	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001023	True	NA	NA	False	NA	NA	NA	73005933	72998489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_85926.nic	chr7	-	1420	7	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	40	junction_4	14.0998423947062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001023	True	NA	NA	False	NA	NA	NA	73005933	72998489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_85927.known	chr7	-	897	7	FSM	ENSG00000174353.17	ENST00000569650.1	897	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	26.6499947884089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACAGATGGAG	-73000875	False	NA	NA	False	NA	NA	NA	73005785	72998492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72998791_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_85930.known	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	15.3674981698388	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-73001005	True	NA	NA	False	NA	NA	NA	73005915	72998483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_85938.nic	chr7	-	1690	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	19	0	intron_retention	FALSE	canonical	2	8	junction_4	26.3818119165458	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-73000986	True	NA	NA	False	NA	NA	NA	73005896	72998483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005575
transcript_85939.nic	chr7	-	1610	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	56	junction_2	9.73396116696589	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-73001023	True	NA	NA	False	NA	NA	NA	73005933	72998483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_85944.nic	chr7	-	1815	4	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-11	1	intron_retention	FALSE	canonical	3	56	junction_1	10.6249183003395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACAGATGGAGAAGG	-73001023	True	NA	NA	False	NA	NA	NA	73005933	72998488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999860_73003020_73003138_73003644_73003731_73005692
transcript_85945.known	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_21	490.628241985364	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	73152585	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
transcript_85947.nnic	chr7	-	1596	11	NNC	ENSG00000130305.17	novel	2336	10	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	167.233848248493	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-73304446	True	NA	-7	True	AATAAA	-22	NA	73308867	73303224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_73303530_73303599_73303741_73303825_73303915_73303986_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_85953.known	chr7	-	1602	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	166.376413926707	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTACGATAGATCACAGT	-73304395	True	NA	-17	True	AATAAA	-12	NA	73308816	73303234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_85957.known	chr7	-	2286	9	FSM	ENSG00000130305.17	ENST00000471461.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	185.172174948074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-73304395	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304405_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73308554_73308697
transcript_8596.known	chr1	+	813	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	141.802679805425	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	161164250	True	NA	21	True	AATAAA	-18	NA	161166469	161171220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
transcript_85960.known	chr7	-	2269	9	FSM	ENSG00000130305.17	ENST00000428206.5	2269	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	194.094532380487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTTTCTTTTAAT	-73304383	True	NA	NA	False	AATAAA	-20	NA	73308804	73302516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307644_73308430_73308554_73308697
transcript_85961.known	chr7	-	1672	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_7	63.2351761284809	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-73304385	True	NA	-12	True	AATAAA	-17	NA	73308806	73303229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_85966.known	chr7	-	1638	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	114.688098772279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	-73557133	False	NA	-42	True	NA	NA	NA	73557251	73536387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
transcript_85967.known	chr7	-	1663	6	FSM	ENSG00000106635.8	ENST00000223368.7	1663	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	48.9873453046805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-73554875	True	NA	-10	True	ATTAAA	-15	NA	73557690	73536355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557486
transcript_85968.known	chr7	-	653	5	FSM	ENSG00000106635.8	ENST00000464288.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	154.206638962141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTTATTGCATTCTGG	-73557123	False	NA	NA	False	NA	NA	NA	73557241	73537265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557040
transcript_85969.known	chr7	-	714	5	FSM	ENSG00000106635.8	ENST00000463858.5	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	148.150894361121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAAGAGGAGCGCTCATG	-73557093	False	NA	NA	False	GGGGCT	-45	NA	73557211	73537100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73543547_73543645_73552166_73552243_73557040
transcript_85972.known	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_5	17.7263144004111	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	-73576212	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_85975.known	chr7	-	2209	7	FSM	ENSG00000106638.18	ENST00000450285.5	2209	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	64.0149722070288	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	-73576223	True	NA	-7	True	AATAAA	-28	NA	73578590	73569659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573960_73574123_73574382_73574514_73578419
transcript_85981.known	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	355.89725226063	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	73667844	True	NA	0	True	AATAAA	-12	NA	73683625	73698208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
transcript_85987.known	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_10	59.1651282149732	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	73667815	True	NA	4	True	AATAAA	-16	NA	73683596	73698212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_85995.nic	chr7	+	1366	12	NIC	ENSG00000071462.12	novel	1201	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	278.415647418159	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	NA	False	NA	4	True	AATAAA	-16	NA	73683528	73698212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_73683674_73683766_73683902_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_86000.known	chr7	+	1260	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	283.48393339988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	73667844	True	NA	NA	False	NA	NA	NA	73683625	73698104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_86004.known	chr7	+	1815	11	FSM	ENSG00000071462.12	ENST00000463307.5	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_9	60.2979269958761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGAGCATCTTATTT	73667827	True	NA	-52	True	AATGAA	-38	NA	73683608	73698156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_86035.known	chr7	-	1418	6	FSM	ENSG00000106077.19	ENST00000222800.8	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	21.5276566304835	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735752	True	NA	-7	True	AATAAA	-16	NA	73738802	73736093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738464_73738645
transcript_86039.known	chr7	-	1447	6	FSM	ENSG00000106077.19	ENST00000437775.7	1447	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.8762919313728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735802	True	NA	-7	True	AATAAA	-16	NA	73738852	73736093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738443_73738645
transcript_86042.known	chr7	-	1277	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	50.9362346468602	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735782	True	NA	-7	True	AATAAA	-16	NA	73738832	73736093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
transcript_86049.known	chr7	-	890	4	FSM	ENSG00000106077.19	ENST00000458339.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	65.2703778311588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAGGCAACAGAGCA	-73735773	True	NA	NA	False	NA	NA	NA	73738823	73736289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73737561_73737736_73738327_73738464_73738645
transcript_8605.known	chr1	-	1933	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_6	61.881057732738	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-161174411	True	NA	-18	True	AATAAA	-16	NA	161177507	161171309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_86051.nic	chr7	-	2008	3	NIC	ENSG00000106077.19	novel	1277	5	NA	NA	-23	0	intron_retention	FALSE	canonical	3	144	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735825	True	NA	-7	True	AATAAA	-16	NA	73738875	73736093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_73737736_73738327_73738464_73738645
transcript_86052.known	chr7	+	662	4	FSM	ENSG00000225969.2	ENST00000427153.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGCCTGTCTGAGTC	NA	False	NA	NA	False	ATTAAA	-38	NA	73735037	73736158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73735091_73735240_73735500_73735727_73735849_73735929
transcript_86053.known	chr7	+	1695	1	FSM	ENSG00000189143.10	ENST00000340958.4	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCTCTGATTTCA	73827393	True	NA	24	True	AATAAA	-24	NA	73830995	73832690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73831000_73832700
transcript_86054.known	chr7	-	922	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	3.13687742827162	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	-73842240	True	NA	-5	True	ATTAAA	-16	NA	73842516	73834589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_86061.known	chr7	+	2563	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_4	1552.64065385394	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
transcript_86064.known	chr7	+	2698	7	FSM	ENSG00000106682.16	ENST00000678815.1	2698	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1803.1326829222	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAGCTGCTCATGGA	74107081	True	NA	NA	False	AATAAA	-45	NA	74174357	74197122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74178655_74178827_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_86068.known	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	3199	junction_1	339.923167789429	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_86069.known	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	1570.72871225428	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	74107079	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_8607.known	chr1	+	1891	15	FSM	ENSG00000158864.13	ENST00000678507.1	1891	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	366.09163707287	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161197415	161214381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161197488_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86074.known	chr7	-	1685	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_5	112.176869273483	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGACCATGTGAAGCC	-74243111	True	NA	-25	True	AATAAA	-23	NA	74254399	74231501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_8608.known	chr1	+	1415	14	FSM	ENSG00000158864.13	ENST00000677837.1	1415	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	566.407792127058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCTGTTCCTCACTGGA	161187268	True	NA	NA	False	NA	NA	NA	161202364	161214239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161212591_161212655_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86081.known	chr7	-	1635	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	362.554142401986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGACCATGTGAAG	-74243170	True	NA	-27	True	AATAAA	-21	NA	74254458	74231503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
transcript_86082.known	chr7	-	1576	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_6	335.630418433398	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCATGTGAAGCCTCG	-74243101	True	NA	-22	True	AATAAA	-26	NA	74254389	74231498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_8609.known	chr1	+	2319	14	FSM	ENSG00000158864.13	ENST00000496553.6	2319	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	379.291616276335	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161201680	161214381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161203402_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86091.known	chr7	-	1029	2	FSM	ENSG00000287815.2	ENST00000661689.2	1050	2	21	0	21	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGAGACCTTGTCTCA	-74289246	True	NA	NA	False	NA	NA	NA	74289286	74280746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74281551_74289061
transcript_86093.known	chr7	+	865	2	FSM	ENSG00000263001.8	ENST00000652150.1	865	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCTAATATTTATATA	74650211	True	NA	NA	False	ATTAAA	-23	NA	74650230	74651491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74650797_74651192
transcript_86094.nic	chr7	-	1805	9	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	-15	4	intron_retention	FALSE	canonical	3	13	junction_4	12.9903810567666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAAGCCCCATTGTCCTC	-74888296	True	NA	-21	True	AGTAAA	-20	NA	74890588	74882158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74883042_74883348_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_86097.nic	chr7	-	1681	8	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	-15	4	intron_retention	FALSE	canonical	3	13	junction_4	13.5088784108218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAAGCCCCATTGTCCTC	-74888296	True	NA	-21	True	AGTAAA	-20	NA	74890588	74882158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74883042_74883348_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86099.known	chr7	-	2130	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	12.8555554575619	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	NA	False	NA	-25	True	AGTAAA	-16	NA	74890610	74882162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_8610.known	chr1	+	1508	13	FSM	ENSG00000158864.13	ENST00000677948.1	1508	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	494.778373505642	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187268	True	NA	19	True	AATAAA	-16	NA	161202364	161214381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86101.nic	chr7	-	984	7	ISM	ENSG00000289346.1	ENST00000625377.3	4346	23	-3	87013	-3	-87013	5prime_fragment	FALSE	canonical	3	13	junction_3	13.2790561913614	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGGAGAAGGATG	-74888296	True	NA	NA	False	NA	NA	NA	74890588	74883162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86106.known	chr7	-	1026	6	FSM	ENSG00000277072.5	ENST00000622215.1	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	13.9226434271657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCCCATTGTGTAGGCC	-74888274	True	NA	NA	False	NA	NA	NA	74890566	74883794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_86107.known	chr7	-	1047	5	FSM	ENSG00000277072.5	ENST00000611766.4	1047	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	13.8089644796415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCCTCTGCTGTGG	-74888274	True	NA	NA	False	NA	NA	NA	74890566	74883766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_86108.nic	chr7	-	1556	5	NIC	ENSG00000277072.5	novel	1026	6	NA	NA	-15	250	intron_retention	FALSE	canonical	3	13	junction_1	15.0748134316813	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGGAGAAGGATG	-74888296	True	NA	NA	False	NA	NA	NA	74890588	74883162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86109.nic	chr7	-	1764	4	NIC	ENSG00000277072.5	novel	1026	6	NA	NA	-15	248	intron_retention	FALSE	canonical	3	16	junction_1	13.490737563232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACAAATGGAGAAGGA	-74888296	True	NA	NA	False	NA	NA	NA	74890588	74883164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74884525_74887682_74887800_74888311_74888398_74890387
transcript_8611.known	chr1	+	1545	13	FSM	ENSG00000158864.13	ENST00000677045.1	1545	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	349.252535185263	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161202313	161214381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86118.nnic	chr7	+	760	6	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3357	7914	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	6.59090282131363	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	74889439	True	NA	NA	False	AATAAA	-19	NA	74890758	74905749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886_74900976_74905577
transcript_86123.nnic	chr7	+	619	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3357	3171	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	7.22409163839994	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	74889439	True	NA	NA	False	ATTAAA	-18	NA	74890758	74901006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886
transcript_86124.nnic	chr7	+	671	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3357	7914	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	4.84767985741633	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	74889439	True	NA	NA	False	AATAAA	-19	NA	74890758	74905749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74905577
transcript_86125.known	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	14.2481577756565	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	-75069496	True	NA	-26	True	AATAAA	-28	NA	75073802	75042182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_86126.known	chr7	-	3605	24	FSM	ENSG00000277053.4	ENST00000622829.4	3605	24	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_7	459.942903500153	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	NA	False	NA	NA	False	AATAAA	-14	NA	75237696	75185395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75186528_75187219_75187296_75188074_75188117_75189214_75189257_75190538_75190568_75192046_75192231_75192898_75192981_75193902_75193984_75194656_75194713_75196612_75196797_75196973_75197040_75197947_75198050_75199650_75199726_75200120_75200180_75201120_75201305_75202541_75202614_75207955_75208015_75209375_75209560_75210527_75210600_75212078_75212138_75213405_75213590_75215755_75215822_75217153_75217265_75237292
transcript_8614.known	chr1	+	1934	11	FSM	ENSG00000158864.13	ENST00000677471.1	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	374.802094444522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187268	True	NA	19	True	AATAAA	-16	NA	161202364	161214381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86149.known	chr7	+	1836	8	FSM	ENSG00000223705.10	ENST00000457988.5	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	134.155255778748	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409574	True	NA	17	True	AATAAA	-18	NA	75410361	75416787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75410461_75410605_75410727_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_86150.nnic	chr7	+	1549	8	NIC	ENSG00000223705.10	novel	1836	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	29	junction_2	144.197993136138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409546	True	NA	17	True	AATAAA	-18	NA	75410333	75416787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_75410461_75410605_75410727_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_8616.known	chr1	+	1296	12	FSM	ENSG00000158864.13	ENST00000676795.1	1296	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	406.857682185944	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187275	True	NA	19	True	AATAAA	-16	NA	161202371	161214381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_86161.nic	chr7	+	1302	6	FSM	ENSG00000223705.10	ENST00000689022.1	1269	6	-38	5	-6	0	multi-exon	FALSE	canonical	3	102	junction_4	124.798397425608	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409528	True	NA	17	True	AATAAA	-18	NA	75410315	75416787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_86162.nic	chr7	+	1310	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	-34	7	-6	0	multi-exon	FALSE	canonical	3	85	junction_4	129.378514445019	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409528	True	NA	17	True	AATAAA	-18	NA	75410315	75416787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
transcript_86169.nic	chr7	+	449	2	ISM	ENSG00000223705.10	ENST00000473960.1	500	3	12	612	12	-612	5prime_fragment	FALSE	canonical	3	360	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAGCGGAGACAGT	75409546	True	NA	NA	False	ATTAAA	-16	NA	75410333	75410927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_75410461_75410605
transcript_8617.known	chr1	-	474	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-161223589	False	NA	NA	False	AATAAA	-16	NA	161223628	161222291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
transcript_86171.nnic	chr7	-	875	2	NNC	ENSG00000127946.17	novel	583	6	NA	NA	-27257	-16331	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTTTTTTTTTTC	-75639061	False	NA	NA	False	AAAAAG	-6	NA	75639100	75598422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75599248_75639050
transcript_86172.known	chr7	-	503	2	FSM	ENSG00000127946.17	ENST00000479835.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCTGCCCTCAAAAAAA	-75738420	True	NA	NA	False	NA	NA	NA	75738962	75733459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75733801_75738800
transcript_86175.nnic	chr7	-	593	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	-6910	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	115.014008808589	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75779091	False	NA	-17	True	AATAAA	-14	NA	75779121	75769537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75779046
transcript_86176.nnic	chr7	-	580	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	8164	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.106931630229	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75781702	False	NA	-17	True	AATAAA	-14	NA	75781732	75769537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75781670
transcript_86178.nnic	chr7	-	703	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1592	0	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	40.4502437844597	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75788274	False	NA	-17	True	AATAAA	-14	NA	75788304	75769537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788119
transcript_86180.nnic	chr7	-	637	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1478	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	103.776469180424	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	NA	False	NA	-17	True	AATAAA	-14	NA	75788418	75769537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788299
transcript_86182.known	chr7	+	1831	5	FSM	ENSG00000005486.17	ENST00000454791.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	116.112822289358	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCTGCCTTTGTAT	75875641	True	NA	-31	True	NA	NA	NA	75879003	75888884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75879261_75881364_75881487_75881828_75882237_75883697_75883849_75887991
transcript_86184.nnic	chr7	+	1715	4	NNC	ENSG00000005486.17	novel	1721	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	140.4880382413	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGTGCTGGCGTGTGC	75875624	True	NA	6	True	TATAAA	-15	NA	75878986	75888921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_75879261_75881828_75882237_75883697_75883801_75887991
transcript_86185.known	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	10.0332779621949	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	75875671	True	NA	11	True	TATAAA	-20	NA	75879033	75888926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
transcript_86189.known	chr7	+	2446	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	57.3175947390212	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75903994	True	NA	26	True	AATAAA	-16	NA	75915154	75986855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
transcript_8619.known	chr1	+	2790	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.1053910742547	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGTTTCACCAACCC	161225436	True	NA	13	True	AGTAAA	-17	NA	161226059	161230746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_86192.known	chr7	+	2532	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	58.9690337276736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75904003	True	NA	26	True	AATAAA	-16	NA	75915163	75986855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
transcript_86199.known	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_10	28.0748703845172	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	-75992954	True	NA	-32	True	AATACA	-22	NA	75994595	75986830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_86201.known	chr7	-	1161	12	FSM	ENSG00000189077.11	ENST00000439537.5	1161	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	68.3105451486987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGCGTGTGTGTTCTC	-75992933	True	NA	-3	True	AATAAA	-17	NA	75994574	75986984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75987224_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_86207.known	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_9	27.7454500774451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-75993015	True	NA	-59	True	NA	NA	NA	75994656	75987040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_8621.nic	chr1	+	2538	10	NIC	ENSG00000158882.15	novel	2790	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	22.0756275863979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAGTATCCAAATAC	161225436	True	NA	44	True	AATAAA	-26	NA	161226059	161230615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161226137_161226475_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_86216.known	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_3	20.2703943940144	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75985543	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
transcript_86223.nnic	chr7	-	1249	9	NNC	ENSG00000127952.17	novel	1415	9	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	59.3838151351023	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76048017	False	NA	-14	True	NA	NA	NA	76048039	75996341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75996600_76000889_76000955_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86225.known	chr7	-	1415	9	FSM	ENSG00000127952.17	ENST00000248600.5	1415	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	58.5948749892002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTGTACTGATTCTT	-76045787	True	NA	-10	True	NA	NA	NA	76048003	75996337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047661
transcript_86226.known	chr7	-	1147	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_8	49.1259541892063	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	-76045737	True	NA	-81	True	NA	NA	NA	76047953	75996408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
transcript_86232.nic	chr7	-	1151	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	60.5683961505082	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76048017	False	NA	-14	True	NA	NA	NA	76048039	75996341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86234.nic	chr7	-	1108	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	61.0496619522975	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	-76045771	True	NA	-38	True	NA	NA	NA	76047987	75996365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86235.known	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	65.5413355575447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045767	True	NA	-14	True	NA	NA	NA	76047983	75996341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
transcript_8624.known	chr1	+	1406	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	161258492	True	NA	NA	False	AATAAA	-32	NA	161258744	161285450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161258984_161283667_161283723_161284338
transcript_86240.known	chr7	+	2170	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	0	0	0	0	multi-exon	FALSE	canonical	3	2650	junction_8	101.343398280302	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	76024862	True	NA	19	True	AATAAA	-23	NA	76048105	76067508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_86246.known	chr7	+	1548	8	FSM	ENSG00000146701.12	ENST00000432020.2	1548	8	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	965.231832150141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCAGCCGCTGTGTCA	76024917	True	NA	NA	False	NA	NA	NA	76048160	76067067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_86247.known	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	911.988207048709	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	76024841	True	NA	17	True	AATAAA	-21	NA	76048084	76067506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_86249.known	chr7	+	648	2	FSM	ENSG00000146701.12	ENST00000461263.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTCGCATTGCCTT	76024807	True	NA	8	True	ATTAAA	-19	NA	76048050	76049047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76048575
transcript_86250.known	chr7	+	777	3	FSM	ENSG00000106211.10	ENST00000248553.7	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	1939	junction_1	806	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGGCCCAGGCCCTG	76283919	True	NA	62	True	AATAAA	-17	NA	76302672	76304292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76303077_76303801_76303866_76303983
transcript_86251.known	chr7	+	527	3	FSM	ENSG00000106211.10	ENST00000429938.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1764	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCCCAGGCCCTGGTG	76303486	False	NA	65	True	AATAAA	-20	NA	76303576	76304295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76303728_76303801_76303866_76303983
transcript_86252.known	chr7	+	1455	2	FSM	ENSG00000106211.10	ENST00000447574.1	1455	2	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_1	0	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTCTCAAATAAAGTTC	76283934	False	NA	30	True	NA	NA	NA	76302687	76304260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76303866_76303983
transcript_86253.known	chr7	-	3705	2	FSM	ENSG00000170027.7	ENST00000307630.5	3705	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTGCTCCTTAGCTTC	-76320395	True	NA	-20	True	AATAAA	-14	NA	76358991	76326798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_76330234_76358721
transcript_86254.known	chr7	+	1483	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	10.6763465192921	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	76397309	True	NA	NA	False	AATAAA	-15	NA	76397517	76442071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_86256.known	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	85.8976134709225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457834	True	NA	24	True	AATAAA	-16	NA	76461708	76505991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86257.nic	chr7	+	2537	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	48.3505716385833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461671	76505991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86261.nic	chr7	+	2361	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	59.1349093175934	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461682	76505991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86263.nnic	chr7	+	1270	6	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	93.0346172131643	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461675	76505991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_76461837_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86266.known	chr7	+	3384	18	FSM	ENSG00000127947.16	ENST00000248594.11	3384	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	65.8814600779834	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	77536350	False	NA	19	True	ATTAAA	-23	NA	77537294	77640069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77537646_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_86267.known	chr7	+	2316	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	70.3301163052897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	77537896	True	NA	NA	False	NA	NA	NA	77538034	77639280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_8627.known	chr1	+	1308	6	FSM	ENSG00000143252.16	ENST00000367975.7	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	97.4379802746342	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	161306951	True	NA	12	True	ATTAAA	-31	NA	161314380	161363206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161356676_161356841_161362328
transcript_86271.nnic	chr7	-	755	4	FSM	ENSG00000214293.10	ENST00000687850.1	768	4	-8	21	-1	0	multi-exon	FALSE	canonical	3	17	junction_3	46.4781908234628	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-77694728	True	NA	NA	False	AATAAA	-16	NA	77696275	77683850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77695895_77696019_77696171
transcript_86273.known	chr7	-	3168	3	FSM	ENSG00000214293.10	ENST00000654794.2	3180	3	12	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	2.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGCTATCCAGTTTA	-77694718	True	NA	-10	True	AATAAA	-4	NA	77696265	77681580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77695895
transcript_86274.nnic	chr7	-	666	3	FSM	ENSG00000214293.10	ENST00000687769.1	641	3	-22	-3	0	0	multi-exon	FALSE	canonical	2	10	junction_2	54	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-77694708	True	NA	NA	False	AATAAA	-16	NA	77696255	77683850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77696117
transcript_86275.known	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	44	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-77694708	True	NA	-36	True	NA	NA	NA	77696255	77681606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77696171
transcript_86276.nic	chr7	-	1136	3	FSM	ENSG00000214293.10	ENST00000690779.1	977	3	-159	0	-144	0	multi-exon	FALSE	canonical	3	6	junction_1	53.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-77696356	False	NA	NA	False	AATAAA	-16	NA	77696421	77683850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684334_77685201_77685329_77695895
transcript_86277.known	chr7	-	609	3	FSM	ENSG00000214293.10	ENST00000416650.5	609	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAAATTGTGTAGG	-77694715	True	NA	NA	False	AAAACA	-38	NA	77696262	77683942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684334_77685201_77685329_77696171
transcript_86278.known	chr7	-	902	2	FSM	ENSG00000214293.10	ENST00000447009.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATCACATATACAGAAG	-77694706	True	NA	NA	False	ATTAAA	-37	NA	77696253	77684784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77685329_77695895
transcript_86280.known	chr7	+	6406	8	FSM	ENSG00000187257.16	ENST00000334955.13	6406	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	14.7841614091374	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTACTTTTGTAATT	77694391	True	NA	12	True	AATAAA	-21	NA	77696458	77783022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77697056_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_86284.nic	chr7	+	813	3	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-44	33544	-44	-23875	5prime_fragment	FALSE	canonical	3	83	junction_1	1.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAGAAAAAGAAAC	77694347	True	NA	-21	True	ATTAAA	-9	NA	77696414	77749478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_77697056_77736409_77736527_77749423
transcript_86285.nic	chr7	+	682	2	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-44	46572	-44	-36903	5prime_fragment	FALSE	canonical	3	83	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAGAAAAAAAGAAACA	77694347	True	NA	NA	False	ATTAAA	-19	NA	77696414	77736450	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_77697056_77736409
transcript_86286.known	chr7	-	877	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACATGACTCTTGA	-77795587	True	NA	-9	True	AATAAA	-18	NA	77798434	77793727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77794424_77798253
transcript_86287.known	chr7	+	5198	20	FSM	ENSG00000006576.16	ENST00000416283.6	5198	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.9063062575924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTTTTTGGTTTGTT	77796514	True	NA	NA	False	ATTAAA	-18	NA	77798791	77957503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77798972_77840220_77840301_77854732_77854835_77893607_77893665_77893981_77893994_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
transcript_86288.known	chr7	+	1977	12	FSM	ENSG00000006576.16	ENST00000424760.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	12.35695006367	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	77796535	True	NA	2	True	AATAAA	-15	NA	77798812	77940459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029
transcript_86290.nic	chr7	+	1957	11	ISM	ENSG00000006576.16	ENST00000424760.5	1977	12	-40	2251	-19	195	5prime_fragment	TRUE	canonical	3	78	junction_10	12.6728055299527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTCTGTATCATTC	77796495	True	NA	NA	False	AATAAA	-17	NA	77798772	77938208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709
transcript_86291.known	chr7	+	1738	9	FSM	ENSG00000006576.16	ENST00000415251.6	1738	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	6.10327780786685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTACTCTTTTTGAGCT	77796610	True	NA	NA	False	AATAAA	-33	NA	77798887	77923392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622
transcript_86294.known	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.0178344238091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-78770131	False	NA	-21	True	AATAAA	-37	NA	78771080	78255788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
transcript_86295.nic	chr7	-	1122	4	ISM	ENSG00000187391.22	ENST00000628781.1	2013	9	-253	245696	-10	236	5prime_fragment	FALSE	canonical	3	46	junction_2	4.24264068711928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACATGAAATTCTG	-78770384	False	NA	NA	False	TATAAA	-38	NA	78771333	78501484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_78501788_78521429_78521646_78627119_78627240_78770850
transcript_86297.known	chr7	+	10083	8	FSM	ENSG00000127955.17	ENST00000649796.2	10083	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	34.2904758598343	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCATATTATTTTT	80129562	True	NA	NA	False	AATAAA	-18	NA	80134830	80226181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135279_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86301.known	chr7	+	3237	8	FSM	ENSG00000127955.17	ENST00000649922.1	3237	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.288322368055	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTTAATAAATCCTAATA	80129584	True	NA	-24	True	AATGAA	-25	NA	80134852	80219362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135274_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86302.known	chr7	+	1939	8	FSM	ENSG00000127955.17	ENST00000649214.1	1939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.288322368055	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACATTGCACAGACT	80129583	True	NA	0	True	AATAAA	-11	NA	80134851	80218032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135279_80188924_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86303.known	chr7	+	3134	6	FSM	ENSG00000127955.17	ENST00000650431.1	3134	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.855888495637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAATTTTACAAA	80129533	True	NA	2	True	AATAAA	-15	NA	80134801	80219388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135279_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86307.nnic	chr7	+	982	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	129	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	83459825	False	NA	24	True	AATAAA	-22	NA	83459837	83465347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_+_83460267_83464794
transcript_86309.nnic	chr7	+	846	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	248	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	83459825	False	NA	20	True	AATAAA	-18	NA	83459837	83465343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_+_83460267_83464926
transcript_86311.known	chr7	-	8113	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_15	14.9330537315714	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTGTGTAGCTCAGT	-84194708	False	NA	NA	False	AGTAAA	-20	NA	84194789	83955776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_8632.known	chr1	+	1127	5	FSM	ENSG00000143252.16	ENST00000342751.8	1127	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	321.826331272008	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCTCCTTGAAATCT	161306951	True	NA	-5	True	ATTAAA	-14	NA	161314380	161363189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
transcript_86320.known	chr7	+	3702	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_9	38.2007989191625	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148797	True	NA	13	True	AATAAA	-17	NA	87152452	87196325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_86324.nic	chr7	-	1410	5	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	208.556946659659	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215865	True	NA	-2	True	AATAAA	-20	NA	87220578	87196159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220216
transcript_86325.known	chr7	-	1273	5	FSM	ENSG00000135185.12	ENST00000433078.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	84.2778143997577	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-87215874	True	NA	-4	True	AATAAA	-18	NA	87220587	87196161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220360
transcript_86326.nnic	chr7	-	1114	5	NNC	ENSG00000135185.12	novel	1273	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	205.996965997075	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215876	False	NA	-2	True	AATAAA	-20	NA	87220589	87196159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220523
transcript_86328.nnic	chr7	-	957	4	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	239.334261836639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215849	True	NA	-2	True	AATAAA	-20	NA	87220562	87196159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87220360
transcript_86329.nnic	chr7	-	821	4	NNC	ENSG00000135185.12	novel	1062	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	242.623164598931	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215876	False	NA	-2	True	AATAAA	-20	NA	87220589	87196159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87220523
transcript_8633.known	chr1	+	460	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	347.199510368318	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATTATTACATTCACC	161306952	True	NA	NA	False	AAGAAA	-24	NA	161314381	161362461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
transcript_86330.known	chr7	-	769	2	FSM	ENSG00000224046.3	ENST00000433446.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTGATAACTT	-87151924	True	NA	-3	True	AATAAA	-15	NA	87152282	87151422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87151659_87151749
transcript_86331.known	chr7	-	1062	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	40.8357142163028	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215019	False	4713	-2	True	AATAAA	-20	NA	87219732	87196159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
transcript_86332.nic	chr7	-	863	5	FSM	ENSG00000182165.19	ENST00000687819.1	814	5	-49	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_1	31.8158765398661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGAGTCCTAATTTTG	-87343670	True	NA	0	True	AATAAA	-21	NA	87345556	87325346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042_87345234_87345304
transcript_86335.known	chr7	-	1057	4	FSM	ENSG00000182165.19	ENST00000359941.11	1144	4	87	0	14	0	multi-exon	FALSE	canonical	2	8	junction_1	36.0647565729573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAATGATCTTCAGGT	-87343561	True	NA	NA	False	NA	NA	NA	87345447	87325114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042
transcript_86337.known	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	35.0269737329517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-87343629	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
transcript_86338.known	chr7	-	3150	3	FSM	ENSG00000182165.19	ENST00000661943.2	3168	3	18	0	6	0	multi-exon	FALSE	canonical	3	85	junction_2	8	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAACCTCACCCTTTG	-87343642	True	NA	NA	False	ATTAAA	-15	NA	87345528	87322942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345042
transcript_86339.known	chr7	-	526	3	FSM	ENSG00000182165.19	ENST00000432193.7	561	3	32	3	2	2	multi-exon	FALSE	canonical	1	6	junction_2	47.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	-87343616	True	NA	-3	True	AATAAA	-18	NA	87345502	87325349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345233
transcript_86340.known	chr7	-	1241	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	0	6	0	multi-exon	FALSE	canonical	3	44	junction_2	28.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTCTCTCTGG	-87343642	True	NA	NA	False	AATAAA	-12	NA	87345528	87324589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345304
transcript_86341.known	chr7	+	1213	4	FSM	ENSG00000005469.12	ENST00000412227.6	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTATCTGTATC	87345190	True	NA	NA	False	ATTAAA	-20	NA	87345692	87360116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205
transcript_86344.known	chr7	+	2064	11	FSM	ENSG00000105784.16	ENST00000394654.4	4063	11	217	1782	161	58	multi-exon	FALSE	canonical	1	1	junction_2	2.41660919471891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACGGGAAAGTT	87628568	False	NA	NA	False	TTTAAA	-8	NA	87628614	87830514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87807372_87807520_87816140_87816263_87829884
transcript_86345.known	chr7	+	2020	10	FSM	ENSG00000105784.16	ENST00000493037.5	2020	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.48451997499977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAATTTCATTTTTTC	87628407	False	NA	NA	False	NA	NA	NA	87628453	87830456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87816140_87816263_87829884
transcript_86349.nic	chr7	-	3168	13	NIC	ENSG00000075303.13	novel	4056	12	NA	NA	-5	-936	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	13.5182489825996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTGCCTAGTCGTTTT	-87874502	True	NA	NA	False	AATAAA	-15	NA	87876310	87834503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860071_87860170_87860571_87860641_87876095
transcript_8635.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000392169.6	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	402.54551157464	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	161306958	True	NA	NA	False	GGGGCT	-14	NA	161314387	161362433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161340593_161340656_161356676_161356841_161362328
transcript_86352.known	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	96.5414311779367	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	87871277	False	NA	33	True	AATAAA	-24	NA	87876533	87908373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_86356.known	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	36.454432101388	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	87871236	True	NA	NA	False	AATAAA	-28	NA	87876492	87909553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_86358.known	chr7	+	2694	12	FSM	ENSG00000006634.8	ENST00000413643.5	2694	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	102.745774681376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	87876190	True	NA	36	True	AATAAA	-27	NA	87876215	87908376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900281_87900350_87900763_87900879_87904291_87904417_87907187
transcript_86362.known	chr7	-	4056	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_10	7.31126155013931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTGTCAACATTT	-87874552	True	NA	-13	True	AATAAA	-18	NA	87876360	87833567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
transcript_8637.known	chr1	+	571	7	FSM	ENSG00000143252.16	ENST00000504963.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	391.603115411509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCCTACACATTATT	161306961	True	NA	NA	False	AAGAAA	-15	NA	161314390	161362452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
transcript_86371.nic	chr7	+	1353	11	ISM	ENSG00000006634.8	ENST00000265728.6	3655	12	-70	5143	-64	-2809	5prime_fragment	FALSE	canonical	3	273	junction_2	38.0973752376722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTAATTAGTTTTAT	87871166	True	NA	NA	False	NA	NA	NA	87876422	87904410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_86372.nnic	chr7	+	2423	11	NIC	ENSG00000006634.8	novel	2694	12	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	100.400996010996	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	87871166	True	NA	36	True	AATAAA	-27	NA	87876422	87908376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
transcript_8638.known	chr1	+	1871	1	FSM	ENSG00000288093.1	ENST00000667751.1	1871	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTCTTCAATGTGGA	161399984	True	NA	NA	False	AATAAA	-22	NA	161399997	161401868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161400000_161401900
transcript_86385.known	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2409	junction_3	183.184528354802	1046	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	-88191010	True	NA	-5	True	AATAAA	-17	NA	88220038	88205114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_86393.known	chr7	+	442	3	FSM	ENSG00000235436.11	ENST00000479881.1	442	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTCTTCTTCTAACGA	NA	False	NA	NA	False	NA	NA	NA	90119538	90124163	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90119866_90122066_90122092_90124073
transcript_86395.known	chr7	+	1219	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	3.16227766016838	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	90153870	True	NA	6	True	AATAAA	-16	NA	90154468	90164827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
transcript_86396.known	chr7	+	1054	4	FSM	ENSG00000164647.9	ENST00000475789.1	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGTGTTTCCTAGACA	90153857	True	NA	NA	False	NA	NA	NA	90154455	90162251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913
transcript_86404.known	chr7	+	3488	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	136	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397733	True	NA	32	True	ATTAAA	-17	NA	90403466	90415954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90403550_90405518_90405613_90412643
transcript_86405.known	chr7	+	3533	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	148.963828569966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397727	True	NA	32	True	ATTAAA	-17	NA	90403460	90415954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
transcript_86406.known	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	16.4976616375222	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	90344530	True	NA	2	True	AATAAA	-17	NA	90346715	90391453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86408.nic	chr7	+	1189	9	NIC	ENSG00000105793.16	novel	7489	10	NA	NA	9	109	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	38.3951494332292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATGCTTAAAAACAAGG	90344488	True	NA	17	True	ATTAAA	-22	NA	90346673	90385185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86409.known	chr7	+	6913	9	FSM	ENSG00000105793.16	ENST00000380058.7	6913	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	38.2557185267771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTAGTCAAGTGAATTC	90344521	True	NA	6	True	AATAAA	-2	NA	90346706	90391013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_8641.known	chr1	+	1330	6	FSM	ENSG00000081721.12	ENST00000367943.5	1330	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	66.3246560488632	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGTACAAAAATTTGA	161745360	True	NA	121	True	NA	NA	NA	161749785	161757238	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161750146_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_86410.known	chr7	+	775	8	FSM	ENSG00000105793.16	ENST00000417207.5	775	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	41.5363131021814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTCCAACATATCATCC	90344509	True	NA	NA	False	AAAACA	-20	NA	90346694	90384937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86411.known	chr7	+	1740	8	FSM	ENSG00000105793.16	ENST00000257659.12	1740	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	41.8422694198592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATATAAAAAATTA	90344479	True	NA	NA	False	NA	NA	NA	90346664	90385890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86412.known	chr7	-	317	3	FSM	ENSG00000223969.7	ENST00000415965.5	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATCATTGCTACAT	-90595714	False	NA	2	True	AATAAA	-18	NA	90595748	90590618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_90590729_90591715_90591902_90595727
transcript_86413.known	chr7	-	449	3	FSM	ENSG00000223969.7	ENST00000412669.2	497	3	45	3	45	0	multi-exon	FALSE	canonical	3	8	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	-90597319	False	NA	-2	True	AATAAA	-14	NA	90597353	90590622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_90590729_90591715_90591902_90597196
transcript_86414.known	chr7	-	450	3	FSM	ENSG00000223969.7	ENST00000441971.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	-90595856	False	54	-2	True	AATAAA	-14	NA	90595890	90590622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_90590729_90591715_90591902_90595732
transcript_86418.nnic	chr7	-	1991	3	NNC	ENSG00000127989.14	novel	3941	3	NA	NA	-5	431	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	80	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGTTTAAGGAAATGATA	-91878839	True	NA	-19	True	AATAAA	-18	NA	91880697	91872890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_91874765_91880054_91880114_91880639
transcript_86419.known	chr7	-	554	3	FSM	ENSG00000127989.14	ENST00000442961.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	79	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACGTTCTCCTGAAT	-91878832	True	NA	NA	False	NA	NA	NA	91880690	91874317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_91874765_91880054_91880114_91880642
transcript_8642.nic	chr1	+	1295	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	-2	-78	combination_of_known_junctions	FALSE	canonical	3	207	junction_1	77.2631865767909	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	161745330	True	NA	43	True	ATTAAA	-15	NA	161749755	161757160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_86420.known	chr7	-	3941	3	FSM	ENSG00000127989.14	ENST00000351870.8	3941	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	5.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCGGCCATAGTGGTGC	-91878844	True	NA	NA	False	NA	NA	NA	91880702	91870928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_91874765_91880054_91880114_91880656
transcript_86423.nic	chr7	+	1231	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-50	69937	-12	4824	5prime_fragment	TRUE	canonical	3	26	junction_6	3.79580864445326	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAGAAATACAGGAAA	91940797	False	NA	NA	False	GATAAA	-18	NA	91940827	92000876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86424.nic	chr7	+	1292	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-50	69876	-12	4885	5prime_fragment	FALSE	canonical	3	26	junction_6	3.79580864445326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGAAAACTCTTGA	91940797	False	NA	NA	False	ATTAAA	-17	NA	91940827	92000937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86425.nic	chr7	+	1396	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-50	69772	-12	4989	5prime_fragment	FALSE	canonical	3	26	junction_6	3.79580864445326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAATTAGAGCTGACTA	91940797	False	NA	NA	False	AATAAA	-4	NA	91940827	92001041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86427.nic	chr7	+	2471	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-50	68697	-12	6064	5prime_fragment	FALSE	canonical	3	26	junction_6	3.79580864445326	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAGAAAAGGGTAC	91940797	False	NA	15	True	AAAAAG	-21	NA	91940827	92002116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86428.nic	chr7	+	1010	7	ISM	ENSG00000127914.19	ENST00000674381.2	8366	34	-251	88572	-12	-1356	5prime_fragment	FALSE	canonical	1	2	junction_3	15.1180539605981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAAGGATGAGACA	91940797	False	NA	NA	False	NA	NA	NA	91940827	91994696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91980872_91980959_91992157_91992212_91992884_91993056_91994620
transcript_86429.known	chr7	+	1356	7	FSM	ENSG00000127914.19	ENST00000394564.5	1356	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	3.49602949390051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTGTCATTTATAA	91938113	True	NA	NA	False	AATACA	-15	NA	91940925	91996052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602
transcript_86430.nic	chr7	+	924	6	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-98	1356	-12	-1356	5prime_fragment	FALSE	canonical	3	28	junction_3	2.63818119165458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAAGGATGAGACA	91940797	False	NA	NA	False	NA	NA	NA	91940827	91994696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620
transcript_86431.nic	chr7	+	388	2	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-98	22274	-12	-22274	5prime_fragment	FALSE	canonical	3	34	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAACGTCAAGCAGTA	91940797	False	NA	25	True	NA	NA	NA	91940827	91973778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710
transcript_86432.known	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_9	72.5260276821916	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-92119143	True	NA	NA	False	ATTAAA	-17	NA	92134477	92112152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
transcript_86433.known	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	230.758866180668	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-92134792	False	NA	63	True	NA	NA	NA	92134803	92113411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
transcript_86444.nic	chr7	-	3432	17	FSM	ENSG00000001631.17	ENST00000692807.1	4157	17	0	725	0	97	multi-exon	FALSE	canonical	0	0	junction_16	27.0427179430988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATAACACTGTTATTTA	-92243243	True	NA	-24	True	AATAAA	-23	NA	92245923	92200013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426
transcript_86447.known	chr7	-	4079	19	FSM	ENSG00000001631.17	ENST00000394505.7	4079	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	26.6843112921395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-92243234	True	NA	-22	True	AATAAA	-19	NA	92245914	92199412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245172_92245789
transcript_86450.known	chr7	-	855	7	ISM	ENSG00000001631.17	ENST00000690529.1	3829	18	0	36159	0	665	5prime_fragment	FALSE	canonical	0	0	junction_5	37.2174540892964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAAACTAATGTCATA	-92243240	True	NA	NA	False	NA	NA	NA	92245920	92235578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426_92245596_92245789
transcript_86451.known	chr7	-	665	3	ISM	ENSG00000001631.17	ENST00000452773.6	324	4	11	-21	-1	21	intron_retention	FALSE	canonical	0	0	junction_2	33	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCAACAGTGAAATAAC	-92243235	True	NA	NA	False	AAAAAG	-31	NA	92245915	92241080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92241153_92242033_92242138_92245426
transcript_86454.known	chr7	-	4369	24	FSM	ENSG00000127980.16	ENST00000248633.9	4369	24	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_11	21.2243395607981	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTATCTGTTCTTTGT	-92525361	True	NA	-7	True	AATAAA	-20	NA	92528520	92487024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_86456.nic	chr7	-	2151	6	ISM	ENSG00000127980.16	ENST00000428214.5	3681	23	-85	25684	0	-2276	5prime_fragment	FALSE	canonical	3	117	junction_2	16.5722659886933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTGCCAATGCAAATA	-92525361	True	NA	NA	False	AATAAA	-17	NA	92528520	92513140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_86457.known	chr7	+	4571	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	9.75961064797157	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAACCATTCCAGTTCC	92445430	True	NA	NA	False	AATAAA	-29	NA	92447481	92460075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
transcript_86459.nnic	chr7	+	2154	5	NNC	ENSG00000127993.16	novel	4667	5	NA	NA	0	-476	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_4	57.2336221114827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGTATTGAATGAACCA	92527446	True	NA	36	True	AATAAA	-33	NA	92528772	92537529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536433
transcript_86460.known	chr7	+	4667	5	FSM	ENSG00000127993.16	ENST00000265732.10	4667	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	21.7600551469889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACATAAAAAATTATTTA	92527468	True	NA	NA	False	AATAAA	-26	NA	92528794	92540481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536850
transcript_86463.nic	chr7	+	1923	3	ISM	ENSG00000127993.16	ENST00000481551.5	4093	4	0	4022	0	1433	5prime_fragment	FALSE	canonical	3	149	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCTTTCTATATAAT	92527446	True	NA	NA	False	NA	NA	NA	92528772	92533983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_92528925_92529475_92529667_92532403
transcript_86467.known	chr7	-	2434	12	FSM	ENSG00000234545.8	ENST00000438306.5	2434	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	274.835758617535	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-92587131	True	NA	-16	True	AATAAA	-20	NA	92590393	92560792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92585297_92585397_92590267
transcript_86469.known	chr7	-	1890	11	FSM	ENSG00000234545.8	ENST00000415397.6	1890	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	261.696484500652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAGAATCTTAGTAAAT	-92587067	True	NA	-124	True	NA	NA	NA	92590329	92561136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577677_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_8647.known	chr1	+	3084	17	FSM	ENSG00000118217.7	ENST00000681001.1	3084	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.4694988757327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	161764384	True	NA	NA	False	NA	NA	NA	161766319	161959658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161766443_161778243_161778321_161778669_161778696_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_86470.known	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	232.249025832187	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	-92587128	True	NA	19	True	NA	NA	NA	92590390	92560757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_86488.nic	chr7	-	739	10	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-19	5292	-16	0	5prime_fragment	FALSE	canonical	3	204	junction_1	176.543353189962	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGCAGTGAAGA	-92587147	True	NA	-41	True	TTTAAA	-21	NA	92590409	92566049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_86491.nic	chr7	-	729	9	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-19	9063	-16	-279	5prime_fragment	FALSE	canonical	3	305	junction_4	139.757323153386	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATATGATCAAATCCAT	-92587147	True	NA	NA	False	NA	NA	NA	92590409	92569820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_86499.known	chr7	-	931	11	FSM	ENSG00000234545.8	ENST00000427372.5	931	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	261.572188888651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAAAATCAGGATT	-92586808	False	3262	NA	False	AAAAAG	-34	NA	92590070	92562281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92589859
transcript_8650.known	chr1	+	3032	16	FSM	ENSG00000118217.7	ENST00000681557.1	3032	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	28.9344085821708	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	161764406	True	NA	NA	False	NA	NA	NA	161766341	161959658	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161766443_161778243_161778317_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_86503.known	chr7	-	410	3	FSM	ENSG00000234545.8	ENST00000480397.5	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAATACCTTAA	-92587076	True	NA	NA	False	NA	NA	NA	92590338	92579154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92579396_92581505_92581604_92590267
transcript_86504.nic	chr7	-	1503	7	ISM	ENSG00000105810.10	ENST00000265734.8	11612	8	750	9541	750	252	3prime_fragment	FALSE	canonical	3	60	junction_4	4.6785562825394	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAAAAATTCTAGTATA	-92833155	False	NA	6	True	AGTAAA	-44	NA	92833167	92614461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090
transcript_86505.known	chr7	+	407	3	FSM	ENSG00000237819.6	ENST00000686356.1	593	3	122	64	2	-51	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGCTGCCACACCG	92836356	True	NA	-56	True	ATTAAA	-3	NA	92836488	92917123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92836564_92854908_92854954_92916836
transcript_86506.known	chr7	+	432	2	FSM	ENSG00000237819.6	ENST00000435695.2	433	2	1	0	1	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTGTGATCTTTTTT	92836350	True	NA	8	True	ATTAAA	-18	NA	92836482	92917187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92836564_92916836
transcript_86507.known	chr7	+	5684	28	FSM	ENSG00000004766.17	ENST00000305866.10	5684	28	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.96099262902528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATTGATGAATACAAG	93231380	True	NA	NA	False	AATAAA	-15	NA	93232365	93361123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_86510.known	chr7	+	1193	12	FSM	ENSG00000004766.17	ENST00000251739.9	1193	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7.20422282042144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTCCCAAGTTGT	93231354	True	NA	NA	False	AATAAA	-20	NA	93232339	93276428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164
transcript_86517.nnic	chr7	+	992	2	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-340	-102203	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAATACTTAGGA	NA	False	NA	NA	False	NA	NA	NA	93591232	93807656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_93591772_93807203
transcript_86518.known	chr7	-	2207	5	FSM	ENSG00000105825.14	ENST00000222543.11	2207	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	10.280442597476	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTAAGCATTCAAACC	-93890296	True	NA	NA	False	AATAAA	-13	NA	93890753	93885395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93886897_93887260_93887432_93889034_93889224_93890136_93890320_93890590
transcript_8652.known	chr1	+	3111	16	FSM	ENSG00000118217.7	ENST00000680688.1	3111	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	29.8763377199341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCCAGCCTGGGCGACA	161764362	True	NA	NA	False	NA	NA	NA	161766297	161959632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851664_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_86521.known	chr7	-	1144	5	FSM	ENSG00000105825.14	ENST00000650573.1	1144	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	26.7861904719577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATATTTGAGAATAAAA	-93890290	True	NA	-55	True	AATATA	-13	NA	93890747	93886470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93886897_93887260_93887432_93889016_93889224_93890136_93890320_93890590
transcript_86526.known	chr7	+	3019	2	FSM	ENSG00000127920.6	ENST00000248564.6	3019	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTGAGACTTAGGT	93921641	True	NA	NA	False	ATTAAA	-16	NA	93921734	93928610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93922234_93926090
transcript_86527.known	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	11.6714276000077	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	-94000060	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
transcript_86531.known	chr7	-	1646	13	FSM	ENSG00000127990.19	ENST00000642638.1	1646	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	88.4632299633896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAATACAACATAACTT	-94652777	True	NA	NA	False	NA	NA	NA	94656127	94585365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94644605_94644668_94655989
transcript_86533.known	chr7	-	1704	12	FSM	ENSG00000127990.19	ENST00000445866.7	1704	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.1150595916811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTAATGACTGGTGAAA	-94652796	True	NA	NA	False	AATAAA	-31	NA	94656146	94585231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94597929_94598005_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_86536.known	chr7	-	1686	12	FSM	ENSG00000127990.19	ENST00000646559.1	1686	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	77.1183484614491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	-94652823	True	NA	NA	False	AAAACA	-27	NA	94656173	94585263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94644605_94644668_94655989
transcript_86537.known	chr7	-	1733	12	FSM	ENSG00000127990.19	ENST00000644816.1	1733	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.1936419550881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGTGAAATTTACTTC	-94652857	True	NA	NA	False	AATAAA	-39	NA	94656207	94585223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94587777_94587813_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_86539.known	chr7	-	1566	11	FSM	ENSG00000127990.19	ENST00000646098.1	1566	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	65.0323765519914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	-94652819	True	NA	NA	False	NA	NA	NA	94656169	94585293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618933_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_86540.known	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	24.7919341722263	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-94652783	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_86543.known	chr7	-	1532	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	62.845489540265	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCCTAATGACTGG	-94652827	True	NA	NA	False	AATAAA	-26	NA	94656177	94585236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
transcript_86544.known	chr7	-	1672	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	68.8187815306114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652857	True	NA	NA	False	AATAAA	-40	NA	94656207	94585222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_86548.known	chr7	-	1359	9	FSM	ENSG00000127990.19	ENST00000643206.1	1359	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	73.192276744203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652798	True	NA	NA	False	AATAAA	-40	NA	94656148	94585222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94655989
transcript_86549.known	chr7	+	3931	18	FSM	ENSG00000127995.17	ENST00000297273.9	3931	18	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_9	19.4466709331089	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	94509197	True	NA	39	True	ATTAAA	-24	NA	94509808	94557019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94537471_94537895_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
transcript_8655.known	chr1	+	8524	8	FSM	ENSG00000152332.16	ENST00000489294.2	8524	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.97700777617927	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTATACTTAGTATA	162494597	True	NA	35	True	AATAAA	-36	NA	162497817	162529631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162498269_162499954_162500248_162500912_162501105_162503753_162503849_162512499_162512577_162512724_162512824_162518101_162518191_162522403
transcript_86551.known	chr7	+	6394	2	FSM	ENSG00000242265.6	ENST00000615790.5	6394	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	94656527	False	NA	25	True	AATAAA	-30	NA	94656545	94669692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94656581_94663333
transcript_86552.known	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	90.6862723900371	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_86554.known	chr7	-	1099	9	FSM	ENSG00000105854.13	ENST00000446142.5	1099	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	138.434099845378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTAAATTGTACTTTT	-95431721	True	NA	NA	False	NA	NA	NA	95434976	95405338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416171_95416246_95424514_95424586_95434877
transcript_86555.known	chr7	-	1876	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_6	41.821047332653	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGGAGTTATATTAAAGA	NA	False	NA	NA	False	ATTAAA	-2	NA	95435329	95404896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_86558.known	chr7	+	1029	2	FSM	ENSG00000231170.7	ENST00000663696.1	1029	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTTAGAAATAGACTCAC	NA	False	NA	NA	False	AATAGA	-29	NA	95596705	95614001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_95596784_95613050
transcript_86559.nic	chr7	+	2461	13	NIC	ENSG00000158560.14	novel	774	7	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	2.52762514801718	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCACCAGTGTGAGTA	95837027	True	NA	2	True	AATAAA	-14	NA	95837532	96098424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_95837650_95869882_95869999_95977511_95977602_95984814_95984978_95987055_95987156_95995947_95996074_96028174_96028322_96032666_96032781_96035618_96035753_96039276_96039422_96076056_96076198_96080362_96080489_96097482
transcript_86561.known	chr7	-	3192	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_9	101.488915650922	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTTGTTTGGTCTTGT	-96316320	True	NA	-4	True	AATAAA	-15	NA	96322147	96120220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_86567.nic	chr7	-	1147	6	ISM	ENSG00000004864.14	ENST00000416240.6	3192	18	11	72464	0	463	5prime_fragment	FALSE	canonical	3	353	junction_1	19.5407267009188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCACATGTATATCATT	-96316309	True	NA	NA	False	NA	NA	NA	96322136	96192684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_86568.nic	chr7	-	857	6	ISM	ENSG00000004864.14	ENST00000416240.6	3192	18	11	72754	0	173	5prime_fragment	FALSE	canonical	3	353	junction_1	19.5407267009188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATAAGTTATGTAGTG	-96316309	True	NA	NA	False	AGTAAA	-20	NA	96322136	96192974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_86571.known	chr7	-	568	5	FSM	ENSG00000004864.14	ENST00000472162.2	568	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	166.725073099399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGGGACAATGCTAGGAC	-96316309	True	NA	NA	False	AATACA	-29	NA	96322136	96193147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96193184_96208837_96208978_96277195_96277339_96296897_96296952_96321941
transcript_86578.known	chr7	-	582	3	FSM	ENSG00000127922.10	ENST00000623498.3	582	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3877.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGAGCATGCTCCGG	-96654260	True	NA	NA	False	NA	NA	NA	96709826	96645587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96645937_96694797_96694892_96709687
transcript_86581.known	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7023	junction_1	367	6127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	-96654325	True	NA	NA	False	AATACA	-19	NA	96709891	96687950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96688967_96694797_96694892_96709687
transcript_86585.known	chr7	+	731	3	FSM	ENSG00000196636.8	ENST00000360382.4	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCATATTAGTCTTCT	97110893	True	NA	NA	False	TTTAAA	-13	NA	97117722	97181487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97117898_97136387_97136468_97181011
transcript_86589.known	chr7	+	952	2	FSM	ENSG00000196636.8	ENST00000432641.3	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	97110868	True	NA	16	True	AATAAA	-16	NA	97117697	97181763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97117898_97181011
transcript_86590.known	chr7	+	1061	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.7938424357067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCACATGTCTTT	97732057	True	NA	NA	False	AATAAA	-18	NA	97732085	97740472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
transcript_86591.known	chr7	+	1011	6	FSM	ENSG00000006128.12	ENST00000346867.4	1011	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	97732055	True	NA	NA	False	AATAAA	-11	NA	97732083	97740465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734825_97734850_97736298_97736353_97739873
transcript_86594.nnic	chr7	-	931	2	NIC	ENSG00000285725.1	novel	1910	3	NA	NA	-1928	-3621	intron_retention	FALSE	canonical	3	29	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTCTTCCTGTTTGCT	-97969397	True	NA	-2	True	AATAAA	-20	NA	97972332	97969997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_97970731_97972134
transcript_86595.nnic	chr7	-	833	2	NNC	ENSG00000243554.1	novel	447	6	NA	NA	-93	-2400	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATCGAAAAA	-97969412	True	NA	NA	False	NA	NA	NA	97972347	97971404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_97972025_97972134
transcript_86596.known	chr7	-	2059	12	FSM	ENSG00000284707.2	ENST00000641315.1	2059	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	162.470849260734	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAACCATTGCTGTAG	-97928231	True	NA	-13	True	AATAAA	-8	NA	97928411	97852135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869077_97928081
transcript_86597.known	chr7	-	2356	14	FSM	ENSG00000070669.17	ENST00000175506.8	2356	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	193.64858674395	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTATGTTCATGCAG	NA	False	NA	5	True	AATAAA	-26	NA	97872542	97852117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718_97871997_97872350
transcript_86599.known	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	145.233337158595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	-97867125	True	NA	-81	True	NA	NA	NA	97872436	97852203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
transcript_8660.known	chr1	+	2377	11	FSM	ENSG00000117143.13	ENST00000271469.7	2377	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	46.2156899764571	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGTACTTGAAGAAATTA	162558201	True	NA	25	True	AATAAA	-26	NA	162561505	162599842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731_162592783_162597791_162597859_162599270
transcript_86601.known	chr7	-	2289	13	FSM	ENSG00000070669.17	ENST00000394309.7	2289	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	153.276144226324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTGTAGTCATTTAT	-97866820	False	5311	-5	True	AATAAA	-16	NA	97872131	97852127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718
transcript_86603.known	chr7	-	2385	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_7	62.3204086422204	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTTGTGGACCTC	-97867097	True	NA	NA	False	AATAAA	-18	NA	97872408	97851676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
transcript_86611.known	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	167.575684393649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	-97867083	True	NA	-29	True	NA	NA	NA	97872394	97852151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
transcript_86615.nnic	chr7	-	1038	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-111	-205	multi-exon	FALSE	canonical	3	83	junction_1	24.2257897474755	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCGCCTGTCAGTTGTT	-97969430	True	NA	NA	False	TATAAA	-17	NA	97972365	97966294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_86616.nnic	chr7	-	956	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-111	-287	multi-exon	FALSE	canonical	3	83	junction_1	24.2257897474755	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTTTCTCTAAAAT	-97969430	True	NA	30	True	NA	NA	NA	97972365	97966376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_86617.nnic	chr7	-	744	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-111	-499	multi-exon	FALSE	canonical	3	83	junction_1	24.2257897474755	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTCTTTTTTTTT	-97969430	True	NA	-9	True	NA	NA	NA	97972365	97966588	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_86619.nnic	chr7	-	874	3	NIC	ENSG00000285725.1	novel	1910	3	NA	NA	-1961	-34	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	49	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATATTTGGTTTTCTTC	-97969430	True	NA	-4	True	NA	NA	NA	97972365	97966410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_97966978_97969769_97969846_97972134
transcript_86623.known	chr7	+	667	3	FSM	ENSG00000164713.10	ENST00000456357.6	667	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	85.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	98252124	True	NA	24	True	AATAAA	-17	NA	98252378	98291524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_98252529_98282350_98282454_98291110
transcript_86624.known	chr7	-	784	1	FSM	ENSG00000214389.2	ENST00000398259.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAAGTTCAGACTTCA	NA	False	NA	NA	False	NA	NA	NA	98386584	98385800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_98385800_98386600
transcript_86626.known	chr7	+	1715	12	FSM	ENSG00000130429.15	ENST00000451682.5	1715	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	331.407766109994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	99365826	True	NA	NA	False	AATAAA	-10	NA	99374729	99394776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99376432_99376575_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_86628.known	chr7	+	1578	11	FSM	ENSG00000130429.15	ENST00000427217.6	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	292.654557456398	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	99365826	True	NA	NA	False	AATAAA	-35	NA	99374729	99394801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377357_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_86630.known	chr7	+	1505	11	FSM	ENSG00000130429.15	ENST00000458033.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	290.281053463708	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	99365826	True	NA	NA	False	NA	NA	NA	99374729	99394712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377357_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_86631.known	chr7	+	1509	11	FSM	ENSG00000130429.15	ENST00000431816.6	1509	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	294.237132259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	99365826	True	NA	NA	False	NA	NA	NA	99374729	99394712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_86633.known	chr7	+	1669	11	FSM	ENSG00000130429.15	ENST00000645391.1	1669	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	291.879786898648	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	99365771	True	NA	NA	False	AATAAA	-35	NA	99374674	99394801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377337_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_86635.known	chr7	+	1582	10	FSM	ENSG00000241685.10	ENST00000262942.10	1582	10	0	0	0	0	multi-exon	TRUE	canonical	3	741	junction_7	93.1128347758783	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	99315648	True	NA	8	True	AATAAA	-15	NA	99325897	99366262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99363542_99363634_99365890
transcript_86637.known	chr7	+	1511	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	54.9080038690981	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	99365826	True	NA	NA	False	AAAAAG	-15	NA	99374729	99394816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_8664.known	chr1	+	2294	10	FSM	ENSG00000117143.13	ENST00000367926.8	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	57.0550957462809	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	162558228	True	NA	20	True	AATAAA	-21	NA	162561532	162599837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
transcript_86658.known	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_5	96.7752034355909	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-99361814	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
transcript_86659.known	chr7	-	767	6	FSM	ENSG00000106244.13	ENST00000426447.3	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	302.454624696003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGATGGGGGGGGGGA	-99361807	True	NA	NA	False	NA	NA	NA	99408590	99396522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403526_99404861_99404954_99408535
transcript_86675.known	chr7	+	1556	11	FSM	ENSG00000130429.15	ENST00000455009.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	297.233981906511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATGAACTGCTTCAAAA	99365803	True	NA	NA	False	NA	NA	NA	99374706	99394732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377333_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_86681.known	chr7	+	1823	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_6	201.100441956506	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	99434266	True	NA	26	True	ATTAAA	-14	NA	99438942	99457373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
transcript_86682.known	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	151.023987822992	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	99438898	False	NA	-5	True	NA	NA	NA	99438921	99457342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_86684.known	chr7	+	942	8	FSM	ENSG00000160917.15	ENST00000441580.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	301.811672594493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCTGGCCCGCAGA	99439365	False	NA	NA	False	NA	NA	NA	99439375	99456589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99439597_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_86686.known	chr7	-	5464	8	FSM	ENSG00000106246.18	ENST00000292478.9	5464	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	20.3960780543711	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-99435182	True	NA	NA	False	NA	NA	NA	99438798	99416738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438691
transcript_86693.known	chr7	+	1139	6	FSM	ENSG00000106245.11	ENST00000403633.6	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	238.753764368229	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99407582	True	NA	17	True	AATAAA	-18	NA	99408640	99419616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99409005_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_86695.known	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	287.896925999567	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99393070	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_86697.known	chr7	+	585	5	FSM	ENSG00000106245.11	ENST00000496696.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	456.444068315057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGACACTCAAGCTTG	99393070	True	NA	NA	False	NA	NA	NA	99408968	99417598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99409005_99410036_99410170_99411063_99411187_99416137_99416261_99417428
transcript_86704.known	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2700	junction_3	2186.67179877447	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99437724	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
transcript_86705.known	chr7	-	305	4	FSM	ENSG00000241468.8	ENST00000394186.3	305	4	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_3	1359.73698437112	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCACCCCACGACCTTG	-99437718	True	NA	-150	True	NA	NA	NA	99466161	99458308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466128
transcript_86712.known	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	1118	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99437721	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99460085_99460194_99466110
transcript_86713.known	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	2008	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	-99437724	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99460085_99460194_99466128
transcript_86714.known	chr7	-	597	2	FSM	ENSG00000241468.8	ENST00000485011.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGAGCCGAGTTTAG	-99437743	True	NA	NA	False	NA	NA	NA	99466186	99459654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99460194_99466128
transcript_86719.known	chr7	+	1616	5	FSM	ENSG00000198556.14	ENST00000331410.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	14.3614066163451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	99471515	True	NA	20	True	AATAAA	-26	NA	99472889	99487605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99486475
transcript_8672.known	chr1	+	1528	9	FSM	ENSG00000132196.16	ENST00000254521.8	1528	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	17.1227188261678	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTCCTTTTGGAA	162789243	True	NA	1	True	AATAAA	-19	NA	162790701	162812823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162790836_162792658_162792863_162796584_162796678_162797801_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_86725.known	chr7	+	510	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.6714276000077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	99471537	True	NA	2	True	AATAAA	-17	NA	99472911	99482322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
transcript_86726.nnic	chr7	+	1231	4	NNC	ENSG00000198556.14	novel	2994	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	15.2970585407784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	99471499	True	NA	6	True	AATAAA	-21	NA	99472873	99482326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_99473057_99476402_99476481_99479660_99480039_99481734
transcript_86729.known	chr7	+	1884	3	FSM	ENSG00000198556.14	ENST00000488485.5	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCATGAATTTTT	99471517	True	NA	2	True	AATAGA	-12	NA	99472891	99481301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99479660
transcript_8673.nic	chr1	+	1482	9	NIC	ENSG00000132196.16	novel	2541	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	62.9234405845707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTCTTTTCCTTCCTT	162789257	True	NA	-5	True	AATAAA	-13	NA	162790715	162812817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_162790836_162792658_162792863_162796584_162796678_162797827_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_86733.known	chr7	-	2163	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	11	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGACTTGGCCTGTT	-99497587	True	NA	-8	True	AATAAA	-22	NA	99500281	99493239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99494632_99498715_99498843_99499637
transcript_86734.known	chr7	-	2017	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGTGACTTGGCCTG	-99497570	True	NA	-10	True	AATAAA	-20	NA	99500264	99493241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99494632_99499637
transcript_86735.known	chr7	-	325	2	FSM	ENSG00000160908.15	ENST00000464401.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTCTGTACTGCTAG	-99497010	False	53	NA	False	NA	NA	NA	99499704	99498584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99498843_99499637
transcript_86742.known	chr7	+	1601	5	FSM	ENSG00000197343.11	ENST00000320583.9	1601	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	33.618261406563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99558388	False	NA	13	True	NA	NA	NA	99558405	99564705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99562367_99562495_99563862
transcript_86746.nnic	chr7	+	654	4	NNC	ENSG00000197343.11	novel	1979	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.8775904766351	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99554844	True	NA	13	True	NA	NA	NA	99558632	99564705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_99558788_99560532_99560696_99561887_99561921_99564402
transcript_86747.known	chr7	+	1979	4	FSM	ENSG00000197343.11	ENST00000467680.5	1979	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	35.5902608401044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99558404	False	NA	13	True	NA	NA	NA	99558421	99564705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99558788_99560532_99560696_99561887_99562495_99563862
transcript_86748.nnic	chr7	+	1288	4	NIC	ENSG00000197343.11	novel	1601	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	38.19249489974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99554844	True	NA	13	True	NA	NA	NA	99558632	99564705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_99558788_99560532_99560696_99562367_99562495_99563862
transcript_86751.known	chr7	+	545	3	FSM	ENSG00000197343.11	ENST00000452314.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCTGCTCGGAAACTCC	99558549	False	NA	NA	False	NA	NA	NA	99558566	99564023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99558788_99560532_99560696_99563862
transcript_86754.known	chr7	+	1198	3	FSM	ENSG00000197343.11	ENST00000440391.5	1198	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99555037	False	NA	13	True	NA	NA	NA	99558825	99564705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99559018_99560532_99560696_99563862
transcript_86755.known	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-99550199	True	NA	-14	True	AATAAA	-20	NA	99552114	99546299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99548507_99551853
transcript_86758.known	chr7	+	4352	8	FSM	ENSG00000197037.11	ENST00000394152.7	4352	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	12.9220583436516	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTCTGTCCACTCCT	99616507	True	NA	NA	False	TATAAA	-17	NA	99616945	99632408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_86766.nnic	chr7	-	1211	3	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4674	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	15.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99934184	False	110	0	True	AATAAA	-20	NA	99934294	99923265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_99923604_99928839_99929622_99934203
transcript_86768.known	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99929523	False	97	0	True	AATAAA	-20	NA	99929620	99923265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99923604_99928839
transcript_86769.known	chr7	-	1181	4	FSM	ENSG00000160862.13	ENST00000292401.9	1181	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.35702260395516	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGAGAATCCTTTTTTT	-99975982	True	NA	NA	False	AATAAA	-24	NA	99976031	99966729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99967287_99968154_99968431_99971745_99972007_99975944
transcript_86773.known	chr7	+	9403	6	FSM	ENSG00000106261.17	ENST00000324306.11	9403	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	9.19565114605812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	100012308	True	NA	34	True	AATAAA	-20	NA	100015595	100041689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
transcript_86777.known	chr7	+	1449	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTTTTTGTTTTTAG	100012311	True	NA	NA	False	ATTAAA	-30	NA	100015598	100024960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100015727_100023418_100023933_100024153
transcript_86782.known	chr7	-	1441	6	FSM	ENSG00000166526.18	ENST00000413658.6	1441	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	65.214722264225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATATAACGTCTCTCTC	-100078310	True	NA	-4	True	ACTAAA	-19	NA	100081727	100064032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100064913_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_86783.known	chr7	-	2797	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	20.0957706993288	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGTGGTTTTGTGC	-100078306	True	NA	-2	True	ATTAAA	-21	NA	100081723	100069972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_86785.known	chr7	+	1904	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	51.2853536596951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	100048034	True	NA	5	True	AATAAA	-16	NA	100049773	100065038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
transcript_86786.nic	chr7	+	2144	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	37	junction_1	42.8682574873297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	100048032	True	NA	7	True	AATAAA	-18	NA	100049771	100065040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
transcript_86789.known	chr7	-	735	5	FSM	ENSG00000166526.18	ENST00000449785.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	65.479004268544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-100078322	True	NA	NA	False	AATATA	-32	NA	100081739	100071929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
transcript_86791.known	chr7	+	2009	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	30.3790863735052	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	100048034	True	NA	7	True	AATAAA	-18	NA	100049773	100065040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
transcript_86793.known	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	82.624989494032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-100078325	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
transcript_86798.known	chr7	+	1107	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	805.352434161515	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	100059278	True	NA	9	True	AATAAA	-21	NA	100088980	100091905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
transcript_86823.known	chr7	+	1171	2	FSM	ENSG00000168090.10	ENST00000465027.1	1171	2	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTACTATATGTTCTG	100059266	True	NA	NA	False	NA	NA	NA	100088968	100090362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100089067_100089289
transcript_86831.known	chr7	+	3591	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3855219513114	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	100100391	True	NA	NA	False	AAAAAG	-3	NA	100101642	100109039	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_86836.known	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.8462282283972	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	100100305	True	NA	45	True	NA	NA	NA	100101556	100107177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_86845.known	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	354.740038476007	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-100079116	True	NA	-1	True	ATTAAA	-23	NA	100101397	100092727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
transcript_86851.known	chr7	-	2727	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_14	245.643428321523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGATCCACTGCAGT	-100105897	True	NA	-12	True	AATAAA	-13	NA	100119346	100107078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
transcript_86852.known	chr7	-	2424	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_14	110.253256696775	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105909	True	NA	-3	True	AATAAA	-22	NA	100119358	100107069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
transcript_86854.known	chr7	-	2297	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	269.388044217532	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-100105915	True	NA	-11	True	AATAAA	-14	NA	100119364	100107077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
transcript_86855.known	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	282.070813586856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	-100119601	False	240	-41	True	NA	NA	NA	100119841	100107167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
transcript_8686.known	chr1	-	581	6	FSM	ENSG00000143248.13	ENST00000531954.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	129.856844255511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGAAGAACCTGGTGGA	-163321107	True	NA	NA	False	NA	NA	NA	163321735	163147473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163306232_163306330_163321621
transcript_86865.known	chr7	+	1681	14	FSM	ENSG00000221838.10	ENST00000445208.5	1681	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	31.099953385684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCAATCTACAACTTCC	100100305	True	NA	8	True	AAAAAG	-14	NA	100101556	100107140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_86867.known	chr7	+	1814	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.3542098856753	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTTCCTTCCGCTT	100101957	True	NA	16	True	AAAAAG	-22	NA	100102060	100107148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_86873.known	chr7	-	3084	14	FSM	ENSG00000166508.18	ENST00000621318.4	3084	14	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_11	362.496357867849	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTCGTTTTTAT	-100101911	False	NA	-2	True	ATTAAA	-22	NA	100101940	100092728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100101263
transcript_8689.known	chr1	-	5670	5	FSM	ENSG00000143248.13	ENST00000313961.10	5670	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	7.64852927038918	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGAGTCCTCCTTGAC	-163202122	True	NA	-1	True	ATTAAA	-21	NA	163202916	163142298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163202791
transcript_86899.known	chr7	+	1478	6	FSM	ENSG00000166997.8	ENST00000262932.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	10.5451410611713	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGGCCCAAAGTTTC	100118130	True	NA	23	True	ATTAAA	-23	NA	100119633	100125508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100119863_100122258_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
transcript_86927.nic	chr7	+	675	5	NIC	ENSG00000188186.11	novel	720	4	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_2	858.960818372992	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139497	True	NA	21	True	AATAAA	-21	NA	100148956	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_100149054_100149498_100149580_100152715_100152758_100153399_100153518_100153866
transcript_86941.known	chr7	+	613	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	815.924424604795	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139534	True	NA	21	True	AATAAA	-21	NA	100148993	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
transcript_86942.known	chr7	+	621	4	FSM	ENSG00000188186.11	ENST00000468582.5	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	842.228129560051	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTTTAGTGTTGGA	100139518	True	NA	30	True	AATAAA	-30	NA	100148977	100154212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153866
transcript_86950.known	chr7	+	519	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1045	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139452	True	NA	21	True	AATAAA	-21	NA	100148911	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100153399_100153518_100153866
transcript_86953.known	chr7	+	605	4	FSM	ENSG00000188186.11	ENST00000341942.10	594	4	-11	0	-5	0	multi-exon	FALSE	canonical	3	942	junction_1	504.529043322142	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139447	True	NA	21	True	AATAAA	-21	NA	100148906	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149580_100153399_100153518_100153866
transcript_86954.known	chr7	+	616	4	FSM	ENSG00000188186.11	ENST00000460732.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	737.732110367081	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139453	True	NA	21	True	AATAAA	-21	NA	100148912	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149580_100153399_100153518_100153849
transcript_86955.known	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	834.523949459943	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139474	True	NA	21	True	AATAAA	-21	NA	100148933	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
transcript_86956.known	chr7	+	720	4	FSM	ENSG00000188186.11	ENST00000473459.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	952.134560985065	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139897	False	NA	21	True	AATAAA	-21	NA	100149356	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100149580_100152715_100152758_100153399_100153518_100153866
transcript_86957.known	chr7	+	533	3	FSM	ENSG00000188186.11	ENST00000488338.2	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1000	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100152591	False	NA	21	True	AATAAA	-21	NA	100152679	100154203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100152758_100153399_100153518_100153866
transcript_86958.known	chr7	-	2405	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	12.328828005938	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-100164649	False	3968	-6	True	AATAAA	-15	NA	100168617	100159243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
transcript_86962.nic	chr7	-	1832	3	NIC	ENSG00000213420.8	novel	2129	4	NA	NA	-3	14	intron_retention	FALSE	canonical	3	18	junction_1	57.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATTATCAGGCATG	-100173416	True	NA	NA	False	NA	NA	NA	100177384	100173443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_100174766_100176206_100176366_100177033
transcript_86977.known	chr7	-	1244	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	0	578	0	0	multi-exon	FALSE	canonical	3	66	junction_1	111.979784882014	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	-100336245	True	NA	-6	True	AATAAA	-18	NA	100336307	100320913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_86983.known	chr7	-	788	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	4	-1	0	multi-exon	FALSE	canonical	3	11	junction_1	129.117001204334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	-100332482	True	NA	-5	True	AATAAA	-19	NA	100335939	100320912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_86985.known	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	103	junction_1	103.9838448991	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	-100332493	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_86991.known	chr7	-	537	5	FSM	ENSG00000078319.11	ENST00000675486.2	899	5	105	257	4	-149	multi-exon	FALSE	canonical	3	112	junction_1	93.9893611000735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	-100332403	True	NA	NA	False	CATAAA	-25	NA	100335860	100328835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_86995.known	chr7	+	683	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	45.7019328548221	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	100331443	True	NA	NA	False	AATAAA	-15	NA	100336124	100341328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
transcript_86997.known	chr7	-	602	4	FSM	ENSG00000078319.11	ENST00000674524.2	772	4	67	103	26	-98	multi-exon	FALSE	canonical	0	0	junction_3	160.15825506875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATCTCAGCTTCCAGC	-100332381	True	NA	NA	False	NA	NA	NA	100335838	100330091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335656
transcript_86999.known	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	234	junction_3	50.622788017519	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	-100332459	True	NA	NA	False	AATAAA	-21	NA	100335916	100329986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
transcript_87.known	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	19.5	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_+_10792_10897_11188_11403
transcript_87001.known	chr7	-	2364	18	FSM	ENSG00000078487.18	ENST00000684423.1	2364	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.455213750218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGGCTGGTCTCTAA	-100423673	False	155	-18	True	AATAAA	-16	NA	100428703	100400871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100401337_100401888_100402042_100402515_100402577_100403693_100403786_100404177_100404245_100405012_100405094_100406693_100406799_100407227_100407304_100408538_100408660_100409427_100409545_100415974_100416098_100416304_100416457_100417065_100417184_100419110_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_87003.known	chr7	-	2110	16	FSM	ENSG00000078487.18	ENST00000360951.8	2110	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1.4996295838936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTTGGCTGGTCTCTA	-100423634	False	155	-19	True	AATAAA	-15	NA	100428664	100400872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100401337_100403693_100403786_100404177_100404245_100405012_100405094_100406693_100406799_100407227_100407304_100408538_100408660_100409427_100409545_100415974_100416098_100416304_100416457_100417065_100417184_100419110_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_87010.known	chr7	+	2822	4	FSM	ENSG00000146834.14	ENST00000310512.4	2822	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	7.40870359029762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	100429748	True	NA	15	True	AATAAA	-27	NA	100429830	100434118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100431690_100432918_100433138_100433262_100433390_100433501
transcript_87011.known	chr7	+	2261	5	FSM	ENSG00000146834.14	ENST00000414441.5	2261	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.062074658569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTCTCGGTACTGTC	100423696	False	NA	14	True	AATAAA	-26	NA	100428816	100434117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100429041_100430614_100431690_100432918_100433138_100433262_100433390_100433501
transcript_87012.known	chr7	-	965	3	FSM	ENSG00000160813.7	ENST00000487452.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_2	105	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431393	True	NA	-32	True	AATAAA	-18	NA	100436423	100435281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100435534_100435630_100435768_100435847
transcript_87013.known	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	40.904614654095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	-100476914	True	NA	-30	True	ATTAAA	-19	NA	100479232	100466537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
transcript_87014.known	chr7	-	2318	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	19.6389281784928	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-100476896	True	NA	-11	True	ATTAAA	-38	NA	100479214	100466518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
transcript_87015.nnic	chr7	-	1337	4	NIC	ENSG00000166925.9	novel	2318	5	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	54.0514158515349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-100479234	False	NA	-11	True	ATTAAA	-38	NA	100479264	100466518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_100467169_100467551_100467601_100474273_100474441_100478793
transcript_87016.known	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	27.7759199686312	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	-100580988	True	NA	-5	True	AATAAA	-39	NA	100586129	100574010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
transcript_8702.known	chr1	+	1842	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	43.156519867809	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	163317326	True	NA	38	True	AATATA	-24	NA	163321934	163355764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_87024.known	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	63.1402209372124	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	100601011	True	NA	8	True	AATAAA	-18	NA	100602362	100608175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_87026.nnic	chr7	+	1393	9	NNC	ENSG00000106333.13	novel	960	4	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	81.1948851529454	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100603093	True	NA	4	True	AATAAA	-14	NA	100603223	100608171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_100603294_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_8703.known	chr1	+	1964	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	35.1008690194012	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	163317345	True	NA	33	True	AGTAAA	-45	NA	163321953	163355759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_87038.known	chr7	-	987	5	FSM	ENSG00000205307.12	ENST00000614631.4	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	12.852528934027	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAAAACAGTGTTGGT	-100573573	False	NA	-31	True	NA	NA	NA	100573608	100572255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296
transcript_87042.known	chr7	+	1053	6	FSM	ENSG00000106330.12	ENST00000223054.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	97.9109799767115	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTACTCATTTTCCA	100612090	False	NA	-39	True	AAAACA	-6	NA	100612101	100615326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612242_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_87043.nnic	chr7	+	1027	6	NNC	ENSG00000106330.12	novel	1154	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	141.902219855787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611286	True	NA	12	True	AATAAA	-21	NA	100612539	100615377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_100612603_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_87046.known	chr7	+	979	5	FSM	ENSG00000106330.12	ENST00000462372.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	155.514267834177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	100612040	False	NA	19	True	AATAAA	-28	NA	100612157	100615384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612242_100612729_100612997_100613476_100613707_100614866_100615032_100615151
transcript_87048.known	chr7	+	1154	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	30.2438010177292	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611286	True	NA	12	True	AATAAA	-21	NA	100612539	100615377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_87049.known	chr7	+	1115	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	159.00687878202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	100611302	True	NA	19	True	AATAAA	-28	NA	100612555	100615384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
transcript_87052.nic	chr7	-	731	6	ISM	ENSG00000077080.10	ENST00000160382.10	1524	14	9104	0	394	0	3prime_fragment	FALSE	canonical	3	12	junction_5	6.62117814289874	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	-100647194	True	NA	NA	False	AGTAAA	-20	NA	100647344	100643096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222
transcript_87054.known	chr7	+	1524	9	FSM	ENSG00000172354.10	ENST00000393924.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	72.3583746017004	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCCTTGCTGTGTTC	100675690	True	NA	34	True	CATAAA	-27	NA	100676137	100679174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_87056.known	chr7	+	850	2	FSM	ENSG00000172336.5	ENST00000303151.5	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	0	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	100692697	True	NA	17	True	AATAAA	-19	NA	100706120	100707486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100706305_100706820
transcript_87058.known	chr7	+	3315	14	FSM	ENSG00000146828.18	ENST00000354161.8	3315	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	24.0083811795778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCTGAGCAGTGCT	100850419	True	NA	14	True	AATAAA	-15	NA	100852712	100867010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_87067.nic	chr7	-	2223	9	ISM	ENSG00000196411.10	ENST00000487222.5	5058	16	11554	-3	116	0	3prime_fragment	FALSE	canonical	3	343	junction_7	54.3609177166832	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGGTGATGGACTAGA	-100813901	True	NA	-7	True	AATAAA	-32	NA	100813972	100802564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918
transcript_87070.known	chr7	+	1912	12	FSM	ENSG00000146828.18	ENST00000415287.5	1912	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	29.1462541715296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGTTTAGGAAAAATGAAAA	100850443	True	NA	NA	False	AATAAA	-17	NA	100852736	100865535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865359
transcript_87072.known	chr7	+	1693	9	FSM	ENSG00000087077.14	ENST00000200457.9	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	63.1050711115993	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	100859670	True	NA	15	True	AAGAAA	-27	NA	100867386	100873454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_87085.known	chr7	+	1303	8	FSM	ENSG00000087077.14	ENST00000619988.4	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	268.012488286555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCTAGAAGTACCTGC	100859781	False	NA	NA	False	NA	NA	NA	100867497	100873303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100867607_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_87094.known	chr7	+	2990	20	FSM	ENSG00000087087.20	ENST00000611405.5	2990	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	238.560154611832	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858191	True	NA	19	True	AATAAA	-16	NA	100875102	100888664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
transcript_87095.known	chr7	+	2955	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_17	184.710314484623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858214	True	NA	19	True	AATAAA	-16	NA	100875125	100888664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_87096.known	chr7	+	2964	20	FSM	ENSG00000087087.20	ENST00000614484.4	2964	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	243.203937313222	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858214	True	NA	19	True	AATAAA	-16	NA	100875125	100888664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
transcript_87097.known	chr7	+	2893	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_17	190.937633942085	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858273	True	NA	19	True	AATAAA	-16	NA	100875184	100888664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_87111.nic	chr7	-	654	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2908	-3	2753	0	3prime_fragment	FALSE	canonical	3	30	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100891297	False	NA	-4	True	AATAAA	-13	NA	100891480	100889993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_100890336_100891168
transcript_87115.nnic	chr7	+	1093	3	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	NA	False	NA	5	True	AATAAA	-21	NA	100922378	100943427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_87120.known	chr7	+	1093	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	52.8162432927178	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCTGCACCCCAGT	100965985	True	NA	NA	False	NA	NA	NA	100966237	100967746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
transcript_87123.nnic	chr7	-	583	4	NNC	ENSG00000227053.2	novel	442	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.006171781426	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	-101017107	True	NA	-1	True	AATAAA	-21	NA	101017638	101014319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_101014440_101015197_101015268_101015439_101015609_101017414
transcript_87124.known	chr7	+	502	3	FSM	ENSG00000205277.10	ENST00000473098.5	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	14	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101016790	False	NA	16	True	AATAAA	-22	NA	101016877	101018939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101016946_101017574_101017664_101018594
transcript_87125.known	chr7	-	372	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	6	7	-5	multi-exon	FALSE	canonical	3	23	junction_2	10	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-101017070	True	NA	-6	True	AATAAA	-16	NA	101017601	101014324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101014440_101015197_101015268_101017414
transcript_87126.known	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101017152	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101017664_101018594
transcript_87127.known	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	101017081	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101017398_101017574_101017664_101018594
transcript_87128.known	chr7	+	3156	9	FSM	ENSG00000106366.9	ENST00000223095.5	3156	9	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_3	3.07205143186113	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTCAGGACAGTCAC	101126983	True	NA	10	True	AATAAA	-16	NA	101127103	101139247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101127245_101128392_101128665_101130420_101130655_101131874_101132070_101133694_101133894_101135493_101135595_101135714_101135802_101137000_101137085_101137404
transcript_87129.known	chr7	+	1226	5	FSM	ENSG00000106367.15	ENST00000337619.11	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	40.3260151763102	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGGCCTTGGGCTCT	101148317	True	NA	12	True	AATAAA	-19	NA	101154475	101161276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101154518_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_87130.known	chr7	+	573	5	FSM	ENSG00000106367.15	ENST00000429457.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	107.728826225853	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGAGGAGATGGGT	101148366	False	NA	NA	False	NA	NA	NA	101154524	101160537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101154653_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_87131.known	chr7	+	779	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	117.22734322674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCTGCCTTTGCAGAA	101154911	True	NA	NA	False	NA	NA	NA	101154984	101160827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_87133.nnic	chr7	-	956	2	NNC	ENSG00000205267.5	novel	744	5	NA	NA	1060	426	intron_retention	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCCTGTGTGTGTTT	-101202454	False	NA	-5	True	ATTAAA	-13	NA	101202466	101201382	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_101202016_101202143
transcript_87134.nnic	chr7	-	853	2	NNC	ENSG00000205267.5	novel	744	5	NA	NA	960	223	intron_retention	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCAGACGTGGTG	-101202554	False	NA	NA	False	ATTAAA	-22	NA	101202566	101201585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_101202016_101202143
transcript_87136.known	chr7	-	2821	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	18.7077095086953	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	-101216079	True	NA	-11	True	AATAAA	-14	NA	101217581	101205983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
transcript_87138.known	chr7	+	728	5	FSM	ENSG00000106400.12	ENST00000305105.3	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	165.808624624897	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	101206560	True	NA	15	True	AATAAA	-17	NA	101218164	101224190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101218218_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_87143.known	chr7	-	870	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_3	78.1040972036679	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTTCCTCCCTTTCC	-101231864	True	NA	NA	False	NA	NA	NA	101245081	101239471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
transcript_87144.known	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	265.854283395999	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	-101251197	True	NA	-4	True	AATAAA	-21	NA	101252291	101239611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
transcript_87146.known	chr7	-	530	4	FSM	ENSG00000214253.9	ENST00000480497.1	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	302.637663808647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCCCGTCTCTATCCT	-101243637	False	13217	NA	False	NA	NA	NA	101244731	101239731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244556
transcript_87147.known	chr7	-	631	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	304.521847419123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCGTTGAGGGGAGG	-101231831	True	NA	1	True	AATAAA	-26	NA	101245048	101239606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
transcript_87148.known	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	248.476692401253	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	-101231858	True	NA	NA	False	NA	NA	NA	101245075	101239457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
transcript_87149.known	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	284.267870541541	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-101251222	True	NA	14	True	AATAAA	-39	NA	101252316	101239593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
transcript_87150.known	chr7	-	345	2	FSM	ENSG00000214252.4	ENST00000454506.2	345	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGAACAACAGACCGCG	-101289543	True	NA	NA	False	NA	NA	NA	101289771	101287481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101287744_101289688
transcript_87155.nnic	chr7	+	1063	3	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	-26	-16	multi-exon	FALSE	canonical	2	27	junction_1	484	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	101289357	True	NA	14	True	ATTAAA	-16	NA	101299586	101304562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_101299867_101302798_101303029_101304009
transcript_87156.known	chr7	+	867	2	FSM	ENSG00000232301.3	ENST00000429254.3	887	2	20	0	20	0	multi-exon	FALSE	canonical	3	765	junction_1	0	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCGATTTTGCAAGAT	101289348	True	NA	12	True	AATAAA	-17	NA	101299577	101301346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101299867_101300768
transcript_87157.known	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	18.6731759484026	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-101319978	True	NA	-6	True	ATTAAA	-26	NA	101321812	101310913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
transcript_87160.known	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	75.4733212613717	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	-101319930	True	NA	-25	True	NA	NA	NA	101321764	101314752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
transcript_87161.known	chr7	-	875	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	81.1842896679455	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTATTGGCTTGAAT	-101319943	True	NA	-67	True	NA	NA	NA	101321777	101314794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
transcript_87164.known	chr7	+	1194	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	101297684	True	NA	10	True	ATTAAA	-17	NA	101308295	101311343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101308549_101309613_101309695_101310483
transcript_87170.known	chr7	-	567	3	FSM	ENSG00000128581.17	ENST00000495166.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACATCCAGCTCCTG	-101319989	True	NA	NA	False	NA	NA	NA	101321823	101315071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101321670
transcript_87172.known	chr7	-	923	3	FSM	ENSG00000128581.17	ENST00000485695.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	68.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCAGGAGGCTGAG	-101319951	True	NA	NA	False	AATACA	-38	NA	101321785	101315824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101316543_101318123_101318214_101321670
transcript_87173.known	chr7	+	4596	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	101297658	True	NA	NA	False	ATTAAA	-2	NA	101308269	101314800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101308549_101310483
transcript_87174.known	chr7	+	2978	13	FSM	ENSG00000160963.14	ENST00000313669.12	2978	13	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_2	48.7125212057662	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357067	True	NA	19	True	AATAAA	-15	NA	101362874	101559024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101363191_101419976_101420100_101447683_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_87175.known	chr7	+	2970	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	48.7125212057662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357069	True	NA	19	True	AATAAA	-15	NA	101362876	101559024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_87176.known	chr7	+	3026	23	FSM	ENSG00000257923.12	ENST00000437600.9	3026	23	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	38.1300785805902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	101815620	False	NA	13	True	AATAAA	-16	NA	101815903	102283958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178474_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_87178.nic	chr7	+	1090	9	NIC	ENSG00000257923.12	novel	13651	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	72.3286768854512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATGCAGTCTCAGC	101815615	False	NA	NA	False	TATAAA	-38	NA	101815898	102125778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102125527
transcript_87179.known	chr7	+	559	2	FSM	ENSG00000257923.12	ENST00000607092.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGGTGGAAGGTC	101812597	True	NA	NA	False	NA	NA	NA	101816007	101916587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101816094_101916114
transcript_87183.known	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	23.1948270094864	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	102393832	True	NA	7	True	AATAAA	-22	NA	102396362	102426666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_87191.known	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	55	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-102463566	True	NA	NA	False	NA	NA	NA	102464863	102456833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102457982_102459603_102459711_102464713
transcript_87192.known	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	26.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-102463566	True	NA	-20	True	AATAAA	-20	NA	102464863	102456237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102457982_102459603_102459802_102464713
transcript_87197.known	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2609	junction_3	82.8908251188809	988	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	-102468978	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
transcript_87211.known	chr7	-	1598	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	571.380113737781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572371	True	NA	-19	True	AATAAA	-16	NA	102572539	102537918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
transcript_87214.known	chr7	-	1598	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	249.234797680821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAATGCCCCCAAAA	-102670447	True	NA	-25	True	NA	NA	NA	102671641	102637048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_87215.nic	chr7	-	1493	8	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	175.652950967735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572412	True	NA	-19	True	AATAAA	-16	NA	102572580	102537918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572442
transcript_87216.known	chr7	-	1532	8	FSM	ENSG00000168255.20	ENST00000486319.5	1532	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	147.812622697019	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	-102572481	True	NA	-20	True	AATAAA	-15	NA	102572649	102537919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572471
transcript_87220.nnic	chr7	-	1400	7	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	-115	24	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	190.63898400438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670562	True	NA	-1	True	AATAAA	-16	NA	102671756	102637024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102666076_102666164_102668914_102669005_102671551
transcript_87229.known	chr7	-	348	4	FSM	ENSG00000285437.2	ENST00000621093.4	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	809.478158376672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	-102572353	False	NA	NA	False	NA	NA	NA	102572521	102567050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102567084_102568009_102568185_102569834_102569925_102572471
transcript_87231.known	chr7	-	348	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	382.23669223256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	-102670407	False	NA	NA	False	NA	NA	NA	102671601	102666130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
transcript_87232.known	chr7	-	4630	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	125.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAATTAGCTTTA	-102572415	True	NA	NA	False	AATAAA	-34	NA	102572583	102562655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102567084_102569834_102569925_102572471
transcript_87235.nnic	chr7	-	2060	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-39	1057	combination_of_known_splicesites	FALSE	canonical	3	324	junction_1	117.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAGTATCATGCT	-102670474	True	NA	NA	False	NA	NA	NA	102671668	102664310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_87236.nnic	chr7	-	995	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-18	13	combination_of_known_splicesites	FALSE	canonical	3	324	junction_1	117.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCGGGCTTGATGGCT	-102670453	True	NA	NA	False	AATAAA	-4	NA	102671647	102665354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_87237.nnic	chr7	-	413	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-127	85	combination_of_known_splicesites	FALSE	canonical	3	324	junction_1	117.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	-102670562	True	NA	NA	False	ATTAAA	-18	NA	102671756	102666045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_87239.known	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_2	244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	-102670435	True	NA	NA	False	NA	NA	NA	102671629	102665367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102667265_102668914_102669005_102671551
transcript_87240.known	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	653	junction_2	691.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	-102572412	True	NA	NA	False	NA	NA	NA	102572580	102566287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_102568185_102569834_102569925_102572471
transcript_87242.known	chr7	+	1958	8	FSM	ENSG00000222011.9	ENST00000420217.1	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	3.99489470117416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	102748520	True	NA	14	True	AATAAA	-18	NA	102749009	102809224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_87247.known	chr7	+	1446	7	FSM	ENSG00000222011.9	ENST00000409231.7	1446	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.8192563486863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCACATGCCTTCTCAT	102748538	True	NA	NA	False	NA	NA	NA	102749027	102808840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102749418_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_87252.known	chr7	+	2116	4	FSM	ENSG00000128606.13	ENST00000339431.9	2116	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCCTGATACATCCAA	102912930	True	NA	20	True	AATAAA	-32	NA	102912999	102945111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102944209
transcript_87254.nic	chr7	+	1858	4	NIC	ENSG00000128606.13	novel	801	2	NA	NA	298	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTTTCGATAGCTGTT	102933409	True	NA	12	True	AATAAA	-25	NA	102933527	102944949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_102933578_102933773_102934686_102939429_102939586_102944209
transcript_87256.known	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.89711431702997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	NA	False	NA	NA	False	NA	NA	NA	103149560	103103086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
transcript_87258.nic	chr7	-	2095	2	ISM	ENSG00000161048.12	ENST00000427257.5	1822	5	187	23706	-138	-3	5prime_fragment	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATACAAAAAAT	-103149352	False	NA	NA	False	NA	NA	NA	103149373	103126792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_103128793_103149278
transcript_87261.known	chr7	-	2291	17	FSM	ENSG00000105821.15	ENST00000379263.8	2291	17	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_11	41.4366987102013	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTAGGAGCATTTTA	-103337919	True	NA	-25	True	TATAAA	-18	NA	103344767	103312288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_87268.known	chr7	-	1846	15	FSM	ENSG00000105821.15	ENST00000249270.11	1846	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	97.6813070914903	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTCCAACATAATTT	-103344647	False	NA	38	True	NA	NA	NA	103344666	103312473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_8727.known	chr1	+	779	4	FSM	ENSG00000143228.13	ENST00000487578.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	56.5685424949238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTGAGTTCTTAAAA	163317377	True	NA	NA	False	NA	NA	NA	163321985	163328561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227
transcript_87274.known	chr7	+	1509	13	FSM	ENSG00000105819.14	ENST00000453466.1	1509	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	197.799140544139	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAGCTAGAGAAAAATA	103289859	True	NA	47	True	ATTAAA	-41	NA	103297456	103312312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300186_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_87281.known	chr7	+	3859	13	FSM	ENSG00000161057.13	ENST00000679205.1	3859	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	270.785123914393	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	103344206	False	NA	NA	False	CATAAA	-19	NA	103344265	103370346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103344343_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_87282.known	chr7	+	3988	13	FSM	ENSG00000161057.13	ENST00000679341.1	3988	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	271.322174217704	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	103344260	False	NA	NA	False	CATAAA	-19	NA	103344319	103370346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103344526_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_87288.known	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	TRUE	canonical	3	651	junction_1	45.7331461978839	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	103289837	True	NA	25	True	ATTAAA	-45	NA	103297434	103312415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
transcript_8730.known	chr1	+	680	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	768.979283783958	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610113	True	NA	35	True	AATAAA	-32	NA	165631239	165655620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_87307.known	chr7	+	2479	9	FSM	ENSG00000161057.13	ENST00000679250.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.681495232474	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	103338982	True	NA	-11	True	ATTAAA	-4	NA	103347635	103369375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103347782_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_87310.nic	chr7	-	1017	8	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-196	10263	-32	0	5prime_fragment	FALSE	canonical	3	267	junction_2	33.7922826596094	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAATGAACAGAAT	-103344843	False	NA	NA	False	AAGAAA	-2	NA	103344862	103322736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_87313.known	chr7	+	1323	10	FSM	ENSG00000105819.14	ENST00000443722.5	1323	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	283.921350611984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATACTGTATCATACT	103289856	True	NA	-25	True	AATAAA	-32	NA	103297453	103312365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103312206
transcript_87314.known	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	119.369602666744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-103337930	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
transcript_87319.known	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	18.1567794240403	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-104205186	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_87327.known	chr7	-	1409	9	FSM	ENSG00000164815.11	ENST00000447452.6	1409	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_7	13.3878442999611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGCAAATATTGAAAAAAA	-104205130	True	NA	NA	False	ATTAAA	-25	NA	104207957	104167993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_87330.known	chr7	-	1214	7	FSM	ENSG00000164815.11	ENST00000485726.1	1214	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.1732670679289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATATATCTGAGGCTGG	-104205182	True	NA	NA	False	NA	NA	NA	104208009	104187542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104187968_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_87333.known	chr7	+	2523	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.022948212414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	105010007	True	NA	NA	False	AATAAA	-16	NA	105014217	105091609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_87336.nic	chr7	+	2042	14	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-54	1477	0	0	5prime_fragment	FALSE	canonical	3	22	junction_1	24.3500118464669	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009953	True	NA	-2	True	AAAAAG	-9	NA	105014163	105090132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_8734.known	chr1	+	1158	6	FSM	ENSG00000143198.13	ENST00000367889.8	1158	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	181.666287461378	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCTGTTGCTTAAA	165610107	True	NA	NA	False	AATAAA	-23	NA	165631233	165656136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_87340.nic	chr7	+	1968	13	NIC	ENSG00000005483.22	novel	5524	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	15.8499912372917	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009953	True	NA	-2	True	AAAAAG	-9	NA	105014163	105090132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_87343.known	chr7	+	1500	10	FSM	ENSG00000005483.22	ENST00000478990.5	1500	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.4785965459855	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009995	True	NA	-2	True	AAAAAG	-9	NA	105014205	105090132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105040838_105041024_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_87345.known	chr7	+	1133	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.4152683776425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	105009997	True	NA	NA	False	GATAAA	-14	NA	105014207	105074777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_87346.nic	chr7	+	674	3	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-54	50543	0	210	5prime_fragment	FALSE	canonical	3	22	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	105009953	True	NA	NA	False	TTTAAA	-31	NA	105014163	105041066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_105014536_105038125_105038200_105040838
transcript_87347.nic	chr7	+	600	2	ISM	ENSG00000005483.22	ENST00000495267.5	1133	7	-44	33711	0	210	5prime_fragment	FALSE	canonical	3	57	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	105009953	True	NA	NA	False	TTTAAA	-31	NA	105014163	105041066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_105014536_105040838
transcript_87349.known	chr7	-	3679	16	FSM	ENSG00000135250.17	ENST00000393651.8	3679	16	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_14	35.0551311824991	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-105384372	True	NA	-1	True	ATTAAA	-26	NA	105388921	105116373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_87355.known	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	32.3639030746018	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	-105515647	True	NA	-3	True	AATAAA	-28	NA	105522271	105456502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_87356.known	chr7	-	3480	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	77.5217818852654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGATAAGAATCTT	-105515634	True	NA	-11	True	AATAAA	-20	NA	105522258	105456510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_87361.nic	chr7	-	1556	10	ISM	ENSG00000091127.14	ENST00000356362.6	3480	16	-13	15530	0	-1755	5prime_fragment	FALSE	canonical	3	111	junction_9	98.6975677336742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGTTTCAGTATTTT	-105515647	True	NA	0	True	AATAAA	-19	NA	105522271	105472040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_87362.nic	chr7	-	1582	10	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	-2	15538	-2	-1755	5prime_fragment	FALSE	canonical	3	347	junction_5	34.8906581292379	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGTTTCAGTATTTT	-105515649	True	NA	0	True	AATAAA	-19	NA	105522273	105472040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_87364.nnic	chr7	-	1971	10	NNC	ENSG00000091127.14	novel	395	5	NA	NA	-2	-8613	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	127.126164609789	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCAAATTTATCCCAC	-105515649	True	NA	NA	False	AATAAA	-16	NA	105522273	105478898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_105479441_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_87371.known	chr7	+	2860	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_5	26.3009466734254	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	105528905	True	NA	15	True	AATAAA	-16	NA	105532200	105567677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_87377.nnic	chr7	-	769	5	NNC	ENSG00000185055.11	novel	737	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	14.0712472794703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-105581198	True	NA	-15	True	AATAAA	-1	NA	105581487	105565123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_105565448_105567428_105567491_105569202_105569291_105569406_105569572_105581357
transcript_87378.known	chr7	-	737	5	FSM	ENSG00000185055.11	ENST00000480514.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	6.53834841531101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-105581204	True	NA	-15	True	AATAAA	-1	NA	105581493	105565123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105565448_105567466_105567491_105569202_105569291_105569406_105569572_105581357
transcript_87379.known	chr7	-	1550	4	FSM	ENSG00000185055.11	ENST00000486180.5	1550	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTCAAATGTTTAAGG	-105581197	True	NA	NA	False	NA	NA	NA	105581486	105566322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105567491_105569202_105569291_105569406_105569572_105581357
transcript_87383.nic	chr7	-	2546	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38778	0	-14974	0	3prime_fragment	FALSE	canonical	3	88	junction_1	34.1792659696229	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	-105639066	True	NA	-3	True	ATTAAA	-16	NA	105639240	105613473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
transcript_87384.nic	chr7	-	1881	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38748	6078	-15004	681	internal_fragment	FALSE	canonical	3	120	junction_1	25.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-105639151	False	NA	NA	False	NA	NA	NA	105639270	105619551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105620322_105624074_105624268_105638352
transcript_87385.nic	chr7	-	1414	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38672	6621	-15080	138	internal_fragment	FALSE	canonical	3	120	junction_1	25.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGAAGTCAGGATGC	-105639227	True	NA	NA	False	AATAAA	-31	NA	105639346	105620094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105620322_105624074_105624268_105638352
transcript_87386.known	chr7	-	410	3	FSM	ENSG00000146776.15	ENST00000464874.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	28	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGCCGTATGTAACT	-105875689	True	NA	-1	True	AATAAA	-21	NA	105876574	105875090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105875235_105875811_105875881_105876377
transcript_87394.known	chr7	-	1193	6	FSM	ENSG00000008282.9	ENST00000470347.1	1193	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	247.073268485281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAAACCTTTATTT	-106105080	True	NA	NA	False	AAAACA	-22	NA	106112221	106091456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106091940_106092563_106092670_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_87395.known	chr7	-	2127	6	FSM	ENSG00000008282.9	ENST00000011473.6	2127	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	210.661434534183	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	106112576	106090504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139_106112212_106112478
transcript_87397.known	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	22.4763764873255	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	-106105171	True	NA	NA	False	AATAAA	-15	NA	106112312	106090504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_87400.known	chr7	-	4489	11	FSM	ENSG00000105835.13	ENST00000681550.1	4489	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	134.991258976276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTGTTAAATTTGTGT	-106284595	False	NA	-11	True	AATAAA	-27	NA	106284632	106248297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284347
transcript_87401.known	chr7	-	4360	11	FSM	ENSG00000105835.13	ENST00000222553.8	4360	11	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_6	38.717050507496	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTGTTAAATTTGTGT	-106279983	True	NA	-11	True	AATAAA	-27	NA	106284983	106248297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87406.known	chr7	-	2464	10	FSM	ENSG00000105835.13	ENST00000679951.1	2464	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	173.622052988526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	-106284936	False	NA	-21	True	ATTAAA	-18	NA	106284973	106250042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87408.known	chr7	-	1495	8	FSM	ENSG00000105835.13	ENST00000354289.9	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_3	44.3911188028802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTTGGTA	-106285155	False	NA	NA	False	TATAAA	-17	NA	106285192	106261489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87409.known	chr7	+	847	1	FSM	ENSG00000273320.1	ENST00000609281.1	847	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGAAGTCAGTATATA	106285457	False	NA	NA	False	AATAAA	-21	NA	106285479	106286326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_106285500_106286300
transcript_87410.known	chr7	-	2598	11	FSM	ENSG00000105835.13	ENST00000681878.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	169.118567874731	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTATTAATTTTAAA	-106284934	False	NA	-17	True	ATTAAA	-22	NA	106284971	106250038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275041_106277022_106277180_106284827
transcript_87411.known	chr7	-	2265	11	FSM	ENSG00000105835.13	ENST00000681936.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	203.016255506794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAATGTCTAGGCACT	-106284507	False	5000	NA	False	ATTAAA	-16	NA	106284544	106250430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284347
transcript_87412.known	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_5	21.679714020254	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	107041536	True	NA	11	True	ATTAAA	-16	NA	107044704	107161811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
transcript_87413.known	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_15	17.3386961876471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-107561521	True	NA	-20	True	AATAAA	-30	NA	107563920	107201371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_87418.known	chr7	-	4532	21	FSM	ENSG00000164597.15	ENST00000347053.8	4532	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	37.642097444218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATCAGTATCTTATGGT	-107563924	False	NA	NA	False	ATTAAA	-17	NA	107564040	107201554	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_8742.known	chr1	+	1002	2	FSM	ENSG00000143198.13	ENST00000461308.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGCAACTACAGCGCAG	165610099	True	NA	NA	False	AATGAA	-35	NA	165631225	165650774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165649840
transcript_87421.known	chr7	+	2704	11	FSM	ENSG00000105856.14	ENST00000468410.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	32.9842386603056	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	107165508	True	NA	14	True	AATAAA	-6	NA	107168960	107202508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_87422.known	chr7	+	2834	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	48.7677147301368	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	107165550	True	NA	28	True	AATAAA	-20	NA	107169002	107202522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_87424.nic	chr7	+	1636	10	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	3	2177	3	0	5prime_fragment	FALSE	canonical	3	80	junction_1	34.3223643031482	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	107165511	True	NA	8	True	AATAAA	-16	NA	107168963	107200331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159
transcript_87426.nnic	chr7	+	2558	10	NIC	ENSG00000105856.14	novel	2704	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	60.4601695231285	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	107165511	True	NA	28	True	AATAAA	-20	NA	107168963	107202522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_8743.known	chr1	+	720	6	FSM	ENSG00000143198.13	ENST00000495447.5	720	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	656.559700255811	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGACTCTTACCAC	165610112	True	NA	32	True	AATAAA	-29	NA	165631238	165655617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165649754_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_87435.known	chr7	+	1157	9	FSM	ENSG00000075790.12	ENST00000445771.6	1157	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	73.1247863244741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTCCAAAATTAGAAGTT	107577133	True	NA	13	True	AATAAA	-23	NA	107580264	107618664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107613653_107613733_107618327
transcript_87437.known	chr7	+	2266	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	14.549002350256	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	107562706	True	NA	113	True	AATGAA	-16	NA	107563970	107578523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_87439.nic	chr7	+	1736	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	22.9595918331066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562684	True	NA	NA	False	AATAAA	-2	NA	107563948	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
transcript_8744.known	chr1	+	716	7	FSM	ENSG00000143198.13	ENST00000367884.6	716	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	774.582772996032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610128	True	NA	35	True	AATAAA	-32	NA	165631254	165655620	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631293_165635726_165635823_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_87441.nic	chr7	+	1521	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	21.826776291182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562687	True	NA	NA	False	AATAAA	-2	NA	107563951	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_87442.nic	chr7	+	1583	8	NIC	ENSG00000105865.11	novel	1676	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	27.1383454897009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562687	True	NA	NA	False	AATAAA	-2	NA	107563951	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
transcript_87443.nic	chr7	+	1704	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.804542046215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562692	True	NA	NA	False	AATAAA	-2	NA	107563956	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_87444.known	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	20.3098448029119	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	107577114	True	NA	11	True	AATAAA	-20	NA	107580245	107620478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_87447.nic	chr7	+	1030	8	NIC	ENSG00000075790.12	novel	2911	8	NA	NA	-29	-83	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	57.5262140777789	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTGTGATTATTTGT	107577085	True	NA	7	True	AATAAA	-18	NA	107580216	107621870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107621629
transcript_87451.nnic	chr7	+	1427	7	NIC	ENSG00000105865.11	novel	1375	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	26.0362994469047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562692	True	NA	NA	False	AATAAA	-2	NA	107563956	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564060_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_87452.nic	chr7	+	1577	7	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	20.9920619917784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562692	True	NA	NA	False	AATAAA	-2	NA	107563956	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564210_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_87456.known	chr7	+	942	7	FSM	ENSG00000075790.12	ENST00000465919.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	63.5437294747134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGGTGGCTGTTTAC	107577114	True	NA	-36	True	AATATA	-41	NA	107580245	107618615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107580302_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_8746.known	chr1	-	2696	11	FSM	ENSG00000143149.13	ENST00000354775.5	2395	11	-301	0	-301	0	multi-exon	FALSE	canonical	3	334	junction_10	39.8232344241399	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATCGTGTTTTGAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	165698863	165662215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165663145_165665017_165665131_165667308_165667451_165668925_165669014_165669261_165669451_165679441_165679583_165680486_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698377
transcript_87462.nic	chr7	+	992	6	ISM	ENSG00000075790.12	ENST00000445771.6	1157	9	-48	17855	-29	304	5prime_fragment	FALSE	canonical	3	150	junction_1	18.994736112934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTTTTCCATCATCGT	107577085	True	NA	NA	False	TATAAA	-20	NA	107580216	107600809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396
transcript_87467.known	chr7	+	1375	7	FSM	ENSG00000105865.11	ENST00000431839.5	1375	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	28.9865869364129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562715	True	NA	NA	False	AATAAA	-2	NA	107563979	107577909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576365_107576593_107577312
transcript_87468.known	chr7	+	573	7	FSM	ENSG00000105879.12	ENST00000432748.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	142.809896949289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTCTTCATGTGT	107740663	True	NA	NA	False	NA	NA	NA	107744141	107758180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107744177_107748879_107749048_107752544_107752618_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_87471.known	chr7	+	3987	6	FSM	ENSG00000105879.12	ENST00000440859.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	59.76286472384	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	107740663	True	NA	NA	False	AATAAA	-19	NA	107744141	107761667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_87475.known	chr7	-	553	2	FSM	ENSG00000241764.5	ENST00000609979.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAAGGAGCACAATTA	-107743930	True	NA	NA	False	NA	NA	NA	107744050	107742968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107743404_107743932
transcript_87476.known	chr7	-	772	2	FSM	ENSG00000241764.5	ENST00000663315.2	776	2	1	3	1	2	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGTAGTTGTACGG	-107743590	False	120	55	True	AATAAA	-20	NA	107743606	107742753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107743404_107743484
transcript_87485.known	chr7	+	3537	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_10	106.790343733846	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	107877031	True	NA	23	True	AATAAA	-33	NA	107891182	107921198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_87490.known	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	358.453652280645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	107877021	True	NA	-19	True	NA	NA	NA	107891172	107919713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_8750.known	chr1	-	1912	7	FSM	ENSG00000143183.18	ENST00000367881.11	1912	7	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_4	38.1400926410341	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGAGTTGAATTATTA	-165758350	True	NA	NA	False	AATAAA	-22	NA	165768868	165726794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
transcript_87501.known	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	34.0052937055394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-108524426	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
transcript_87506.known	chr7	-	3366	10	FSM	ENSG00000135241.17	ENST00000453144.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	41.7239606088503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTGTTAAAAGGCTAAT	-108526283	True	NA	-17	True	AATAAA	-13	NA	108526315	108471626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515448_108526028
transcript_87507.known	chr7	-	3462	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	19.9654021735255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	-108526286	True	NA	-51	True	TATAAA	-27	NA	108526318	108471660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_8751.known	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	218.607461497137	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-165758358	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
transcript_87511.known	chr7	-	4268	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.634890269141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCATGGCTTCTTTC	-108524362	True	NA	NA	False	AATACA	-14	NA	108526071	108470421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_87514.known	chr7	-	3384	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCTGAAAATCCAAAATG	-108566895	True	NA	95	True	AATAAA	-18	NA	108569706	108562131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108565106_108565829_108566023_108569489
transcript_87516.known	chr7	-	1051	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACTAGCATAATAAGC	-108566877	True	NA	NA	False	AATAAA	-38	NA	108569688	108565170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108566023_108569489
transcript_87517.known	chr7	+	2409	3	FSM	ENSG00000128590.5	ENST00000249356.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	11	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGCTGAGGATTATCT	108567308	True	NA	4	True	AATAAA	-18	NA	108569873	108574850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_108570104_108571716_108571944_108572898
transcript_87525.nnic	chr7	-	658	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-132	-11821	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	109597298	109533801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109597040
transcript_87533.known	chr7	-	1205	7	FSM	ENSG00000184903.10	ENST00000331762.7	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	12.2667119564381	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	-111560557	True	NA	-8	True	AATAAA	-12	NA	111562517	110663053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850_111561924_111562463
transcript_87535.known	chr7	+	1736	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.481557573502	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	112204223	True	NA	76	True	TATAAA	-18	NA	112206694	112343094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
transcript_87542.known	chr7	+	1075	7	FSM	ENSG00000198839.10	ENST00000450657.1	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	12.8797860575744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTTGGATATCCAC	112204229	True	NA	NA	False	NA	NA	NA	112206700	112330474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112206808_112286872_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083
transcript_87548.known	chr7	+	3269	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	36.2712462673276	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	112445755	True	NA	23	True	AATAAA	-35	NA	112450459	112477203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_87553.known	chr7	+	1938	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	8.83176086632785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTAATAAATGTATT	112445753	True	NA	NA	False	NA	NA	NA	112450457	112458336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
transcript_87556.known	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.3003496460751	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-112788937	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
transcript_87558.known	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.40254569624358	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-112938690	True	NA	-1	True	ATTAAA	-20	NA	112939875	112819146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
transcript_87559.known	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	170.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-113116065	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_113117608_113118067_113118162_113118439
transcript_87560.known	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	37	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	-113116059	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_113117608_113118067_113118162_113118527
transcript_87562.known	chr7	+	816	5	FSM	ENSG00000225535.7	ENST00000669990.1	816	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	115030600	True	NA	NA	False	AATAAA	-16	NA	115030647	115125935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_115030769_115031786_115031826_115118732_115118826_115122177_115122248_115125442
transcript_87563.known	chr7	+	2953	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGTATTGCTTTT	116499397	True	NA	8	True	AATAAA	-16	NA	116499737	116508541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116499932_116500259_116500448_116505970
transcript_87565.nic	chr7	+	2654	6	NIC	ENSG00000135269.18	novel	2736	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	152.950187969809	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205311	True	NA	NA	False	AATAAA	-17	NA	116210534	116258783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_116210735_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_87567.known	chr7	+	2736	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	19.9888858007533	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205315	True	NA	NA	False	AATAAA	-17	NA	116210538	116258783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_87568.known	chr7	+	961	2	FSM	ENSG00000135269.18	ENST00000496871.1	961	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAAAAATGTTCCTG	116205337	True	NA	NA	False	ATTAAA	-25	NA	116210560	116249806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116210735_116249019
transcript_87569.known	chr7	+	2456	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	68.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	116524642	True	NA	16	True	AATAAA	-18	NA	116525035	116561179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116525093_116526524_116526690_116558945
transcript_87572.known	chr7	+	1653	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	76.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	116524615	True	NA	NA	False	AAAAAG	-8	NA	116525008	116559636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116525806_116526524_116526690_116558945
transcript_87575.known	chr7	+	845	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	75.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	116526070	False	NA	87	True	TTTAAA	-21	NA	116526276	116559513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116526389_116526524_116526690_116558945
transcript_87578.nnic	chr7	+	737	3	NIC	ENSG00000105974.13	novel	845	3	NA	NA	3	-72	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	78.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTCTTCTGAGCTAT	116526073	False	NA	15	True	AATAAA	-29	NA	116526279	116559441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_116526389_116526557_116526690_116558945
transcript_87579.known	chr7	+	2628	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	116525089	True	NA	13	True	AATAAA	-15	NA	116526292	116561176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116526690_116558945
transcript_87582.known	chr7	+	2652	3	FSM	ENSG00000105974.13	ENST00000405348.6	2652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	116525324	True	NA	16	True	AATAAA	-18	NA	116525530	116561179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116525784_116526524_116526690_116558945
transcript_87583.nnic	chr7	+	1914	12	NNC	ENSG00000105976.16	novel	741	6	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	9.21461290066441	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCATTCCTAGTTGTT	116723661	True	NA	31	True	AATAAA	-43	NA	116724053	116769909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_116724165_116724692_116724848_116731667_116731860_116739949_116740085_116740851_116741026_116755354_116755516_116757436_116757540_116757637_116757775_116758458_116758621_116759390_116759491_116763049_116763269_116769644
transcript_87584.nnic	chr7	+	1765	11	NNC	ENSG00000105976.16	novel	688	4	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.1650979523616	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCATTCCTAGTTGTT	116723655	True	NA	31	True	AATAAA	-43	NA	116724047	116769909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_116724165_116731667_116731860_116739949_116740085_116740851_116741026_116755354_116755516_116757436_116757540_116757637_116757775_116758458_116758621_116759390_116759491_116763049_116763269_116769644
transcript_87592.known	chr7	+	1214	10	FSM	ENSG00000198898.15	ENST00000426421.5	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	468.446710936958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGTCTTTTGGTTTA	116847619	True	NA	NA	False	NA	NA	NA	116862599	116918188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910212_116910312_116912068_116912141_116916059_116916123_116917726
transcript_87596.known	chr7	+	5068	10	FSM	ENSG00000198898.15	ENST00000361183.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	82.062306951622	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGTTCATTGCAAATG	116847606	True	NA	NA	False	ATTAAA	-18	NA	116862586	116922049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910232_116910312_116912068_116912141_116916059_116916123_116917726
transcript_8760.known	chr1	+	4838	8	FSM	ENSG00000143179.16	ENST00000642653.1	4838	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	212.5010444152	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGGCTCTCGCCTTC	165825713	True	NA	9	True	AATAAA	-6	NA	165827804	165911608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165827933_165885141_165885380_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_87606.known	chr7	+	809	5	FSM	ENSG00000198898.15	ENST00000490693.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	84.1468210926592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTCTGTATTTTA	116847619	True	NA	NA	False	AATAAA	-18	NA	116862599	116904754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176
transcript_87608.known	chr7	+	621	2	FSM	ENSG00000198898.15	ENST00000461878.5	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCATGCT	116847622	True	NA	NA	False	NA	NA	NA	116862602	116888699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126
transcript_8761.known	chr1	+	4801	7	FSM	ENSG00000143179.16	ENST00000367879.9	4801	7	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	32.170120712653	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	165819757	True	NA	19	True	AATAAA	-16	NA	165827613	165911618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165827933_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_87611.nic	chr7	+	647	4	NIC	ENSG00000128534.8	novel	1920	3	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	329.940398658101	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177714	True	NA	29	True	ATTAAA	-29	NA	118184062	118192164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
transcript_87612.known	chr7	+	12384	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	64.3238334954903	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTCCATGTTTTT	118177815	True	NA	NA	False	AATAAA	-18	NA	118184163	118204035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
transcript_87614.known	chr7	+	1920	3	FSM	ENSG00000128534.8	ENST00000422760.1	1920	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	33.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177807	True	NA	29	True	ATTAAA	-29	NA	118184155	118192164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_118185695_118188277_118188406_118191911
transcript_87616.nic	chr7	+	1119	7	NIC	ENSG00000106013.15	novel	744	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	2.73353657780945	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAGGAAAACATTATAAA	118214509	True	NA	10	True	AATAAA	-25	NA	118214652	118242692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_118214805_118234430_118234546_118234700_118234875_118236040_118236148_118236789_118236927_118239908_118239999_118242348
transcript_87622.known	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	20.735457160947	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-120856536	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_87629.nnic	chr7	-	751	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-34	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	65.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	-120858167	False	NA	-14	True	AATAAA	-19	NA	120858178	120855125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_120855382_120856697_120856834_120857819
transcript_87631.known	chr7	+	3749	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	29.1728958322562	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	120949748	True	NA	12	True	AATAAA	-22	NA	120950776	120977216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_87633.known	chr7	+	1718	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	53.9926846896874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	120949756	True	NA	NA	False	TATAAA	-22	NA	120950784	120975290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_87635.known	chr7	+	1222	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	78.8257572117135	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATTCATCTC	NA	False	NA	9	True	CATAAA	-20	NA	120950762	120956980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
transcript_87637.known	chr7	+	1723	4	FSM	ENSG00000071243.16	ENST00000445699.5	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	13.589211407093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTATTCATC	120949766	True	NA	7	True	CATAAA	-18	NA	120950794	120956978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558
transcript_8764.known	chr1	+	473	3	FSM	ENSG00000229588.3	ENST00000653824.2	2342	3	59	1810	59	-1810	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTCTCTGGTTCTTCT	166165880	True	NA	NA	False	ATTAAA	-17	NA	166165910	166339090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_166166055_166335327_166335466_166338899
transcript_87640.known	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_7	196.126061753061	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	-121390588	True	NA	-28	True	AATAAA	-28	NA	121396308	121348877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
transcript_87645.known	chr7	+	5633	31	FSM	ENSG00000106278.12	ENST00000651065.1	5633	31	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_23	166.487436963474	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAACACCTTACCAAAC	121865176	True	NA	-70	True	AATAGA	-31	NA	121873088	122061957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_87647.known	chr7	+	8103	30	FSM	ENSG00000106278.12	ENST00000393386.7	8103	30	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	129.828634881509	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	121865248	True	NA	9	True	AATAAA	-19	NA	121873160	122062036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_8765.known	chr1	+	5751	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	21.2320512433443	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCATACCTTAGTTG	166836634	True	NA	NA	False	AAAAAG	-21	NA	166839474	166856359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
transcript_87650.known	chr7	-	5774	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_23	1377.73664149145	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	-122099915	True	NA	7	True	NA	NA	NA	122144239	122073582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
transcript_87656.known	chr7	-	5728	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	1392.71120406705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	-122099930	True	NA	7	True	NA	NA	NA	122144254	122073582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_87666.known	chr7	-	1816	13	FSM	ENSG00000008311.16	ENST00000473553.5	1816	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	1430.00958378684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAGTGCAGTGGCGC	-122099931	True	NA	72	True	NA	NA	NA	122144255	122076148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122101370_122101439_122101620_122101681_122144160
transcript_87669.nnic	chr7	-	1412	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	-1	-41823	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGCCTGAAGTTTGA	-122099932	True	NA	-6	True	ATTAAA	-23	NA	122144256	122142502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_122143819_122144160
transcript_87670.nnic	chr7	-	821	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	0	-42466	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGCACTTTGGTGTTT	-122099984	True	NA	-8	True	ATTAAA	-16	NA	122144308	122143145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_122143819_122144160
transcript_87680.known	chr7	-	4308	28	FSM	ENSG00000081803.17	ENST00000412584.6	4308	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_21	9.19070921107121	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCGTATCCTTGTTAA	-122884709	True	NA	NA	False	NA	NA	NA	122886458	122319745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122386294_122386310_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
transcript_87681.nnic	chr7	+	583	4	NNC	ENSG00000232524.1	novel	451	3	NA	NA	-16186	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTATTAACAAAATATT	123440413	True	NA	NA	False	AATAAA	-36	NA	123440442	123459856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_123440571_123456624_123456766_123457398_123457549_123459692
transcript_87683.known	chr7	-	5268	6	FSM	ENSG00000128609.16	ENST00000676614.1	5268	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1117.99635062016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTATTATGATCCAAAT	-123542311	True	NA	NA	False	AATAGA	-33	NA	123557804	123537419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_87684.known	chr7	-	5608	5	FSM	ENSG00000128609.16	ENST00000471770.5	5608	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	1112.89296430519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	-123542287	True	NA	NA	False	TATAAA	-18	NA	123557780	123536996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557624
transcript_87686.known	chr7	-	5496	5	FSM	ENSG00000128609.16	ENST00000355749.7	5496	5	0	0	0	0	multi-exon	FALSE	canonical	3	1590	junction_4	435.947244514746	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	-123542325	True	NA	NA	False	TATAAA	-18	NA	123557818	123536996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_87688.known	chr7	-	1504	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	1159.00685454784	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	NA	False	NA	-35	True	AATAAA	-24	NA	123557904	123541029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
transcript_87689.known	chr7	-	1432	4	FSM	ENSG00000128609.16	ENST00000618945.4	1432	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1038.58921405701	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	NA	False	NA	-35	True	AATAAA	-24	NA	123557904	123541029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123557403_123557449_123557774
transcript_87692.known	chr7	-	1803	7	FSM	ENSG00000128609.16	ENST00000467117.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1002.8207577739	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	-123542311	True	NA	-50	True	AATAAA	-9	NA	123557804	123541044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_87693.known	chr7	-	1429	6	FSM	ENSG00000128609.16	ENST00000378795.9	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1168.51290108411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTTAAGGTTAAACAAAAA	-123542311	True	NA	-82	True	AAAACA	-33	NA	123557804	123541076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123544734_123544762_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_87694.known	chr7	-	4363	11	FSM	ENSG00000106299.8	ENST00000223023.5	4363	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	38.2721831099299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATGTGTTTCATGT	-123740890	True	NA	-16	True	AATAAA	-22	NA	123749003	123681942	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123684581_123689041_123689151_123692346_123692868_123694714_123694869_123695822_123695866_123696578_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_87695.nic	chr7	-	891	6	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-64	14707	-64	-14707	5prime_fragment	FALSE	canonical	3	159	junction_2	39.9969998874916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAGAAGGGAAAAGC	-123740954	True	NA	-13	True	AATAGA	-40	NA	123749067	123696649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_87697.known	chr7	-	107	1	FSM	ENSG00000201104.1	ENST00000364234.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	123790711	123790604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123790600_123790700
transcript_87699.known	chr7	-	5298	2	FSM	ENSG00000170775.3	ENST00000303921.3	5298	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAACAACAAAAAAAAAAAA	-124765782	False	NA	NA	False	NA	NA	NA	124765792	124743884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124747344_124763953
transcript_87703.known	chr7	-	3145	19	FSM	ENSG00000128513.16	ENST00000653241.1	3145	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	18.2185802593579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAATTTTATACAAACA	-124927964	True	NA	29	True	TTTAAA	-9	NA	124929801	124823375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929558
transcript_87704.known	chr7	-	2877	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	15.2990760634445	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATAAAAGTGGTCAG	-124929726	True	NA	-46	True	NA	NA	NA	124929944	124823548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_87709.known	chr7	-	3950	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	17.1035923703858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGGTTTATTGTG	-124929765	False	NA	-3	True	AATAAA	-17	NA	124929983	124822386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_87715.known	chr7	-	2476	17	FSM	ENSG00000128513.16	ENST00000654766.1	2476	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.2943596157395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTATTGCTTGTTTCTC	-124927981	True	NA	-99	True	GATAAA	-27	NA	124929818	124823601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_87719.known	chr7	+	667	3	FSM	ENSG00000224897.9	ENST00000659682.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGTTTCCATGAACT	124929801	True	NA	NA	False	AATAAA	-39	NA	124929882	124992289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_124930017_124940279_124940386_124991862
transcript_87726.nnic	chr7	-	1908	3	NNC	ENSG00000219445.2	novel	1918	5	NA	NA	-119	124	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAGGTAGTATCT	-125264362	False	NA	NA	False	ATTAAA	-21	NA	125264410	125229454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_125230842_125262091_125262245_125264042
transcript_8773.known	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_4	45.1595809889999	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-166871558	True	NA	0	True	AATAAA	-16	NA	166876264	166856509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
transcript_87734.nnic	chr7	+	556	5	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	145258	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	135.748618777504	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGTAAGGGCATTTT	125923935	False	NA	23	True	ATTAAA	-19	NA	125923959	126079090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126077243_126077288_126078378_126078408_126078869
transcript_87740.nnic	chr7	+	1036	4	NIC	ENSG00000197462.3	novel	837	5	NA	NA	-8	448	combination_of_known_splicesites	FALSE	canonical	2	58	junction_1	34.7211110933328	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAGAGAGGGAGAATT	125917018	True	NA	14	True	AATAAA	-25	NA	125917862	125934280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_125918119_125920056_125920154_125924211_125924388_125933773
transcript_87741.nnic	chr7	+	512	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	145258	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	87.5709236371678	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGTAAGGGCATTTT	125923935	False	NA	23	True	ATTAAA	-19	NA	125923959	126079090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126078378_126078408_126078869
transcript_87744.nnic	chr7	+	1503	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	146249	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	87.5709236371678	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTTTTGACTATTTC	125923935	False	NA	NA	False	AATAAA	-22	NA	125923959	126080081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126078378_126078408_126078869
transcript_87745.nnic	chr7	+	1649	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	146395	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	87.5709236371678	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAAGGTTTTTTGGTTTT	125923935	False	NA	NA	False	CATAAA	-17	NA	125923959	126080227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126078378_126078408_126078869
transcript_87750.nnic	chr7	+	636	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	-4713	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	126	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAGTACCATTAACT	125923935	False	NA	NA	False	AATAAA	-17	NA	125923959	125929119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_125928745
transcript_87751.nnic	chr7	+	1712	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	-3637	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	126	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCCTTTGTATAGTTC	125923935	False	NA	16	True	AATAAA	-21	NA	125923959	125930195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_125928745
transcript_87753.nnic	chr7	+	379	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	24014	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	140.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAATGTCCTTAATGTT	125923935	False	NA	13	True	AATAAA	-42	NA	125923959	125957846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_125957729
transcript_87754.nnic	chr7	+	469	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	74234	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_2	139.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGTATATTTCATT	125923935	False	NA	17	True	AATATA	-26	NA	125923959	126008066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126007859
transcript_87756.nnic	chr7	+	3279	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	103133	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	149.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAACTTGGATATCCATG	125923935	False	NA	NA	False	AGTAAA	-11	NA	125923959	126036965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126033948
transcript_87757.nnic	chr7	+	1055	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	103133	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_2	152	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAACTTGGATATCCATG	125923935	False	NA	NA	False	AGTAAA	-11	NA	125923959	126036965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126036172
transcript_87758.nnic	chr7	+	3155	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	105233	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_2	152	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGAGACTGATTTATT	125923935	False	NA	22	True	AATAAA	-17	NA	125923959	126039065	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126036172
transcript_87759.nnic	chr7	+	486	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	145261	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	150.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAAGGGCATTTTGGA	125923935	False	NA	26	True	ATTAAA	-22	NA	125923959	126079093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211_125924388_126078869
transcript_8776.known	chr1	+	1737	12	FSM	ENSG00000143194.13	ENST00000367872.9	1737	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.995859195463938	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTAATCTGTTTCTTC	166989268	True	NA	NA	False	AATAAA	-34	NA	166989279	167022214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_166989485_166989736_166989830_166991377_166991478_166992685_166992842_166994027_166994070_167004179_167004305_167005075_167005131_167005255_167005398_167016221_167016285_167017826_167017960_167021084_167021161_167021667
transcript_87761.nnic	chr7	+	646	2	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	-9061	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGAAAATATTTTGGAG	125923935	False	NA	NA	False	AATGAA	-15	NA	125923959	125924771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211
transcript_87762.nnic	chr7	+	721	2	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6089	-8986	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGATAAAAAGAAAAGCCAAA	125923935	False	NA	NA	False	ATTAAA	-12	NA	125923959	125924846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_125924046_125924211
transcript_87763.known	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	86.751599408887	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	127571120	True	NA	22	True	AATAAA	-17	NA	127588410	127591700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
transcript_87764.known	chr7	+	1509	5	FSM	ENSG00000004059.11	ENST00000463733.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_3	96.2366873910361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGTGGTTTGTAC	127571095	True	NA	3	True	NA	NA	NA	127588385	127591681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_127588566_127589082_127589164_127589484_127590138_127590962_127591089_127591212
transcript_87766.known	chr7	-	4128	2	FSM	ENSG00000179562.3	ENST00000321407.3	4128	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGTTCCTTAATAG	-127583805	True	NA	-15	True	ATTAAA	-15	NA	127585596	127580627	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_127583310_127584150
transcript_87767.known	chr7	+	3448	24	FSM	ENSG00000197157.11	ENST00000354725.8	3448	24	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_16	123.55397250183	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTATTGATCACAGTGT	127638562	True	NA	25	True	AATAAA	-20	NA	127652193	128092593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_127652452_127686612_127686763_127694827_127694949_127698874_127698954_127701162_127701324_127702434_127702527_127703164_127703324_127704838_127704946_127707556_127707648_127721286_127721401_127807483_127807574_127844323_127844425_127887901_127888013_127904746_127904820_127929187_127929330_127990946_127991057_128074501_128074691_128081359_128081502_128084723_128084848_128085710_128085781_128086937_128087052_128089488_128089693_128091836_128091882_128091992
transcript_8777.known	chr1	-	682	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCGTGAATTTTATTT	-167220447	True	NA	-4	True	AATAAA	-17	NA	167220512	167219830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_167219800_167220500
transcript_87770.known	chr7	-	15507	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_12	25.9277248053169	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-128338111	True	NA	NA	False	AATAAA	-18	NA	128343908	128297684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_87777.known	chr7	-	2479	15	FSM	ENSG00000106348.18	ENST00000348127.10	2479	15	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_14	86.4446266079492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-128409016	True	NA	-26	True	AATAAA	-3	NA	128409982	128392300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409755
transcript_87778.nic	chr7	-	2380	14	ISM	ENSG00000106348.18	ENST00000354269.9	2580	16	4012	0	-22	0	3prime_fragment	FALSE	canonical	1	63	junction_10	63.1330894400751	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	-128402959	True	NA	-3	True	AATAAA	-26	NA	128405970	128392277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_87785.nic	chr7	+	1315	9	NIC	ENSG00000165055.16	novel	5841	9	NA	NA	5	103	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	152.546714156681	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGCACTGTTCCCCCT	128471274	True	NA	16	True	AATAAA	-28	NA	128476733	128502935	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761_128501833_128502613
transcript_87792.known	chr7	+	5841	9	FSM	ENSG00000165055.16	ENST00000262432.13	5841	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	129.181981618955	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	128471288	True	NA	6	True	AATAAA	-18	NA	128476747	128506602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_87798.known	chr7	+	5743	8	FSM	ENSG00000165055.16	ENST00000480046.5	5743	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	142.106312603039	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	128471294	True	NA	6	True	AATAAA	-18	NA	128476753	128506602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_8780.known	chr1	+	13843	16	FSM	ENSG00000143190.23	ENST00000367866.7	13843	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.8791339524594	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGAGTTTCTTTGA	167217790	True	NA	29	True	ATTAAA	-21	NA	167220885	167427340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_87816.nic	chr7	+	974	6	NIC	ENSG00000165055.16	novel	977	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_5	154.478995335936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACCTGCCATTCCAT	128471276	True	NA	1	True	AATAAA	-20	NA	128476735	128488597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128488322
transcript_87818.nic	chr7	+	884	5	NIC	ENSG00000165055.16	novel	411	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_4	178.433460987563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACCTGCCATTCCAT	128471274	True	NA	1	True	AATAAA	-20	NA	128476733	128488597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128488322
transcript_87821.known	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	128449353	True	NA	14	True	AATAAA	-19	NA	128455877	128458418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128456024_128457200
transcript_87823.known	chr7	+	785	2	FSM	ENSG00000135245.10	ENST00000435296.2	785	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCTGTTTAATGCA	128449324	True	NA	NA	False	AAAAAG	-5	NA	128455848	128457924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128455910_128457200
transcript_87824.known	chr7	+	1370	2	FSM	ENSG00000135245.10	ENST00000481454.1	1370	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	128449378	True	NA	14	True	AATAAA	-19	NA	128455902	128458418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128456701_128457846
transcript_87825.known	chr7	+	1590	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_5	131.633070715996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	128471269	True	NA	NA	False	AATAAA	-12	NA	128476728	128502126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_87827.known	chr7	+	1574	8	FSM	ENSG00000135248.16	ENST00000485070.5	1574	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.91662969499982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATGTTTTCT	128708902	True	NA	NA	False	AGTAAA	-10	NA	128709060	128731611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128709208_128713922_128714133_128716812_128716998_128718891_128719084_128723196_128723319_128726833_128726872_128729901_128730070_128731099
transcript_8783.nic	chr1	+	867	7	ISM	ENSG00000143190.23	ENST00000367866.7	13843	16	-4	51052	-4	2105	5prime_fragment	FALSE	canonical	3	32	junction_1	4.59770474137791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCGTTTAAAAAAAGTTT	167217786	True	NA	NA	False	ATTAAA	-18	NA	167220881	167376288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028
transcript_87831.nic	chr7	+	429	2	ISM	ENSG00000135248.16	ENST00000493738.5	873	5	-35	9228	-6	-4884	5prime_fragment	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCCTTTGTGTGTAA	128708896	True	NA	NA	False	AATACA	-15	NA	128709054	128714198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_128709208_128713922
transcript_87836.known	chr7	+	2572	8	FSM	ENSG00000128595.17	ENST00000479257.5	2572	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	987.885001156614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAGGAAAAATACA	128703700	True	NA	NA	False	NA	NA	NA	128739403	128769936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_87837.known	chr7	+	4225	8	FSM	ENSG00000128595.17	ENST00000542996.6	4225	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1075.86011153488	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	128703588	True	NA	17	True	AATAAA	-18	NA	128739291	128771477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_8784.known	chr1	-	1078	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.46969384566991	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGGAAAGGAGCCTAG	-167439546	True	NA	NA	False	NA	NA	NA	167439640	167431172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
transcript_87840.known	chr7	+	5266	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_2	283.868171672854	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTTTGGAGCAACT	128703655	True	NA	21	True	AATAAA	-14	NA	128739358	128773400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_87843.known	chr7	+	2438	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_3	897.549147524648	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	128703659	True	NA	27	True	NA	NA	NA	128739362	128770576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_87847.known	chr7	+	3210	6	FSM	ENSG00000128595.17	ENST00000535011.6	3210	6	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_5	828.736484052681	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	128703588	True	NA	17	True	AATAAA	-18	NA	128739291	128771477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128769062
transcript_8785.known	chr1	+	4978	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	70.4812031679369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTAGTAATTTTATAA	167710863	True	NA	16	True	AATAAA	-17	NA	167721981	167791919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
transcript_8786.known	chr1	+	607	2	FSM	ENSG00000197965.12	ENST00000464954.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAAATAAGTTCAGCAT	167710831	True	NA	NA	False	NA	NA	NA	167721949	167765896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167722243_167765582
transcript_87863.known	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	128844385	True	NA	36	True	ATTAAA	-20	NA	128862903	128865844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128863063_128865119_128865204_128865376
transcript_87864.known	chr7	+	678	2	FSM	ENSG00000128524.5	ENST00000249289.5	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1883	junction_1	0	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTGGGTGCTGGAAA	128844337	True	NA	39	True	ATTAAA	-23	NA	128862855	128865847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128863063_128865376
transcript_87866.known	chr7	-	4345	23	FSM	ENSG00000064419.14	ENST00000265388.10	4345	23	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_17	6.42068583654194	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	-129050570	True	NA	-6	True	AATAAA	-15	NA	129055111	128954184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_87869.known	chr7	-	4514	23	FSM	ENSG00000064419.14	ENST00000627585.2	4514	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	8.00516362281866	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTGTTTTTACTTTC	-129055161	False	NA	-1	True	AATAAA	-20	NA	129055173	128954179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990203_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_87870.known	chr7	+	2866	20	FSM	ENSG00000128578.10	ENST00000435494.2	2866	20	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	6.07478782274844	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGAGTTGTCCCAAAAT	129433631	True	NA	6	True	AATAAA	-15	NA	129434445	129483631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841
transcript_87872.known	chr7	+	2424	11	FSM	ENSG00000106459.15	ENST00000223190.8	2424	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	13.4922199804183	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	129610629	True	NA	15	True	ATTAAA	-24	NA	129611755	129756015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_87875.known	chr7	-	5162	7	FSM	ENSG00000186591.13	ENST00000355621.8	5162	7	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_3	36.4539283053128	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGACCTTGATCAATA	-129944247	True	NA	0	True	AATAAA	-21	NA	129952960	129830731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_87877.known	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	369.761317742629	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-130048242	True	NA	-40	True	NA	NA	NA	130051389	130018325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_8788.known	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	19.255270242164	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	167933315	True	NA	6	True	ATTAAA	-20	NA	167936707	168075834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_87882.known	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	287.088879428232	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048227	True	NA	-6	True	AATAAA	-14	NA	130051374	130018291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_87893.known	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_14	30.8263735480262	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	-130202108	True	NA	-4	True	ATTAAA	-31	NA	130205406	130164712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_87895.known	chr7	-	1961	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	65.4724297185803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCAGTCTTTTTTTT	-130202105	True	NA	NA	False	NA	NA	NA	130205403	130166077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_87898.known	chr7	-	2612	12	FSM	ENSG00000106477.20	ENST00000676115.1	2612	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	33.6289918211815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGGTAAGATTTGCCTTA	-130439992	True	NA	NA	False	NA	NA	NA	130441010	130397575	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130426628_130426760_130427954_130428019_130440933
transcript_87899.known	chr7	-	6292	11	FSM	ENSG00000106477.20	ENST00000223208.10	6292	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	11.534296684237	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGATCTTTTCTT	-130439998	True	NA	NA	False	AGTAAA	-15	NA	130441016	130393770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_87903.known	chr7	-	2589	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	25.7413535765044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	NA	False	NA	-74	True	NA	NA	NA	130441237	130397478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_87907.known	chr7	-	3161	3	FSM	ENSG00000106477.20	ENST00000489512.5	3161	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	44	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAAGTGTAGACA	-130440038	True	NA	NA	False	AATAAA	-39	NA	130441056	130419033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130422008_130427954_130428019_130440933
transcript_87908.known	chr7	-	2541	11	FSM	ENSG00000106477.20	ENST00000676243.1	2541	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	27.371700714424	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTAAGATTTGCCTTAAC	-130440041	True	NA	NA	False	NA	NA	NA	130441059	130397573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_87909.known	chr7	-	1012	10	FSM	ENSG00000106477.20	ENST00000343969.10	1012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.8804201137273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-130439998	True	NA	-6	True	AATAAA	-21	NA	130441016	130398843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_87910.known	chr7	-	1272	11	FSM	ENSG00000106477.20	ENST00000675935.1	1272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.5392711890125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-130440060	True	NA	-6	True	AATAAA	-21	NA	130441078	130398843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402791_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_87912.known	chr7	-	3134	24	FSM	ENSG00000158623.14	ENST00000425248.5	3134	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	15.3210136530609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-130660597	True	NA	-33	True	AATAAA	-20	NA	130668748	130506237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130506807_130507273_130507373_130507684_130507824_130508561_130508660_130547673_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_87914.nnic	chr7	-	879	10	NNC	ENSG00000158623.14	novel	3134	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7878400604891	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-130660597	True	NA	-33	True	AATAAA	-20	NA	130668748	130506237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_130506300_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_87915.nnic	chr7	-	864	6	NNC	ENSG00000213265.9	novel	1633	8	NA	NA	17797	26397	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.4999082568035	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTAGTTAGTGTCTTA	-130660597	True	NA	NA	False	TATAAA	-24	NA	130668748	130642245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_130642707_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_87919.known	chr7	+	2443	12	FSM	ENSG00000106484.16	ENST00000341441.9	2443	12	0	0	0	0	multi-exon	TRUE	canonical	3	809	junction_1	163.03586787844	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486170	130506292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_87922.nic	chr7	+	2407	12	NIC	ENSG00000106484.16	novel	2443	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	335.282587115914	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	130477317	True	NA	16	True	AATAAA	-18	NA	130486330	130506292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_87923.known	chr7	+	2337	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	359.358609191431	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486174	130506292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_87927.known	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	458.229429434645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	130477322	True	NA	NA	False	NA	NA	NA	130486335	130506465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_87930.known	chr7	-	1241	5	FSM	ENSG00000231721.7	ENST00000645248.1	1241	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.34428877022476	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACTGCAATCTGTGTTT	-131107537	False	NA	-9	True	AATAAA	-12	NA	131107920	130944170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130944907_130945719_130945836_130984052_130984110_131052424_131052556_131107719
transcript_87932.known	chr7	+	2448	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	86.8920102960404	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	131322094	True	NA	13	True	AATAAA	-25	NA	131327896	131487962	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
transcript_87933.nnic	chr7	+	2416	18	NNC	ENSG00000128585.18	novel	11136	18	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_17	81.5728599957687	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATATATTTT	131322050	True	NA	16	True	AATAAA	-28	NA	131327852	131487965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487682
transcript_87940.nic	chr7	+	1080	2	ISM	ENSG00000128585.18	ENST00000494785.5	2386	17	-30	102602	-3	-22939	5prime_fragment	FALSE	canonical	3	401	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGGCGCGGTGGCT	131322050	True	NA	NA	False	NA	NA	NA	131327852	131376358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_131327998_131375423
transcript_87942.known	chr7	+	406	1	FSM	ENSG00000233287.1	ENST00000427253.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGATGCTTCGTTTTG	NA	False	NA	NA	False	NA	NA	NA	131242589	131242995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_131242600_131243000
transcript_87944.known	chr7	-	1900	7	FSM	ENSG00000236753.7	ENST00000670684.1	1900	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.71404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCTGTCTCTACT	-131327605	True	NA	NA	False	NA	NA	NA	131327763	131309926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131310774_131311129_131311224_131321878_131321932_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_87945.known	chr7	-	2043	6	FSM	ENSG00000236753.7	ENST00000429067.5	2043	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.15363949069005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-131327618	True	NA	NA	False	NA	NA	NA	131327776	131309743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131310774_131311129_131311224_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_87946.known	chr7	-	1497	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCGTCTCTACTAAAA	-131327588	True	NA	NA	False	NA	NA	NA	131327746	131322767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
transcript_87947.known	chr7	-	1510	4	FSM	ENSG00000236753.7	ENST00000454515.6	1510	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	-131327559	True	NA	NA	False	NA	NA	NA	131327717	131322765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131323869_131324251_131324426_131326805_131326936_131327614
transcript_87949.known	chr7	-	1440	4	FSM	ENSG00000236753.7	ENST00000669897.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.73488351136175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGAGACCATCCTGGCT	-131327569	True	NA	NA	False	NA	NA	NA	131327727	131322796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131323869_131324300_131324426_131326805_131326936_131327614
transcript_87955.known	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	480.390726388426	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	-133064494	True	NA	-46	True	ATTAAA	-34	NA	133082032	132785392	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_87959.known	chr7	-	1604	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_6	59.3859737442354	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCATTGTAGCTCCTC	-133064552	True	NA	-12	True	AATAAA	-17	NA	133082090	132784869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_87973.known	chr7	+	4182	18	FSM	ENSG00000131558.15	ENST00000253861.5	4182	18	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_10	24.8968807540277	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	133248416	True	NA	15	True	ATTAAA	-22	NA	133253077	134065761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133630044_133630142_133817324_133817545_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_87974.known	chr7	+	2364	9	FSM	ENSG00000131558.15	ENST00000462055.5	2364	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	22.1045102863646	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTGGTGAGGGCCTGC	133248433	True	NA	NA	False	AAAAAG	-22	NA	133253094	133481078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049
transcript_87975.nic	chr7	+	677	4	ISM	ENSG00000131558.15	ENST00000462055.5	2364	9	-25	175028	-3	139	5prime_fragment	FALSE	canonical	3	297	junction_3	24.0554914035583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAATCAGGTTAAAGAG	133248408	True	NA	NA	False	NA	NA	NA	133253069	133306050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876
transcript_87976.known	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	133248437	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_133253188_133253539
transcript_8798.known	chr1	-	2177	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	36.9425229241318	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTTTCACTTCCTT	-167931477	True	NA	-6	True	ATTAAA	-12	NA	167936040	167916728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
transcript_87982.known	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	17.7458045815599	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	-134310369	True	NA	-2	True	AATAAA	-19	NA	134316930	134289331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_87985.nic	chr7	-	1791	9	ISM	ENSG00000205060.11	ENST00000378509.9	6676	10	-66	6262	-66	-988	5prime_fragment	FALSE	canonical	3	194	junction_5	18.0134498361641	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTCAAAGTAATCAAG	-134310435	True	NA	NA	False	NA	NA	NA	134316996	134295593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_87988.known	chr7	-	1033	8	FSM	ENSG00000205060.11	ENST00000470969.2	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	18.2275861802704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCATTTTGCTTTGGA	-134310336	True	NA	NA	False	AGTAAA	-14	NA	134316897	134299308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_87989.known	chr7	-	1855	2	FSM	ENSG00000273297.3	ENST00000609619.2	1855	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGGAGTCTTCTTCTA	NA	False	NA	NA	False	ATTAAA	-19	NA	134432485	134417291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134418975_134432313
transcript_88001.known	chr7	-	1361	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_6	125.151562436299	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	-134448769	True	NA	-7	True	AATAAA	-15	NA	134459100	134442355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_8801.nnic	chr1	+	2040	8	NNC	ENSG00000143155.13	novel	2998	7	NA	NA	-109	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	155.031267419031	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTACTATTTCATTTATT	168178842	False	NA	17	True	AATAAA	-23	NA	168178852	168202114	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902_168200705_168201776
transcript_88013.known	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_5	132.214787372669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	-134448771	True	NA	-38	True	NA	NA	NA	134459102	134442386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_8802.known	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	1	111	junction_6	106.981955903269	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	168172909	True	NA	12	True	AATAAA	-18	NA	168178961	168202109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
transcript_88022.known	chr7	-	1852	10	FSM	ENSG00000085662.14	ENST00000434222.5	1852	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	467.736023472985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGCCTCAAATAAAAAGT	-134448771	True	NA	-37	True	NA	NA	NA	134459102	134442385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447460_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_88023.known	chr7	+	2051	4	FSM	ENSG00000172331.12	ENST00000393132.2	2051	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.266645147405	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTGTTTG	134644362	True	NA	25	True	AATAAA	-37	NA	134646830	134679813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134646938_134658347_134658669_134661446_134662109_134678852
transcript_88024.nnic	chr7	+	1589	3	NNC	ENSG00000172331.12	novel	1870	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAAGTGTCTCCGTGT	134644319	True	NA	20	True	AATAAA	-32	NA	134646787	134679808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_134646938_134661446_134661930_134678852
transcript_88025.known	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	28.5	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	134644384	True	NA	28	True	AATAAA	-40	NA	134646852	134679816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134646938_134661446_134662109_134678852
transcript_88028.known	chr7	+	1870	4	FSM	ENSG00000172331.12	ENST00000418040.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	102.779159149876	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAAGTGTCTCCGTGT	134644342	True	NA	20	True	AATAAA	-32	NA	134646810	134679808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134646938_134647134_134647260_134661446_134662109_134678852
transcript_88029.known	chr7	+	2665	15	FSM	ENSG00000122786.20	ENST00000422748.5	2665	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	274.880688403429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	134779396	True	NA	86	True	NA	NA	NA	134779419	134968859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88032.known	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_3	124.61980049156	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	134756594	True	NA	40	True	AATAAA	-21	NA	134779677	134970641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88036.known	chr7	+	2124	12	FSM	ENSG00000122786.20	ENST00000424922.5	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	150.490877239225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	134891471	False	NA	86	True	NA	NA	NA	134891609	134968859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88040.nnic	chr7	+	1419	6	NNC	ENSG00000122786.20	novel	4114	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	266.725026947229	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	134756553	True	NA	40	True	AATAAA	-21	NA	134779636	134970641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933289_134969983
transcript_88043.nic	chr7	+	914	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-212	29147	18	0	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	134779418	True	NA	2	True	AAAAAG	-16	NA	134779437	134933242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_88044.nic	chr7	+	1065	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-273	29057	-43	90	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAGGAGGAGGAAG	NA	False	NA	13	True	AAGAAA	-17	NA	134779376	134933332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_88045.nic	chr7	+	1282	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-16	28583	0	564	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAAGAGAAAAGGGCAG	134756550	True	NA	NA	False	GATAAA	-43	NA	134779633	134933806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_88049.nic	chr7	+	622	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-156	35617	-4	0	5prime_fragment	FALSE	canonical	3	295	junction_1	266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	134887843	True	NA	2	True	AAAAAG	-16	NA	134891453	134933242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_8805.known	chr1	+	727	5	FSM	ENSG00000143155.13	ENST00000367830.3	727	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	174.754649437433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACAAGTATGGTTATTC	168173002	True	NA	NA	False	AATAAA	-27	NA	168179054	168192395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168192207
transcript_88050.nic	chr7	+	789	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-233	35527	-23	90	5prime_fragment	FALSE	canonical	3	295	junction_1	266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAGGAGGAGGAAG	NA	False	NA	13	True	AAGAAA	-17	NA	134891376	134933332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_88052.nic	chr7	+	1840	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-233	34476	-23	1141	5prime_fragment	FALSE	canonical	3	295	junction_1	266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGGTGGTGTGTTGGC	NA	False	NA	NA	False	GATAAA	-1	NA	134891376	134934383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_88053.known	chr7	+	5011	15	FSM	ENSG00000122786.20	ENST00000361675.7	5011	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	254.574204329905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTGAGTCTTGGTT	134756550	True	NA	12	True	AATAAA	-25	NA	134779633	134970729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134934078_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88055.nic	chr7	+	901	5	NIC	ENSG00000146856.14	novel	856	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	8.8140512819021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	134985888	True	NA	-36	True	NA	NA	NA	134986495	134995550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_134986702_134987888_134987997_134989249_134989311_134993492_134993679_134995210
transcript_88057.nic	chr7	+	752	3	ISM	ENSG00000146856.14	ENST00000476700.5	2979	5	-52	22824	-12	1323	5prime_fragment	FALSE	canonical	3	26	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGACATCTTGA	134985888	True	NA	4	True	AATAAA	-21	NA	134986495	134989687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134986702_134987888_134987997_134989249
transcript_88058.nic	chr7	+	1967	2	NIC	ENSG00000146856.14	novel	497	4	NA	NA	-40	1323	intron_retention	FALSE	canonical	3	29	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGACATCTTGA	NA	False	NA	4	True	AATAAA	-21	NA	134986467	134989687	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_134987997_134989249
transcript_88059.known	chr7	+	856	5	FSM	ENSG00000146856.14	ENST00000494702.2	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.95474734428616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	134985947	True	NA	-36	True	NA	NA	NA	134986554	134995550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134986702_134987874_134987997_134989249_134989311_134993492_134993679_134995210
transcript_88063.known	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.878569196893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-135170489	False	NA	0	True	AATACA	-37	NA	135170524	135165781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
transcript_88064.known	chr7	-	1738	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.5870749049728	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135170626	False	NA	-3	True	AATACA	-34	NA	135170661	135165784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
transcript_88065.known	chr7	-	1579	4	FSM	ENSG00000122783.17	ENST00000430372.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100.180947401301	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATACACAAGTGCTA	-135170760	False	NA	-47	True	AATAAA	-17	NA	135170795	135165828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168744_135169061_135170651
transcript_88066.nic	chr7	-	1745	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	69.1728912861743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166018	True	NA	-3	True	AATACA	-34	NA	135170705	135165784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_135166872_135167731_135167808_135168785_135169061_135170398
transcript_88067.known	chr7	-	1494	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	67.4405087630737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166020	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
transcript_88070.nic	chr7	-	1564	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	74.5177085590324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166020	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_135166872_135167731_135167808_135168968_135169061_135170398
transcript_88071.known	chr7	-	596	4	FSM	ENSG00000122783.17	ENST00000483029.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	74.6234994265658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCAGAAGCCCCTGGA	-135165988	True	NA	NA	False	NA	NA	NA	135170675	135166467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168968_135169061_135170651
transcript_88074.nnic	chr7	-	1574	3	NIC	ENSG00000122783.17	novel	1494	4	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135170791	False	NA	-3	True	AATACA	-34	NA	135170826	135165784	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_135166872_135168748_135169061_135170651
transcript_88077.known	chr7	-	578	2	FSM	ENSG00000122783.17	ENST00000486115.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACCCACTTCTGCCTCT	-135170476	False	4687	NA	False	GGGGCT	-37	NA	135170511	135168595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135169061_135170398
transcript_88078.known	chr7	-	844	2	FSM	ENSG00000122783.17	ENST00000487774.1	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGGGGGGGTGGTGAGT	-135166051	True	NA	NA	False	NA	NA	NA	135170738	135168303	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135169061_135170651
transcript_88079.known	chr7	-	2576	3	FSM	ENSG00000122783.17	ENST00000459937.5	2576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGACAACAAAATTTTAT	-135166008	True	NA	NA	False	AATAAA	-18	NA	135170695	135092362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135094583_135168748_135169061_135170651
transcript_8808.known	chr1	+	11040	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	9.71638632750397	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	168222942	True	NA	12	True	AATAAA	-22	NA	168226003	168253021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_88080.known	chr7	-	4580	15	FSM	ENSG00000105875.15	ENST00000354475.5	4580	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	6.72074157715789	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCTCTCCTTCCATA	-135210791	True	NA	-5	True	AATAAA	-16	NA	135211526	135183838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_88083.known	chr7	-	3297	11	FSM	ENSG00000080802.20	ENST00000423368.6	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.8275798681535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGGTTGTCCTTGTT	-135505583	True	NA	-2	True	AATAAA	-19	NA	135510077	135361797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88084.known	chr7	-	2215	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	24.943135328182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAGGAGCAACCATTA	-135505597	True	NA	NA	False	NA	NA	NA	135510091	135362884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88085.known	chr7	-	4642	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	24.6919015063644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCTTGAAATGTTTT	-135505582	True	NA	NA	False	AAAAAG	-3	NA	135510076	135386150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88087.known	chr7	-	3783	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.6563929422709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	-135505633	True	NA	NA	False	NA	NA	NA	135510127	135387069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88092.nic	chr7	+	1312	6	ISM	ENSG00000155561.15	ENST00000285968.11	6264	43	-1	70323	-1	4653	5prime_fragment	FALSE	canonical	3	352	junction_1	48.8057373676497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATGATTTCTATTTT	135546247	True	NA	NA	False	AATAAA	-17	NA	135557915	135578430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795
transcript_88096.known	chr7	+	6264	43	FSM	ENSG00000155561.15	ENST00000285968.11	6264	43	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	85.8674194256521	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	135546248	True	NA	NA	False	AATAAA	-21	NA	135557916	135648753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804_135602995_135604339_135604461_135606144_135606227_135606750_135606916_135607246_135607372_135614158_135614274_135615915_135616066_135616654_135616727_135617089_135617248_135617601_135617683_135618411_135618604_135619422_135619691_135619789_135619889_135622776_135622926_135625163_135625356_135626239_135626362_135627972_135628112_135630343_135630471_135635580_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
transcript_88097.known	chr7	+	2461	3	FSM	ENSG00000243317.8	ENST00000507606.3	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	85	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGCTTTTTGGCTAGT	135654954	True	NA	9	True	AATAAA	-20	NA	135662513	135676416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_135662595_135672752_135672807_135674090
transcript_88102.known	chr7	+	2004	3	FSM	ENSG00000243317.8	ENST00000422968.2	2004	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGAAAGAAGTGTTAAC	135655004	False	NA	NA	False	AATACA	-21	NA	135662563	135693418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_135662595_135688903_135689029_135691570
transcript_88104.known	chr7	-	2897	16	FSM	ENSG00000164707.16	ENST00000354042.8	2897	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1.6	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGTTGTATCTAGTCT	-135728101	True	NA	NA	False	AATAAA	-33	NA	135728186	135681236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702882_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
transcript_88106.known	chr7	-	3782	4	FSM	ENSG00000105887.11	ENST00000393085.4	3782	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	8.83176086632785	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTGTCAGCAGCATT	-135971346	True	NA	-7	True	AATAAA	-17	NA	135977359	135926759	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135930013_135950598_135950683_135951516_135951631_135977028
transcript_88107.known	chr7	-	1482	5	FSM	ENSG00000105894.12	ENST00000348225.7	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.1026313764871	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-137343620	True	NA	NA	False	AATAAA	-24	NA	137343733	137227340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_137228076_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_88112.known	chr7	+	75	1	FSM	ENSG00000279483.2	ENST00000623936.2	75	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCGCTAGCTTGTTGCA	137433202	False	NA	61	True	AAGAAA	-20	NA	137513858	137513933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_137513900_137513900
transcript_88113.known	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	7.25718035235908	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	-137997730	True	NA	2	True	AATAAA	-35	NA	138002047	137912810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
transcript_88114.known	chr7	-	2360	10	FSM	ENSG00000182158.16	ENST00000456390.5	2360	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	10.130018951148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-137997750	True	NA	NA	False	NA	NA	NA	138002067	137884266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_88115.known	chr7	+	3799	19	FSM	ENSG00000122779.18	ENST00000415680.6	3799	19	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_9	144.863633194195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGATTTTTGTTTT	138460312	False	NA	NA	False	ATTAAA	-17	NA	138460434	138585585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554865_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_88116.known	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_9	94.5673709813326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	138442558	True	NA	8	True	AATAAA	-21	NA	138460258	138589996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_8812.known	chr1	-	1678	13	FSM	ENSG00000143156.14	ENST00000525440.5	1678	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	106.171114506515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTGACTTTGGTTTA	-169367935	False	NA	NA	False	AATAAA	-12	NA	169367946	169132536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169132818_169169446_169169555_169190642_169190706_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_88121.nnic	chr7	-	1577	13	NNC	ENSG00000157703.16	novel	1804	15	NA	NA	-607	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	7.38382240667619	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	-138664648	True	NA	-1	True	AATAAA	-19	NA	138664831	138594284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138659863_138659989_138663073_138663146_138664785
transcript_88124.nnic	chr7	-	1452	12	NNC	ENSG00000157703.16	novel	1804	15	NA	NA	-607	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	6.61203510762479	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	-138664648	True	NA	-1	True	AATAAA	-19	NA	138664831	138594284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073_138663146_138664785
transcript_88128.known	chr7	-	3136	22	FSM	ENSG00000105929.16	ENST00000310018.7	3136	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.30743646468299	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCCTTAAGATGTCTT	-138798161	True	NA	1	True	AATAAA	-16	NA	138798196	138706293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_138706718_138709623_138709796_138715763_138715882_138721896_138722026_138728760_138728863_138732876_138733094_138734135_138734255_138739539_138739634_138745122_138745281_138747424_138747565_138749166_138749318_138752624_138752838_138755688_138755783_138756457_138756541_138759751_138759879_138762339_138762435_138762899_138763026_138768779_138768875_138769172_138769252_138771130_138771265_138786157_138786261_138798033
transcript_88130.nnic	chr7	+	464	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTGTTGCTTCTACT	139035793	False	NA	5	True	AATAAA	-13	NA	139035814	139036945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_+_139035986_139036652
transcript_88134.known	chr7	+	4299	18	FSM	ENSG00000105948.13	ENST00000464848.5	4299	18	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	14.4586272901056	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATATTCTGTTGAGTG	139132752	True	NA	9	True	ATTAAA	-20	NA	139133777	139191986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88136.known	chr7	+	2015	17	FSM	ENSG00000105948.13	ENST00000343187.8	2015	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	18.9677975461043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGCATCATTGTATCAT	139132757	True	NA	5	True	NA	NA	NA	139133782	139189800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88137.nic	chr7	+	1826	16	NIC	ENSG00000105948.13	novel	4299	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	19.805274269469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGCATCATTGTATCAT	139132721	True	NA	5	True	NA	NA	NA	139133746	139189800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88138.known	chr7	+	1599	15	FSM	ENSG00000105948.13	ENST00000495038.5	1599	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	20.8889190427727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTTCTTCCAAAAATG	139132738	True	NA	NA	False	NA	NA	NA	139133763	139189665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88139.known	chr7	+	1193	8	FSM	ENSG00000105948.13	ENST00000474035.6	1193	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	13.4998110342028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGGCTGAGATTTGGA	139132752	True	NA	NA	False	AATAAA	-24	NA	139133777	139161343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947
transcript_88141.nic	chr7	+	998	7	ISM	ENSG00000105948.13	ENST00000474035.6	1193	8	-31	12796	3	299	5prime_fragment	FALSE	canonical	3	62	junction_5	8.67947771086102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTGACTTCTGAATTA	139132721	True	NA	NA	False	NA	NA	NA	139133746	139148547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205
transcript_88142.nic	chr7	+	1050	7	ISM	ENSG00000105948.13	ENST00000474035.6	1193	8	-31	12744	3	351	5prime_fragment	FALSE	canonical	3	62	junction_5	8.67947771086102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAGATGCCCTACATT	139132721	True	NA	NA	False	ATTAAA	-13	NA	139133746	139148599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205
transcript_88144.known	chr7	+	1794	16	FSM	ENSG00000105948.13	ENST00000478836.6	1794	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	24.8608572302369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATCATTGTATCATTT	139132752	True	NA	7	True	NA	NA	NA	139133777	139189802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166842_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88148.known	chr7	+	2411	11	FSM	ENSG00000146963.18	ENST00000456182.5	2411	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	317.14482496172	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACCATTATTAAACTG	139347419	True	NA	-28	True	AATAAA	-17	NA	139359911	139423151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_8815.known	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_10	27.3178414742072	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169364736	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_88152.known	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	63.8783566197851	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	139347401	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_88163.nnic	chr7	+	526	2	NIC	ENSG00000164898.13	novel	460	2	NA	NA	-163	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCTCTGTAATTTTG	NA	False	NA	10	True	ATTAAA	-17	NA	139340286	139345795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_139340518_139345500
transcript_88164.known	chr7	+	460	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGTTTTTCTCTGTAA	139340431	True	NA	5	True	ATTAAA	-12	NA	139340449	139345790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139340620_139345500
transcript_88165.known	chr7	+	1014	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	139338731	True	NA	NA	False	AATAAA	-20	NA	139341336	139346328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139341523_139345500
transcript_88168.known	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_7	59.0634387410551	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392400	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88171.nic	chr7	-	3093	13	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	131.676054517643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392406	True	NA	NA	False	AATAAA	-18	NA	140398536	140333751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88176.known	chr7	-	2955	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	123.076674348128	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392327	True	NA	NA	False	AATAAA	-18	NA	140398457	140333751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88186.nnic	chr7	-	511	4	NNC	ENSG00000157800.18	novel	550	2	NA	NA	-4	3726	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	227.428132726705	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGATTGTGATTTTTGT	-140392406	True	NA	-3	True	AATAAA	-16	NA	140398536	140375532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_140375655_140380281_140380391_140382437_140382597_140398415
transcript_88187.known	chr7	-	2736	2	FSM	ENSG00000157800.18	ENST00000493423.1	2736	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGTAACATATT	NA	False	NA	NA	False	AATAAA	-20	NA	140404433	140400335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140402823_140404184
transcript_88193.known	chr7	+	2574	8	FSM	ENSG00000133597.11	ENST00000072869.9	2574	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	4.89064079103534	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCATTTCTTGAC	140672503	True	NA	16	True	AATAAA	-16	NA	140672944	140695110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140674264_140674610_140674758_140679154_140679284_140681041_140681138_140686989_140687242_140689596_140689726_140690759_140690814_140694662
transcript_8820.nic	chr1	-	1212	10	NIC	ENSG00000143156.14	novel	1590	12	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	91.9006441493297	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169364751	True	NA	NA	False	AATAAA	-18	NA	169367812	169132530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169367707
transcript_88201.known	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	1761.85981281145	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	140671774	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
transcript_88203.known	chr7	+	465	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_3	466.612139671579	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140671734	True	NA	23	True	ATTAAA	-33	NA	140696707	140706643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
transcript_88205.known	chr7	+	420	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1753.45075652428	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	140695958	True	NA	26	True	ATTAAA	-36	NA	140696987	140706646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
transcript_88207.known	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1765.2944985658	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	140697205	False	NA	24	True	ATTAAA	-34	NA	140697223	140706644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
transcript_88209.known	chr7	+	559	2	FSM	ENSG00000090266.13	ENST00000461457.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTCTGGAAACTGATAAA	140671714	True	NA	NA	False	AAGAAA	-45	NA	140696687	140721955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140696843_140721551
transcript_88210.known	chr7	+	503	5	FSM	ENSG00000090266.13	ENST00000472695.5	503	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1856.13541733894	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140695962	True	NA	23	True	ATTAAA	-33	NA	140696991	140706643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140697075_140700869_140700960_140702865_140703011_140704859_140704964_140706562
transcript_88215.known	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	487	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-141006244	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010618_141014910
transcript_88217.known	chr7	-	688	3	FSM	ENSG00000090263.16	ENST00000496958.5	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	574	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-141014417	False	NA	-9	True	AATAAA	-13	NA	141014429	141006167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010661_141014351
transcript_88218.known	chr7	-	853	3	FSM	ENSG00000090263.16	ENST00000393008.7	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	546	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAAACTTCTTTCATC	-141014667	False	NA	NA	False	NA	NA	NA	141014679	141006053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010661_141014550
transcript_88219.known	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	281.5	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	-141006230	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010661_141014910
transcript_8822.known	chr1	-	4298	7	FSM	ENSG00000143156.14	ENST00000524967.5	4298	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	21.6929327969579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGATATCTTTGCAG	-169364711	True	NA	NA	False	NA	NA	NA	169367772	169283820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_88220.known	chr7	-	466	2	FSM	ENSG00000090263.16	ENST00000484502.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-141014636	False	8722	-9	True	AATAAA	-13	NA	141014648	141006167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141014550
transcript_88221.known	chr7	-	535	2	FSM	ENSG00000090263.16	ENST00000485202.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCTTGTTGGAAGATA	-141014640	False	8722	NA	False	AAAAAG	-5	NA	141014652	141010227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141010661_141014550
transcript_88222.known	chr7	-	541	2	FSM	ENSG00000090263.16	ENST00000496641.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGAGGTGTTTAATCAT	-141006227	True	NA	NA	False	AATAGA	-10	NA	141014949	141010158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141010661_141014910
transcript_88223.known	chr7	+	3628	16	FSM	ENSG00000006530.18	ENST00000649286.2	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_9	36.3688511412353	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTGATTCAGG	141549278	True	NA	4	True	TATAAA	-17	NA	141551409	141655244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_88228.nic	chr7	+	1206	15	NIC	ENSG00000006530.18	novel	1201	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	73.9010991053556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATTAGCTTTTACTGT	141549284	True	NA	NA	False	AATAAA	-20	NA	141551415	141650599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141650472
transcript_8823.known	chr1	+	2216	6	FSM	ENSG00000143153.14	ENST00000367815.9	2216	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	9.68297474952816	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTGTGTGATTCACT	169104391	True	NA	13	True	AATAAA	-13	NA	169106689	169132719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169106927_169111369_169111499_169124883_169125040_169127223_169127409_169130009_169130091_169131291
transcript_88233.nic	chr7	+	1520	4	ISM	ENSG00000006530.18	ENST00000495028.5	567	5	5	1402	3	566	5prime_fragment	FALSE	canonical	3	217	junction_1	45.6143252352445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	141549283	True	NA	NA	False	AATAGA	-32	NA	141551414	141597906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561
transcript_88237.known	chr7	+	517	8	FSM	ENSG00000106028.11	ENST00000465167.1	517	8	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	1689.61244197645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACGAAAGAGAAGGAGT	141680536	True	NA	-1	True	NA	NA	NA	141738405	141750332	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141741748_141741793_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88261.known	chr7	+	677	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	723.73544890381	3610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	141680488	True	NA	43	True	NA	NA	NA	141738357	141750488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88265.known	chr7	+	884	7	FSM	ENSG00000106028.11	ENST00000612337.4	884	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	1390.42447555494	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	141680464	True	NA	43	True	NA	NA	NA	141738333	141750488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738594_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88272.known	chr7	+	636	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_1	1050.67038123286	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	141680488	True	NA	21	True	NA	NA	NA	141738357	141750354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88276.known	chr7	+	630	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	1305.25931863706	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATATTTCTGAGTGACC	141680526	True	NA	-19	True	NA	NA	NA	141738395	141750314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88282.known	chr7	+	989	7	FSM	ENSG00000106028.11	ENST00000481508.1	989	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1447.11384217767	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	141738588	False	NA	16	True	ATTAAA	-19	NA	141738606	141750461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738999_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88283.known	chr7	+	676	7	FSM	ENSG00000106028.11	ENST00000484178.5	676	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1447.11384217767	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	141738581	False	NA	16	True	ATTAAA	-19	NA	141738599	141750461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738679_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88285.known	chr7	+	1434	6	FSM	ENSG00000106028.11	ENST00000489378.5	1434	6	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	792.616275381726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGATGAGGTTTCACCA	141680495	True	NA	NA	False	NA	NA	NA	141738364	141746526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495
transcript_8829.known	chr1	+	2524	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	13.3873904186821	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	169367060	True	NA	24	True	AATAAA	-18	NA	169368194	169388305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_88291.known	chr7	+	2620	2	FSM	ENSG00000106028.11	ENST00000496622.1	2620	2	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGATGTATATATTGA	141680488	True	NA	NA	False	AATATA	-27	NA	141738357	141741690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123
transcript_88292.known	chr7	+	662	8	FSM	ENSG00000106028.11	ENST00000469123.5	662	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1692.95269169771	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAGTAATAATCTTT	141680521	True	NA	11	True	ATTAAA	-14	NA	141738390	141750456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141741748_141741799_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88294.nnic	chr7	+	998	5	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	-190	0	multi-exon	FALSE	canonical	3	76	junction_1	20.3224014329016	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	NA	False	NA	18	True	AATAAA	-29	NA	142796174	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88295.nnic	chr7	+	540	5	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	5	0	multi-exon	FALSE	canonical	0	0	junction_1	53.160135440008	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796349	True	NA	18	True	AATAAA	-29	NA	142796369	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796415_142801303_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88296.nnic	chr7	+	951	5	Fusion	ENSG00000211765.1_ENSG00000211772.11	novel	758	4	NA	NA	-142	0	multi-exon	FALSE	canonical	3	8	junction_1	49.6990945591567	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796397	False	NA	18	True	AATAAA	-29	NA	142796417	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796611_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88297.nnic	chr7	+	829	5	Fusion	ENSG00000211765.1_ENSG00000211772.11	novel	758	4	NA	NA	33	0	multi-exon	FALSE	canonical	3	6	junction_1	50.564315480386	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796569	True	NA	18	True	AATAAA	-29	NA	142796592	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796664_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88298.nnic	chr7	+	975	5	Fusion	ENSG00000211766.1_ENSG00000211772.11_ENSG00000211767.1	novel	758	4	NA	NA	-18	0	multi-exon	FALSE	canonical	3	12	junction_1	47.9687398208458	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796655	False	NA	18	True	AATAAA	-29	NA	142796678	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796896_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88299.nnic	chr7	+	1061	5	Fusion	ENSG00000211772.11_ENSG00000211768.1_ENSG00000211767.1	novel	758	4	NA	NA	-102	0	multi-exon	FALSE	canonical	3	17	junction_1	45.8059766842712	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796721	False	NA	18	True	AATAAA	-29	NA	142796744	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142797048_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88303.known	chr7	+	758	4	FSM	ENSG00000211772.11	ENST00000466254.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142801030	False	NA	18	True	AATAAA	-29	NA	142801040	142802748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88304.known	chr7	-	447	2	FSM	ENSG00000237254.2	ENST00000417977.2	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGAGCTGGGTGGGGC	NA	False	NA	NA	False	NA	NA	NA	142813399	142812585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_142812878_142813244
transcript_88305.known	chr7	+	584	4	FSM	ENSG00000106123.12	ENST00000497095.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3295452099452	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAACTGGAATAA	142855078	False	NA	NA	False	AGTAAA	-3	NA	142855103	142862788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_142855386_142861051_142861187_142861999_142862134_142862755
transcript_88308.known	chr7	+	1032	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	27.6028688245794	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260842	True	NA	22	True	AATAAA	-23	NA	143263440	143269115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_88310.known	chr7	+	888	7	FSM	ENSG00000197448.14	ENST00000409500.7	888	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	97.6672354932241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAGACGTCCACCATT	143260830	True	NA	-98	True	NA	NA	NA	143263428	143268995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143267616_143267734_143268090_143268185_143268787
transcript_88311.known	chr7	+	1185	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	24.2653158964716	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260857	True	NA	22	True	AATAAA	-23	NA	143263455	143269115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
transcript_88312.known	chr7	+	850	7	FSM	ENSG00000197448.14	ENST00000443571.6	850	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	97.6638224841841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCAATTCTGCTTTCC	143260842	True	NA	-31	True	NA	NA	NA	143263440	143269062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_88321.known	chr7	+	1257	4	FSM	ENSG00000178826.11	ENST00000409244.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGATCCCAAAGCCTAT	143284880	True	NA	NA	False	ATTAAA	-15	NA	143284950	143287296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143284975_143285347_143285446_143285940_143286203_143286423
transcript_88322.known	chr7	+	4089	11	FSM	ENSG00000106144.20	ENST00000310447.10	4089	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	9.95238664843765	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	143286045	True	NA	19	True	AATAAA	-20	NA	143288350	143307696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143288530_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
transcript_88323.known	chr7	+	3187	23	FSM	ENSG00000188037.14	ENST00000343257.7	3187	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.09820905193089	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTTAATGTGATAG	143316090	False	NA	NA	False	NA	NA	NA	143316110	143352083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143316393_143319754_143319876_143320663_143320796_143321364_143321494_143321714_143321849_143323308_143323387_143324413_143324493_143330771_143330898_143331231_143331317_143331550_143331653_143332418_143332504_143332723_143332874_143339252_143339323_143339510_143339622_143341928_143342143_143342371_143342506_143345520_143345763_143346139_143346252_143346578_143346659_143346910_143346950_143350371_143350477_143350567_143350655_143351593
transcript_88325.nnic	chr7	+	682	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2053	73	multi-exon	FALSE	canonical	0	0	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAACAGCTTCCATTAT	143361658	True	NA	76	True	ATTAAA	-12	NA	143361845	143364302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
transcript_88326.known	chr7	-	648	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	3	-241	0	multi-exon	FALSE	canonical	3	72	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTATATGACTCAGTAT	-143380485	False	NA	-11	True	AATAAA	-19	NA	143380495	143379691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143380110_143380265
transcript_88327.nnic	chr7	+	626	4	NNC	ENSG00000229153.6	novel	516	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	31.2836485510668	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143407679	True	NA	9	True	AATAAA	-23	NA	143407812	143415830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_143407891_143414323_143414446_143415067_143415200_143415536
transcript_88329.nnic	chr7	+	1063	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2993	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	23.7954243967663	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410301	True	NA	9	True	AATAAA	-23	NA	143410805	143415830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_143410981_143413983_143414446_143415067_143415200_143415536
transcript_88330.nnic	chr7	+	720	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2996	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	24.7296493213219	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410304	True	NA	9	True	AATAAA	-23	NA	143410808	143415830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_143410981_143414323_143414446_143415067_143415200_143415536
transcript_88331.nnic	chr7	+	1171	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3052	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	29.9332590941915	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGTCCAGGACAATTT	143410360	True	NA	4	True	AATAAA	-14	NA	143410864	143496766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_143410981_143414323_143414446_143415067_143415200_143495965
transcript_88332.known	chr7	+	484	3	FSM	ENSG00000229153.6	ENST00000421648.2	516	3	29	3	20	0	multi-exon	FALSE	canonical	3	16	junction_1	33.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143407699	False	NA	9	True	AATAAA	-23	NA	143407832	143415830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143407891_143415067_143415200_143415536
transcript_88335.nnic	chr7	+	1049	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3052	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGTCCAGGACAATTT	143410360	True	NA	4	True	AATAAA	-14	NA	143410864	143496766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_143410981_143415067_143415200_143495965
transcript_88340.known	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_12	63.0751186145162	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	-143400254	True	NA	-6	True	NA	NA	NA	143408856	143391128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_88344.nic	chr7	-	3479	17	NIC	ENSG00000146904.9	novel	3310	18	NA	NA	-17	0	intron_retention	FALSE	canonical	3	508	junction_16	57.7370115264031	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	-143400271	True	NA	-6	True	NA	NA	NA	143408873	143391128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_88350.nic	chr7	-	1396	3	ISM	ENSG00000146904.9	ENST00000488068.5	2922	16	-68	9017	-17	398	5prime_fragment	FALSE	canonical	3	508	junction_2	55	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCATGTTATTGGCACT	-143400271	True	NA	-3	True	AATAAA	-23	NA	143408873	143400427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_143401606_143407610_143407679_143408723
transcript_88352.known	chr7	-	5754	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	23.0162985729678	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-143900254	True	NA	NA	False	AATAAA	-17	NA	143902176	143851374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_8836.nic	chr1	-	1885	6	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.810635289644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-169427161	True	NA	0	True	AATAAA	-23	NA	169427462	169394869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424931_169427287
transcript_88363.known	chr7	+	531	5	FSM	ENSG00000244198.7	ENST00000493248.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	224.487611016733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	144195508	False	NA	NA	False	AATAAA	-43	NA	144195518	144250505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144250439
transcript_8837.known	chr1	-	1860	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	0	45	0	multi-exon	TRUE	canonical	0	0	junction_5	18.810635289644	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-169427116	True	NA	0	True	AATAAA	-23	NA	169427417	169394869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
transcript_88370.nic	chr7	+	579	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	73.030815413769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195846	144243835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_144196058_144207692_144207805_144239042_144239096_144239274_144239389_144243746
transcript_88374.nnic	chr7	+	2367	4	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-48	-714	combination_of_known_splicesites	FALSE	canonical	3	278	junction_1	186.935520671939	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144195839	144215943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_144196058_144200170_144200278_144207692_144207805_144214013
transcript_88378.known	chr7	+	4894	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	260	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATATACTGTGCTATAC	NA	False	NA	-22	True	ATTAAA	-42	NA	144195596	144255116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_144195702_144207692_144207805_144250439
transcript_88379.nic	chr7	+	2253	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-41	-714	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	206	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144195846	144215943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_144196058_144207692_144207805_144214013
transcript_88381.nic	chr7	+	1661	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-41	1196	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGTTAATTCAAGTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	144195846	144251777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_144196058_144207692_144207805_144250439
transcript_88383.known	chr7	-	2609	2	FSM	ENSG00000213214.6	ENST00000378115.3	2609	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144195833	144186082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144188396_144195537
transcript_8839.nnic	chr1	-	934	5	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.5512147960172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-169427161	True	NA	0	True	AATAAA	-23	NA	169427462	169394869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169424810_169424931_169427287
transcript_88390.known	chr7	-	819	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	173.525790590333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144355685	144307147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
transcript_88391.nic	chr7	-	580	5	NIC	ENSG00000244479.7	novel	422	5	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_4	76.1216132251544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355049	False	NA	NA	False	AATAAA	-18	NA	144355194	144307144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144354981
transcript_88394.nic	chr7	-	476	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_3	195.843687669529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355298	True	NA	NA	False	AATAAA	-18	NA	144355443	144307144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144307233_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_88400.nic	chr7	-	527	4	NIC	ENSG00000244479.7	novel	422	5	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_3	60.7965642304088	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355049	False	NA	NA	False	AATAAA	-18	NA	144355194	144307144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144354981
transcript_88401.nic	chr7	-	420	4	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_2	191.991319248206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355298	True	NA	NA	False	AATAAA	-18	NA	144355443	144307144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144355337
transcript_88402.nnic	chr7	-	2844	4	NNC	ENSG00000244479.7	novel	602	4	NA	NA	25	-7033	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	289.621592196899	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCTTGTTATATAT	-144355049	False	NA	NA	False	AATAAA	-19	NA	144355194	144325705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_144328118_144343186_144343299_144350717_144350825_144354981
transcript_88404.nic	chr7	-	2284	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	985	1720	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	276.281659824816	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144354021	False	13	NA	False	AATGAA	-18	NA	144354166	144335047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354031
transcript_88405.nnic	chr7	-	2362	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	25	1720	combination_of_known_splicesites	FALSE	canonical	3	277	junction_3	177.571268947303	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355049	False	NA	NA	False	AATGAA	-18	NA	144355194	144335047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
transcript_88407.known	chr7	+	1990	3	FSM	ENSG00000228960.6	ENST00000479102.1	1990	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCCCGGGTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	144294479	144300934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_144294638_144296279_144296543_144299365
transcript_88409.nic	chr7	-	1556	3	NIC	ENSG00000244479.7	novel	531	5	NA	NA	-42	1196	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	257.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGTTAATTCAAGTCC	-144355298	True	NA	NA	False	AGTAAA	-15	NA	144355443	144299198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144300537_144343186_144343299_144355337
transcript_8841.known	chr1	-	1652	4	FSM	ENSG00000117477.13	ENST00000491570.2	1652	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.2713462342761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAACTATCAATTCGTT	-169427173	True	NA	NA	False	AATAAA	-40	NA	169427474	169418785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169419160_169421362_169422314_169424810_169424951_169427287
transcript_88412.nic	chr7	-	2255	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	25	1720	combination_of_known_junctions	FALSE	canonical	3	172	junction_2	173.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355049	False	NA	NA	False	AATGAA	-18	NA	144355194	144335047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_144336978_144343186_144343299_144354981
transcript_88414.known	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	176.289013629695	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	144344241	True	NA	12	True	AATAAA	-20	NA	144355401	144380632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
transcript_88416.known	chr7	-	2439	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.10653744329409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCCTGAAGCTTAG	-144836040	False	NA	NA	False	AATAAA	-22	NA	144836053	144451940	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_88417.known	chr7	-	521	2	FSM	ENSG00000196511.15	ENST00000548460.2	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTTTTAAATCTA	-144835654	True	NA	NA	False	AATAAA	-18	NA	144835999	144835130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144835619_144835966
transcript_88418.known	chr7	+	6076	4	FSM	ENSG00000174469.23	ENST00000463592.3	6076	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	18.1536650722535	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTTCGTGTTTTGTA	NA	False	NA	25	True	AATAAA	-31	NA	148339460	148420998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148339634_148383648_148383889_148409390_148409472_148415416
transcript_88419.known	chr7	+	3086	22	FSM	ENSG00000055130.18	ENST00000662716.1	3086	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	122.473505858158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	NA	False	NA	4	True	NA	NA	NA	148698071	148800988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148698260_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88420.known	chr7	+	2857	22	FSM	ENSG00000055130.18	ENST00000409469.5	2857	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127.757920176404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTGGAAGGGTCTGAC	NA	False	NA	NA	False	NA	NA	NA	148697913	148800582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148698279_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88423.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	113.574633078481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	148698484	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88426.known	chr7	+	3147	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	53.5740740087562	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTAGTGTCTTCCTGT	148692683	True	NA	24	True	AATAAA	-25	NA	148698902	148801110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88434.nic	chr7	+	1807	2	ISM	ENSG00000055130.18	ENST00000655324.1	2887	21	-34	69411	-25	-28914	5prime_fragment	FALSE	canonical	3	455	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCAGTGGTTTTTAG	148698785	False	NA	3	True	CATAAA	-21	NA	148698831	148731570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_148699030_148729961
transcript_88435.known	chr7	+	3056	22	FSM	ENSG00000055130.18	ENST00000662670.1	3056	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.306517208896	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	148692703	True	NA	8	True	AATAAA	-13	NA	148698922	148801024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756967_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88436.known	chr7	-	2591	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	54.9116136947327	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-148877897	True	NA	-20	True	AATAAA	-16	NA	148884245	148807384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_88438.known	chr7	-	2477	19	FSM	ENSG00000106462.12	ENST00000350995.6	2477	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	76.496913517983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-148877900	True	NA	-20	True	AATAAA	-16	NA	148884248	148807384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
transcript_88439.known	chr7	+	96	1	FSM	ENSG00000252316.1	ENST00000516507.1	96	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTGATTTTGTATTTC	NA	False	NA	49	True	ACTAAA	-43	NA	148963314	148963410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148963300_148963400
transcript_8844.known	chr1	+	1295	3	FSM	ENSG00000117475.14	ENST00000367807.7	1295	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGTGTCTTCATTGTA	169367583	True	NA	NA	False	AATAAA	-17	NA	169367969	169377383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169368343_169369472_169369551_169376539
transcript_88440.known	chr7	-	113	1	FSM	ENSG00000201098.1	ENST00000364228.1	113	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAGTTTCCACTCTCCT	-148987194	True	NA	NA	False	NA	NA	NA	148987248	148987135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148987100_148987200
transcript_88442.known	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	1143.39631615747	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-149028648	False	NA	-23	True	AATAAA	-14	NA	149028662	149003067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
transcript_88449.known	chr7	-	3198	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5.8878405775519	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCCATGTGTTCTTT	-149126304	False	NA	-6	True	AATAAA	-28	NA	149126324	149102783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
transcript_8845.known	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-169427161	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169422314_169424810_169424931_169427287
transcript_88450.nnic	chr7	-	547	2	Antisense	novelGene_ENSG00000197024.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGACCTGCGAGAACAA	-149147110	False	NA	NA	False	NA	NA	NA	149147123	149145946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_149146353_149146982
transcript_88454.known	chr7	+	2807	5	FSM	ENSG00000170260.9	ENST00000335870.7	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	15.1554445662277	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	149238254	True	NA	6	True	AATAAA	-30	NA	149239650	149255606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149239803_149250158_149250549_149250680_149250808_149252705_149252796_149253558
transcript_88455.nic	chr7	+	1132	5	ISM	ENSG00000133619.18	ENST00000496259.6	3827	17	45	12535	45	0	5prime_fragment	FALSE	canonical	3	14	junction_1	14.0890028036054	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCATTTAGCTGTGGTT	149713692	True	NA	9	True	AATAAA	-21	NA	149714995	149722040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382
transcript_88456.known	chr7	+	1666	4	FSM	ENSG00000171130.19	ENST00000479613.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	78.4063489492755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTACTGTTTGGTGA	149870941	True	NA	26	True	AATAAA	-12	NA	149873975	149880689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149874170_149875597_149875646_149878677_149878747_149879334
transcript_88457.known	chr7	+	1723	4	FSM	ENSG00000171130.19	ENST00000425642.3	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	5.43650214343336	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTGGTGACAAAGC	149870934	True	NA	32	True	AATAAA	-18	NA	149873968	149880695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879334
transcript_88459.known	chr7	+	893	3	FSM	ENSG00000171130.19	ENST00000606024.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	80	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGATGTCTTCCCTC	149870952	True	NA	NA	False	NA	NA	NA	149873986	149879996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149874170_149875597_149875646_149879334
transcript_8846.nic	chr1	+	2914	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.1651054133854	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAGTGAAAATAATCT	169792089	True	NA	8	True	TATAAA	-18	NA	169795022	169853085	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_88464.known	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	1941	junction_5	117.264828486635	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	-150315856	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_88466.nic	chr7	-	745	6	NIC	ENSG00000106538.10	novel	685	6	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_5	821.804502299665	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	-150315948	True	NA	-15	True	AATAAA	-13	NA	150341721	150338328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341609
transcript_88474.known	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	895.027792864557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-150315889	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_88477.known	chr7	+	1815	3	FSM	ENSG00000127399.15	ENST00000359623.9	1815	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	13.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTGGCATTTCATG	150320821	True	NA	21	True	ATTAAA	-21	NA	150323354	150338156	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_150323561_150325840_150326011_150336717
transcript_88479.known	chr7	-	1618	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	115.371952830833	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCCATGATAATAAAGCT	-150315870	True	NA	-44	True	NA	NA	NA	150341643	150338357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
transcript_88480.known	chr7	-	1907	4	FSM	ENSG00000106538.10	ENST00000478771.2	1907	4	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	43.7442059655397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTTGCACGACTT	-150315887	True	NA	-3	True	AATAAA	-25	NA	150341660	150338316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099
transcript_88481.known	chr7	-	1157	8	FSM	ENSG00000106526.11	ENST00000683684.1	1157	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.6409614267233	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTTTGTTTTTCTCA	-150323455	True	NA	NA	False	AATAAA	-16	NA	150323545	150247211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150247570_150248947_150249055_150284752_150284846_150286366_150286541_150289449_150289594_150293311_150293420_150295251_150295348_150323468
transcript_88482.known	chr7	+	582	3	FSM	ENSG00000284048.2	ENST00000483664.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCCAGATGTGAATG	150377387	True	NA	NA	False	NA	NA	NA	150379328	150410597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_150379393_150388421_150388502_150410159
transcript_88485.known	chr7	+	652	3	FSM	ENSG00000002933.9	ENST00000481305.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGGTTCTCGCTTAGT	NA	False	NA	NA	False	AATAAA	-15	NA	150803303	150805112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_150803457_150803619_150803833_150804826
transcript_88488.known	chr7	+	1111	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.41872261435249	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGATTCAGCATTAT	151010423	True	NA	NA	False	NA	NA	NA	151010532	151014289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_88492.known	chr7	-	689	2	FSM	ENSG00000181652.20	ENST00000404733.2	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATGGTCAAGTTGGGA	-151014292	False	NA	NA	False	NA	NA	NA	151014304	151013294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151013409_151013729
transcript_88493.known	chr7	+	4656	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	10.0111049451208	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	151027181	True	NA	13	True	AATAAA	-20	NA	151028449	151047782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_88496.known	chr7	+	1994	15	FSM	ENSG00000197150.13	ENST00000482309.5	1994	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.6258773562732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGCCTACTGGGGACT	151027157	True	NA	NA	False	GGGGCT	-7	NA	151028425	151045409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_88498.known	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	22.7341044726384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	151027198	True	NA	18	True	CATAAA	-29	NA	151028466	151037570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
transcript_88499.nic	chr7	+	1617	10	NIC	ENSG00000197150.13	novel	1596	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	24.9977776790036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAAGGGTGAAGACCCG	151027150	True	NA	34	True	AGTAAA	-16	NA	151028418	151037586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037283
transcript_88504.known	chr7	+	4119	23	FSM	ENSG00000164889.15	ENST00000413384.7	4119	23	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	49.1571312600624	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	151054577	True	NA	2	True	AGTAAA	-16	NA	151059588	151076523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_88509.known	chr7	-	1122	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.1518761102435	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGATGTGGTGGTC	-151055184	True	NA	-8	True	CATAAA	-18	NA	151057897	151053814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_88514.known	chr7	-	783	11	FSM	ENSG00000164885.13	ENST00000297518.4	783	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.9116100522982	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGACCCCCGGCCTC	-151055135	True	NA	NA	False	NA	NA	NA	151057848	151054008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_88519.known	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_9	56.5921078125446	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	-151071359	False	9450	28	True	ATTAAA	-16	NA	151080809	151076623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_88520.known	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	130.256157883866	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071412	False	9450	26	True	ATTAAA	-14	NA	151080862	151076625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
transcript_88523.known	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	138.739357699969	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071392	False	9450	26	True	ATTAAA	-14	NA	151080842	151076625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
transcript_88526.known	chr7	-	1826	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_8	59.8560773856757	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAAGTTCCTTTCCTTC	-151071340	False	9450	6	True	NA	NA	NA	151080790	151076645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_88528.nic	chr7	-	1870	9	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	324	junction_8	51.9903837262238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071364	False	9450	26	True	ATTAAA	-14	NA	151080814	151076625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_151076833_151076912_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_88529.nnic	chr7	-	1749	9	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	127.573263264683	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071431	False	NA	26	True	ATTAAA	-14	NA	151080881	151076625	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_151076833_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_8853.nic	chr1	+	864	8	NIC	ENSG00000000460.17	novel	755	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.0774625810738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATATAATTACTAGCTTG	169792089	True	NA	NA	False	AATAAA	-18	NA	169795022	169807837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790
transcript_8854.nic	chr1	+	878	6	NIC	ENSG00000000460.17	novel	782	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	64.4627023944854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTGTAAAATTTA	169792089	True	NA	NA	False	AATAAA	-16	NA	169795022	169804386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074
transcript_8855.known	chr1	+	782	6	FSM	ENSG00000000460.17	ENST00000496973.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9779456000221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTAAATCTTACCAAA	169792109	True	NA	NA	False	ATTAAA	-2	NA	169795042	169804347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111
transcript_88561.known	chr7	-	4527	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_14	40.4058492431631	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	-151222323	True	NA	-2	True	AATACA	-15	NA	151227205	151211483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
transcript_88563.known	chr7	+	3107	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_12	126.441101074043	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	151336348	True	NA	16	True	AATAAA	-23	NA	151341771	151378449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
transcript_88565.known	chr7	+	3109	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	137.027946650548	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	151336388	True	NA	16	True	AATAAA	-23	NA	151341811	151378449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_88574.known	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_8	95.4502488210481	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	151336380	True	NA	22	True	AATAAA	-28	NA	151341803	151361249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_88577.nic	chr7	+	1802	9	NIC	ENSG00000013374.17	novel	1703	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	136.516253611063	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	151336400	True	NA	22	True	AATAAA	-28	NA	151341823	151361249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_88585.known	chr7	+	704	4	FSM	ENSG00000243836.6	ENST00000480632.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	151409186	True	NA	18	True	AATAAA	-33	NA	151409235	151413048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151409383_151411669_151411793_151411966_151412071_151412718
transcript_88588.known	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	2151	junction_6	110.51105771619	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	-151519883	False	NA	-3	True	AATAAA	-19	NA	151519895	151466011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
transcript_88589.known	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	798.113208685053	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
transcript_8859.known	chr1	-	1426	2	FSM	ENSG00000171806.12	ENST00000303469.6	1426	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	-169793538	False	1151	-12	True	AATAAA	-16	NA	169794689	169792528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169793898_169794632
transcript_88592.known	chr7	-	2318	12	FSM	ENSG00000106617.15	ENST00000418337.6	2318	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	19.0826822100715	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	-151632342	False	65	1	True	ATTAAA	-21	NA	151632353	151556123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_88594.known	chr7	+	1064	2	FSM	ENSG00000239911.3	ENST00000467458.3	1076	2	6	6	6	0	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGCCTTTTTTTAA	151877447	True	NA	12	True	ATTAAA	-23	NA	151877464	151879223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151877867_151878561
transcript_88595.known	chr7	+	2739	12	FSM	ENSG00000178234.13	ENST00000430044.7	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	27.1067677804664	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021880	True	NA	13	True	AATAAA	-16	NA	152025673	152122340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_88596.nnic	chr7	-	1649	4	NNC	ENSG00000196584.3	novel	4771	3	NA	NA	-27	-3268	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	52.2834156837094	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGGCTGTTGAATC	-152668910	True	NA	-20	True	AGTAAA	-15	NA	152676168	152648046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_152649364_152657110_152657233_152660700_152660783_152676040
transcript_88597.known	chr7	-	4771	3	FSM	ENSG00000196584.3	ENST00000359321.2	4771	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGATGTCTTTTGTTT	-152668883	True	NA	-28	True	TATAAA	-1	NA	152676141	152644775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_152649364_152660700_152660783_152676040
transcript_8860.known	chr1	-	1462	2	FSM	ENSG00000171806.12	ENST00000310392.5	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	-169793756	True	NA	-12	True	AATAAA	-16	NA	169794907	169792528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169793898_169794814
transcript_88602.nnic	chr7	-	1447	2	NIC	ENSG00000196584.3	novel	4771	3	NA	NA	-21	-3260	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTTGAATCAAAGTGAT	-152668904	True	NA	-12	True	AGTAAA	-23	NA	152676162	152648038	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_152649364_152676040
transcript_88603.known	chr7	+	2213	12	FSM	ENSG00000133627.18	ENST00000256001.13	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	45.6119094205859	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGTAGTGTGGTGG	152754643	True	NA	20	True	AATAAA	-26	NA	152759751	152855378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_88605.known	chr7	-	3711	21	FSM	ENSG00000157212.19	ENST00000397192.5	3711	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	42.0440245457068	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGAGTAATCCTTTAT	-155001281	True	NA	-10	True	AATAAA	-16	NA	155002972	154943690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_88606.nnic	chr7	+	972	3	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	-10	-835	multi-exon	FALSE	canonical	0	0	junction_1	39	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGGTTGTTTTAGT	155001830	True	NA	24	True	AATATA	-22	NA	155003437	155004868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr7_+_155003709_155003961_155004135_155004340
transcript_88608.known	chr7	-	1624	1	FSM	ENSG00000273117.1	ENST00000609974.1	1624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTCTGACTCTGT	-155297519	False	NA	-5	True	AATAAA	-16	NA	155297541	155295917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_155295900_155297500
transcript_88609.known	chr7	+	1320	6	FSM	ENSG00000186480.13	ENST00000476756.1	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	200.725683458794	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCCACACTGCGATATA	155292843	False	NA	NA	False	AATGAA	-8	NA	155298560	155308960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155303824_155303896_155308240
transcript_8861.known	chr1	-	850	2	FSM	ENSG00000171806.12	ENST00000454472.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGGGAAAAAAGTCT	-169793812	True	NA	NA	False	NA	NA	NA	169794963	169793141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169793898_169794869
transcript_88611.known	chr7	+	1404	6	FSM	ENSG00000184863.11	ENST00000287912.7	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	11.2142766151009	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTCTGTGGC	155644265	True	NA	NA	False	AATAAA	-24	NA	155644450	155701183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772
transcript_88613.known	chr7	-	1356	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGTCTCAGTAATGAT	-155643897	True	NA	-2	True	AATAAA	-16	NA	155644377	155641915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_155642971_155643467_155643605_155644213
transcript_88623.known	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-156639923	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
transcript_88624.known	chr7	-	2227	5	FSM	ENSG00000182648.14	ENST00000651649.1	2227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6393596310755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATATACCAAAAAAAAAA	-156639955	True	NA	NA	False	NA	NA	NA	156640599	156388921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156389184_156441229_156441381_156471154_156472712_156605187_156605381_156640535
transcript_88625.known	chr7	-	545	2	FSM	ENSG00000182648.14	ENST00000435354.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACAATTATTGTGTT	-156639919	True	NA	-8	True	AGTAAA	-20	NA	156640563	156639431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156639949_156640535
transcript_88626.known	chr7	-	640	4	FSM	ENSG00000182648.14	ENST00000418309.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCATGCATTTTTATT	-156639937	True	NA	NA	False	ATTAAA	-17	NA	156640581	156603617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156603912_156605187_156605381_156605657_156605765_156640535
transcript_88627.known	chr7	-	1709	2	FSM	ENSG00000182648.14	ENST00000664734.1	1709	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACTCACCCTGAATT	-156639923	True	NA	NA	False	AATAAA	-18	NA	156640567	156619945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156621623_156640535
transcript_88628.known	chr7	+	1679	9	FSM	ENSG00000105982.17	ENST00000317955.10	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.34877322383367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAATTTTAATGTCTTA	156640600	True	NA	NA	False	AATAAA	-42	NA	156640773	156677130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
transcript_88632.known	chr7	+	904	4	FSM	ENSG00000105982.17	ENST00000469382.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.59966329107444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	156640575	True	NA	NA	False	ATTAAA	-21	NA	156640748	156654921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_156640956_156643800_156643893_156644498_156644758_156654575
transcript_88634.known	chr7	+	6082	11	FSM	ENSG00000146909.8	ENST00000275820.4	6082	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	9.73858305915188	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGTAACAGTGAATGT	156946407	True	NA	10	True	AATAAA	-20	NA	156949711	156973176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007_156963176_156963904_156964027_156966269_156966403_156966960_156967093_156969086_156969197_156969528
transcript_88637.known	chr7	+	2489	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	1378	junction_8	856.898671567026	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	157327664	True	NA	103	True	AATAAA	-21	NA	157337003	157417439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
transcript_8864.known	chr1	-	6308	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.08903842071052	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATAAATCAGTTTTAT	-169893406	True	NA	1	True	ATTAAA	-16	NA	169893896	169849630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_88643.known	chr7	+	852	8	FSM	ENSG00000105993.15	ENST00000417758.5	852	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1197.17642298665	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGTAAGGAGCAGCTG	157327670	True	NA	NA	False	AAGAAA	-43	NA	157337009	157385605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157337151_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540
transcript_88652.known	chr7	+	1159	7	FSM	ENSG00000105993.15	ENST00000443280.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	1382.9424749023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGGCTTTCTGTGGCG	157327685	True	NA	NA	False	NA	NA	NA	157337024	157416475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157409794_157410002_157416015
transcript_88656.known	chr7	+	1543	1	FSM	ENSG00000280266.1	ENST00000624122.1	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCGCTCATTATGAGGG	NA	False	NA	NA	False	AATAAA	-18	NA	157525782	157527325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157525800_157527300
transcript_88659.nic	chr7	-	1983	3	ISM	ENSG00000155093.19	ENST00000389416.8	4692	22	1018631	-5	52429	0	3prime_fragment	FALSE	canonical	3	25	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGGTCTTTATTTGG	-157568985	True	NA	1	True	ATTAAA	-15	NA	157569080	157539055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_157540786_157548945_157549020_157568901
transcript_88662.known	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_28	156.934325923493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693610	True	NA	-4	True	AATAAA	-12	NA	158704804	158631313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_88665.known	chr7	-	4049	28	FSM	ENSG00000146918.20	ENST00000356309.8	4049	28	0	0	0	0	multi-exon	TRUE	canonical	3	550	junction_27	63.5442448711245	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACCAAAAATACAAAAT	-158693610	True	NA	NA	False	NA	NA	NA	158704804	158631168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_8867.known	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_18	6.89453595528961	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-170074587	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
transcript_88670.nic	chr7	-	3786	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_4	119.502896649798	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693633	True	NA	-4	True	AATAAA	-12	NA	158704827	158631313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_88672.nic	chr7	-	490	4	ISM	ENSG00000146918.20	ENST00000409339.3	5253	28	-29	53081	-23	535	5prime_fragment	FALSE	canonical	3	550	junction_3	53.1057644914582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCTACTGGAATGTG	-158693633	True	NA	NA	False	AATAAA	-16	NA	158704827	158692876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_158692957_158693308_158693498_158701821_158701939_158704723
transcript_88673.known	chr8	+	714	6	FSM	ENSG00000172748.14	ENST00000522866.5	714	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.74355957741627	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACGAAACACTTTGTAA	232289	True	NA	NA	False	NA	NA	NA	232383	245248	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_232625_240823_240908_242886_243014_243721_243806_244618_244702_245153
transcript_88674.known	chr8	-	370	3	FSM	ENSG00000223508.5	ENST00000606507.1	370	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCCTCTGACGGTTTT	-231996	True	NA	NA	False	AATAAA	-13	NA	232231	230007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_230171_230803_230908_232128
transcript_88675.known	chr8	+	10356	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	12.2877033786216	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	406109	True	NA	5	True	ATTAAA	-16	NA	406957	477967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_88677.known	chr8	+	2360	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	21.821720830402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	406807	469871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_88685.nnic	chr8	-	2009	7	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	147.368774017957	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-726183	True	NA	NA	False	ATTAAA	-18	NA	731252	664199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_664677_668597_668793_672021_672205_673288_674048_692477_692613_715860_716008_731139
transcript_88695.known	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	52.7658980782096	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-726155	True	NA	NA	False	ATTAAA	-18	NA	731224	664199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_8870.known	chr1	+	2467	7	FSM	ENSG00000120370.14	ENST00000498166.6	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.2833766335744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAATATCACATTAT	170530709	True	NA	19	True	AATAAA	-21	NA	170532150	170553446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_170532285_170533463_170533652_170536309_170536422_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_88703.nic	chr8	-	578	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-28	9665	-28	0	5prime_fragment	FALSE	canonical	3	278	junction_1	35.5933826558939	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	-726183	True	NA	NA	False	AATAAA	-5	NA	731252	673864	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_88704.nic	chr8	-	457	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-28	9786	-28	-121	5prime_fragment	FALSE	canonical	3	278	junction_1	35.5933826558939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCCCAATAATGT	-726183	True	NA	NA	False	CATAAA	-13	NA	731252	673985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_88711.nnic	chr8	+	617	3	NNC	ENSG00000198010.13	novel	10418	15	NA	NA	8434	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTTCTGCCTGAC	NA	False	NA	22	True	ATTAAA	-19	NA	891761	1032931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_891978_907911_907967_1032585
transcript_88715.known	chr8	+	1305	4	FSM	ENSG00000182372.10	ENST00000520991.3	1305	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	41.9867704031745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTCAGTTTAGCCGC	1761491	True	NA	21	True	AAGAAA	-25	NA	1763831	1780772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1770931_1771598_1772923_1772986_1780249
transcript_88717.nnic	chr8	+	1841	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-30	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.8578375602536	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	NA	False	NA	20	True	AATAAA	-15	NA	1763729	1782742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_1763886_1770931_1771598_1780249_1780882_1782355
transcript_88719.known	chr8	+	1958	4	FSM	ENSG00000182372.10	ENST00000635970.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.8578375602536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTTTACAGAACCCAAA	1761474	True	NA	-9	True	AATAAA	-6	NA	1763814	1782681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1770931_1771598_1780249_1781145_1782355
transcript_88720.nnic	chr8	+	2108	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-29	61	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	53.8578375602536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	NA	False	NA	20	True	AATAAA	-15	NA	1763730	1782742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_1763886_1770931_1771598_1780249_1781150_1782355
transcript_88722.known	chr8	+	2001	4	FSM	ENSG00000182372.10	ENST00000637083.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.4541605780879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCTCTCAAAAAAAAAAAA	1761474	True	NA	NA	False	NA	NA	NA	1763814	1781357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1765067_1765224_1770931_1771598_1780249
transcript_88731.known	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	1761448	True	NA	10	True	AATATA	-43	NA	1763788	1786570	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1770931_1771598_1780249
transcript_88733.known	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1761419	True	NA	NA	False	NA	NA	NA	1763759	1781300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763812_1770931_1771598_1780249
transcript_88735.known	chr8	+	1897	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	1761459	True	NA	NA	False	NA	NA	NA	1763799	1781354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763926_1770931_1771598_1780249
transcript_88737.known	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	58	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	1761436	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763942_1770931_1771598_1780249
transcript_8874.known	chr1	+	2540	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	19.4036079119323	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	170530724	True	NA	NA	False	AATAAA	-14	NA	170532165	170553834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_88740.known	chr8	-	579	2	FSM	ENSG00000253982.3	ENST00000518481.2	621	2	42	0	36	0	multi-exon	FALSE	canonical	3	99	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGTGGGAAAACGTTG	-1763285	False	NA	-20	True	AATAAA	-27	NA	1763297	1762624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_1762929_1763022
transcript_88741.known	chr8	+	8008	14	FSM	ENSG00000147316.15	ENST00000344683.10	8008	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	45.272612774785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTCTCACTCTGGAA	6404369	True	NA	NA	False	AATAAA	-27	NA	6406626	6648508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392_6445548_6455142_6455253_6477593_6477632_6480713_6480877_6499851_6499930_6621453_6621692_6642993
transcript_88742.known	chr8	+	3773	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	19.9407284987591	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	6404334	True	NA	27	True	AATAAA	-31	NA	6406591	6447419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
transcript_88749.known	chr8	-	2413	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGATTTTGGAG	-6405515	True	NA	NA	False	AATAAA	-25	NA	6406548	6403550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6405121_6405705
transcript_88752.nnic	chr8	-	1121	2	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6407216	False	NA	-3	True	AATAAA	-15	NA	6407236	6405405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_6406372_6407081
transcript_88753.known	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6405509	True	NA	-3	True	AATAAA	-15	NA	6406542	6405405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6405400_6406500
transcript_88757.nnic	chr8	-	1144	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	-3	-20633	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATGCTTGAGTCTTC	-6707681	True	NA	0	True	ATTAAA	-30	NA	6708227	6687925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_6688983_6708140
transcript_88758.nnic	chr8	-	402	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	-3	-21375	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAATCTCTCTCTCTCT	-6707681	True	NA	NA	False	NA	NA	NA	6708227	6688667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_6688983_6708140
transcript_88760.known	chr8	+	5237	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_2	53.0575351935644	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	6706906	True	NA	13	True	AATAAA	-22	NA	6708641	6761503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_88766.known	chr8	+	852	3	FSM	ENSG00000155189.12	ENST00000518327.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	414.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTGCATTTTTGAGC	6708582	True	NA	NA	False	NA	NA	NA	6708692	6757695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6708888_6755050_6755175_6757162
transcript_88767.nic	chr8	+	327	2	ISM	ENSG00000155189.12	ENST00000285518.11	5237	8	-52	36605	-52	-5845	5prime_fragment	FALSE	canonical	3	958	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAATATAATATATT	6701009	False	NA	NA	False	NA	NA	NA	6708589	6724898	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_6708888_6724869
transcript_88768.nnic	chr8	+	1360	2	NIC	ENSG00000155189.12	novel	852	3	NA	NA	-29	-20178	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGAGTTTCTTGTTCCTG	6708183	True	NA	-1	True	AATAAA	-10	NA	6708612	6710565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_6708888_6709480
transcript_88769.known	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	3.02305952453618	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-6834889	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
transcript_88773.nnic	chr8	+	850	3	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-170	-108521	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	8065452	False	NA	NA	False	AATAAA	-26	NA	8065475	8072006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_8065817_8070775_8070973_8071694
transcript_88774.nnic	chr8	+	633	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-150	-108521	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	8065472	False	NA	NA	False	AATAAA	-26	NA	8065495	8072006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_8065817_8071694
transcript_88795.known	chr8	+	2107	8	FSM	ENSG00000104626.15	ENST00000519292.5	2107	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	53.5041482275068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	8999609	True	NA	8	True	AATAAA	-14	NA	9002843	9033338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791_9030082_9032548
transcript_88797.known	chr8	+	4521	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	12.1209185570511	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	8999662	True	NA	8	True	AATAAA	-14	NA	9002896	9033338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
transcript_88800.known	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	-9148777	False	1881	NA	False	AATAAA	-17	NA	9150658	9136254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9141669_9150562
transcript_88803.known	chr8	+	439	3	FSM	ENSG00000248538.9	ENST00000521718.3	550	3	104	7	8	-1	multi-exon	FALSE	canonical	3	16	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGGAAATCATAAGG	9151783	False	NA	NA	False	AATAAA	-20	NA	9151799	9156362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_9151917_9154965_9155077_9156151
transcript_88804.nic	chr8	+	595	3	ISM	ENSG00000248538.9	ENST00000517816.1	826	4	-78	11777	18	0	5prime_fragment	FALSE	canonical	2	5	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCTTAAGGAAATCATA	NA	False	NA	NA	False	AATAAA	-17	NA	9151713	9156359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_9151917_9154965_9155150_9156151
transcript_88806.nnic	chr8	-	362	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-880	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	97.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGGAAGTCATCAAAAT	-9180730	True	NA	-4	True	AATAAA	-25	NA	9183399	9180250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_9180523_9182463_9182516_9183361
transcript_88808.known	chr8	-	328	2	FSM	ENSG00000253252.2	ENST00000521298.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGGAAGTCATCAAAAT	-9182480	False	NA	-4	True	AATAAA	-25	NA	9182519	9180250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9180523_9182463
transcript_88809.known	chr8	-	2903	3	FSM	ENSG00000253230.10	ENST00000665174.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9900199_9900554_9900613_9900688
transcript_88810.known	chr8	-	3001	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	66.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9900287_9900544_9900613_9900688
transcript_88811.known	chr8	-	3111	3	FSM	ENSG00000253230.10	ENST00000667251.1	3111	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGGACTTCAAACG	-9903356	False	NA	NA	False	AAGAAA	-39	NA	9903398	9899943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9900287_9900554_9900613_9900688
transcript_88812.nnic	chr8	+	861	7	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1289	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.7366487830285	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	10057370	True	NA	NA	False	AGTAAA	-16	NA	10057680	10428365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_10057784_10069487_10069627_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_88813.nnic	chr8	+	1381	7	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1289	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.7366487830285	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	10057370	True	NA	6	True	AATAAA	-18	NA	10057680	10428885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_10057784_10069487_10069627_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_88815.nnic	chr8	+	683	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1250	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.1508620323596	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	10057409	True	NA	NA	False	AGTAAA	-16	NA	10057719	10428365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_88816.nnic	chr8	+	1203	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1250	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.1508620323596	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	10057409	True	NA	6	True	AATAAA	-18	NA	10057719	10428885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_8882.known	chr1	+	1931	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.5871317979271	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	171470369	True	NA	-25	True	AAAAAG	-9	NA	171485550	171532792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_88820.known	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	27.697272228306	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	-10833492	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_88825.known	chr8	-	1272	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	77.7395652161755	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCAGCAAGAGAGTTT	-10833493	True	NA	-10	True	AATAAA	-19	NA	10839876	10765158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_88828.nnic	chr8	-	1512	3	NNC	ENSG00000171044.11	novel	3163	3	NA	NA	64054	-1655	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTTTGTTTTTTACA	-10938207	True	NA	NA	False	AGTAAA	-14	NA	10938427	10897699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_10898917_10924633_10924831_10938329
transcript_88831.nnic	chr8	-	443	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	463	-86	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	13	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	-11200348	False	NA	-9	True	ATTAAA	-21	NA	11200371	11111730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_11111893_11114020_11114093_11200162
transcript_88832.known	chr8	+	707	1	FSM	ENSG00000270076.1	ENST00000602443.1	707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGGTGCAATTAATT	11202928	False	NA	12	True	AATAAA	-25	NA	11202964	11203671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11203000_11203700
transcript_88833.known	chr8	+	3503	11	FSM	ENSG00000104643.10	ENST00000530200.1	3503	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	47.1677856168805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACAGCCTCACTTTTT	11283739	True	NA	76	True	NA	NA	NA	11284826	11324527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11285071_11295193_11295303_11297899_11297952_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_88834.known	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_9	15.8939385915077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	11283728	True	NA	21	True	AATAAA	-33	NA	11284815	11328146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_88839.known	chr8	+	1960	10	FSM	ENSG00000104643.10	ENST00000526292.1	1960	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.9327049017267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCATTTGTGTTTCATG	11284006	False	NA	-2	True	AATAGA	-11	NA	11285093	11323057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11285317_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_8884.nic	chr1	+	2028	12	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-61	60719	-61	0	5prime_fragment	FALSE	canonical	3	24	junction_5	10.7180237477742	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	NA	False	NA	-25	True	AAAAAG	-9	NA	171485468	171532792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_88844.known	chr8	+	1421	8	FSM	ENSG00000154316.16	ENST00000534302.5	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.88441513689613	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	11347530	True	NA	6	True	ATTAAA	-17	NA	11347644	11366088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361634_11361808_11364719_11364990_11365582
transcript_88848.known	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	66.1350134195193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	11768232	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_88849.known	chr8	+	2226	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_1	41.105808591974	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	NA	False	NA	17	True	AATAAA	-17	NA	11769638	11787345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_88850.known	chr8	+	2699	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	40.7246853885945	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768243	True	NA	17	True	AATAAA	-17	NA	11769709	11787345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_88851.known	chr8	+	2016	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	91.1604202613295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768242	True	NA	17	True	AATAAA	-17	NA	11769708	11787345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
transcript_88852.known	chr8	+	554	4	FSM	ENSG00000154328.16	ENST00000528113.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.4998316496599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAAGGCAGACCGCAG	11768243	True	NA	NA	False	NA	NA	NA	11769709	11786097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11769792_11771445_11771586_11783202_11783400_11785962
transcript_88855.known	chr8	+	1773	9	FSM	ENSG00000079459.13	ENST00000525607.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1690.16707753997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	11757494	True	NA	NA	False	NA	NA	NA	11802740	11838839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_88857.known	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	1313.43512848359	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	11757519	True	NA	-42	True	NA	NA	NA	11802765	11838905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_88875.known	chr8	+	1558	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1729.16907429551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	11802620	False	NA	43	True	TTTAAA	-29	NA	11802642	11839210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
transcript_8889.nic	chr1	+	1429	10	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-61	68641	-61	0	5prime_fragment	FALSE	canonical	3	24	junction_5	9.17726659862414	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGAAGTTTCCAACACT	NA	False	NA	NA	False	AAAAAG	-4	NA	171485468	171524870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820
transcript_88907.known	chr8	+	642	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	11757537	True	NA	-15	True	AATAAA	-3	NA	11802783	11803815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11803321
transcript_88908.known	chr8	+	2035	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	3358	junction_3	338.434812702505	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	11757494	True	NA	11	True	AATAAA	-19	NA	11802740	11839298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_88909.known	chr8	+	2462	9	FSM	ENSG00000079459.13	ENST00000615631.4	2462	9	0	0	0	0	multi-exon	FALSE	canonical	2	136	junction_1	1286.96881639572	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	NA	False	NA	17	True	AATAAA	-25	NA	11795572	11839304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11796012_11802758_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_8891.known	chr1	+	717	5	FSM	ENSG00000117523.18	ENST00000467601.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.3299474867683	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTACTTTCTCTTTA	171470414	True	NA	NA	False	NA	NA	NA	171485595	171515859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733
transcript_88911.known	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	177.235323792973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	-11862864	True	NA	-39	True	NA	NA	NA	11868137	11842559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_88912.known	chr8	-	3733	10	FSM	ENSG00000164733.22	ENST00000353047.11	3733	10	0	0	0	0	multi-exon	TRUE	canonical	3	395	junction_3	32.438355593036	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	-11862814	True	NA	-3	True	AATAAA	-19	NA	11868087	11842523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_88913.known	chr8	-	1988	10	FSM	ENSG00000164733.22	ENST00000677865.1	1988	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	145.849237228036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTCCAACTTGAAGT	-11862817	True	NA	-28	True	AATAAA	-1	NA	11868090	11844335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849229_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_88914.known	chr8	-	3128	9	FSM	ENSG00000164733.22	ENST00000677047.1	3128	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	149.381851307312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTGCAGTGAGCCAAGA	-11862863	True	NA	NA	False	NA	NA	NA	11868136	11843033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_88915.known	chr8	-	1957	10	FSM	ENSG00000164733.22	ENST00000453527.7	1957	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	144.855824448115	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGATGGGATCTCAGATC	-11862830	True	NA	-5	True	AATAAA	-24	NA	11868103	11844312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845787_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_88916.known	chr8	-	2039	11	FSM	ENSG00000164733.22	ENST00000345125.8	2039	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	181.977031517717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTTTCTCCAACTTG	-11862817	True	NA	-32	True	NA	NA	NA	11868090	11844339	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11861360_11861480_11868000
transcript_8892.known	chr1	+	1919	12	NNC	ENSG00000117523.18	novel	1931	12	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.9104020524452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAAGAACTA	171470369	True	NA	-42	True	AAGAAA	-7	NA	171485550	171532775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517585_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_88921.known	chr8	-	2254	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.1223227551278	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-12194092	True	NA	NA	False	AATAAA	-17	NA	12194105	12182109	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
transcript_8893.known	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	41.1747419542612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	-171740486	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_88935.nic	chr8	-	666	2	ISM	ENSG00000283674.3	ENST00000636622.1	1014	6	4215	0	4215	0	3prime_fragment	FALSE	canonical	3	72	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	-12601224	True	NA	NA	False	AATAAA	-26	NA	12601511	12594984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_12595297_12601157
transcript_88939.known	chr8	+	1420	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTCTGACTTGTGCG	13566758	True	NA	NA	False	AATAAA	-22	NA	13566868	13568288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_13566900_13568300
transcript_88943.known	chr8	+	3683	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_9	43.0188015169021	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTTACTGCAGTTT	15535922	True	NA	105	True	NA	NA	NA	15540222	15766649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
transcript_88946.known	chr8	-	1840	3	FSM	ENSG00000078579.9	ENST00000180166.6	1840	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTTGGCTTCATTGC	NA	False	NA	NA	False	ATTAAA	-39	NA	17002345	16992180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_16993318_16995654_16995759_17001746
transcript_8895.known	chr1	-	4977	8	FSM	ENSG00000117533.15	ENST00000236192.12	4977	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.5917298853054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCACTTTGGCTTATTC	-171740491	True	NA	NA	False	AATAAA	-22	NA	171742065	171700159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_88955.known	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	100.045684009301	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	-17238342	True	NA	-33	True	AATAAA	-18	NA	17246857	17224965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_88963.known	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_3	102.868070848053	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-17238363	True	NA	0	True	ATTAAA	-17	NA	17246878	17231569	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_88972.nic	chr8	-	1182	4	ISM	ENSG00000003987.14	ENST00000521857.5	2158	13	-41	58828	-17	12516	5prime_fragment	FALSE	canonical	3	17	junction_3	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAACCCACCATCCCAT	-17412505	True	NA	NA	False	NA	NA	NA	17413368	17360478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_17361275_17371036_17371200_17373117_17373241_17413268
transcript_88974.known	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	3.8829013735766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	-17412488	True	NA	-20	True	AATAAA	-19	NA	17413351	17296793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_88979.known	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	30.6963265360844	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	17242617	True	NA	5	True	AATAAA	-22	NA	17246957	17298024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_88982.known	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	99.6295638854251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	17242782	False	NA	NA	False	NA	NA	NA	17247122	17295052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_88986.nic	chr8	+	1710	11	ISM	ENSG00000155975.10	ENST00000324849.9	4519	12	-45	11413	-18	0	5prime_fragment	FALSE	canonical	3	266	junction_2	32.1801180855509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGGATATTTTCTGTG	17242572	True	NA	NA	False	TATAAA	-18	NA	17246912	17286611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346
transcript_88993.known	chr8	+	1508	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.63151361133557	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACTTAAAATACATCCA	17576597	True	NA	NA	False	AATAAA	-28	NA	17577215	17643144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
transcript_88999.known	chr8	+	6443	39	FSM	ENSG00000078674.19	ENST00000519253.5	6443	39	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_28	80.6126343348512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAGTTTAAAACATCAGA	17914816	False	NA	60	True	NA	NA	NA	17923027	18027803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
transcript_89.known	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	92	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_7552_7809_10553
transcript_89001.known	chr8	+	2171	11	FSM	ENSG00000078674.19	ENST00000518537.5	2171	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	57.8252539985775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACAGCCCTGAAATTGT	17914787	True	NA	NA	False	NA	NA	NA	17922998	17955955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469
transcript_89002.nic	chr8	+	1763	10	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-141	2832	-110	0	5prime_fragment	FALSE	canonical	3	61	junction_7	60.6528270742491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	17921915	False	NA	NA	False	AAGAAA	-5	NA	17922857	17953123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969
transcript_89006.nic	chr8	+	1695	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-219	74680	-159	0	5prime_fragment	FALSE	canonical	3	107	junction_6	37.4797862187073	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	17921866	False	NA	NA	False	AAGAAA	-5	NA	17922808	17953123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_89010.known	chr8	+	1426	8	FSM	ENSG00000078674.19	ENST00000523055.5	1426	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	76.149155461837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	17914798	False	NA	NA	False	AAGAAA	-5	NA	17923009	17953123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17923189_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_89011.nic	chr8	+	662	4	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-247	18783	-216	-149	5prime_fragment	FALSE	canonical	3	166	junction_2	19.6129209111409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAATAAGAAAAAGTT	17921809	True	NA	NA	False	AATAGA	-7	NA	17922751	17937172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133
transcript_89013.known	chr8	-	1960	14	FSM	ENSG00000104763.20	ENST00000635944.1	1960	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_13	292.232662435401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-18076416	True	NA	NA	False	NA	NA	NA	18084067	18056834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_89014.known	chr8	-	1989	14	FSM	ENSG00000104763.20	ENST00000636920.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	291.601454530021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-18076469	True	NA	NA	False	NA	NA	NA	18084120	18056834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083940
transcript_89015.known	chr8	-	3151	14	FSM	ENSG00000104763.20	ENST00000637244.1	3151	14	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	281.402699507202	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTCCTGACACTCA	-18084832	True	NA	-77	True	NA	NA	NA	18084980	18056492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_89016.known	chr8	-	2512	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	291.475779744244	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	-18084850	False	NA	-39	True	AATAAA	-14	NA	18084998	18056454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_89020.known	chr8	-	1975	13	FSM	ENSG00000104763.20	ENST00000636494.1	1975	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	254.355394412359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTAGCATTCATGTA	-18076475	True	NA	NA	False	TTTAAA	-4	NA	18084126	18056723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18075540_18075588_18083980
transcript_89023.known	chr8	-	2158	12	FSM	ENSG00000104763.20	ENST00000636701.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	208.29972841918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACTGGAAAGAGTG	-18076491	True	NA	-54	True	NA	NA	NA	18084142	18056469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18075540_18075588_18083980
transcript_89026.nnic	chr8	-	1112	6	NNC	ENSG00000104763.20	novel	929	5	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	393.487687227949	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18084212	False	NA	-3	True	AATAAA	-24	NA	18084360	18066762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_18067105_18067133_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_89028.nnic	chr8	-	988	6	NNC	ENSG00000104763.20	novel	929	5	NA	NA	-47	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	393.487687227949	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTCCTGTGTGATTT	-18084212	False	NA	-16	True	TATAAA	-16	NA	18084360	18066886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_18067105_18067133_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_8903.known	chr1	-	1193	8	FSM	ENSG00000117533.15	ENST00000367740.2	1193	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.0848127514248	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCAGTAAATATATTTT	-171740500	True	NA	NA	False	ACTAAA	-3	NA	171742074	171703949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719219_171728523_171728571_171738348_171738464_171741909
transcript_89031.known	chr8	-	929	5	FSM	ENSG00000104763.20	ENST00000637561.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	29.5338788512447	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076497	True	NA	-3	True	AATAAA	-24	NA	18084148	18066762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_89034.known	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	426.728470458675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076422	True	NA	-3	True	AATAAA	-24	NA	18084073	18066762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_89038.known	chr8	+	451	4	FSM	ENSG00000245281.8	ENST00000505114.6	451	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTGTAAAATAAATGC	18084833	True	NA	NA	False	AATAAA	-21	NA	18084867	18088211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18084940_18086882_18086937_18087024_18087138_18087999
transcript_89039.known	chr8	-	1634	4	FSM	ENSG00000104763.20	ENST00000637202.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	450.920786342297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACAATGTGTA	-18076426	True	NA	NA	False	TATAAA	-37	NA	18084077	18065895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18067299_18069791_18069879_18075540_18075588_18083980
transcript_89040.known	chr8	+	2412	3	FSM	ENSG00000245281.8	ENST00000665050.1	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCATTTGCTATCCTT	18084337	True	NA	NA	False	AATAAA	-3	NA	18084385	18097629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18084940_18086882_18086937_18095825
transcript_89041.known	chr8	-	2328	14	FSM	ENSG00000104763.20	ENST00000636160.1	2328	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	282.766510407941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAACAGTCACTGGA	-18076469	True	NA	-61	True	NA	NA	NA	18084120	18056476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071412_18075540_18075588_18083980
transcript_89042.known	chr8	+	2162	4	FSM	ENSG00000171428.15	ENST00000518029.5	2162	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	9.20144916122817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209737	True	NA	NA	False	AATAAA	-31	NA	18210129	18223689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18210181_18212390_18212775_18219410_18219490_18222041
transcript_89046.known	chr8	+	1799	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209716	True	NA	NA	False	AATAAA	-31	NA	18210108	18223689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18210181_18219410_18219490_18222041
transcript_89049.known	chr8	+	344	2	FSM	ENSG00000285624.2	ENST00000648666.1	344	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTGTCTGTCTCTTTTC	18387220	False	NA	2	True	AATAAA	-17	NA	18387267	18388319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18387357_18388064
transcript_89050.known	chr8	+	1285	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	18391254	True	NA	7	True	AATAAA	-17	NA	18391281	18401218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18391346_18399997
transcript_89051.known	chr8	+	1984	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	12.6227308191743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTGTACTTGAAAACG	19312856	True	NA	NA	False	AATAAA	-31	NA	19313975	19394953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_89056.nic	chr8	+	2771	9	NIC	ENSG00000104611.12	novel	1984	10	NA	NA	-16	-413	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	10.4455433080333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTAGTTCATGCTGAG	19313925	False	NA	4	True	AATAAA	-16	NA	19313959	19395805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_89057.nic	chr8	+	3184	9	NIC	ENSG00000104611.12	novel	1984	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	10.4455433080333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTACAAGCTTGTTG	19313925	False	NA	9	True	AATAAA	-18	NA	19313959	19396218	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_8906.nic	chr1	+	2431	9	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-12	56	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	105.339258469955	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGGTTGGTTTGTCT	171776309	True	NA	29	True	AATAAA	-31	NA	171781647	171796959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_171781796_171781987_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_89061.known	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_15	26.5717630907322	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	19813911	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_89063.nic	chr8	+	1995	15	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	8	7830	8	0	5prime_fragment	FALSE	canonical	3	229	junction_7	21.9694825443228	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATCCTTTTTTCTTGTTT	19813919	True	NA	44	True	NA	NA	NA	19817423	19844237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075
transcript_89065.nic	chr8	+	1087	7	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	-105	27999	-80	-424	5prime_fragment	FALSE	canonical	3	269	junction_6	18.033918659632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTATTGATTCTTTTGG	19817281	True	NA	15	True	AATAAA	-17	NA	19817310	19824068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872
transcript_89068.known	chr8	+	3565	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.76095228569523	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	19938176	True	NA	11	True	AATAAA	-24	NA	19939252	19967259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
transcript_89073.known	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_8	81.6657931765065	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	20188307	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
transcript_89082.known	chr8	+	670	6	FSM	ENSG00000147416.11	ENST00000519667.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_3	62.7292595205778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGTGTTATTGTTTGT	20188365	True	NA	NA	False	AATAAA	-17	NA	20197438	20211415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176
transcript_89083.known	chr8	-	4991	9	FSM	ENSG00000168546.11	ENST00000524240.6	4991	9	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_8	4.84122918275927	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTAATGGTGTGAAT	-21788838	True	NA	NA	False	AATAAA	-21	NA	21788875	21690397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_21693401_21694463_21694518_21702804_21702978_21704984_21705126_21705931_21706042_21750587_21750943_21774971_21775056_21782584_21782900_21788119
transcript_89084.nnic	chr8	+	2053	6	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	107.861021689951	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916935	True	NA	24	True	AATAAA	-20	NA	21919661	22006585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_21919721_21999659_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_89086.known	chr8	+	1490	10	FSM	ENSG00000158806.14	ENST00000518119.6	1490	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.42216638714053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22023913	True	NA	NA	False	AATAAA	-16	NA	22024133	22036897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22024624_22024723_22024831_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_89087.nic	chr8	+	1055	9	NIC	ENSG00000158806.14	novel	1490	10	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22023875	True	NA	NA	False	AATAAA	-16	NA	22024095	22036897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_22024258_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_89093.known	chr8	+	497	4	FSM	ENSG00000158806.14	ENST00000520456.5	497	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22034077	False	NA	NA	False	AATAAA	-16	NA	22034107	22036897	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22034276_22034509_22034545_22036492_22036527_22036637
transcript_89094.known	chr8	+	1706	5	FSM	ENSG00000158815.11	ENST00000518533.5	1706	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	22042341	True	NA	2	True	AATAAA	-14	NA	22042397	22048806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22042964_22043144_22043182_22046146_22046292_22046526_22046634_22047955
transcript_89095.nnic	chr8	-	1485	9	NNC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	125.796897318654	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22136038	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450_22141660_22141884
transcript_89096.known	chr8	-	1666	8	FSM	ENSG00000168476.12	ENST00000306306.8	1666	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_6	14.5447935842405	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22135994	True	NA	-19	True	AATAAA	-14	NA	22141907	22138019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_89097.known	chr8	+	5494	8	FSM	ENSG00000168495.13	ENST00000397802.8	5494	8	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_4	14.030578849682	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCCCTGCGTGGTCCG	22243785	False	NA	9	True	ATTAAA	-21	NA	22245234	22254600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_89098.known	chr8	+	5114	23	FSM	ENSG00000197181.12	ENST00000356766.11	5114	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	9.45104830426693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTGTGTTTGAAAT	22274775	True	NA	NA	False	AATAAA	-17	NA	22275315	22357568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22354270_22354379_22355348
transcript_89099.nnic	chr8	+	2702	21	NNC	ENSG00000197181.12	novel	3488	22	NA	NA	-2	-33503	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	7.29657453878188	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGTTTTTTTTTTTG	22274773	True	NA	7	True	AATAAA	-15	NA	22275313	22322013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22321845
transcript_89100.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1384	junction_5	118.754934108019	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	22351865	True	NA	20	True	AATAAA	-26	NA	22367277	22422736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_8911.known	chr1	+	3368	8	FSM	ENSG00000010165.20	ENST00000361735.4	3368	8	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	12.8714206437267	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	171776321	True	NA	7	True	ATTAAA	-16	NA	171781659	171797716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_89111.known	chr8	+	599	4	FSM	ENSG00000120913.24	ENST00000614502.4	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	73.9203775844132	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACAATGGTGGGCAGT	22585522	True	NA	NA	False	NA	NA	NA	22589281	22593974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
transcript_89113.known	chr8	+	701	3	FSM	ENSG00000120913.24	ENST00000443561.3	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	169	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGTGGGAAGGAGAG	22585523	True	NA	-88	True	NA	NA	NA	22589282	22594195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22589375_22589595_22589742_22593732
transcript_89115.known	chr8	+	1491	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	157.861714762175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTATAAATATATGAATA	22578763	False	NA	-18	True	GGGGCT	-35	NA	22579149	22594265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_89116.known	chr8	+	4853	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-125	-1043	-125	550	multi-exon	FALSE	canonical	3	780	junction_7	69.7530465284492	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	22603474	False	NA	NA	False	NA	NA	NA	22604631	22621514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_89123.known	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	8.7740740252177	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-22666522	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
transcript_89125.nic	chr8	-	1498	8	NIC	ENSG00000147439.14	novel	1836	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	52.3200511764088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	-22666540	True	NA	37	True	AGTAAA	-19	NA	22669139	22620711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636921_22636963_22644754_22644804_22669043
transcript_89126.known	chr8	-	1431	7	FSM	ENSG00000147439.14	ENST00000519513.5	1431	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	59.2267300765082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	-22666514	True	NA	37	True	AGTAAA	-19	NA	22669113	22620711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22644754_22644804_22669043
transcript_89127.known	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	69.8030739710112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	-23061005	True	NA	2	True	NA	NA	NA	23069021	23022310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_89130.known	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	21.9512955198549	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-23061015	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_89136.known	chr8	-	1945	2	FSM	ENSG00000245025.3	ENST00000502083.2	1945	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTTCCTCTCTATTT	-23019325	False	16	NA	False	NA	NA	NA	23019335	23006380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23008118_23019127
transcript_89137.known	chr8	+	1395	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	11.9242400177118	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGTGTGTTGGTTTTT	23102650	True	NA	NA	False	NA	NA	NA	23102920	23117445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
transcript_89143.known	chr8	+	1242	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	23084201	True	NA	12	True	AATAAA	-27	NA	23084354	23103558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
transcript_89144.known	chr8	-	3535	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	16.1380760935125	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGTTCGTTTATTT	-23161665	True	NA	NA	False	AATAAA	-22	NA	23164027	23135587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
transcript_89145.known	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	-23223443	True	NA	99	True	NA	NA	NA	23225102	23190451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
transcript_8915.known	chr1	+	3022	8	FSM	ENSG00000010165.20	ENST00000362019.7	3022	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	115.712345662749	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	171776343	True	NA	8	True	ATTAAA	-17	NA	171781681	171797717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171781796_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_89150.known	chr8	+	632	2	FSM	ENSG00000246582.3	ENST00000522600.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAATGGAGTGAGACA	23225426	False	NA	NA	False	AATAAA	-43	NA	23225633	23228207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23226124_23228065
transcript_89151.known	chr8	+	3367	10	FSM	ENSG00000147457.14	ENST00000313219.8	3367	10	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	22.7796747177591	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTCCTCTTTAGGT	NA	False	NA	11	True	ATTAAA	-18	NA	23246090	23261999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_89154.known	chr8	+	2639	10	FSM	ENSG00000147457.14	ENST00000517325.5	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	96.0578529382742	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	23243935	True	NA	4	True	ATTAAA	-11	NA	23246641	23261992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23246825_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_89162.known	chr8	+	1573	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	25.6316131337209	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	23286140	True	NA	21	True	AATAAA	-23	NA	23288107	23296279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_89167.known	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	TRUE	canonical	2	103	junction_11	38.4795342515085	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	-23399148	True	NA	NA	False	NA	NA	NA	23404120	23296896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_89169.nnic	chr8	-	1431	6	NNC	ENSG00000134013.16	novel	975	4	NA	NA	32	827	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	66.9907456295271	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATATTTTCCCTTGGTT	-23399222	True	NA	0	True	ATTAAA	-20	NA	23404194	23330609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_23330751_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_89170.known	chr8	-	5803	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	46.5983875495947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGTAGACTGTGTGGG	-23453996	True	NA	-10	True	AATAAA	-20	NA	23457647	23429161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_89171.known	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	36.4793510846281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	-23454044	True	NA	NA	False	NA	NA	NA	23457695	23432925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_89173.known	chr8	-	2026	12	FSM	ENSG00000197217.13	ENST00000523958.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	48.6660062599065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTTGGTTATTCTC	-23453988	True	NA	NA	False	AATACA	-20	NA	23457639	23434092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_89178.known	chr8	-	2097	13	FSM	ENSG00000197217.13	ENST00000356206.10	2097	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.0885848210835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTATTTTATTCTAC	-23454044	True	NA	NA	False	AATAAA	-19	NA	23457695	23385782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23386046_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_89179.known	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	104.964544278321	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23526343	True	NA	16	True	AATAAA	-16	NA	23528955	23575463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
transcript_8918.nic	chr1	+	2467	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-21	56	intron_retention	FALSE	canonical	3	35	junction_4	118.196752164441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGGTTGGTTTGTCT	171776300	True	NA	29	True	AATAAA	-31	NA	171781638	171796959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
transcript_89182.known	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	106.686456497533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526343	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
transcript_89186.known	chr8	+	3404	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	88.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526354	True	NA	NA	False	AGTAAA	-16	NA	23528966	23572221	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23568379_23571334
transcript_89187.known	chr8	+	3018	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTAATTCTGGC	23529023	False	NA	NA	False	NA	NA	NA	23529052	23568965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107
transcript_89188.known	chr8	+	479	2	FSM	ENSG00000147454.14	ENST00000519192.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTAGTGAGAGTGTAA	23526362	True	NA	NA	False	AATAAA	-16	NA	23528974	23531925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23531684
transcript_89189.known	chr8	-	1748	4	FSM	ENSG00000159167.12	ENST00000524323.1	1748	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	98.8612945270067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAATGGAATAACTAT	-23853917	False	NA	NA	False	NA	NA	NA	23854311	23843913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854045
transcript_89190.known	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	10.2089285540757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	-23854412	True	NA	-14	True	AATAAA	-14	NA	23854806	23841928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
transcript_89194.known	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	24911334	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_24914874_24915604_24915730_24917060
transcript_89198.known	chr8	+	2519	3	FSM	ENSG00000104722.14	ENST00000433454.3	2519	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	76.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTCTTATGTCATT	24912515	False	NA	17	True	AATAAA	-24	NA	24914941	24919098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_24915298_24915604_24915730_24917060
transcript_892.known	chr1	-	1247	3	FSM	ENSG00000074800.16	ENST00000492343.2	1247	3	0	0	0	0	multi-exon	FALSE	canonical	3	17235	junction_1	186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAATCACCGGTTCTCTT	-8636999	True	NA	NA	False	NA	NA	NA	8878692	8870946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_8871987_8874823_8874918_8878579
transcript_89200.known	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	54.6158300210561	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-24952531	True	NA	-3	True	AATAAA	-18	NA	24956612	24950954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
transcript_89201.known	chr8	+	490	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTATGTATGGAGAAGA	24956568	False	NA	8	True	AATAAA	-19	NA	24956620	24957110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_24956600_24957100
transcript_89203.known	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_11	10.816271794717	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-25457774	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
transcript_89209.known	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_13	24.2374520449789	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	25448857	True	NA	24	True	AATAAA	-20	NA	25459232	25507911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_89213.nic	chr8	+	1982	14	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-43	4512	-9	-4474	5prime_fragment	TRUE	canonical	3	222	junction_13	24.3261857595774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGGAAAGAAAAGTGT	25458633	False	NA	NA	False	AAAAAG	-17	NA	25459189	25503399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372
transcript_89214.known	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_12	25.0523711806916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	25448823	True	NA	-14	True	AATAAA	-23	NA	25459198	25507873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_89215.nic	chr8	+	1245	3	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-43	46628	-9	-788	5prime_fragment	FALSE	canonical	3	233	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACACAAACAGAAG	25458633	False	NA	NA	False	NA	NA	NA	25459189	25461283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_25459474_25460239_25460301_25460383
transcript_89216.nic	chr8	+	1329	2	ISM	ENSG00000184661.14	ENST00000380665.3	3565	14	-9	46589	-9	-787	5prime_fragment	FALSE	canonical	3	233	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACACAAACAGAAGA	25458633	False	NA	NA	False	NA	NA	NA	25459189	25461284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_25459474_25460239
transcript_89219.known	chr8	+	3923	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_7	27.2600644003478	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	26288365	True	NA	14	True	AATAAA	-19	NA	26291507	26372680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_8922.nnic	chr1	+	2562	5	NNC	ENSG00000010165.20	novel	3368	8	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	13	junction_4	147.581333508002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTCTGTAATGCATT	171776300	True	NA	1	True	AATACA	-16	NA	171781638	171790923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171789999
transcript_89225.nic	chr8	+	1491	7	ISM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	9455	0	2140	5prime_fragment	FALSE	canonical	3	298	junction_2	24.0468293128221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACTTTGGTTTAAAA	26288365	True	NA	NA	False	NA	NA	NA	26291507	26363225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683
transcript_89229.known	chr8	+	3452	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	59.2128364461626	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	26377840	True	NA	12	True	ATTAAA	-16	NA	26383053	26413127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_89230.known	chr8	+	875	6	FSM	ENSG00000104765.16	ENST00000523949.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	404.53331136014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTGTTAAAATTTG	26377983	False	NA	NA	False	AATAAA	-19	NA	26383196	26505636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26505306
transcript_89231.known	chr8	+	915	6	FSM	ENSG00000104765.16	ENST00000523515.5	915	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	403.133030152579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCTTTTCCGCAAATG	26378164	False	NA	NA	False	NA	NA	NA	26383377	26410666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383479_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_89232.known	chr8	+	739	6	FSM	ENSG00000104765.16	ENST00000520409.5	739	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	402.341645868284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCACCCTGTTTTTACA	26383276	True	NA	NA	False	NA	NA	NA	26383414	26410509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383497_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_89233.known	chr8	+	502	4	FSM	ENSG00000104765.16	ENST00000521254.1	502	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	443.881615849191	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTACATATCCAATTC	26395302	True	NA	NA	False	NA	NA	NA	26395616	26410519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26395709_26407999_26408104_26408226_26408377_26410363
transcript_89234.known	chr8	-	4730	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTTTTTCTGTTTCC	-26513098	True	NA	-21	True	AATAAA	-16	NA	26513872	26504700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_26509244_26509547_26509678_26513815
transcript_89236.known	chr8	+	2776	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_13	7.6955975870768	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCACACTTGCA	27489451	True	NA	NA	False	NA	NA	NA	27491142	27545564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_89238.known	chr8	+	1959	18	FSM	ENSG00000120915.14	ENST00000518379.5	1959	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	22.0733285643565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTCAATAAAGCTAAGAT	27489500	True	NA	-19	True	NA	NA	NA	27491191	27544892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_89239.nic	chr8	+	2663	17	ISM	ENSG00000120915.14	ENST00000521400.6	2776	19	23	645	0	0	intron_retention	FALSE	canonical	3	75	junction_13	7.33889467154285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGCTGTCTTTGTTCT	27489474	True	NA	8	True	AATAAA	-16	NA	27491165	27544919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748
transcript_89241.nnic	chr8	+	854	6	NNC	ENSG00000120915.14	novel	1923	14	NA	NA	-22	1837	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	35.0394063876659	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATCTTTGTGTGTGT	27489411	True	NA	39	True	NA	NA	NA	27491102	27508741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27508653
transcript_89243.nic	chr8	+	959	6	ISM	ENSG00000120915.14	ENST00000520623.5	1923	14	50	27155	9	0	5prime_fragment	FALSE	canonical	3	80	junction_3	5.70613704707484	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	27489483	True	NA	NA	False	NA	NA	NA	27491174	27512100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835
transcript_89247.nic	chr8	-	1598	10	NIC	ENSG00000120885.22	novel	2749	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	380.30312795953	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	-27614107	True	NA	-29	True	AATAAA	-18	NA	27614730	27597995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605070_27605171_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_89254.known	chr8	-	2098	9	FSM	ENSG00000120885.22	ENST00000405140.7	2098	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	433.480968440369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCAAGAATTGCT	-27610808	False	NA	NA	False	AATAAA	-36	NA	27611431	27597807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611145
transcript_89256.known	chr8	-	2749	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	0	0	0	multi-exon	TRUE	canonical	3	1088	junction_4	105.03087343729	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTCCACTGTTA	-27614077	True	NA	NA	False	NA	NA	NA	27614700	27596916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_8926.nnic	chr1	-	867	3	NIC	ENSG00000135845.10	novel	1661	5	NA	NA	-10	-617	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCCAATGATAAATTT	-172442528	True	NA	NA	False	AATAAA	-21	NA	172444096	172393750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_172394411_172399818_172399917_172443987
transcript_89265.known	chr8	-	303	3	FSM	ENSG00000120885.22	ENST00000519472.5	303	3	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_2	123.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGGAGCCGCTACCGC	-27614058	True	NA	21	True	AAGAAA	-5	NA	27614681	27608936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27609087_27610474_27610601_27614654
transcript_89268.known	chr8	+	3754	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	17.8044938147649	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	27770245	True	NA	NA	False	NA	NA	NA	27774553	27805316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
transcript_8927.known	chr1	-	744	2	FSM	ENSG00000135845.10	ENST00000478184.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTGATCTCATTGAT	-172442378	False	NA	NA	False	NA	NA	NA	172443946	172442330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_172442831_172443702
transcript_89272.known	chr8	-	3627	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_6	36.5684290064531	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTGAGAGAGATT	-27764868	True	NA	-5	True	AATAAA	-21	NA	27772640	27733315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89279.known	chr8	-	3586	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	127.942908186042	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTGTGAGAGAGA	-27764881	False	NA	-7	True	AATAAA	-19	NA	27772653	27733317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_8928.known	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	-172442501	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_172442831_172443987
transcript_89280.known	chr8	-	977	8	FSM	ENSG00000147419.19	ENST00000519509.5	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	147.612841651423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGAAACACTTTTCA	-27764868	True	NA	33	True	AAAACA	-2	NA	27772640	27735861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89283.known	chr8	-	877	8	FSM	ENSG00000147419.19	ENST00000517979.1	877	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	195.603722680655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	-27764841	True	NA	NA	False	AAAAAG	-43	NA	27772613	27748071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27764285_27764534_27765203_27765252_27772512
transcript_89284.known	chr8	-	1836	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	12.0678354753959	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	-27836993	True	NA	-24	True	AATAAA	-44	NA	27837817	27809623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
transcript_89288.known	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	189.310517991532	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-27764867	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_8929.known	chr1	+	5495	22	FSM	ENSG00000094975.14	ENST00000616058.4	5495	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	42.583944042907	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTGGCTCTTCTGTCT	172529891	True	NA	28	True	AATAAA	-21	NA	172533117	172611831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_89290.nic	chr8	-	618	7	ISM	ENSG00000147419.19	ENST00000356537.9	3627	9	-15	14809	-2	-53	5prime_fragment	FALSE	canonical	3	382	junction_4	41.0639744788543	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAAAGAAGAAATGA	NA	False	NA	62	True	AAAAAG	-23	NA	27772655	27748124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89295.known	chr8	-	819	6	FSM	ENSG00000168078.10	ENST00000524266.1	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.5708876163164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGTGTGGCTTGCGTA	-27836959	True	NA	NA	False	NA	NA	NA	27837783	27810293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27828104_27828199_27833055_27833134_27837651
transcript_893.known	chr1	+	456	2	FSM	ENSG00000230679.1	ENST00000442636.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTACTTGAATTTAA	8878723	True	NA	NA	False	ACTAAA	-39	NA	8878834	8879894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_8878961_8879564
transcript_89300.known	chr8	+	3148	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	28.6624443180569	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCATGTGGTTTTCT	28090155	True	NA	7	True	AATAAA	-19	NA	28093138	28191153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_89306.known	chr8	+	1914	14	FSM	ENSG00000134014.17	ENST00000524103.5	1914	14	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	50.2679212353708	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCAGGTGGCCTATT	28090128	True	NA	-94	True	NA	NA	NA	28093111	28189992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_8931.known	chr1	+	756	2	FSM	ENSG00000094975.14	ENST00000608566.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGAAGTAATTTATA	172530156	False	NA	NA	False	NA	NA	NA	172533382	172552152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_172533498_172551511
transcript_89310.known	chr8	+	1924	13	FSM	ENSG00000134014.17	ENST00000519261.5	1924	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	69.2597265531869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	28090156	True	NA	8	True	AATAAA	-22	NA	28093139	28190094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_89317.nic	chr8	-	1202	9	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	33.9924164336694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	-28489249	True	NA	-25	True	AGTAAA	-16	NA	28490287	28428411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452367_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_89318.known	chr8	-	1254	9	FSM	ENSG00000214050.8	ENST00000380254.7	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.6810274454602	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	-28489191	True	NA	-25	True	AGTAAA	-16	NA	28490229	28428411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_89319.nic	chr8	-	1333	9	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.1723572496836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	-28489249	True	NA	-25	True	AGTAAA	-16	NA	28490287	28428411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483484_28490185
transcript_89321.known	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	22.300971578237	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	-28489240	True	NA	-61	True	NA	NA	NA	28490278	28428447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
transcript_89325.nic	chr8	-	1570	5	ISM	ENSG00000214050.8	ENST00000380254.7	1254	9	-58	27409	-9	837	5prime_fragment	FALSE	canonical	3	70	junction_1	2.38484800354236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTACAATTGCAATGA	-28489249	True	NA	NA	False	AATAAA	-15	NA	28490287	28455820	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_89327.nic	chr8	-	797	4	NIC	ENSG00000214050.8	novel	398	3	NA	NA	-306	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	32.7651576458218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGTTGACATTTTGT	-28490541	False	NA	-2	True	AATAAA	-21	NA	28490584	28465198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_28465446_28473771_28473808_28483347_28483463_28490185
transcript_89328.known	chr8	+	13770	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	42.5186633690886	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	28489869	True	NA	12	True	AATAAA	-15	NA	28494211	28574258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_89337.known	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_3	15.6599608875629	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887292	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_89338.known	chr8	-	2759	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	42.8620526288179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28890231	False	NA	-5	True	AATAAA	-18	NA	28890242	28767660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
transcript_89340.known	chr8	-	1154	10	FSM	ENSG00000104299.15	ENST00000520983.5	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	15.5547618845147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTCTCACATTACTG	-28887244	True	NA	NA	False	AATAAA	-9	NA	28889921	28793728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_89343.nic	chr8	+	2457	11	NIC	ENSG00000147421.18	novel	2216	11	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	3.69323706252388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAGCTTGAGAGCAT	NA	False	NA	NA	False	ATTAAA	-43	NA	28890372	29051914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29049289_29049362_29051017
transcript_89344.nnic	chr8	+	2490	11	NNC	ENSG00000147421.18	novel	2216	11	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.87943294825416	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAGCTTGAGAGCAT	NA	False	NA	NA	False	ATTAAA	-43	NA	28890372	29051914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29049289_29049395_29051017
transcript_89346.nic	chr8	+	2454	11	NIC	ENSG00000147421.18	novel	1731	10	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	3.80131556174964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAGCTTGAGAGCAT	NA	False	NA	NA	False	ATTAAA	-43	NA	28890372	29051914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049362_29051017
transcript_89347.nnic	chr8	+	2487	11	NNC	ENSG00000147421.18	novel	1765	10	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.97994974842648	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAGCTTGAGAGCAT	NA	False	NA	NA	False	ATTAAA	-43	NA	28890372	29051914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049395_29051017
transcript_89349.known	chr8	+	3711	10	FSM	ENSG00000147421.18	ENST00000287701.15	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.28107179116298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAAGTGAAGTGGAGC	28889965	True	NA	NA	False	AATATA	-22	NA	28890394	29053262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29051017
transcript_89353.nic	chr8	-	1742	16	ISM	ENSG00000197892.13	ENST00000521515.1	2765	18	-33	2881	-6	1553	5prime_fragment	FALSE	canonical	2	6	junction_5	2.47296493213219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCAGAACGAGAGGATG	-29261817	True	NA	NA	False	AAAAAG	-6	NA	29263130	29148743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_89355.known	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	300.864487768164	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	-30083091	False	NA	-19	True	AATAAA	-13	NA	30083124	30063097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
transcript_89356.known	chr8	-	1741	6	FSM	ENSG00000133872.14	ENST00000521265.5	1741	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	238.422314391921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATCAATAAAAACA	-30082915	False	NA	-47	True	NA	NA	NA	30082948	30063125	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30063914_30066027_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
transcript_89359.known	chr8	-	1803	5	FSM	ENSG00000133872.14	ENST00000520303.5	1803	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	259.908036620648	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAGAATCAATAAA	-30083120	False	NA	-51	True	NA	NA	NA	30083153	30063129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
transcript_89362.known	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	26.1241693116207	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	30153574	True	NA	7	True	ATTAAA	-19	NA	30156368	30183639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_89368.known	chr8	+	820	6	FSM	ENSG00000104671.8	ENST00000522141.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	108.161730755383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGACAAGAAAAGACATAC	30153524	True	NA	-62	True	TATAAA	-38	NA	30156318	30183461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30156407_30164110_30164176_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_89371.known	chr8	+	908	5	FSM	ENSG00000104660.19	ENST00000442880.6	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	349.7792160778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGGAGGAACTTAGT	30088597	True	NA	NA	False	NA	NA	NA	30095424	30137697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30132374_30132490_30137271
transcript_89372.known	chr8	+	3163	4	FSM	ENSG00000104660.19	ENST00000321250.13	3163	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_3	41.515726605174	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTCGTGTCCCAA	30088580	True	NA	NA	False	NA	NA	NA	30095407	30108524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30105745
transcript_89375.known	chr8	+	1389	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	319.806538742131	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATATCTTTTCCAGA	30088652	True	NA	NA	False	NA	NA	NA	30095479	30138348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
transcript_89379.known	chr8	+	589	3	FSM	ENSG00000104660.19	ENST00000518001.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	315.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAAGGATTAAAAGGAT	30088582	True	NA	-17	True	NA	NA	NA	30095409	30106028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30104299_30104487_30105745
transcript_89382.known	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	NA	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30117400_30117800
transcript_89383.known	chr8	-	403	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCGTCATTATGCCCT	-30156029	True	NA	-2	True	AATAAA	-19	NA	30156232	30155829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30155800_30156200
transcript_89388.nic	chr8	+	978	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	564.792868558908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	30441828	True	NA	27	True	AATAAA	-24	NA	30442579	30570757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_89394.known	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	642.914889822561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	30385184	False	NA	NA	False	NA	NA	NA	30385202	30547483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89395.nic	chr8	+	914	7	NIC	ENSG00000157110.16	novel	1613	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	623.085712848205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30441828	True	NA	NA	False	AATAAA	-28	NA	30442579	30547522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89396.nnic	chr8	+	920	7	NNC	ENSG00000157110.16	novel	1613	6	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	640.699465861769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30441828	True	NA	NA	False	AATAAA	-28	NA	30442579	30547522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_30442807_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89397.known	chr8	+	494	2	FSM	ENSG00000157110.16	ENST00000522099.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTAGACTGCAGCGTT	30545184	False	NA	NA	False	AATAAA	-25	NA	30545199	30547519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30545466_30547291
transcript_89398.known	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_6	339.027366971393	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30384297	False	NA	NA	False	AATAAA	-28	NA	30384510	30547522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_894.known	chr1	-	536	4	FSM	ENSG00000074800.16	ENST00000486051.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8213.27094132146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATTTTAAGAGTGGCT	-8636995	True	NA	NA	False	AAGAAA	-7	NA	8878688	8870171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_8870409_8871890_8871987_8874823_8874918_8878579
transcript_89403.known	chr8	-	1747	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	18.3647844017415	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTCTTTTAA	-30655616	True	NA	1	True	AATAAA	-17	NA	30658236	30578317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
transcript_89406.known	chr8	+	1451	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.67297920965604	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743170	True	NA	27	True	AATAAA	-38	NA	30744163	30767006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_89407.known	chr8	+	702	8	FSM	ENSG00000104691.16	ENST00000615729.4	702	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.914311361867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGGGAGAGCTCCCT	30743196	True	NA	-75	True	NA	NA	NA	30744189	30766394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744278_30751506_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_89409.known	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.5269949300181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743180	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_8941.known	chr1	+	1690	5	FSM	ENSG00000117592.9	ENST00000340385.6	1690	5	0	0	0	0	multi-exon	FALSE	canonical	3	3684	junction_2	175.869269629461	1915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCATATTTTGAA	173445783	True	NA	28	True	AATAAA	-28	NA	173477334	173488815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173477493_173481325_173481483_173485360_173485508_173486254_173486402_173487734
transcript_89410.known	chr8	+	1202	7	FSM	ENSG00000104691.16	ENST00000341403.9	1202	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.1986841535707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATTTTGCCTTGTATT	30743195	True	NA	-74	True	NA	NA	NA	30744188	30766905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_89414.known	chr8	-	1946	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_4	25.0183266160362	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTATTGTGTTGTG	-30806465	True	NA	NA	False	AATAAA	-21	NA	30812818	30785615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
transcript_89415.nic	chr8	+	1462	8	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-59	99527	-37	-8617	5prime_fragment	FALSE	canonical	3	86	junction_4	13.1800715367666	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGATTCAAAGTTGTCA	31027253	True	NA	NA	False	AATAAA	-20	NA	31033750	31076611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172
transcript_8942.known	chr1	-	2660	6	FSM	ENSG00000183831.7	ENST00000333279.3	2660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.35646599662505	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAATAAAAACA	-173669623	True	NA	NA	False	NA	NA	NA	173669851	173608335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173610216_173624786_173624926_173627064_173627160_173646845_173647014_173659090_173659434_173669816
transcript_89421.nic	chr8	+	1310	3	ISM	ENSG00000165392.11	ENST00000650667.1	5051	34	-37	113671	-37	-25161	5prime_fragment	FALSE	canonical	3	114	junction_1	4	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAAAAAACAACCCCACA	31027253	True	NA	NA	False	NA	NA	NA	31033750	31060067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_31033974_31058371_31058544_31059152
transcript_89422.known	chr8	+	1477	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	16.3571255285137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922334	True	NA	23	True	AGTAAA	-1	NA	32927920	33045445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
transcript_89423.nic	chr8	+	634	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	8	241	-7	0	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	32922374	True	NA	22	True	AATAAA	-19	NA	32927960	33044614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_89424.nic	chr8	+	875	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	8	0	-7	0	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	32922374	True	NA	24	True	AATAAA	-21	NA	32927960	33044855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_89425.known	chr8	+	657	4	FSM	ENSG00000247134.8	ENST00000670899.1	657	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	136.675609463511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	32922390	True	NA	22	True	AATAAA	-19	NA	32927976	33044614	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996356_33041634_33041772_33044366
transcript_89426.known	chr8	+	1277	3	FSM	ENSG00000247134.8	ENST00000657565.1	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	38	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	32922390	True	NA	-12	True	NA	NA	NA	32927976	33045410	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33044366
transcript_89427.known	chr8	+	1314	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	99	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922381	True	NA	23	True	AGTAAA	-1	NA	32927967	33045445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_33041634_33041744_33044366
transcript_89429.known	chr8	+	1397	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	38.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922326	True	NA	23	True	AGTAAA	-1	NA	32927912	33045445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_33041634_33041772_33044366
transcript_89431.known	chr8	+	634	2	FSM	ENSG00000247134.8	ENST00000664284.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTCAGGGAGTCTGA	32922357	True	NA	19	True	AATAAA	-45	NA	32927943	33044850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_33044366
transcript_89432.known	chr8	-	577	1	FSM	ENSG00000272338.2	ENST00000606064.2	577	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGCTTGTGTGTTTA	NA	False	NA	-2	True	AATAAA	-35	NA	33361415	33360838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33360800_33361400
transcript_89435.known	chr8	-	3549	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	19.0705925445435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGAGTTGTGTTTTTT	-33471499	True	NA	NA	False	TATAAA	-2	NA	33473146	33370823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
transcript_89439.nnic	chr8	-	1465	4	NIC	ENSG00000172728.16	novel	3549	5	NA	NA	-7	0	intron_retention	FALSE	canonical	2	26	junction_1	46.4494946749214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTATCCACTCTTCAAG	-33471506	True	NA	-32	True	AATAAA	-17	NA	33473153	33372078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_33372805_33453215_33453511_33461371_33461726_33473063
transcript_8944.known	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	8.19191296441368	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	173713404	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_89441.known	chr8	-	2187	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCAGTCTTGGGTA	-33471466	True	NA	NA	False	ATTAAA	-15	NA	33473113	33451727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33453511_33461371_33461726_33473063
transcript_89442.known	chr8	+	3561	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	27.4307208152546	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	33477070	True	NA	27	True	AATAAA	-18	NA	33485181	33501262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_89449.known	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	80.3416175478443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-33510830	True	NA	-5	True	AATAAA	-35	NA	33513135	33498721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
transcript_89450.known	chr8	-	2516	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	112.840505102719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	33513185	33498508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
transcript_89452.nic	chr8	-	1827	7	NIC	ENSG00000129696.13	novel	2131	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_4	119.062541921836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	NA	False	NA	-4	True	AATAAA	-19	NA	33513156	33498953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966_33512713_33513081
transcript_89454.nic	chr8	-	1663	7	NIC	ENSG00000129696.13	novel	2131	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_4	119.062541921836	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	NA	False	NA	-50	True	NA	NA	NA	33513156	33499117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966_33512713_33513081
transcript_89456.known	chr8	-	2242	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	42.3936578065897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	-33510804	True	NA	-4	True	AATAAA	-19	NA	33513109	33498953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
transcript_89457.known	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	109.806375042618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	-33510407	False	NA	-50	True	NA	NA	NA	33512712	33499117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
transcript_89458.known	chr8	+	104	1	FSM	ENSG00000239039.1	ENST00000459299.1	104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTCAAGGATCGATTT	33513286	True	NA	21	True	NA	NA	NA	33513474	33513578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_33513500_33513600
transcript_89459.known	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.92341345003647	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-33564286	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
transcript_89460.known	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.6144555520604	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	NA	False	NA	-1	True	AATAAA	-16	NA	33600023	33591329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
transcript_89461.known	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	11.6107673026106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	37731475	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_89464.known	chr8	+	1466	7	FSM	ENSG00000147475.17	ENST00000648919.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.20568908339411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTATCTCACTA	37731475	True	NA	NA	False	AGTAAA	-15	NA	37736633	37746550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_89466.known	chr8	+	1742	7	FSM	ENSG00000147475.17	ENST00000335171.10	1742	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.7627931460511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTTGTTTATCTCAC	37731526	True	NA	NA	False	AGTAAA	-13	NA	37736684	37746548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37737008_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_89468.known	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	73.976554476705	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	37754276	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
transcript_89475.known	chr8	+	559	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	167.847400933109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTAAGTATAGTAAAG	37754286	True	NA	NA	False	AATAAA	-28	NA	37762654	37766716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
transcript_89479.nnic	chr8	+	963	5	NNC	ENSG00000147471.12	novel	516	5	NA	NA	-1	1663	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	183.277794617897	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGAGATATATTGGACT	37754225	True	NA	NA	False	AATAAA	-35	NA	37762593	37768404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37767826
transcript_8948.known	chr1	+	450	4	FSM	ENSG00000076321.11	ENST00000479505.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	19.8158185969358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAAGCACCCTCGACAA	173713364	True	NA	NA	False	NA	NA	NA	173714940	173733828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173715079_173715522_173715655_173716002_173716067_173733712
transcript_89481.known	chr8	+	770	4	FSM	ENSG00000147471.12	ENST00000520073.5	770	4	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	28.7672653471886	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAATTATAGTAAAGTA	37754226	True	NA	NA	False	AATAAA	-36	NA	37762594	37766741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279
transcript_89485.known	chr8	-	1192	5	FSM	ENSG00000104221.13	ENST00000520601.5	1192	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	52.7967802048572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGCCAGTCCTGCCCTT	-37847595	True	NA	NA	False	NA	NA	NA	37849838	37844701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_37845214_37845685_37845775_37846853_37847176_37848595_37848656_37849629
transcript_89488.known	chr8	-	2560	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	6.34209919681348	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGGGAGATGGGTCTT	-37847618	True	NA	NA	False	NA	NA	NA	37849861	37843267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
transcript_89489.nnic	chr8	+	970	3	NNC	ENSG00000187840.5	novel	827	3	NA	NA	-507	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1485.5	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	NA	False	NA	19	True	AATAAA	-26	NA	38030026	38060365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_38030355_38057080_38057261_38059903
transcript_8949.known	chr1	+	3336	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_12	34.6495287666369	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	173819843	True	NA	25	True	ATTAAA	-41	NA	173824672	173858546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_89490.known	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	2884	junction_1	59.5	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	38006138	True	NA	19	True	AATAAA	-26	NA	38030533	38060365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38030719_38057080_38057261_38059903
transcript_89495.known	chr8	+	2918	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	32.1890250447778	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	38097796	True	NA	NA	False	ATTAAA	-38	NA	38105528	38140080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_89499.known	chr8	+	2678	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	85.5473877775093	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38098060	False	NA	8	True	AATAAA	-18	NA	38105792	38139703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_895.nnic	chr1	+	547	4	NNC	ENSG00000234546.5	novel	488	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	7.78888096369861	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACTTCTCCCCA	9181844	True	NA	NA	False	TATAAA	-20	NA	9182188	9185386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_9182317_9183632_9183808_9183953_9183988_9185176
transcript_89502.known	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_13	126.874777570932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38104969	False	NA	8	True	AATAAA	-18	NA	38105938	38139703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_89508.known	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	5.39804491356722	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-38150857	False	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
transcript_89509.known	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	34.1933838629639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	38167893	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
transcript_89513.known	chr8	+	1943	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	85.7956227839678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACATTTTTGTACAT	38176317	False	NA	NA	False	TTTAAA	-12	NA	38176587	38210888	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
transcript_89515.known	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	277.860076697287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	-38175542	True	NA	-36	True	NA	NA	NA	38176716	38163358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
transcript_89516.known	chr8	-	906	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	29.3295452099452	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	-38170547	True	NA	-16	True	AATAAA	-16	NA	38176493	38163338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
transcript_89518.known	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	264.670864786184	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-38175556	True	NA	-105	True	AAGAAA	-42	NA	38176730	38163427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
transcript_89519.nnic	chr8	-	727	4	NNC	ENSG00000175324.10	novel	906	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	275.033735304518	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	NA	False	NA	-16	True	AATAAA	-16	NA	38176736	38163338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_38163841_38169801_38169918_38171964_38172034_38176696
transcript_89524.known	chr8	-	975	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	293.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATTTCCAAGTTTGA	-38175500	False	NA	-12	True	AATAAA	-20	NA	38176674	38163334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38171964_38172034_38176274
transcript_89527.known	chr8	-	831	7	FSM	ENSG00000147535.17	ENST00000524616.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	251.201556966159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACATGGTGAACCCT	-38263495	True	NA	NA	False	NA	NA	NA	38269196	38264350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268408_38268881_38268991_38269125
transcript_89528.known	chr8	-	875	7	FSM	ENSG00000147535.17	ENST00000531823.5	875	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	252.793503784325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCTGAGGAGG	-38263473	True	NA	NA	False	NA	NA	NA	38269174	38264397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268822_38268991_38269125
transcript_89529.known	chr8	-	2134	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	177.161335761754	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-38263523	True	NA	-10	True	AATAAA	-2	NA	38269224	38263129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_89532.nic	chr8	-	936	7	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	236.910496460865	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGTAAATGTGT	-38263531	True	NA	-18	True	AGTAAA	-11	NA	38269232	38263137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_38263407_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_89536.known	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	222.755783064972	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-38263506	True	NA	-6	True	AATAAA	-18	NA	38269207	38264738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_89539.known	chr8	-	581	6	FSM	ENSG00000147535.17	ENST00000531109.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	258.153442742877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTCTGACTGATGCAGA	-38263474	True	NA	NA	False	NA	NA	NA	38269175	38264542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268881_38268991_38269125
transcript_8955.known	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	83.4472820940796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	173819823	True	NA	-8	True	GATAAA	-5	NA	173824652	173858400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_89553.known	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	97.3354380480203	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-38263542	True	NA	-6	True	AATAAA	-18	NA	38269243	38266979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_89559.nic	chr8	-	692	4	ISM	ENSG00000147535.17	ENST00000531109.5	581	6	-57	2437	-2	0	5prime_fragment	FALSE	canonical	3	46	junction_2	308.978244469664	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-38263531	True	NA	-6	True	AATAAA	-18	NA	38269232	38266979	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_38267392_38267896_38267961_38268881_38268991_38269125
transcript_89564.known	chr8	-	1590	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_2	96	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACCTTTAACGAAG	-38263529	True	NA	-27	True	NA	NA	NA	38269230	38267000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38267392_38267896_38268991_38269125
transcript_89567.known	chr8	+	2240	3	FSM	ENSG00000165046.13	ENST00000519476.6	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATACTTTAGGGTCCAC	38386292	False	NA	17	True	ATTAAA	-30	NA	38386302	38394434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38386569_38387949_38388031_38392541
transcript_89569.known	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_18	27.4217087975692	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	38992513	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_89572.known	chr8	+	3894	22	FSM	ENSG00000168615.13	ENST00000677359.1	3894	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	40.7923228738224	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	38992454	True	NA	-24	True	AATACA	-1	NA	38996913	39104968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091242_39091347_39101862_39101931_39103606
transcript_89575.known	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_3	77.6831169989121	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986744	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
transcript_89576.known	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	271.825107171668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-38986744	True	NA	NA	False	NA	NA	NA	38996509	38991371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
transcript_89578.known	chr8	-	1631	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	264.30453815417	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-38986744	True	NA	-8	True	AATAAA	-15	NA	38996509	38990804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
transcript_89583.known	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	284.51869690565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986718	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
transcript_8959.known	chr1	+	3209	16	FSM	ENSG00000117593.12	ENST00000647645.1	3209	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	86.0330685776631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGTAAAAGTCATTTT	173819878	True	NA	-4	True	ATTAAA	-12	NA	173824707	173858517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_89591.nic	chr8	-	1478	4	NIC	ENSG00000169490.17	novel	1631	4	NA	NA	-53	0	intron_retention	FALSE	canonical	3	31	junction_3	275.115733222705	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-38986797	True	NA	-8	True	AATAAA	-15	NA	38996562	38990804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_38991546_38993544_38993661_38995317_38995795_38996418
transcript_89594.nnic	chr8	+	1632	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_6	39.9028821014222	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	39901444	True	NA	12	True	AATAAA	-17	NA	39902303	39928426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_89595.nnic	chr8	+	1996	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_6	39.9028821014222	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	39901444	True	NA	NA	False	AATAAA	-21	NA	39902303	39928790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_89598.nnic	chr8	+	976	7	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_6	46.8104926509241	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGTGTCATAAATTCA	39901444	True	NA	NA	False	AATAAA	-19	NA	39902303	39922911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551
transcript_89599.nnic	chr8	+	403	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	29	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_3	94.9818696149721	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	39901444	True	NA	NA	False	AATAAA	-26	NA	39902303	39915721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
transcript_896.known	chr1	+	1025	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	9	0	0	multi-exon	FALSE	canonical	2	13	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	9182149	False	NA	8	True	AATAAA	-20	NA	9182163	9192089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9182317_9183632_9183808_9191392
transcript_89600.nnic	chr8	+	346	3	NIC	ENSG00000131203.13	novel	612	5	NA	NA	29	-2213	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	128.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTTTGTATCATGGGT	39901444	True	NA	NA	False	AATAAA	-21	NA	39902303	39915716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39915636
transcript_89602.known	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	9.62635271879577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-40895719	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_89605.known	chr8	-	2250	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_2	15.5897402159241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-40895726	True	NA	NA	False	AGTAAA	-20	NA	40897833	40530589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_89613.nic	chr8	-	1374	5	ISM	ENSG00000165061.15	ENST00000297737.11	2471	7	-34	143499	-27	275	5prime_fragment	FALSE	canonical	3	29	junction_1	8.15475321515004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGATGATAAAAAG	-40895753	True	NA	NA	False	TTTAAA	-14	NA	40897860	40674088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_89615.known	chr8	-	515	5	FSM	ENSG00000165061.15	ENST00000523542.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.2525771826418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAGAAGACCCCATTAA	-40895703	True	NA	NA	False	NA	NA	NA	40897810	40697273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_40697402_40767640_40767731_40808508_40808572_40825574_40825681_40897682
transcript_89616.nic	chr8	-	1988	4	ISM	ENSG00000165061.15	ENST00000315769.11	2250	6	-27	165198	-27	1208	5prime_fragment	FALSE	canonical	3	38	junction_2	4.96655480858378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-40895753	True	NA	NA	False	NA	NA	NA	40897860	40695787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_40697402_40767640_40767731_40825574_40825681_40897682
transcript_8962.known	chr1	+	1793	14	FSM	ENSG00000117593.12	ENST00000648458.1	1793	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	88.2283213395253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTGGTGTTTCAT	173824944	False	NA	NA	False	ATTAAA	-19	NA	173824959	173852014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173851835
transcript_89621.known	chr8	+	6298	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	27.7648858972784	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	41573831	True	NA	NA	False	AATAAA	-17	NA	41578199	41625001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_89634.known	chr8	+	3770	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	14.8804761828569	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	41523286	True	NA	12	True	AATAAA	-21	NA	41529260	41545030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
transcript_89640.known	chr8	+	808	6	FSM	ENSG00000147533.18	ENST00000518270.5	808	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	263.602731397078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGTAGGACTCTGT	NA	False	NA	NA	False	NA	NA	NA	41490395	41509769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490567_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_89641.known	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	265.097416056815	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	41481317	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
transcript_89645.known	chr8	+	582	6	FSM	ENSG00000147533.18	ENST00000523420.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	264.77054216812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGAGCCACGGTGCCA	41481367	True	NA	NA	False	NA	NA	NA	41490611	41509673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490690_41490869_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_89649.known	chr8	+	494	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	41523252	True	NA	NA	False	NA	NA	NA	41529226	41537301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
transcript_89652.known	chr8	+	1595	2	FSM	ENSG00000287535.1	ENST00000665362.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTGAGA	41566812	True	NA	NA	False	NA	NA	NA	41566857	41568641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41566924_41567112
transcript_89654.known	chr8	+	2099	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	67.9535687068751	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	41481337	True	NA	NA	False	AATAAA	-16	NA	41490581	41510980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_89655.known	chr8	+	2022	3	FSM	ENSG00000147536.12	ENST00000520710.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGCAAAACATTCCTA	41523246	True	NA	NA	False	NA	NA	NA	41529220	41538036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41530299_41536359_41536447_41537179
transcript_89658.known	chr8	-	1770	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGACCGGGAACTCCAT	NA	False	NA	-7	True	ATTAAA	-15	NA	41829934	41828164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_41828200_41829900
transcript_89661.known	chr8	-	292	1	FSM	ENSG00000271938.1	ENST00000605981.1	292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTCTAATGAGATGTGC	-42139720	False	NA	NA	False	AATAAA	-17	NA	42139752	42139460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42139500_42139800
transcript_89662.known	chr8	+	3669	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	35.3022225019934	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	23	True	AATAAA	-17	NA	42152945	42171182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_89663.known	chr8	+	3494	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	18.2581317499902	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	42152646	True	NA	24	True	AATAAA	-18	NA	42153062	42171183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_8967.known	chr1	-	688	12	FSM	ENSG00000234741.9	ENST00000454068.5	688	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	1102.45874719021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATCCATCTGGAGTGT	-173867804	False	NA	-47	True	AATAAA	-4	NA	173867815	173863910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867721
transcript_89670.nic	chr8	+	1162	6	ISM	ENSG00000070718.12	ENST00000530375.5	1212	8	-47	3352	9	0	5prime_fragment	FALSE	canonical	3	70	junction_1	22.1142488002645	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	42152621	True	NA	NA	False	AATAAA	-21	NA	42153037	42165779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_89673.known	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.9538914210249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	42154591	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_89674.known	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.30858664117024	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-42207292	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_89676.known	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_5	21.2645575052878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	NA	False	NA	16	True	AATAAA	-26	NA	42271301	42332460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_8968.known	chr1	-	1007	12	FSM	ENSG00000234741.9	ENST00000451607.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	1105.66849006262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACAGCCTCAAACTTC	-173867718	False	NA	95	True	NA	NA	NA	173867729	173864033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867154
transcript_89682.known	chr8	+	1543	11	FSM	ENSG00000104365.16	ENST00000518647.5	1543	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	12.0648249054845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATGCTGCACTTTCTTG	42269992	True	NA	NA	False	ACTAAA	-13	NA	42271389	42317224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709
transcript_89684.nic	chr8	+	1439	15	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	43.9396617823922	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338449	42371808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42354416_42354522_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_89685.known	chr8	+	1341	15	FSM	ENSG00000070501.12	ENST00000522610.5	1341	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	46.4872705859423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTTGCAATGTAGT	42336911	True	NA	-27	True	TTTAAA	-19	NA	42338506	42371765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361095_42361203_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_89688.known	chr8	+	1290	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	27.6771325942384	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336898	True	NA	16	True	AATAAA	-17	NA	42338493	42371808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_89689.nic	chr8	+	1366	14	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	45.3981726817307	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336869	True	NA	16	True	AATAAA	-17	NA	42338464	42371808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42354416_42354522_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_89695.nic	chr8	+	1247	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	40.0217822636068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338449	42371808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_89697.nic	chr8	+	1261	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	27.1971965467031	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336869	True	NA	16	True	AATAAA	-17	NA	42338464	42371808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_897.known	chr1	-	939	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	21	18	-21	multi-exon	FALSE	canonical	3	7	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGCATTTCTCATCCTA	-9686019	True	NA	-19	True	AATAAA	-12	NA	9687555	9672425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9672720_9680711_9681136_9687334
transcript_89702.nic	chr8	+	1174	12	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	41.4330087596355	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336869	True	NA	16	True	AATAAA	-17	NA	42338464	42371808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_89723.known	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1118	junction_5	81.955272354295	2542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	42379441	True	NA	62	True	NA	NA	NA	42391879	42405937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
transcript_89734.known	chr8	+	784	8	FSM	ENSG00000078668.14	ENST00000521348.5	784	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	584.825213728209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGGTGCACGTGGTG	42379451	True	NA	NA	False	NA	NA	NA	42391889	42402164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42396677_42396681_42398711_42398865_42399650_42399704_42401787
transcript_89741.nic	chr8	-	879	2	ISM	ENSG00000168575.10	ENST00000518384.1	557	3	-151	62346	-21	8	5prime_fragment	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTACCATATTTTT	-42540288	True	NA	2	True	TTTAAA	-20	NA	42541732	42534651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_42535336_42541537
transcript_89743.known	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	290.050953378119	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	42540948	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
transcript_89744.known	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	117.941605136704	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	42535570	True	NA	14	True	AATAAA	-27	NA	42541612	42552980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
transcript_89745.known	chr8	+	3704	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	256.190467339352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGTATAGAGCCAAGTAA	42535542	True	NA	NA	False	AATAAA	-38	NA	42541584	42555195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
transcript_89747.nic	chr8	+	693	3	NIC	ENSG00000176209.12	novel	793	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	42535532	True	NA	14	True	AATAAA	-27	NA	42541574	42552980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42541706_42548655_42548781_42552543
transcript_89748.known	chr8	+	487	3	FSM	ENSG00000176209.12	ENST00000490331.2	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_1	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATTGTTCTGTGCATTG	42546414	False	NA	10	True	CATAAA	-23	NA	42546427	42552726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42546607_42548655_42548781_42552543
transcript_89749.known	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	14.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-42841029	True	NA	-6	True	ATTAAA	-18	NA	42843325	42836673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42838337_42839185_42839382_42843023
transcript_89752.known	chr8	-	1943	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAAGTGTCTTTTGTA	-42841009	True	NA	-8	True	ATTAAA	-16	NA	42843305	42836675	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42838337_42843023
transcript_89755.known	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	12.5418121559125	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	42894415	True	NA	96	True	AATAAA	-15	NA	42896977	43030535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
transcript_89761.known	chr8	-	4116	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	24.2950612265127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTTATTTTTCTGTT	-42896460	False	NA	0	True	AATAAA	-23	NA	42896723	42853296	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_89762.known	chr8	-	3764	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	9.16515138991168	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTGTTATTTTTC	-42896118	True	NA	-4	True	AATAAA	-19	NA	42896605	42853300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_89763.nic	chr8	-	1758	7	NIC	ENSG00000120925.16	novel	4116	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	21.0713075057055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42897039	True	NA	NA	False	NA	NA	NA	42897302	42855247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_89766.known	chr8	-	1338	7	FSM	ENSG00000120925.16	ENST00000526349.5	1338	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	30.4795013082563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	-42896443	False	NA	-5	True	AATAAA	-15	NA	42896706	42855706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887848_42887872_42896483
transcript_89768.nic	chr8	-	1299	7	NIC	ENSG00000120925.16	novel	4116	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	21.0713075057055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	-42897039	True	NA	-5	True	AATAAA	-15	NA	42897302	42855706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_89772.known	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	30.6555052152138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42896168	True	NA	NA	False	NA	NA	NA	42896655	42855247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_89773.known	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	22.8508205541945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	-42896101	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_89779.known	chr8	-	1169	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	9.01997782702374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-42896460	False	NA	NA	False	AAAAAG	-11	NA	42896723	42861329	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_89786.nnic	chr8	+	1950	9	NNC	ENSG00000168522.13	novel	874	7	NA	NA	-558	0	intron_retention	FALSE	canonical	1	3	junction_1	183.980934813909	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43055739	True	NA	24	True	AATAAA	-21	NA	43055749	43085785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_43056257_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_89787.known	chr8	+	1667	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	45.6124982872019	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43053572	True	NA	24	True	AATAAA	-21	NA	43056322	43085785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_89788.known	chr8	+	982	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	189.740961979909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	43053579	True	NA	NA	False	AAGAAA	-10	NA	43056329	43085193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_89789.nic	chr8	+	1383	7	NIC	ENSG00000168522.13	novel	1667	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	41	junction_1	188.215671209623	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43053655	True	NA	24	True	AATAAA	-21	NA	43056405	43085785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_43056547_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_8979.known	chr1	-	1771	6	FSM	ENSG00000120334.16	ENST00000367710.7	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	25.4746933249451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCGTTTATTATGTTTA	-173823806	False	NA	NA	False	AATAAA	-21	NA	173824174	173799849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_89791.known	chr8	+	750	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	245.456080592843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTAGCCTGTTGATTA	43053604	True	NA	NA	False	AATAAA	-35	NA	43056354	43070353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
transcript_89792.known	chr8	+	9535	4	FSM	ENSG00000185900.11	ENST00000676193.1	9535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.5108266385218	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTAGACATATGT	43086904	True	NA	15	True	AATAAA	-25	NA	43093497	43131180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43093564_43097523_43097616_43103527_43103831_43122106
transcript_89795.known	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	12.1452429044361	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	47256493	True	NA	NA	False	NA	NA	NA	47260937	47736306	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_898.nic	chr1	-	540	2	ISM	ENSG00000231789.3	ENST00000415330.3	978	3	-10	8440	-10	-8440	5prime_fragment	FALSE	canonical	3	77	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGTTGGCGTGATT	-9686047	True	NA	-4	True	CATAAA	-17	NA	9687583	9680844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_9681136_9687334
transcript_8980.known	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	11.1785508899857	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-173824515	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
transcript_89803.nic	chr8	+	1721	6	ISM	ENSG00000164808.17	ENST00000524141.5	2761	15	-51	315925	-9	9032	5prime_fragment	FALSE	canonical	3	127	junction_5	11.3066352200821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAGAACCTGTAG	47256459	True	NA	NA	False	AAAACA	-14	NA	47260903	47397516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375
transcript_89804.known	chr8	-	12784	85	FSM	ENSG00000253729.8	ENST00000338368.7	12784	85	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_6	206.55691621727	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGTTGATGTAACATT	-47930258	True	NA	NA	False	AGTAAA	-5	NA	47960178	47773734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_89806.nnic	chr8	+	3119	18	NNC	ENSG00000104738.18	novel	3157	18	NA	NA	0	-232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	378.224215371551	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTTACCTGGCATTA	47932113	True	NA	11	True	AATAAA	-16	NA	47960897	47977928	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685_47976983_47977736
transcript_89810.known	chr8	+	4062	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	130.354549570585	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932156	True	NA	8	True	AATAAA	-21	NA	47960940	47978160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_89815.nic	chr8	+	1620	9	ISM	ENSG00000104738.18	ENST00000648407.1	2598	15	0	10173	0	523	5prime_fragment	FALSE	canonical	3	1210	junction_1	119.357590353525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAGGTAGAAAATTGCT	47932113	True	NA	NA	False	ATTAAA	-18	NA	47960897	47966843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186
transcript_89816.nnic	chr8	+	1165	8	NNC	ENSG00000104738.18	novel	4062	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	531.163605219902	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932113	True	NA	8	True	AATAAA	-21	NA	47960897	47978160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47962958_47977736
transcript_89823.known	chr8	+	735	5	FSM	ENSG00000169139.12	ENST00000518360.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1827.07012728029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTACTCATGTTAATGT	47985091	True	NA	-49	True	NA	NA	NA	48008441	48060863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48050259_48050509_48060681
transcript_89825.known	chr8	+	1322	5	FSM	ENSG00000169139.12	ENST00000521346.5	1322	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2028.80291058545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAACAAAAAGGAAATAGG	47985068	True	NA	-64	True	NA	NA	NA	48008418	48061480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48034865_48035062_48043032_48043182_48049852_48049979_48060681
transcript_89828.known	chr8	+	4342	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	381.393060590602	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	47985080	True	NA	28	True	AATAAA	-19	NA	48008430	48064708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
transcript_89831.known	chr8	+	918	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	2086	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	47985064	True	NA	48	True	NA	NA	NA	48008414	48061417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48049852_48049979_48060681
transcript_89834.known	chr8	+	417	3	FSM	ENSG00000147481.17	ENST00000521574.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCGGAGGGGAGAAGG	49909759	True	NA	NA	False	AAAAAG	-20	NA	49909803	49911583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_49909905_49910891_49911045_49911420
transcript_89837.known	chr8	-	1204	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	50.2179250865664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTTGTTTTAGCT	-51895433	False	NA	7	True	AATAAA	-39	NA	51898970	51820146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
transcript_89838.known	chr8	-	4044	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	16.4389780704276	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	-51895499	True	NA	-13	True	AATAAA	-18	NA	51899036	51817582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_8984.known	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1906	junction_11	643.43628117622	4457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_89846.nnic	chr8	-	1329	3	NNC	ENSG00000168300.14	novel	1712	3	NA	NA	20	-580	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	61.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTATGTTCTCTTTAA	-51895629	True	NA	-1	True	AATAAA	-17	NA	51899166	51849524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_51850215_51860844_51861247_51898929
transcript_89847.known	chr8	-	856	2	FSM	ENSG00000168300.14	ENST00000521046.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTAAGAGAGACAGGAGA	-51895487	True	NA	NA	False	TATAAA	-36	NA	51899024	51860485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_51861247_51898929
transcript_8985.known	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1906	junction_9	700.20675958808	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_89850.known	chr8	-	1140	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGCTTTTGAAGTGTG	-52565209	True	NA	NA	False	ATTAAA	-16	NA	52565430	52534036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
transcript_89852.known	chr8	-	6636	24	FSM	ENSG00000023287.13	ENST00000025008.10	6636	24	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	51.2274663450043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTATTTAATCTTT	-52710990	True	NA	-9	True	AATAAA	-17	NA	52714435	52622457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_52623860_52624716_52624788_52628031_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_89853.known	chr8	-	6614	24	FSM	ENSG00000023287.13	ENST00000435644.6	6614	24	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_12	43.3015102964186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTTCTATTTAATCTT	-52710978	True	NA	-10	True	AATAAA	-16	NA	52714423	52622458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_52623860_52624716_52624788_52628040_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_89858.nic	chr8	-	1043	5	ISM	ENSG00000023287.13	ENST00000435644.6	6614	24	53414	34784	561	642	internal_fragment	FALSE	canonical	3	196	junction_3	28.0446073247603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAAAAGAACTACTGTC	-52660988	False	NA	NA	False	AGTAAA	-32	NA	52661009	52657242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925
transcript_8986.known	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	90	junction_4	1146.79008105233	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-173805433	True	NA	-36	True	AATAAA	-15	NA	173867989	173863899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_89861.nic	chr8	-	2291	14	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	78.486496784573	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	-53839452	False	NA	-1	True	AATAAA	-30	NA	53843013	53715669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842503
transcript_89862.known	chr8	-	1892	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	71.481615131271	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	-53839481	False	NA	-62	True	AAGAAA	-27	NA	53843042	53715730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_89864.known	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_7	45.3247323317716	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	-53839684	True	NA	2	True	AATAAA	-27	NA	53843245	53715542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_89867.nic	chr8	-	1888	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	86.0039970001395	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	-53839470	False	NA	-1	True	AATAAA	-30	NA	53843031	53715669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_89868.known	chr8	-	2365	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	64.7179242731272	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTCTATCAATCTATG	NA	False	NA	-12	True	AATAAA	-13	NA	53843558	53715556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_8987.known	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1906	junction_10	548.456279023223	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805433	True	NA	-37	True	AATAAA	-14	NA	173867989	173863900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_8988.known	chr1	-	3145	2	FSM	ENSG00000234741.9	ENST00000650796.1	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-173805435	True	NA	-67	True	ATTAAA	-7	NA	173867991	173863930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173867044_173867959
transcript_89885.nnic	chr8	-	1248	6	NNC	ENSG00000047249.18	novel	2365	13	NA	NA	-3308	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	121.74629357808	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	-53775262	False	NA	-1	True	AATAAA	-30	NA	53775373	53715669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53775001
transcript_89887.known	chr8	-	1672	3	FSM	ENSG00000047249.18	ENST00000521335.1	1672	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	20.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTCTACTAAAAATACAA	-53839698	True	NA	NA	False	NA	NA	NA	53843259	53831788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53833087_53841577_53841726_53843033
transcript_8989.known	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2175	junction_4	495.804621017415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_89893.known	chr8	-	2777	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	520.453031526084	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACATTTTGTCATTTTA	-54001146	True	NA	-2	True	AATAAA	-23	NA	54022448	53966555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_89897.known	chr8	-	2718	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	624.994799978368	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-54001146	True	NA	2	True	AATAAA	-27	NA	54022448	53966551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
transcript_899.nic	chr1	-	1070	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	48.0832611206852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-9941220	True	NA	-3	True	AATAAA	-23	NA	9943391	9922112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_8990.known	chr1	-	483	9	FSM	ENSG00000234741.9	ENST00000452197.5	483	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1270.89515696614	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805427	True	NA	-37	True	AATAAA	-14	NA	173867983	173863900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_89902.known	chr8	-	635	4	FSM	ENSG00000187735.15	ENST00000520534.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	48.7715764217917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGATTCAAATGGTTGC	-54022133	False	NA	NA	False	NA	NA	NA	54022148	53993375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53993756_53999944_54000051_54010429_54010493_54022062
transcript_89904.known	chr8	-	852	7	FSM	ENSG00000187735.15	ENST00000522397.5	852	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	681.941040951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGACTACTTGTAATGG	-54001146	True	NA	NA	False	AATATA	-36	NA	54022448	53970263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53970464_53986959_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022265
transcript_8991.known	chr1	+	2300	5	FSM	ENSG00000185278.15	ENST00000427304.5	2300	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.34477204006491	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATACTGGTGG	173867739	True	NA	NA	False	NA	NA	NA	173868354	173886636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173868406_173868924_173869121_173870196_173871149_173873466_173873567_173885635
transcript_8992.nic	chr1	+	1562	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_8	32.2335229225724	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	174870607	True	NA	NA	False	NA	NA	NA	174874382	174990409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_89930.known	chr8	-	2526	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	493.19048994785	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54101486	False	NA	-2	True	AATAAA	-23	NA	54101554	54046367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
transcript_89931.known	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	TRUE	canonical	3	1411	junction_6	92.2936041933568	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	-54086198	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_89936.nnic	chr8	-	2452	9	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	128	junction_6	487.435893220842	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54086176	True	NA	-2	True	AATAAA	-23	NA	54101925	54046367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065787_54065814_54100907_54100940_54101754
transcript_89950.nic	chr8	-	2426	8	NIC	ENSG00000120992.18	novel	2515	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_6	509.086496800386	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54086176	True	NA	-2	True	AATAAA	-23	NA	54101925	54046367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54100907_54100940_54101754
transcript_89951.known	chr8	-	1308	8	FSM	ENSG00000120992.18	ENST00000343231.10	1308	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	549.952205715577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTGTTTTTTCTT	-54086079	True	NA	37	True	AAGAAA	-4	NA	54101828	54047406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54065747_54065814_54100907_54100940_54101754
transcript_89957.known	chr8	-	2482	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_2	532.612927567708	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54101949	False	NA	-2	True	AATAAA	-23	NA	54102017	54046367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_89977.known	chr8	+	1729	5	FSM	ENSG00000137547.9	ENST00000260102.9	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_3	66.7921215413914	1288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGTTCAGCTCGATT	54123348	True	NA	NA	False	NA	NA	NA	54135240	54148514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381
transcript_8998.known	chr1	+	710	7	FSM	ENSG00000152061.24	ENST00000465412.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	32.8705372974374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAAGGAGTGAAATC	174870695	False	NA	NA	False	NA	NA	NA	174874470	174982900	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833
transcript_89987.known	chr8	-	2573	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	23.1384475516842	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-55770811	True	NA	-14	True	AATAAA	-1	NA	55773378	55738757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_9.known	ERCC-00031	+	1122	1	FSM	ERCC-00031A	DQ459431	1122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00031_+_0_1100
transcript_90.known	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_2	265	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_+_10792_10882_11058_11434
transcript_900.nic	chr1	-	973	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	54.8203001279859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-9941223	True	NA	-3	True	AATAAA	-23	NA	9943394	9922112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_90001.nic	chr8	-	1329	5	ISM	ENSG00000167904.16	ENST00000434581.7	2573	8	5	11783	5	346	5prime_fragment	FALSE	canonical	3	128	junction_1	22.8514222752108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAGAATTTGAATGTCA	-55770806	True	NA	NA	False	AAAAAG	-1	NA	55773373	55750540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_90003.known	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	78.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	-55770811	True	NA	-87	True	ATTAAA	-29	NA	55773378	55762399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55763029_55763935_55763981_55773226
transcript_90004.known	chr8	-	2400	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	24.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	-55770800	True	NA	NA	False	ATTAAA	-18	NA	55773367	55760772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55763029_55763935_55763981_55773268
transcript_90008.known	chr8	+	4477	13	FSM	ENSG00000137574.11	ENST00000260129.6	4477	13	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	18.3626659284539	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGTGTTCTAGTCT	55768491	True	NA	NA	False	GATAAA	-38	NA	55773445	55826445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580
transcript_9001.known	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	60.1793615416079	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	174870682	True	NA	14	True	AATAAA	-20	NA	174874457	174958182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
transcript_90012.known	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	4338.02545968657	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869825	True	NA	-5	True	AATAAA	-19	NA	56074510	56073053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
transcript_90013.known	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_3	183.571965906199	22546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869821	True	NA	-5	True	AATAAA	-19	NA	56074506	56073053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_90014.known	chr8	-	752	3	FSM	ENSG00000008988.11	ENST00000524349.5	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	9198	junction_2	181	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCAGAATACTGGCAG	-55869821	True	NA	7	True	AATAAA	-31	NA	56074506	56073041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56073694_56073769_56074059
transcript_90015.known	chr8	-	1826	6	FSM	ENSG00000008988.11	ENST00000519807.5	1826	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4559.00382101178	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGTGAATAATGCTATA	-55869824	True	NA	-49	True	TTTAAA	-45	NA	56074509	56067294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56068531_56069702_56069834_56073116_56073273_56073694_56073769_56074059_56074160_56074380
transcript_90016.known	chr8	-	424	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_1	4512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGACCAGTTGTTA	-55869821	True	NA	-26	True	NA	NA	NA	56074506	56073074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56074059_56074160_56074380
transcript_90017.known	chr8	-	1684	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCTTTTAAACTGAGC	-56209741	True	NA	NA	False	TATAAA	-6	NA	56211300	56166098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56167504_56171090_56171190_56211120
transcript_9002.nnic	chr1	+	494	3	NIC	ENSG00000152061.24	novel	648	4	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	47	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	174870627	True	NA	19	True	AATAAA	-25	NA	174874402	174958187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_174874507_174957456_174957550_174957890
transcript_90021.known	chr8	+	559	6	FSM	ENSG00000170791.18	ENST00000523667.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	112.097457598288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAATGTTTGCATTAAA	56200999	True	NA	-27	True	NA	NA	NA	56211788	56217429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216507_56216679_56216755_56217330
transcript_90022.known	chr8	+	567	6	FSM	ENSG00000170791.18	ENST00000523532.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	106.168545247639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGGAAATATGCCCTAT	56200999	True	NA	-44	True	NA	NA	NA	56211788	56217412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56216679_56216755_56217330
transcript_90023.known	chr8	+	552	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	227.025461127161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	56200999	True	NA	-15	True	NA	NA	NA	56211788	56217441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
transcript_90029.known	chr8	+	703	5	FSM	ENSG00000170791.18	ENST00000521524.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	103.250605325102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGCTTTTCCACTGGGT	56201020	True	NA	NA	False	NA	NA	NA	56211809	56217689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216507_56217330
transcript_9003.known	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	98.4287672493272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	174874771	False	NA	19	True	AATAAA	-25	NA	174875545	174958187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
transcript_90030.known	chr8	+	1670	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.10078941735	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	56201008	True	NA	17	True	AATAAA	-20	NA	56211797	56218619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
transcript_90032.known	chr8	+	1805	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.675170804153	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	56201008	True	NA	NA	False	NA	NA	NA	56211797	56218798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
transcript_90036.nic	chr8	+	623	5	NIC	ENSG00000170791.18	novel	567	6	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	238.3792933541	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGATGAATATTTCT	56200921	True	NA	9	True	ATTAAA	-17	NA	56211710	56217465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56217330
transcript_90037.nic	chr8	+	1777	5	NIC	ENSG00000170791.18	novel	1670	5	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	238.3792933541	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	56200921	True	NA	17	True	AATAAA	-20	NA	56211710	56218619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56217330
transcript_90039.known	chr8	+	1550	5	FSM	ENSG00000170791.18	ENST00000396723.9	1550	5	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	238.494627822096	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGAGTCTAAAACCAAG	56201009	True	NA	-78	True	AATGAA	-6	NA	56211798	56218524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56217330
transcript_90044.known	chr8	+	573	4	FSM	ENSG00000170791.18	ENST00000521831.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	236.322284650056	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTCAAGTGGAGA	56200896	True	NA	51	True	NA	NA	NA	56211685	56217538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56214597_56214668_56216388_56216532_56217330
transcript_90046.known	chr8	+	557	4	FSM	ENSG00000170791.18	ENST00000523061.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	261.10576826685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGAGTATGATGTGAA	56201018	True	NA	NA	False	NA	NA	NA	56211807	56217713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56214597_56214668_56216432_56216507_56217330
transcript_90048.known	chr8	+	1697	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	150.019998666844	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	56200999	True	NA	NA	False	NA	NA	NA	56211788	56218809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
transcript_90052.known	chr8	-	1251	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCCTTGTAAGTCTCT	-56446567	True	NA	NA	False	AATAAA	-19	NA	56446641	56440956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
transcript_90054.nic	chr8	+	1324	10	NIC	ENSG00000215114.10	novel	1225	9	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_7	87.2503139475762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCCAATCTGAATATA	58407220	True	NA	28	True	GATAAA	-21	NA	58411354	58447684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857_58434949_58439632_58439771_58445906_58446069_58447388
transcript_90055.known	chr8	+	1225	9	FSM	ENSG00000215114.10	ENST00000523409.5	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	80.4129964620148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCCAATCTGAATATA	58407246	True	NA	28	True	GATAAA	-21	NA	58411380	58447684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857_58434949_58439632_58439771_58445906_58446069_58447388
transcript_90060.known	chr8	+	4971	8	FSM	ENSG00000215114.10	ENST00000399598.7	4971	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	29.2372421156752	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	58407226	True	NA	13	True	AATAAA	-22	NA	58411360	58451501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
transcript_90064.known	chr8	+	717	7	FSM	ENSG00000215114.10	ENST00000522978.1	717	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	91.1604202613295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTTAGTTTGAAGT	58407224	True	NA	NA	False	NA	NA	NA	58411358	58434941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_90065.nic	chr8	+	819	6	ISM	ENSG00000215114.10	ENST00000523409.5	1225	9	-32	12578	-10	0	5prime_fragment	FALSE	canonical	3	62	junction_5	71.8721086374958	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	58407214	True	NA	NA	False	AATAAA	-27	NA	58411348	58435106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_90073.known	chr8	+	1277	9	FSM	ENSG00000137575.12	ENST00000424270.6	1277	9	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_2	295.370503562898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAACCAGTCACC	58543459	True	NA	NA	False	NA	NA	NA	58553236	58582056	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58553304_58565018_58565067_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_90075.known	chr8	+	2073	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_4	92.6437228040842	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	58543483	True	NA	26	True	AATAAA	-19	NA	58553260	58582858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_90077.known	chr8	-	3574	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_24	18.7980199902957	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-58659804	False	NA	NA	False	ATTAAA	-17	NA	58659853	58583507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_90079.known	chr8	+	3207	2	FSM	ENSG00000167912.7	ENST00000665670.1	3207	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATGCAATAAGTAATATC	59119036	True	NA	NA	False	TTTAAA	-14	NA	59119221	59123478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_59119286_59120335
transcript_9008.known	chr1	+	2835	6	FSM	ENSG00000116161.18	ENST00000613570.4	2835	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	1196.81400392876	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTATAAAAACAA	174999151	False	NA	NA	False	AATAAA	-24	NA	174999162	175011715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174999690_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_90083.known	chr8	+	1106	2	FSM	ENSG00000167912.7	ENST00000517898.1	1106	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTTTAAAAATAAAACTT	59119839	False	NA	-25	True	NA	NA	NA	59119945	59121315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_59120072_59120335
transcript_90087.known	chr8	-	5735	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	9.73315853153538	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGACTATTCATTTC	-60280774	True	NA	1	True	ATTAAA	-22	NA	60281400	60185411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_90089.known	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	99.4769997003717	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	60501195	True	NA	20	True	AATAAA	-34	NA	60516986	60623644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_90092.known	chr8	+	594	6	FSM	ENSG00000104388.15	ENST00000429861.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	104.851514056784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTTCTGTCAGAC	60517223	False	NA	NA	False	CATAAA	-35	NA	60517235	60592117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857
transcript_90093.known	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_15	28.7396311533614	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	60675895	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
transcript_90095.known	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	153.053612450094	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	-61707311	True	NA	NA	False	AATAAA	-20	NA	61714596	61623709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_90097.known	chr8	-	2744	13	FSM	ENSG00000198363.18	ENST00000518068.5	2744	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	193.752562707066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATTGTCATTATTTTT	-61707283	True	NA	-14	True	AATAAA	-15	NA	61714568	61624538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_90098.known	chr8	-	3717	13	FSM	ENSG00000198363.18	ENST00000445642.6	3717	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	195.870847470697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	-61707355	True	NA	NA	False	AATAAA	-20	NA	61714640	61623709	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_90100.known	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	256.549323825957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	-61707302	True	NA	-10	True	AATAAA	-20	NA	61714587	61656127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
transcript_90103.known	chr8	+	20374	7	FSM	ENSG00000185942.13	ENST00000623646.3	20374	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.92442890089805	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTACTGTTTTTAATA	62248829	True	NA	NA	False	AATAAA	-20	NA	62248853	62984904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_62249128_62579538_62579677_62589713_62589795_62746931_62747130_62918452_62918514_62953901_62953973_62965353
transcript_90105.known	chr8	-	1449	9	FSM	ENSG00000137563.13	ENST00000677482.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	169.461463170834	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTATGTGTGTGCATGTG	-63033663	True	NA	90	True	NA	NA	NA	63038867	63014880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63015454_63017492_63017631_63023906_63023940_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90108.known	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	39.6703210851639	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	-63033602	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90113.known	chr8	-	3813	8	FSM	ENSG00000137563.13	ENST00000677327.1	3813	8	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	35.5119985471999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGAGTGTTTTTCAT	NA	False	NA	-22	True	ATTAAA	-10	NA	63039407	63015153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90115.known	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	173.195890039373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	-63033597	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90119.known	chr8	+	2370	6	FSM	ENSG00000185728.17	ENST00000621413.4	2370	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	212.739841120557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGTAATTATGCAT	63152625	True	NA	NA	False	NA	NA	NA	63168660	63209955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386_63169412_63172652_63172799_63175330_63175417_63186146_63187746_63209682
transcript_90120.known	chr8	+	5095	5	FSM	ENSG00000185728.17	ENST00000539294.6	5095	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	38.3169348982927	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	63152585	True	NA	12	True	AATAAA	-14	NA	63168620	63212786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63186146_63187746_63209682
transcript_90123.known	chr8	+	5076	4	FSM	ENSG00000185728.17	ENST00000617200.1	5076	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	189.846136530496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGTTCTTTCCATT	63152517	True	NA	11	True	AATAAA	-13	NA	63168552	63212785	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386_63169412_63186146_63187746_63209682
transcript_90124.known	chr8	+	445	2	FSM	ENSG00000185728.17	ENST00000522282.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTCCCTCTTGGGAA	63152526	True	NA	NA	False	TTTAAA	-23	NA	63168561	63169491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386
transcript_90125.known	chr8	+	2387	5	FSM	ENSG00000185728.17	ENST00000621957.4	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	180.626686843334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTCGATTTTTAGCT	63152616	True	NA	NA	False	NA	NA	NA	63168651	63210115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386_63169412_63175336_63175417_63186146_63187746_63209682
transcript_90127.known	chr8	+	1000	2	FSM	ENSG00000254377.7	ENST00000520799.5	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGTACCAGAGGGGTAA	64373303	False	NA	NA	False	AGTAAA	-21	NA	64373327	64378834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_64373552_64378058
transcript_90129.known	chr8	-	3000	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_4	14.8772757362809	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTGTGGTATAAGCAT	-65630638	True	NA	-14	True	AATAAA	-32	NA	65634177	65602457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
transcript_9013.known	chr1	+	2869	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_4	112.51915392501	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	174950661	True	NA	NA	False	NA	NA	NA	174999946	175012027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_90131.nic	chr8	+	1887	9	NIC	ENSG00000066855.16	novel	2651	8	NA	NA	-34	402	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	62.0382946251749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCAGCTTTTTTCTC	65640502	True	NA	NA	False	AATAAA	-20	NA	65644699	65726002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65719379_65719482_65725315
transcript_90132.known	chr8	+	2651	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	17.7798326476824	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	65640536	True	NA	15	True	AATAAA	-29	NA	65644733	65710562	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_90138.known	chr8	+	1972	14	FSM	ENSG00000147576.17	ENST00000396623.8	1972	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	9.7337332062358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCATAATATACTGGG	66432380	True	NA	107	True	AATAAA	-23	NA	66432503	66468907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66454058_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_90140.known	chr8	+	2179	13	FSM	ENSG00000147576.17	ENST00000426810.5	2179	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	9.21954445729289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	66432377	True	NA	9	True	AATAAA	-14	NA	66432500	66468809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66432576_66440161_66440200_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_90141.known	chr8	+	1830	13	FSM	ENSG00000147576.17	ENST00000276576.11	1830	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	10.5185022169931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTAAGTATTCATTATT	66432375	True	NA	7	True	AATAAA	-12	NA	66432498	66468807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66432576_66440161_66440200_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66454058_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_90143.known	chr8	+	1720	1	FSM	ENSG00000179041.4	ENST00000320270.4	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACTGGGTAGA	66422198	True	NA	33	True	AATAAA	-27	NA	66429013	66430733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66429000_66430700
transcript_90148.known	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.3137084989848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666088	False	NA	3	True	AATAAA	-15	NA	66667651	66678295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
transcript_90150.nic	chr8	+	531	3	NIC	ENSG00000288596.2	novel	598	4	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665997	True	NA	3	True	AATAAA	-15	NA	66667560	66678295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_66667702_66677641_66677955_66678218
transcript_90151.nic	chr8	+	939	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-77	0	-40	0	intron_retention	FALSE	canonical	3	35	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666011	True	NA	3	True	AATAAA	-15	NA	66667574	66678295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_90153.known	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	66666051	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66667702_66679720_66680025_66685380
transcript_90154.nic	chr8	+	797	2	ISM	ENSG00000288596.2	ENST00000661636.1	1835	3	-57	2861	-54	2	5prime_fragment	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTTTGTGTTTTTTT	66665997	True	NA	5	True	AATAAA	-17	NA	66667560	66678297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_66667702_66677641
transcript_90155.known	chr8	+	4106	17	FSM	ENSG00000104205.16	ENST00000521198.7	4106	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.4766870465259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGTCATTATTTG	66712665	True	NA	6	True	AATAAA	-18	NA	66712780	66862022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66712834_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_90156.known	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	8.07363572066513	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	66774281	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_90163.known	chr8	+	1831	9	FSM	ENSG00000178460.18	ENST00000492775.5	1831	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTGAACAGATTATGT	66870776	False	NA	NA	False	AATAAA	-18	NA	66870789	66884622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66870832_66874052_66874235_66874325_66874457_66874526_66874587_66877348_66877545_66878573_66878697_66878814_66878920_66880848_66880975_66883756
transcript_90167.known	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	651	junction_3	86.5036929205273	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	-66908793	True	NA	96	True	NA	NA	NA	66925596	66921817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
transcript_9017.known	chr1	+	1059	6	FSM	ENSG00000116161.18	ENST00000405362.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	1223.10146758149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAAAGTCGTTTTGGG	175000111	False	NA	NA	False	NA	NA	NA	175000212	175010079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_175000600_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_90171.known	chr8	-	302	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	60	0	-1	multi-exon	FALSE	canonical	3	174	junction_2	330.5	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGCTAACTTTTAAT	-66908738	True	NA	-73	True	AATAAA	-17	NA	66925541	66921986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922323_66922393_66925436
transcript_90173.known	chr8	-	648	3	FSM	ENSG00000245910.9	ENST00000686474.1	1806	3	35	1123	0	134	multi-exon	FALSE	canonical	3	71	junction_1	290	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCACCTTTTTTATTCA	-66908738	True	NA	NA	False	GATAAA	-1	NA	66925541	66921683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922613_66922726_66925436
transcript_90178.known	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-66908738	True	NA	NA	False	NA	NA	NA	66925541	66922270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922726_66925436
transcript_90180.known	chr8	-	479	4	FSM	ENSG00000245910.9	ENST00000520619.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	389.144646057935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATCACAATAAATTATG	-66926325	False	NA	-104	True	NA	NA	NA	66926398	66922017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66926197
transcript_90181.known	chr8	+	4317	25	FSM	ENSG00000104218.16	ENST00000678747.1	4317	25	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	16.7032930884901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTGGAGCACTTACC	67062248	False	NA	NA	False	ATTAAA	-15	NA	67064524	67196778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90182.known	chr8	+	3822	25	FSM	ENSG00000104218.16	ENST00000678318.1	3822	25	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	15.8710078094899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTTTATGCCAATGAA	67062091	True	NA	NA	False	NA	NA	NA	67064367	67196168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90185.known	chr8	+	4476	30	FSM	ENSG00000104218.16	ENST00000262210.11	4476	30	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	13.3495937314321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAACTACTATGGAG	67062063	True	NA	NA	False	AATAAA	-22	NA	67064339	67196263	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90188.known	chr8	+	4302	18	FSM	ENSG00000104218.16	ENST00000678156.1	4302	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	17.8985994310084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATAATTGTTCCTATG	67062059	True	NA	NA	False	TATAAA	-3	NA	67064335	67166342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390
transcript_90198.nic	chr8	-	1431	9	NIC	ENSG00000121022.14	novel	1451	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	219.789636641494	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	-67062302	False	NA	NA	False	AATAAA	-17	NA	67062349	67043078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853_67062025_67062105
transcript_902.known	chr1	-	4989	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	24.4682217897219	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-9941220	True	NA	-1	True	AATAAA	-35	NA	9943391	9926292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_9020.known	chr1	+	804	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_4	121.727153913989	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATTTTTAATAGTTT	174950669	True	NA	NA	False	TTTAAA	-24	NA	174999954	175008754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
transcript_90200.known	chr8	-	1296	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_7	43.1367072248692	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	-67055434	True	NA	NA	False	AATAAA	-17	NA	67062133	67043078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
transcript_90208.known	chr8	-	400	3	FSM	ENSG00000178125.15	ENST00000520633.1	400	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGGATTTGTTCTAA	-67028518	True	NA	NA	False	AATAAA	-17	NA	67028537	67010617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67010832_67012957_67013097_67028490
transcript_90209.known	chr8	-	7320	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_34	56.6389217016315	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	-67340066	True	NA	-14	True	AATAAA	-33	NA	67343781	67197657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_90212.known	chr8	+	1113	1	FSM	ENSG00000271966.1	ENST00000607397.1	1113	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATTTCTTTTATTTTT	67343947	True	NA	NA	False	AATAAA	-15	NA	67343974	67345087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67344000_67345100
transcript_90213.known	chr8	-	2011	11	FSM	ENSG00000165078.13	ENST00000297770.10	2011	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.66332495807108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGGGCTGAGGCGGGC	NA	False	NA	NA	False	AATAAA	-39	NA	67746360	67422037	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67422692_67428046_67428132_67434037_67434241_67483767_67483859_67484678_67484790_67506786_67506889_67509516_67509619_67511540_67511656_67517922_67518048_67624175_67624252_67746013
transcript_90214.known	chr8	-	1870	10	FSM	ENSG00000165078.13	ENST00000638254.1	1870	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.684934889218775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	NA	False	NA	NA	False	AATAAA	-5	NA	67746378	67422071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67422692_67428046_67428132_67434037_67434241_67483767_67483859_67484678_67484790_67506786_67506889_67509516_67509619_67511540_67511656_67624175_67624252_67746013
transcript_90215.known	chr8	+	550	2	FSM	ENSG00000255130.1	ENST00000526382.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGCAGTCTTTTTTTT	67732518	False	NA	NA	False	ATTAAA	-18	NA	67732586	67735665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67732666_67735194
transcript_90220.known	chr8	-	2842	3	FSM	ENSG00000248801.7	ENST00000660308.1	2842	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCATTATGAAATG	-68331346	True	NA	NA	False	AATGAA	-9	NA	68331511	68302245	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_68304802_68306517_68306599_68331306
transcript_90222.known	chr8	-	1684	4	FSM	ENSG00000248801.7	ENST00000512294.7	1684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCATTGAATAAAAATG	-68331344	True	NA	-39	True	NA	NA	NA	68331509	68303505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_68304802_68306517_68306599_68308859_68308964_68331306
transcript_90225.nic	chr8	+	1503	9	ISM	ENSG00000137573.14	ENST00000458141.6	5551	22	143	59056	-50	4267	5prime_fragment	FALSE	canonical	2	78	junction_4	7.06996287118964	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTACCTCAAGTGTGTC	69465116	True	NA	NA	False	NA	NA	NA	69466766	69601859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653
transcript_90226.nic	chr8	+	2004	9	ISM	ENSG00000137573.14	ENST00000458141.6	5551	22	20	58678	20	4645	5prime_fragment	FALSE	canonical	2	78	junction_4	7.06996287118964	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAAAGCTGGCTTTTC	69464993	True	NA	NA	False	GATAAA	-1	NA	69466643	69602237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653
transcript_90229.known	chr8	+	1256	2	FSM	ENSG00000246528.4	ENST00000528800.3	1298	2	39	3	-24	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTTCCTGATCTTC	69834047	True	NA	NA	False	AATAAA	-21	NA	69834128	69837829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_69834194_69836638
transcript_90235.known	chr8	-	2269	8	FSM	ENSG00000147596.4	ENST00000276594.3	2269	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_7	31.6518046040645	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCCAACACTTTGGGA	-70065129	True	NA	NA	False	NA	NA	NA	70071252	70051650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70069160_70069885_70071149
transcript_90244.known	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_6	40.2055966253456	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-70599412	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_90251.known	chr8	-	1526	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5669482563998	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGATAAATAATTATT	-70666531	True	NA	99	True	ATTAAA	-17	NA	70669185	70637265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_90256.known	chr8	+	817	4	FSM	ENSG00000246366.6	ENST00000518553.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTTAAACATTTCTGAGT	70608566	True	NA	NA	False	AATAAA	-17	NA	70608603	70653981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_70608834_70651812_70651895_70652534_70652753_70653694
transcript_90260.nnic	chr8	+	671	4	NIC	ENSG00000254277.2	novel	473	3	NA	NA	-78	-1	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	46.54985380094	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTGGAAACAACAAAAATG	71675208	False	NA	NA	False	AGTAAA	-14	NA	71675221	71702434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_71675536_71695940_71696034_71697626_71697671_71702214
transcript_90264.nnic	chr8	+	572	3	FSM	ENSG00000254277.2	ENST00000693596.1	452	3	-121	1	-72	-1	multi-exon	FALSE	canonical	3	67	junction_1	73.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTGGAAACAACAAAAATG	71675214	False	NA	NA	False	AGTAAA	-14	NA	71675227	71702434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71697626_71697671_71702214
transcript_90265.nnic	chr8	+	1752	3	FSM	ENSG00000254277.2	ENST00000693596.1	452	3	-57	-1243	-8	892	multi-exon	FALSE	canonical	3	67	junction_1	73.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTTGTTTTTGTTTGTT	71663377	True	NA	31	True	GATAAA	-15	NA	71675291	71703678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71697626_71697671_71702214
transcript_90269.known	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	54	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	71663462	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71695940_71696034_71702214
transcript_90274.nnic	chr8	+	1520	3	FSM	ENSG00000254277.2	ENST00000691315.1	1454	3	-66	0	-17	0	multi-exon	FALSE	canonical	3	37	junction_2	5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTTTGGCCTATTT	71663368	True	NA	15	True	AATAAA	-19	NA	71675282	71756667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71753654_71753739_71755484
transcript_90280.known	chr8	+	808	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTGTGTTTTCAGT	71663385	True	NA	NA	False	NA	NA	NA	71675299	71702786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71702214
transcript_90284.known	chr8	-	1956	2	FSM	ENSG00000178860.9	ENST00000325509.5	1956	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTTGGAGGTGTCAGG	-71844136	True	NA	-17	True	AATAAA	-43	NA	71844412	71841559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_71842748_71843644
transcript_90291.known	chr8	+	2764	11	FSM	ENSG00000147601.15	ENST00000679115.1	2764	11	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_9	2054.7239230612	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959185	True	NA	NA	False	AATAAA	-7	NA	73008859	73047479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73039544_73039620_73045960
transcript_90293.known	chr8	+	2933	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	2048.54521701935	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	72959189	True	NA	-14	True	NA	NA	NA	73008863	73047711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_90297.known	chr8	+	3329	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_7	1424.6238836537	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	72959189	True	NA	10	True	AATATA	-15	NA	73008863	73048123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_903.known	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	38.4447655734822	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	NA	False	NA	-24	True	CATAAA	-14	NA	9943407	9930252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_90300.known	chr8	+	2715	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	2013.86725812138	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959189	True	NA	NA	False	AATAAA	-7	NA	73008863	73047479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
transcript_9031.known	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	517	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	-175014741	True	NA	-49	True	NA	NA	NA	175023415	175014244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_175014852_175018417_175018577_175023271
transcript_90313.known	chr8	+	3268	9	FSM	ENSG00000147601.15	ENST00000276602.10	3268	9	0	0	0	0	multi-exon	FALSE	canonical	3	3332	junction_6	606.236082314473	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	72959189	True	NA	9	True	AATATA	-14	NA	73008863	73048122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_90316.known	chr8	+	3178	9	FSM	ENSG00000147601.15	ENST00000678518.1	3178	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	2003.87514815045	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	72959189	True	NA	9	True	AATATA	-14	NA	73008863	73048122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_9032.known	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	62.5	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-175014751	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_175014852_175018417_175018577_175023363
transcript_90321.nic	chr8	+	1149	8	ISM	ENSG00000147601.15	ENST00000677031.1	1934	10	-85	10643	-77	3658	5prime_fragment	FALSE	canonical	3	1645	junction_7	1542.84104488956	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGTTATAACAGTTT	73008758	False	NA	6	True	AAGAAA	-28	NA	73008778	73032135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041
transcript_90326.nic	chr8	+	1089	7	ISM	ENSG00000147601.15	ENST00000678860.1	2715	10	-85	15344	-77	3658	5prime_fragment	FALSE	canonical	3	3332	junction_6	675.431323098227	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGTTATAACAGTTT	73008758	False	NA	6	True	AAGAAA	-28	NA	73008778	73032135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041
transcript_90340.known	chr8	-	1233	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	22642	junction_1	5489.87466968863	3182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTCTTGTTTTGC	-73216371	True	NA	0	True	TATAAA	-38	NA	73293633	73290241	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_90345.known	chr8	-	1526	6	FSM	ENSG00000147604.14	ENST00000396467.5	1526	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	14516.7662735197	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGCCATGTAAATGT	-73216371	True	NA	-42	True	NA	NA	NA	73293633	73290283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292796_73293598
transcript_90351.known	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_12	137.123826804648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	-73742413	True	NA	-4	True	AGTAAA	-24	NA	73746840	73420368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_9036.known	chr1	-	4548	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	4.18993502999218	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	-175191525	True	NA	0	True	AATAAA	-21	NA	175192776	175156985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
transcript_90365.known	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_2	45.3677352857587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	-73742413	True	NA	-19	True	AGTAAA	-23	NA	73746840	73549603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90369.known	chr8	-	1603	10	FSM	ENSG00000040341.18	ENST00000523558.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	151.15416053458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGATCCTGCTACTGG	-73742413	True	NA	42	True	NA	NA	NA	73746840	73421129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73746782
transcript_90370.known	chr8	-	1695	10	FSM	ENSG00000040341.18	ENST00000517542.5	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	125.355888435415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATCTATCTAGTAAT	-73742452	True	NA	NA	False	AAAAAG	-29	NA	73746879	73551829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
transcript_90372.known	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	176.419953520003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	-73742391	True	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_90375.known	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	138.278559437101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	-73742413	True	NA	-3	True	ATTAAA	-29	NA	73746840	73652256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90381.known	chr8	-	2268	7	FSM	ENSG00000104343.21	ENST00000651945.1	2268	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	119.512435429215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAATTAAAAC	-73872742	True	NA	-34	True	NA	NA	NA	73878862	73792362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73870268_73870302_73878807
transcript_90382.nnic	chr8	-	738	6	NNC	ENSG00000258677.2	novel	776	8	NA	NA	-58	-87631	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	101.996078355984	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTGTGGTACTTTAT	-73872792	False	NA	-3	True	AATAAA	-19	NA	73878912	73776321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_73776528_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_90384.known	chr8	-	8426	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	31.5467906450086	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTGGCTTTTTTTA	-73872790	True	NA	-3	True	AATAAA	-17	NA	73878910	73786219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_90386.known	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	97.7941076957094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-73872755	True	NA	-12	True	AATAAA	-24	NA	73878875	73790604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
transcript_90396.known	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1781.98496065483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	-73971894	False	26019	45	True	NA	NA	NA	73971908	73946533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
transcript_90399.known	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_4	1756.52049518359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	-73946233	True	NA	-121	True	NA	NA	NA	73972252	73946699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
transcript_90401.known	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	1847.14365643282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-73946213	True	NA	-82	True	NA	NA	NA	73972232	73946472	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
transcript_90402.known	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	18	junction_4	1850.40738757712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-73971894	False	26019	NA	False	NA	NA	NA	73971908	73945137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
transcript_9042.known	chr1	+	9843	18	FSM	ENSG00000075391.17	ENST00000367649.8	9843	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.49922597465957	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGACTAAAGTTGCTAC	178093653	True	NA	NA	False	AATAAA	-16	NA	178094103	178478850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456720_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
transcript_90427.known	chr8	-	2015	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	2357	junction_3	664.922551881044	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73946172	True	NA	NA	False	NA	NA	NA	73972191	73945118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
transcript_90428.known	chr8	-	1943	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	1408.27767148386	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73946268	True	NA	NA	False	NA	NA	NA	73972287	73945118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
transcript_9043.nnic	chr1	+	849	3	Fusion	ENSG00000213057.5_ENSG00000273384.1	novel	2577	3	NA	NA	-52	17	multi-exon	FALSE	canonical	0	0	junction_2	2.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGCTTTGTGCTTTATT	178542528	True	NA	NA	False	CATAAA	-42	NA	178542699	178652299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_178542886_178547093_178547164_178651706
transcript_90430.known	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	1721.28756716851	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	-73946087	True	NA	-10	True	AATAAA	-13	NA	73972106	73946400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
transcript_90442.known	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1899.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	-73946151	True	NA	2	True	AATAAA	-37	NA	73972170	73945607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73972076
transcript_90454.known	chr8	+	928	4	FSM	ENSG00000175606.11	ENST00000416961.6	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	132.467186712618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAAGAGAAACGGCAT	73970272	True	NA	NA	False	AAGAAA	-1	NA	73976194	73981586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73976492_73978755_73978862_73979078_73979172_73981154
transcript_90457.known	chr8	+	2032	3	FSM	ENSG00000175606.11	ENST00000312184.6	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	11	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTAAAATTGCTGTC	73970272	True	NA	10	True	ATTAAA	-14	NA	73976194	73982783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73976492_73978755_73978862_73981154
transcript_90461.known	chr8	+	1118	2	FSM	ENSG00000253983.3	ENST00000670556.1	1118	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGTGTACAATTCAG	NA	False	NA	NA	False	CATAAA	-17	NA	74165901	74208536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74166204_74207720
transcript_90462.known	chr8	+	2471	7	FSM	ENSG00000104381.14	ENST00000434412.3	2471	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.2248992175074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTAGCAGCTTTTATAA	74346824	True	NA	16	True	AATAAA	-31	NA	74350402	74365834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351322_74351453_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_90463.known	chr8	+	3616	6	FSM	ENSG00000104381.14	ENST00000675165.1	3616	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.9312297331855	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATGAACCCTAA	74346824	True	NA	NA	False	AATAAA	-10	NA	74350402	74366850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363987
transcript_90465.known	chr8	+	945	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	52.6513057767801	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	74346834	True	NA	NA	False	AATAAA	-25	NA	74350412	74488879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
transcript_90467.known	chr8	+	3273	5	FSM	ENSG00000104381.14	ENST00000675336.1	3273	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	70.1654295219519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTAAGATCAATAAAAG	74346824	True	NA	NA	False	NA	NA	NA	74350402	74366823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351322_74361883_74361979_74362938_74363054_74363984
transcript_90468.known	chr8	+	2378	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	65.9786897414612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCCGATTTACAAAAAA	74346816	True	NA	-43	True	NA	NA	NA	74350394	74365775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
transcript_90472.known	chr8	-	590	2	FSM	ENSG00000253596.1	ENST00000521872.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTTTATTTCTTTATG	-74350005	False	NA	NA	False	AATATA	-2	NA	74350050	74347756	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_74348206_74349909
transcript_90478.known	chr8	-	773	4	FSM	ENSG00000253706.5	ENST00000523860.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	21.9241115365405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTCAATTGAGGT	-74866714	True	NA	NA	False	TTTAAA	-28	NA	74866925	74798783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_74799320_74818609_74818669_74866517_74866635_74866864
transcript_90479.known	chr8	-	2810	3	FSM	ENSG00000253706.5	ENST00000518128.5	2810	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGGAACTATGTTG	-74866728	True	NA	NA	False	AATAAA	-17	NA	74866939	74816050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_74818669_74866517_74866635_74866864
transcript_9048.known	chr1	+	1970	10	FSM	ENSG00000116191.19	ENST00000495034.5	1970	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	10.6144555520604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178721449	True	NA	NA	False	AAAAAG	-16	NA	178725164	178879788	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901
transcript_90484.known	chr8	+	4297	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_14	26.309868560551	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCATTGTAATTATTT	74983020	True	NA	64	True	ATTAAA	-27	NA	74984504	75034558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
transcript_90488.known	chr8	-	1484	3	FSM	ENSG00000249395.4	ENST00000675897.1	1484	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTCTATAGCTAA	NA	False	NA	-18	True	AATAAA	-12	NA	75324711	75223134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75324220_75324334_75324564
transcript_9049.nnic	chr1	+	1018	7	NNC	ENSG00000116191.19	novel	1970	10	NA	NA	-25	-66513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.6754192024343	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCATTATTATTTTCTG	178721478	True	NA	NA	False	AATAAA	-21	NA	178725193	178813275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178812953
transcript_90490.known	chr8	-	1218	2	FSM	ENSG00000249395.4	ENST00000654852.2	1218	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCCAAGCGACATCATT	NA	False	NA	NA	False	AATAAA	-12	NA	75324741	75223317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75324564
transcript_90491.known	chr8	-	1513	2	FSM	ENSG00000249395.4	ENST00000670695.1	1513	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	-75278621	False	NA	-10	True	AATAAA	-20	NA	75278637	75223126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75278356
transcript_90492.known	chr8	-	1704	2	FSM	ENSG00000249395.4	ENST00000669950.1	1704	2	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	-75324366	True	NA	-10	True	AATAAA	-20	NA	75324692	75223126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75324220
transcript_90494.known	chr8	-	386	1	FSM	ENSG00000249395.4	ENST00000675539.1	386	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACGTTTGTGGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	75120798	75120412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75120400_75120800
transcript_90498.nnic	chr8	+	712	3	NNC	ENSG00000164749.13	novel	470	5	NA	NA	-37	-13548	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATCTTTGCATTTTTAT	75407595	True	NA	NA	False	AATAAA	-22	NA	75407876	75513586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_75407965_75490088_75490209_75513082
transcript_90499.nnic	chr8	-	1164	3	NNC	ENSG00000287352.1	novel	1177	3	NA	NA	-275	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	3.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTCACTTAATTCTT	-76308325	True	NA	NA	False	NA	NA	NA	76308590	76162118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_76163015_76306337_76306468_76308452
transcript_9050.nic	chr1	+	558	5	ISM	ENSG00000116191.19	ENST00000495034.5	1970	10	29	71708	-25	-71708	5prime_fragment	FALSE	canonical	3	94	junction_4	9.63068014212911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTCTGCACCAAATGC	178721478	True	NA	NA	False	AATAAA	-10	NA	178725193	178808080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044
transcript_90500.known	chr8	-	4169	4	FSM	ENSG00000164751.15	ENST00000357039.9	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	10.2306728354819	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTATTATTTTGATAG	-76997150	True	NA	NA	False	AATAAA	-23	NA	77000078	76980257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_76984196_76986186_76986297_76988306_76988339_76999989
transcript_90502.known	chr8	-	1627	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	90	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATTCTAAAGATAAAG	-77000255	False	NA	-51	True	AAAACA	-3	NA	77000267	76982956	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_76984196_76986186_76986297_76999989
transcript_90504.known	chr8	-	1470	3	FSM	ENSG00000164751.15	ENST00000520103.5	1470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGACTCTGGGATGAGT	NA	False	NA	-28	True	GATAAA	-5	NA	77000947	76982933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_76984196_76999989_77000133_77000882
transcript_90506.known	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	36.9173250505625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	78513256	True	NA	9	True	ATTAAA	-25	NA	78516339	78605267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
transcript_90508.known	chr8	+	1736	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	96.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	78513271	True	NA	-23	True	NA	NA	NA	78516354	78603185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78516469_78598357_78598536_78601741
transcript_9051.nic	chr1	+	2086	4	ISM	ENSG00000116191.19	ENST00000495034.5	1970	10	29	92617	-25	-92617	5prime_fragment	FALSE	canonical	3	102	junction_3	7.36357401145817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTTTATGCAAATT	178721478	True	NA	NA	False	NA	NA	NA	178725193	178787171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556
transcript_90512.nic	chr8	+	1198	10	NIC	ENSG00000104427.12	novel	3310	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	47.8147144044618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAGCCAA	78662902	True	NA	NA	False	AATAGA	-5	NA	78666054	78717502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78711989_78712107_78715220_78715329_78717327
transcript_90515.nnic	chr8	+	1154	10	NNC	ENSG00000104427.12	novel	3310	9	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	50.9923741575368	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAGCCAA	78662902	True	NA	NA	False	AATAGA	-5	NA	78666054	78717502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78714626_78714700_78715220_78715329_78717327
transcript_90516.nnic	chr8	+	1352	10	NNC	ENSG00000104427.12	novel	3310	9	NA	NA	-34	198	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	50.9923741575368	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTGTCATTCAAGGAAA	78662902	True	NA	5	True	AATAAA	-15	NA	78666054	78717700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78714626_78714700_78715220_78715329_78717327
transcript_90519.known	chr8	+	3310	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	25.8647322622911	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	78662936	True	NA	14	True	AATAAA	-18	NA	78666088	78719765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
transcript_9052.nic	chr1	+	1407	3	ISM	ENSG00000186283.14	ENST00000367627.8	2031	6	5767	0	2039	0	3prime_fragment	FALSE	canonical	3	292	junction_1	35	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179087488	True	NA	19	True	ATTAAA	-20	NA	179087836	179095996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_179088090_179094092_179094218_179094967
transcript_90523.nic	chr8	+	2285	8	NIC	ENSG00000104427.12	novel	3310	9	NA	NA	-34	-4026	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	39.5644656071014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTTCCTATTTAAAGT	78662902	True	NA	NA	False	NA	NA	NA	78666054	78713476	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78711989
transcript_90526.known	chr8	+	981	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTCCCATGTGCTTTA	78662936	True	NA	NA	False	NA	NA	NA	78666088	78679390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78666165_78675786_78675864_78678562
transcript_90527.known	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	79610856	True	NA	NA	False	AATAAA	-23	NA	79611116	79666158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_90528.known	chr8	-	2296	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.53325958665968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGTGGTGTATGTCT	-79767415	True	NA	NA	False	AATAAA	-15	NA	79767857	79764012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
transcript_90529.known	chr8	-	2197	5	FSM	ENSG00000164683.18	ENST00000354724.8	2197	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGTGTATGTCTTAC	-79767325	True	NA	NA	False	AATAAA	-18	NA	79767767	79764009	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79765772_79766650_79766733_79767008_79767093_79767218_79767295_79767574
transcript_9053.known	chr1	+	6840	16	FSM	ENSG00000057252.13	ENST00000367619.8	6840	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	10.0642381176564	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCTGATTCATT	179293382	True	NA	7	True	ATTAAA	-19	NA	179293796	179358680	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_90530.known	chr8	+	571	3	FSM	ENSG00000272138.3	ENST00000607754.3	618	3	0	47	0	-43	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGTGGATGTATTAT	79783595	True	NA	NA	False	ATTAAA	-14	NA	79783638	79802799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_79783767_79800560_79800691_79802486
transcript_90535.known	chr8	-	487	4	FSM	ENSG00000147586.10	ENST00000518271.1	487	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	276.529684964683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTGCGGCTATTAGATC	-80023676	False	NA	NA	False	NA	NA	NA	80030232	79919124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80028694_80028797_80030053
transcript_90537.known	chr8	-	411	4	FSM	ENSG00000147586.10	ENST00000520946.1	411	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	279.072670742865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCAGGAGAGTAAAGACT	-80023418	False	6556	NA	False	NA	NA	NA	80029974	79919031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003121_80028694_80028797_80029904
transcript_90545.known	chr8	-	555	3	FSM	ENSG00000147586.10	ENST00000519386.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-80023283	False	NA	NA	False	AATAAA	-23	NA	80029839	79918854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80029760
transcript_90546.known	chr8	-	403	3	FSM	ENSG00000147586.10	ENST00000519120.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	266.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATGAACTTTGCT	-80023408	False	6556	NA	False	AGTAAA	-29	NA	80029964	79918987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80029904
transcript_90547.nnic	chr8	-	884	3	NNC	ENSG00000147586.10	novel	838	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_2	239.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023734	False	NA	-4	True	AATAAA	-21	NA	80030290	79918716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_79919149_80002998_80003181_80030020
transcript_90548.known	chr8	-	838	3	FSM	ENSG00000147586.10	ENST00000276585.9	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	191	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023703	True	NA	-4	True	AATAAA	-21	NA	80030259	79918716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80030035
transcript_90549.nnic	chr8	-	851	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_2	234	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023734	False	NA	-4	True	AATAAA	-21	NA	80030290	79918716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_79919149_80002998_80003181_80030053
transcript_90556.nnic	chr8	-	746	3	NNC	ENSG00000147586.10	novel	555	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_2	239.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-80023734	False	NA	NA	False	AATAAA	-23	NA	80030290	79918854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_79919149_80002998_80003181_80030020
transcript_90558.nnic	chr8	-	713	3	NIC	ENSG00000147586.10	novel	555	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_2	234	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-80023734	False	NA	NA	False	AATAAA	-23	NA	80030290	79918854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_79919149_80002998_80003181_80030053
transcript_90560.known	chr8	-	437	2	FSM	ENSG00000147586.10	ENST00000521605.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGACTCCTTTGCTG	-80023733	True	NA	NA	False	AATAAA	-14	NA	80030289	79918965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80030035
transcript_90570.known	chr8	-	4041	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	389.694752338288	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-80162376	True	NA	1	True	AATACA	-23	NA	80171558	80034744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
transcript_90573.known	chr8	-	785	5	FSM	ENSG00000076554.16	ENST00000521354.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	470.048069350359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTTATAGTAAATGG	-80162374	True	NA	NA	False	NA	NA	NA	80171556	80037882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80171424
transcript_90575.known	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_2	232.626070956995	1260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	81274885	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
transcript_90578.known	chr8	-	1180	10	FSM	ENSG00000133731.10	ENST00000449740.6	1180	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	63.7926811855365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAATTCTCTTTGTCC	-81683929	True	NA	NA	False	NA	NA	NA	81686283	81659261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762_81685964_81686251
transcript_9058.known	chr1	-	8319	7	FSM	ENSG00000169905.13	ENST00000609928.6	8319	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	19.8466341954723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAGCGGACTGATT	-179871491	True	NA	-13	True	AATAAA	-14	NA	179877803	179839975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877238_179877374_179877692
transcript_90583.known	chr8	-	3369	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	15.352117117844	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTGTGTTCATTCTAT	-81683971	True	NA	NA	False	CATAAA	-44	NA	81686325	81656913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_90586.known	chr8	-	1106	8	FSM	ENSG00000133731.10	ENST00000311489.8	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	65.212681876695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAATTTTGACTTAG	-81683947	True	NA	NA	False	NA	NA	NA	81686301	81659043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81659467_81660515_81660668_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_90593.known	chr8	-	1006	9	FSM	ENSG00000104231.11	ENST00000519464.5	1006	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	146.102489711846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTTTTTGGTTTTAA	-81717125	True	NA	-26	True	TTTAAA	-15	NA	81721287	81702543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81708787_81708830_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_90598.known	chr8	-	2184	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	52.9146405418526	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	-81717138	True	NA	NA	False	AGTAAA	-23	NA	81721300	81701336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_90600.known	chr8	-	1778	8	FSM	ENSG00000104231.11	ENST00000523096.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	117.569085204906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-81717138	True	NA	-10	True	AATAAA	-14	NA	81721300	81701721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703104_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_90601.known	chr8	-	784	8	FSM	ENSG00000104231.11	ENST00000523431.5	784	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	161.849010008762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTAAAAATGTTGAAT	-81717128	True	NA	NA	False	AATATA	-30	NA	81721290	81702728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81708787_81708830_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_90617.known	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	95.9073627112237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	-81717127	True	NA	-53	True	NA	NA	NA	81721289	81701764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_90621.known	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	150.368436404276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	-81717133	True	NA	NA	False	NA	NA	NA	81721295	81702681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_90629.known	chr8	-	698	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	51.6346675101999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717126	True	NA	-3	True	AATAAA	-18	NA	81721288	81702913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_90631.known	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	99.7484836977485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717101	True	NA	-3	True	AATAAA	-18	NA	81721263	81702913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_90632.known	chr8	-	664	6	FSM	ENSG00000104231.11	ENST00000520604.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	150.840312914022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATAACAAATTTACAGC	-81732003	True	NA	-82	True	NA	NA	NA	81732345	81702992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732198
transcript_90633.known	chr8	+	1852	5	FSM	ENSG00000164695.5	ENST00000297265.5	1852	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	6.34428877022476	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCGTTATTATTTTT	81731523	True	NA	NA	False	AATAAA	-2	NA	81732447	81759515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_81732817_81753063_81753242_81755369_81755485_81758141_81758296_81758479
transcript_90635.known	chr8	-	582	5	FSM	ENSG00000104231.11	ENST00000519820.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	54.1387107345567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTATCTCTTTTG	-81717138	True	NA	NA	False	NA	NA	NA	81721300	81714598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_90636.known	chr8	-	885	7	FSM	ENSG00000104231.11	ENST00000521895.5	885	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	168.556287993721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTAGAGTTTTTTGGTT	-81717120	True	NA	-30	True	TTTAAA	-11	NA	81721282	81702547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702858_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_90638.known	chr8	-	3452	9	FSM	ENSG00000104497.15	ENST00000396330.6	3452	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	23.1729233158011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGTAGCTGTGTTGTT	-81841634	True	NA	-6	True	AATAAA	-14	NA	81842286	81799586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81840197_81840444_81842121
transcript_90639.known	chr8	-	3109	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	7.74069553379661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCTGTGTTGTTCATA	-81841533	True	NA	-2	True	AATAAA	-18	NA	81842185	81799582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
transcript_90643.known	chr8	-	3032	7	FSM	ENSG00000104497.15	ENST00000353788.8	3032	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	21.7517559955257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGTGTTGTTCATATG	-81841541	True	NA	0	True	AATAAA	-20	NA	81842193	81799580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81839611_81840083_81842121
transcript_90646.known	chr8	+	3726	19	FSM	ENSG00000133739.16	ENST00000360375.8	3726	19	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	22.1203916871981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	85105609	True	NA	7	True	ATTAAA	-24	NA	85107237	85146080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85107400_85109594_85109801_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
transcript_9065.nnic	chr1	-	573	3	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-7	2624	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-179871498	True	NA	-15	True	AATAAA	-18	NA	179877810	179862440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_179862827_179877304_179877374_179877692
transcript_90653.known	chr8	+	2385	15	FSM	ENSG00000133739.16	ENST00000517875.5	2385	15	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_5	16.1908263267462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATCACAGAAATAGAA	85105609	True	NA	17	True	AAAAAG	-25	NA	85107237	85138074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_90654.known	chr8	+	1964	8	FSM	ENSG00000133740.11	ENST00000416274.7	1964	8	0	0	0	0	multi-exon	FALSE	canonical	2	212	junction_6	80.7950291459436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	85175737	True	NA	12	True	AATAAA	-19	NA	85177153	85214518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212156_85212205_85213752
transcript_90655.known	chr8	+	1890	8	FSM	ENSG00000133740.11	ENST00000418930.6	1890	8	0	0	0	0	multi-exon	FALSE	canonical	2	194	junction_6	85.1816785896295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	85175808	False	NA	12	True	AATAAA	-19	NA	85177224	85214518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212159_85212205_85213752
transcript_90659.known	chr8	-	483	5	FSM	ENSG00000176731.12	ENST00000615697.4	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	554.178220430937	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATGCATCTAATTCT	-85201934	True	NA	-69	True	AATATA	-1	NA	85220353	85214555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219361_85220305
transcript_90660.known	chr8	-	475	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	615.085563153615	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-85201956	True	NA	-15	True	AATAAA	-18	NA	85220375	85214501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
transcript_90661.known	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_3	407.259404093045	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-85201955	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
transcript_90663.known	chr8	-	491	4	FSM	ENSG00000176731.12	ENST00000545322.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	331.078037125187	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-85202002	True	NA	-15	True	AATAAA	-18	NA	85220421	85214501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85217385_85217503_85219235_85219364_85220305
transcript_90665.known	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	272.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	-85201948	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85217385_85217503_85220305
transcript_90666.known	chr8	+	700	4	FSM	ENSG00000185015.8	ENST00000522631.1	700	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGTGACATAGGAGG	85220912	False	NA	NA	False	AATACA	-1	NA	85220926	85230336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85221126_85224954_85225296_85230084_85230201_85230292
transcript_90667.nic	chr8	+	874	2	ISM	ENSG00000185015.8	ENST00000522631.1	700	4	-441	5148	-101	-5148	5prime_fragment	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTCTGCCTTTAAA	85220173	True	NA	NA	False	AATAAA	-15	NA	85220485	85225188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_85221126_85224954
transcript_90668.known	chr8	+	1721	7	FSM	ENSG00000164879.7	ENST00000285381.3	1721	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_3	4.88762609953839	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	85438708	True	NA	6	True	AATAAA	-16	NA	85438858	85449040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85438944_85439711_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
transcript_90669.known	chr8	+	1562	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	10.1816828995342	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTTATTTATT	85463069	True	NA	17	True	AATAAA	-44	NA	85464006	85481493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
transcript_9067.nnic	chr1	-	1773	3	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-5	2624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-179871496	True	NA	-15	True	AATAAA	-18	NA	179877808	179862440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_179863730_179865486_179865855_179877692
transcript_90673.nic	chr8	-	1186	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	63.5032807551442	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	-86505032	True	NA	-10	True	AATAAA	-19	NA	86508781	86472348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_86472480_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_90675.known	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	30.4959013639538	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	-86504937	True	NA	-10	True	AATAAA	-19	NA	86508686	86472348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_9068.known	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	-179871487	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179865855_179877238_179877374_179877692
transcript_90681.known	chr8	-	1164	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	96.8336201946411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAGATCAAGCAAAG	-86504932	True	NA	72	True	NA	NA	NA	86508681	86474020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_90682.known	chr8	-	1106	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	77.4216337660218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCATGGCTCAGGCA	-86504926	True	NA	-19	True	AATAAA	-26	NA	86508675	86474111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_90686.known	chr8	+	4857	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	28.1790452952189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	86509981	True	NA	15	True	AATAAA	-20	NA	86514434	86561498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
transcript_90692.nic	chr8	+	945	10	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-12	14858	-12	1307	5prime_fragment	FALSE	canonical	3	187	junction_2	26.0061721069119	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAAGAATTCAGGTGTT	86509969	True	NA	NA	False	CATAAA	-27	NA	86514422	86546640	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594
transcript_90695.known	chr8	-	1750	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	0	249	0	-56	multi-exon	FALSE	canonical	3	12	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATCCTCCAAAATTTT	-89757678	True	NA	NA	False	NA	NA	NA	89757722	89724018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89724967_89725517_89725642_89757044
transcript_90698.known	chr8	+	2516	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	35.3723055510946	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	89756109	True	NA	10	True	AATAAA	-20	NA	89757815	89791064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_90703.known	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	49.3783578323765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	89756099	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_90708.known	chr8	+	4209	6	FSM	ENSG00000164823.11	ENST00000297438.6	4209	6	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	41.2485151247896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGTTCCACTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	89901858	89927868	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_9071.known	chr1	+	3044	11	FSM	ENSG00000143337.19	ENST00000271583.7	3044	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.9552374769783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTCAATTCGTAACAGT	179882090	True	NA	NA	False	AATGAA	-23	NA	179882296	179919277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179882978_179884691_179884770_179889309_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913585_179913631_179913997_179914055_179917451
transcript_90711.nic	chr8	+	858	5	ISM	ENSG00000164823.11	ENST00000297438.6	4209	6	133	6549	133	0	5prime_fragment	FALSE	canonical	3	40	junction_1	46.0943326234365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTTTTCATTTAGA	89901468	True	NA	NA	False	AATAAA	-28	NA	89901991	89921319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079
transcript_90712.known	chr8	-	4907	19	FSM	ENSG00000104320.14	ENST00000396252.6	4907	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	71.7438000074304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACTGTATTTAAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	90003228	89933335	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524_89984734_89984916_89984974_90003111
transcript_90714.known	chr8	-	4622	16	FSM	ENSG00000104320.14	ENST00000265433.8	4622	16	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_14	29.9053321146729	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTATTTAAGTCAAAAG	-89981999	True	NA	-6	True	AATAAA	-19	NA	89984667	89933330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_90717.known	chr8	+	1766	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	174.084856291645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	89996893	True	NA	NA	False	AATAAA	-13	NA	90001476	90051999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_9072.known	chr1	+	3397	10	FSM	ENSG00000143337.19	ENST00000435319.8	3397	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	15.9915100932254	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTATAAACTTAATGA	179882452	True	NA	13	True	AATAAA	-26	NA	179882695	179920077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
transcript_90732.known	chr8	+	2760	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	33.4490583749803	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCAACCTTTTTT	89996893	True	NA	NA	False	AATAAA	-16	NA	90001476	90053633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_90741.known	chr8	+	897	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.022112443709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	89996892	True	NA	NA	False	AATAGA	-34	NA	90001475	90051972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_90745.known	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_10	41.947586342959	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082869	False	NA	-1	True	AATAAA	-22	NA	90082879	90058607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
transcript_90746.nnic	chr8	-	2343	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	114.205122477059	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082869	False	NA	-1	True	AATAAA	-22	NA	90082879	90058607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_90748.nnic	chr8	-	1532	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	114.205122477059	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTCTGTGTAATCTCT	-90082869	False	NA	-55	True	NA	NA	NA	90082879	90059418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_9075.known	chr1	-	989	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATCCATTATTTTTA	-179882403	False	NA	NA	False	ATTAAA	-20	NA	179882595	179881606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179881600_179882600
transcript_90754.known	chr8	-	4992	3	FSM	ENSG00000180694.14	ENST00000458549.7	4992	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCGCTTTTCTTT	-90645271	True	NA	-6	True	AATAAA	-14	NA	90646083	90621999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90625863_90631551_90631708_90645110
transcript_90756.nic	chr8	+	2732	6	ISM	ENSG00000123119.12	ENST00000417640.7	5049	13	136328	1709	-12089	-163	3prime_fragment	FALSE	canonical	3	24	junction_5	4.53431361950185	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAAAG	90928002	True	NA	NA	False	NA	NA	NA	90928102	90957684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_90757.known	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	23.5762592452662	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-90983499	True	NA	-5	True	AATAAA	-20	NA	90985238	90958470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
transcript_90763.nnic	chr8	-	970	5	NIC	ENSG00000253250.3	novel	1041	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	117.41486277299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-90983502	True	NA	-5	True	AATAAA	-20	NA	90985241	90958470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_90959031_90960741_90960849_90971065_90971142_90980362_90980462_90985113
transcript_90764.nnic	chr8	-	804	5	NIC	ENSG00000253250.3	novel	1041	6	NA	NA	-3	-166	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	117.41486277299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTACATAATTGCTT	-90983502	True	NA	-8	True	TATAAA	-18	NA	90985241	90958636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_90959031_90960741_90960849_90971065_90971142_90980362_90980462_90985113
transcript_90765.known	chr8	-	841	8	FSM	ENSG00000155099.8	ENST00000518869.1	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	131.318432111585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTGCAAGGCGATTT	-91037241	True	NA	NA	False	NA	NA	NA	91040872	90995810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91024288_91024367_91040643
transcript_9077.known	chr1	-	1293	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	48.9122496238448	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTCTCAGCAATTC	-180500780	True	NA	-15	True	AATAAA	-22	NA	180502577	180288229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
transcript_90770.known	chr8	-	2759	7	FSM	ENSG00000155099.8	ENST00000285419.8	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	32.1804806262016	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATATACACTTGAATA	-91037228	True	NA	-5	True	AATAAA	-26	NA	91040859	90993801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_90777.known	chr8	-	867	6	FSM	ENSG00000155099.8	ENST00000518359.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.376741939629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTCCATTCTGGTTT	-91037180	True	NA	NA	False	TTTAAA	-12	NA	91040811	90995592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90995821_90996653_90996745_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_90779.known	chr8	-	4892	3	FSM	ENSG00000253738.3	ENST00000522817.3	4935	3	43	0	40	0	multi-exon	FALSE	canonical	3	39	junction_1	111.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTGACCACTGT	-91066771	True	NA	NA	False	AATAAA	-41	NA	91070149	91059317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91063747_91069578_91069823_91069930
transcript_90780.known	chr8	-	2377	3	FSM	ENSG00000253738.3	ENST00000657110.1	2377	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCTTGTTATTCCTCA	NA	False	NA	NA	False	AAAACA	-29	NA	91070583	91062909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91063747_91068935_91069823_91069930
transcript_90781.known	chr8	-	2171	2	FSM	ENSG00000253738.3	ENST00000524003.1	2171	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGACTATGACTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	91070189	91067910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91069823_91069930
transcript_90783.nnic	chr8	+	707	3	NNC	ENSG00000147606.9	novel	5094	18	NA	NA	-12128	-99102	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	1	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTTTTCCTGCTGTTT	91197064	True	NA	22	True	AATAAA	-19	NA	91197365	91219257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_91197525_91200612_91200793_91218889
transcript_90786.known	chr8	-	2370	11	FSM	ENSG00000079102.16	ENST00000360348.6	2370	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	9.00055553840984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGCATGAGCATT	-92095204	False	NA	NA	False	AAAAAG	-8	NA	92095215	91959786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027
transcript_90789.known	chr8	-	1882	6	FSM	ENSG00000205133.12	ENST00000517858.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	45.6403330399768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTCCTGCTAGCCAA	-92964246	True	NA	-14	True	AATAAA	-13	NA	92966087	92885348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_90790.known	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	30.8706980808663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-92964303	True	NA	-4	True	AATAAA	-18	NA	92966144	92883634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_90791.known	chr8	-	3667	5	FSM	ENSG00000205133.12	ENST00000521988.6	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	20.1912728672563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGGCATTTACCATT	-92964303	True	NA	-2	True	AATAAA	-22	NA	92966144	92883533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_90794.nic	chr8	-	1811	5	NIC	ENSG00000205133.12	novel	1882	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2833712591188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAATATCTAAGG	-92964304	True	NA	15	True	AATAAA	-42	NA	92966145	92885319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_92886668_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_90795.known	chr8	-	865	5	FSM	ENSG00000205133.12	ENST00000524037.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.0295490115664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCAAATCACATTCAG	-92964268	True	NA	NA	False	NA	NA	NA	92966109	92886232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_90799.known	chr8	-	1753	4	FSM	ENSG00000205133.12	ENST00000517540.5	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.9688792038494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTTCCTGCTAGCC	-92964288	True	NA	-16	True	AATAAA	-11	NA	92966129	92885350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92954405_92954565_92966006
transcript_90800.known	chr8	-	774	4	FSM	ENSG00000205133.12	ENST00000521617.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	44.4996878890428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCTCAAATCACATTC	-92964273	True	NA	NA	False	NA	NA	NA	92966114	92886234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92966006
transcript_90801.known	chr8	-	1630	4	FSM	ENSG00000205133.12	ENST00000523580.5	1630	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	40.8275506109403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAATATCTAAGG	-92964282	True	NA	15	True	AATAAA	-42	NA	92966123	92885319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92966006
transcript_90803.known	chr8	-	556	4	FSM	ENSG00000205133.12	ENST00000520384.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.3943268991366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACTTTTATATATCTTT	-92964233	True	NA	NA	False	NA	NA	NA	92966074	92886424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92954405_92954565_92966006
transcript_90808.known	chr8	+	1943	10	FSM	ENSG00000188343.14	ENST00000518116.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.882203613641	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTCAATCATGGCT	93697221	True	NA	11	True	AATAAA	-19	NA	93700613	93729250	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93724509_93724596_93726393_93726514_93728204
transcript_90812.known	chr8	+	1179	9	FSM	ENSG00000188343.14	ENST00000359421.9	1179	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	118.438802763284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCTTTAAAAAATATT	93697169	True	NA	NA	False	ATTAAA	-23	NA	93700561	93728446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93707201_93707282_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_90813.known	chr8	+	4198	9	FSM	ENSG00000188343.14	ENST00000518322.6	4198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	111.400179533069	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCATAGCAAGCAGGAT	93697157	True	NA	NA	False	NA	NA	NA	93700549	93731527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_9082.known	chr1	+	5844	6	FSM	ENSG00000121454.6	ENST00000263726.4	5844	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.81721582889959	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGTGTCTTGCTTTT	180229972	True	NA	10	True	AATAAA	-18	NA	180230263	180278984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180230606_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_90820.known	chr8	+	914	8	FSM	ENSG00000188343.14	ENST00000423990.6	914	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	132.402755998198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	93697189	True	NA	NA	False	ACTAAA	-41	NA	93700581	93728389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93726393_93726514_93728204
transcript_90827.known	chr8	+	1072	4	FSM	ENSG00000188343.14	ENST00000522324.5	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	15.6276108929747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGACTTTCTTAAACTA	93697157	True	NA	NA	False	NA	NA	NA	93700549	93705552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908
transcript_90828.known	chr8	+	4678	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	10.6909445932666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCGACTCCTTTGTTC	93754060	True	NA	83	True	CATAAA	-21	NA	93754893	93818121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_90830.known	chr8	+	2871	27	FSM	ENSG00000164953.17	ENST00000452276.6	2871	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	16.5065882489781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCTGAATAAATAACTTA	93754081	True	NA	NA	False	AAAACA	-28	NA	93754914	93816452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_90832.nic	chr8	+	1838	13	NIC	ENSG00000164953.17	novel	3019	25	NA	NA	2	3784	intron_retention	FALSE	canonical	0	0	junction_12	18.8561808316413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGGCTTCTAACTCGG	93754033	True	NA	NA	False	AATAAA	-15	NA	93754866	93786234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93785732
transcript_90833.known	chr8	+	1319	3	FSM	ENSG00000164953.17	ENST00000475305.1	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAATATCATTGTT	93754072	True	NA	NA	False	NA	NA	NA	93754905	93759480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93755777_93755867_93758482
transcript_90836.known	chr8	+	1249	2	FSM	ENSG00000164953.17	ENST00000684733.1	1249	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATATCATTGTTTACA	93754057	True	NA	NA	False	NA	NA	NA	93754890	93759484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93758482
transcript_90837.known	chr8	+	2554	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTATTTGTATTAA	93915141	True	NA	NA	False	AAGAAA	-9	NA	93916933	93924388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93917080_93917910_93917946_93922015
transcript_90839.known	chr8	+	4210	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	93915130	True	NA	11	True	ATTAAA	-22	NA	93916922	93926068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93917080_93922015
transcript_90841.known	chr8	-	2187	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.35410196624968	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-94261547	True	NA	NA	False	AATAAA	-23	NA	94262319	94249252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
transcript_90842.known	chr8	-	2103	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	4.49305018890286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-94261578	True	NA	NA	False	AATAAA	-23	NA	94262350	94249252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
transcript_90845.known	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	21.3875798403787	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	-94472004	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_90850.nic	chr8	-	1768	10	ISM	ENSG00000197275.14	ENST00000336148.10	3074	15	-26	19847	-26	0	5prime_fragment	FALSE	canonical	3	153	junction_5	26.131197947527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCCCACCTAAAATAGA	-94472030	True	NA	NA	False	AATAAA	-1	NA	94475141	94391806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_90851.known	chr8	-	1879	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	66.0454389038335	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATTCTTAAAGCATA	-94471951	True	NA	NA	False	AATAAA	-1	NA	94475062	94431159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
transcript_90855.known	chr8	-	5391	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	-94436229	True	NA	-4	True	AATACA	-16	NA	94436944	94427715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94432657_94436494
transcript_90856.nic	chr8	-	752	3	ISM	ENSG00000164944.12	ENST00000521080.5	6472	10	20611	0	914	0	3prime_fragment	TRUE	canonical	3	119	junction_2	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTATATATTTTCCCT	-94491829	False	15	-13	True	AATAAA	-20	NA	94491844	94488519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_94488861_94489938_94490083_94491577
transcript_9086.known	chr1	+	1489	3	FSM	ENSG00000236719.5	ENST00000442621.1	1489	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCCTTCTTTCATTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	180558975	180566518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180559056_180562203_180562345_180565250
transcript_90860.nnic	chr8	-	642	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-75	1	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACATTTTGCTGCCACC	-94639211	False	NA	-4	True	ATTAAA	-21	NA	94639542	94637283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr8_-_94637743_94639359
transcript_90861.nnic	chr8	-	305	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-18	-279	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTTTATATCCATGT	-94639154	False	331	NA	False	AATAAA	-26	NA	94639485	94637563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr8_-_94637743_94639359
transcript_90862.known	chr8	-	2183	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACATTTTGCTGCCAC	-94639136	False	331	-5	True	ATTAAA	-20	NA	94639467	94637284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94637300_94639500
transcript_90863.known	chr8	+	3756	16	FSM	ENSG00000104413.18	ENST00000358397.9	3756	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	154.416262816525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635827	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_90864.known	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_14	99.684702938816	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635827	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_90868.nic	chr8	+	2647	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-13	-73	combination_of_known_junctions	FALSE	canonical	3	85	junction_14	140.743361753054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGCCATGATGATATC	94635814	True	NA	24	True	AATAAA	-44	NA	94641160	94706442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94705924
transcript_9087.known	chr1	+	8484	15	FSM	ENSG00000143324.14	ENST00000367590.9	8484	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	14.6419860368066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGACTGTTTTT	180624409	True	NA	57	True	NA	NA	NA	180632021	180890279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180836521_180836717_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_90870.nic	chr8	+	2596	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-2	-72	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	129.697233775357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCCATGATGATATCT	94635825	True	NA	25	True	AATAAA	-45	NA	94641171	94706443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_90871.nic	chr8	+	3630	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	129.697233775357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635814	True	NA	20	True	AATAAA	-21	NA	94641160	94707466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_90873.known	chr8	+	3274	14	FSM	ENSG00000104413.18	ENST00000646773.1	3274	14	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_13	125.377347594934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAGAAAAAAAAAAAGGT	94635852	True	NA	13	True	NA	NA	NA	94641198	94707258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94705924
transcript_90876.nic	chr8	+	1547	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-79	38893	46	0	5prime_fragment	FALSE	canonical	3	494	junction_4	39.8723271096108	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGCATGAAAATAGTCT	94635773	True	NA	12	True	AATAAA	-22	NA	94641119	94668365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_90881.known	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	NA	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94705700_94707500
transcript_90882.known	chr8	+	3465	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	179.613523297883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635857	True	NA	20	True	AATAAA	-21	NA	94641203	94707466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
transcript_90883.known	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_7	21.8586932165627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	94717721	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_90891.nic	chr8	+	1384	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	41.479579982873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGCTGTCTCTTTATT	94717688	True	NA	27	True	AATACA	-17	NA	94719866	94744983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744342
transcript_90893.nic	chr8	+	1245	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	36.7786169759912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTCTCTTTATTCAT	94717688	True	NA	30	True	AATACA	-20	NA	94719866	94744986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
transcript_90894.nic	chr8	+	1343	7	NIC	ENSG00000156162.16	novel	1124	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	36.7786169759912	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGTGTTCTTAATGGT	94717688	True	NA	NA	False	ATTAAA	-21	NA	94719866	94745084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
transcript_90897.nic	chr8	+	1120	6	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	51.8767770779951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTCTCTTTATTCAT	94717688	True	NA	30	True	AATACA	-20	NA	94719866	94744986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94720015_94726330_94726442_94738368_94738460_94739412_94739535_94739644_94739791_94744484
transcript_909.known	chr1	+	1094	5	FSM	ENSG00000173614.14	ENST00000403197.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.11737237261468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGCAGTGGTCTCT	9942939	True	NA	NA	False	AATAAA	-17	NA	9943427	9981766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9981255
transcript_90906.known	chr8	+	1196	10	FSM	ENSG00000156170.13	ENST00000517976.5	1196	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	81.9145896650896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATTGATGTTAATTCT	95023396	True	NA	-2	True	ATTAAA	-9	NA	95025020	95057946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95036301_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_90909.known	chr8	+	1795	9	FSM	ENSG00000156170.13	ENST00000396124.9	1795	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.056502260989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTACATTCTGCGCTAT	95023364	True	NA	11	True	ATTAAA	-17	NA	95024988	95058710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_95025206_95031994_95032095_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_90910.known	chr8	+	946	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	52.0923158920776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	95023443	True	NA	-12	True	AAAACA	-6	NA	95025067	95057936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_90912.nic	chr8	+	2997	27	NIC	ENSG00000164941.14	novel	4645	27	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	68.6651251239232	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTACACAATTAGTGG	94815423	True	NA	13	True	AATAAA	-30	NA	94823242	94880314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94823302_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_90913.known	chr8	+	4645	27	FSM	ENSG00000164941.14	ENST00000523731.6	4645	27	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	35.528157846981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATGGGAAGAAATCAT	94815467	True	NA	NA	False	NA	NA	NA	94823286	94881746	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_90914.known	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	7.73742648398299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	-94894900	True	NA	NA	False	AATAAA	-32	NA	94895201	94880223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_90915.nic	chr8	-	1353	11	ISM	ENSG00000175305.18	ENST00000396133.7	1361	12	20	350	20	-350	5prime_fragment	FALSE	canonical	3	47	junction_10	8.11418511004032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATTTGTGAAGTGTCT	-94894933	True	NA	NA	False	AATAAA	-18	NA	94895234	94881963	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_90916.known	chr8	+	2901	2	FSM	ENSG00000175895.4	ENST00000315367.4	2901	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTCTGTATATT	95133726	True	NA	15	True	AATAAA	-18	NA	95133784	95156685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_95134031_95154030
transcript_90918.known	chr8	-	3340	6	FSM	ENSG00000156172.6	ENST00000286688.6	3340	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3.12409987036266	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATTTTGATGTT	-95268752	True	NA	2	True	AGTAAA	-24	NA	95269201	95244912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
transcript_9092.known	chr1	+	4126	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	44.2877893332199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	180624419	True	NA	NA	False	AATAAA	-19	NA	180632031	180886126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_90925.known	chr8	-	8459	4	FSM	ENSG00000156467.10	ENST00000287022.10	8459	4	0	0	0	0	multi-exon	FALSE	canonical	3	4838	junction_3	704.557702076668	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTCTGTGTCTGGC	-96196478	True	NA	NA	False	AATAAA	-16	NA	96235545	96222946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96235511
transcript_90926.known	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2880.65248685085	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	-96196472	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
transcript_90927.known	chr8	-	515	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3063.24414088506	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGTTTTTGAATTC	-96194152	False	39067	-45	True	AATAAA	-13	NA	96233219	96230938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
transcript_90933.known	chr8	-	1463	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_6	40.5276423681216	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAACCATTTGATAC	-96258295	True	NA	14	True	AATAAA	-36	NA	96261610	96239401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_9094.known	chr1	-	4810	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	0	0	0	multi-exon	FALSE	canonical	1	125	junction_6	100.147646105179	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	-181012011	True	NA	-9	True	AATAAA	-16	NA	181022870	180972724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
transcript_90940.nnic	chr8	-	1114	7	NIC	ENSG00000156469.9	novel	1463	8	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_6	166.191656429156	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTCGGGTCTCAACT	-96258312	True	NA	-8	True	AATAAA	-14	NA	96261627	96239423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96261500
transcript_90946.known	chr8	+	4990	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	24.4364254523629	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	96255002	True	NA	NA	False	NA	NA	NA	96261901	96336995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_90948.known	chr8	+	2366	11	FSM	ENSG00000156471.13	ENST00000337004.8	2366	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	90.4933146702009	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTGTAAAATGCTC	96255013	True	NA	25	True	AATAAA	-27	NA	96261912	96334552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96262220_96273298_96273391_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_90949.known	chr8	+	3307	5	FSM	ENSG00000169439.12	ENST00000302190.9	3307	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_2	34.0807863759039	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTCTTCAACTGTA	96488150	True	NA	27	True	AATAAA	-40	NA	96493812	96611790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96494332_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_90951.known	chr8	+	677	5	FSM	ENSG00000169439.12	ENST00000522911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	178.665189670512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCCATTCTGGCACT	96493992	False	NA	NA	False	AATAAA	-44	NA	96494007	96609643	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96494044_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_90958.known	chr8	+	1932	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	2.6954231805876	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTCATTTATG	96645133	True	NA	7	True	AATAAA	-19	NA	96645241	97143501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
transcript_90959.known	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	25.8680695992838	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	97641428	True	NA	6	True	AATAAA	-23	NA	97644183	97730260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_90962.known	chr8	+	2442	7	FSM	ENSG00000104341.17	ENST00000521545.7	2442	7	0	0	0	0	multi-exon	TRUE	canonical	3	4039	junction_4	213.878794855612	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGACCAGGTC	97753459	True	NA	NA	False	AAAAAG	-44	NA	97775787	97853013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97776109_97805352_97805465_97815327_97815402_97816057_97816181_97819139_97819239_97825057_97825154_97851396
transcript_90964.known	chr8	+	3554	19	FSM	ENSG00000132561.14	ENST00000521689.5	3554	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	11.8359412879939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACACAACTTGCTTCTG	NA	False	NA	NA	False	AATATA	-3	NA	97868839	98035978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033098_98033177_98033560_98033660_98035656
transcript_90966.known	chr8	+	2031	8	FSM	ENSG00000132561.14	ENST00000523490.1	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	12.162169516453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	97868148	True	NA	NA	False	NA	NA	NA	97869112	98004286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660
transcript_90970.known	chr8	-	1129	5	FSM	ENSG00000156482.11	ENST00000521726.1	1129	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2896.32961694625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACCTTTTCACCTAC	NA	False	NA	-104	True	NA	NA	NA	98046469	98041806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045714
transcript_90972.known	chr8	-	498	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_4	1136.98779676829	6915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980496	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
transcript_90973.known	chr8	-	440	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	2517.76716556555	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980495	True	NA	-18	True	AATAAA	-19	NA	98045544	98041720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
transcript_90974.known	chr8	-	575	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	6222	junction_1	334.068189978566	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980465	True	NA	-18	True	AATAAA	-19	NA	98045514	98041720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
transcript_90975.known	chr8	-	614	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2638.42750279404	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980496	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
transcript_90976.known	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	98064357	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98064728_98089075_98090030_98093220
transcript_90977.known	chr8	+	596	2	FSM	ENSG00000177459.11	ENST00000545282.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGGTGACTTTCTT	98064311	True	NA	8	True	AATAAA	-20	NA	98064521	98093610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98064728_98093220
transcript_90978.known	chr8	-	884	6	FSM	ENSG00000132541.11	ENST00000522791.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	248.887926585441	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTTATATAGATAATA	-98113625	True	NA	-64	True	ATTAAA	-38	NA	98117159	98102396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108714_98117031
transcript_90979.known	chr8	-	987	6	FSM	ENSG00000132541.11	ENST00000254878.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	594	junction_3	30.7441051260238	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGATTTTGTTCAC	-98113637	True	NA	-11	True	AATAAA	-15	NA	98117171	98102343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108752_98117031
transcript_90980.known	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	254.843481376315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	-98113576	True	NA	-106	True	AGTAAA	-2	NA	98117110	98102438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
transcript_90981.known	chr8	-	761	5	FSM	ENSG00000132541.11	ENST00000521560.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	262.328991916639	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCTTTTACTTGAG	-98113637	True	NA	NA	False	TTTAAA	-39	NA	98117171	98102463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98117031
transcript_90983.known	chr8	+	4739	16	FSM	ENSG00000104356.11	ENST00000401707.7	4739	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	6.23395718803251	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGTTGTGAATATTTA	98115973	True	NA	10	True	AATAAA	-17	NA	98117292	98159835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_90984.known	chr8	-	2833	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	19.1373979422491	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCGTTTCTGTATCTTT	-98823778	True	NA	-2	True	AATAAA	-21	NA	98825688	98454632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_90987.known	chr8	-	2485	9	FSM	ENSG00000104375.17	ENST00000617590.1	2485	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.4745808117018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTTCTGTATCTTTGT	-98823761	True	NA	0	True	AATAAA	-23	NA	98825671	98454630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_90988.nic	chr8	-	1416	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	124745	-34	292	5prime_fragment	FALSE	canonical	3	113	junction_1	15.0658418894111	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGTGTCATATCT	-98823812	True	NA	-1	True	AATAAA	-17	NA	98825722	98579377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_90989.nic	chr8	-	1278	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	124883	-34	154	5prime_fragment	FALSE	canonical	3	113	junction_1	15.0658418894111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGCTATCTTTTTCT	-98823812	True	NA	NA	False	AATATA	-15	NA	98825722	98579515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_9099.known	chr1	-	7554	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	0	0	0	multi-exon	FALSE	canonical	3	1285	junction_2	108.651839479239	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTGTGACTCTGTT	-182385778	True	NA	NA	False	AATAAA	-14	NA	182391790	182378097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
transcript_90994.known	chr8	+	1838	4	FSM	ENSG00000164920.10	ENST00000297565.9	1834	4	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGTGTCTTGCTATT	98944396	True	NA	NA	False	AATAAA	-28	NA	98944441	98952104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98944824_98948838_98949609_98950655_98950756_98951518
transcript_90995.known	chr8	+	14011	62	FSM	ENSG00000132549.20	ENST00000357162.7	14011	62	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_48	5.01258829216244	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATAAGTGTCATTT	99011082	True	NA	NA	False	AATAAA	-17	NA	99013273	99877580	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507136_99507204_99511103_99511513_99520898_99521011_99556449_99556654_99575657_99575785_99577489_99577634_99641810_99642499_99661353_99661492_99699524_99699933_99717170_99717374_99720344_99720553_99720862_99721048_99766773_99766971_99776774_99776957_99778681_99779032_99784314_99784477_99809374_99809531_99817539_99817804_99818450_99818535_99818712_99818889_99819411_99819583_99819920_99820123_99821293_99821483_99823831_99823979_99832368_99832653_99835196_99835325_99835538_99835739_99848775_99848895_99853450_99854257_99859303_99859481_99861775_99861947_99868288_99868466_99870784_99870888_99871447_99871698_99875417
transcript_90997.known	chr8	-	380	2	FSM	ENSG00000253948.3	ENST00000521696.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTTTTAATTTCTAA	-99013033	False	NA	-5	True	AATAAA	-19	NA	99013044	98996762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98996967_99012868
transcript_90998.known	chr8	-	694	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_3	2077.52967621537	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGACAGTAAGTCTT	-99858344	True	NA	-16	True	AATAAA	-12	NA	99893623	99878150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
transcript_90999.known	chr8	-	571	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_3	2027.37800016562	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858343	True	NA	-14	True	AATAAA	-14	NA	99893622	99878148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
transcript_91.known	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_10792_10882_11243_11403
transcript_91000.known	chr8	-	429	4	FSM	ENSG00000164919.11	ENST00000517682.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	2114.56635953779	4284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858402	True	NA	-14	True	AATAAA	-14	NA	99893681	99878148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
transcript_91004.known	chr8	-	724	4	FSM	ENSG00000164919.11	ENST00000518171.5	724	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2096.09006379868	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATTTGTATGTTATCT	-99858418	True	NA	NA	False	NA	NA	NA	99893697	99885991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99886383_99887489_99887619_99891907_99892053_99893638
transcript_91009.known	chr8	-	745	3	FSM	ENSG00000164919.11	ENST00000523016.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	3495	junction_2	757.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTAAGATATTTTAAAC	-99858401	True	NA	NA	False	ATTAAA	-9	NA	99893680	99887060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99887619_99891907_99892053_99893638
transcript_91010.known	chr8	+	947	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2053	junction_3	222.549370302911	1298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	100134703	True	NA	15	True	AATAAA	-16	NA	100150635	100154003	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
transcript_91021.known	chr8	-	4186	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	12.4225998749988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTTCTGGTGTGTA	-100309425	True	NA	-11	True	AATAAA	-17	NA	100309953	100257066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
transcript_91022.nic	chr8	-	524	2	ISM	ENSG00000034677.13	ENST00000341084.7	4186	10	-157	30921	38	-81	5prime_fragment	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTTCAATAGGCTCC	-100310096	False	NA	NA	False	AAAAAG	-14	NA	100310110	100287987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_100288268_100309866
transcript_91023.known	chr8	-	2779	6	FSM	ENSG00000186106.11	ENST00000519597.5	2779	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	52.1167919196875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-100557604	True	NA	-5	True	AATAAA	-21	NA	100559784	100520771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100532355_100532461_100533208_100533312_100559710
transcript_91025.known	chr8	-	2649	5	FSM	ENSG00000186106.11	ENST00000335659.7	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	21.7987958383026	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-100557579	True	NA	-5	True	AATAAA	-21	NA	100559759	100520771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559710
transcript_91027.known	chr8	-	661	4	FSM	ENSG00000186106.11	ENST00000358990.3	661	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	57.8638248150105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGATCTTCGTCAT	-100557579	True	NA	NA	False	NA	NA	NA	100559759	100522656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100559710
transcript_9103.known	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	19.536824204563	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	-182603063	True	NA	-1	True	AATAAA	-19	NA	182604389	182598622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
transcript_91040.known	chr8	-	2401	16	FSM	ENSG00000070756.17	ENST00000519004.5	2401	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	2054.1988370706	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAAGAATTTTCAGCA	-100666146	True	NA	-52	True	AGTAAA	-33	NA	100722087	100703098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721453_100721728
transcript_9105.known	chr1	+	2543	13	FSM	ENSG00000135838.14	ENST00000367553.6	2543	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	8.42450130406674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	182789062	True	NA	NA	False	AATAAA	-19	NA	182789772	182830384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_91057.known	chr8	-	2861	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_10	762.957350293807	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	-100666147	True	NA	-6	True	AATAAA	-17	NA	100722088	100702915	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_91075.known	chr8	-	3395	14	FSM	ENSG00000070756.17	ENST00000678709.1	3395	14	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_10	750.761506895956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	-100721423	False	NA	NA	False	NA	NA	NA	100721559	100702050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100718281_100721390
transcript_91080.known	chr8	-	2207	14	FSM	ENSG00000070756.17	ENST00000519100.6	2207	14	0	0	0	0	multi-exon	FALSE	canonical	2	149	junction_5	2141.03053492455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCAGTTCTGTTTTAA	-100721509	False	NA	31	True	NA	NA	NA	100721645	100703015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_91081.known	chr8	-	3116	14	FSM	ENSG00000070756.17	ENST00000523555.6	3116	14	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_9	789.861766049893	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGACTTTCAGGTGGT	-100722451	False	NA	-7	True	ATTAAA	-35	NA	100722587	100704096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_91097.known	chr8	-	487	5	FSM	ENSG00000070756.17	ENST00000517990.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	2	250	junction_3	3685.04090886384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAAAAAAACATTGCAA	-100706127	False	114	2	True	AAGAAA	-31	NA	100706779	100703284	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705030_100705588_100705674_100706650
transcript_911.known	chr1	+	3734	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.12310562561766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTCTGATGGA	9942986	True	NA	NA	False	AATAAA	-14	NA	9943474	9985498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
transcript_91102.known	chr8	-	5248	7	FSM	ENSG00000164924.18	ENST00000395957.6	5248	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	1595.5428543289	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCTGTTCTGTGTGTT	-100952973	False	7530	NA	False	NA	NA	NA	100952983	100916524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928_100952126_100952849
transcript_91105.known	chr8	-	964	6	FSM	ENSG00000164924.18	ENST00000395951.7	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	1672.70958627013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCCACAAATAGTTTT	-100950547	False	1354	82	True	NA	NA	NA	100950557	100920629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100950405
transcript_91106.known	chr8	-	2974	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	1635.58031291649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	-100951439	False	NA	-13	True	NA	NA	NA	100951449	100918682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
transcript_91107.known	chr8	-	994	6	FSM	ENSG00000164924.18	ENST00000395953.6	994	6	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	1649.15408619086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACTTCTATTTGAAT	-100951584	False	NA	NA	False	NA	NA	NA	100951594	100920586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951455
transcript_91108.known	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_5	1522.61677384692	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-100952983	False	7530	-36	True	AATAAA	-11	NA	100952993	100918578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
transcript_91109.known	chr8	-	2829	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_5	1651.15026572387	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTTTTGTTGCTTG	-100953331	False	NA	13	True	NA	NA	NA	100953341	100918685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
transcript_91120.known	chr8	-	1399	5	FSM	ENSG00000164924.18	ENST00000521309.5	1399	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1930.72050993923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAATAACTTGAGATGAT	-100902511	True	NA	54	True	NA	NA	NA	100952019	100919828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100951928
transcript_91127.known	chr8	-	959	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	776.360418877727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACAGGATAAATGGTT	-101205719	False	NA	NA	False	AATAAA	-19	NA	101205732	101198938	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
transcript_91132.known	chr8	-	2672	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1612	junction_2	39.5979797464467	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTAGTCTAATTTCTT	-101191740	True	NA	NA	False	ATTAAA	-18	NA	101205673	101197051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
transcript_91134.known	chr8	-	785	3	FSM	ENSG00000120963.12	ENST00000519744.5	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	788.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATCTGCTGCCTTAG	-101191635	True	NA	NA	False	NA	NA	NA	101205568	101198725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_101199240_101201606_101201744_101205434
transcript_91136.nnic	chr8	-	2617	10	NNC	ENSG00000048392.13	novel	4774	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_1	159.64126450681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-102235096	True	NA	-4	True	AATAAA	-18	NA	102238939	102204501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_102205960_102208094_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_91137.nnic	chr8	-	2569	10	NNC	ENSG00000048392.13	novel	4774	9	NA	NA	-10	-80	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_1	159.64126450681	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTACATTTCCTTT	-102238943	False	NA	-9	True	AATAAA	-15	NA	102238971	102204581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_102205960_102208094_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_91139.known	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	187.933332594301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-102238747	False	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
transcript_9114.known	chr1	+	3027	11	FSM	ENSG00000135838.14	ENST00000367554.7	3027	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	16.1740532953246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	182789448	182830384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182789806_182803697_182803772_182806144_182806532_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_91140.known	chr8	-	4774	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	34.6112337254828	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-102235118	True	NA	-4	True	AATAAA	-18	NA	102238961	102204501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_91153.known	chr8	+	2376	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	8	0	8	0	multi-exon	FALSE	canonical	1	5	junction_2	16	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	102238877	True	NA	NA	False	NA	NA	NA	102239393	102253750	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102239701_102244004_102244122_102251798
transcript_91155.known	chr8	-	2915	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	15.5777619273972	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-102651967	True	NA	-5	True	AATAAA	-16	NA	102655725	102648783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
transcript_91161.nnic	chr8	+	1217	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-163	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	12.4599357943771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	102929968	True	NA	11	True	ATTAAA	-20	NA	102930018	102977876	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_102930519_102937623_102937758_102941538_102941699_102941920_102942054_102977586
transcript_91166.known	chr8	+	756	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.328828005938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAGTATATGAAATC	102929944	True	NA	NA	False	NA	NA	NA	102930181	102977738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
transcript_91168.nnic	chr8	+	750	3	NNC	ENSG00000253320.7	novel	756	4	NA	NA	2	1225	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	10.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGCCTCTTGTCAGT	102929946	True	NA	NA	False	AATACA	-21	NA	102930183	102938943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_102930519_102937623_102937758_102938662
transcript_91169.known	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	102863881	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102864624_102865102
transcript_91171.known	chr8	-	4316	13	FSM	ENSG00000155096.15	ENST00000683787.1	4316	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	606.555318307132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTATTCCTCATGTTT	-102864159	False	NA	-22	True	GATAAA	-1	NA	102864192	102826371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849986_102850145_102858012_102858151_102863806
transcript_91172.known	chr8	-	2857	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	0	0	0	0	multi-exon	FALSE	canonical	1	457	junction_10	442.215280340545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTCATTA	-102864160	False	NA	-4	True	AGTAAA	-17	NA	102864193	102827822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
transcript_9118.known	chr1	+	1536	11	FSM	ENSG00000135838.14	ENST00000367555.5	1536	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.48757107642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	182789058	True	NA	NA	False	AATAAA	-19	NA	182789768	182830384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182825780_182825821_182829602
transcript_91180.known	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	1	642	junction_2	295.241797529185	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	-102832217	True	NA	-11	True	AATAGA	-20	NA	102864163	102826307	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_9119.known	chr1	+	4493	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	0	0	0	0	multi-exon	TRUE	canonical	3	773	junction_11	101.215832352418	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	182825464	True	NA	7	True	AATAAA	-21	NA	182839346	182887982	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_91191.known	chr8	+	5635	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	27.2930343168769	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	103014918	True	NA	14	True	AATAAA	-16	NA	103021082	103073051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_91194.known	chr8	+	5612	13	FSM	ENSG00000155097.12	ENST00000395862.7	5612	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	96.6181990563315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	103014898	True	NA	14	True	AATAAA	-16	NA	103021062	103073051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103021183_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_9120.known	chr1	+	7929	28	FSM	ENSG00000135862.6	ENST00000258341.5	7929	28	0	0	0	0	multi-exon	TRUE	canonical	3	464	junction_2	77.236529450005	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGGCCTGAGTG	183014843	True	NA	30	True	AATAAA	-24	NA	183023419	183145592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668_183137828_183140403_183140504_183142533
transcript_91200.known	chr8	+	2774	8	FSM	ENSG00000164930.12	ENST00000523739.5	2774	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	22.7138364735449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCTTTTACACTGAATT	103297430	True	NA	NA	False	NA	NA	NA	103298864	103331994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103298996_103299955_103300085_103300199_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_91201.known	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.3834675443528	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103297463	True	NA	16	True	AATAAA	-19	NA	103298897	103332866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_91203.known	chr8	+	3646	6	FSM	ENSG00000164930.12	ENST00000522484.5	3646	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	25.1507455157894	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103298819	False	NA	16	True	AATAAA	-19	NA	103298830	103332866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103329654_103330066_103331340
transcript_91204.known	chr8	+	1240	4	FSM	ENSG00000164932.13	ENST00000330295.10	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAATATCTTTAAATTAA	103371144	True	NA	NA	False	AATAAA	-16	NA	103371537	103382989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103371807_103375737_103375960_103378026_103378244_103382457
transcript_9121.nnic	chr1	-	1361	11	NNC	ENSG00000157064.11	novel	1573	5	NA	NA	-129	3669	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.13290753265355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTTTGTAAGTTTAAAT	-183418481	True	NA	NA	False	AATAAA	-17	NA	183418509	183244567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_183244866_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
transcript_91210.known	chr8	+	1970	11	FSM	ENSG00000164934.14	ENST00000612750.5	1970	11	0	0	0	0	multi-exon	FALSE	canonical	2	1353	junction_2	226.809699968939	2647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTATTTTTGGTAA	103405890	True	NA	12	True	ATTAAA	-21	NA	103415385	103443453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103427253_103430611_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_9123.known	chr1	-	5441	11	FSM	ENSG00000157064.11	ENST00000287713.7	5441	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	3.95474398665704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTCTTGGTCAAGA	-183417362	True	NA	1	True	AATAAA	-19	NA	183418380	183248236	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_183252744_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
transcript_91230.known	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	23.5065002830186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	-103412004	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
transcript_91234.known	chr8	-	1347	6	FSM	ENSG00000164933.12	ENST00000523866.1	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	53.0056600751278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGCTTTAAAATTAACC	-103411966	True	NA	NA	False	NA	NA	NA	103415069	103400057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103407633_103407785_103414783
transcript_91237.known	chr8	+	1062	6	FSM	ENSG00000176406.23	ENST00000523362.5	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.12795348811006	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCAACCTTGGCCCCTCT	104223278	True	NA	NA	False	NA	NA	NA	104223363	104251736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
transcript_91240.nnic	chr8	-	543	3	NNC	ENSG00000147647.13	novel	589	5	NA	NA	50644	1003	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACTGATGAGAGGGC	NA	False	NA	NA	False	AATAAA	-43	NA	104330767	104329320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_104329496_104330177_104330438_104330659
transcript_91241.known	chr8	+	2621	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	39.8878427594173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106726011	106752679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_91245.known	chr8	+	1148	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106270266	True	NA	15	True	AATAAA	-17	NA	106270289	106272774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_106270368_106271704
transcript_91246.nnic	chr8	+	876	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106270216	True	NA	15	True	AATAAA	-17	NA	106270308	106272774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_106270368_106271957
transcript_91248.known	chr8	+	1174	2	FSM	ENSG00000164830.19	ENST00000661818.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTATTGTTTTGTTT	106270267	True	NA	NA	False	AATAAA	-17	NA	106270290	106272902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_106270368_106271805
transcript_9125.known	chr1	+	4642	23	FSM	ENSG00000116698.22	ENST00000507469.5	4642	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	74.839166393315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCTGTGTATCGATTC	183466156	True	NA	9	True	ATTAAA	-16	NA	183472502	183554188	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183552976
transcript_91253.known	chr8	-	1609	14	FSM	ENSG00000104408.11	ENST00000676642.1	1609	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	1607.08969567378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTACGTATAAATTT	-108209452	True	NA	-79	True	AATAAA	-36	NA	108248716	108201793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235098_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_91256.known	chr8	-	1501	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	0	0	0	multi-exon	FALSE	canonical	2	45	junction_1	1087.26798291252	2290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209466	True	NA	-28	True	AATAAA	-15	NA	108248730	108201742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91257.known	chr8	-	1275	13	FSM	ENSG00000104408.11	ENST00000677272.1	1275	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	1089.90140672856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAGATGAAAAAAA	-108209455	True	NA	NA	False	NA	NA	NA	108248719	108201877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241885_108241914_108248612
transcript_91258.known	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1089.63097728849	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-108209454	True	NA	-62	True	TATAAA	-40	NA	108248718	108201776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
transcript_9126.known	chr1	+	5788	22	FSM	ENSG00000116698.22	ENST00000347615.6	5788	22	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_14	50.0002721081031	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	183466155	True	NA	7	True	ATTAAA	-14	NA	183472501	183554186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_91260.known	chr8	-	2107	13	FSM	ENSG00000104408.11	ENST00000676892.1	2107	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1091.12224019839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209511	True	NA	NA	False	NA	NA	NA	108248775	108201215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203145_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91264.known	chr8	-	1394	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	1126.36626311235	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-108209469	True	NA	-30	True	AATAAA	-13	NA	108248733	108201744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_91266.known	chr8	-	2307	12	FSM	ENSG00000104408.11	ENST00000523674.2	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_5	231.211469874773	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209455	True	NA	NA	False	NA	NA	NA	108248719	108201215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91267.known	chr8	-	2485	12	FSM	ENSG00000104408.11	ENST00000678901.1	2485	12	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_5	237.96499499501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTACATTTTGGAAACA	-108209454	True	NA	-98	True	AATAAA	-17	NA	108248718	108201812	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91268.known	chr8	-	1158	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	1255.16619331446	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209455	True	NA	-28	True	AATAAA	-15	NA	108248719	108201742	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91271.known	chr8	-	1121	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	1223.03213750702	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-108209462	True	NA	-30	True	AATAAA	-13	NA	108248726	108201744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
transcript_91274.known	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	1571.52290470104	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	-108209466	True	NA	1	True	ATTAAA	-19	NA	108248730	108230121	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91275.known	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1363.4735314651	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209452	True	NA	-25	True	AATAAA	-18	NA	108248716	108201739	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
transcript_9128.known	chr1	-	7266	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	376.263501049759	867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGAGTTTATTAATC	-183630965	True	NA	NA	False	AATAAA	-20	NA	183635783	183620845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
transcript_91281.known	chr8	+	3527	11	FSM	ENSG00000104412.8	ENST00000220853.8	3527	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	36.2403090494549	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTCCTGTTACTT	108437445	True	NA	17	True	AATAAA	-21	NA	108443623	108489196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872_108455931_108469825_108469912_108470061_108470122_108475881_108475964_108476781_108476893_108479005_108479111_108486511
transcript_91289.known	chr8	+	532	5	FSM	ENSG00000104412.8	ENST00000517593.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	21.5450110234365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGATGGGCCACAGTT	108437454	True	NA	NA	False	ATTAAA	-28	NA	108443632	108456073	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872
transcript_91291.known	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-108786785	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108785138_108787475
transcript_91299.known	chr8	-	3811	10	FSM	ENSG00000120526.12	ENST00000678094.1	3811	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	168.719652049352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATAGTACCTTGTATT	-109324238	True	NA	-109	True	NA	NA	NA	109334121	109241020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_109243302_109245321_109245442_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_91302.known	chr8	-	3919	10	FSM	ENSG00000120526.12	ENST00000239690.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	42.1841934003663	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAGTCATTAACAAT	-109324204	True	NA	-7	True	AATAAA	-23	NA	109334087	109240918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_91309.known	chr8	-	2542	9	FSM	ENSG00000120526.12	ENST00000676569.1	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_5	26.1698180161804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTATAGGGGAATTCTA	-109324238	True	NA	NA	False	NA	NA	NA	109334121	109244349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_9131.known	chr1	+	1632	6	FSM	ENSG00000198860.14	ENST00000462677.3	1632	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	200.741226458344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGCTTTGTTCCAG	184048531	True	NA	NA	False	CATAAA	-6	NA	184051755	184073846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184070615_184070733_184072156_184072299_184072826
transcript_91314.known	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1442.82890531067	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	109310458	True	NA	-19	True	NA	NA	NA	109334323	109343624	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_91315.known	chr8	+	546	5	FSM	ENSG00000120533.13	ENST00000339942.11	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1627.19027390776	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTGGATTTTGAAA	109310473	True	NA	27	True	AATAAA	-21	NA	109334338	109343670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334403_109336132_109336205_109339319_109339391_109340490_109340564_109343404
transcript_91316.known	chr8	+	2966	5	FSM	ENSG00000120533.13	ENST00000517311.5	2966	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1269.94830111308	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGACTCACATGATTGA	109310460	True	NA	12	True	AATAAA	-15	NA	109334325	109345953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_91317.known	chr8	+	1540	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	1285.7204935366	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	109310485	True	NA	NA	False	NA	NA	NA	109334350	109344599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
transcript_9132.known	chr1	+	1834	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	168.674798058275	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048474	True	NA	17	True	AATAAA	-19	NA	184051698	184074212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
transcript_91322.known	chr8	+	541	4	FSM	ENSG00000120533.13	ENST00000522407.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1640.18677798191	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTGGATTTTGAAAT	109310481	True	NA	28	True	AATAAA	-22	NA	109334346	109343671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334475_109339319_109339391_109340488_109340564_109343404
transcript_91324.known	chr8	+	19969	78	FSM	ENSG00000205038.12	ENST00000378402.10	19969	78	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	0.61025143503744	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAACAGCAGGTCTAAA	109362444	True	NA	NA	False	AATAAA	-18	NA	109362460	109537207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109362654_109364546_109364637_109381369_109381515_109382462_109382572_109384069_109384128_109385536_109385631_109388496_109388551_109389078_109389153_109390451_109390495_109394414_109394486_109396026_109396138_109398458_109398549_109400075_109400345_109401496_109401589_109404553_109404714_109404994_109405131_109406334_109406479_109408048_109408207_109409864_109409979_109412264_109412415_109413420_109413546_109419096_109419261_109420517_109420691_109425084_109425233_109427001_109427157_109429339_109429463_109429931_109430038_109433105_109433217_109435189_109435355_109436337_109436460_109438323_109438457_109438896_109439093_109440709_109440853_109441274_109441380_109442006_109442196_109442945_109443117_109443675_109443903_109444660_109445646_109448142_109448392_109449337_109449488_109450974_109451150_109452123_109452281_109452717_109452875_109454166_109454247_109454722_109454853_109456261_109456392_109459594_109459837_109461771_109461909_109464215_109465246_109466577_109466770_109475117_109475270_109476507_109476668_109477224_109477397_109479550_109479640_109479990_109480140_109481432_109481563_109482986_109483106_109485043_109485174_109486647_109486822_109489951_109490056_109490971_109491102_109491872_109491995_109493660_109493752_109496918_109497068_109497149_109497273_109498461_109498574_109498654_109498772_109504326_109504493_109507662_109507896_109508096_109508265_109510776_109510935_109515169_109515306_109518166_109518509_109522185_109522338_109522743_109522891_109523232_109523387_109526783_109527021_109530079
transcript_91325.known	chr8	+	1467	7	FSM	ENSG00000147654.15	ENST00000395785.6	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	39.1648935768871	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTGTACATCATTA	109539253	True	NA	NA	False	ATTAAA	-22	NA	109539710	109565160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_91329.known	chr8	+	2383	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	51.9575146955023	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCTCAAAGTTTTAATA	109539177	False	NA	NA	False	AATAAA	-19	NA	109540172	109565996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_9134.known	chr1	+	1907	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	111.777401562212	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048505	True	NA	17	True	AATAAA	-19	NA	184051729	184074212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
transcript_91347.known	chr8	+	836	3	FSM	ENSG00000254339.6	ENST00000523682.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	238	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAGTATTTCAAA	114265208	True	NA	NA	False	NA	NA	NA	114282068	114295813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284252_114284515_114295465
transcript_91351.known	chr8	+	877	3	FSM	ENSG00000254339.6	ENST00000520543.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	228.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAATATTGATTAT	114265212	True	NA	NA	False	NA	NA	NA	114282072	114295839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284252_114284534_114295465
transcript_91353.nnic	chr8	+	1074	3	NIC	ENSG00000254339.6	novel	925	3	NA	NA	-143	0	combination_of_known_junctions	FALSE	canonical	3	333	junction_2	43	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	114281128	True	NA	NA	False	AATAAA	-14	NA	114281893	114304805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_114282295_114284252_114284534_114304413
transcript_9136.known	chr1	+	1967	5	FSM	ENSG00000198860.14	ENST00000361641.6	1967	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	177.136070578524	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGTGTCTTGAAATC	184048451	True	NA	11	True	AATAAA	-13	NA	184051675	184074206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072311_184072826
transcript_91365.nnic	chr8	+	1109	2	NIC	ENSG00000254339.6	novel	1734	3	NA	NA	-54	-399	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCCAAGAGGGAATC	114281217	False	NA	-50	True	AATATA	-23	NA	114281982	114296262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_114282295_114295465
transcript_91367.known	chr8	+	866	3	FSM	ENSG00000254339.6	ENST00000521523.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_2	592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTTATCATGGAAGTAT	114265206	True	NA	NA	False	NA	NA	NA	114282066	114295807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284515_114295465
transcript_91368.known	chr8	+	730	3	FSM	ENSG00000254339.6	ENST00000519248.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAAAGTCTTCTT	114265275	False	NA	NA	False	NA	NA	NA	114282135	114287996	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284515_114287721
transcript_91369.nnic	chr8	-	823	4	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_3	18.6964048831735	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATCCTTTACA	-114504344	True	NA	NA	False	ATTAAA	-28	NA	114504527	114302730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr8_-_114303145_114304406_114304496_114394909_114394988_114504285
transcript_91370.nnic	chr8	-	666	4	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_3	18.6964048831735	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCATTTTCTTTGATGAA	-114504344	True	NA	NA	False	ATTAAA	-15	NA	114504527	114302887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr8_-_114303145_114304406_114304496_114394909_114394988_114504285
transcript_91372.known	chr8	-	1265	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	751.92432298736	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGATGTATTTTCTCT	-116738331	True	NA	-11	True	AATAAA	-33	NA	116755823	116644816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726161_116737712_116737716_116755665
transcript_91379.known	chr8	-	3961	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	0	0	0	multi-exon	FALSE	canonical	3	1636	junction_5	79.1758569674532	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATGTAATACACTGT	-116738331	True	NA	-2	True	AATAAA	-16	NA	116755823	116642129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
transcript_9138.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000645963.2	609	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	222.248734529581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	184048531	True	NA	8	True	AATAAA	-18	NA	184051755	184095845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184093624_184093725_184095689
transcript_91381.known	chr8	-	3660	14	FSM	ENSG00000164754.16	ENST00000297338.7	3660	14	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_13	77.9100528260695	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTATTCATTAT	-116864589	True	NA	-1	True	AATAAA	-20	NA	116874776	116845933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_91386.known	chr8	+	3672	3	FSM	ENSG00000147679.12	ENST00000309822.7	3672	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	12.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATCTCCTTGTACTTC	116764241	True	NA	NA	False	ATTAAA	-17	NA	116766523	116774684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_116766792_116770191_116770367_116771455
transcript_9139.known	chr1	+	1844	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	191.731293452292	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048426	True	NA	17	True	AATAAA	-19	NA	184051650	184074212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
transcript_91391.known	chr8	+	2291	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTGAGAATTATCTGG	NA	False	NA	NA	False	AATAAA	-45	NA	116938206	116944487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_116938568_116942557
transcript_91392.known	chr8	+	985	4	FSM	ENSG00000164758.7	ENST00000297347.7	985	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	2.49443825784929	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATTAATGGATTTAC	117518532	True	NA	14	True	AATAAA	-21	NA	117520712	117540262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_117521054_117528650_117528810_117530722_117530828_117539882
transcript_91393.known	chr8	+	476	3	FSM	ENSG00000164758.7	ENST00000522839.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	85	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATATTTAAATTTCCTG	117518652	True	NA	NA	False	TATAAA	-26	NA	117520832	117539978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_117521054_117528650_117528810_117539882
transcript_91395.known	chr8	-	8243	11	FSM	ENSG00000182197.13	ENST00000378204.7	8243	11	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_10	12.0995867698033	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGTTTTCATTCCA	-118108493	True	NA	1	True	AATAAA	-16	NA	118111826	117794489	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_117799898_117804721_117804894_117807216_117807378_117812871_117812962_117818434_117818531_117819675_117819795_117822464_117822598_117830229_117830350_117835443_117835552_117837107_117837202_118110084
transcript_91397.known	chr8	-	782	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.3880419739304	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAAATCTTGCTTTGCT	-118620465	True	NA	NA	False	AAAAAG	-28	NA	118621949	118197546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_914.known	chr1	-	1405	7	FSM	ENSG00000162441.12	ENST00000400903.6	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.2202018532156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACCATCCCCCAGCCT	-9940597	False	NA	-22	True	AATAAA	-17	NA	9942768	9929719	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
transcript_9140.known	chr1	+	2219	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	155.982905046248	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAAACCGACTTCTTT	184048461	True	NA	NA	False	NA	NA	NA	184051685	184097485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
transcript_91400.known	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-118951838	False	47	-2	True	ATTAAA	-20	NA	118951885	118923556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
transcript_91401.known	chr8	+	2826	4	FSM	ENSG00000147676.14	ENST00000614891.5	2826	4	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_2	160.441751285492	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	119198062	True	NA	30	True	AATAAA	-16	NA	119208362	119245673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_119208605_119221586_119221758_119240164_119240321_119243416
transcript_91405.known	chr8	-	5027	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	33.4137696167314	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-119828126	True	NA	-2	True	AATAAA	-17	NA	119832841	119730773	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_91406.known	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	21.8113359288238	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-119849940	True	NA	-34	True	AATAAA	-15	NA	119855894	119833975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
transcript_91407.known	chr8	+	2569	9	FSM	ENSG00000155792.10	ENST00000286234.6	2569	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	6.40312423743285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTTTCATTAGGT	119873687	False	NA	13	True	AATAAA	-20	NA	119873721	120050918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_119873969_119928399_119928579_119929814_119929939_119965231_119965411_120001524_120001711_120002976_120003112_120006804_120006876_120009028_120009134_120049575
transcript_9141.known	chr1	+	1639	5	FSM	ENSG00000198860.14	ENST00000644145.1	1639	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	165.818236331231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAATGTACTTATTAAAAA	184048505	True	NA	NA	False	AATAAA	-20	NA	184051729	184073951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054360_184054436_184054727_184054864_184072156_184072299_184072826
transcript_91410.nic	chr8	+	805	3	ISM	ENSG00000155792.10	ENST00000286234.6	2569	9	-38	120763	-33	-119436	5prime_fragment	FALSE	canonical	3	45	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTATTTAAGTTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	119873683	119930155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_119873969_119928399_119928579_119929814
transcript_91413.known	chr8	+	3067	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	14.3789024082897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	120442817	True	NA	NA	False	AATAAA	-19	NA	120445418	120523636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
transcript_91419.nic	chr8	-	979	7	NIC	ENSG00000172172.8	novel	1260	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_6	632.076669927523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTAGTGTTGCATTTAA	-120436671	True	NA	-6	True	AATAAA	-18	NA	120445159	120395846	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120444947
transcript_9142.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000647465.1	609	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	224.223103180738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	184048493	True	NA	8	True	AATAAA	-18	NA	184051717	184095845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095030_184095093_184095689
transcript_91420.known	chr8	-	1260	7	FSM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_4	74.6445279679332	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-120436662	True	NA	NA	False	NA	NA	NA	120445150	120395436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
transcript_91424.known	chr8	-	1418	6	FSM	ENSG00000172172.8	ENST00000518696.5	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	698.497931278254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-120444839	True	NA	NA	False	NA	NA	NA	120445402	120395436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120443184_120443309_120445067
transcript_91426.known	chr8	+	1981	4	FSM	ENSG00000172167.8	ENST00000522308.1	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	6.48074069840786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	120442820	True	NA	NA	False	NA	NA	NA	120445421	120452829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170
transcript_91428.known	chr8	+	1462	4	FSM	ENSG00000248690.8	ENST00000656304.1	1462	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTACTCTGATAACACA	121641267	True	NA	NA	False	ATTAAA	-7	NA	121641319	121645299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_121641455_121642583_121642732_121643372_121643518_121644265
transcript_91429.known	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	17.0163320241336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-121641059	True	NA	0	True	AATAAA	-16	NA	121641440	121612115	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
transcript_91430.nic	chr8	-	920	2	ISM	ENSG00000170961.7	ENST00000303924.5	4240	4	-121	17014	-121	-17014	5prime_fragment	FALSE	canonical	3	209	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAATCCCTAGAAACC	-121641180	True	NA	NA	False	NA	NA	NA	121641561	121629129	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_121629341_121640852
transcript_91431.known	chr8	-	860	1	FSM	ENSG00000272384.1	ENST00000607710.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGGCCTGCACCTGTT	-122780812	False	NA	-13	True	ATTAAA	-22	NA	122780830	122779970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_122780000_122780800
transcript_91432.known	chr8	+	3478	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_11	35.6403679507437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	123070313	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_91441.nic	chr8	+	1844	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-2	-1233	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGTGCTAAGCTGTGA	123070286	True	NA	NA	False	AATAAA	-16	NA	123072679	123102968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_91442.nic	chr8	+	2228	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-2	-849	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATCTGCTCTTACTGA	123070286	True	NA	3	True	AATAAA	-15	NA	123072679	123103352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_91443.nic	chr8	+	3077	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	123070286	True	NA	2	True	AATAAA	-33	NA	123072679	123104201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_91446.known	chr8	+	1159	7	FSM	ENSG00000156787.17	ENST00000518099.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	20.4911905190716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCTAACTTACCTGGA	123070329	True	NA	NA	False	AATAAA	-13	NA	123072722	123101087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806
transcript_91447.nnic	chr8	+	420	3	NNC	ENSG00000156787.17	novel	1159	7	NA	NA	-2	-6789	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	92	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGTAGTTTCCTTTTT	123070286	True	NA	3	True	ATTAAA	-19	NA	123072679	123077480	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_123072847_123077110_123077258_123077374
transcript_91448.known	chr8	-	3213	8	FSM	ENSG00000136986.10	ENST00000259512.9	3213	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	27.7892946646579	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTGAGGAGTCATAT	-123036742	True	NA	NA	False	AATGAA	-17	NA	123042302	123013169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_91449.known	chr8	-	1994	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	127.78425695887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	-123042106	False	NA	-5	True	AATAAA	-15	NA	123042122	123014148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_9145.nnic	chr1	+	595	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-63	-223	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	94.2452120799778	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTTGCAAAGGAATATT	184382951	True	NA	6	True	ATTAAA	-17	NA	184386965	184619713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_91457.known	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	171.930864658508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-123036742	True	NA	36	True	NA	NA	NA	123042302	123015164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
transcript_91459.known	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	12.2081939696255	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-123237429	True	NA	-10	True	TATAAA	-43	NA	123241377	123219966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_9146.nnic	chr1	+	1291	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-146	390	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	94.2452120799778	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTTCTCCCATTCA	184386871	False	NA	10	True	AATAAA	-21	NA	184386882	184620326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_91460.known	chr8	-	569	6	FSM	ENSG00000189376.12	ENST00000519791.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	57.2174798466343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTGAAGACAAGTGG	-123237338	True	NA	NA	False	NA	NA	NA	123241286	123220194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123220298_123226499_123226633_123231721_123231758_123237797_123237942_123239048_123239145_123241229
transcript_91462.nic	chr8	-	1237	6	NIC	ENSG00000189376.12	novel	948	5	NA	NA	-30	169	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	56.4645021230153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTAGCAGTTCTAT	-123237459	True	NA	NA	False	AATAAA	-19	NA	123241407	123226190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_123226419_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_91464.nnic	chr8	-	1187	5	NIC	ENSG00000189376.12	novel	1310	6	NA	NA	-30	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	64.0209926508485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCTGTCTCAAATGA	-123237459	True	NA	-30	True	TATAAA	-23	NA	123241407	123219986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_123220298_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_91465.known	chr8	-	948	5	FSM	ENSG00000189376.12	ENST00000521310.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	13.2853302555864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTATCCCTCGGGTTTA	-123237396	True	NA	NA	False	NA	NA	NA	123241344	123226497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_9147.known	chr1	+	10293	6	FSM	ENSG00000116667.15	ENST00000235307.7	10293	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	27.6911538221144	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGCTTTGTTCTCTTT	184383014	True	NA	8	True	ATTAAA	-16	NA	184387028	184629019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184387369_184477385_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_91471.nic	chr8	-	771	6	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-66	26456	-20	1693	5prime_fragment	FALSE	canonical	3	150	junction_5	9.8264947972306	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAACAGAAAGATATT	-123390133	True	NA	-21	True	TTTAAA	-32	NA	123396467	123370968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_91472.nic	chr8	-	455	3	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-66	28149	-20	0	5prime_fragment	FALSE	canonical	3	150	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCACAG	-123390133	True	NA	NA	False	AATATA	-27	NA	123396467	123372661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_123372687_123380528_123380678_123396186
transcript_91477.known	chr8	+	909	7	FSM	ENSG00000156795.8	ENST00000517609.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.1126489443369	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTACTTGCTAAGATATT	123415276	True	NA	52	True	CATAAA	-40	NA	123416791	123441623	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_91478.nic	chr8	+	1382	7	NIC	ENSG00000156795.8	novel	869	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	35.9834066696798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGAAGATTTTT	123415205	True	NA	14	True	AATAAA	-16	NA	123416720	123442021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123438133_123438239_123441305
transcript_91480.known	chr8	+	764	7	FSM	ENSG00000156795.8	ENST00000524254.5	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	28.8121309328014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAAGAGCCACCATCAG	123415239	True	NA	NA	False	NA	NA	NA	123416754	123448091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441498_123448046
transcript_91481.known	chr8	+	949	7	FSM	ENSG00000156795.8	ENST00000519199.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.2076595444831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTCAAATTGAAACTT	123415285	True	NA	25	True	TATAAA	-26	NA	123416800	123441596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_91482.known	chr8	+	869	7	FSM	ENSG00000156795.8	ENST00000523356.1	869	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	36.0296945433748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTAATTTGATTGAGT	123415297	True	NA	-47	True	NA	NA	NA	123416812	123441524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123438133_123438239_123441305
transcript_91484.known	chr8	+	1491	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	15.7480157480236	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	123415210	True	NA	NA	False	NA	NA	NA	123416725	123442240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_91486.known	chr8	+	1519	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	12.6491106406735	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	123415258	True	NA	NA	False	NA	NA	NA	123416773	123442240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_91488.known	chr8	+	2207	1	FSM	ENSG00000183665.5	ENST00000328599.4	2207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTTAAGAATCACCAGT	124450405	True	NA	NA	False	TATAAA	-22	NA	124450819	124453026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124450800_124453000
transcript_91489.known	chr8	-	1767	1	FSM	ENSG00000245149.5	ENST00000530778.1	1767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCTTCAGTCTTTA	-124474483	True	NA	NA	False	AATAAA	-30	NA	124474576	124472809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124472800_124474600
transcript_91492.known	chr8	-	990	13	FSM	ENSG00000147687.19	ENST00000522810.5	990	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	145.998929790598	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATACTATTAAAGTATT	-124534287	True	NA	-52	True	AATACA	-7	NA	124539070	124488629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504274_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_915.known	chr1	-	652	5	FSM	ENSG00000162441.12	ENST00000488540.5	652	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	54.4397602860262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-9933449	False	NA	-3	True	AATAAA	-23	NA	9935620	9922112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491
transcript_91506.nic	chr8	-	1128	12	NIC	ENSG00000147687.19	novel	1134	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_8	100.827731329028	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTCTAAAGAAATACTAT	-124534335	True	NA	70	True	AATAAA	-15	NA	124539118	124488507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124539024
transcript_91508.known	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_11	48.2791469793932	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-124534302	True	NA	80	True	AATAAA	-25	NA	124539085	124488497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_9152.known	chr1	+	3407	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	34.5253530032641	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	185043389	True	NA	NA	False	ATTAAA	-25	NA	185045557	185102603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
transcript_91520.known	chr8	-	889	10	FSM	ENSG00000147687.19	ENST00000519548.5	889	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	130.458545518358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGTTGTCTAAAGAAAT	-124534293	True	NA	65	True	AATAAA	-10	NA	124539076	124488512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124539024
transcript_91522.known	chr8	-	915	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	130.809540181399	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATACTATATATCGG	-124534305	True	NA	77	True	AATAAA	-22	NA	124539088	124488500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
transcript_91528.known	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_8	55.8993235647803	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-124534299	True	NA	-23	True	ATTAAA	-1	NA	124539082	124504173	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_91531.known	chr8	-	629	8	FSM	ENSG00000147687.19	ENST00000520321.5	629	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	170.926646159535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTTCTTAGGTTGCTTT	-124534289	True	NA	NA	False	NA	NA	NA	124539072	124504270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124539024
transcript_91532.known	chr8	-	667	8	FSM	ENSG00000147687.19	ENST00000522310.5	667	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	160.418839547083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTTCTTAGGTTGCTTT	-124534311	True	NA	NA	False	NA	NA	NA	124539094	124504270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522936_124523003_124539024
transcript_91538.known	chr8	+	1423	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	1261.20497937488	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATACAGGACTTTTT	124524526	True	NA	NA	False	NA	NA	NA	124539177	124550768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
transcript_91539.known	chr8	+	636	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1384.67428982013	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	124524492	True	NA	16	True	AATAAA	-17	NA	124539143	124549978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
transcript_91542.known	chr8	-	690	7	FSM	ENSG00000147687.19	ENST00000520938.3	690	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	156.248111099694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAAACCAAAGTCT	-124534305	True	NA	NA	False	NA	NA	NA	124539088	124508602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124538927
transcript_91543.known	chr8	+	3199	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	124473383	True	NA	NA	False	NA	NA	NA	124474879	124488618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124475291_124485830
transcript_91544.known	chr8	+	3278	3	FSM	ENSG00000180938.6	ENST00000319286.6	3278	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTGGAGAATTTGGGGG	124973102	True	NA	9	True	AATAAA	-20	NA	124973294	124979389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124973417_124975605_124975720_124976347
transcript_91547.known	chr8	+	2962	11	FSM	ENSG00000104549.12	ENST00000265896.10	2962	11	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_1	46.8453839775063	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	124981932	True	NA	12	True	AATAAA	-13	NA	124998504	125022283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124999695_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_91551.known	chr8	+	1879	11	FSM	ENSG00000104549.12	ENST00000523430.5	1879	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	300.330634468081	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCGTGTCTTTTTGTT	124981924	True	NA	10	True	AATAAA	-11	NA	124998496	125022281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124998606_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_91557.known	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	31.16185527997	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	125089906	True	NA	5	True	AATAAA	-17	NA	125091859	125367120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_91560.nic	chr8	+	1241	8	NIC	ENSG00000156831.8	novel	1188	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	42.8847530110216	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	125089890	True	NA	5	True	AATAAA	-17	NA	125091843	125367120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_91561.known	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.2031744746377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	125089916	True	NA	-40	True	AAAACA	-42	NA	125091869	125367075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_91567.known	chr8	+	1183	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	33.9521722427299	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTAGTGGACATAA	125089890	True	NA	NA	False	AATAAA	-12	NA	125091843	125182796	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_91572.nic	chr8	+	795	5	ISM	ENSG00000156831.8	ENST00000517532.5	841	7	0	175400	0	-59	5prime_fragment	FALSE	canonical	3	16	junction_1	54.5819338242976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTTGCGTTTTATTG	125089890	True	NA	16	True	TATAAA	-30	NA	125091843	125182371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102
transcript_91578.known	chr8	+	848	5	FSM	ENSG00000156831.8	ENST00000519010.5	848	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	59.5876455316033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGGGAAATTGGGAAAAC	125089890	True	NA	-49	True	NA	NA	NA	125091843	125182519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091901_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_91579.known	chr8	+	592	4	FSM	ENSG00000156831.8	ENST00000523824.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.4944441975089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCCTTATCCTTAATG	125089916	True	NA	NA	False	NA	NA	NA	125091869	125151369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170
transcript_9158.known	chr1	+	1677	6	FSM	ENSG00000121481.11	ENST00000367509.8	1677	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	129.852839784119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGAGAGTGCTTTTTT	185044999	False	NA	22	True	ATTAAA	-29	NA	185045525	185101057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185098071_185098345_185099790_185099963_185100199
transcript_91581.known	chr8	-	4139	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	0	0	0	multi-exon	FALSE	canonical	2	179	junction_22	41.5632509138856	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	-125087666	True	NA	-1	True	AGTAAA	-22	NA	125091792	125024259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_91582.known	chr8	+	498	3	FSM	ENSG00000253438.5	ENST00000517773.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTATGAAATTGGG	126557775	True	NA	NA	False	NA	NA	NA	126557885	126617741	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_126557932_126589191_126589291_126617388
transcript_91583.known	chr8	+	3721	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	114	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTCCTAGAATAATC	127732692	True	NA	NA	False	AATAAA	-17	NA	127736230	127742951	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127736624_127738247_127739020_127740395
transcript_9159.known	chr1	-	4361	15	FSM	ENSG00000121486.12	ENST00000367506.10	4361	15	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_13	14.2006395371936	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGAGTTAAGGAAACCAG	-185155179	True	NA	-20	True	ATTAAA	-16	NA	185156953	185118100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_185120272_185120382_185120510_185123856_185123920_185124943_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_91591.known	chr8	+	1581	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	44.7113189339828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792572	True	NA	38	True	ATTAAA	-18	NA	127794532	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_91594.known	chr8	+	1410	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	24.7571538482651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	127792598	True	NA	36	True	ATTAAA	-16	NA	127794558	128101254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_91597.known	chr8	+	1449	7	FSM	ENSG00000249859.13	ENST00000661205.1	1449	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	34.153656059377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795449	True	NA	38	True	ATTAAA	-18	NA	127795795	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_91599.known	chr8	+	1756	7	FSM	ENSG00000249859.13	ENST00000670714.1	1756	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	39.4014241141386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795503	False	NA	38	True	ATTAAA	-18	NA	127795551	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796072_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_91601.known	chr8	+	1321	6	FSM	ENSG00000249859.13	ENST00000670223.1	1321	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	35.4265437207752	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792576	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_91602.known	chr8	+	1262	6	FSM	ENSG00000249859.13	ENST00000653845.1	1262	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.7713030377496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792577	True	NA	38	True	ATTAAA	-18	NA	127794537	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070161_128070273_128096517_128096655_128100979
transcript_91606.known	chr8	+	1378	6	FSM	ENSG00000249859.13	ENST00000657667.1	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.7593103391328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795407	True	NA	38	True	ATTAAA	-18	NA	127795753	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_91609.known	chr8	+	1152	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	43.8826560271823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792576	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_91613.known	chr8	+	861	3	FSM	ENSG00000249859.13	ENST00000664214.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	48	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTATCTTATAAT	127792566	True	NA	NA	False	AATAAA	-28	NA	127794526	127932707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127932464
transcript_91614.known	chr8	+	1516	3	FSM	ENSG00000249859.13	ENST00000669416.1	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTATCTTATAATACA	127793188	False	NA	NA	False	AATAAA	-31	NA	127795148	127932710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796009_127890588_127890999_127932464
transcript_91615.known	chr8	+	1546	3	FSM	ENSG00000249859.13	ENST00000661160.1	1546	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTATCTTATAATA	127793219	False	NA	NA	False	AATAAA	-29	NA	127795179	127932708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796072_127890588_127890999_127932464
transcript_91618.known	chr8	-	892	2	FSM	ENSG00000254275.6	ENST00000520824.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAAAGGATGTGGGTCA	NA	False	NA	NA	False	NA	NA	NA	128561126	128559713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_128560549_128561069
transcript_91629.nic	chr8	-	1912	14	NIC	ENSG00000153310.20	novel	2024	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_12	328.83583429602	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-130015275	True	NA	-5	True	AATAAA	-22	NA	130016445	129841469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016369
transcript_9163.nic	chr1	-	2113	12	ISM	ENSG00000121486.12	ENST00000367506.10	4361	15	-9	6739	-9	0	5prime_fragment	FALSE	canonical	3	173	junction_10	14.3992653623442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTAGTAAATC	-185155188	True	NA	NA	False	AATAAA	-18	NA	185156962	185124839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_91630.known	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	344.202207667693	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-130016658	False	NA	-5	True	AATAAA	-22	NA	130016672	129841469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
transcript_91636.known	chr8	-	2021	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_12	234.86107004402	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCAGCTTTCATT	NA	False	NA	-32	True	NA	NA	NA	129939872	129841496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
transcript_91638.known	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_11	325.834910482117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-130015281	True	NA	-19	True	AATAAA	-8	NA	130016451	129841483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
transcript_9164.known	chr1	+	3838	19	FSM	ENSG00000116668.13	ENST00000367500.9	3838	19	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	8.82634244677003	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	185156520	True	NA	3	True	AATAAA	-18	NA	185157166	185291781	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_91648.known	chr8	-	3798	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_11	220.800609353573	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	-129939814	False	NA	-5	True	AATAAA	-18	NA	129939832	129839592	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
transcript_91651.nic	chr8	-	1928	12	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_9	256.259263085952	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-129939817	False	NA	-5	True	AATAAA	-22	NA	129939835	129841469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_91655.nic	chr8	-	1861	11	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_9	242.940239565207	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-5	True	AATAAA	-22	NA	129939855	129841469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
transcript_91656.known	chr8	-	1700	11	FSM	ENSG00000153310.20	ENST00000522941.5	1700	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	355.158218263354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAATAAAAATCAGCT	-129926683	True	NA	-38	True	NA	NA	NA	129939746	129841502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_91657.known	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	307.081281715846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-129926631	True	NA	-19	True	AATAAA	-8	NA	129939694	129841483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
transcript_91663.known	chr8	-	533	2	FSM	ENSG00000153310.20	ENST00000523514.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGAGGTTGCAGTGAGCT	-130016638	False	NA	NA	False	AATACA	-23	NA	130016652	129970508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129970996_130016606
transcript_91664.known	chr8	+	884	5	FSM	ENSG00000253507.6	ENST00000524275.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1242.22391298831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTCATTGTGCTGGA	131306906	True	NA	NA	False	NA	NA	NA	131308544	131317632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_131308672_131310552_131310713_131312555_131312730_131315759_131315884_131317333
transcript_91665.known	chr8	+	854	5	FSM	ENSG00000253507.6	ENST00000519695.6	1158	5	0	304	0	-49	multi-exon	FALSE	canonical	3	174	junction_3	1217.46067698304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGCACTTCAGCGGCT	131306906	True	NA	NA	False	ATTAAA	-26	NA	131308544	131317583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_131308672_131310552_131310713_131312555_131312749_131315759_131315884_131317333
transcript_91669.nnic	chr8	+	1064	4	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	565	junction_1	1090.04617639193	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	NA	False	NA	27	True	AATAAA	-20	NA	131308514	131317887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_131308672_131310552_131310713_131312555_131312749_131317333
transcript_91673.known	chr8	+	731	4	FSM	ENSG00000253507.6	ENST00000519005.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	1374.85861899405	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAACTGAGGACAACAA	131302356	True	NA	NA	False	NA	NA	NA	131310471	131317506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_131310713_131312555_131312749_131315759_131315884_131317333
transcript_91677.nnic	chr8	+	1023	3	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	73	junction_2	1511.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	131310394	True	NA	27	True	AATAAA	-20	NA	131310417	131317887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_131310713_131312555_131312730_131317333
transcript_91678.nnic	chr8	+	725	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	-28	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	1149	junction_2	973.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131302328	True	NA	16	True	AATAAA	-22	NA	131310443	131315811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_131310713_131312555_131312749_131315548
transcript_91679.nnic	chr8	+	1145	3	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-157	0	combination_of_known_splicesites	FALSE	canonical	3	1094	junction_2	1001	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	131308676	False	NA	27	True	AATAAA	-20	NA	131310314	131317887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_131310713_131312555_131312749_131317333
transcript_91682.nnic	chr8	+	903	3	NNC	ENSG00000253507.6	novel	1158	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_1	471.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	131302345	True	NA	27	True	AATAAA	-20	NA	131310460	131317887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_131310713_131312651_131312749_131317333
transcript_91683.nnic	chr8	+	828	2	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	131310415	False	NA	27	True	AATAAA	-20	NA	131310438	131317887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_131310713_131317333
transcript_91688.nnic	chr8	-	2608	18	NIC	ENSG00000258417.3	novel	2413	18	NA	NA	-17	22	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	47.9731758958726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGATTGTTTTGCTTT	-132085658	False	NA	-3	True	AATAAA	-15	NA	132085672	132024215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_132024777_132029072_132029180_132031880_132032053_132033038_132033165_132034780_132034835_132036370_132036419_132037437_132037489_132038789_132038832_132038994_132039124_132041043_132041157_132041524_132041700_132044432_132044490_132045817_132045884_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_91695.known	chr8	-	3343	12	FSM	ENSG00000129295.10	ENST00000620350.5	3343	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.25359400797085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTATGGACTGAATAAT	-132675293	True	NA	NA	False	ATTAAA	-18	NA	132675545	132570415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_132572481_132583693_132583780_132610165_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_917.known	chr1	+	625	4	FSM	ENSG00000162444.12	ENST00000294435.8	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	0.816496580927726	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTTTTCCTTTCCG	9996906	True	NA	10	True	AATAAA	-15	NA	9997227	10016021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9997332_10007569_10007749_10008172_10008275_10015781
transcript_91706.known	chr8	-	1736	12	FSM	ENSG00000129295.10	ENST00000519595.5	1736	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	3.64997452725177	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAAGATCATAGAACT	-132675340	True	NA	NA	False	AATAAA	-19	NA	132675592	132572069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_132572481_132583693_132583776_132610161_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_91708.known	chr8	-	2995	9	FSM	ENSG00000155926.14	ENST00000338087.10	2995	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.45236875482778	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGGAGAGTTTCTGGGT	NA	False	NA	1	True	AATAAA	-17	NA	133102602	133036727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_133038738_133039997_133040131_133044983_133045116_133047829_133047934_133049901_133049989_133050815_133050916_133060099_133060201_133074852_133075131_133102552
transcript_91709.known	chr8	-	3025	16	FSM	ENSG00000104419.17	ENST00000323851.13	3025	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.74610678049451	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTTGTGTCTTTTTTCT	-133297220	True	NA	-4	True	AATAAA	-15	NA	133297252	133237174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_133239120_133242022_133242075_133244354_133244391_133246615_133246664_133247874_133247927_133248714_133248772_133250439_133250544_133254538_133254596_133256776_133256864_133258365_133258427_133259167_133259231_133262046_133262168_133264546_133264653_133280231_133280268_133284248_133284330_133297133
transcript_91711.known	chr8	+	679	1	FSM	ENSG00000261220.2	ENST00000561761.2	679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTTATTGTATGGAT	133573015	False	NA	NA	False	AATAAA	-25	NA	133573182	133573861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_133573200_133573900
transcript_91712.known	chr8	+	1978	9	FSM	ENSG00000131773.14	ENST00000355849.10	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	9.27024810886958	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGAGCTAAC	135456212	True	NA	14	True	AATAAA	-14	NA	135457455	135647610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_135457955_135521236_135521356_135542653_135542771_135548753_135548901_135557447_135557588_135581877_135582074_135606954_135607038_135645058_135645118_135646992
transcript_91714.known	chr8	+	2481	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	7.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	140507515	True	NA	8	True	ATTAAA	-23	NA	140511321	140517154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_140511647_140514368_140514496_140515125
transcript_91716.known	chr8	+	811	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	120	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAGATCTGTACATA	140511832	True	NA	NA	False	AATATA	-6	NA	140511981	140515765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_140512026_140514368_140514496_140515125
transcript_91717.known	chr8	+	1678	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAAAGTTTATAA	140507504	True	NA	NA	False	NA	NA	NA	140511310	140516467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_140511647_140515125
transcript_91719.known	chr8	-	4388	33	FSM	ENSG00000169398.19	ENST00000519993.5	4388	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.557036775078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTTGTTGTAATATC	-141001345	False	NA	-23	True	ATTAAA	-15	NA	141001379	140658404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140762367_140762389_140764233_140764291_140769574_140769593_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
transcript_9172.known	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	512.507543575919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-185296895	True	NA	-1	True	GATAAA	-15	NA	185317273	185297014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_91721.known	chr8	-	4955	32	FSM	ENSG00000169398.19	ENST00000522684.5	4955	32	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_31	86.1849039512993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATCTTTGGATCTGTG	-140993189	True	NA	NA	False	AATACA	-21	NA	141001233	140657899	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_91725.known	chr8	-	571	4	FSM	ENSG00000169398.19	ENST00000520892.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	177.994381933813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGATTTCTTTTGCTT	-141000903	False	NA	NA	False	NA	NA	NA	141000937	140879440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140879638_140890542_140890770_140925660_140925750_141000879
transcript_91727.known	chr8	-	602	4	FSM	ENSG00000169398.19	ENST00000520045.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	185.735175870258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTGGAAGTAAGATAC	-140993241	True	NA	NA	False	NA	NA	NA	141001285	140879481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140879638_140890542_140890770_140948665_140948724_141001124
transcript_91731.known	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	98	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-140993240	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140879638_140890542_140890770_141001124
transcript_91734.known	chr8	-	483	2	FSM	ENSG00000253210.3	ENST00000520885.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCGAGCACAGCATTGTG	-141127969	False	NA	-108	True	TATAAA	-25	NA	141128121	141126043	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_141126472_141128066
transcript_91736.nnic	chr8	+	1849	6	NNC	ENSG00000184489.13	novel	2849	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	28	junction_2	79.9089481847934	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141390584	True	NA	18	True	AATAAA	-13	NA	141392014	141431520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_141392085_141421387_141422274_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_91737.known	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	41.4805978741869	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	141390590	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_9174.nnic	chr1	-	2826	15	NNC	ENSG00000116679.16	novel	3657	16	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_7	412.730238775886	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTTCAAGAAGTCCC	-185296940	True	NA	-29	True	AATAAA	-18	NA	185317318	185297770	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305514_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_91745.nnic	chr8	-	793	3	NIC	ENSG00000234616.9	novel	2823	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGCCTCAGGTGTTA	-142667930	True	NA	NA	False	AATAAA	-18	NA	142669983	142657462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_142658081_142658821_142658945_142669931
transcript_91747.known	chr8	+	740	5	FSM	ENSG00000160932.11	ENST00000521003.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	560.567290786753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGGTCAGGCCCACCC	143003150	True	NA	NA	False	NA	NA	NA	143018528	143021902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020261_143020378_143020882_143020992_143021313_143021434_143021565
transcript_91748.known	chr8	+	1256	5	FSM	ENSG00000160932.11	ENST00000521699.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	560.567290786753	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTCTGAGTGTGGCT	143003138	True	NA	33	True	AATAAA	-18	NA	143018516	143022411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021565
transcript_91749.known	chr8	+	1419	5	FSM	ENSG00000160932.11	ENST00000520466.5	1419	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	554.459646863503	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	143003149	True	NA	31	True	AATAAA	-16	NA	143018527	143022409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143018832_143019120_143020882_143020992_143021313_143021434_143021565
transcript_9175.known	chr1	-	4113	15	FSM	ENSG00000116679.16	ENST00000367498.8	4113	15	0	0	0	0	multi-exon	TRUE	canonical	3	1506	junction_11	80.8084154033477	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGATCACTTCTCAT	-185296865	True	NA	-16	True	AATAAA	-28	NA	185317243	185296387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_91750.known	chr8	+	868	5	FSM	ENSG00000160932.11	ENST00000522024.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	563.292552764547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCTTGGTCCCAGGTC	143003178	True	NA	NA	False	NA	NA	NA	143018556	143021892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143018832_143019120_143020887_143020992_143021313_143021434_143021565
transcript_91752.known	chr8	+	857	4	FSM	ENSG00000160932.11	ENST00000522971.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	531.216423775554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGGGGAGGGAGGT	143003163	True	NA	NA	False	NA	NA	NA	143018541	143022182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020916_143020992_143021313_143021434_143021565
transcript_91753.known	chr8	-	759	2	FSM	ENSG00000247317.4	ENST00000518831.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGAGTGCAGGCCACT	NA	False	NA	NA	False	NA	NA	NA	143018437	143016665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143017147_143018159
transcript_91754.known	chr8	+	1079	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	450.271276257127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	143003167	True	NA	31	True	AATAAA	-16	NA	143018545	143022409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
transcript_91755.known	chr8	+	1131	4	FSM	ENSG00000160932.11	ENST00000292494.11	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	843	junction_1	142.030513153571	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	143003150	True	NA	31	True	AATAAA	-16	NA	143018528	143022409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021565
transcript_91756.known	chr8	+	427	4	FSM	ENSG00000160932.11	ENST00000523847.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	494.590290599761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTTGCGCTTCCATCT	143003174	True	NA	5	True	NA	NA	NA	143018552	143023832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143023668
transcript_91757.known	chr8	+	1300	4	FSM	ENSG00000261667.2	ENST00000562505.2	1300	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCATTCCTTCCTTC	143080605	True	NA	3	True	AATAAA	-15	NA	143080629	143083486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143080660_143081035_143081127_143081210_143081328_143082424
transcript_91759.known	chr8	-	660	3	FSM	ENSG00000253716.7	ENST00000517411.3	684	3	21	3	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	14.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-143280714	True	NA	-12	True	AATAAA	-20	NA	143281670	143280160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143280516_143280881_143280998_143281481
transcript_91761.known	chr8	-	379	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	2	667	1	0	multi-exon	FALSE	canonical	3	45	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-143280734	True	NA	-14	True	ATTAAA	-16	NA	143281690	143280827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143280998_143281481
transcript_91762.known	chr8	-	1527	1	FSM	ENSG00000253716.7	ENST00000671046.1	1527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-143280731	True	NA	-12	True	AATAAA	-20	NA	143281687	143280160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143280200_143281700
transcript_91764.known	chr8	-	1982	15	FSM	ENSG00000184428.13	ENST00000523676.5	1982	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_13	106.135766923352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATTTTGTACAATAAA	-143327982	True	NA	-4	True	ATTAAA	-9	NA	143334795	143309376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334107_143334286_143334739
transcript_91765.known	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_13	26.3512909084997	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-143328067	True	NA	-3	True	AATAAA	-34	NA	143334880	143309323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
transcript_91769.known	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGATGGAGTCTTG	-143368346	True	NA	-7	True	NA	NA	NA	143368548	143366630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143366600_143368500
transcript_91770.known	chr8	+	417	2	FSM	ENSG00000254338.1	ENST00000519762.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTTCCTTCAGCTCT	143417318	False	NA	12	True	ATTAAA	-21	NA	143417678	143419150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143417920_143418974
transcript_91771.known	chr8	+	1723	11	FSM	ENSG00000104518.11	ENST00000262580.9	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	11.8932754109202	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	143558276	False	NA	19	True	AATAAA	-19	NA	143558345	143563062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_91772.nic	chr8	+	2410	10	NIC	ENSG00000104518.11	novel	1723	11	NA	NA	-46	0	intron_retention	FALSE	canonical	3	117	junction_1	10.4986771653491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	143558222	False	NA	19	True	AATAAA	-19	NA	143558291	143563062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_143558452_143559331_143559553_143559776_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_91774.known	chr8	-	2350	10	FSM	ENSG00000104529.19	ENST00000618139.4	2090	10	-260	0	4	0	multi-exon	FALSE	canonical	3	20	junction_9	1800.376071825	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597675	143579727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143592646_143592661_143597347
transcript_91779.known	chr8	-	1118	9	FSM	ENSG00000104529.19	ENST00000534380.6	1118	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	1673.36210497758	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578553	True	NA	-42	True	ATTAAA	-6	NA	143597362	143579735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143593874_143594072_143597347
transcript_91784.known	chr8	-	1143	9	FSM	ENSG00000104529.19	ENST00000530191.6	1143	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1675.8930781452	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578593	True	NA	-42	True	ATTAAA	-6	NA	143597402	143579735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143593892_143594072_143597347
transcript_91788.known	chr8	-	861	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1332.6258565214	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	-143578578	True	NA	-35	True	ATTAAA	-13	NA	143597387	143579728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
transcript_91794.known	chr8	-	1458	8	FSM	ENSG00000104529.19	ENST00000317198.10	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	1348.88646441335	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGGCCTGTCTCCCTC	-143578579	True	NA	-3	True	ATTAAA	-45	NA	143597388	143579696	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143596878
transcript_91795.known	chr8	-	1311	8	FSM	ENSG00000104529.19	ENST00000529272.5	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_7	1167.88975926494	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597744	143579727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143597347
transcript_918.known	chr1	+	1273	3	FSM	ENSG00000130939.20	ENST00000377153.5	1273	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	145.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTCTGTATGTCTCT	10033255	False	NA	NA	False	AATAAA	-19	NA	10033273	10073118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10033695_10072027_10072215_10072453
transcript_9180.nic	chr1	-	2901	8	NIC	ENSG00000116679.16	novel	3657	16	NA	NA	-45	1756	intron_retention	FALSE	canonical	3	148	junction_1	515.256781634563	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTGATTGAGTTACTT	-185296940	True	NA	-5	True	ATTAAA	-17	NA	185317318	185304993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_91801.known	chr8	-	899	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1557.08931755925	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578588	True	NA	-42	True	ATTAAA	-6	NA	143597397	143579735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
transcript_91803.known	chr8	-	831	7	FSM	ENSG00000104529.19	ENST00000533833.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1699.79849295929	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578619	True	NA	-34	True	ATTAAA	-14	NA	143597428	143579727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586728_143586853_143597347
transcript_91810.known	chr8	-	886	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_6	1616.21316663366	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578590	True	NA	-42	True	ATTAAA	-6	NA	143597399	143579735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
transcript_91813.known	chr8	-	840	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1664.47376568892	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	-143578591	True	NA	-35	True	ATTAAA	-13	NA	143597400	143579728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
transcript_91818.known	chr8	-	1212	7	FSM	ENSG00000147813.16	ENST00000464332.5	1212	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	25.130769099961	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTCCTGTGTTGTTT	-143576668	False	NA	-4	True	GGGGCT	-36	NA	143576801	143574786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576573_143576645
transcript_9182.known	chr1	+	752	1	FSM	ENSG00000273004.1	ENST00000609881.1	752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTACAACTTTTTTTC	185317762	False	NA	NA	False	AATAAA	-23	NA	185317778	185318530	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185317800_185318500
transcript_91825.known	chr8	-	2678	6	FSM	ENSG00000104524.14	ENST00000220966.10	2678	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	5.38144961882948	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGTC	-143599158	False	NA	NA	False	NA	NA	NA	143609614	143603912	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
transcript_91832.known	chr8	-	533	3	FSM	ENSG00000104529.19	ENST00000530109.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	4144	junction_1	100.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143580717	False	NA	-34	True	ATTAAA	-14	NA	143580740	143579727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505
transcript_91833.known	chr8	-	2207	10	FSM	ENSG00000104529.19	ENST00000442189.6	2207	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	1803.933384114	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578606	True	NA	-34	True	ATTAAA	-14	NA	143597415	143579727	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143590607_143590739_143597347
transcript_91837.known	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_10	200.976142862779	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607026	True	NA	-11	True	AATAAA	-17	NA	143617482	143612617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
transcript_91838.known	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_10	91.1757094844893	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	NA	False	NA	-11	True	AATAAA	-17	NA	143617549	143612617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_9184.nic	chr1	-	2414	18	NIC	ENSG00000047410.14	novel	2478	18	NA	NA	-63	-1652	combination_of_known_junctions	FALSE	canonical	3	42	junction_17	61.0646036026501	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	-186374777	True	NA	NA	False	AAAAAG	-6	NA	186375756	186355522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
transcript_91845.nic	chr8	-	1528	10	NIC	ENSG00000104522.16	novel	1345	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	486	junction_9	90.9140144570206	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	NA	False	NA	-11	True	AATAAA	-17	NA	143617562	143612617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_9185.known	chr1	-	9636	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_37	98.2437702859576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTGTAATTCTTTAA	-186365834	True	NA	NA	False	AATAAA	-7	NA	186375253	186311651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_9186.nic	chr1	-	2418	17	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-63	1652	-63	-1652	5prime_fragment	FALSE	canonical	3	232	junction_3	26.9350346899721	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	-186374409	False	NA	NA	False	AAAAAG	-6	NA	186375388	186355522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_91865.known	chr8	-	951	7	FSM	ENSG00000104522.16	ENST00000532308.5	951	7	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_6	107.103791820002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCATCATCCTCTCCGG	NA	False	NA	NA	False	AATGAA	-4	NA	143617532	143613769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_91866.known	chr8	+	3960	2	FSM	ENSG00000183309.12	ENST00000526926.6	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTCAGTAGTTC	143634345	True	NA	NA	False	NA	NA	NA	143636018	143653730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143636146_143649897
transcript_91867.known	chr8	+	567	5	FSM	ENSG00000181135.16	ENST00000534303.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.58602010819715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGCCCACGGCTTTCC	143683277	True	NA	NA	False	NA	NA	NA	143684452	143693839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_91868.known	chr8	+	2114	5	FSM	ENSG00000181135.16	ENST00000533031.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.64005494464026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTTTCAGGTT	143683280	True	NA	-19	True	NA	NA	NA	143684455	143695356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143684543_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_91869.known	chr8	+	444	2	FSM	ENSG00000181135.16	ENST00000525619.5	444	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGGGCACGCACCT	143683286	True	NA	NA	False	AATACA	-4	NA	143684461	143690419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143684543_143690056
transcript_91870.known	chr8	+	1871	14	FSM	ENSG00000181085.15	ENST00000338033.9	1871	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	6.7893058964973	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	143716096	True	NA	8	True	AATAAA	-18	NA	143716348	143722458	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_91878.known	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	621.597767952851	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828971	False	20809	-28	True	GATAAA	-25	NA	143829026	143816376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_91879.known	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_7	456.237650121545	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	-143808506	True	NA	5	True	NA	NA	NA	143829315	143816343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_91883.known	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_10	613.889371141088	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143829248	False	NA	-28	True	GATAAA	-25	NA	143829303	143816376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
transcript_91884.known	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	588.825959006564	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828984	False	20809	-28	True	GATAAA	-25	NA	143829039	143816376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_91885.known	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_7	364.01565900384	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143808543	True	NA	-28	True	GATAAA	-25	NA	143829352	143816376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_9189.nic	chr1	-	1372	10	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-63	6981	-63	-6981	5prime_fragment	FALSE	canonical	3	245	junction_1	26.0104442460436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAAGAAATGCTTGAG	-186374409	False	NA	0	True	AATACA	-39	NA	186375388	186360851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_91890.known	chr8	-	1559	10	FSM	ENSG00000179950.14	ENST00000527197.5	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_9	576.261514707805	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCCTCTCCCCGGA	-143808511	True	NA	NA	False	NA	NA	NA	143829320	143816519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143829279
transcript_91906.known	chr8	+	1858	7	FSM	ENSG00000178719.17	ENST00000395068.9	1858	7	0	0	0	0	multi-exon	TRUE	canonical	3	313	junction_2	46.639575469766	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	143985462	True	NA	18	True	AATAAA	-18	NA	143990055	143993415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143990200_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_91908.nic	chr8	+	903	3	FSM	ENSG00000204791.11	ENST00000686861.1	869	3	-34	0	-32	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	144050474	False	NA	9	True	ATTAAA	-16	NA	144050494	144051646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144050629_144050794_144050859_144050941
transcript_91912.nic	chr8	+	986	2	FSM	ENSG00000204791.11	ENST00000691496.1	963	2	-32	9	-32	0	multi-exon	FALSE	canonical	3	16	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	144050474	False	NA	9	True	ATTAAA	-16	NA	144050494	144051646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144050629_144050794
transcript_91916.known	chr8	+	842	3	FSM	ENSG00000178896.9	ENST00000316052.6	842	3	0	0	0	0	multi-exon	FALSE	canonical	2	362	junction_1	45	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACTGTACGTTATCA	144069646	True	NA	19	True	AATAAA	-20	NA	144078671	144080648	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144078900_144079942_144080150_144080241
transcript_91918.known	chr8	-	1264	1	FSM	ENSG00000255224.1	ENST00000524499.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGCAATCTGGGG	-144079151	False	NA	-11	True	AATAAA	-14	NA	144079265	144078001	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144078000_144079300
transcript_91919.known	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	36.8447715433634	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	144079294	True	NA	16	True	AATAAA	-23	NA	144082633	144086216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_91927.known	chr8	+	1840	11	FSM	ENSG00000197858.11	ENST00000361036.10	1840	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	180.880623616793	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	144079328	True	NA	16	True	AATAAA	-23	NA	144082667	144086216	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144082805_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_91928.known	chr8	+	1832	6	FSM	ENSG00000179091.5	ENST00000533444.1	1832	6	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_2	137.428672408635	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	144069213	True	NA	14	True	AATAAA	-18	NA	144095038	144097525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_9193.nnic	chr1	+	1758	15	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	50.9067274332105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTGTTTAGCCTGCT	186374209	True	NA	6	True	ATTAAA	-13	NA	186375840	186419233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186411810_186411894_186417543_186417655_186419008
transcript_91931.known	chr8	-	1348	9	FSM	ENSG00000179526.17	ENST00000398712.7	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_3	83.5434018938659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144099810	True	NA	-6	True	ATTAAA	-16	NA	144103773	144098636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_91932.nic	chr8	-	1514	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	182.891873794327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103639	True	NA	-6	True	ATTAAA	-16	NA	144104233	144098636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103846
transcript_91933.nic	chr8	-	1372	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	182.597533868889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144104001	False	NA	-6	True	ATTAAA	-16	NA	144104269	144098636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_91935.nic	chr8	-	1443	8	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_7	186.347491947442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144104001	False	NA	-6	True	ATTAAA	-16	NA	144104269	144098636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_144098789_144098865_144098995_144099080_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_91939.known	chr8	+	1712	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	19.5904345017394	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	144145330	True	NA	6	True	AATAAA	-17	NA	144148035	144213467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_91942.known	chr8	+	2134	13	FSM	ENSG00000185122.11	ENST00000528838.6	2134	13	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_9	85.0406765416801	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCATGTGTTTCC	144279576	True	NA	35	True	TATAAA	-17	NA	144291603	144314720	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_91946.known	chr8	+	1757	5	FSM	ENSG00000185803.12	ENST00000530047.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	201.695779579048	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	144356181	True	NA	26	True	AATAAA	-13	NA	144358556	144361270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144358611_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_91948.known	chr8	+	1777	5	FSM	ENSG00000185803.12	ENST00000402965.5	1777	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	240.807495730511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	144356205	True	NA	26	True	AATAAA	-13	NA	144358580	144361270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144358659_144359187_144359424_144359622_144360494_144360589_144360714_144360802
transcript_91949.known	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	55.2827956963104	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356237	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_9195.nnic	chr1	+	2792	15	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.7038589976252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	186374224	True	NA	NA	False	AATAAA	-20	NA	186375855	186421375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008_186419078_186420087
transcript_91954.known	chr8	+	1960	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	10.8984177844347	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373066	True	NA	NA	False	NA	NA	NA	144374046	144393242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_91955.nnic	chr8	+	1953	15	NNC	ENSG00000173137.12	novel	1960	15	NA	NA	-24	0	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_8	15.5407627265347	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373037	True	NA	NA	False	NA	NA	NA	144374017	144393242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391818_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_91959.known	chr8	+	2027	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	13.8739038161792	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373065	True	NA	NA	False	NA	NA	NA	144374045	144393242	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_9196.known	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	41.5777591889173	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	186374206	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_91963.known	chr8	-	668	4	FSM	ENSG00000147804.10	ENST00000532718.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144412872	True	NA	-5	True	AGTAAA	-19	NA	144413586	144412413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512
transcript_91964.known	chr8	-	498	3	FSM	ENSG00000147804.10	ENST00000530807.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	31.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144412855	True	NA	-5	True	AGTAAA	-19	NA	144413569	144412413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412667_144412758_144412947_144413512
transcript_91965.known	chr8	-	2778	3	FSM	ENSG00000147804.10	ENST00000529462.5	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACATGTTTCTGTGAG	-144412871	True	NA	NA	False	ATTAAA	-13	NA	144413585	144410394	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412947_144413236_144413390_144413512
transcript_91966.known	chr8	-	795	3	FSM	ENSG00000147804.10	ENST00000531013.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGCTGTGCTCTCCTT	-144412877	True	NA	-6	True	AGTAAA	-18	NA	144413591	144412414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412667_144412758_144412947_144413236
transcript_91967.known	chr8	-	2123	12	FSM	ENSG00000147804.10	ENST00000301305.8	2123	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	29.6815049405718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144416832	False	NA	-5	True	AGTAAA	-19	NA	144416844	144412413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512_144413568_144413749_144413882_144413957_144414096_144414261_144414435_144414724_144414897_144414973_144415111_144415226_144415420_144415809_144416092_144416597
transcript_91970.known	chr8	-	650	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	107.337474040213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTCGACCTGGAG	-144424480	True	NA	NA	False	NA	NA	NA	144428548	144423863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_91977.known	chr8	-	948	10	FSM	ENSG00000160948.14	ENST00000292510.6	948	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_9	55.0434172065814	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144424480	True	NA	-22	True	AATAAA	-18	NA	144428548	144423616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_9198.known	chr1	+	3754	13	FSM	ENSG00000157181.16	ENST00000367470.8	3754	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	55.2149209906163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAATTTTTAAATAAGG	186374206	True	NA	NA	False	AATAAA	-23	NA	186375837	186421378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_91988.known	chr8	-	573	9	FSM	ENSG00000160948.14	ENST00000531032.5	573	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_8	57.9459608169543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGCACCGCATGAGC	-144424475	True	NA	NA	False	NA	NA	NA	144428543	144424104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_9199.known	chr1	+	1900	13	FSM	ENSG00000157181.16	ENST00000419367.8	1900	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	53.8413306753175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGCTGG	186374206	True	NA	NA	False	NA	NA	NA	186375837	186419551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_92.known	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	1017.87261809456	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
transcript_92000.known	chr8	-	892	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_5	35.3022662162077	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144422915	False	NA	-22	True	AATAAA	-18	NA	144426983	144423616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_92001.known	chr8	-	1010	8	FSM	ENSG00000160948.14	ENST00000529182.5	1010	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	37.7132034476749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144422915	False	NA	-22	True	AATAAA	-18	NA	144426983	144423616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_92004.nnic	chr8	-	1734	3	NNC	ENSG00000187954.13	novel	907	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	98.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	-144462658	False	NA	0	True	AATAAA	-24	NA	144462877	144451119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_144452571_144453221_144453461_144462833
transcript_92005.known	chr8	-	1216	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	33	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACTGCCCATTTTT	-144464330	True	NA	-8	True	AATAAA	-21	NA	144465492	144463824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144464613_144464808_144465097_144465352
transcript_92006.known	chr8	-	581	3	FSM	ENSG00000187954.13	ENST00000530637.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	51	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGCTGCCACCACCA	-144465624	False	NA	NA	False	GGGGCT	-21	NA	144465667	144464577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144464613_144464808_144465097_144465409
transcript_92007.known	chr8	-	1162	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	47	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	-144465605	False	NA	0	True	AATAAA	-29	NA	144465648	144463816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144464613_144464808_144465097_144465570
transcript_92008.known	chr8	-	492	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	417.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCCAGTCCCCCGCCA	-144463736	True	NA	NA	False	NA	NA	NA	144475823	144474872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144475057_144475156_144475224_144475582
transcript_92010.known	chr8	-	2017	3	FSM	ENSG00000160973.8	ENST00000377317.5	2017	3	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	119	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCAGGGCCGCGACCCAG	-144463762	True	NA	NA	False	NA	NA	NA	144475849	144473411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144475057_144475156_144475262_144475582
transcript_92012.known	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	144500488	True	NA	18	True	GATAAA	-18	NA	144501088	144502120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144501295_144501519
transcript_92013.known	chr8	+	5337	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	74.7187318474349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	144516618	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
transcript_92017.nic	chr8	+	2115	4	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	75.19012937584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	144516606	True	NA	12	True	NA	NA	NA	144517979	144522024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910
transcript_92018.known	chr8	-	1637	4	FSM	ENSG00000213563.7	ENST00000534680.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	39.3474550920669	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	NA	False	NA	-39	True	NA	NA	NA	144529132	144526251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144526640_144526959_144527788_144528023_144528073_144528760
transcript_92019.known	chr8	-	2953	5	FSM	ENSG00000198169.9	ENST00000292562.12	2953	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	15.8804124631572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	-144755197	True	NA	-5	True	AATAAA	-20	NA	144755531	144720908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_92022.nnic	chr8	-	764	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-67	1543	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	23.8156986040721	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAATTCCATCCTTCT	-144755476	False	NA	NA	False	AATATA	-17	NA	144755598	144751910	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_92023.nnic	chr8	-	599	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-67	1378	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	23.8156986040721	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTCTTTTCTTCACTT	-144755476	False	NA	NA	False	AATACA	-15	NA	144755598	144752075	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_92025.known	chr8	-	618	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	17.1464281994822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGGTGATTTAC	-144755107	True	NA	1	True	AATATA	-22	NA	144755441	144753453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
transcript_92026.known	chr8	-	1901	6	FSM	ENSG00000196378.13	ENST00000343459.8	1901	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	34.3546212320846	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCATGTTCATTTTAG	-144787283	False	2180	-1	True	ATTAAA	-25	NA	144787304	144773113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_92027.known	chr8	-	582	5	FSM	ENSG00000196378.13	ENST00000534445.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	34.8209706929603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGAGCAAAGTTTTGAA	-144787324	False	2180	NA	False	NA	NA	NA	144787345	144774353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144774606_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_9203.known	chr1	+	2879	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.59642267473712	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	186828849	True	NA	NA	False	AATAAA	-20	NA	186828948	186988981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
transcript_9204.nic	chr1	+	1061	3	NIC	ENSG00000230426.5	novel	1142	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTGCTATATATATT	187641045	True	NA	NA	False	AATAAA	-15	NA	187641235	187686621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_187641270_187641375_187641482_187685700
transcript_9205.known	chr1	+	1157	2	FSM	ENSG00000230426.5	ENST00000662036.1	1157	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTGCTATATATATT	187641055	True	NA	NA	False	AATAAA	-15	NA	187641245	187686621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_187641482_187685700
transcript_92054.known	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_5	12049.3929042089	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615242	True	NA	-19	True	AATAAA	-17	NA	144792389	144789768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
transcript_92056.known	chr8	-	1041	6	FSM	ENSG00000161016.18	ENST00000262584.7	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	9348	junction_5	9970.84211087509	8840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGTGCCCACCCCC	-144792542	False	NA	-20	True	AATAAA	-16	NA	144792587	144789769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792365
transcript_92077.known	chr8	-	556	4	FSM	ENSG00000161016.18	ENST00000529163.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_3	15978.8128539708	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	-144615243	True	NA	-17	True	AATAAA	-19	NA	144792390	144789766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144792365
transcript_92078.known	chr8	-	717	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	17173	junction_2	10267.8600280465	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGCCCACCCCCAT	-144791914	False	NA	-18	True	AATAAA	-18	NA	144791959	144789767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
transcript_92079.known	chr8	-	745	5	FSM	ENSG00000161016.18	ENST00000532702.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	7806.62892595133	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACCCAGAAATGCA	-144615237	True	NA	NA	False	NA	NA	NA	144792384	144790354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792265
transcript_92080.nnic	chr8	+	568	5	NNC	ENSG00000197363.11	novel	3238	5	NA	NA	-23	-200	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2.38484800354236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTTCGTTTGTGAGT	144798429	False	NA	NA	False	AATAAA	-18	NA	144798852	144807127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_144798938_144802869_144802948_144803640_144803768_144804124_144804239_144806963
transcript_92081.known	chr8	+	546	5	FSM	ENSG00000147789.16	ENST00000529767.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	35.5457451743524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAAAGTGACAGGCTT	144824899	True	NA	NA	False	NA	NA	NA	144827576	144841524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144829426_144829605_144837390_144837508_144841354
transcript_92082.known	chr8	+	2794	5	FSM	ENSG00000147789.16	ENST00000446747.7	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	31.5386667441729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	144824881	True	NA	89	True	NA	NA	NA	144827558	144843772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144841354
transcript_92086.known	chr8	+	2738	5	FSM	ENSG00000147789.16	ENST00000527218.6	2738	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	33.176610737084	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	144824901	True	NA	89	True	NA	NA	NA	144827578	144843772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837393_144837508_144841354
transcript_92089.known	chr8	+	2125	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	36.8510515453766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	144824840	True	NA	22	True	AATAAA	-19	NA	144827517	144843222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
transcript_92093.known	chr8	+	855	4	FSM	ENSG00000147789.16	ENST00000532382.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	20.8859335970941	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGATTCTGAGG	144824877	True	NA	NA	False	NA	NA	NA	144827554	144841475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829605_144837390_144837508_144841354
transcript_92094.known	chr8	+	569	3	FSM	ENSG00000147789.16	ENST00000532393.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	43.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAATGCCAAAAAAAGTT	144824905	True	NA	NA	False	AATACA	-19	NA	144827582	144841782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144837393_144837508_144841354
transcript_92098.known	chr8	-	1305	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCGTGTGATGCAG	-144850459	True	NA	-4	True	AATAAA	-30	NA	144853067	144850165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852992
transcript_92099.known	chr8	-	1430	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCAGAGGATGGCG	-144850440	True	NA	-14	True	AATAAA	-20	NA	144853048	144850175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852838
transcript_921.known	chr1	+	2268	13	FSM	ENSG00000142657.21	ENST00000270776.13	2268	13	0	0	0	0	multi-exon	FALSE	canonical	2	1023	junction_6	184.027681341694	515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCTGATTTATTTCC	10377630	True	NA	18	True	ATTAAA	-18	NA	10399063	10420511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629
transcript_9210.known	chr1	+	472	2	FSM	ENSG00000237457.6	ENST00000436905.5	472	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAACAAGAATATTAATT	190478421	False	NA	33	True	AATAAA	-37	NA	190478550	190480735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_190478632_190480344
transcript_92100.known	chr8	-	848	2	FSM	ENSG00000170619.10	ENST00000533270.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCCGAGCGTCCTGAT	-144850395	True	NA	NA	False	NA	NA	NA	144853003	144850825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852725
transcript_92101.known	chr8	-	849	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGCGTCCTGATG	-144852636	False	2608	NA	False	NA	NA	NA	144852657	144850824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852379
transcript_92104.known	chr8	-	672	6	FSM	ENSG00000196150.14	ENST00000533622.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	24.8467301671669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCATGCCACTCACTCC	-144899303	True	NA	NA	False	NA	NA	NA	144901426	144882654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_92105.known	chr8	-	6337	6	FSM	ENSG00000196150.14	ENST00000417550.7	6337	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	16.4365446490435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTGCAGTGAAGAA	-144899330	True	NA	NA	False	AATAAA	-17	NA	144901453	144876954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_92106.known	chr8	-	6364	6	FSM	ENSG00000196150.14	ENST00000292579.11	6364	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	17.0950285170865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAGTGAAGAAAGAT	-144899338	True	NA	NA	False	AATAAA	-21	NA	144901461	144876950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890075_144890307_144890404_144901398
transcript_92107.known	chr8	-	593	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	27.9049726751344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGTGTGTTGAGTGT	-144899300	True	NA	NA	False	NA	NA	NA	144901423	144882605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_9211.known	chr1	+	526	2	FSM	ENSG00000237457.6	ENST00000424735.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAACAAGAATATTAATT	190478985	False	NA	33	True	AATAAA	-37	NA	190479005	190480735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_190479141_190480344
transcript_92110.nic	chr8	-	723	5	ISM	ENSG00000196150.14	ENST00000417550.7	6337	6	-22	9639	4	3093	5prime_fragment	FALSE	canonical	3	47	junction_4	12.6762573340872	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144899352	True	NA	-2	True	ATTAAA	-18	NA	144901475	144886593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_92112.nic	chr8	-	738	5	ISM	ENSG00000196150.14	ENST00000292579.11	6364	6	-14	9643	4	3093	5prime_fragment	FALSE	canonical	3	29	junction_3	17.2825779327044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144899352	True	NA	-2	True	ATTAAA	-18	NA	144901475	144886593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_144886903_144889580_144889695_144889932_144890075_144890307_144890404_144901398
transcript_92115.known	chr8	-	696	3	FSM	ENSG00000170631.15	ENST00000532351.5	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTATTCAGCGTCAA	-144949774	True	NA	NA	False	NA	NA	NA	144950819	144932122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144932591_144946010_144946216_144950796
transcript_92116.known	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-144949830	True	NA	NA	False	NA	NA	NA	144950875	144932404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144932591_144945912_144946216_144950796
transcript_92117.known	chr8	-	2206	2	FSM	ENSG00000170631.15	ENST00000527427.1	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAGAAAAA	-144949830	True	NA	NA	False	NA	NA	NA	144950875	144944088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144946216_144950796
transcript_92119.known	chr8	-	876	5	FSM	ENSG00000196922.11	ENST00000690545.1	2085	5	9	1200	0	-385	multi-exon	FALSE	canonical	3	14	junction_2	5.43139024560011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAAGAGCCTATCAGA	-145001757	True	NA	NA	False	NA	NA	NA	145002895	144978138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144978554_144994478_144994593_144996506_144996608_144999602_144999770_145002816
transcript_92120.known	chr8	-	599	4	FSM	ENSG00000196922.11	ENST00000528392.6	1980	4	17	1364	0	-561	multi-exon	FALSE	canonical	2	5	junction_2	9.28559218478941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCTCTAGAGAGAATGG	-145001757	True	NA	NA	False	NA	NA	NA	145002895	144978314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144978554_144994478_144994593_144999602_144999770_145002816
transcript_92123.known	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_2	190.129561089274	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
transcript_92125.known	chr8	+	2676	4	FSM	ENSG00000182307.14	ENST00000530455.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_1	197.924227925739	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_145052898_145053061_145053147_145053296_145053444_145054017
transcript_9213.known	chr1	+	522	1	FSM	ENSG00000231767.4	ENST00000647225.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATGACTTAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	192716131	192716653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_192716100_192716700
transcript_9214.known	chr1	+	1348	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	5.11737237261468	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	192807953	True	NA	14	True	AATAAA	-25	NA	192809038	192812275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
transcript_92143.known	chr9	-	1771	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_15	533.237591406391	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	NA	False	NA	NA	False	ATTAAA	-44	NA	179047	121059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_92149.known	chr9	-	1792	15	FSM	ENSG00000172785.18	ENST00000377400.8	1792	15	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_8	468.051829722011	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGATGTTGACGACC	NA	False	NA	NA	False	AATAAA	-17	NA	179147	121040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_92167.known	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	567.388401038597	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	-173519	True	NA	-6	True	AATAAA	-20	NA	179021	121408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_92181.known	chr9	-	1381	10	FSM	ENSG00000172785.18	ENST00000613988.4	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_9	422.887195652592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGTTCCTAAAACATC	NA	False	NA	NA	False	ATTAAA	-22	NA	179088	151576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_92183.known	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_3	703.347393224398	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	-173521	True	NA	NA	False	ATTAAA	-39	NA	179023	171952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_173367_175697_175785_177722_177821_178815
transcript_92184.known	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_1	2	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	NA	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_173367_175697_175785_178815
transcript_92185.nic	chr9	+	2672	10	ISM	ENSG00000107104.21	ENST00000382293.7	5249	11	6133	0	6133	0	3prime_fragment	FALSE	canonical	3	116	junction_3	19.7584174904873	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	713007	False	NA	14	True	AATAAA	-16	NA	713021	746103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_92187.nnic	chr9	+	787	5	NIC	ENSG00000107104.21	novel	2232	5	NA	NA	-44	57	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	12.9687123493429	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATCTTTTCTTATCT	469349	True	NA	14	True	AATAAA	-25	NA	470246	475522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_470375_470555_470683_471445_471587_473193_473274_475211
transcript_92189.nnic	chr9	+	708	5	NNC	ENSG00000107104.21	novel	2232	5	NA	NA	-44	57	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	16.0993012270719	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATCTTTTCTTATCT	469349	True	NA	14	True	AATAAA	-25	NA	470246	475522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_470375_470555_470683_471524_471587_473193_473274_475211
transcript_92191.nnic	chr9	+	646	4	NIC	ENSG00000107104.21	novel	5581	16	NA	NA	-44	57	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	15.542057635833	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATCTTTTCTTATCT	469349	True	NA	14	True	AATAAA	-25	NA	470246	475522	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_470375_470555_470683_473193_473274_475211
transcript_92192.nnic	chr9	+	642	4	NIC	ENSG00000107104.21	novel	5097	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	5.73488351136175	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACAGTTTTTTCCTT	502536	True	NA	NA	False	AATAAA	-17	NA	504732	549531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_504755_539515_539634_540507_540668_549189
transcript_92195.known	chr9	+	1781	7	FSM	ENSG00000080503.24	ENST00000324954.10	1781	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.6059888828115	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	2157659	False	NA	10	True	AATAAA	-18	NA	2157682	2193574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_2157891_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_92199.nnic	chr9	-	835	5	NNC	ENSG00000236404.12	novel	806	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	38.4967531098403	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621365	False	NA	0	True	AATAAA	-25	NA	2621397	2535651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_2536016_2536358_2536454_2539398_2539553_2593739_2593793_2621228
transcript_92203.nnic	chr9	-	1052	4	NNC	ENSG00000236404.12	novel	806	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	34.8361242901037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621156	True	NA	0	True	AATAAA	-25	NA	2621416	2535651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_2536016_2536358_2536454_2539147_2539553_2621228
transcript_92205.nic	chr9	-	854	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-48	0	-48	0	multi-exon	FALSE	canonical	3	57	junction_3	15.7480157480236	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621437	False	NA	0	True	AATAAA	-25	NA	2621469	2535651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
transcript_92206.nnic	chr9	-	830	4	NNC	ENSG00000236404.12	novel	746	4	NA	NA	368	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	35.1978534699048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621973	False	NA	0	True	AATAAA	-25	NA	2622005	2535651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_2536016_2536358_2536454_2539398_2539553_2621788
transcript_92207.known	chr9	-	887	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	32.124756808418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2622341	False	NA	0	True	AATAAA	-25	NA	2622373	2535651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
transcript_92216.known	chr9	-	2187	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_9	49.1366993693461	755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGTCTCCTCTGTT	-2821136	True	NA	-4	True	TATAAA	-30	NA	2844095	2804151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_9222.known	chr1	-	1346	12	FSM	ENSG00000116750.14	ENST00000367451.8	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	169.214373302717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATGAAAGTGATATTAA	-193050727	True	NA	-21	True	CATAAA	-38	NA	193059349	193016161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_9223.known	chr1	-	1355	12	FSM	ENSG00000116750.14	ENST00000367450.7	1355	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	174.000189987547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTTAGTTTTCTGGT	-193059182	False	NA	38	True	NA	NA	NA	193059296	193016102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92234.nnic	chr9	-	632	5	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	43	-8295	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	4.15331193145904	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	NA	False	NA	NA	False	AATAAA	-21	NA	4666623	4654593	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4666211_4666257_4666434
transcript_92238.known	chr9	+	2965	1	FSM	ENSG00000205808.7	ENST00000381883.5	2965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGATGAAAACTTG	4661133	True	NA	14	True	AATAAA	-20	NA	4662293	4665258	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4662300_4665300
transcript_9224.nic	chr1	-	1863	12	NIC	ENSG00000116750.14	novel	1346	12	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	157.121156599739	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCAAGTGTTTGGGG	-193059355	False	NA	NA	False	AATAAA	-24	NA	193059469	193015758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92243.nnic	chr9	-	454	3	NNC	ENSG00000273061.2	novel	256	2	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-4679346	True	NA	-10	True	AATAAA	-15	NA	4679530	4676599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_4676750_4679005_4679166_4679386
transcript_92245.known	chr9	-	235	2	FSM	ENSG00000273061.2	ENST00000609131.2	256	2	21	0	21	0	multi-exon	FALSE	canonical	3	26	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-4679287	True	NA	-10	True	AATAAA	-15	NA	4679471	4676599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4676750_4679386
transcript_92246.known	chr9	-	463	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATGTGTTTAGA	-4679318	True	NA	NA	False	AATAAA	-16	NA	4679502	4678818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4679166_4679386
transcript_92247.known	chr9	+	3500	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	18.3484785926972	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	4675693	True	NA	5	True	AATAAA	-18	NA	4679568	4708399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
transcript_92251.known	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	32.8176781628439	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-4738989	True	NA	-2	True	AATAAA	-21	NA	4741202	4709555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
transcript_92256.known	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_1	16.4083629591742	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	4790234	True	NA	75	True	ATTAAA	-17	NA	4792943	4861066	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_92258.known	chr9	+	1644	8	FSM	ENSG00000120158.12	ENST00000442869.5	1644	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	41.9411638428143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATGTGAGGGAT	4790270	True	NA	NA	False	NA	NA	NA	4792979	4860861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4793228_4823547_4823620_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_92259.nic	chr9	-	836	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	176	-106	176	94	3prime_fragment	FALSE	canonical	3	59	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATACGTAGTAACAATACA	NA	False	NA	94	True	AATAAA	-17	NA	5304256	5299769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_5300445_5304095
transcript_9226.nic	chr1	-	1780	12	NIC	ENSG00000116750.14	novel	1355	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	163.037642056283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCAAGTGTTTGGGG	-193050761	True	NA	NA	False	AATAAA	-24	NA	193059383	193015758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92260.nic	chr9	-	730	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	176	0	176	0	3prime_fragment	FALSE	canonical	3	59	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAAAAGCCTTTTT	NA	False	NA	-12	True	ATTAAA	-11	NA	5304256	5299875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_5300445_5304095
transcript_92261.nic	chr9	-	485	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	176	245	176	-245	3prime_fragment	FALSE	canonical	3	59	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTGCTAGATTTTGC	NA	False	NA	-1	True	AATAAA	-26	NA	5304256	5300120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_5300445_5304095
transcript_92262.nnic	chr9	-	400	3	NNC	ENSG00000107018.8	novel	764	2	NA	NA	53	26849	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCCAAATCTCAATGAAA	-5339326	False	NA	-6	True	AATAAA	-19	NA	5339343	5308080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_5308269_5335467_5335598_5339261
transcript_92265.known	chr9	-	764	2	FSM	ENSG00000107018.8	ENST00000487557.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCATACATAATAACAATA	-5339379	True	NA	NA	False	AATAAA	-15	NA	5339396	5334968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_5335598_5339261
transcript_92270.known	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	41.5384159543909	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435087	True	NA	-2	True	AATAAA	-20	NA	5437925	5357970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
transcript_92274.nnic	chr9	-	945	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	144.710918731103	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435138	True	NA	-2	True	AATAAA	-20	NA	5437976	5357970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
transcript_92281.known	chr9	-	1000	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGGAATATACAGAACAA	-6013417	True	NA	NA	False	NA	NA	NA	6015612	6013497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_6014357_6015471
transcript_92282.known	chr9	-	3843	25	FSM	ENSG00000178445.10	ENST00000321612.8	3843	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	245.695833721969	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCTTGGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	6645729	6532466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244
transcript_92285.nnic	chr9	+	776	3	NNC	ENSG00000236924.2	novel	906	3	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	44	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATACTGTGTTTT	6643530	True	NA	6	True	AATACA	-19	NA	6645826	6670330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_6646086_6669543_6669729_6669998
transcript_92286.known	chr9	+	526	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	135	245	81	-245	multi-exon	FALSE	canonical	3	66	junction_2	14.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	6643659	True	NA	16	True	AATAAA	-16	NA	6645955	6670635	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6646086_6669543_6669729_6670424
transcript_92290.nic	chr9	+	1046	2	FSM	ENSG00000236924.2	ENST00000688297.1	1035	2	-15	4	6	-4	multi-exon	FALSE	canonical	3	95	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATACTGTGTTTT	6643530	True	NA	6	True	AATACA	-19	NA	6645826	6670330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6646086_6669543
transcript_92291.known	chr9	+	475	3	FSM	ENSG00000229611.2	ENST00000412339.2	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGGTAATTTTTGTAT	6704268	True	NA	NA	False	AATAAA	-19	NA	6704331	6707780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6704367_6704452_6704654_6707541
transcript_92295.known	chr9	+	1439	8	FSM	ENSG00000107077.19	ENST00000489243.5	1439	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	8.88015443881146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTAGCAAGAGATGG	6757463	False	NA	NA	False	AAAACA	-27	NA	6758102	6893632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094
transcript_92297.known	chr9	+	1406	4	FSM	ENSG00000107077.19	ENST00000401787.7	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	11.8977121983832	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATATTGTCCTTTT	6757317	True	NA	NA	False	ATTAAA	-18	NA	6757653	6815149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630
transcript_92304.known	chr9	-	2456	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_1	0	1371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCAAAGTGTGTTTGG	-7788888	True	NA	NA	False	AATAAA	-20	NA	7799778	7796499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_7798638_7799460
transcript_92307.known	chr9	+	2683	2	FSM	ENSG00000153714.6	ENST00000319264.4	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCACTGATCTTTTC	12774970	True	NA	NA	False	ATTAAA	-16	NA	12775019	12823060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_12776028_12821385
transcript_92308.nnic	chr9	+	2223	4	Antisense	novelGene_ENSG00000214121.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_3	10.9645894689324	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAATTGTCTATTCTTGC	NA	False	NA	9	True	ATTAAA	-19	NA	12948540	12974182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr9_+_12948974_12958413_12958491_12961288_12961385_12972565
transcript_92315.known	chr9	-	9121	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	13.5646599662505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-14693319	False	NA	0	True	AATAAA	-18	NA	14693432	14611070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_92320.known	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	-14722391	True	NA	NA	False	NA	NA	NA	14722733	14719723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14720387_14722165
transcript_92324.known	chr9	-	998	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGATGTCATATCA	NA	False	NA	NA	False	AAAAAG	-15	NA	14922334	14921336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14921300_14922300
transcript_92326.nnic	chr9	+	747	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	7.66077672302228	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTCTGCCTGGTTTTC	14993165	True	NA	18	True	AATAAA	-23	NA	14993279	15019729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_14993350_14997163_14997324_15001633_15001733_15017354_15017528_15019484
transcript_92328.known	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	6.03360854986168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-10	True	AATAAA	-16	NA	15307360	15163621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_92337.known	chr9	-	900	4	FSM	ENSG00000155158.20	ENST00000506891.1	900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.4419672692682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATATAATTTGGCTAC	-15306033	True	NA	NA	False	AATAAA	-18	NA	15307209	15249041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_15249688_15249917_15250011_15267913_15267949_15307083
transcript_92339.known	chr9	+	2453	12	FSM	ENSG00000164975.16	ENST00000610884.4	2453	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	141.946736605876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCCCTTTCCATCATT	NA	False	NA	NA	False	NA	NA	NA	15422733	15465832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630_15461806_15462864_15462991_15465509
transcript_92341.known	chr9	+	2524	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	74.8242384970717	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	15415733	True	NA	9	True	TATAAA	-16	NA	15422868	15462460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
transcript_92345.known	chr9	-	1664	10	FSM	ENSG00000164985.15	ENST00000397519.6	1664	10	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	625.792830469211	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	-15510274	False	NA	-14	True	AATAAA	-10	NA	15510289	15470645	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_15471232_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116
transcript_92346.known	chr9	+	5680	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-172	-2508	-30	1674	multi-exon	TRUE	canonical	3	322	junction_4	16.5184555876147	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	15422703	15464134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
transcript_92364.nic	chr9	+	569	2	NIC	ENSG00000234779.1	novel	428	3	NA	NA	-66	0	intron_retention	FALSE	canonical	3	32	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	NA	False	NA	4	True	AATAAA	-17	NA	16726747	16727524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_16727107_16727314
transcript_9237.known	chr1	-	1534	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	158.620447234875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050739	True	NA	NA	False	AATAAA	-20	NA	193059361	193018404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92370.known	chr9	+	4871	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.2799779361785	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	17132850	True	NA	23	True	AATAAA	-35	NA	17135039	17302051	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_92373.nic	chr9	+	1132	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-7	65213	-7	-65213	5prime_fragment	FALSE	canonical	3	69	junction_4	22.6315598225133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTTCAAATAACATAT	17132843	True	NA	NA	False	AATAAA	-24	NA	17135032	17236838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_92374.nic	chr9	+	2528	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-7	63817	-7	-63817	5prime_fragment	FALSE	canonical	3	69	junction_4	22.6315598225133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAATTTTGGTAGTC	17132843	True	NA	NA	False	AATAAA	-20	NA	17135032	17238234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_92375.known	chr9	+	2272	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTCATGCTGATTCTG	17132792	True	NA	0	True	AATAAA	-8	NA	17134981	17168556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_17135426_17143287_17143377_17166817
transcript_92377.known	chr9	+	824	4	FSM	ENSG00000178031.18	ENST00000431052.6	824	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTATGTACTAGACT	18473949	True	NA	NA	False	AATAAA	-18	NA	18474143	18574527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029
transcript_92379.known	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	19044253	True	NA	10	True	AATAAA	-19	NA	19049426	19051025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_19049400_19051000
transcript_92380.known	chr9	-	6323	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_2	76.3611638449153	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAATTTCCTATA	-19094240	True	NA	-4	True	AATAAA	-15	NA	19102904	19053140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_92381.nic	chr9	-	1776	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-48	10021	-48	-4398	5prime_fragment	FALSE	canonical	3	248	junction_9	25.3255723604545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAATTTCTAAGAAAA	-19094288	True	NA	NA	False	AAGAAA	-5	NA	19102952	19063161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_92382.nic	chr9	-	1492	9	NIC	ENSG00000147872.10	novel	1897	8	NA	NA	-24	-204	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	90.9586959833968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAATTTGTATTACATTAA	-19125215	True	NA	NA	False	AATAAA	-21	NA	19127516	19108578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_19108748_19116358_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_92384.known	chr9	-	1897	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	30.358403335176	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTTGTTCCATATG	-19125191	True	NA	-17	True	AATAAA	-25	NA	19127492	19115760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_92403.known	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	23091	junction_5	2518.69100923476	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-19113371	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
transcript_92404.known	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24266	junction_1	2325.39893082886	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	-19113341	True	NA	-37	True	AATAAA	-2	NA	19380206	19376269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
transcript_92405.nnic	chr9	+	435	3	NNC	ENSG00000286685.2	novel	243	2	NA	NA	-35	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	0.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAAGAATTTATTTTT	19789095	True	NA	NA	False	AATAAA	-22	NA	19789123	19791060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_19789279_19789605_19789750_19790924
transcript_92406.known	chr9	-	6724	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	7.68700201639105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAATTGGATGTGATG	-20621841	True	NA	NA	False	AATAAA	-23	NA	20622499	20341668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_92407.nic	chr9	-	1205	5	ISM	ENSG00000171843.17	ENST00000380338.9	6724	11	-70	72285	-70	-51249	5prime_fragment	FALSE	canonical	3	19	junction_1	6.41774882649672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGAGTAGCTCAGAG	-20621911	False	NA	NA	False	AGTAAA	-44	NA	20622569	20413953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_92409.nnic	chr9	+	585	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	-8	-96203	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	8	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAGTTGTAAAAGTTT	20656359	True	NA	18	True	AATAAA	-26	NA	20658300	20673909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_20658460_20658690_20658827_20673619
transcript_92411.nnic	chr9	+	806	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	2	-96203	intron_retention	FALSE	canonical	3	27	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAGTTGTAAAAGTTT	20656369	True	NA	18	True	AATAAA	-26	NA	20658310	20673909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_20658827_20673619
transcript_92414.known	chr9	-	8277	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.30761599444003	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	-21031364	True	NA	NA	False	AATAAA	-26	NA	21031640	20999508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_92426.known	chr9	+	6032	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	0	0	0	0	multi-exon	TRUE	canonical	3	294	junction_1	15.8655061600406	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTATTTTTATTTT	21795427	True	NA	6	True	ATTAAA	-17	NA	21802635	21867081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_92438.known	chr9	+	1309	8	FSM	ENSG00000099810.21	ENST00000580718.1	1309	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	110.940138298608	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTGGTTATTTA	21795453	True	NA	57	True	AAGAAA	-1	NA	21802661	21862367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859285_21859426_21861975
transcript_92439.known	chr9	+	2241	8	FSM	ENSG00000099810.21	ENST00000419385.5	2241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.037592457579	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTATTGTTATTT	21795448	True	NA	5	True	AATAAA	-21	NA	21802656	21863286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432_21815545_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_92440.known	chr9	+	310	2	FSM	ENSG00000099810.21	ENST00000580675.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTTTGGCAGCC	21795438	True	NA	NA	False	ATTAAA	-15	NA	21802646	21815607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432
transcript_92441.known	chr9	+	5586	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	22446583	True	NA	10	True	AATAAA	-14	NA	22446823	22455740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_22447733_22451063
transcript_92442.known	chr9	-	3983	7	FSM	ENSG00000107105.15	ENST00000397312.7	3983	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.1179165125163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23825727	True	NA	-7	True	AATAAA	-17	NA	23826240	23690103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23825805
transcript_92443.known	chr9	-	3763	6	FSM	ENSG00000107105.15	ENST00000223951.10	3763	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	42.1122310024059	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23820967	False	NA	-7	True	AATAAA	-17	NA	23821480	23690103	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
transcript_92447.nic	chr9	-	2830	5	ISM	ENSG00000107105.15	ENST00000397312.7	3983	7	-125	9733	-28	1578	5prime_fragment	FALSE	canonical	3	21	junction_4	45.0964244702393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23825852	True	NA	NA	False	ATTAAA	-14	NA	23826365	23699836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23825805
transcript_92448.known	chr9	-	1532	6	FSM	ENSG00000120159.13	ENST00000625311.1	1532	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	130.176802849048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTTTTAACTATGTAG	-26887553	False	NA	NA	False	ATTAAA	-18	NA	26892442	26841735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892258
transcript_92449.known	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	31.2512399753994	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-26887913	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_92463.known	chr9	+	2163	20	FSM	ENSG00000096872.17	ENST00000443698.5	2163	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	36.8318782797963	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	26947285	False	NA	8	True	AATAAA	-14	NA	26947311	27062925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_26947464_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_92467.known	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	14.2712154362444	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	26954224	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_92471.nic	chr9	+	2001	19	NIC	ENSG00000096872.17	novel	652	7	NA	NA	-21	-67	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.9261932025186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACTTTTGGAGTTTACC	26976475	True	NA	NA	False	NA	NA	NA	26976545	27062817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_26976783_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_92473.known	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	41.5384615384615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	26954291	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
transcript_92475.nnic	chr9	+	1376	13	NNC	ENSG00000096872.17	novel	1462	14	NA	NA	4	-16518	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_12	43.7234840281005	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTAGTATCAGCTGAAT	26954228	True	NA	NA	False	ATTAAA	-14	NA	26956415	27020282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27020000
transcript_92480.known	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	276	junction_4	40.6137820196646	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	-26941386	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92485.nic	chr9	-	2886	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	-203	539	combination_of_known_junctions	FALSE	canonical	3	184	junction_4	60.3880966931582	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGAGATTTTCCTGT	-26947215	True	NA	-10	True	AATAAA	-15	NA	26947445	26905343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92486.known	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	40.4793328612131	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	-26941377	True	NA	2	True	AATAAA	-23	NA	26947233	26907802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92487.nic	chr9	-	2184	12	NIC	ENSG00000137055.15	novel	2041	13	NA	NA	-203	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_3	61.9678669063703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	-26947215	True	NA	2	True	AATAAA	-23	NA	26947445	26907802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92489.known	chr9	-	405	2	FSM	ENSG00000234676.1	ENST00000456198.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCCAATCTTCAT	-26956281	False	14	NA	False	AATAAA	-16	NA	26956295	26955779	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26956016_26956126
transcript_92490.known	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	9.62635271879577	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-27525397	True	NA	-2	True	AATAAA	-17	NA	27529814	27325208	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
transcript_92492.known	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_10	25.7699437329615	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-27571787	True	NA	-2	True	AATAAA	-17	NA	27573481	27546545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_92493.known	chr9	-	3338	11	FSM	ENSG00000147894.17	ENST00000619707.5	3338	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	58.2480900974444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	NA	False	NA	-2	True	AATAAA	-17	NA	27573866	27546545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573708
transcript_92499.known	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_5	45.4502750266706	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	32379519	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_9250.known	chr1	-	5184	11	FSM	ENSG00000116750.14	ENST00000367454.6	5184	11	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_3	73.733642253723	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTCTCATGTAGGTGTA	-193050738	True	NA	-7	True	AATAAA	-17	NA	193059360	193012253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92502.known	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	28.535899808043	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-32525534	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
transcript_92506.known	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2698	junction_1	181.715895470558	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-32560374	True	NA	NA	False	AATAAA	-14	NA	32573159	32553000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
transcript_92507.known	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	24.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	-32550338	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32544327_32550773_32550969_32552433
transcript_92510.known	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1483.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-32560374	True	NA	22	True	NA	NA	NA	32573159	32553650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32553945_32570959_32571053_32572880
transcript_92511.known	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1302.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-32560399	True	NA	-11	True	AATAAA	-8	NA	32573184	32553532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32553945_32558909_32558955_32572880
transcript_92514.known	chr9	-	3621	2	FSM	ENSG00000197579.8	ENST00000379858.1	3621	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTGTATTCAACAAAAG	-32550305	True	NA	31	True	AGTAAA	-3	NA	32552553	32540825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32544327_32552433
transcript_92516.known	chr9	+	668	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTTTTGCATTATCCT	32550884	True	NA	14	True	AATAAA	-23	NA	32552344	32553012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_32552300_32553000
transcript_9253.known	chr1	-	5327	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	91.4625606464197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATGTAGGTGTATTTT	-193059382	False	NA	-3	True	AATAAA	-21	NA	193059496	193012249	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92535.nic	chr9	-	1875	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-38	86015	-5	0	5prime_fragment	FALSE	canonical	3	94	junction_5	93.289761452352	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997761	True	NA	-9	True	AATAAA	-14	NA	33001646	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_92536.known	chr9	-	2101	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	123.716100283624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-33024080	True	NA	-30	True	AAAAAG	-32	NA	33025130	32972636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
transcript_92537.known	chr9	-	1814	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	143.319679780011	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTTTTTCCCTGAGA	-33024015	True	NA	-47	True	AAAAAG	-15	NA	33025065	32972653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
transcript_92538.known	chr9	-	1031	8	FSM	ENSG00000137074.20	ENST00000477119.2	1031	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	136.213517864343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTATTCTGGGTTGCTT	-32997692	True	NA	-76	True	NA	NA	NA	33001577	32973444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987730_32988082_32988130_32989758_32989896_33001515
transcript_92539.nic	chr9	-	1880	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_5	93.0413557379245	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997761	True	NA	-9	True	AATAAA	-14	NA	33001646	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001566
transcript_92542.known	chr9	-	2099	8	FSM	ENSG00000137074.20	ENST00000494649.5	2099	8	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_7	109.197630235182	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997636	True	NA	-9	True	AATAAA	-14	NA	33001521	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001332
transcript_92544.nic	chr9	-	1990	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_6	71.0914903487049	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997761	True	NA	-9	True	AATAAA	-14	NA	33001646	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_92549.nic	chr9	-	1995	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_6	70.695957220671	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997761	True	NA	-9	True	AATAAA	-14	NA	33001646	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001566
transcript_92568.nic	chr9	-	1115	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-38	86775	-5	0	5prime_fragment	FALSE	canonical	3	94	junction_5	93.289761452352	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997761	True	NA	-7	True	ATTAAA	-21	NA	33001646	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_92571.nic	chr9	-	1120	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_5	93.0413557379245	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997761	True	NA	-7	True	ATTAAA	-21	NA	33001646	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001566
transcript_92577.nic	chr9	-	1230	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_6	71.0914903487049	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997761	True	NA	-7	True	ATTAAA	-21	NA	33001646	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_92580.nic	chr9	-	1259	8	NIC	ENSG00000137074.20	novel	1345	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	106.443623096732	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997734	True	NA	-7	True	ATTAAA	-21	NA	33001619	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001515
transcript_92581.nic	chr9	-	1235	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_6	70.695957220671	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997761	True	NA	-7	True	ATTAAA	-21	NA	33001646	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001566
transcript_92593.known	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	138.950130942324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	-32997710	True	NA	44	True	NA	NA	NA	33001595	32972706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
transcript_92594.known	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	112.724837054169	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997756	True	NA	-7	True	ATTAAA	-21	NA	33001641	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_92596.known	chr9	-	1962	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	142.285413478996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-32997728	True	NA	-13	True	AATAAA	-10	NA	33001613	32972619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
transcript_92597.nic	chr9	-	1948	7	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	117.319601469187	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997761	True	NA	-9	True	AATAAA	-14	NA	33001646	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001566
transcript_92620.known	chr9	-	1846	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	145.419699108783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTATTCAGTTGTTT	-33024068	True	NA	-12	True	AATAAA	-11	NA	33025118	32972618	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
transcript_92622.known	chr9	-	2032	7	FSM	ENSG00000137074.20	ENST00000672286.1	2032	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	72.3642407086078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGTAGGTGGAAACT	-32997702	True	NA	-5	True	AATAAA	-22	NA	33001587	32972755	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32988130_32989758_32989896_33001566
transcript_92637.known	chr9	-	2728	6	FSM	ENSG00000137074.20	ENST00000672244.1	2728	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	125.187219794993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGTGAGACCC	-32997717	True	NA	NA	False	NA	NA	NA	33001602	32971449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_92638.known	chr9	-	1394	5	FSM	ENSG00000137074.20	ENST00000673598.1	1394	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	143.991970262234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTACTTTCTTTTTC	-32997692	True	NA	-54	True	AAAAAG	-8	NA	33001577	32972660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_33001566
transcript_92640.known	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.262074932528	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997743	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_92641.known	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.751063318299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-32997743	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_92642.known	chr9	-	2057	9	FSM	ENSG00000137074.20	ENST00000479656.6	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	127.371933230991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTATTCAGTTG	-32997728	True	NA	-15	True	AATAAA	-8	NA	33001613	32972621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_32997242_32997349_33001566
transcript_92643.known	chr9	-	1914	9	FSM	ENSG00000137074.20	ENST00000465003.6	1914	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	133.762324198558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-32997698	True	NA	-13	True	AATAAA	-10	NA	33001583	32972619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_32997242_32997349_33001566
transcript_92644.known	chr9	-	1805	7	FSM	ENSG00000137074.20	ENST00000672438.1	1805	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	155.739543968626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTCCCTGAGAATA	-32997743	True	NA	-44	True	AAAAAG	-18	NA	33001628	32972650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_33001566
transcript_92645.known	chr9	-	1345	8	FSM	ENSG00000137074.20	ENST00000463596.6	1345	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	139.478474676056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997637	True	NA	-7	True	ATTAAA	-21	NA	33001522	32973375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001332
transcript_92648.known	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_5	122.308779325116	1582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	32987745	True	NA	14	True	AATATA	-22	NA	33025272	33039907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
transcript_92665.known	chr9	-	7136	12	FSM	ENSG00000122692.9	ENST00000397149.4	7136	12	0	0	0	0	multi-exon	TRUE	canonical	3	498	junction_6	41.720042946659	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCCTTTTAATGGCTGT	-33058076	True	NA	85	True	AGTAAA	-30	NA	33076674	33041764	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33047392_33048105_33048259_33053122_33053291_33056112_33056240_33056836_33056965_33057597_33057715_33060464_33060585_33062048_33062178_33068823_33068935_33071739_33071893_33073595_33073807_33076582
transcript_92679.known	chr9	+	3752	4	FSM	ENSG00000233554.6	ENST00000654325.1	3752	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAAATAGTGTAAGTC	33166937	True	NA	NA	False	AATATA	-7	NA	33166947	33182865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33167047_33177419_33177470_33178895_33178958_33179324
transcript_92680.known	chr9	-	1128	7	FSM	ENSG00000107262.26	ENST00000379704.7	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	445	junction_6	25.4389246802786	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTCTCTGTGGTTGT	-33258149	False	NA	-10	True	AGTAAA	-18	NA	33264571	33255025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
transcript_92685.known	chr9	+	1901	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_1	55.8120022202817	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGAAGTCTCTGTA	33252155	True	NA	NA	False	AATAAA	-16	NA	33265048	33282070	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
transcript_92693.known	chr9	+	1957	7	FSM	ENSG00000086065.14	ENST00000419016.6	1957	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	319.747122304834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTAGAAGTCTCTGT	33264848	False	NA	NA	False	AATAAA	-15	NA	33264878	33282069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33280808
transcript_92696.known	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_15	22.4267697183522	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	33286906	True	NA	15	True	AATAAA	-15	NA	33290544	33348723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
transcript_92697.known	chr9	-	1825	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	2.33238075793812	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	-33447118	True	NA	-13	True	AATAAA	-19	NA	33447593	33441159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
transcript_92698.known	chr9	-	2190	6	FSM	ENSG00000165271.17	ENST00000379470.5	2190	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	12.936769303037	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCCGTATTCCTGGCC	-33460174	False	NA	-11	True	AATAAA	-17	NA	33465194	33461451	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878
transcript_92699.nic	chr9	+	1771	9	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-454	31786	-454	1669	5prime_fragment	FALSE	canonical	3	11	junction_6	3.89711431702997	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	33523532	True	NA	NA	False	AAAAAG	-45	NA	33523796	33541227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_92701.known	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_4	31.2999600638723	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	33816739	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_92703.known	chr9	+	804	5	FSM	ENSG00000010438.17	ENST00000361005.10	804	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.12132034355964	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTCTGTGCCGGCTC	33750601	True	NA	16	True	AATAAA	-16	NA	33750678	33799231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33750728_33796642_33796803_33797828_33798083_33798485_33798623_33799027
transcript_92706.nic	chr9	-	437	5	ISM	ENSG00000137073.24	ENST00000683084.1	4165	25	0	67201	0	5399	5prime_fragment	FALSE	canonical	3	197	junction_4	24.4169510791171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATTCAGAAAACAAAGA	-34043835	True	NA	-59	True	AAAAAG	-13	NA	34048887	33989081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_92708.known	chr9	-	3460	25	FSM	ENSG00000137073.24	ENST00000629575.2	3460	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	81.8883788899391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAGGCTGTTTGGGTAT	-34043835	True	NA	-67	True	NA	NA	NA	34048887	33922140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34048824
transcript_92709.known	chr9	-	3592	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_7	23.576670142325	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTGAGTGAGTATT	-34123481	True	NA	-3	True	AATAAA	-16	NA	34126698	34086386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
transcript_92714.known	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	37.9286611065212	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	34173629	True	NA	9	True	AATAAA	-14	NA	34179042	34252523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_92723.known	chr9	+	2029	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	101.749889434829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	34173591	True	NA	74	True	NA	NA	NA	34179004	34251850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_92725.known	chr9	+	998	5	FSM	ENSG00000164978.18	ENST00000379158.7	998	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.0936282465479	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCTTCTAACCTGTT	34327712	True	NA	23	True	AATAAA	-16	NA	34329568	34343699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34329600_34336228_34336342_34338712_34338848_34339023_34339167_34343123
transcript_92726.known	chr9	+	960	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	13.0979218029257	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
transcript_92727.known	chr9	+	825	3	FSM	ENSG00000164978.18	ENST00000618590.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	41.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34329600_34339023_34339167_34343123
transcript_92728.known	chr9	-	6447	2	FSM	ENSG00000164976.9	ENST00000297625.8	6447	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTTTTATTGATTAA	-34375836	True	NA	NA	False	AATAAA	-21	NA	34376898	34366665	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34373007_34376792
transcript_92730.known	chr9	-	712	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11.2644968324772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381446	True	NA	2	True	AATAAA	-20	NA	34381600	34379018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
transcript_92731.nnic	chr9	-	717	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	728	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34380649	False	154	2	True	AATAAA	-20	NA	34380803	34379018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_34379182_34379645_34379733_34380336
transcript_92732.known	chr9	-	293	2	FSM	ENSG00000164972.14	ENST00000481295.5	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34379621	False	154	2	True	AATAAA	-20	NA	34379775	34379018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34379182_34379645
transcript_92733.known	chr9	-	596	5	FSM	ENSG00000164972.14	ENST00000379127.1	596	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	11.9451873154003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381406	True	NA	2	True	AATAAA	-20	NA	34381560	34379018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34379182_34379645_34379733_34380896_34381132_34381368_34381445_34381525
transcript_92738.known	chr9	-	1028	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGAGGTTTTCTTCTCTT	-34521325	True	NA	-5	True	AATAAA	-17	NA	34522990	34521042	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34521857_34522776
transcript_92740.known	chr9	-	1092	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTGCTATGTGGAG	-34608414	False	3690	-1	True	AATAAA	-26	NA	34612104	34610485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34611333_34611859
transcript_92741.known	chr9	-	872	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTACTCAGCCTGC	-34608407	False	3690	-10	True	AATAAA	-17	NA	34612097	34610494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34611333_34612063
transcript_92743.known	chr9	-	828	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_6	12.495554765151	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGTGCTGGCTTCTTGG	-34616805	True	NA	1	True	AATAAA	-18	NA	34620495	34613545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_92745.known	chr9	-	899	7	FSM	ENSG00000137100.16	ENST00000341694.6	899	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	101.725802473556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGAGTGTGCTGGCTT	-34616784	True	NA	-4	True	AATAAA	-13	NA	34620474	34613550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34613872_34614041_34614199_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_92747.known	chr9	-	687	6	FSM	ENSG00000137100.16	ENST00000421919.5	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	107.792393052571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGAGTGTGCTGGCTT	-34616753	False	NA	-4	True	AATAAA	-13	NA	34620443	34613550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34617884_34617972_34618675_34618761_34620368
transcript_92748.known	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1026	junction_2	163.399986400108	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628369	True	NA	-16	True	AATAAA	-20	NA	34637787	34634721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
transcript_92749.known	chr9	-	1582	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	593.95529199502	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628326	True	NA	-16	True	AATAAA	-20	NA	34637744	34634721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
transcript_92750.known	chr9	-	1842	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGATCTGTTCCATCT	NA	False	NA	-33	True	AATAAA	-3	NA	34637844	34634738	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34635859_34636996_34637421_34637546
transcript_92751.known	chr9	+	1722	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	6.75102872819313	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCCAATGCTGCTTT	34651960	True	NA	29	True	AATAAA	-37	NA	34652184	34661902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_92757.known	chr9	+	1756	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	23.5034040087814	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	34643646	True	NA	NA	False	GGGGCT	-7	NA	34646674	34651035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_92759.nnic	chr9	+	1356	11	NNC	ENSG00000213930.12	novel	1756	11	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	82.6559132790873	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATACTCTAATATCAGA	34643582	True	NA	14	True	AATAAA	-22	NA	34646610	34650583	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649421_34649565_34650368
transcript_9276.known	chr1	-	1507	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	133.04469173928	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193059295	False	NA	NA	False	AATAAA	-20	NA	193059409	193018404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_92777.known	chr9	+	1164	9	FSM	ENSG00000213930.12	ENST00000554550.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	96.1193919040274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAATTTGGGCAGATA	34643607	True	NA	-40	True	NA	NA	NA	34646635	34650529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_92787.known	chr9	+	1712	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	22.2948699141707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	34643652	True	NA	-20	True	NA	NA	NA	34646680	34650549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_92793.nnic	chr9	+	785	4	NNC	ENSG00000230074.4	novel	1410	3	NA	NA	0	1036	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTCTTCCTTACCT	34665159	True	NA	NA	False	AATAAA	-4	NA	34665614	34683017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_34665768_34678095_34678269_34680905_34681218_34682870
transcript_92794.nnic	chr9	+	834	4	Fusion	ENSG00000230074.4_ENSG00000288583.1	novel	1410	3	NA	NA	0	2066	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTCTCGTTTA	34665159	True	NA	NA	False	AATAAA	-17	NA	34665614	34776532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr9_+_34665768_34680905_34681218_34702953_34703039_34776248
transcript_92796.known	chr9	-	338	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	30.092450142113	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-34664410	True	NA	-17	True	ATTAAA	-10	NA	34666028	34665031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
transcript_92798.nnic	chr9	-	523	4	NNC	ENSG00000187186.15	novel	338	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	107.889861535838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-34664432	True	NA	-17	True	ATTAAA	-10	NA	34666050	34665031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_34665191_34665313_34665374_34665612_34665844_34665977
transcript_92799.known	chr9	+	1410	3	FSM	ENSG00000230074.4	ENST00000654838.1	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTTTTTGAGGCAG	34665151	True	NA	NA	False	AAAAAG	-26	NA	34665606	34681981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34665768_34678095_34678269_34680905
transcript_92801.known	chr9	-	465	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	35	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	-34664410	True	NA	-13	True	ATTAAA	-14	NA	34666028	34665027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34665374_34665612_34665681_34665977
transcript_92802.known	chr9	-	477	3	FSM	ENSG00000187186.15	ENST00000423809.5	477	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	NA	False	NA	-13	True	ATTAAA	-14	NA	34666112	34665027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34665374_34665612_34665681_34666049
transcript_92805.known	chr9	+	665	3	FSM	ENSG00000230074.4	ENST00000434627.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCAATCAGGTGTGT	34665209	True	NA	NA	False	NA	NA	NA	34665664	34681298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34665768_34678099_34678269_34680905
transcript_92806.known	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	22.3059533657621	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	34987242	True	NA	18	True	AATAAA	-18	NA	34989693	34998431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
transcript_92807.known	chr9	+	2818	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	84.3682404699778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	34987798	False	NA	20	True	AATAAA	-20	NA	34990249	34998433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
transcript_92808.known	chr9	-	3382	17	FSM	ENSG00000165280.18	ENST00000417448.2	3382	17	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_16	692.294055003905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAAACGTTGGGTCAAA	-35069327	False	NA	-40	True	NA	NA	NA	35072205	35056587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35071756
transcript_92809.known	chr9	-	3746	17	FSM	ENSG00000165280.18	ENST00000358901.11	3746	17	0	0	0	0	multi-exon	FALSE	canonical	2	2023	junction_3	239.2966255508	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATTGAATTTTTTT	-35031178	True	NA	-11	True	ATTAAA	-28	NA	35072625	35056063	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_92812.nic	chr9	-	2456	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	65.1555438773953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077159	True	NA	-40	True	AGTAAA	-13	NA	35080037	35073838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_92815.known	chr9	-	2556	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	42.1925706464003	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077064	True	NA	-40	True	AGTAAA	-13	NA	35079942	35073838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_92816.nnic	chr9	-	2538	14	NNC	ENSG00000221829.10	novel	2556	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_6	73.2709973540311	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077064	True	NA	-40	True	AGTAAA	-13	NA	35079942	35073838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076449_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_92817.known	chr9	-	2108	13	FSM	ENSG00000221829.10	ENST00000425676.5	2108	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	80.5403625519528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTACTACATATACT	-35076815	False	2878	-36	True	AGTAAA	-17	NA	35079693	35073834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078604_35078737_35079150_35079242_35079440
transcript_9282.nic	chr1	+	2043	10	NIC	ENSG00000116747.13	novel	8291	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	32.8261413442938	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	193052159	True	NA	16	True	AATGAA	-44	NA	193059572	193084866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_193059777_193069033_193069635_193070553_193070620_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_92822.known	chr9	-	2464	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	33.1876707167482	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-35096591	False	25619	NA	False	AATAAA	-15	NA	35096601	35088688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_92832.known	chr9	-	1365	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	1498	junction_9	210.517058925792	2570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTTTGTCTTCAAG	-35077512	True	NA	NA	False	NA	NA	NA	35103131	35099777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_92838.known	chr9	-	1293	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	648.143104858024	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	-35103108	False	NA	NA	False	NA	NA	NA	35103195	35099775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
transcript_92858.known	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_8	7.07879756738388	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	-35115413	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
transcript_92860.nnic	chr9	-	1440	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1159	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	4.84481395124954	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACGTGTTAGTCTCATG	-35617184	False	NA	-27	True	TTTAAA	-4	NA	35617194	35609981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913
transcript_92863.known	chr9	-	1317	5	NNC	ENSG00000137078.10	novel	1222	5	NA	NA	-19	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	23.5199383502593	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTTTAGATTTTTA	-35648183	False	2767	-19	True	AATAAA	-8	NA	35650950	35649302	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35650082_35650183_35650246_35650356_35650415_35650416_35650638_35650753
transcript_92864.known	chr9	-	1222	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.34846922834953	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTTTACCTAGAAG	-35648164	False	2767	-11	True	AATAAA	-16	NA	35650931	35649294	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
transcript_92869.known	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	23.7562491778479	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	-35662381	True	NA	0	True	ATTAAA	-18	NA	35665195	35659342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_9287.known	chr1	+	8291	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	11.8189466535728	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193052198	True	NA	NA	False	NA	NA	NA	193059611	193091219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_92875.nic	chr9	-	1458	8	NIC	ENSG00000137135.18	novel	3678	9	NA	NA	0	85	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	84.6568101820762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCTGTCTCAGTTTT	-35662381	True	NA	-4	True	AGTAAA	-25	NA	35665195	35661433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35662003_35662178_35662268_35662511_35662742_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_92883.nic	chr9	-	1291	7	ISM	ENSG00000137135.18	ENST00000475323.5	2862	8	-66	2557	-63	85	5prime_fragment	FALSE	canonical	3	7	junction_2	99.1207176460434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCTGTCTCAGTTTT	-35662444	False	NA	-4	True	AGTAAA	-25	NA	35665258	35661433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_35662003_35662178_35662268_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_92885.known	chr9	+	1173	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	43.4649283906002	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	35656557	True	NA	NA	False	AATAAA	-16	NA	35658289	35661499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
transcript_92887.known	chr9	+	1264	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	17.6405073623181	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	35656559	True	NA	NA	False	AATAAA	-28	NA	35658291	35661511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
transcript_92890.known	chr9	+	899	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	77.6768144300473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	35656571	True	NA	14	True	ACTAAA	-19	NA	35658303	35661186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
transcript_92891.nnic	chr9	+	627	5	NNC	ENSG00000159884.12	novel	1173	6	NA	NA	0	4422	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	76.8126779900297	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGTGGTTTTTATCT	35656557	True	NA	NA	False	AATAAA	-24	NA	35658289	35665933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35665806
transcript_92894.known	chr9	+	1016	4	FSM	ENSG00000159884.12	ENST00000378406.5	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	5.8878405775519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGCTCCTGTGTGTTT	35656581	True	NA	15	True	ACTAAA	-20	NA	35658313	35661187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556
transcript_92897.known	chr9	+	804	6	FSM	ENSG00000159884.12	ENST00000327351.6	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.6540279437421	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCATGATGGAGTGCTC	35656584	True	NA	5	True	ACTAAA	-10	NA	35658316	35661177	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660765_35660859_35660939
transcript_92898.known	chr9	+	1546	11	FSM	ENSG00000107159.14	ENST00000378357.9	1546	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.22490309931942	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTAGTCACCTTTGT	35673915	False	NA	NA	False	AATAAA	-15	NA	35673927	35681159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35674363_35675537_35675568_35675760_35675932_35676063_35676207_35676296_35676390_35677789_35677857_35679184_35679343_35679853_35679999_35680112_35680140_35680752_35680835_35680964
transcript_929.known	chr1	+	571	6	FSM	ENSG00000251503.8	ENST00000602787.6	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	88.2994903722553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGACTTTCCTCGCTT	10428165	True	NA	NA	False	TTTAAA	-38	NA	10430434	10451411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_9290.known	chr1	+	3081	9	FSM	ENSG00000116747.13	ENST00000367446.7	3081	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.3448096264304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTTGCTCATAATTTT	193060013	False	NA	10	True	ATTAAA	-20	NA	193060033	193085985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_92900.nnic	chr9	-	1197	10	NIC	ENSG00000198467.16	novel	1018	9	NA	NA	40	0	combination_of_known_splicesites	FALSE	canonical	3	109	junction_4	187.958033140971	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-35676555	True	NA	-21	True	AATAAA	-17	NA	35690016	35682013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_92903.known	chr9	-	1018	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_4	112.665364575809	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-35676452	True	NA	-21	True	AATAAA	-17	NA	35689913	35682013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_92904.nic	chr9	-	1424	9	NIC	ENSG00000198467.16	novel	1018	9	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	125.066732187261	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-35676526	True	NA	-21	True	AATAAA	-17	NA	35689987	35682013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_92905.known	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	172.649029826408	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	-35690037	False	NA	0	True	AATAAA	-38	NA	35690056	35681992	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_92906.known	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	199.280228259103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	-35676464	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_92908.known	chr9	-	1185	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	223.560953656939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTCCATGCTGTTTT	-35676464	True	NA	-18	True	AATAAA	-8	NA	35689925	35682936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_92915.known	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_48	46.8515859890984	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	-35728601	True	NA	NA	False	NA	NA	NA	35732195	35696947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_92922.known	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	28.577744837548	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	35729792	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_92926.known	chr9	+	7028	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	6.30352084156148	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATGTCT	35747625	True	NA	NA	False	AATGAA	-9	NA	35749286	35758585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
transcript_92929.known	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	-35756559	False	NA	-3	True	AATAAA	-17	NA	35756613	35752991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35753281_35753659_35753769_35756496
transcript_9293.known	chr1	+	7848	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.452370627347	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193059290	True	NA	NA	False	NA	NA	NA	193059453	193091219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_92937.known	chr9	-	1716	7	FSM	ENSG00000137098.14	ENST00000396638.7	1716	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGAGTCACTGTGTGC	-35812250	False	24	19	True	CATAAA	-37	NA	35812262	35809794	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35810133_35810246_35810310_35810438_35810554_35810636_35810683_35810882_35811058_35811181_35812002_35812103
transcript_92939.known	chr9	-	649	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	10.7092249953019	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35813010	True	NA	0	True	AATAAA	-16	NA	35815042	35812959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
transcript_92940.known	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	177.27291812344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35815342	False	NA	0	True	AATAAA	-16	NA	35815354	35812959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
transcript_92944.known	chr9	-	734	4	FSM	ENSG00000137133.11	ENST00000461169.1	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_3	12.0369800568452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTCCCTTAATTATGC	-35812989	True	NA	-14	True	AATAAA	-2	NA	35815021	35812973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35813339_35813444_35813550_35813643_35813785_35814898
transcript_92947.nic	chr9	+	2096	15	ISM	ENSG00000122707.12	ENST00000377966.4	4412	21	8	14246	-3	-14246	5prime_fragment	TRUE	canonical	3	51	junction_13	58.2941170413675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTCCTCCCTGGAT	36033528	True	NA	16	True	AATAAA	-24	NA	36036920	36110209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956
transcript_92948.known	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	52.1989882564787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	36033547	True	NA	18	True	ATTAAA	-27	NA	36036939	36086195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
transcript_92949.nnic	chr9	+	1635	9	NNC	ENSG00000122707.12	novel	1717	9	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	51.5944219368722	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTCAGAGTTCGCTA	36033528	True	NA	8	True	ATTAAA	-17	NA	36036920	36086185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085265
transcript_92950.nic	chr9	+	995	9	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	48.5938203375697	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATATCTTGTCAGAGTTC	36033528	True	NA	4	True	ATTAAA	-13	NA	36036920	36086181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
transcript_92951.known	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_4	2.58602010819715	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	36136077	True	NA	4	True	AATAAA	-19	NA	36136732	36163906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
transcript_92956.nnic	chr9	+	958	5	NNC	ENSG00000122705.17	novel	1181	6	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	664.914797173292	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	36190666	True	NA	37	True	AATAAA	-19	NA	36190678	36212059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_36190912_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_92957.nnic	chr9	+	824	5	NNC	ENSG00000122705.17	novel	1078	5	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	673.534845052578	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	36152079	True	NA	37	True	AATAAA	-19	NA	36190901	36212059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_36191001_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_92958.known	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_1	75.8102070964062	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	36152098	True	NA	37	True	AATAAA	-19	NA	36190920	36212059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_92966.known	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	74.8205234320343	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568320	True	NA	10	True	AATAAA	-17	NA	36572894	36677682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_9297.known	chr1	+	1474	7	FSM	ENSG00000116747.13	ENST00000460715.2	1474	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.2925266193419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTAAATTATGAATGA	193052209	True	NA	-24	True	NA	NA	NA	193059622	193085235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193059777_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_92971.known	chr9	+	2363	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	99.9229195117417	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_92973.known	chr9	+	2342	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	98.925792895483	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_92976.known	chr9	+	2400	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	87.6815972710352	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_92987.known	chr9	+	2236	16	FSM	ENSG00000165304.8	ENST00000545008.5	2236	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	104.854481173778	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568322	True	NA	9	True	AATAAA	-16	NA	36572896	36677681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_92993.nic	chr9	+	2277	16	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	110.694574794291	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568265	True	NA	10	True	AATAAA	-17	NA	36572839	36677682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_36573008_36581643_36581740_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_92994.known	chr9	+	1966	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	124.611502946825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	36568355	True	NA	NA	False	CATAAA	-25	NA	36572929	36677417	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_92997.nic	chr9	+	2154	15	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	131.700204546352	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568265	True	NA	10	True	AATAAA	-17	NA	36572839	36677682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_36573008_36581643_36581740_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93000.known	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	124.432835747824	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568320	True	NA	9	True	AATAAA	-16	NA	36572894	36677681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93008.known	chr9	+	4520	2	FSM	ENSG00000281649.3	ENST00000625445.1	4520	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTACCCTCTTTCT	NA	False	NA	6	True	AATATA	-19	NA	37079856	37090507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080537_37086667
transcript_93010.known	chr9	+	579	2	FSM	ENSG00000281649.3	ENST00000627197.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCGTGCCAGCAGTCT	37074768	True	NA	NA	False	NA	NA	NA	37079936	37087152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080031_37086667
transcript_93012.known	chr9	+	636	2	FSM	ENSG00000281649.3	ENST00000631093.1	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGAAGCAATTCAAGAC	37074739	True	NA	NA	False	NA	NA	NA	37079907	37087176	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080035_37086667
transcript_93017.known	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	35.8780486509509	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115043	True	NA	7	True	AATAAA	-16	NA	37120573	37358149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93026.nnic	chr9	+	2019	8	NIC	ENSG00000147905.18	novel	2584	9	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	61.3374739803141	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37114977	True	NA	7	True	AATAAA	-16	NA	37120507	37358149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120624_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93032.nic	chr9	+	1068	3	NIC	ENSG00000147905.18	novel	1219	4	NA	NA	-96	-52	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	33.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCACTGCTTTTTTCT	37114947	True	NA	6	True	AGTAAA	-19	NA	37120477	37187002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120624_37126311_37126943_37186711
transcript_93039.nic	chr9	+	1221	9	NIC	ENSG00000137106.18	novel	1250	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	178.271518687086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATAACTCGTGCCAGT	37414932	True	NA	NA	False	ATTAAA	-16	NA	37422673	37432811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37432532
transcript_93040.known	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	58.6662967554626	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	37414954	True	NA	14	True	ATTAAA	-14	NA	37422695	37436990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_93043.known	chr9	+	1080	9	FSM	ENSG00000137106.18	ENST00000460882.5	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	139.061081453439	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGGATCCACAGGCAG	37414954	True	NA	NA	False	NA	NA	NA	37422695	37436848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_9305.known	chr1	-	682	4	FSM	ENSG00000023572.10	ENST00000367439.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	10.7082522694727	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCACTTGCCAATTC	-193103494	True	NA	-25	True	AATAAA	-17	NA	193105414	193096469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105263
transcript_93058.known	chr9	+	602	6	FSM	ENSG00000137106.18	ENST00000491488.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	217.543191113857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCGCAACACCATGTC	37414983	True	NA	NA	False	NA	NA	NA	37422724	37436692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422834_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_93059.nic	chr9	+	787	5	ISM	ENSG00000137106.18	ENST00000377824.8	1844	7	-54	2944	-6	-383	5prime_fragment	FALSE	canonical	3	398	junction_1	60.7263328383989	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTGATAAAAGCAAGTT	37414918	True	NA	NA	False	AATAAA	-27	NA	37422659	37428775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_93061.known	chr9	+	1136	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	168.701474504522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	37414924	True	NA	NA	False	NA	NA	NA	37422665	37429158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_93063.known	chr9	+	597	4	FSM	ENSG00000137106.18	ENST00000482603.1	597	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	250.576668240813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATAACTCGTGCCAGT	37429761	True	NA	NA	False	ATTAAA	-16	NA	37429785	37432811	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37429837_37430510_37430647_37432007_37432139_37432532
transcript_93064.known	chr9	+	1704	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	177.020081841016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	37415004	True	NA	-10	True	NA	NA	NA	37422745	37434879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
transcript_93066.known	chr9	+	1855	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	9.82827763762879	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	37482438	True	NA	14	True	TATAAA	-23	NA	37485947	37503697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_9307.known	chr1	+	1791	8	FSM	ENSG00000116747.13	ENST00000367441.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.141025490483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	193068898	False	NA	16	True	AATGAA	-44	NA	193069015	193084866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_93071.known	chr9	-	635	2	FSM	ENSG00000175768.13	ENST00000544379.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGTAAATAATGTCAAA	-37583574	True	NA	58	True	NA	NA	NA	37592596	37588641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592252
transcript_93072.known	chr9	-	808	2	FSM	ENSG00000175768.13	ENST00000377773.9	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592309
transcript_93073.known	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4980	junction_1	0	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592411
transcript_93074.known	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-37583582	True	NA	54	True	NA	NA	NA	37592604	37588457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592290
transcript_93078.known	chr9	+	2293	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	8.89873586527884	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	37751973	True	NA	8	True	ATTAAA	-17	NA	37753804	37778972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_9308.known	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_8	27.633482860472	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	193115884	True	NA	27	True	AATAAA	-28	NA	193122030	193254815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
transcript_93085.known	chr9	+	1443	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	15.7950743904548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	37751985	True	NA	-5	True	AATAAA	-5	NA	37753816	37778022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_93096.known	chr9	-	1813	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	88.2660120821649	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCGTGTGTTTCTAA	-37770704	True	NA	NA	False	GATAAA	-7	NA	37785064	37779713	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
transcript_931.nic	chr1	+	1362	6	Fusion	ENSG00000175279.22_ENSG00000241563.4	novel	914	5	NA	NA	-58	-339	multi-exon	FALSE	canonical	3	25	junction_5	97.4342855467212	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	10430598	False	NA	7	True	AATAAA	-16	NA	10430724	10451659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_93100.known	chr9	-	773	3	FSM	ENSG00000107371.14	ENST00000490516.5	773	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	84.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTATGTATTATTA	-37770353	False	NA	NA	False	TTTAAA	-17	NA	37784713	37780587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37780881_37783913_37784064_37784383
transcript_93101.known	chr9	-	768	3	FSM	ENSG00000107371.14	ENST00000396521.3	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	279	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCAGAAGATAAGGT	-37770704	True	NA	NA	False	NA	NA	NA	37785064	37780606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37780881_37783913_37784064_37784720
transcript_93102.known	chr9	-	2253	3	FSM	ENSG00000107371.14	ENST00000465860.6	2253	3	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	102.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGATACATTTCACAAC	-37770385	False	NA	NA	False	AATATA	-19	NA	37784745	37780059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37782138_37783913_37784064_37784720
transcript_93105.known	chr9	-	1871	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGTAGCAAACTGAG	-37904090	True	NA	-1	True	AATAAA	-18	NA	37904353	37879399	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
transcript_93107.known	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-37902520	True	NA	-3	True	AATAGA	-15	NA	37904127	37887603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37888593_37899828_37899951_37904067
transcript_93108.known	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	38385649	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_38392808_38395739
transcript_93112.nnic	chr9	-	2394	11	NNC	ENSG00000180071.20	novel	3971	16	NA	NA	62	5788	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	6.32139225171164	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTCTGTATAATTC	-38620054	True	NA	NA	False	AATAAA	-15	NA	38620534	38595380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_38596404_38601130_38601202_38603158_38603213_38604152_38604288_38604862_38604917_38607425_38607494_38610272_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
transcript_93115.nnic	chr9	-	854	3	NNC	ENSG00000278175.5	novel	902	3	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	38.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39810001	False	NA	NA	False	AATAAA	-15	NA	39810118	39803495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_39803860_39809485_39809588_39809730
transcript_93116.known	chr9	-	826	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	15	0	-13	multi-exon	FALSE	canonical	3	105	junction_1	2	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809945	False	442	NA	False	AATAAA	-15	NA	39810062	39803495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39803860_39809485_39809616_39809730
transcript_93117.nic	chr9	-	813	3	NIC	ENSG00000278175.5	novel	902	3	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	51	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809914	False	NA	NA	False	AATAAA	-15	NA	39810031	39803495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_39803860_39809485_39809634_39809730
transcript_93118.known	chr9	-	1397	2	FSM	ENSG00000278175.5	ENST00000670314.1	1397	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	-39809955	False	NA	NA	False	AATAAA	-21	NA	39810072	39808560	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39809616_39809730
transcript_93120.known	chr9	-	694	2	FSM	ENSG00000278175.5	ENST00000666906.2	1012	2	305	13	96	-13	multi-exon	FALSE	canonical	3	105	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809698	False	NA	NA	False	AATAAA	-15	NA	39809815	39803495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39803860_39809485
transcript_93121.nnic	chr9	-	1100	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-31	-107556	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTCCTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	40106642	40091348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_40092164_40106357
transcript_93123.nnic	chr9	-	1692	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	6.34209919681348	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTCATATGCTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	39874198	39816540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_93125.nnic	chr9	-	1858	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	-216	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	6.34209919681348	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874422	39816598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_93126.known	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39817730_39818820_39818925_39873909
transcript_93128.nnic	chr9	-	780	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-10	-107855	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTGATACCATTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	40106621	40091647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_40092164_40106357
transcript_93134.nnic	chr9	+	1543	7	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_4	11.0817668065862	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990855	True	NA	NA	False	AATAAA	-32	NA	40992247	41014136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_93138.nnic	chr9	+	1235	7	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	11.8743420870379	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990867	True	NA	NA	False	AATAAA	-32	NA	40992259	41014136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_93141.nnic	chr9	+	1417	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	15.6	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990855	True	NA	NA	False	AATAAA	-32	NA	40992247	41014136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_93142.nnic	chr9	+	1109	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	16.2160414404996	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990867	True	NA	NA	False	AATAAA	-32	NA	40992259	41014136	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_93146.nnic	chr9	+	925	5	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	-3	-1065	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.92787604642	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTTACTGTTTTCA	40990872	True	NA	NA	False	AATAAA	-35	NA	40992264	41014139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992480_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_9315.nic	chr1	+	1434	14	ISM	ENSG00000134371.14	ENST00000649895.1	2364	16	3	4636	3	-4636	5prime_fragment	FALSE	canonical	3	338	junction_8	25.4665344854424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGACCAGATGCAA	193115839	True	NA	NA	False	AATACA	-3	NA	193121985	193233057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992
transcript_93159.known	chr9	-	1672	15	FSM	ENSG00000215126.11	ENST00000377391.8	1672	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	436.062817277792	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	NA	False	NA	NA	False	AATAAA	-16	NA	41189317	41131308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_9316.nic	chr1	-	1969	9	ISM	ENSG00000162687.19	ENST00000609185.5	3622	27	-532	201150	-331	63253	5prime_fragment	TRUE	canonical	3	20	junction_5	2.93417364857638	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGAACATGGTATGTAAA	-196608767	True	NA	NA	False	NA	NA	NA	196608891	196429008	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
transcript_93161.nic	chr9	-	1378	15	NIC	ENSG00000215126.11	novel	2433	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_7	424.558528212013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189364	41131677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_93175.known	chr9	-	721	7	FSM	ENSG00000215126.11	ENST00000617933.1	721	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	588.511894527205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	41189436	41171919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_41171935_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_93177.nic	chr9	-	654	3	ISM	ENSG00000215126.11	ENST00000617933.1	721	7	12	11494	12	-11494	5prime_fragment	FALSE	canonical	3	1131	junction_1	231.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	41189424	41183413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_41183661_41185992_41186080_41189104
transcript_93178.nnic	chr9	-	722	2	NNC	ENSG00000237357.2	novel	2579	2	NA	NA	-28	3873	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATCATCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	42569381	42562805	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_42563175_42569028
transcript_93179.known	chr9	+	559	3	FSM	ENSG00000231527.7	ENST00000657353.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	61856551	False	NA	NA	False	AAGAAA	-18	NA	61856570	61975965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_61856815_61917467_61917608_61975790
transcript_93180.known	chr9	-	439	2	FSM	ENSG00000235659.1	ENST00000377547.3	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGGCTCTACTGACAG	NA	False	NA	NA	False	NA	NA	NA	61866965	61865754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_61866078_61866849
transcript_93182.known	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62376814_62432875_62432980_62434066
transcript_93185.known	chr9	-	2541	2	FSM	ENSG00000204802.3	ENST00000377518.3	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGGGCAAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62376783	62374127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_62376383_62376497
transcript_93186.nnic	chr9	+	830	3	NNC	ENSG00000226007.3	novel	1549	3	NA	NA	-4	4181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	62532332	62538905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_62532689_62534372_62534483_62538541
transcript_93187.nnic	chr9	+	732	2	NNC	ENSG00000226007.3	novel	2245	2	NA	NA	-4	4193	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTTCCAGTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	62532332	62538917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_62532689_62538541
transcript_93188.known	chr9	+	667	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897370	62898904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62897735_62897877_62897980_62898703
transcript_9319.known	chr1	-	6132	27	FSM	ENSG00000066279.19	ENST00000294732.11	6132	27	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_10	62.826943679213	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTATTCCTGTCTAT	-197142128	True	NA	NA	False	AATAAA	-19	NA	197146694	197084127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
transcript_93190.known	chr9	+	1567	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	9.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897371	62899777	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62897735_62897849_62897980_62898703
transcript_93192.known	chr9	-	1610	5	FSM	ENSG00000234665.9	ENST00000445604.7	1610	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.280795934532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCACATGTAGGATCAAT	NA	False	NA	NA	False	NA	NA	NA	62898095	62865596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_62865734_62866966_62867111_62867696_62868234_62869189_62869305_62897418
transcript_93193.known	chr9	-	1713	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTAACTGCTTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	62898095	62867202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_62868234_62869189_62869305_62897528
transcript_93196.known	chr9	+	2541	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGGGCCAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62897448	62900104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62897735_62897849
transcript_93197.known	chr9	+	1604	2	FSM	ENSG00000170161.7	ENST00000661415.1	1604	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACCTGGTGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	62897437	62899765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62897980_62898703
transcript_93203.nnic	chr9	-	580	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16420	59	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	774.235267861133	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	-65306424	True	NA	NA	False	AATAAA	-16	NA	65306595	65287854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65306363
transcript_93204.nnic	chr9	-	482	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16433	59	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	777.08441465519	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	-65306411	True	NA	NA	False	AATAAA	-16	NA	65306582	65287854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65306448
transcript_9321.known	chr1	+	600	3	FSM	ENSG00000203724.11	ENST00000367393.8	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACAAATGTTTGTGTGT	197902565	True	NA	NA	False	AATAAA	-9	NA	197902629	197907362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_197902914_197905795_197905898_197907148
transcript_93251.known	chr9	+	1411	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	559.151007232294	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65669543	True	NA	0	True	AATAAA	-16	NA	65675895	65733670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93281.known	chr9	+	1662	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	550.338597073267	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	65669575	True	NA	NA	False	AATAAA	-16	NA	65675927	65734041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93293.known	chr9	+	1648	14	FSM	ENSG00000147996.17	ENST00000476161.5	1648	14	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	561.43105400607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGGTAAATTAAG	65669541	True	NA	NA	False	NA	NA	NA	65675893	65732393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801
transcript_933.known	chr1	+	905	5	FSM	ENSG00000175279.22	ENST00000309048.8	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	32.104322138927	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	10428163	True	NA	23	True	AATAAA	-15	NA	10430432	10442808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_93302.known	chr9	+	1242	14	FSM	ENSG00000147996.17	ENST00000430059.6	1242	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	591.079275612985	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	65669571	True	NA	4	True	AATAAA	-20	NA	65675923	65733674	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93304.nic	chr9	+	1321	14	NIC	ENSG00000147996.17	novel	1436	16	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_7	584.826975879171	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	2	True	AATAAA	-18	NA	65675812	65733672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93309.known	chr9	+	1143	13	FSM	ENSG00000147996.17	ENST00000377395.8	1143	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	629.798623018148	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	65669585	True	NA	6	True	AATAAA	-22	NA	65675937	65733676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93317.nnic	chr9	+	757	6	NNC	ENSG00000147996.17	novel	722	4	NA	NA	-4497	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	688.309407170932	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	2	True	AATAAA	-18	NA	65714887	65733672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_65715165_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93321.known	chr9	+	894	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	526.087445202791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	65669522	True	NA	NA	False	AATAAA	-14	NA	65675874	65682026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
transcript_93323.known	chr9	+	1347	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	174.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	65669522	True	NA	NA	False	AATAAA	-42	NA	65675874	65682577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573
transcript_9335.known	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	338	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	200406570	True	NA	27	True	AATAAA	-20	NA	200411799	200475513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200473908
transcript_93358.known	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_12	408.430301550325	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	NA	False	NA	NA	False	AATAAA	-39	NA	68241982	68300035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93362.nic	chr9	+	1387	15	NIC	ENSG00000196873.16	novel	2437	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_4	424.821715306455	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	NA	False	NA	NA	False	AATAAA	-19	NA	68241917	68299644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93363.nic	chr9	+	1746	15	NIC	ENSG00000196873.16	novel	2437	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_4	424.821715306455	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	68241925	68300011	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93373.known	chr9	+	1665	14	FSM	ENSG00000196873.16	ENST00000377342.9	1665	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	428.032861095401	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	68241925	68300015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93374.nic	chr9	+	1246	14	NIC	ENSG00000196873.16	novel	1685	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_7	441.068739694954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	NA	False	NA	NA	False	AATAAA	-19	NA	68241943	68299644	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_9338.known	chr1	+	319	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	163	1	4	0	multi-exon	FALSE	canonical	3	307	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	200406600	True	NA	20	True	AATAAA	-22	NA	200411829	200415550	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200415364
transcript_9339.known	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-200404952	True	NA	-31	True	AATAAA	-18	NA	200410036	200404950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200409724_200409945
transcript_93392.known	chr9	+	721	7	FSM	ENSG00000196873.16	ENST00000616550.4	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	533.743618228827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	68241853	68259361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68259346
transcript_93393.known	chr9	+	1403	4	FSM	ENSG00000196873.16	ENST00000377349.6	1403	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	528.831626218486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTCTTTTTACCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	68241944	68248589	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612
transcript_93394.known	chr9	+	1736	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_2	233.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	NA	False	NA	NA	False	ATTAAA	-45	NA	68241955	68249031	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68245212_68245300_68247612
transcript_93396.known	chr9	+	922	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	189.432705729502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	69031605	True	NA	NA	False	NA	NA	NA	69035761	69073022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
transcript_9340.known	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	-200404972	True	NA	-20	True	AATAAA	-29	NA	200410056	200404939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200409720_200409945
transcript_93400.known	chr9	+	2632	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	210.492016211753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	69031594	True	NA	-38	True	AATAAA	-36	NA	69035750	69074850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
transcript_93402.nic	chr9	-	605	3	FSM	ENSG00000278910.5	ENST00000690153.1	617	3	5	7	0	-3	multi-exon	FALSE	canonical	3	8	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	-69307059	True	NA	NA	False	AATAAA	-17	NA	69307133	69296684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_69296868_69304935_69305078_69306853
transcript_93403.known	chr9	-	750	4	FSM	ENSG00000278910.5	ENST00000624238.3	764	4	7	7	-2	-3	multi-exon	FALSE	canonical	0	0	junction_3	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	-69307061	True	NA	NA	False	AATAAA	-17	NA	69307135	69296684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_69296868_69304935_69305078_69306147_69306291_69306853
transcript_93404.known	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.4764045897475	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	-25	True	NA	NA	NA	69324566	69392558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
transcript_93408.nic	chr9	-	922	5	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	0	22407	0	0	5prime_fragment	TRUE	canonical	3	48	junction_3	7.01338006955277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGTGCATTGGTAAAGC	-69752823	True	NA	22	True	AATAAA	-42	NA	69760011	69731931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_93409.known	chr9	-	1689	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTTGTGGGTACC	-69752771	True	NA	NA	False	ATTAAA	-17	NA	69759959	69757122	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_69758705_69759852
transcript_9341.nnic	chr1	+	725	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCATTATATTCTGCA	200406582	True	NA	4	True	TATAAA	-15	NA	200411811	200478349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_93412.known	chr9	+	794	6	FSM	ENSG00000204711.9	ENST00000466872.2	794	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	72.7780186594826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818873	True	NA	4	True	AATAAA	-17	NA	69820827	69906227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69885052_69885123_69886837_69886896_69905953
transcript_93414.known	chr9	+	844	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	55.3642483919	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818862	True	NA	4	True	AATAAA	-17	NA	69820816	69906227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_93415.known	chr9	+	697	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6633634219397	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	69818872	True	NA	-24	True	AATGAA	-28	NA	69820826	69906199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_93416.known	chr9	+	748	5	FSM	ENSG00000204711.9	ENST00000527647.5	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	56.5392562738492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	69818872	True	NA	-24	True	AATGAA	-28	NA	69820826	69906199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69905953
transcript_93418.known	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	54.7905101272109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	69819005	False	NA	-19	True	NA	NA	NA	69820959	69858158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
transcript_93419.known	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	17	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	69818965	True	NA	2	True	AATAAA	-15	NA	69820919	69858179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69856554_69856674_69857908
transcript_93420.known	chr9	+	3351	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.13204633009385	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	NA	False	NA	10	True	AATAAA	-18	NA	70043847	70226972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
transcript_93423.known	chr9	+	474	1	FSM	ENSG00000236801.1	ENST00000446071.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCAGATTAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	70217194	70217668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_70217200_70217700
transcript_93424.nnic	chr9	+	2771	20	NIC	ENSG00000198887.9	novel	5949	25	NA	NA	-29	2960	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	40.3177820038054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGAAATAGAACAG	70254479	True	NA	NA	False	AATATA	-7	NA	70258948	70347634	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70347065_70347162_70347612
transcript_93426.known	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	39.5660488578557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	70254508	True	NA	28	True	AATAAA	-18	NA	70258977	70354873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
transcript_93428.nnic	chr9	-	1410	10	NNC	ENSG00000083067.24	novel	2075	8	NA	NA	956	-103788	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.2893207547044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTAGGCTGGTTGTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	70864513	70639740	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_70639880_70640559_70640661_70681505_70681579_70761600_70761725_70784104_70784280_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431
transcript_93429.nic	chr9	-	1296	7	ISM	ENSG00000083067.24	ENST00000396283.5	3484	9	4510	9769	956	3	internal_fragment	FALSE	canonical	2	4	junction_1	7.2033942616581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATAGGCTGTGGTCTCC	NA	False	NA	-4	True	AATAAA	-22	NA	70864513	70783856	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_70784280_70811169_70811245_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431
transcript_93430.known	chr9	-	1260	7	FSM	ENSG00000083067.24	ENST00000361823.9	1260	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.6303487615064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTCATAGGCTGTGGTC	NA	False	NA	-7	True	AATAAA	-19	NA	70869029	70783859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_70784280_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431_70864512_70868985
transcript_93437.known	chr9	+	539	5	FSM	ENSG00000155621.15	ENST00000377027.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	46.3060471212994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTATTAAAAGTCTG	71911642	False	NA	NA	False	AATGAA	-6	NA	71911801	71972843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_71911837_71918424_71918556_71947005_71947113_71971504_71971619_71972691
transcript_93439.known	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.1980390271856	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	71911554	False	NA	9	True	AATAAA	-16	NA	71911638	71973457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
transcript_93442.known	chr9	+	902	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAAGTCAATTTA	71910391	False	NA	-24	True	NA	NA	NA	71911509	71973152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_71911837_71971504_71971619_71972691
transcript_93449.known	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	256.153220206622	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	-72364603	False	NA	29	True	NA	NA	NA	72364626	72355832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
transcript_93450.known	chr9	+	671	2	FSM	ENSG00000225434.4	ENST00000451596.3	677	2	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	72305417	True	NA	NA	False	AATAAA	-17	NA	72305429	72315464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_72305626_72314989
transcript_93451.known	chr9	-	2096	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.8124228384477	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	-72952968	True	NA	-2	True	AATAAA	-16	NA	72953053	72900670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
transcript_93453.known	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	4.66071048470319	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	73151549	True	NA	8	True	AATAAA	-18	NA	73151864	73170393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
transcript_93455.known	chr9	-	2351	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTGTTTATTGTCAA	-74951376	True	NA	-18	True	AATAAA	-15	NA	74952912	74946582	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_74948207_74952185
transcript_9346.known	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	10.5810766783664	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-200668343	True	NA	NA	False	AATAAA	-23	NA	200669907	200644036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_93466.known	chr9	-	2050	10	FSM	ENSG00000106733.21	ENST00000376811.5	2050	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	25.8891273236517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATCTTTTTTTTATATA	-75087066	True	NA	NA	False	AATAAA	-19	NA	75088190	75060572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078583_75083086_75083151_75088007
transcript_93467.nnic	chr9	-	1535	10	NNC	ENSG00000106733.21	novel	2050	10	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	23.165001272407	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	75088273	75061199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078612_75083086_75083151_75088007
transcript_93472.known	chr9	-	1754	9	FSM	ENSG00000106733.21	ENST00000361092.9	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	11.5589521583922	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	-75087031	True	NA	NA	False	AATAAA	-15	NA	75088155	75060576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_93475.known	chr9	-	1121	8	FSM	ENSG00000106733.21	ENST00000376808.8	1121	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	25.0420055270405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	-75087093	True	NA	-1	True	AATAAA	-19	NA	75088217	75061199	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_93477.known	chr9	-	453	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCCGTAAAATTT	-75087011	True	NA	NA	False	AATATA	-38	NA	75088135	75087543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75087869_75088007
transcript_93479.known	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	34.5139084506987	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	75086817	True	NA	88	True	AGTAAA	-18	NA	75088513	75147265	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_93481.nnic	chr9	+	1216	9	NIC	ENSG00000134996.12	novel	1348	10	NA	NA	-34	-67	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	85.7714987627009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTCCGTTTCTGT	75086783	True	NA	21	True	AATAAA	-18	NA	75088479	75147198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75146682
transcript_93482.nnic	chr9	+	844	9	NIC	ENSG00000134996.12	novel	1348	10	NA	NA	39	-418	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	86.2698346758587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCAGTGTTGCACTGTG	75086856	True	NA	12	True	TATAAA	-17	NA	75088552	75146847	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_75088727_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_93486.known	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	7.25718035235908	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-76394280	False	NA	-15	True	AATAAA	-17	NA	76394426	76385525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
transcript_93492.known	chr9	+	5566	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	34.0978982734518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	76457071	True	NA	12	True	ATTAAA	-21	NA	76459181	76507416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
transcript_93495.known	chr9	+	461	3	FSM	ENSG00000187210.14	ENST00000480311.5	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTTTTAAGGATTCATCAA	76457111	True	NA	NA	False	NA	NA	NA	76459221	76502469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_76459306_76500915_76501062_76502238
transcript_93499.known	chr9	-	1264	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.58693797647189	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGCAAGTTGTCT	-76906030	False	NA	NA	False	AAAAAG	-7	NA	76906087	76823247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
transcript_935.known	chr1	+	1469	5	FSM	ENSG00000251503.8	ENST00000400900.6	1469	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	102.535359754574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCATGGATTATAGC	NA	False	NA	NA	False	NA	NA	NA	10430101	10452153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10451376
transcript_9350.nnic	chr1	-	2062	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	-85	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	27.0334155362499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-200668428	True	NA	NA	False	AATAAA	-23	NA	200669992	200644036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_93500.nic	chr9	+	1135	8	NIC	ENSG00000197969.14	novel	10086	69	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	10.6195814514547	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATGCCCTCCAA	77174239	True	NA	NA	False	TTTAAA	-23	NA	77177529	77211617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77211212
transcript_93502.known	chr9	-	2497	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	7.82446306287034	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	-77647621	True	NA	-8	True	AATATA	-15	NA	77648322	77423078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
transcript_93509.known	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_7	128.864209053561	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	78266249	True	NA	72	True	ATTAAA	-17	NA	78297124	78330093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
transcript_9351.nnic	chr1	-	2105	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	-15	-10	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	26.6984185965303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGGATGAAGTTTCT	-200668358	True	NA	NA	False	AATAAA	-13	NA	200669922	200644046	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200644518_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_93516.known	chr9	+	1411	8	FSM	ENSG00000135069.14	ENST00000347159.6	1411	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_7	449.466259431503	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGCCCTCTAGGTGCTG	78266267	True	NA	NA	False	NA	NA	NA	78297142	78329454	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328980
transcript_9352.nnic	chr1	-	1883	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	27.0334155362499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTATTTCCCTTAAT	-200668333	True	NA	NA	False	AATAAA	-16	NA	200669897	200644120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_93536.known	chr9	-	1115	6	FSM	ENSG00000196781.16	ENST00000376463.3	1115	6	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	165.306261224432	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	-81687356	False	486	-2	True	AATAAA	-18	NA	81687368	81633468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333
transcript_93542.nnic	chr9	-	548	3	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141643	-216	multi-exon	FALSE	canonical	3	80	junction_1	6	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGAGATTCAGTGTCT	-82886402	False	NA	-7	True	AATAAA	-25	NA	82886435	82744282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_-_82744445_82831037_82831127_82886138
transcript_93543.nnic	chr9	-	357	3	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-144539	-216	multi-exon	FALSE	canonical	0	0	junction_2	40	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGAGATTCAGTGTCT	NA	False	NA	-7	True	AATAAA	-25	NA	82889331	82744282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_-_82744445_82831037_82831127_82889225
transcript_93544.known	chr9	+	936	5	FSM	ENSG00000148057.16	ENST00000376419.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.96074487943871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTCCCTGGAAATT	83622972	True	NA	2	True	AATAAA	-16	NA	83623142	83644123	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83623222_83628180_83628212_83628872_83628960_83641547_83641592_83643428
transcript_93545.known	chr9	+	629	4	FSM	ENSG00000148057.16	ENST00000405990.3	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATGTTTCTAAAGGC	83622995	True	NA	NA	False	NA	NA	NA	83623165	83643870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83623222_83628872_83628960_83641547_83641592_83643428
transcript_93546.known	chr9	-	3868	11	FSM	ENSG00000135018.14	ENST00000376395.9	3868	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	294.90996931267	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTTGTCTTGCCTCTT	-83687490	True	NA	-6	True	AATAAA	-16	NA	83707958	83659967	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83666434_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_93549.known	chr9	-	2299	10	FSM	ENSG00000135018.14	ENST00000257468.11	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	330.727406309109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCATTTGCACTCTAT	-83687466	True	NA	-22	True	AATAAA	-15	NA	83707934	83661428	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_93551.known	chr9	-	1801	13	FSM	ENSG00000165113.13	ENST00000376371.7	1801	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.8831932766045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-83817027	True	NA	-4	True	AATAAA	-18	NA	83817769	83739424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83768817_83768971_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_93552.known	chr9	-	1511	12	FSM	ENSG00000165113.13	ENST00000376365.7	1511	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	10.0995049383621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-83816890	False	NA	-4	True	AATAAA	-18	NA	83817632	83739424	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_93553.nnic	chr9	-	577	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-93	-20836	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	7.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	-83920800	True	NA	NA	False	AATAAA	-17	NA	83921558	83919531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_83919814_83920105_83920213_83921370
transcript_93555.known	chr9	-	2468	4	FSM	ENSG00000165118.15	ENST00000376344.8	2468	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	5.43650214343336	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAATGGATTATTTCAT	-83955483	True	NA	-5	True	AATAAA	-23	NA	83956742	83938310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163
transcript_93556.known	chr9	-	620	3	FSM	ENSG00000165118.15	ENST00000376340.2	620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGGCGTGGTGGCTC	-83956302	False	NA	NA	False	AATAAA	-18	NA	83956327	83953647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83953844_83955380_83955641_83956163
transcript_93557.known	chr9	-	2067	5	FSM	ENSG00000165118.15	ENST00000314700.5	2067	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	22.8623598956888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGAATGGATTATTT	-83956961	True	NA	-8	True	AATAAA	-20	NA	83956986	83938313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163_83956255_83956896
transcript_93563.known	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5662	junction_16	1090.54421620584	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83963568	True	NA	-4	True	AATATA	-14	NA	83980604	83968082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_9357.known	chr1	+	3496	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTACAAGTTGTGTG	201023651	True	NA	8	True	AATAAA	-18	NA	201023960	201028792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201024086_201025421
transcript_93574.nnic	chr9	-	2002	17	NNC	ENSG00000165119.21	novel	2038	17	NA	NA	528	0	at_least_one_novel_splicesite	FALSE	canonical	3	582	junction_16	2128.50797214857	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83979647	False	NA	-18	True	AATAAA	-14	NA	83979662	83968908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83979600
transcript_93576.nic	chr9	-	2102	17	NIC	ENSG00000165119.21	novel	2038	17	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	5662	junction_16	1138.91447769356	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83980649	False	NA	-18	True	AATAAA	-14	NA	83980664	83968908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_9358.known	chr1	+	2497	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	201023639	True	NA	NA	False	NA	NA	NA	201023948	201027790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201024077_201025421
transcript_93583.nnic	chr9	-	2062	17	NNC	ENSG00000165119.21	novel	2889	17	NA	NA	528	0	at_least_one_novel_splicesite	FALSE	canonical	3	582	junction_16	2106.86952313142	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83979647	False	NA	-18	True	AATAAA	-14	NA	83979662	83968908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83979600
transcript_9360.known	chr1	-	545	6	FSM	ENSG00000116857.17	ENST00000414605.2	545	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	503.553214665541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	-201147093	True	NA	NA	False	NA	NA	NA	201154464	201135800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153782_201153960_201154444
transcript_9361.known	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	473.699229469502	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	-201147062	True	NA	NA	False	NA	NA	NA	201154433	201135598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
transcript_93621.known	chr9	-	2652	16	FSM	ENSG00000165119.21	ENST00000351839.7	2652	16	0	0	0	0	multi-exon	FALSE	canonical	3	6067	junction_1	927.935907748422	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	-83978437	False	4887	-25	True	AATAAA	-1	NA	83978452	83968196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
transcript_93622.known	chr9	-	2038	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1584.04012240063	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83943574	True	NA	-18	True	AATAAA	-14	NA	83980250	83968908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_93623.known	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1552.19392614937	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83943539	True	NA	-4	True	AATATA	-14	NA	83980215	83968082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_93627.known	chr9	+	3300	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_1	46.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977581	True	NA	110	True	ATTAAA	-21	NA	83980804	84004074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83980892_83999708_83999798_84000950
transcript_9363.known	chr1	-	507	6	FSM	ENSG00000116857.17	ENST00000435310.5	507	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	480.431306223897	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	-201147047	False	NA	NA	False	NA	NA	NA	201154418	201135800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154361
transcript_93631.known	chr9	+	3420	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	111.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977574	True	NA	110	True	ATTAAA	-21	NA	83980797	84004074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83981005_83999708_83999798_84000950
transcript_93633.nnic	chr9	-	746	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-15956	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	-85460249	False	116	-5	True	ATTAAA	-15	NA	85460365	85402167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_85402688_85457364_85457476_85460250
transcript_93634.nnic	chr9	-	704	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-15996	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	9	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	-85460289	False	NA	-5	True	ATTAAA	-15	NA	85460405	85402167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_85402688_85457364_85457476_85460332
transcript_93635.nnic	chr9	-	780	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-16504	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	3.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	NA	False	NA	-5	True	ATTAAA	-15	NA	85460913	85402167	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_85402688_85457364_85457476_85460764
transcript_9364.known	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	485.806710534138	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-201147130	True	NA	-6	True	ATTAAA	-17	NA	201154501	201134772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
transcript_93642.known	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	32.4030658686173	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	85937574	True	NA	NA	False	NA	NA	NA	85941145	86025462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_93644.nnic	chr9	+	2666	23	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	79	-3164	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	57.2110779309089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTGCTGGAGATGAAAA	85937689	True	NA	74	True	AATAAA	-20	NA	85941260	86022298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_93649.nic	chr9	+	1852	18	ISM	ENSG00000135040.16	ENST00000361671.10	5813	23	-19	8792	-19	-8792	5prime_fragment	TRUE	canonical	3	177	junction_1	30.0570392010978	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGCTGTGGATTATT	85937555	True	NA	NA	False	AGTAAA	-18	NA	85941126	86016670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_9365.known	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	501.034928922126	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201171550	True	NA	-5	True	ATTAAA	-18	NA	201171574	201134771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
transcript_93659.known	chr9	+	690	7	FSM	ENSG00000135040.16	ENST00000416045.4	690	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	96.4140377054434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTTGACACTTCTGT	85937610	True	NA	NA	False	AATATA	-38	NA	85941181	85966672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85966595
transcript_93660.known	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	363.547643217349	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-86091481	True	NA	NA	False	AATAAA	-18	NA	86099558	86026145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_93661.known	chr9	-	3022	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	472.028430824005	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTCACAGCTCT	-86099797	True	NA	NA	False	AATAAA	-17	NA	86100149	86026146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
transcript_93669.known	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	192.236544103583	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	-86278716	False	3392	81	True	NA	NA	NA	86282108	86265678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
transcript_93670.known	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	32.2214559295855	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	-86279146	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
transcript_93677.nic	chr9	-	1742	10	ISM	ENSG00000083223.18	ENST00000277141.10	5724	28	-24	49594	20	-448	5prime_fragment	FALSE	canonical	3	73	junction_1	7.57350808353421	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACTGACATGGATTTA	-86353124	True	NA	2	True	ATTAAA	-32	NA	86354434	86337326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_93679.nic	chr9	-	1615	8	ISM	ENSG00000083223.18	ENST00000277141.10	5724	28	-24	52091	20	-2945	5prime_fragment	FALSE	canonical	3	75	junction_6	7.56738436465659	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAAGGAAGTATTTCG	-86353124	True	NA	NA	False	AATAAA	-19	NA	86354434	86339823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_93680.nic	chr9	-	1285	2	ISM	ENSG00000083223.18	ENST00000375957.5	2262	12	18096	-2	18096	0	3prime_fragment	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-86301538	False	NA	-24	True	AATAAA	-21	NA	86301548	86287732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_86288745_86301275
transcript_93681.known	chr9	-	2245	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	NA	False	AATAGA	-5	NA	87042419	87008514	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87010211_87041870
transcript_93682.known	chr9	+	2499	16	FSM	ENSG00000196730.13	ENST00000469067.5	2499	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	35.9767826367074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAATAAACCACTC	87497562	True	NA	NA	False	AATAGA	-34	NA	87497735	87650511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920
transcript_93683.known	chr9	+	626	3	FSM	ENSG00000196730.13	ENST00000495182.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGTGTTTTATCT	87493929	True	NA	4	True	AATAAA	-14	NA	87497834	87507002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87498108_87498969_87499140_87506819
transcript_93686.known	chr9	+	1593	9	FSM	ENSG00000135047.16	ENST00000676881.1	1593	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	83.4966316685889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	87723398	True	NA	33	True	AATAAA	-18	NA	87726121	87731393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726309_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_93687.known	chr9	+	1813	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	65.8870400064863	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	NA	False	NA	33	True	AATAAA	-18	NA	87725734	87731393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_93689.known	chr9	+	1654	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	46.7756259570459	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	87723395	True	NA	10	True	AATAAA	-27	NA	87726118	87731469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_93690.known	chr9	+	2129	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	45.4263251915468	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	NA	False	NA	7	True	AATAAA	-24	NA	87725550	87731466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_93692.known	chr9	+	1315	7	FSM	ENSG00000135047.16	ENST00000342020.6	1315	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	81.6341772108281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	87723395	True	NA	33	True	AATAAA	-18	NA	87726118	87731393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87731007
transcript_93695.known	chr9	-	2301	7	FSM	ENSG00000156345.18	ENST00000375883.7	2301	7	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	10.6562449087639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTAGAGAAACT	-87974732	False	NA	NA	False	AATAAA	-24	NA	87974753	87966445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_937.known	chr1	+	914	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	69.9405997972565	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCAGAGGATGGAAGC	10430051	False	NA	19	True	AAGAAA	-2	NA	10430782	10442334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_93700.known	chr9	-	1907	6	FSM	ENSG00000156345.18	ENST00000375871.8	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	10.2878569196893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAACAGACTAGAGA	-87974466	False	NA	NA	False	AATAAA	-20	NA	87974487	87966449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87967660_87969193_87969350_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_93704.known	chr9	-	1860	7	FSM	ENSG00000156345.18	ENST00000605159.5	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.8041861605658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	-87974234	True	NA	NA	False	AATAAA	-17	NA	87974505	87966610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87967632_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_93709.known	chr9	+	4459	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	95.975830290756	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	88375091	True	NA	18	True	AATAAA	-15	NA	88388443	88478694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_9371.known	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	75.1976562134752	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201147103	True	NA	-5	True	ATTAAA	-18	NA	201154474	201134771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
transcript_93712.known	chr9	+	706	5	FSM	ENSG00000106723.17	ENST00000485565.6	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	289.248163347669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTCTATTTCATC	88375099	True	NA	NA	False	NA	NA	NA	88388451	88475203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88468371_88468606_88475077
transcript_93714.nic	chr9	+	606	4	ISM	ENSG00000106723.17	ENST00000375859.4	4459	6	-29	15976	-15	80	5prime_fragment	FALSE	canonical	3	632	junction_3	75.8302197162993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCTTGAAGTCCTCCC	88375062	True	NA	19	True	AATAAA	-13	NA	88388414	88462718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495
transcript_93715.known	chr9	+	994	3	FSM	ENSG00000130045.17	ENST00000649870.2	989	3	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTATTGCCTTCTTTCT	88533936	True	NA	NA	False	AATAAA	-28	NA	88534032	88544978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_88534089_88535398_88535737_88544378
transcript_93716.known	chr9	+	1234	2	FSM	ENSG00000130045.17	ENST00000375854.8	1154	2	-73	-7	0	7	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGCCTTCTTTCTCA	88535008	False	NA	NA	False	AATAAA	-30	NA	88535104	88544980	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_88535737_88544378
transcript_9372.known	chr1	-	1330	16	FSM	ENSG00000118194.21	ENST00000509001.5	1330	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.8123937904413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCACCACACACTGA	-201377729	False	440	-25	True	NA	NA	NA	201377762	201359033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373402_201377622
transcript_93722.known	chr9	+	616	3	FSM	ENSG00000123975.5	ENST00000314355.7	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	5422	junction_1	153.5	6477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCAAGTTTTTGA	89279518	True	NA	26	True	AATAAA	-19	NA	89311194	89316703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89311352_89315169_89315298_89316372
transcript_9373.known	chr1	-	1156	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	12.2074658394862	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	-201377647	False	440	-5	True	AATAAA	-18	NA	201377680	201359013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_93730.known	chr9	+	3481	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	64.5822815774575	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTCTCAGTGGTC	89308888	True	NA	36	True	AATAAA	-36	NA	89318499	89359663	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_93734.nic	chr9	+	3371	17	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_6	65.5186042281122	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308863	True	NA	15	True	AATAAA	-15	NA	89318474	89359642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_93736.known	chr9	+	3320	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	87.3012027408558	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308907	True	NA	15	True	AATAAA	-15	NA	89318518	89359642	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_93743.nic	chr9	+	1244	8	ISM	ENSG00000187742.15	ENST00000375807.8	3481	17	-25	21153	-25	0	5prime_fragment	FALSE	canonical	3	131	junction_6	64.8181128628568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308863	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_93744.nic	chr9	+	1130	8	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_6	66.4889126862824	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308863	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_93745.nic	chr9	+	1123	8	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-44	21132	-25	0	5prime_fragment	FALSE	canonical	3	78	junction_2	96.9159113745056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308863	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_93747.nic	chr9	+	1009	8	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	97.8401445090461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308863	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_9375.known	chr1	-	1108	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	12.6686580962304	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	-201377633	False	440	-9	True	AATAAA	-14	NA	201377666	201359017	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_93751.nic	chr9	+	857	2	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-44	39272	-25	-10075	5prime_fragment	FALSE	canonical	3	320	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCCCGTTTCA	89308863	True	NA	NA	False	NA	NA	NA	89318474	89320370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_89318613_89319651
transcript_93753.nnic	chr9	+	1387	4	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	40.6639343344389	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCAATCCAGTTGCATA	90412919	True	NA	10	True	AATAAA	-21	NA	90413038	90429448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr9_+_90413293_90415022_90415122_90427768_90427834_90428479
transcript_93756.nnic	chr9	+	3264	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	20	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCAATCCAGTTGCATA	NA	False	NA	10	True	AATAAA	-21	NA	90412891	90429448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr9_+_90415122_90427768_90427834_90428479
transcript_93758.nnic	chr9	+	1297	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	44.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCAATCCAGTTGCATA	90412991	False	NA	10	True	AATAAA	-21	NA	90413029	90429448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr9_+_90413293_90427768_90427834_90428479
transcript_9376.known	chr1	-	1007	15	FSM	ENSG00000118194.21	ENST00000367320.6	1007	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.1947101385822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGACTGGCATTTC	-201377628	False	440	-15	True	AATAAA	-8	NA	201377661	201359023	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365609_201365671_201366837_201366872_201367770_201367804_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_93763.nnic	chr9	-	1115	3	NNC	ENSG00000231107.2	novel	1096	3	NA	NA	12841	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACATTCCCTCTGCCT	-90415011	True	NA	-17	True	AATAAA	-26	NA	90415113	90300895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_90301654_90383519_90383722_90414958
transcript_93769.known	chr9	-	2783	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_4	56.4137864898506	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-92105036	True	NA	-11	True	AATAAA	-14	NA	92115413	92031146	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_9377.known	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_3	19.0904280843685	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-201397398	True	NA	0	True	TTTAAA	-15	NA	201399324	201380832	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
transcript_93774.known	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	298.956451678167	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	-92105006	True	NA	NA	False	AATAAA	-27	NA	92115383	92079060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_93776.known	chr9	-	4300	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	379.685155442696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	-92275090	True	NA	-22	True	AATAAA	-8	NA	92293716	92210348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_93777.known	chr9	-	4656	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_33	329.625992248549	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-92275074	True	NA	-4	True	AATAAA	-15	NA	92293700	92210206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_93778.known	chr9	-	4455	34	FSM	ENSG00000196305.19	ENST00000684542.1	4455	34	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	389.389534228119	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACTAGACATCTAATAAAA	-92275069	True	NA	-37	True	CATAAA	-31	NA	92293695	92210239	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269877_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_93780.known	chr9	-	4406	33	FSM	ENSG00000196305.19	ENST00000683537.1	4406	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_29	394.683515171887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-92275108	True	NA	-35	True	CATAAA	-33	NA	92293734	92210237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_93784.nic	chr9	-	2588	20	ISM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	45993	0	-15579	5prime_fragment	FALSE	canonical	3	1048	junction_19	116.239007760767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGGCCATGGAGGCG	-92275090	True	NA	NA	False	AATATA	-19	NA	92293716	92256341	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_93789.nnic	chr9	-	2248	16	NNC	ENSG00000196305.19	novel	4403	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	533.840284063397	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275090	True	NA	-18	True	AATAAA	-12	NA	92293716	92210344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251815_92288217_92288283_92289300_92289427_92293610
transcript_93791.nnic	chr9	-	2166	15	NNC	ENSG00000196305.19	novel	4370	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_12	523.517328134555	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275090	True	NA	-18	True	AATAAA	-12	NA	92293716	92210344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92288217_92288283_92289300_92289427_92293610
transcript_93797.nnic	chr9	-	2057	14	NNC	ENSG00000196305.19	novel	4186	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	533.444761535313	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275090	True	NA	-18	True	AATAAA	-12	NA	92293716	92210344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251815_92293610
transcript_93798.nnic	chr9	-	1965	13	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	147	junction_12	515.860627980078	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275080	True	NA	-18	True	AATAAA	-12	NA	92293706	92210344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92293610
transcript_9380.known	chr1	-	2749	2	FSM	ENSG00000174307.7	ENST00000367311.5	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGATCAATTGGTGAT	-201467462	True	NA	NA	False	NA	NA	NA	201469188	201464277	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201466179_201468340
transcript_93804.nnic	chr9	-	1412	9	NNC	ENSG00000196305.19	novel	4403	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	866.225712141472	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275090	True	NA	-18	True	AATAAA	-12	NA	92293716	92210344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92250186_92250290_92250712_92250835_92251807_92251815_92293610
transcript_9381.known	chr1	-	1820	6	FSM	ENSG00000159176.14	ENST00000340006.7	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	7.88416133777081	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTCCAATCCTGTG	-201505842	True	NA	-1	True	AATAAA	-17	NA	201507123	201483529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201484790_201485282_201485377_201488854_201488985_201490175_201490345_201496191_201496305_201507069
transcript_93812.nic	chr9	-	3000	12	ISM	ENSG00000198000.12	ENST00000544867.5	4598	17	-16	8136	-1	1197	5prime_fragment	FALSE	canonical	0	0	junction_6	55.1847385778063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGAGCTACTTCTTT	-92321613	True	NA	NA	False	AAAAAG	-22	NA	92325354	92305752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_93813.known	chr9	-	3136	13	FSM	ENSG00000198000.12	ENST00000432670.6	3136	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	59.477061404657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAGAAAAGGG	-92321617	True	NA	NA	False	AGTAAA	-3	NA	92325358	92301816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_93814.nic	chr9	-	1673	7	ISM	ENSG00000198000.12	ENST00000544867.5	4598	17	-298	17714	0	53	5prime_fragment	FALSE	canonical	0	0	junction_1	49.337837632209	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTAGAGTCAGCCCTC	-92325591	True	NA	NA	False	ATTAAA	-17	NA	92325636	92315330	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_93815.known	chr9	-	1098	7	FSM	ENSG00000198000.12	ENST00000421075.6	1098	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.3079331296518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCCATTACTCCTT	-92325549	True	NA	NA	False	AATAGA	-43	NA	92325594	92315851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
transcript_93819.known	chr9	+	8293	8	FSM	ENSG00000188312.14	ENST00000375587.8	8293	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	10.7494660522355	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGGGCCTCACACATC	92324897	True	NA	NA	False	AATAAA	-17	NA	92325952	92620529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762_92379860_92611313_92611394_92612522_92612615_92613018
transcript_9382.known	chr1	+	11416	24	FSM	ENSG00000198700.10	ENST00000361565.9	11416	24	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_8	87.5818170009457	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCGTAGTGCTGCCTC	201814733	True	NA	6	True	AATAAA	-17	NA	201829156	201884291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943
transcript_93821.known	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.1280002413551	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	-92667679	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_93827.known	chr9	-	4784	5	FSM	ENSG00000127081.14	ENST00000375495.8	4784	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.51314879522022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGTCTGGATAATAT	-92876225	True	NA	NA	False	ATTAAA	-14	NA	92878038	92844181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92875014_92875060_92877889
transcript_93828.known	chr9	-	2836	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	11.0453610171873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTCTTTCTTGTTTC	-92876209	True	NA	-31	True	AGTAAA	-16	NA	92878022	92846068	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
transcript_93829.known	chr9	+	1196	5	FSM	ENSG00000157303.11	ENST00000375472.8	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	5.54526825320471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTACCTCAGCATCTT	93057890	True	NA	30	True	AATAAA	-39	NA	93058700	93085133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93079470_93079603_93084536
transcript_93831.known	chr9	+	1076	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	35.6931365951495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	93057877	True	NA	29	True	AATAAA	-38	NA	93058687	93085132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
transcript_93832.known	chr9	+	857	6	FSM	ENSG00000165233.18	ENST00000375464.7	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	50.4166639118457	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	93095039	True	NA	25	True	ATTAAA	-17	NA	93096216	93113283	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_93833.known	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	66.6651333156996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	93095137	False	NA	14	True	ATTAAA	-6	NA	93096314	93113272	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_93835.known	chr9	+	660	5	FSM	ENSG00000165233.18	ENST00000468781.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	110.298175415553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	93095100	True	NA	27	True	NA	NA	NA	93096277	93113207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93112217_93112290_93112991
transcript_93838.known	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	16.6799946709291	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-93130030	True	NA	-17	True	AATAAA	-25	NA	93134251	93121495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
transcript_93842.known	chr9	-	1154	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	36.9966214673719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	-93346357	False	NA	-28	True	AATAAA	-17	NA	93346414	93318198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
transcript_93845.known	chr9	-	467	3	FSM	ENSG00000204352.4	ENST00000649569.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGTGCGTGGGTCGC	-93346095	False	NA	NA	False	NA	NA	NA	93346152	93335373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93335661_93335875_93335977_93346073
transcript_93847.known	chr9	+	5160	18	FSM	ENSG00000048828.17	ENST00000277165.11	5160	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	19.4527197198302	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	93450925	True	NA	22	True	AATAAA	-24	NA	93451684	93566112	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93558580_93558719_93561108_93561251_93562207_93562305_93564228
transcript_93848.known	chr9	-	1280	4	FSM	ENSG00000188938.17	ENST00000483056.5	1280	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	133.32249955986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCGCTTCATAGGTTC	-93450774	False	NA	NA	False	NA	NA	NA	93451208	93446923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93450944
transcript_93849.known	chr9	-	1491	4	FSM	ENSG00000188938.17	ENST00000476484.5	1491	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.406116896887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCGCTTCATAGGTTC	-93447829	True	NA	NA	False	NA	NA	NA	93451562	93446923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93451087
transcript_93850.nic	chr9	-	1638	4	NIC	ENSG00000188938.17	novel	1553	4	NA	NA	-756	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	134.219554793215	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATCAAGTGAGTTTTT	-93451910	False	NA	NA	False	AGTAAA	-19	NA	93452344	93446499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_93447698_93448368_93448490_93450478_93450600_93452146
transcript_93851.known	chr9	-	1905	3	FSM	ENSG00000188938.17	ENST00000479094.5	1905	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-93447791	True	NA	NA	False	AGTAAA	-25	NA	93451524	93446493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93450478_93450600_93450944
transcript_93852.known	chr9	-	1800	3	FSM	ENSG00000188938.17	ENST00000423591.5	1800	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-93447829	True	NA	NA	False	AGTAAA	-25	NA	93451562	93446493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93450478_93450600_93451087
transcript_93853.known	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-93453147	True	NA	-19	True	AATAAA	-16	NA	93453581	93443331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93450478_93450600_93452146
transcript_93854.known	chr9	-	1432	3	FSM	ENSG00000188938.17	ENST00000483149.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	-93452823	False	NA	NA	False	NA	NA	NA	93453257	93446904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93450478_93450600_93452739
transcript_93859.known	chr9	+	509	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCGGTTTCGGGTATTT	94165863	True	NA	NA	False	AATAAA	-17	NA	94166289	94200902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94166382_94200485
transcript_93860.known	chr9	+	2275	7	NNC	ENSG00000148110.17	novel	3402	12	NA	NA	-11541	-123	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	157.944082932326	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTGTGTCTTTTTTTT	94446838	True	NA	9	True	AATAAA	-19	NA	94446853	94460919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_94446937_94451455_94451528_94453957_94454071_94456239_94456338_94458314_94458371_94458371_94458465_94459159
transcript_93861.known	chr9	-	1487	8	FSM	ENSG00000165140.12	ENST00000415431.5	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	10.0244598816279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTCTCCCTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	94640249	94603140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140_94639335_94640043
transcript_93865.nic	chr9	-	1253	7	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	7.15697018452796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	-94639934	True	NA	NA	False	AATAAA	-22	NA	94640201	94603132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94640043
transcript_93868.known	chr9	+	1164	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	15	14	-14	-14	multi-exon	FALSE	canonical	3	14	junction_1	13.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	94553773	True	NA	NA	False	NA	NA	NA	94555068	94568127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94555311_94558968_94559153_94567389
transcript_93871.known	chr9	+	3974	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	94553787	True	NA	NA	False	AATAAA	-3	NA	94555082	94570916	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94555346_94558968_94559153_94567389
transcript_93872.nnic	chr9	+	1090	3	NNC	ENSG00000231806.4	novel	1193	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTACAGTTATTTTG	94553762	True	NA	NA	False	NA	NA	NA	94555057	94568141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_94555311_94558883_94558969_94567389
transcript_93873.known	chr9	+	3130	17	FSM	ENSG00000148120.18	ENST00000375315.8	3130	17	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	12.6682427747498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725180	True	NA	14	True	AATAAA	-23	NA	94726698	95087159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94923985_94924176_94928424_94928532_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_93874.nic	chr9	+	2693	14	NIC	ENSG00000148120.18	novel	2820	15	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_7	12.6219495113653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725175	True	NA	14	True	AATAAA	-23	NA	94726693	95087159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_93879.nic	chr9	+	1053	7	NIC	ENSG00000148120.18	novel	919	6	NA	NA	282	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	12.5222025041746	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	95004010	True	NA	14	True	AATAAA	-23	NA	95004198	95087159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_93880.nic	chr9	+	908	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	282	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	13.9370011121475	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	95004010	True	NA	14	True	AATAAA	-23	NA	95004198	95087159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_93886.known	chr9	-	4592	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_14	6.37637540184909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-95317293	True	NA	0	True	AATAAA	-19	NA	95317709	95099053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_93889.nnic	chr9	-	1589	3	NNC	ENSG00000158169.13	novel	1404	2	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCCAGTCTATGGTATT	-95426178	True	NA	-11	True	AATAAA	-15	NA	95426792	95414836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_95416165_95423100_95423293_95426723
transcript_9389.known	chr1	+	1432	5	FSM	ENSG00000198892.7	ENST00000362011.7	1432	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	7.21110255092798	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCACTGCTAACTGTAC	201887876	True	NA	NA	False	NA	NA	NA	201888897	201892587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201889068_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_93890.nnic	chr9	-	1325	2	NNC	ENSG00000158169.13	novel	652	7	NA	NA	-34	4374	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTTTTTGATTCAGT	-95426216	True	NA	2	True	TTTAAA	-21	NA	95426830	95410459	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_95411678_95426723
transcript_93891.known	chr9	-	1404	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTATTCTT	-95426182	True	NA	-8	True	AATAAA	-18	NA	95426796	95414833	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95416165_95426723
transcript_93895.known	chr9	-	962	2	FSM	ENSG00000175611.13	ENST00000670189.2	1384	2	422	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTTAAAGAGTAATT	-95874795	True	NA	NA	False	AATAAA	-13	NA	95875587	95870087	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95870442_95874979
transcript_93897.known	chr9	-	1148	2	FSM	ENSG00000175611.13	ENST00000671508.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATCATACTGCATAT	-95874669	True	NA	36	True	NA	NA	NA	95875461	95870246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95870442_95874508
transcript_93899.known	chr9	+	4564	14	FSM	ENSG00000182150.19	ENST00000288985.12	4564	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.2697349343253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTCTGCATTCTATA	95872703	True	NA	NA	False	AATAAA	-18	NA	95875700	95968840	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561
transcript_93900.known	chr9	+	2186	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	95872710	True	NA	NA	False	AAAAAG	-16	NA	95875707	95882677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_95876085_95880868
transcript_93902.known	chr9	-	654	1	FSM	ENSG00000286835.1	ENST00000658405.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTGTAATGAATGAAT	-96417285	False	1127	NA	False	AATAAA	-14	NA	96417377	96416723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96416700_96417400
transcript_93905.known	chr9	-	2547	13	FSM	ENSG00000081377.17	ENST00000375240.7	2547	13	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	49.9263346230112	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGAATATATAGTA	-96615684	False	NA	NA	False	NA	NA	NA	96619378	96502585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96503790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
transcript_93906.known	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_6	22.5352331848126	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	96448649	True	NA	4	True	AATAAA	-20	NA	96450168	96491336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
transcript_93907.known	chr9	-	2723	6	FSM	ENSG00000158122.12	ENST00000446045.1	2723	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	18.8616012045637	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-96653815	True	NA	3	True	AATAAA	-21	NA	96655303	96639576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655251
transcript_93908.known	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	11.1247471881387	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-96777389	True	NA	3	True	AATAAA	-20	NA	96778087	96754552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_93912.known	chr9	+	841	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	54	2	17	0	multi-exon	FALSE	canonical	2	10	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
transcript_93915.known	chr9	+	1299	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	2	0	2	0	multi-exon	FALSE	canonical	2	17	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACTGTATTAATAA	96686694	True	NA	NA	False	AATAAA	-2	NA	96687049	96774318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96687325_96720965_96721131_96773459
transcript_93916.known	chr9	+	766	2	FSM	ENSG00000224848.3	ENST00000653137.2	785	2	17	2	17	0	multi-exon	TRUE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96687325_96773459
transcript_93918.known	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	366.579779004516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-97033143	True	NA	0	True	AGTAAA	-19	NA	97039142	97029676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
transcript_93923.known	chr9	-	4481	8	FSM	ENSG00000136943.12	ENST00000680385.1	4481	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	304.589586700745	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-97033143	True	NA	0	True	AGTAAA	-19	NA	97039142	97029676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036400_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_93926.known	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	290.418768719396	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033141	True	NA	NA	False	AATAAA	-19	NA	97039140	97032654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
transcript_93927.known	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	1	29	junction_4	297.075747916251	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033140	True	NA	NA	False	AATAAA	-19	NA	97039139	97032654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_93931.known	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	49.8029450267083	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033175	True	NA	NA	False	AATAAA	-19	NA	97039174	97032654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
transcript_93932.known	chr9	-	1541	7	FSM	ENSG00000136943.12	ENST00000680787.1	1541	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	397.481830472231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTTATGATATCAAAGAC	-97033140	True	NA	NA	False	NA	NA	NA	97039139	97032761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037657_97038054_97038937
transcript_93933.known	chr9	-	4172	7	FSM	ENSG00000136943.12	ENST00000538255.6	4172	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	329.77753444136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-97033103	True	NA	0	True	AGTAAA	-19	NA	97039102	97029676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037492_97037616_97037917_97038054_97039070
transcript_93935.known	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	54.5475938974397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	-97033140	True	NA	NA	False	AAAAAG	-12	NA	97039139	97032685	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
transcript_93938.known	chr9	+	3161	16	FSM	ENSG00000254876.5	ENST00000375204.2	3161	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	14.3548675445725	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTGAGTATGAATTCA	97237934	True	NA	NA	False	AATAAA	-23	NA	97238482	97297314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_97238568_97246095_97246187_97250791_97250844_97251540_97251558_97276568_97276698_97277555_97277627_97279361_97279474_97281515_97281670_97287659_97287736_97290583_97290666_97290853_97290903_97291370_97291488_97292555_97292676_97293946_97294111_97294844_97294992_97295619
transcript_93967.nnic	chr9	+	1026	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-96	5045	multi-exon	FALSE	canonical	3	156	junction_1	373	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	27	True	AATAAA	-18	NA	97214737	97219974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217104_97217364_97219583
transcript_93969.nnic	chr9	+	1043	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-96	5045	multi-exon	FALSE	canonical	3	156	junction_1	135.5	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	27	True	AATAAA	-18	NA	97214737	97219974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217104_97217381_97219583
transcript_93971.nnic	chr9	+	893	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-92	5045	multi-exon	FALSE	canonical	3	186	junction_1	358	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	27	True	AATAAA	-18	NA	97214741	97219974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217233_97217364_97219583
transcript_93974.nnic	chr9	+	910	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-92	5045	multi-exon	FALSE	canonical	3	186	junction_1	120.5	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	27	True	AATAAA	-18	NA	97214741	97219974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217233_97217381_97219583
transcript_93976.nnic	chr9	+	1801	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-69	5045	multi-exon	FALSE	canonical	3	55	junction_1	423.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	97213855	True	NA	27	True	AATAAA	-18	NA	97214764	97219974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97216302_97217364_97219583
transcript_93990.nnic	chr9	+	794	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-123	5045	multi-exon	FALSE	canonical	3	906	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	27	True	AATAAA	-18	NA	97214710	97219974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97219583
transcript_93992.known	chr9	-	578	2	FSM	ENSG00000203279.5	ENST00000366109.2	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTACTTCGAGCTCCG	-97236947	True	NA	NA	False	AATAAA	-28	NA	97238678	97237763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97238086_97238422
transcript_93993.nnic	chr9	+	1241	3	NNC	ENSG00000136842.14	novel	3259	10	NA	NA	31100	-1093	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCTTGGAATTTTGAAA	NA	False	NA	NA	False	AATAAA	-23	NA	97586534	97600161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_97587103_97591290_97591436_97599633
transcript_93994.known	chr9	-	4116	10	FSM	ENSG00000136925.15	ENST00000341170.5	4116	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	9.42547113797711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	-97631227	True	NA	-4	True	AATAAA	-25	NA	97633368	97600079	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97602768_97604726_97604866_97605482_97605642_97606142_97606262_97610345_97610452_97611573_97611700_97617756_97617878_97625680_97625998_97627397_97627613_97633242
transcript_93995.known	chr9	+	4983	23	FSM	ENSG00000136937.13	ENST00000375147.8	4983	23	0	0	0	0	multi-exon	TRUE	canonical	3	359	junction_4	44.5683614571504	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTTTCCTAATTTA	97633075	True	NA	5	True	AGTAAA	-1	NA	97633820	97673748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_97633916_97640793_97640883_97641561_97641663_97643203_97643361_97645116_97645225_97645610_97645733_97647491_97647562_97648007_97648224_97650502_97650601_97651309_97651374_97653797_97653909_97654879_97654945_97655701_97655765_97656010_97656086_97658639_97658744_97660945_97661069_97662041_97662145_97662953_97663048_97664339_97664444_97666762_97666878_97668845_97668975_97669592_97669707_97671085
transcript_93997.nnic	chr9	-	1147	7	NNC	ENSG00000136936.11	novel	1400	6	NA	NA	0	20511	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	21.8072363117282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGCTTTCTATGTATG	-97696303	True	NA	NA	False	AATAAA	-15	NA	97697340	97654397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_97654725_97675488_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_93999.known	chr9	-	1400	6	FSM	ENSG00000136936.11	ENST00000375128.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.44580418759451	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696303	True	NA	1	True	AATAAA	-22	NA	97697340	97674908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_9400.known	chr1	+	1650	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	100.041991183702	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	201952190	True	NA	NA	False	CATAAA	-18	NA	201955502	201970664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
transcript_94001.nic	chr9	-	1361	6	NIC	ENSG00000136936.11	novel	1400	6	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	22.8157840101979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696367	True	NA	1	True	AATAAA	-22	NA	97697404	97674908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697223
transcript_94009.known	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	9.12071817347735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	-97921979	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
transcript_94012.nic	chr9	-	1445	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	10.8423039781937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	-97922022	True	NA	42	True	ATTAAA	-15	NA	97922543	97904488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
transcript_94015.known	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	54.0986752764489	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	97970670	True	NA	12	True	AATAAA	-19	NA	97983340	98015943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
transcript_94021.known	chr9	+	1179	6	FSM	ENSG00000095380.11	ENST00000210444.6	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_3	93.4931013497788	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	98045754	True	NA	20	True	AATAAA	-16	NA	98056731	98083077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_98056941_98060781_98060998_98076917_98077018_98078192_98078348_98080815_98081083_98082845
transcript_94031.known	chr9	+	649	2	FSM	ENSG00000095380.11	ENST00000480925.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCAGGAGTTCGAGAC	98045792	True	NA	NA	False	NA	NA	NA	98056769	98061259	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_98056941_98060781
transcript_94032.known	chr9	-	5456	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	0	0	0	multi-exon	TRUE	canonical	3	326	junction_1	35.4922876036308	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	-98189409	True	NA	-4	True	AATAAA	-22	NA	98192637	98120974	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_94033.known	chr9	-	1938	2	FSM	ENSG00000285706.1	ENST00000647710.1	1938	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCATGGTGAATTGACT	-98807512	True	NA	NA	False	AATAAA	-7	NA	98807564	98798465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98799610_98806770
transcript_94037.known	chr9	+	587	4	FSM	ENSG00000106803.10	ENST00000498603.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	1534.41114293254	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	99222031	False	NA	21	True	AATAAA	-19	NA	99222063	99230615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99222172_99222545_99222644_99227898_99228001_99230336
transcript_94038.known	chr9	+	564	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	3157	junction_2	98.6204846875131	3877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	99181611	True	NA	21	True	AATAAA	-19	NA	99222281	99230615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
transcript_94041.known	chr9	-	1652	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGCCCAGGTTGGAGT	-99906299	True	NA	NA	False	NA	NA	NA	99906601	99885217	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_99886696_99894879_99895006_99906553
transcript_94043.known	chr9	+	6885	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	10.842094834863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	99905529	True	NA	5	True	AATAAA	-18	NA	99906653	99974534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_94050.known	chr9	+	941	7	FSM	ENSG00000136874.11	ENST00000524405.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	21.2994522621279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGGAACACAAGTATATC	99905571	True	NA	NA	False	NA	NA	NA	99906695	99968748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99960104_99960156_99967652_99967740_99968433
transcript_94052.nic	chr9	+	728	4	ISM	ENSG00000136874.11	ENST00000524405.5	941	7	-43	17266	-1	298	5prime_fragment	FALSE	canonical	3	40	junction_1	13.0213499897497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATGGAGTGGGACTTC	99905528	True	NA	NA	False	AATAAA	-14	NA	99906652	99951482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059
transcript_94054.known	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	36.643468744824	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	-100090501	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
transcript_94060.known	chr9	+	1654	4	FSM	ENSG00000119509.13	ENST00000374921.3	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	14.2361043360417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTGTTTTATAAAA	100098085	True	NA	NA	False	ATTAAA	-33	NA	100099287	100130903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675
transcript_94063.nic	chr9	+	590	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-61	4251	-16	-4251	5prime_fragment	FALSE	canonical	3	50	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCATAGGTTTTATATA	100098024	True	NA	NA	False	AATAAA	-16	NA	100099226	100126652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_94064.nic	chr9	+	824	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-61	4017	-16	-4017	5prime_fragment	FALSE	canonical	3	50	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGTGGTTGGGTTTAA	100098024	True	NA	NA	False	AATAAA	-26	NA	100099226	100126886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_94068.nnic	chr9	-	2846	16	NNC	ENSG00000136891.14	novel	3077	15	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_13	161.561326505517	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	NA	False	NA	-14	True	ATTAAA	-18	NA	100352999	100302083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100346879_100347166_100347407_100349183_100349373_100352771
transcript_9407.nic	chr1	+	1940	10	NIC	ENSG00000176393.11	novel	958	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	240.457639810445	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACGGATTGAGTGACTAT	201983256	True	NA	12	True	AATAAA	-20	NA	201983360	202006143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_201983517_201988903_201989045_201996146_201996264_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_94072.known	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_12	52.3988335280666	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-100339212	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_94083.nnic	chr9	-	2759	13	NIC	ENSG00000136891.14	novel	3077	15	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_8	185.209097298762	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	NA	False	NA	-14	True	ATTAAA	-18	NA	100352999	100302083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_94089.known	chr9	+	786	4	FSM	ENSG00000066697.15	ENST00000374885.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	100.910301203043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTGCTTTAAAAAAGAT	100427225	False	NA	NA	False	AATAAA	-25	NA	100427276	100450705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100427394_100441905_100442357_100445168_100445238_100450556
transcript_9409.known	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_3	4.51213641194501	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	202010310	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_94091.nic	chr9	+	1826	4	NIC	ENSG00000066697.15	novel	1880	3	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	122.893811434461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	100427055	True	NA	NA	False	ATTAAA	-21	NA	100427353	100451734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_100427394_100429505_100429663_100441905_100442357_100450556
transcript_94092.known	chr9	+	1880	3	FSM	ENSG00000066697.15	ENST00000395067.7	1880	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	30	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	100427142	100451734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100427394_100441905_100442357_100450556
transcript_94096.known	chr9	+	1755	3	FSM	ENSG00000066697.15	ENST00000613183.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	124.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	100429337	False	NA	NA	False	AAGAAA	-42	NA	100429513	100451711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100429663_100441905_100442357_100450556
transcript_94097.known	chr9	+	2575	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_9	38.2499899136596	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGTTTTGGTGTGT	100468916	True	NA	23	True	AATATA	-15	NA	100473148	100577636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
transcript_94099.known	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1170	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-101388607	True	NA	-10	True	AATAAA	-16	NA	101398618	101387632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_101390851_101398500
transcript_941.known	chr1	+	626	4	FSM	ENSG00000251503.8	ENST00000470413.6	626	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	101.929169306708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	10428114	True	NA	7	True	AATAAA	-16	NA	10430383	10451659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10451376
transcript_94102.known	chr9	+	3115	4	FSM	ENSG00000136870.11	ENST00000259395.4	3115	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	101398353	False	NA	22	True	ATTAAA	-23	NA	101399027	101410660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101399190_101399394_101399531_101399925_101400011_101407928
transcript_94103.known	chr9	+	3134	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	101398198	True	NA	22	True	ATTAAA	-23	NA	101398872	101410660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101399190_101399925_101400011_101407928
transcript_94104.known	chr9	+	3192	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTAAGAGTTGTTA	101398176	True	NA	16	True	ATTAAA	-17	NA	101398850	101410654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101399190_101399883_101400011_101407928
transcript_94105.known	chr9	-	4225	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGAAGACTTTTATC	-101484301	True	NA	-17	True	AATAAA	-21	NA	101487173	101473169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_101477170_101486948
transcript_94107.known	chr9	+	476	1	FSM	ENSG00000225376.6	ENST00000666720.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTTGTCCTATCTTTG	NA	False	NA	NA	False	AATAAA	-26	NA	101468348	101468824	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101468300_101468800
transcript_94109.known	chr9	+	3938	20	FSM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_4	41.3653407183161	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	101529298	True	NA	28	True	ATTAAA	-18	NA	101533852	101563344	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
transcript_9411.known	chr1	-	5296	2	FSM	ENSG00000234678.2	ENST00000419190.2	5296	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTATTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202010463	201995695	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202000328_202009799
transcript_94113.known	chr9	+	5928	25	FSM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	44.3886716028613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	104090575	True	NA	9	True	AATAAA	-14	NA	104094308	104141419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_94117.nnic	chr9	+	2630	18	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	0	-14568	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	47.1499118435147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATGAAAGAAAAACAAC	104090575	True	NA	4	True	AAAACA	-21	NA	104094308	104125083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_94118.nic	chr9	+	2555	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-26	16466	-13	-14698	5prime_fragment	FALSE	canonical	3	97	junction_1	37.2460257743851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCAGAAGAAAAATAT	104090549	True	NA	NA	False	ACTAAA	-11	NA	104094282	104124953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_94119.nnic	chr9	+	2564	18	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	-13	-14698	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	48.4922852637799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCAGAAGAAAAATAT	104090549	True	NA	NA	False	ACTAAA	-11	NA	104094282	104124953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_9412.known	chr1	-	1789	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	60.2035897785358	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-202138779	True	NA	-3	True	AATAAA	-20	NA	202144737	202133403	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_94124.nic	chr9	+	1299	10	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-26	29816	-13	9410	5prime_fragment	FALSE	canonical	3	97	junction_1	46.0750863292399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAGAGGTTAAAAAGA	104090549	True	NA	7	True	NA	NA	NA	104094282	104111603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580
transcript_94125.known	chr9	+	4266	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	53.3648344469985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	104093810	True	NA	9	True	ATTAAA	-16	NA	104094563	104139651	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_94129.nnic	chr9	+	1296	8	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	-176	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	67.6711737381733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	104094051	True	NA	NA	False	AATAGA	-26	NA	104094083	104102193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_94131.nic	chr9	+	1126	8	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-26	39226	-13	0	5prime_fragment	FALSE	canonical	3	97	junction_1	52.0713795806158	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	104090549	True	NA	NA	False	AATAGA	-26	NA	104094282	104102193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_94132.nnic	chr9	+	1135	8	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	69.7561349799926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	104090549	True	NA	NA	False	AATAGA	-26	NA	104094282	104102193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_94138.known	chr9	+	1636	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	14.7512711316686	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	104746608	True	NA	5	True	AATAAA	-14	NA	104747682	104760120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
transcript_94141.nic	chr9	+	1743	5	ISM	ENSG00000136783.10	ENST00000374767.5	1636	6	-18	1	-18	-1	intron_retention	FALSE	canonical	3	99	junction_3	11.5839328382031	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGGTTCTTTTTGTTG	104746590	True	NA	4	True	AATAAA	-13	NA	104747664	104760119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084
transcript_94145.nnic	chr9	-	1180	3	NNC	ENSG00000286536.1	novel	2813	8	NA	NA	-5941	-172448	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTAGTTCCCAACA	-105244839	True	NA	NA	False	AAAAAG	-1	NA	105245162	105198379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_105199359_105226596_105226654_105245018
transcript_94146.known	chr9	+	10482	16	FSM	ENSG00000070214.16	ENST00000374720.8	10482	16	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_2	24.3261176516106	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	105238666	True	NA	7	True	AATAAA	-21	NA	105244650	105397346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
transcript_94149.known	chr9	+	1836	4	FSM	ENSG00000106701.13	ENST00000469022.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCACTATATCACTT	105447449	True	NA	NA	False	AAAACA	-6	NA	105448044	105473320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903
transcript_94150.known	chr9	+	1711	13	FSM	ENSG00000106701.13	ENST00000484973.5	1711	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.38669072941729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTTTTATCATTAAAC	105447527	True	NA	NA	False	NA	NA	NA	105448122	105546602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903_105472006_105479353_105479377_105484380_105484503_105506398_105506609_105508616_105508716_105512806_105512937_105534495_105534594_105535066_105535319_105539262_105539352_105546357
transcript_9416.known	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	485.39502813001	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	-202327484	True	NA	-14	True	AATATA	-14	NA	202341959	202331737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
transcript_94160.known	chr9	+	3545	6	FSM	ENSG00000095209.12	ENST00000374692.8	3545	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_5	31.230754073509	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGGTAATATTCATT	105691325	True	NA	NA	False	AATAAA	-34	NA	105694540	105776629	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105773864
transcript_94164.nnic	chr9	+	2628	5	NIC	ENSG00000095209.12	novel	3545	6	NA	NA	-14	-796	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	124.788821614758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTATTACATTATTTTT	105691311	True	NA	NA	False	ATTAAA	-35	NA	105694526	105775816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105773864
transcript_94168.known	chr9	+	4114	10	FSM	ENSG00000119318.13	ENST00000358015.8	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12.0287720913105	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	107249376	True	NA	12	True	TATAAA	-15	NA	107283278	107332189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
transcript_94171.known	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	148.401659253311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-109005391	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_94174.known	chr9	-	2454	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_11	66.3156499787099	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	-109005368	True	NA	-8	True	AATAAA	-18	NA	109013499	108942576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_94186.known	chr9	+	1901	6	FSM	ENSG00000119328.12	ENST00000322940.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	10.0677703589226	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	108934366	False	NA	NA	False	AATAAA	-19	NA	108934399	108940954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_94187.nnic	chr9	+	1771	5	NIC	ENSG00000119328.12	novel	1901	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	67.1355904122396	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	108934366	False	NA	NA	False	AATAAA	-19	NA	108934399	108940954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_108934566_108935637_108935690_108939195_108939273_108939384_108939455_108939548
transcript_94189.known	chr9	-	7999	18	FSM	ENSG00000106771.13	ENST00000374586.8	7999	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	94.2269585797153	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGTGTGTTGAAAAAC	-109115796	True	NA	2	True	AATAAA	-37	NA	109119947	109015134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109085996_109086021_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
transcript_94190.nic	chr9	-	1161	5	ISM	ENSG00000106771.13	ENST00000413712.6	1973	12	36923	0	-11043	0	3prime_fragment	FALSE	canonical	3	279	junction_1	15.644487847162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGTGGCTTATTTGA	-109050354	False	NA	-18	True	AATAAA	-13	NA	109050370	109019903	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282
transcript_94195.known	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7766	junction_4	217.071992666028	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	-110208292	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
transcript_94196.known	chr9	-	635	4	FSM	ENSG00000136810.13	ENST00000374515.9	635	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3803.90965542909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTGACAGAGAAAATA	-110208251	True	NA	NA	False	AATAAA	-21	NA	110256466	110243810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_110244220_110244777_110244844_110251357_110251463_110256411
transcript_94203.nic	chr9	-	1358	11	NIC	ENSG00000106853.20	novel	1941	11	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	143.088643854081	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTAGTGATGGAGGAT	-111599389	False	NA	-41	True	AATAAA	-17	NA	111599441	111562971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_94205.known	chr9	-	1941	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	159.076836780218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCCGGGCGTGGTGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	111599893	111562576	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_94208.known	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	45.9720795566769	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	-111596475	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_94210.known	chr9	-	1599	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	103.618960083997	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	-111598882	True	NA	NA	False	AATAAA	-34	NA	111599647	111562566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_94217.known	chr9	+	1239	6	FSM	ENSG00000173258.13	ENST00000355824.7	1239	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	21.7494827524702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAT	111514287	True	NA	NA	False	NA	NA	NA	111525188	111539761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111539445
transcript_94219.known	chr9	+	2433	6	FSM	ENSG00000173258.13	ENST00000358151.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	20.6106768447812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAAAGGAAT	111514257	True	NA	NA	False	NA	NA	NA	111525158	111577844	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111576364
transcript_9422.known	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_5	128.543533481852	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-202327505	True	NA	-16	True	AATAAA	-18	NA	202341980	202331656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
transcript_94220.known	chr9	-	847	4	FSM	ENSG00000106853.20	ENST00000374308.1	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	51.227162933567	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGTATACAGAGATAAG	-111596475	True	NA	NA	False	NA	NA	NA	111599407	111592366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599338
transcript_94221.known	chr9	-	1061	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	167.572869721404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACACAGTCTTTCCAT	-111599764	False	NA	NA	False	AATATA	-37	NA	111599816	111592297	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
transcript_94224.known	chr9	+	800	2	FSM	ENSG00000173258.13	ENST00000374374.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTGTAGTTTTCTTG	111514314	True	NA	NA	False	AAAAAG	-9	NA	111525215	111528020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111525263_111527267
transcript_94229.known	chr9	+	1201	3	FSM	ENSG00000242616.4	ENST00000374293.5	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	110.5	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	111654709	True	NA	15	True	AATAAA	-17	NA	111661604	111670226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111661716_111666814_111666947_111669268
transcript_94231.nic	chr9	+	1102	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-40	-136	combination_of_known_splicesites	FALSE	canonical	3	178	junction_2	192	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTTAACTTCACAAGT	111654669	True	NA	NA	False	ATTAAA	-30	NA	111661564	111670090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_94232.nic	chr9	+	1241	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-40	3	combination_of_known_splicesites	FALSE	canonical	3	178	junction_2	192	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGACAGCAATAT	111654669	True	NA	18	True	AATAAA	-20	NA	111661564	111670229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_94235.known	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_4	28.1044369272896	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	111894601	True	NA	9	True	AATAAA	-20	NA	111896813	111935369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_94238.known	chr9	-	3015	17	FSM	ENSG00000106868.17	ENST00000374270.8	3015	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	4.08837911035657	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTCTTCCCTTGGTTA	-112174900	True	NA	-1	True	AGTAAA	-17	NA	112175297	112040782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112041493_112041866_112041961_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_94240.known	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	46.9637906597848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	-112319790	True	NA	-3	True	AATAAA	-28	NA	112333619	112218434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
transcript_94245.known	chr9	-	2755	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_11	64.2527020616427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTTTTCAATAAGTAA	-112319749	True	NA	NA	False	TTTAAA	-21	NA	112333578	112222660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
transcript_94249.known	chr9	+	3174	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	11.1986606342009	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378968	True	NA	12	True	AATAAA	-18	NA	112380107	112472405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_94257.known	chr9	+	2983	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	34.0330721504833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378940	True	NA	12	True	AATAAA	-18	NA	112380079	112472405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_94270.nic	chr9	-	1177	6	NIC	ENSG00000148153.14	novel	964	6	NA	NA	-11	130	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	89.0743509659206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	-112716970	True	NA	-79	True	AATAAA	-18	NA	112718128	112686966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112687634_112689526_112689618_112694130_112694234_112701787_112701881_112716460_112716542_112717986
transcript_94271.known	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	13.8021737418423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-112716959	True	NA	0	True	AATAAA	-31	NA	112718117	112683925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
transcript_94273.known	chr9	-	879	5	FSM	ENSG00000148153.14	ENST00000481146.6	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	70.104832215761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATTGCATCCATATT	-112716928	True	NA	-5	True	AAGAAA	-35	NA	112718086	112687131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112687634_112694130_112694234_112701787_112701881_112716460_112716542_112717986
transcript_94275.known	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	84.581321815162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-112716991	True	NA	10	True	AATGAA	-27	NA	112718149	112687116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
transcript_94276.nnic	chr9	-	981	4	NIC	ENSG00000148153.14	novel	4114	5	NA	NA	-11	130	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	87.8900828686984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	-112716970	True	NA	-79	True	AATAAA	-18	NA	112718128	112686966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112687634_112689526_112689618_112716460_112716542_112717986
transcript_94277.nic	chr9	-	993	4	NIC	ENSG00000148153.14	novel	4114	5	NA	NA	-11	130	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	69.0909223817106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	-112716970	True	NA	-79	True	AATAAA	-18	NA	112718128	112686966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112687634_112694130_112694234_112716460_112716542_112717986
transcript_94278.known	chr9	-	713	3	FSM	ENSG00000148153.14	ENST00000374234.1	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAATAGGCTTAAATCAA	-112716949	True	NA	-18	True	AAGAAA	-22	NA	112718107	112687144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112687634_112694130_112694234_112717986
transcript_9428.known	chr1	-	254	1	FSM	ENSG00000236439.4	ENST00000422457.2	254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCTGAGTCAAGAT	NA	False	NA	NA	False	NA	NA	NA	202472117	202471863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202471900_202472100
transcript_94280.nnic	chr9	+	916	2	NNC	ENSG00000148158.17	novel	7700	9	NA	NA	-34900	-61315	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGCGCTTATTTTTTTT	112803656	True	NA	NA	False	AATAAA	-14	NA	112803684	112805210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_112804166_112804775
transcript_94282.known	chr9	-	2414	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	38.0090449761632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGGAAAGCCTGCA	-113008633	True	NA	84	True	NA	NA	NA	113012227	112997119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
transcript_94288.nnic	chr9	-	1182	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	2	-1143	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	82.5321486183145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGGAATCTGAGAAAAT	-113008631	True	NA	-7	True	AATAAA	-25	NA	113012225	112998262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112999139_112999664_112999815_113001993_113002074_113012149
transcript_94289.nnic	chr9	-	1119	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	2	-1143	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	85.1756355355737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGGAATCTGAGAAAAT	-113008631	True	NA	-7	True	AATAAA	-25	NA	113012225	112998262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112999139_113001993_113002074_113011140_113011228_113012149
transcript_9429.known	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	9.61769203083567	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	-202709352	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
transcript_94291.nnic	chr9	-	310	3	NIC	ENSG00000228623.7	novel	407	4	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGTTTTCCTGAGTT	-113008631	True	NA	-16	True	AATAAA	-14	NA	113012225	112999660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112999815_113001993_113002074_113012149
transcript_94292.known	chr9	-	2451	4	FSM	ENSG00000136866.14	ENST00000555206.5	2451	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.59966329107444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTTTTAAAAGGGTT	-113055581	True	NA	NA	False	NA	NA	NA	113056759	113042240	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113044269_113049361_113049497_113049790_113049876_113056556
transcript_94294.known	chr9	-	1969	4	FSM	ENSG00000136866.14	ENST00000553380.1	1969	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTGTTGAACCTTGG	-113055510	True	NA	NA	False	GATAAA	-44	NA	113056688	113042693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113044269_113049361_113049497_113049790_113049918_113056556
transcript_94297.known	chr9	+	1723	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.08248290463863	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	113150805	True	NA	18	True	ATTAAA	-44	NA	113151006	113164140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
transcript_94298.nic	chr9	-	679	4	FSM	ENSG00000119321.10	ENST00000493847.2	2983	4	-95	2399	0	618	multi-exon	FALSE	canonical	3	39	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATTGTTAAATTTGACC	-113220246	True	NA	NA	False	AAAACA	-13	NA	113221398	113206308	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113206579_113207211_113207297_113211476_113211593_113221190
transcript_94299.known	chr9	+	4762	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_4	32.962099447699	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	113212813	True	NA	11	True	AATAAA	-22	NA	113221543	113264492	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
transcript_94309.nnic	chr9	-	853	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	565.945227031733	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261627	True	NA	-50	True	AATAAA	-33	NA	113275582	113266991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
transcript_94312.known	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	225.04271199535	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261617	True	NA	-50	True	AATAAA	-33	NA	113275572	113266991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
transcript_94315.known	chr9	+	475	2	FSM	ENSG00000136868.11	ENST00000496650.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTTCTAGTTTCTG	113212856	True	NA	NA	False	AATAAA	-16	NA	113221586	113227660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113221679_113227277
transcript_94318.known	chr9	+	2897	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	28.3129175779387	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	113268493	True	NA	28	True	TATAAA	-38	NA	113275657	113292905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_94324.known	chr9	-	849	2	FSM	ENSG00000165188.14	ENST00000416588.2	849	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACGAAAAGCTTGAA	NA	False	NA	NA	False	TTTAAA	-8	NA	113298865	113297442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113298222_113298795
transcript_94325.known	chr9	-	913	3	FSM	ENSG00000119431.10	ENST00000485934.1	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	20	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGACCTCCGAGGCTG	-113376145	True	NA	NA	False	NA	NA	NA	113376925	113373887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113374530_113375452_113375527_113376728
transcript_94326.known	chr9	-	3129	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.45112345213971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-113401269	False	4920	-5	True	AATAAA	-43	NA	113401284	113386311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_94328.known	chr9	-	3247	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	23.9900116956417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	-113401228	False	NA	-12	True	AATAAA	-36	NA	113401243	113386318	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
transcript_94329.known	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	161.318590063266	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-113410660	False	NA	-4	True	AATAAA	-16	NA	113410675	113407234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
transcript_94332.known	chr9	+	1503	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.8397416943394	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	113593213	True	NA	9	True	AATAAA	-18	NA	113594128	113597729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_94333.known	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	2.29868454061969	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-114078194	False	NA	2	True	AATAAA	-24	NA	114078300	114060126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_94335.nnic	chr9	+	759	6	NNC	ENSG00000228278.5	novel	759	6	NA	NA	-2667	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.0591260281974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCTGTTAGTCATTTG	114327130	True	NA	NA	False	AATAAA	-19	NA	114327201	114333251	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_114327352_114330433_114330577_114330791_114330863_114331566_114331675_114331825_114331930_114333068
transcript_94338.known	chr9	+	1563	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_2	20.5	2832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	114561391	True	NA	19	True	AATACA	-32	NA	114587768	114598879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114587921_114592551_114592653_114597569
transcript_94339.known	chr9	+	1385	3	FSM	ENSG00000136888.8	ENST00000678234.1	1385	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1287.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCACACATATCACATA	114561384	True	NA	-50	True	NA	NA	NA	114587761	114598496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114588119_114592551_114592653_114597569
transcript_9434.known	chr1	+	634	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	69	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	202809860	True	NA	23	True	NA	NA	NA	202810961	202811913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202811371_202811688
transcript_94340.known	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	114561374	True	NA	23	True	AGTAAA	-20	NA	114587751	114598378	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114587921_114597569
transcript_94341.known	chr9	+	1136	3	FSM	ENSG00000136888.8	ENST00000677115.1	1136	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1311	2788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTCCCTGTCT	114587622	True	NA	29	True	AGTAAA	-26	NA	114587705	114598384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114587921_114592551_114592658_114597569
transcript_94343.nnic	chr9	-	870	3	NNC	ENSG00000228714.4	novel	711	3	NA	NA	-100253	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGGCCTTGGCAAAAAA	-115844006	True	NA	NA	False	TATAAA	-36	NA	115844583	115641465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_115641982_115741461_115741563_115844330
transcript_94344.known	chr9	-	1757	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	26.4338797757726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686220	True	NA	-5	True	ATTAAA	-18	NA	116687234	116425227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_94345.nnic	chr9	-	1763	9	NNC	ENSG00000148219.18	novel	1757	9	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.2898218205982	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	NA	False	NA	-5	True	ATTAAA	-18	NA	116687274	116425227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_116425627_116425909_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_94346.nic	chr9	-	2046	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-40	0	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	NA	False	NA	-5	True	ATTAAA	-18	NA	116687274	116425227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_94347.nic	chr9	-	1663	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-40	-21	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTCTCTCCTTTTTA	NA	False	NA	-2	True	NA	NA	NA	116687274	116425610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_9435.known	chr1	+	748	2	FSM	ENSG00000228288.8	ENST00000417262.5	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	202809860	True	NA	23	True	NA	NA	NA	202810961	202811913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202811371_202811574
transcript_94350.known	chr9	+	699	3	FSM	ENSG00000119401.11	ENST00000411410.1	699	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAGGACCTTCAGGCAA	116686152	True	NA	NA	False	NA	NA	NA	116687342	116698260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_116687382_116697372_116697434_116697661
transcript_94352.known	chr9	+	3715	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	116686114	True	NA	3	True	ATTAAA	-15	NA	116687304	116701299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_116687382_116697661
transcript_94354.known	chr9	+	3688	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	116686139	True	NA	4	True	ATTAAA	-16	NA	116687329	116701300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_116687382_116697664
transcript_94357.known	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	8.87095696929144	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	-119368034	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_94360.known	chr9	-	9142	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	43.3843760083357	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCGTTGAAGTGTTCT	-120785859	True	NA	2	True	NA	NA	NA	120793416	120756973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
transcript_94361.nnic	chr9	-	1951	8	NNC	ENSG00000119402.18	novel	9142	8	NA	NA	-13	-1740	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	54.4531253202501	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTTTCTTTTGAAGT	-120785872	True	NA	-16	True	ATTAAA	-14	NA	120793429	120764171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793359
transcript_94362.nic	chr9	-	1791	8	ISM	ENSG00000119402.18	ENST00000684405.1	8325	9	-30	11169	4	-1797	5prime_fragment	FALSE	canonical	3	39	junction_6	64.4043350043065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAATTGGTTGCCTAT	-120785855	True	NA	-8	True	AGTAAA	-22	NA	120793412	120764228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148_120793258_120793353
transcript_94365.nnic	chr9	-	1894	8	NNC	ENSG00000119402.18	novel	9142	8	NA	NA	-13	-1797	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	54.4531253202501	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAATTGGTTGCCTAT	-120785872	True	NA	-8	True	AGTAAA	-22	NA	120793429	120764228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793359
transcript_94366.nic	chr9	-	1895	7	ISM	ENSG00000119402.18	ENST00000684405.1	8325	9	19	11112	4	-1740	intron_retention	FALSE	canonical	3	39	junction_6	59.0802185356674	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTTTCTTTTGAAGT	-120785806	True	NA	-16	True	ATTAAA	-14	NA	120793363	120764171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148
transcript_94367.known	chr9	-	8498	8	FSM	ENSG00000119402.18	ENST00000684047.1	8498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.0833822512918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAAGTTAGCCGGGC	-120785810	True	NA	NA	False	ACTAAA	-2	NA	120793367	120753059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120753115_120757719_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148
transcript_94373.known	chr9	+	430	2	FSM	ENSG00000214654.9	ENST00000437707.2	3574	2	48	3096	48	-87	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATGCCTTGCTTTTT	120792727	True	NA	NA	False	NA	NA	NA	120793550	120798632	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_120793923_120798574
transcript_94378.nic	chr9	-	1650	10	NIC	ENSG00000095261.14	novel	569	4	NA	NA	-12	75	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	162.66514874823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTTGTACTCCCCTTT	-120835418	True	NA	NA	False	NA	NA	NA	120842934	120815420	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_120815789_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_94379.known	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	67.1284010104682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	-120835406	True	NA	19	True	AATAAA	-35	NA	120842922	120816052	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_9438.known	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	60	junction_1	64.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	-202858680	True	NA	NA	False	NA	NA	NA	202861608	202851827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202853281_202858881_202859103_202861447
transcript_94388.nic	chr9	-	1350	5	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	-13	12393	-13	-1851	5prime_fragment	FALSE	canonical	3	436	junction_1	76.5996083540902	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATATGAGCTTTTCAAA	-120835419	True	NA	NA	False	NA	NA	NA	120842935	120828445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_9439.known	chr1	-	631	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	0	481	0	-481	multi-exon	FALSE	canonical	3	92	junction_1	48.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGCCGTGCATCATC	-202858692	True	NA	NA	False	AAAAAG	-14	NA	202861620	202857927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202858165_202858881_202859103_202861447
transcript_94390.known	chr9	-	567	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	22	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTAAACCCCTTTC	-120835366	True	NA	NA	False	AATAAA	-14	NA	120842882	120831669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120831946_120833311_120833457_120842736
transcript_94391.nic	chr9	+	700	2	ISM	ENSG00000226752.10	ENST00000640296.2	1606	4	42	6154	-1	-8	5prime_fragment	FALSE	canonical	3	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCATCTGGTTTGTGA	120842164	True	NA	NA	False	TTTAAA	-21	NA	120843083	120845336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_120843440_120844992
transcript_94392.known	chr9	-	836	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	11.2333209693305	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-120875961	True	NA	-34	True	AATAAA	-27	NA	120877188	120869586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_94393.known	chr9	+	7719	44	FSM	ENSG00000119397.19	ENST00000373855.7	7719	44	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	15.0629829689248	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	121074435	True	NA	13	True	AATAAA	-14	NA	121074954	121177610	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501_121113725_121115090_121115201_121118345_121118541_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121171407_121171549_121173242_121173510_121173674_121173738_121175017_121175225_121177162
transcript_94395.known	chr9	+	2595	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	42.3457510236598	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121266750	True	NA	15	True	AATAAA	-17	NA	121268161	121332842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_94397.known	chr9	-	4149	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_5	38.386859996725	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCACTGTGCTGCTCT	-121198395	True	NA	NA	False	AATAAA	-19	NA	121201869	121178132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
transcript_94402.known	chr9	-	3145	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.8836956466506	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTGGTTGGCTTCTTC	-121366642	True	NA	75	True	NA	NA	NA	121370250	121338986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
transcript_94406.known	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1511	junction_2	52.6181210864343	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122141685	True	NA	-12	True	ATTAAA	-15	NA	122159779	122144057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
transcript_94408.nnic	chr9	-	680	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_2	766.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122159801	False	NA	-12	True	ATTAAA	-15	NA	122159819	122144057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_122144379_122148111_122148278_122159626
transcript_94417.nic	chr9	+	2130	8	NIC	ENSG00000148187.18	novel	1186	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	32	junction_4	56.0477201924887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	122261701	True	NA	NA	False	AATAAA	-43	NA	122264883	122323088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_94418.nic	chr9	+	1456	8	NIC	ENSG00000148187.18	novel	9594	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	69.9609220368407	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	122261672	True	NA	NA	False	AATAAA	-43	NA	122264854	122323088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122265461_122265546_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_9442.nnic	chr1	+	2214	2	NIC	ENSG00000234996.4	novel	2321	3	NA	NA	-768	120	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGTCCTTGAAGCTTG	NA	False	NA	5	True	AATAAA	-21	NA	202860985	202874446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_202861810_202873056
transcript_94421.nic	chr9	+	1657	8	NIC	ENSG00000148187.18	novel	9594	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	69.7277504561381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	122261706	True	NA	NA	False	AATAAA	-43	NA	122264888	122323088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122265461_122265781_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_94426.known	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	15.2388392675499	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	122261699	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_9443.known	chr1	-	3119	2	FSM	ENSG00000183155.5	ENST00000367262.4	3119	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGTAGGGGATGGGG	-202887027	True	NA	NA	False	NA	NA	NA	202889149	202878281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202881224_202888972
transcript_94433.known	chr9	-	889	7	FSM	ENSG00000119446.14	ENST00000483428.1	889	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	168.482442210853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTTGGATGTTCT	-122261814	True	NA	-119	True	NA	NA	NA	122264794	122241757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122254273_122254368_122261379_122261509_122264714
transcript_94435.known	chr9	+	1176	6	FSM	ENSG00000148187.18	ENST00000373723.9	1176	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	60.294610041031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGGATTGATGATC	122261712	True	NA	NA	False	AATAAA	-36	NA	122264894	122323092	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
transcript_94436.nnic	chr9	+	1251	6	NIC	ENSG00000148187.18	novel	9594	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	65.0335298134739	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	122261701	True	NA	NA	False	AATAAA	-43	NA	122264883	122323088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122313226_122313387_122322539
transcript_94438.known	chr9	+	1841	6	FSM	ENSG00000148187.18	ENST00000297908.7	1841	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	61.6421933418985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	122264570	True	NA	13	True	AATAAA	-23	NA	122264602	122323461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_94442.known	chr9	-	4977	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	22.6503863101714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTCTTAGTCAATGT	-122261860	True	NA	NA	False	AATAAA	-32	NA	122264840	122237621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
transcript_94446.nnic	chr9	-	858	6	NNC	ENSG00000119446.14	novel	4977	6	NA	NA	-16	3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	146.588676233876	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTTGAACCCTGGGA	-122261876	True	NA	-28	True	AATAAA	-18	NA	122264856	122241666	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_122242044_122245255_122245342_122247517_122247605_122251936_122251974_122261379_122261509_122264714
transcript_94447.nic	chr9	+	1686	2	ISM	ENSG00000148187.18	ENST00000441707.5	858	5	-11	18203	-6	-18203	5prime_fragment	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATTCAGGCCGGC	122261693	True	NA	NA	False	NA	NA	NA	122264875	122267084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_122264939_122265461
transcript_94450.known	chr9	-	3017	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	26.5120517668642	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	-122824413	True	NA	NA	False	NA	NA	NA	122828588	122818096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
transcript_94454.known	chr9	-	4099	2	FSM	ENSG00000186130.5	ENST00000373659.4	4099	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTTTTGTCTTC	-122912337	True	NA	-4	True	AATAAA	-18	NA	122913323	122908055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122912082_122913250
transcript_94455.known	chr9	-	4455	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-122930890	True	NA	NA	False	AATAAA	-16	NA	122931512	122915565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122919945_122931436
transcript_94460.known	chr9	+	4986	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	18.9937252796812	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	122934516	True	NA	13	True	ATTAAA	-19	NA	122941019	123104866	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
transcript_94461.known	chr9	-	325	2	FSM	ENSG00000286718.2	ENST00000656036.2	519	2	0	194	0	-194	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAAGCGGACTGGGTA	-122941222	True	NA	NA	False	NA	NA	NA	122941260	122940732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122940936_122941138
transcript_94464.known	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	18.8586187193018	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	-123928875	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_9447.known	chr1	-	3311	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	28.1782989004947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-202925377	True	NA	-22	True	ATTAAA	-17	NA	202927234	202891119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_94475.known	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_2	94.3616577269581	3422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-124392443	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
transcript_94491.known	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	13803.3373930908	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	-124656704	True	NA	-14	True	AATAAA	-20	NA	124861915	124857879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
transcript_9450.nic	chr1	-	1893	11	NIC	ENSG00000117153.16	novel	3311	12	NA	NA	-30	-1261	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.787901914304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCGTCGTCCTGGTTCT	-202925407	True	NA	-1	True	NA	NA	NA	202927264	202892380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_202892660_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_94501.known	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	23069	junction_3	3348.45300930976	23857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656746	True	NA	-17	True	AATAAA	-17	NA	124861957	124857882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
transcript_94509.known	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	28114	junction_1	1539	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656725	True	NA	-17	True	AATAAA	-17	NA	124861936	124857882	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124858068_124860182_124860265_124861418
transcript_94511.known	chr9	+	1325	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	589.792242140306	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAATAATTGATCTA	124856115	True	NA	NA	False	AATAAA	-7	NA	124869204	124877717	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
transcript_94514.known	chr9	-	12111	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	12.2352941176471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTACTTTTTCGGT	-125141700	True	NA	0	True	AATAAA	-16	NA	125143528	124942607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_94518.nnic	chr9	-	782	5	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-52293	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	24.2731847931004	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	-125141700	True	NA	-8	True	AATAAA	-27	NA	125143528	125052203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_125052596_125055875_125056008_125065989_125066059_125142632_125142678_125143384
transcript_9452.nic	chr1	-	1916	10	ISM	ENSG00000117153.16	ENST00000367261.8	3311	12	-30	2762	-30	-2762	5prime_fragment	FALSE	canonical	3	135	junction_3	27.5237271377907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGAGTAGCTACTTACC	-202925407	True	NA	NA	False	AATAAA	-34	NA	202927264	202893881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_94520.nnic	chr9	-	713	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-52293	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	15.2534149181967	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	-125141700	True	NA	-8	True	AATAAA	-27	NA	125143528	125052203	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
transcript_94523.known	chr9	-	4349	8	FSM	ENSG00000119414.12	ENST00000451402.5	4349	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	180.195811861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125188918_125188948_125189561
transcript_94524.known	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	12.6809130410848	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-125185295	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
transcript_94528.known	chr9	-	4172	6	FSM	ENSG00000119414.12	ENST00000415905.5	4172	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	154.519125029881	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125171084_125171181_125189643
transcript_94531.known	chr9	+	1537	10	FSM	ENSG00000136933.17	ENST00000628863.2	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	118.064117336594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220326_125220398_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94535.known	chr9	+	1466	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	79.9730423330262	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94539.nnic	chr9	+	1302	9	NNC	ENSG00000136933.17	novel	1466	9	NA	NA	26	-158	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	93.7426663798294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	125197166	True	NA	15	True	AATAAA	-17	NA	125200570	125234000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_125200601_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94542.nnic	chr9	+	1193	8	NIC	ENSG00000136933.17	novel	1466	9	NA	NA	-47	-158	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	112.411779468458	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	NA	False	NA	15	True	AATAAA	-17	NA	125200494	125234000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125227909_125228060_125232595_125232746_125233687
transcript_94543.known	chr9	+	1313	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.263022854328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94547.known	chr9	+	1671	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	55.3552534239764	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGGGAATGACTTTCA	125197137	True	NA	NA	False	ACTAAA	-23	NA	125200541	125234161	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94554.nnic	chr9	+	1324	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	21	-158	intron_retention	FALSE	canonical	3	13	junction_4	103.530054680862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	125197161	True	NA	15	True	AATAAA	-17	NA	125200565	125234000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125227909_125228060_125232595_125232746_125233687
transcript_94556.nic	chr9	+	1333	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	21	-158	intron_retention	FALSE	canonical	3	26	junction_3	98.9518682098636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	125197161	True	NA	15	True	AATAAA	-17	NA	125200565	125234000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_9456.known	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_3	60.9516369002205	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-202947405	True	NA	-9	True	AATAAA	-31	NA	202958312	202940831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
transcript_94565.nnic	chr9	+	1171	6	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	21	-158	intron_retention	FALSE	canonical	3	30	junction_3	105.659074385497	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	125197161	True	NA	15	True	AATAAA	-17	NA	125200565	125234000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_946.nnic	chr1	+	617	3	NNC	ENSG00000251503.8	novel	626	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	10428123	True	NA	7	True	AATAAA	-16	NA	10430392	10451659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_10430569_10450164_10450323_10451376
transcript_9460.known	chr1	-	1624	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	9.32402809948576	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTGTCTGGGGTC	-202965294	True	NA	-4	True	AATAAA	-31	NA	202967257	202961872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
transcript_94606.known	chr9	-	3921	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_5	421.681618943845	2701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-125160052	True	NA	-27	True	ATTAAA	-15	NA	125241343	125234852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_94614.known	chr9	-	4281	7	FSM	ENSG00000044574.9	ENST00000679475.1	4281	7	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_5	439.937495560449	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-125160053	True	NA	-34	True	ATTAAA	-8	NA	125241344	125234859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240908_125241004
transcript_94615.known	chr9	-	4028	7	FSM	ENSG00000044574.9	ENST00000681544.1	4028	7	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_4	454.811926942213	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-125160077	True	NA	-34	True	ATTAAA	-8	NA	125241368	125234859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239534_125240171_125240310_125240675_125240908_125241004
transcript_94616.known	chr9	-	4052	7	FSM	ENSG00000044574.9	ENST00000679355.1	4052	7	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_4	455.395707050473	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-125160077	True	NA	-34	True	ATTAAA	-8	NA	125241368	125234859	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_94626.known	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	172.37610234936	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690175	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_94629.known	chr9	-	3256	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_4	143.058589396093	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690170	True	NA	NA	False	AATAAA	-18	NA	125707203	125437393	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_9463.known	chr1	-	863	8	FSM	ENSG00000159348.13	ENST00000482572.5	863	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	35.2113154354375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCGATTCACCTACTGA	-202965280	True	NA	NA	False	NA	NA	NA	202967243	202962546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966748_202966899_202967190
transcript_94631.known	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.225909926031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-125690198	True	NA	2	True	AATAAA	-22	NA	125707231	125521467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_94632.known	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	34.8532638356869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125746969	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_94634.known	chr9	+	2755	8	FSM	ENSG00000167081.18	ENST00000342287.9	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	33.5978619339179	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125747330	False	NA	NA	False	AATAAA	-22	NA	125747344	125967377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
transcript_94635.known	chr9	+	1130	8	FSM	ENSG00000167081.18	ENST00000373482.6	1130	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	54.9151479046333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCGTTTTTGTAGCCCA	125747050	False	NA	NA	False	NA	NA	NA	125747453	125965990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125747654_125748549_125748624_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_94636.known	chr9	+	5940	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	126803354	True	NA	13	True	AATAAA	-24	NA	126805039	126838210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_126805133_126808792_126808916_126832486
transcript_94639.known	chr9	-	3443	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	2.1650635094611	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATGTATCTACACTCT	-127121657	True	NA	-15	True	AATAAA	-15	NA	127122635	127087347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
transcript_94641.known	chr9	+	628	1	FSM	ENSG00000271833.1	ENST00000607259.1	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGGAGGAATTTTT	NA	False	NA	5	True	AATAAA	-18	NA	127366769	127367397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127366800_127367400
transcript_94642.known	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	78.3341872872833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	127394546	True	NA	NA	False	NA	NA	NA	127397137	127407855	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_94644.nic	chr9	+	1174	8	NIC	ENSG00000136856.18	novel	1763	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	99.1412103609631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACACAGAAAATCAGGTC	127394608	True	NA	13	True	AATAAA	-3	NA	127397199	127407652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407435
transcript_94648.known	chr9	+	914	7	FSM	ENSG00000136856.18	ENST00000373352.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	110.67921615592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAAGCCCAGAGCCC	127394634	True	NA	NA	False	NA	NA	NA	127397225	127407291	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_94652.known	chr9	+	2194	6	FSM	ENSG00000196152.10	ENST00000543471.5	2194	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.7171425595858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423591	True	NA	10	True	AATAAA	-23	NA	127424373	127445371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127424804_127428551_127428661_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_94655.known	chr9	+	2192	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	12.3768937944866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423591	True	NA	10	True	AATAAA	-23	NA	127424373	127445371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_94656.known	chr9	+	2078	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	11.5190060335083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACGCTCAGCTCTCCA	127423599	True	NA	11	True	AATAAA	-24	NA	127424381	127445372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_94659.known	chr9	-	864	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	3616.3224260136	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-127372243	True	NA	-5	True	AATAAA	-23	NA	127451405	127447673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
transcript_94671.known	chr9	-	634	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	3600	junction_1	2119.74490734669	12582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-127372244	True	NA	-5	True	AATAAA	-23	NA	127451406	127447673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
transcript_94672.known	chr9	-	499	6	FSM	ENSG00000197958.13	ENST00000536368.1	499	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_4	3708.79912640197	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGGTGTGGCGTC	-127372211	True	NA	-8	True	AATAAA	-20	NA	127451373	127447676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127450730_127450805_127451280
transcript_94673.known	chr9	-	2275	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	0	0	0	multi-exon	FALSE	canonical	3	9090	junction_3	303.930182041132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGATTTTCTGGTGTGGC	-127372243	True	NA	-11	True	AATAAA	-17	NA	127451405	127447679	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
transcript_94675.known	chr9	+	3120	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_1	23.245679168396	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449880	True	NA	19	True	AATAAA	-16	NA	127451509	127503499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_94676.known	chr9	+	3376	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.0771977238173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449883	True	NA	19	True	AATAAA	-16	NA	127451512	127503499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_94677.known	chr9	+	3261	24	FSM	ENSG00000148356.15	ENST00000675141.1	3261	24	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_20	39.0826761693662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCAGTGCGCTTCTG	127449885	True	NA	5	True	AATAAA	-2	NA	127451514	127503485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_94679.known	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	17.4674300087652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	127609321	True	NA	7	True	AATAAA	-20	NA	127612276	127692699	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_94680.nic	chr9	+	949	7	ISM	ENSG00000136854.24	ENST00000373302.8	3880	20	-12	29114	0	-137	5prime_fragment	FALSE	canonical	3	137	junction_6	11.5181016954473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTGAACCTCTATGT	127609309	True	NA	NA	False	CATAAA	-17	NA	127612264	127663585	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204
transcript_94681.known	chr9	+	566	2	FSM	ENSG00000136854.24	ENST00000476182.3	566	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTTCCAATGATTCT	127609405	False	NA	8	True	AATAAA	-15	NA	127612360	127613751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127612441_127613265
transcript_94682.nnic	chr9	-	714	4	NIC	ENSG00000187024.15	novel	962	5	NA	NA	-3	37	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	72.2910782877113	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAGTAGGTTCTTCT	-127714077	True	NA	-10	True	ATTAAA	-30	NA	127715654	127713934	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127714283_127714378_127714425_127714602_127714703_127715434
transcript_94685.known	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_5	61.170299619632	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	127777373	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
transcript_94687.nic	chr9	+	1903	6	NIC	ENSG00000136807.14	novel	2483	7	NA	NA	-10	-708	intron_retention	FALSE	canonical	3	933	junction_4	45.6306914258375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTTTTCCTCCA	127777403	True	NA	15	True	ATTAAA	-22	NA	127786063	127790084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788693_127789177
transcript_94688.nnic	chr9	-	2086	11	NNC	ENSG00000106991.14	novel	2946	15	NA	NA	-1177	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	7.1281133548787	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-127825565	False	17	-3	True	AATAAA	-17	NA	127825582	127815015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825450
transcript_94689.known	chr9	-	1947	13	FSM	ENSG00000257524.6	ENST00000646171.1	1947	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	131.708933089429	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACTAAAGGAATTTCTAA	-127896626	True	NA	-43	True	NA	NA	NA	127899591	127867863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127885185_127885344_127886635_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_94692.known	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	17.1310309737103	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-127875280	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
transcript_94694.known	chr9	-	2448	7	FSM	ENSG00000160408.16	ENST00000373142.5	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	135.733091846544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896681	True	NA	-11	True	AATAAA	-16	NA	127899646	127885321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_94695.known	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	126.399828586382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	-127896609	True	NA	-15	True	AATAAA	-12	NA	127899574	127885325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_94698.nic	chr9	-	2269	6	NIC	ENSG00000160408.16	novel	2410	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	16	junction_4	127.732533052469	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	-127896614	True	NA	-10	True	AATAAA	-17	NA	127899579	127885320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894630_127896241_127896333_127899502
transcript_94699.known	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	85.5789693791646	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896690	True	NA	-11	True	AATAAA	-16	NA	127899655	127885321	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_94701.nic	chr9	-	648	4	ISM	ENSG00000160408.16	ENST00000291839.10	2357	7	-6	8942	-6	254	5prime_fragment	FALSE	canonical	3	189	junction_2	117.303973599458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTTTTCACTGCTC	-127896615	True	NA	-13	True	NA	NA	NA	127899580	127894267	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_127894692_127896241_127896333_127897955_127898011_127899502
transcript_94704.nnic	chr9	-	1568	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.7581201051306	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915087	True	NA	-10	True	NA	NA	NA	127917052	127907885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_94711.known	chr9	-	1706	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	10.2254584249314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915076	True	NA	-10	True	NA	NA	NA	127917041	127907885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_94712.nic	chr9	-	2187	6	NIC	ENSG00000136840.19	novel	1706	6	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_2	44.1225565895722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915087	True	NA	-10	True	NA	NA	NA	127917052	127907885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_94713.known	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	46.5778917513449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	-127915031	True	NA	NA	False	NA	NA	NA	127916996	127908446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_94722.nic	chr9	-	1656	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	33	0	intron_retention	FALSE	canonical	3	11	junction_2	27.6439414700581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127926658	True	NA	-6	True	ATTAAA	-19	NA	127927424	127920880	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127922115_127925106_127925232_127925866_127925980_127927152_127927209_127927296
transcript_94724.known	chr9	-	1104	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	17.5926120857592	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	-127926725	True	NA	-5	True	AATAAA	-20	NA	127927491	127921528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_94728.known	chr9	-	694	4	FSM	ENSG00000167103.12	ENST00000464759.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.8030572630095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTCGCCTGCGCTTCC	-127926618	True	NA	NA	False	NA	NA	NA	127927384	127921775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927296
transcript_94736.known	chr9	-	912	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_3	357.125561485966	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931508	True	NA	-6	True	AATAAA	-16	NA	127937854	127935098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
transcript_94737.nnic	chr9	-	847	3	NIC	ENSG00000136908.18	novel	912	4	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_2	671	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931533	True	NA	-6	True	AATAAA	-16	NA	127937879	127935098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127935781_127936552_127936656_127937817
transcript_94738.known	chr9	-	1662	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_2	416	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931480	True	NA	-6	True	AATAAA	-16	NA	127937826	127935098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127935781_127936552_127937524_127937817
transcript_94741.nic	chr9	-	1851	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066887	True	NA	-2	True	ATTAAA	-24	NA	128067320	128061232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128061827_128063373_128063901_128066590
transcript_94742.known	chr9	-	3398	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066887	True	NA	-2	True	ATTAAA	-24	NA	128067320	128061232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128063901_128066590
transcript_94744.known	chr9	-	1598	7	FSM	ENSG00000148334.16	ENST00000338961.11	1598	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	451.684870481868	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128117641	True	NA	-4	True	AATAAA	-42	NA	128127729	128120692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_94745.nnic	chr9	-	1439	7	NNC	ENSG00000148334.16	novel	1598	7	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	557.382473910171	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128155	False	NA	-4	True	AATAAA	-42	NA	128128194	128120692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128062
transcript_94746.nic	chr9	-	1522	7	NIC	ENSG00000148334.16	novel	1614	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	560.136193756086	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128423	False	NA	-4	True	AATAAA	-42	NA	128128462	128120692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128247
transcript_94748.known	chr9	+	2100	1	FSM	ENSG00000232850.3	ENST00000443493.3	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGCCTGACCATGCTA	128128511	True	NA	NA	False	AATAAA	-22	NA	128128528	128130628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128128500_128130600
transcript_94749.nnic	chr9	+	669	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-704	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.89915248150105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	128150622	True	NA	6	True	AATAAA	-15	NA	128150795	128153453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128150993_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_94750.known	chr9	+	625	4	FSM	ENSG00000148346.12	ENST00000494317.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	128151495	False	NA	6	True	AATAAA	-15	NA	128151668	128153453	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128151718_128151905_128152026_128152182_128152285_128153099
transcript_94754.known	chr9	+	434	3	FSM	ENSG00000171159.5	ENST00000486420.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGGGCCACCCTTC	128160447	False	NA	NA	False	NA	NA	NA	128160459	128163737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128160487_128162003_128162116_128163442
transcript_94755.known	chr9	+	1570	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGTGTCCACATTAA	128152193	True	NA	-20	True	NA	NA	NA	128160313	128163890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128160487_128162003_128162953_128163442
transcript_94757.known	chr9	-	843	3	FSM	ENSG00000148337.22	ENST00000485862.5	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_1	20	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCAGTACTTCTGT	-128167463	False	NA	-12	True	AATAAA	-22	NA	128167473	128166064	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128166407_128166758_128166881_128167094
transcript_94758.known	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	128152144	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128160487_128163442
transcript_94760.known	chr9	-	4259	26	FSM	ENSG00000167110.19	ENST00000421699.8	4297	26	37	1	6	-1	multi-exon	FALSE	canonical	3	46	junction_20	21.9652816963498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCTGCCTGATGTGTT	-128272319	True	NA	-11	True	AATAAA	-14	NA	128275989	128255829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128257282_128257368_128257526_128257600_128257708_128257789_128257893_128257979_128258199_128258454_128258571_128259006_128259083_128259166_128259392_128260075_128260190_128260464_128260803_128261171_128261260_128261453_128261562_128261667_128261758_128262562_128262705_128263033_128263093_128265584_128265692_128265787_128265882_128265969_128266021_128266286_128266326_128267193_128267275_128267457_128267518_128267933_128267998_128268116_128268161_128268419_128268525_128273849_128273973_128275892
transcript_94763.known	chr9	-	5426	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	38.9389894316633	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTCATTGTCTTT	-128318798	True	NA	-26	True	ATTAAA	-7	NA	128322447	128305158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
transcript_94772.known	chr9	+	466	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	78.4932321923362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	128275378	128288733	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_94774.known	chr9	+	763	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	17.4266319178434	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	128273272	True	NA	17	True	AATAAA	-17	NA	128276243	128288989	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_94775.known	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	68.1189217471915	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	128276206	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
transcript_94776.known	chr9	-	428	2	FSM	ENSG00000167110.19	ENST00000490628.3	462	2	34	0	8	0	multi-exon	FALSE	canonical	3	115	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAGTTTAAATGAGA	-128272317	True	NA	-12	True	TATAAA	-18	NA	128275987	128273639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128273973_128275892
transcript_94777.known	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.8271140814808	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	128321392	True	NA	12	True	AATAAA	-18	NA	128322838	128334072	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_94783.known	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	128322475	False	NA	8	True	AATAAA	-25	NA	128322581	128323584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128322929_128323015_128323148_128323282
transcript_94785.known	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	128322520	False	NA	10	True	AATAAA	-27	NA	128322543	128323586	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128322929_128323015
transcript_94787.known	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_6	13.6554832291729	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	128340019	True	NA	7	True	NA	NA	NA	128340526	128361470	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_9479.known	chr1	+	3031	8	FSM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_3	189.042269325769	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCAGCTCTGAGTT	202986615	True	NA	NA	False	AATAAA	-19	NA	203007373	203024848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203007575_203007773_203007864_203008642_203008811_203014888_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
transcript_94792.known	chr9	+	2595	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	34.237223894469	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCTTTAATGAAAAG	128363568	True	NA	14	True	AATAAA	-26	NA	128371373	128392016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
transcript_94793.known	chr9	+	723	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	238.022582962205	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCCCAGAGCCAG	128363555	True	NA	NA	False	NA	NA	NA	128371360	128390090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
transcript_94794.known	chr9	+	803	4	FSM	ENSG00000167118.11	ENST00000483206.2	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	37.6150088247881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAAAAGAGGCCAGGTG	128363569	True	NA	NA	False	NA	NA	NA	128371374	128389869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260
transcript_94799.known	chr9	+	3899	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	-76	-32	0	0	multi-exon	FALSE	canonical	3	70	junction_4	16.6826256926181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	NA	False	NA	35	True	NA	NA	NA	128456005	128501292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_94800.known	chr9	+	3030	21	FSM	ENSG00000136811.17	ENST00000604420.5	3030	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	33.5125349682772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACAGGCCTTAAATTTA	128454254	True	NA	NA	False	NA	NA	NA	128456151	128500483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_94805.known	chr9	+	2249	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	27.1825107171668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	128456056	128494839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_94811.known	chr9	+	1007	5	FSM	ENSG00000136811.17	ENST00000444993.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	32.368001173999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTTGCTTGTGA	128454231	True	NA	NA	False	NA	NA	NA	128456128	128461373	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460549_128460667_128460941
transcript_94814.known	chr9	+	3373	17	FSM	ENSG00000119392.16	ENST00000683748.1	3373	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.2670602258576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGTTTTTTGAAAAA	NA	False	NA	-3	True	NA	NA	NA	128504654	128542268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128532664_128532692_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_94815.known	chr9	+	3302	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.8715407977128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	128502618	True	NA	17	True	AATAAA	-19	NA	128504718	128542288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_94818.known	chr9	-	822	4	FSM	ENSG00000228395.2	ENST00000434999.2	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCTAATAATTTGC	-128552369	True	NA	NA	False	AGTAAA	-19	NA	128552410	128528656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128529001_128536826_128536956_128543378_128543685_128552367
transcript_9482.known	chr1	+	2901	4	FSM	ENSG00000163485.17	ENST00000337894.9	2901	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.79271573232759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	203127650	True	NA	3	True	AATAAA	-16	NA	203127725	203167405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203127929_203128277_203128433_203128784_203129183_203165260
transcript_94821.nnic	chr9	-	1602	9	NNC	ENSG00000119333.12	novel	1823	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	178.741258527515	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-128650651	True	NA	-10	True	AAGAAA	-19	NA	128656710	128633652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635176_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_94823.known	chr9	-	1823	9	FSM	ENSG00000119333.12	ENST00000372715.7	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_5	43.8463225367875	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656847	128633652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_94827.nnic	chr9	-	1534	8	NNC	ENSG00000119333.12	novel	1823	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	201.993533943792	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-128650651	True	NA	-10	True	AAGAAA	-19	NA	128656710	128633652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635218_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_9483.known	chr1	-	494	2	FSM	ENSG00000133063.16	ENST00000479483.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATAGTAAGTGAATTA	NA	False	NA	NA	False	AATAAA	-10	NA	203218021	203212834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_203213046_203217738
transcript_94834.nic	chr9	-	2199	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	532	junction_5	33.5553152819858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-128650651	True	NA	-10	True	AAGAAA	-19	NA	128656710	128633652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128636439_128636917_128637028_128640690_128640940_128656540
transcript_94835.nnic	chr9	-	1576	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_4	190.232725354809	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-128650651	True	NA	-10	True	AAGAAA	-19	NA	128656710	128633652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_9484.known	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	203304640	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203305749_203307103
transcript_94846.known	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4659	junction_1	683.221032749898	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	128642211	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_9485.known	chr1	+	1434	8	FSM	ENSG00000188770.10	ENST00000367222.7	1434	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.39970842444753	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGCCCACACAGAACG	203494108	True	NA	88	True	NA	NA	NA	203494152	203508949	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203494218_203495964_203496237_203496976_203497116_203498680_203498840_203499648_203499852_203502913_203503010_203503549_203503746_203508645
transcript_94851.known	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	55.8949908310217	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-128717799	True	NA	-15	True	TATAAA	-22	NA	128724127	128720872	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_94853.known	chr9	-	644	5	FSM	ENSG00000160446.19	ENST00000452105.5	644	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	215.075568115023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGTCTCGCACCTCTA	-128717793	True	NA	NA	False	NA	NA	NA	128724121	128721396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128721531_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_94854.nic	chr9	-	1123	5	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	204.449718757449	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAACCATATCAC	-128717805	True	NA	-22	True	TATAAA	-15	NA	128724133	128720879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_94856.nnic	chr9	+	459	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	23	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	NA	False	NA	8	True	AATAAA	-20	NA	128724406	128733194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128724483_128724605_128724636_128732841
transcript_94857.nnic	chr9	+	731	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	5.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGAGGGCCCTGATGCT	128723664	True	NA	4	True	AATAAA	-16	NA	128724438	128733190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128724636_128730063_128730249_128732841
transcript_94860.known	chr9	+	544	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	10	5	10	-5	multi-exon	FALSE	canonical	3	53	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723670	True	NA	8	True	AATAAA	-20	NA	128724444	128733194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128724636_128732841
transcript_94861.known	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_9	22.3935498387407	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	128783678	True	NA	28	True	AATAAA	-22	NA	128787252	128810430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_94871.known	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_12	17.5760253375633	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879669	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_94875.known	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	50.7074260395413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879755	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_94878.nnic	chr9	-	1846	12	NNC	ENSG00000198917.13	novel	4259	12	NA	NA	-37	21	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	142.637725238301	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGCCTTCTGAATATTCA	-128822326	True	NA	-19	True	AATAAA	-15	NA	128829831	128822069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_128822834_128823746_128823864_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_94879.known	chr9	-	4259	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	66.4205235632272	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTTGAATTATCCTGAA	-128822289	True	NA	-14	True	AATAAA	-17	NA	128829794	128819650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_9488.known	chr1	+	5917	18	FSM	ENSG00000058673.17	ENST00000367210.3	5917	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	115.412933975009	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787261	True	NA	8	True	AATAAA	-18	NA	203795622	203854124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203795795_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_94885.nic	chr9	-	1708	11	NIC	ENSG00000198917.13	novel	4259	12	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	140.107958374962	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	-128822326	True	NA	-40	True	NA	NA	NA	128829831	128822090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128822834_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_9489.known	chr1	+	1560	5	FSM	ENSG00000182004.13	ENST00000414487.7	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	3867	junction_1	431.785247547899	3862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGTTTGAAATTAAT	203838067	True	NA	4	True	AATAAA	-22	NA	203861598	203871152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203861714_203862195_203862223_203863662_203863726_203865040_203865120_203869876
transcript_94890.known	chr9	-	898	3	FSM	ENSG00000198917.13	ENST00000467582.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	211	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	-128817317	False	NA	-40	True	NA	NA	NA	128824822	128822090	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128822834_128824071_128824175_128824770
transcript_94891.known	chr9	+	5689	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	80.0905247699327	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	128934284	True	NA	32	True	ATTAAA	-17	NA	128947698	129007096	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_94896.known	chr9	-	2074	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGTTTTGCTGATATA	-128945839	True	NA	-5	True	AATAAA	-17	NA	128947603	128945529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128945500_128947600
transcript_94898.known	chr9	+	3610	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	25.9714373024589	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	129034188	True	NA	17	True	AATAAA	-23	NA	129036625	129072082	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_94899.known	chr9	-	411	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGTCTATGCTACTTAA	-129080614	True	NA	-3	True	AATAAA	-15	NA	129080765	129080354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129080400_129080800
transcript_949.known	chr1	+	584	3	FSM	ENSG00000175279.22	ENST00000462462.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	10431092	False	NA	-12	True	AATAGA	-5	NA	10431122	10442502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10431402_10440346_10440414_10442264
transcript_9490.known	chr1	+	532	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	1954.97858044532	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203838071	True	NA	26	True	AATAAA	-28	NA	203861602	203870084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
transcript_94900.known	chr9	+	2169	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	14.4603610195709	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	129076255	True	NA	17	True	AATAAA	-17	NA	129081110	129090438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_94901.known	chr9	+	2037	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	107.047367500975	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076255	True	NA	14	True	AATAAA	-14	NA	129081110	129090435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_94902.nic	chr9	+	2269	7	NIC	ENSG00000167130.18	novel	2169	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	289	junction_5	15.2716149186071	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076251	True	NA	14	True	AATAAA	-14	NA	129081106	129090435	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_129081208_129084667_129084769_129085022_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_94905.known	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	219.623063451906	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	129110659	True	NA	23	True	ATTAAA	-20	NA	129110949	129148944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_94906.known	chr9	+	2746	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	273.366804861161	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129100405	True	NA	24	True	ATTAAA	-21	NA	129111412	129148945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_94909.known	chr9	+	2640	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_6	71.0192114505767	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100407	True	NA	25	True	ATTAAA	-22	NA	129111414	129148946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_94911.known	chr9	+	2653	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	222.589553607082	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129111023	False	NA	24	True	ATTAAA	-21	NA	129111313	129148945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_94914.known	chr9	+	988	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	338.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTCGGGTGGTGGAGA	129138938	True	NA	NA	False	NA	NA	NA	129139381	129147998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_94915.known	chr9	+	1153	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	334	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	129139564	False	NA	NA	False	NA	NA	NA	129140007	129148287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129140152_129142444_129142553_129147386
transcript_94916.known	chr9	+	857	3	FSM	ENSG00000119383.21	ENST00000432651.5	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	327.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGGAGAGGCCTTAG	129140530	False	NA	NA	False	NA	NA	NA	129141953	129148006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129142083_129142444_129142553_129147386
transcript_94917.known	chr9	+	618	3	FSM	ENSG00000119383.21	ENST00000435132.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	342.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTCTGGTTTTGAGAG	129141348	True	NA	NA	False	NA	NA	NA	129141993	129147772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129142118_129142444_129142553_129147386
transcript_94918.known	chr9	+	870	3	FSM	ENSG00000119383.21	ENST00000434095.2	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	340	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGGTCGGGTGGTGG	129141379	True	NA	NA	False	NA	NA	NA	129142024	129147995	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129142178_129142444_129142553_129147386
transcript_94919.known	chr9	+	2737	10	FSM	ENSG00000119383.21	ENST00000348141.9	2737	10	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_2	220.817672400658	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100328	True	NA	25	True	ATTAAA	-22	NA	129111335	129148946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120629_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_94920.known	chr9	-	973	2	FSM	ENSG00000095321.18	ENST00000393384.3	973	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGATGCAGTGACTC	-129110034	True	NA	-2	True	AATACA	-16	NA	129110711	129107333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129108078_129110482
transcript_94925.known	chr9	+	1112	4	FSM	ENSG00000233901.7	ENST00000654735.1	1112	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	NA	False	NA	24	True	ATTAAA	-29	NA	129333772	129347477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129334199_129338791_129338918_129341735_129342044_129347225
transcript_94926.known	chr9	+	902	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	11.4406682011537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	129333649	True	NA	24	True	ATTAAA	-29	NA	129333886	129347477	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
transcript_94928.known	chr9	+	2226	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	3	0	3	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTTTGTGTATTGAG	129336437	True	NA	NA	False	AAGAAA	-44	NA	129336878	129348907	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
transcript_94930.known	chr9	+	640	4	FSM	ENSG00000233901.7	ENST00000444125.3	643	4	0	3	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	11.4406682011537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	129336481	True	NA	8	True	ATTAAA	-13	NA	129336922	129347461	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129336989_129338791_129338918_129341831_129342044_129347225
transcript_94933.known	chr9	+	974	5	FSM	ENSG00000233901.7	ENST00000657886.1	974	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.63145976158349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATCCAGCCCAGTCT	129333669	True	NA	8	True	AATAAA	-22	NA	129333906	129359538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129355457_129355599_129359335
transcript_94934.known	chr9	-	4603	6	FSM	ENSG00000148331.12	ENST00000277458.5	4603	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	15.5357651887508	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTTTGAATGCAGTAAG	-129639506	True	NA	NA	False	AATAAA	-16	NA	129642151	129634604	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129638458_129638572_129638660_129639201_129639311_129639401_129639509_129640540_129640723_129641886
transcript_94936.known	chr9	+	1562	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	256.916761271471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618169	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
transcript_94938.known	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	247.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	129618216	True	NA	NA	False	NA	NA	NA	129626199	129635930	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129634053_129634307_129635207
transcript_94939.known	chr9	+	1346	3	FSM	ENSG00000148335.15	ENST00000617943.4	1346	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618169	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626322_129634053_129634307_129635207
transcript_94940.known	chr9	+	1123	2	FSM	ENSG00000148335.15	ENST00000459968.6	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCATGGTGGCGC	129618216	True	NA	NA	False	AATACA	-13	NA	129626199	129633676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129632649
transcript_94941.known	chr9	-	1751	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCAGCACCTCGTC	-129752781	True	NA	-20	True	ATTAAA	-16	NA	129753042	129738348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129739861_129748654_129748738_129752886
transcript_94942.known	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	1	175	junction_3	83.6551701928817	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-129820516	True	NA	0	True	AATAAA	-16	NA	129824136	129812941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_94947.known	chr9	-	1668	2	FSM	ENSG00000136827.12	ENST00000473084.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTGTAGCAGACCTGC	-129820484	True	NA	NA	False	AATAAA	-20	NA	129824104	129821375	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129822847_129823907
transcript_94948.known	chr9	+	4293	26	FSM	ENSG00000136878.14	ENST00000372429.8	4293	26	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	19.204332844439	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	129833957	True	NA	9	True	AATAAA	-16	NA	129835457	129881828	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
transcript_94953.known	chr9	-	1795	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	77.3384404743204	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-129825601	True	NA	81	True	ATTAAA	-18	NA	129835275	129827289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_94965.known	chr9	-	472	3	FSM	ENSG00000136819.15	ENST00000495934.2	472	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	311.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTTTCATGACTAGTAA	-129823843	False	NA	NA	False	AATAAA	-15	NA	129833517	129831409	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129831733_129831895_129831974_129833446
transcript_94966.known	chr9	+	6991	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	20.631690833925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGATGCAGGGAG	NA	False	NA	21	True	AATAAA	-21	NA	130053705	130140169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_94967.known	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	19.116470552034	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	130050358	True	NA	16	True	AATAAA	-16	NA	130053905	130140164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_94969.nic	chr9	+	2137	14	ISM	ENSG00000148358.20	ENST00000610997.1	2813	20	-39	27800	-20	17417	5prime_fragment	FALSE	canonical	3	49	junction_13	8.54088669648124	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGCTGACTCTATT	130050338	True	NA	10	True	AATAAA	-24	NA	130053885	130108323	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495
transcript_94971.known	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	143.462639348678	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	130437869	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_94972.known	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	43.0960010456011	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	130437842	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_94976.known	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_17	52.8382110144721	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570837	True	NA	34	True	AATAAA	-31	NA	130579576	130638352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_94977.known	chr9	+	2228	2	FSM	ENSG00000107164.16	ENST00000467100.1	2228	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGAAGTCTAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	130578964	130582086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130579765_130580658
transcript_94985.known	chr9	+	2012	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	7.18396652275051	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	130687522	True	NA	5	True	NA	NA	NA	130693779	130704892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_94989.known	chr9	+	1957	9	FSM	ENSG00000130713.17	ENST00000372352.7	1957	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	71.3017356029992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	130687522	True	NA	11	True	GATAAA	-27	NA	130693779	130704861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702157_130702311_130703052_130703182_130703693
transcript_94993.known	chr9	+	1956	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-20	-8	4	2	multi-exon	FALSE	canonical	3	10	junction_5	71.8836929082142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	130687502	True	NA	7	True	NA	NA	NA	130693759	130704894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
transcript_94997.known	chr9	+	1885	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	70.345503025555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	130687528	True	NA	11	True	GATAAA	-27	NA	130693785	130704861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_95.known	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	1140.72846900566	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_95006.known	chr9	-	449	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	19	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130939124	False	NA	-4	True	AATAAA	-16	NA	130939139	130938016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_130938216_130938535_130938649_130939002
transcript_95008.known	chr9	-	385	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130938713	True	NA	-4	True	AATAAA	-16	NA	130939286	130938016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_130938216_130938535_130938649_130939213
transcript_95009.known	chr9	+	3515	7	FSM	ENSG00000126878.13	ENST00000372309.7	3515	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	571.699415971559	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGGTGTATTTTGGGG	131079075	True	NA	34	True	AATAAA	-22	NA	131096475	131123152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096801_131096864_131106187_131106266_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_95013.known	chr9	+	3284	6	FSM	ENSG00000126878.13	ENST00000372300.5	3284	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	473.676514089521	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079150	True	NA	27	True	AATAAA	-15	NA	131096550	131123145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117848_131120234
transcript_95016.known	chr9	+	3374	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_2	56.9792944849267	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	131079130	True	NA	26	True	AATAAA	-14	NA	131096530	131123144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_95018.known	chr9	+	3398	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	427.368412496759	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079129	True	NA	27	True	AATAAA	-15	NA	131096529	131123145	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_9502.known	chr1	+	478	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2239.64347361112	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	203838077	True	NA	19	True	AATAAA	-21	NA	203861608	203870077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
transcript_95022.nic	chr9	+	1855	11	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-154	18286	-1	1802	5prime_fragment	FALSE	canonical	3	129	junction_2	10.121264743104	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATTCTTTGTGATCTT	131117717	True	NA	NA	False	AATACA	-19	NA	131125584	131141151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548
transcript_95025.nic	chr9	+	951	7	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-154	26228	-1	0	5prime_fragment	FALSE	canonical	3	129	junction_2	11.6153633893506	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCTGTGGAAGAAATT	131117717	True	NA	2	True	NA	NA	NA	131125584	131133209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105
transcript_95028.known	chr9	+	2065	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	131289483	True	NA	8	True	AATACA	-18	NA	131289722	131309261	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131290449_131307922
transcript_95029.known	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	131289572	False	NA	7	True	AATAAA	-22	NA	131289811	131291445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131290449_131291110
transcript_9503.nic	chr1	+	703	4	NIC	ENSG00000182004.13	novel	532	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	316	junction_1	2093.37351341481	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203838071	True	NA	26	True	AATAAA	-28	NA	203861602	203870084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_203861956_203863662_203863726_203865040_203865120_203869876
transcript_95031.known	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	26.076915848432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501423	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95033.known	chr9	+	3252	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	36.9109882369949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131502770	False	NA	14	True	ATTAAA	-17	NA	131502788	131523799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95035.known	chr9	+	3309	20	FSM	ENSG00000130714.19	ENST00000676640.1	3309	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	36.3833087054293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501411	True	NA	14	True	ATTAAA	-17	NA	131502905	131523799	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503314_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95038.known	chr9	+	2935	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	27.5444085876688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	131501400	True	NA	21	True	ATTAAA	-24	NA	131502894	131523806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95044.known	chr9	+	2461	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4499081630809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGCTAACTGCTGCAG	131501403	True	NA	NA	False	NA	NA	NA	131502897	131523442	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_9505.known	chr1	+	967	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	4258	junction_1	357.044348319178	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	203838071	True	NA	23	True	AATAAA	-25	NA	203861602	203870081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
transcript_95053.known	chr9	-	788	7	FSM	ENSG00000130717.13	ENST00000494584.5	788	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	130.172214990587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGGGCGGAGCTACAA	-131527097	True	NA	NA	False	NA	NA	NA	131531264	131525147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529557_131530485_131530646_131531066
transcript_95055.known	chr9	-	2162	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	43.3503171845374	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527096	True	NA	-4	True	AATAAA	-21	NA	131531263	131523800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_95056.known	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	137.064968374693	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527012	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
transcript_95057.nic	chr9	-	2169	7	NIC	ENSG00000130717.13	novel	2237	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	139.545691441907	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527061	True	NA	-4	True	AATAAA	-21	NA	131531228	131523800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531066
transcript_9506.known	chr1	-	776	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	8.38152730712011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213553	True	NA	-3	True	ATTAAA	-20	NA	204213988	204198162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
transcript_95062.known	chr9	-	2114	7	FSM	ENSG00000130717.13	ENST00000372211.7	2114	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	140.255322735202	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527033	True	NA	-4	True	AATAAA	-21	NA	131531200	131523800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531093
transcript_95063.known	chr9	-	1385	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	23.460779255287	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGCTTTGTCTCCTGT	-132079305	True	NA	-7	True	AATAAA	-15	NA	132079867	131860111	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_95065.known	chr9	-	1281	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	140.488137102983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGTCTCCTGTTTGTT	-132079304	True	NA	-2	True	AATAAA	-20	NA	132079866	131860106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_95069.known	chr9	-	2042	4	FSM	ENSG00000160563.14	ENST00000651555.1	2042	4	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_3	19.3448241713959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGCCTCCAGAGGTTG	-132079294	True	NA	NA	False	TATAAA	-28	NA	132079856	131937923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131939475_132014336_132014468_132077441_132077587_132079641
transcript_9507.nic	chr1	-	1611	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-137	0	intron_retention	FALSE	canonical	3	39	junction_2	8.65383665716478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213690	True	NA	-3	True	ATTAAA	-20	NA	204214125	204198162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
transcript_95070.known	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	-132079304	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132073743_132077441_132077587_132079641
transcript_95071.known	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	20.9047841414352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403715	True	NA	4	True	ATTAAA	-42	NA	132406840	132375547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
transcript_95073.known	chr9	-	1780	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	40.7370368686716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403726	True	NA	4	True	ATTAAA	-42	NA	132406851	132375547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
transcript_95075.nic	chr9	-	1090	2	ISM	ENSG00000125482.13	ENST00000334270.3	3143	11	-19	26261	-8	-26074	5prime_fragment	FALSE	canonical	3	109	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAATCACCAGGAATTTG	-132403734	True	NA	NA	False	TATAAA	-27	NA	132406859	132401808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_132402829_132406789
transcript_95076.nic	chr9	-	913	2	ISM	ENSG00000125482.13	ENST00000334270.3	3143	11	-19	26438	-8	-26251	5prime_fragment	FALSE	canonical	3	109	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGTCCAATCACC	-132403734	True	NA	NA	False	AAAAAG	-15	NA	132406859	132401985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_132402829_132406789
transcript_95077.nic	chr9	-	751	2	ISM	ENSG00000125482.13	ENST00000334270.3	3143	11	-19	26600	-8	-26413	5prime_fragment	FALSE	canonical	3	109	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTAACCGGGAATATG	-132403734	True	NA	NA	False	CATAAA	-27	NA	132406859	132402147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_132402829_132406789
transcript_95079.known	chr9	-	2814	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-44	1389	-44	-1389	multi-exon	FALSE	canonical	3	57	junction_5	16.9948664238511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATCACTAATTATT	-132668990	True	NA	-30	True	AAAAAG	-5	NA	132670027	132594385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_9508.known	chr1	-	5259	2	FSM	ENSG00000158615.10	ENST00000367188.5	5259	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTTGGTTCAACTT	-204408731	True	NA	-15	True	AATAAA	-26	NA	204411817	204403380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_204406314_204409491
transcript_95083.known	chr9	-	1333	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.9616780856531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTGAGTCTGTG	-132670122	True	NA	-5	True	AATAAA	-24	NA	132670401	132658080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_95085.known	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	10.988630487918	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	132667107	True	NA	15	True	AATAAA	-18	NA	132670463	132694953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
transcript_95086.known	chr9	-	1579	13	FSM	ENSG00000165695.10	ENST00000298545.4	1579	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.96320316489829	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	-132878209	True	NA	NA	False	AATAAA	-16	NA	132878284	132725577	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875200_132878171
transcript_95087.nic	chr9	+	681	5	NIC	ENSG00000165698.16	novel	2536	4	NA	NA	335	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.48746859276655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	132878250	True	NA	4	True	AATAAA	-16	NA	132878361	132890030	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_95088.known	chr9	+	894	5	FSM	ENSG00000165698.16	ENST00000350499.6	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.27760839478607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGAGGACCAGCAATCA	132878856	True	NA	NA	False	NA	NA	NA	132878897	132890201	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_132879015_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_95090.known	chr9	-	8582	23	FSM	ENSG00000165699.15	ENST00000646625.1	8582	23	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_22	27.0133499288808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	-132941045	True	NA	-6	True	AATAAA	-16	NA	132944633	132891352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_95091.known	chr9	-	1787	12	FSM	ENSG00000165699.15	ENST00000647462.1	1787	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	28.1439628451307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACGATCATGGCTCACTG	-132941028	True	NA	NA	False	NA	NA	NA	132944616	132910260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_95092.known	chr9	-	2232	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	24.7600050734985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941045	True	NA	-6	True	AATAAA	-19	NA	132944633	132909806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_95093.known	chr9	-	2299	12	FSM	ENSG00000165699.15	ENST00000642745.1	2299	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	24.5558900375692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAACATGTATGTGTAA	-132941028	True	NA	49	True	ATTAAA	-10	NA	132944616	132909751	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_95096.known	chr9	-	1717	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	22.4422441165685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	-132941045	True	NA	NA	False	AGTAAA	-20	NA	132944633	132910998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_95097.known	chr9	-	5732	21	FSM	ENSG00000165699.15	ENST00000645901.1	5732	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_20	27.6249886877805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAACTTGGCTTTCCT	-132941043	True	NA	NA	False	NA	NA	NA	132944631	132894848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_9510.known	chr1	+	10050	11	FSM	ENSG00000198625.14	ENST00000367182.8	10050	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	6.43739077577243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTCATTATTTT	204513019	True	NA	11	True	ATTAAA	-18	NA	204516405	204558120	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_95100.known	chr9	-	2005	3	FSM	ENSG00000165699.15	ENST00000646831.1	2005	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGTGCCAAACACTGTG	-132941028	True	NA	NA	False	AATAAA	-19	NA	132944616	132940734	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132942427_132943467_132943707_132944542
transcript_95102.known	chr9	+	2110	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_9	159.604832255602	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	133022048	True	NA	25	True	ATTAAA	-14	NA	133031003	133058501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
transcript_95108.known	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_8	51.0141156935999	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	133022041	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_95109.nic	chr9	+	2135	11	NIC	ENSG00000148308.18	novel	1999	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	145.055196390891	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	NA	False	NA	27	True	ATTAAA	-16	NA	133030705	133058503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133030911_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_95111.nic	chr9	+	2793	10	NIC	ENSG00000148308.18	novel	2098	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	430	junction_8	49.9888876540466	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	133022017	True	NA	27	True	ATTAAA	-16	NA	133030972	133058503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056909_133057813
transcript_95116.known	chr9	+	1999	9	FSM	ENSG00000148308.18	ENST00000372099.10	1999	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	173.762724354218	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030674	133058501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133031165_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_95119.known	chr9	-	1954	7	FSM	ENSG00000148288.13	ENST00000372040.9	1954	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.23606797749979	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGGTGATTTTTTTTGT	-133162761	True	NA	-16	True	AATAAA	-22	NA	133163914	133152947	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_95120.known	chr9	-	847	7	FSM	ENSG00000148288.13	ENST00000372038.7	847	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.76017139089283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGGAGACCATCAGCCA	-133162744	False	NA	NA	False	NA	NA	NA	133163897	133154074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156103_133161466_133161533_133162341_133162533_133163753
transcript_95121.known	chr9	-	1512	7	FSM	ENSG00000148288.13	ENST00000646215.1	1512	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGTGCACACAGTAGC	-133162761	True	NA	NA	False	NA	NA	NA	133163914	133153426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133154262_133155177_133155350_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_95124.known	chr9	-	1935	7	FSM	ENSG00000148288.13	ENST00000372043.7	1935	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.59770474137791	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	-133162766	True	NA	-21	True	AATAAA	-17	NA	133163919	133152952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133154243_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_95125.known	chr9	-	1449	6	FSM	ENSG00000148288.13	ENST00000540636.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTCACAGTAACGCGGC	-133162761	True	NA	NA	False	NA	NA	NA	133163914	133153401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133161466_133161533_133162341_133162533_133163753
transcript_95126.known	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	557	junction_3	51.8700298823897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	-133316829	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
transcript_9513.known	chr1	+	10008	10	FSM	ENSG00000198625.14	ENST00000391947.6	10008	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	9.52190457139047	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	204512992	True	NA	10	True	ATTAAA	-17	NA	204516378	204558119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_95130.nic	chr9	-	273	2	ISM	ENSG00000148296.7	ENST00000372022.6	4235	5	-80	5783	-80	-2753	5prime_fragment	FALSE	canonical	3	588	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGAAAACACAAA	-133316909	True	NA	NA	False	NA	NA	NA	133336268	133334558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_133334602_133336038
transcript_95131.known	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	85.0951673128386	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-133338507	True	NA	NA	False	NA	NA	NA	133348131	133338311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
transcript_95132.nic	chr9	-	1397	5	NIC	ENSG00000148297.16	novel	4044	5	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	142.480700447464	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-133338473	True	NA	-9	True	ATTAAA	-20	NA	133348097	133340904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347941
transcript_95133.known	chr9	-	3867	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	12.1928941054479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-133338493	True	NA	-9	True	ATTAAA	-20	NA	133348117	133340904	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
transcript_95139.known	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	1941.44053396924	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	133241170	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_95148.known	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1042.24878537336	21869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_95149.known	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1101.84219479117	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
transcript_9515.known	chr1	+	9782	8	FSM	ENSG00000198625.14	ENST00000614459.4	9782	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.1574995370095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	204512992	True	NA	10	True	ATTAAA	-17	NA	204516378	204558119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204516510_204525483_204525597_204537458_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_95151.nnic	chr9	-	1000	9	NNC	ENSG00000148290.10	novel	1092	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	130.150633882436	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356467	False	NA	-2	True	TATAAA	-25	NA	133356501	133351804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356458
transcript_95152.known	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	137.467621419647	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356451	False	NA	-2	True	TATAAA	-25	NA	133356485	133351804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
transcript_95155.known	chr9	+	833	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	31.4044582822248	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350446	True	NA	14	True	AATAAA	-16	NA	133356549	133361158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_95157.nic	chr9	+	967	6	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_2	207.705945990961	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350426	True	NA	14	True	AATAAA	-16	NA	133356529	133361158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133356671_133356913_133357183_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_9516.known	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	11.1586538415508	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204827626	True	NA	3	True	ATTAAA	-14	NA	204828694	204977139	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_95161.nnic	chr9	+	673	5	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	27	junction_3	229.221508589399	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350426	True	NA	14	True	AATAAA	-16	NA	133356529	133361158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133356671_133356913_133357069_133357710_133357815_133360264_133360435_133361055
transcript_95166.nnic	chr9	+	503	4	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	88	junction_3	229.739465965737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350426	True	NA	14	True	AATAAA	-16	NA	133356529	133361158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133356671_133356913_133357069_133357710_133357815_133361055
transcript_95173.known	chr9	-	2930	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	41.6797312851223	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATCCTATAGCG	-133359154	True	NA	-15	True	AATAAA	-18	NA	133376060	133361463	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_95178.known	chr9	-	2863	5	FSM	ENSG00000148248.14	ENST00000545297.5	2863	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	642.721946101111	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133363760_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_95180.known	chr9	-	2326	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_6	19.2491717288017	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGGAGGCTCAG	-133410878	True	NA	-37	True	AATAAA	-20	NA	133418010	133406061	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
transcript_95183.known	chr9	+	2880	6	FSM	ENSG00000160325.15	ENST00000540581.5	2880	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	46.1761843378164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGCCTGTGTGTGAGT	133458853	True	NA	35	True	AATAAA	-43	NA	133459964	133470787	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468339_133468465_133468562
transcript_95185.known	chr9	+	2803	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	13.683932183404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	133458866	True	NA	96	True	NA	NA	NA	133459977	133470848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
transcript_95188.known	chr9	+	2688	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	37.3838943337309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	133458855	True	NA	96	True	NA	NA	NA	133459966	133470848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
transcript_95189.known	chr9	+	795	3	FSM	ENSG00000160325.15	ENST00000489519.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGGTTGCAGAGCAGA	133458886	True	NA	NA	False	NA	NA	NA	133459997	133465853	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133465321
transcript_9519.known	chr1	-	4367	14	FSM	ENSG00000117222.14	ENST00000264515.11	4367	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	15.1302041269468	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-205118165	True	NA	NA	False	AATAAA	-21	NA	205121978	205086141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_95191.known	chr9	-	2491	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.5365375376581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCGAGGAAAGAGTG	-133477247	True	NA	-15	True	AATAAA	-16	NA	133479099	133471093	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_95195.known	chr9	-	2301	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.3878705642539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	-133477244	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_95200.nic	chr9	-	1560	4	ISM	ENSG00000123453.19	ENST00000427237.6	1957	15	3	36210	0	-5171	5prime_fragment	FALSE	canonical	3	36	junction_3	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGTTGTTATTTTGT	-133737627	True	NA	NA	False	AATATA	-19	NA	133738352	133730563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_133731485_133732422_133732602_133733842_133734204_133738253
transcript_95201.known	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	28.745966299855	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-134060606	True	NA	1	True	AATAAA	-26	NA	134068026	134030304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_95204.nic	chr9	-	2532	6	ISM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	16527	0	1170	5prime_fragment	FALSE	canonical	3	192	junction_1	25.3408760700967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTTAAAGTCATGATC	-134060606	True	NA	-8	True	AATAAA	-19	NA	134068026	134046831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_95205.known	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	12.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	134024444	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_134025537_134025844_134026091_134026207
transcript_95206.known	chr9	+	2300	2	FSM	ENSG00000235106.10	ENST00000432807.1	2300	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCTCACACTTATT	134024458	True	NA	NA	False	AATAAA	-19	NA	134025494	134028102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_134025537_134025844
transcript_95207.known	chr9	+	3157	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	27.1105560348863	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	134126613	True	NA	22	True	AATAAA	-19	NA	134136081	134159968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
transcript_95210.nic	chr9	+	713	4	NIC	ENSG00000130558.20	novel	1057	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	90.7119984713525	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	135086783	True	NA	18	True	AATAAA	-17	NA	135087647	135098107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_135087728_135090194_135090345_135095863_135096020_135097780
transcript_95211.known	chr9	+	881	5	FSM	ENSG00000122140.11	ENST00000485333.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	267.709730865353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACCTCTACTGCAGGC	135487391	True	NA	NA	False	NA	NA	NA	135500706	135503976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503135_135503279_135503541
transcript_95213.known	chr9	+	854	4	FSM	ENSG00000122140.11	ENST00000472852.1	854	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	295.064211467418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGACGACTCTCCGCTGG	135487399	True	NA	NA	False	NA	NA	NA	135500714	135503955	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_135500754_135500997_135501124_135501698_135501974_135503541
transcript_95214.known	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	47.6864760702655	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	135487366	True	NA	14	True	AATAAA	-22	NA	135500681	135504671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
transcript_95215.known	chr9	+	551	4	FSM	ENSG00000122140.11	ENST00000462948.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	294.13262314813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAGACAGCCACGCAC	135487399	True	NA	NA	False	NA	NA	NA	135500714	135503594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_135500754_135500997_135501327_135501843_135501974_135503541
transcript_95216.known	chr9	-	1278	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	63.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	-135500421	True	NA	-1	True	ATTAAA	-19	NA	135500518	135495180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_135495570_135498584_135498664_135499708
transcript_95217.known	chr9	-	675	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	-135498319	True	NA	-1	True	ATTAAA	-19	NA	135499869	135495180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_135495616_135498584_135498664_135499708
transcript_9522.known	chr1	-	3391	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	5.66911711723165	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCCTGCTGTTCTCTT	-205320043	True	NA	-6	True	ATTAAA	-20	NA	205321745	205302062	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
transcript_95220.known	chr9	-	1860	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	35.9468056926644	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-135957935	True	NA	-5	True	AATAAA	-14	NA	135961373	135932968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_95229.known	chr9	-	775	2	FSM	ENSG00000260193.1	ENST00000563018.1	775	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACTCGAGTGCTGCTA	-136109404	False	52	NA	False	NA	NA	NA	136109424	136108104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136108820_136109364
transcript_95230.known	chr9	-	3096	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGGGGGGGCGCTACG	-136362073	True	NA	NA	False	AATAAA	-18	NA	136363744	136359482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136362181_136362988_136363129_136363486
transcript_95231.nic	chr9	-	437	3	ISM	ENSG00000165684.6	ENST00000682081.1	2257	10	-53	5800	-47	-3683	5prime_fragment	FALSE	canonical	3	67	junction_2	22.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCCCCAGAAATAACCAC	-136394194	True	NA	-8	True	ATTAAA	-19	NA	136400223	136396815	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_136397024_136398298_136398438_136400133
transcript_95233.known	chr9	+	2086	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_6	108.476155854127	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	136403264	True	NA	26	True	AATAAA	-19	NA	136410657	136423761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_95240.nic	chr9	+	2668	12	NIC	ENSG00000165688.12	novel	2086	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	985	junction_6	68.2879174482682	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	136403241	True	NA	26	True	AATAAA	-19	NA	136410634	136423761	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_95242.known	chr9	+	1987	12	FSM	ENSG00000165688.12	ENST00000399219.7	1987	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	317.498122594827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGGTGTTTTCCTTCTC	136403267	True	NA	25	True	AATAAA	-18	NA	136410660	136423760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_95249.known	chr9	+	416	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_2	52.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGATGTTTGAGATTT	136403250	True	NA	NA	False	NA	NA	NA	136410643	136412606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136410740_136411996_136412200_136412489
transcript_9525.nic	chr1	-	1196	4	Fusion	ENSG00000281406.2_ENSG00000186007.10	novel	741	4	NA	NA	307	0	multi-exon	FALSE	canonical	2	5	junction_2	10.6144555520604	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	-205456425	False	NA	NA	False	ATTAAA	-35	NA	205456439	205381380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_-_205381857_205384287_205384365_205420454_205420575_205455916
transcript_95256.nnic	chr9	+	1172	4	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-75	-150	intron_retention	FALSE	canonical	2	20	junction_1	3.55902608401044	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	136545429	True	NA	5	True	TATAAA	-16	NA	136546136	136549743	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_136546372_136547841_136548102_136548743_136548809_136549131
transcript_95257.known	chr9	+	738	3	FSM	ENSG00000237886.1	ENST00000429224.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGCAGCTGTGGGAAC	136545504	True	NA	NA	False	NA	NA	NA	136546211	136549449	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136546372_136547841_136548102_136549131
transcript_95258.known	chr9	+	1282	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	131.034108155091	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	136660243	True	NA	NA	False	AATAAA	-13	NA	136665791	136672678	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
transcript_95267.known	chr9	-	1546	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_5	32.2738284063109	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-136683181	True	NA	-5	True	TATAAA	-19	NA	136687457	136673142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_95269.known	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	121.783362985262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-136720034	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
transcript_9527.known	chr1	-	637	3	FSM	ENSG00000186007.10	ENST00000495594.2	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGCGTTTTTCTTTC	-205455940	False	40	NA	False	ATTAAA	-38	NA	205455954	205381377	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205381857_205420454_205420575_205455916
transcript_95270.known	chr9	-	1254	3	FSM	ENSG00000233016.8	ENST00000668354.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-136719755	False	NA	-18	True	ATTAAA	-14	NA	136727905	136724657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136725111_136726310_136727087_136727880
transcript_95272.known	chr9	-	1995	6	FSM	ENSG00000187922.14	ENST00000497771.6	1995	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.49857113690718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	-136742779	True	NA	-2	True	AATAAA	-21	NA	136742940	136738169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136739554_136739949_136740049_136740835_136740944_136741251_136741362_136741880_136742021_136742786
transcript_95275.known	chr9	-	443	4	FSM	ENSG00000187922.14	ENST00000532006.1	443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	-136742798	True	NA	NA	False	NA	NA	NA	136742959	136739460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136739554_136739949_136740049_136741880_136741959_136742786
transcript_95276.known	chr9	-	1780	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	-136742779	True	NA	1	True	AATAAA	-24	NA	136742940	136738166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
transcript_95277.nnic	chr9	-	1682	3	NIC	ENSG00000187922.14	novel	1995	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	-136742824	True	NA	-2	True	AATAAA	-21	NA	136742985	136738169	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_136739554_136739949_136740049_136742786
transcript_95278.nnic	chr9	-	433	4	NNC	ENSG00000177984.7	novel	767	7	NA	NA	1295	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCACCTCTTTGGAC	-136763108	True	NA	0	True	AATAAA	-18	NA	136763169	136759633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_136759784_136761786_136761854_136762187_136762290_136763055
transcript_95280.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	44.1616349335031	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	136787567	True	NA	12	True	AAAACA	-30	NA	136791343	136793317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
transcript_95281.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	138.378782694458	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787591	True	NA	27	True	AATAAA	-19	NA	136791367	136793256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
transcript_95284.known	chr9	+	551	4	FSM	ENSG00000244187.8	ENST00000489739.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	41.4755617469158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCTGGAACACAGCCT	136787627	False	NA	NA	False	NA	NA	NA	136791403	136792869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791710_136791778_136791946_136792359_136792818
transcript_95285.nnic	chr9	+	694	4	NIC	ENSG00000244187.8	novel	839	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	149.800608217131	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787567	True	NA	27	True	AATAAA	-19	NA	136791343	136793256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136791425_136791710_136791778_136792250_136792359_136792818
transcript_95287.known	chr9	+	491	4	FSM	ENSG00000244187.8	ENST00000479737.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	182.970550150078	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGCCGACCCTCCCCA	136787602	True	NA	NA	False	NA	NA	NA	136791378	136792902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791777_136792031_136792250_136792359_136792818
transcript_95288.known	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	169.305115759159	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787595	True	NA	27	True	AATAAA	-19	NA	136791371	136793256	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
transcript_95298.known	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_2	188.5	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	136819367	True	NA	6	True	ATTAAA	-15	NA	136849408	136851024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136849591_136850012_136850138_136850754
transcript_95299.known	chr9	+	618	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	1647.42472429614	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	136819384	True	NA	9	True	ATTAAA	-18	NA	136849425	136851027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
transcript_9530.known	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	21.9048447203403	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	205502026	True	NA	16	True	AATATA	-20	NA	205504668	205532790	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_95300.known	chr9	+	627	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136849628	False	NA	4	True	ATTAAA	-13	NA	136849778	136851022	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136850138_136850754
transcript_95302.known	chr9	-	662	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_1	149.47136013297	2498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-136847792	True	NA	-15	True	NA	NA	NA	136866308	136862118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_95303.known	chr9	-	790	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	810.257790767852	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-136847769	True	NA	-15	True	NA	NA	NA	136866285	136862118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_95309.known	chr9	+	2266	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	70.7814241167836	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882779	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_9531.known	chr1	+	2143	16	FSM	ENSG00000117266.16	ENST00000506784.5	2143	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	32.7972898609355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTAGTCCCCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	205504597	205531786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_205504797_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_95318.known	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_8	51.3771289096617	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944541	False	197	-2	True	AATAAA	-16	NA	136944738	136940434	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_95321.known	chr9	+	754	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	4.58693797647189	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	NA	False	NA	-40	True	NA	NA	NA	136978811	136981692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_95324.known	chr9	+	808	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	71.7139378983534	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988525	True	NA	23	True	AATAAA	-18	NA	136992421	136993976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95327.nic	chr9	+	889	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	189	junction_2	74.8534568340033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988522	True	NA	23	True	AATAAA	-18	NA	136992418	136993976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136992563_136992639_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95328.nnic	chr9	+	761	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	141.791396071835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988522	True	NA	23	True	AATAAA	-18	NA	136992418	136993976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136992563_136992639_136992701_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95329.known	chr9	+	958	6	FSM	ENSG00000148362.11	ENST00000493968.5	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	53.8961965262856	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGCTCTGGTGGGGCT	136988594	False	NA	18	True	AATAAA	-13	NA	136992490	136993971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992639_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95330.nic	chr9	+	747	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	134.181369794767	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988525	True	NA	23	True	AATAAA	-18	NA	136992421	136993976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136992563_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95332.known	chr9	+	1077	5	FSM	ENSG00000148362.11	ENST00000498095.4	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	44.8441746495573	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	136988566	True	NA	31	True	AATAAA	-26	NA	136992462	136993984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992639_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95333.known	chr9	+	705	5	FSM	ENSG00000148362.11	ENST00000483807.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	149.53260514015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCGCCACCACCTCCAC	136988550	True	NA	-72	True	NA	NA	NA	136992446	136993881	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95336.known	chr9	+	2700	13	FSM	ENSG00000177239.16	ENST00000684759.1	2700	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	85.6470064988977	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	137082201	True	NA	8	True	GATAAA	-17	NA	137086984	137109183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107537_137107663_137108387
transcript_95338.known	chr9	+	2755	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	82.8413393179999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	137086825	False	NA	0	True	GATAAA	-9	NA	137086903	137109175	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
transcript_95339.known	chr9	+	2801	13	FSM	ENSG00000177239.16	ENST00000683324.1	2801	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	85.1394281295231	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATTTGCTCTAACC	137086791	True	NA	-10	True	NA	NA	NA	137086869	137109165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096239_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_95340.known	chr9	+	2690	13	FSM	ENSG00000177239.16	ENST00000682117.1	2690	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	84.4137873809723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTCGCCTGTGTCTTT	137082181	True	NA	10	True	GATAAA	-19	NA	137086964	137109185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108426
transcript_95342.known	chr9	-	1601	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	29.1836855109152	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-137113733	True	NA	-6	True	AATAAA	-17	NA	137114733	137110545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_95345.known	chr9	-	958	5	FSM	ENSG00000176978.14	ENST00000483783.1	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	22.3941956765587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGCTTCACTCAAGCA	-137112570	False	NA	-72	True	NA	NA	NA	137112604	137110611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111
transcript_95346.known	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	12.6301557129488	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	-137184227	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_95347.known	chr9	+	723	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	380	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177370	True	NA	13	True	AATAAA	-20	NA	137188705	137190370	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137188779_137189065_137189152_137189806
transcript_95348.known	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	104	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	137177340	True	NA	9	True	AATAAA	-16	NA	137188675	137190366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137188779_137189065_137189266_137189806
transcript_9535.known	chr1	+	1134	7	FSM	ENSG00000117266.16	ENST00000512922.5	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	30.1464020333365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCCTCGGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	205504595	205526835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774
transcript_95351.known	chr9	+	4817	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	14.6767940649063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137200389	True	NA	6	True	AATAAA	-15	NA	137205699	137219361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_95352.known	chr9	+	762	2	FSM	ENSG00000197191.6	ENST00000650725.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTTGCTGCAGGCTC	137224947	True	NA	12	True	AATAAA	-25	NA	137225173	137226315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137225234_137225613
transcript_95355.known	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	88.3037686373325	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	137223252	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
transcript_95356.known	chr9	+	2035	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	64	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTTCGCTTTGCCCA	137223253	True	NA	20	True	ATTAAA	-14	NA	137241287	137243706	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137241418_137241720_137241830_137241910
transcript_95361.known	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_1	12.4638252063927	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421605	True	NA	-5	True	AATAAA	-14	NA	137423155	137366144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_95363.nic	chr9	-	1157	7	ISM	ENSG00000187609.16	ENST00000340951.9	2781	22	-57	59249	-8	0	5prime_fragment	FALSE	canonical	2	65	junction_5	11.8977121983832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421669	True	NA	-5	True	AATAAA	-14	NA	137423219	137366144	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_95365.known	chr9	-	1585	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGCAGTTGAGGTCAG	-137421612	True	NA	-2	True	AATAAA	-21	NA	137423162	137391801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137393236_137395302_137395405_137423113
transcript_95366.known	chr9	-	2781	22	FSM	ENSG00000187609.16	ENST00000340951.9	2781	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.5708382476164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTCACATGTTTCAT	-137421612	True	NA	-1	True	AATAAA	-37	NA	137423162	137306895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109_137349283_137349368_137349532_137351037_137351148_137351317_137351529_137352065_137352202_137352619_137352787_137354338_137354378_137354699_137354774_137356267_137356369_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_95367.known	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	2190	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	137525080	True	NA	18	True	ATTAAA	-16	NA	137551878	137552555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137551979_137552073
transcript_95371.known	chr9	-	2302	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_7	41.6863286941894	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGACAACCAGTTACAG	-137575460	True	NA	NA	False	AATAAA	-19	NA	137578925	137554443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_95376.nic	chr9	+	1620	8	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	96.6117836223609	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	137601013	True	NA	12	True	AATAAA	-17	NA	137605668	137615360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_137605836_137612895_137613007_137613412_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_95378.known	chr9	+	1556	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	36.8776244309943	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	137601030	True	NA	12	True	AATAAA	-17	NA	137605685	137615360	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_95381.nic	chr9	+	1645	7	ISM	ENSG00000197070.14	ENST00000371421.9	1556	8	-17	1	-16	0	intron_retention	FALSE	canonical	3	226	junction_4	39.8315899200064	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	137601013	True	NA	11	True	AATAAA	-16	NA	137605668	137615359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_95384.nic	chr9	+	2098	6	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	226	junction_3	40.5926101649056	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	137601013	True	NA	11	True	AATAAA	-16	NA	137605668	137615359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_137605836_137612895_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_95386.known	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	116	junction_2	46.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	-137617133	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137616200_137617933_137618192_137618530
transcript_95387.known	chr9	-	1825	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	0	16	0	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTACAGGAGTTG	-137618887	False	NA	-16	True	AATAAA	-2	NA	137618906	137615347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137616200_137617933
transcript_95388.known	chr9	-	2210	2	FSM	ENSG00000203993.7	ENST00000623970.1	2210	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGCTCTACAAATAAAGT	-137617151	True	NA	-35	True	NA	NA	NA	137618831	137615366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137616133_137617387
transcript_95389.nnic	chr9	+	1206	4	NNC	ENSG00000181090.21	novel	5095	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	200.824965247518	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604815	True	NA	15	True	AATAAA	-20	NA	137618993	137836127	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_137619050_137710966_137711031_137716625_137716826_137835241
transcript_95396.known	chr9	+	1735	5	FSM	ENSG00000159247.13	ENST00000503395.5	1735	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	21.2720473861826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACGCAGATGAGACCTT	138149458	True	NA	NA	False	NA	NA	NA	138150112	138176508	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_138150309_138174045_138174873_138175362_138175472_138175600_138175902_138176206
transcript_95397.nnic	chr9	+	1694	4	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	21.2759645296439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150005	False	NA	25	True	AATAAA	-15	NA	138150061	138177433	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_138150309_138175362_138175472_138175600_138175712_138176206
transcript_95399.known	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-105703	True	NA	NA	False	NA	NA	NA	647	1601	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_600_1600
transcript_9540.known	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	24.2859126976022	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	-205742774	True	NA	-1	True	AATAAA	-21	NA	205750182	205712821	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_95400.known	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-5784	False	NA	NA	False	NA	NA	NA	1670	3229	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_1700_3200
transcript_95401.known	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	3041	False	NA	NA	False	NA	NA	NA	3306	4262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_3300_4300
transcript_95402.known	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	4024	False	NA	NA	False	NA	NA	NA	4469	5511	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_4500_5500
transcript_95403.known	chrM	-	66	1	FSM	ENSG00000210140.1	ENST00000387405.1	66	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTTTTTTCCCGGC	NA	False	NA	NA	False	GGGGCT	-2	NA	5826	5760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_-_5800_5800
transcript_95404.known	chrM	+	1542	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	-93	True	NA	NA	False	CATAAA	-8	NA	5903	7445	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_5900_7400
transcript_95405.known	chrM	+	684	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCTCTACCCCCTCTA	1651	True	NA	NA	False	NA	NA	NA	7585	8269	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_7600_8300
transcript_95406.known	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	867	True	NA	NA	False	AATGAA	-42	NA	8365	8572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_8400_8600
transcript_95407.known	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	8201	False	NA	NA	False	NA	NA	NA	8526	9207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_8500_9200
transcript_95408.known	chrM	+	784	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	528	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	4564	True	NA	NA	False	NA	NA	NA	9206	9990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_9200_10000
transcript_95409.known	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	8743	False	NA	NA	False	AAAAAG	-19	NA	10058	10404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_10100_10400
transcript_95410.known	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-421	False	NA	NA	False	NA	NA	NA	10759	12137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_10800_12100
transcript_95411.known	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-1540	True	NA	NA	False	NA	NA	NA	10469	10766	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_10500_10800
transcript_95412.known	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	10068	True	NA	NA	False	NA	NA	NA	12336	14148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_12300_14100
transcript_95413.known	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	NA	False	NA	NA	False	NA	NA	NA	14673	14148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_-_14100_14700
transcript_95414.known	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	14461	False	NA	NA	False	AAAACA	-19	NA	14746	15887	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_14700_15900
transcript_95419.nnic	chrX	+	2129	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_7	55.1476681839083	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276715	True	NA	13	True	AATAAA	-21	NA	281369	303356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_95420.nnic	chrX	+	1959	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.7635494298491	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276715	True	NA	13	True	AATAAA	-21	NA	281369	303356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_95421.nnic	chrX	+	1963	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.7635494298491	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276715	True	NA	13	True	AATAAA	-21	NA	281369	303356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299467_302832
transcript_95431.nic	chrX	+	1798	7	NIC	ENSG00000182378.15	novel	5287	8	NA	NA	0	-3286	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	75.24349362791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGATGGGGTCTCTCT	274682	True	NA	NA	False	NA	NA	NA	276321	300067	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_276395_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_95432.known	chrX	+	5318	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	17.4706102418382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276726	True	NA	13	True	AATAAA	-21	NA	281380	303356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_95439.nic	chrX	+	1335	6	ISM	ENSG00000182378.15	ENST00000381657.8	5318	7	-11	9872	-11	1845	5prime_fragment	FALSE	canonical	3	181	junction_1	18.3150211575089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGGTTCATGCCTGTC	276715	True	NA	2	True	AATAAA	-15	NA	281369	293484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034
transcript_95441.nic	chrX	+	1071	6	NIC	ENSG00000182378.15	novel	587	5	NA	NA	5	1845	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	80.1214078757981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGGTTCATGCCTGTC	282827	True	NA	2	True	AATAAA	-15	NA	283469	293484	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_283521_284166_284315_288732_288870_290647_290777_291498_291655_293034
transcript_95445.known	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_8	33.1588023432618	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	NA	False	NA	-5	True	ATTAAA	-22	NA	318819	304749	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_95446.nnic	chrX	+	1019	7	NNC	ENSG00000185291.12	novel	1476	10	NA	NA	18719	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.03442593595562	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGTCCCGGTCTCTG	NA	False	NA	NA	False	GATAAA	-24	NA	1355514	1382689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_1355789_1356220_1356337_1358860_1358888_1365137_1365253_1378658_1378765_1381022_1381105_1382390
transcript_9545.nic	chr1	-	814	6	ISM	ENSG00000069275.13	ENST00000367142.5	6399	7	-110	6742	-110	-1112	5prime_fragment	FALSE	canonical	3	50	junction_5	18.5967739137733	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATGCCCAAACC	NA	False	NA	51	True	AAAAAG	-43	NA	205750292	205719563	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_9546.known	chr1	-	1723	6	FSM	ENSG00000117280.13	ENST00000235932.8	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	23.9131762842162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	-205774573	True	NA	NA	False	NA	NA	NA	205775449	205769436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775373
transcript_95462.known	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4968	junction_3	246.725668619128	1773	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	NA	False	NA	-27	True	AATAAA	-18	NA	1392113	1386151	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
transcript_95474.known	chrX	-	2065	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	0	0	0	multi-exon	TRUE	canonical	1	187	junction_11	84.1966530741507	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCCTCCATAGGG	NA	False	NA	-2	True	AATAAA	-16	NA	1452909	1403138	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_95476.nnic	chrX	-	1984	12	NIC	ENSG00000169093.16	novel	2065	13	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	24	junction_9	146.185606011531	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	NA	False	NA	-4	True	AATAAA	-14	NA	1452895	1403140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1439096_1439145_1442185_1442318_1452747
transcript_95481.nnic	chrX	-	1748	9	NNC	ENSG00000169093.16	novel	874	3	NA	NA	-28	4790	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	168.792355795516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGAATATGGAGAAAGGC	NA	False	NA	NA	False	ATTAAA	-22	NA	1452957	1422936	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_1423508_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_95482.nic	chrX	-	1473	8	ISM	ENSG00000169093.16	ENST00000381317.9	2065	13	-48	22090	-28	2498	5prime_fragment	FALSE	canonical	1	187	junction_6	105.599551637886	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTAGTTGCTTATTTA	NA	False	NA	-3	True	NA	NA	NA	1452957	1425228	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_95486.known	chrX	-	851	2	FSM	ENSG00000169093.16	ENST00000474865.6	851	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAATCTCTTGTGGCCG	NA	False	NA	NA	False	NA	NA	NA	1452872	1441591	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1442318_1452747
transcript_95487.known	chrX	+	1087	8	FSM	ENSG00000196433.13	ENST00000381229.9	1087	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.35526185435788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAACTAACGTCAAAGC	1615110	True	NA	NA	False	NA	NA	NA	1615163	1643027	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1633149_1633291_1636437_1636561_1642802
transcript_95488.known	chrX	+	989	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5723301886761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	1615121	False	NA	NA	False	AATAAA	-15	NA	1615174	1643081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
transcript_9549.known	chr1	-	3308	6	FSM	ENSG00000117280.13	ENST00000367139.8	3308	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	23.9131762842162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	-205774606	True	NA	-12	True	AATAAA	-19	NA	205775482	205767985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775272
transcript_95491.known	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	58.6451191489965	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	NA	False	NA	NA	False	AATAAA	-30	NA	2500976	2219505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
transcript_95493.nnic	chrX	-	1350	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	16	5	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCAGGTGCACCTCT	NA	False	NA	-2	True	AATAAA	-17	NA	2609191	2566028	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2567293_2609105
transcript_95496.known	chrX	+	573	11	FSM	ENSG00000002586.20	ENST00000623253.4	573	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	300.929493403355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTGTCGGCAGAAACAG	2691302	False	NA	NA	False	NA	NA	NA	2691360	2740804	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356_2733375_2738202_2738257_2740778
transcript_95499.known	chrX	+	1089	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	199.353399213	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	2683423	False	NA	-8	True	NA	NA	NA	2691312	2741290	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
transcript_955.known	chr1	+	1922	9	FSM	ENSG00000142655.13	ENST00000356607.9	1922	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	8.27552868401772	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471629	True	NA	10	True	AATAAA	-21	NA	10474949	10630758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_95503.nic	chrX	+	1244	10	NIC	ENSG00000002586.20	novel	604	8	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	233.901583186784	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTTTTTTTTTTTACTT	2691389	False	NA	11	True	AATAAA	-18	NA	2691447	2741309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_2691696_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_95508.known	chrX	+	892	9	FSM	ENSG00000002586.20	ENST00000381187.8	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	229.837986416519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCACCGAGGCACCC	2683386	True	NA	NA	False	NA	NA	NA	2691275	2741101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_95510.known	chrX	+	583	3	FSM	ENSG00000002586.20	ENST00000647297.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCTCCACCTCCCGGGT	2683402	True	NA	NA	False	NA	NA	NA	2691291	2718018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2717604
transcript_95511.known	chrX	+	2313	10	FSM	ENSG00000124343.14	ENST00000381174.10	2313	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.2282590869912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTGATTATTGAATA	2752035	True	NA	NA	False	AATAAA	-17	NA	2752051	2815927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2752336_2770549_2770592_2774715_2774740_2782065_2782129_2789643_2789707_2794534_2794604_2797309_2797361_2808184_2808221_2811335_2811453_2814363
transcript_95515.nnic	chrX	+	311	3	NNC	ENSG00000124343.14	novel	2943	11	NA	NA	7016	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATTTCCTTTTATTCT	2801443	True	NA	16	True	ACTAAA	-26	NA	2801550	2814447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_2801661_2811335_2811453_2814363
transcript_95518.known	chrX	+	3192	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	45.7475682413831	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2826403	True	NA	29	True	ATTAAA	-14	NA	2828929	2882818	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_9552.known	chr1	-	1157	5	FSM	ENSG00000117280.13	ENST00000414729.1	1157	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	8.40758586040012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTCTTCCCTTTGGTT	-205774583	True	NA	NA	False	NA	NA	NA	205775459	205770299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832
transcript_95527.nic	chrX	+	2450	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-1	-529	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	70.249110314651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGAAGGTTTATTTCT	2826402	True	NA	30	True	AATAAA	-24	NA	2828928	2882288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_9553.known	chr1	-	1306	5	FSM	ENSG00000117280.13	ENST00000437324.6	1306	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	29.8024747294583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	-205774575	True	NA	NA	False	NA	NA	NA	205775451	205769702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205775272
transcript_95531.known	chrX	-	2890	12	FSM	ENSG00000157399.17	ENST00000681963.1	2890	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	14.3025166831252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACAAACAAACATTAAT	NA	False	NA	NA	False	AATAAA	-4	NA	2964252	2934044	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2959602_2959887_2960377_2960421_2964223
transcript_95533.known	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.5191145493046	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	NA	False	NA	NA	False	NA	NA	NA	2964341	2934520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_95534.nic	chrX	-	2014	11	NIC	ENSG00000157399.17	novel	2976	12	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	11.438531374263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGATTCCTAAATTTT	NA	False	NA	0	True	AATAAA	-21	NA	2964378	2934810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_95536.known	chrX	-	1294	9	FSM	ENSG00000157399.17	ENST00000682364.1	1294	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.2807067899361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	NA	False	NA	-21	True	NA	NA	NA	2964288	2934831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_95538.known	chrX	-	1338	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.9666357451806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGACCTCCCAGACTCAA	NA	False	NA	NA	False	NA	NA	NA	2964288	2951737	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_95539.nic	chrX	-	1304	6	NIC	ENSG00000157399.17	novel	1407	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	15.6792856980157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	NA	False	NA	NA	False	AATAAA	-35	NA	2964378	2951909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_95541.known	chrX	-	973	5	FSM	ENSG00000157399.17	ENST00000683071.1	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	16.9558249578132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	NA	False	NA	NA	False	AATAAA	-35	NA	2964257	2951909	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2960377_2960421_2964223
transcript_95542.known	chrX	-	1271	4	FSM	ENSG00000285756.2	ENST00000475317.5	1271	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.6333157709821	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843415	3817527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_3817779_3818441_3818501_3828505_3829388_3843336
transcript_95543.nnic	chrX	-	2044	4	NNC	ENSG00000146938.16	novel	894	2	NA	NA	2	-43118	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	51.0968579160098	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTTATTTCTTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	6228865	5935322	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_5936112_6029279_6029433_6150994_6151772_6228540
transcript_95544.known	chrX	-	1334	5	FSM	ENSG00000130021.15	ENST00000424830.6	1334	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	58.0834528932294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATCTATCGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	7148158	7049762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7116965_7117035_7148052
transcript_95546.known	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	16.739839372653	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	7148153	7048919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
transcript_95547.known	chrX	-	1376	4	FSM	ENSG00000130021.15	ENST00000412827.6	1376	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	54.3507129668048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTACCTGGTATCTAC	NA	False	NA	NA	False	NA	NA	NA	7148153	7049517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7050473_7077219_7077450_7105748_7105839_7148052
transcript_95549.nnic	chrX	-	1910	3	NIC	ENSG00000130021.15	novel	2103	4	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	66.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	7148190	7048919	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_7050473_7105619_7105839_7148052
transcript_95552.known	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	17.1634301156072	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	NA	False	NA	-5	True	ATTAAA	-17	NA	7927413	7898246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
transcript_95553.nic	chrX	-	870	7	NIC	ENSG00000006757.12	novel	2752	7	NA	NA	0	1389	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	50.6940715359192	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTTAGATAGTTTTTG	NA	False	NA	-1	True	AATAAA	-26	NA	7927739	7900659	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
transcript_95554.known	chrX	-	2752	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	51.0547092179882	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
transcript_95558.nic	chrX	-	1378	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-24	-67	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	41.5645206275737	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAGCCTGACTTGGAT	NA	False	NA	-10	True	AATAAA	-15	NA	9786321	9725412	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
transcript_95561.known	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	16.7913852103973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	NA	False	NA	-1	True	AATAAA	-22	NA	10620585	10445555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_95562.nic	chrX	-	2091	2	FSM	ENSG00000101871.17	ENST00000693721.1	1992	2	6	-105	0	105	multi-exon	FALSE	canonical	3	168	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTCTCTAAGTATGGAT	NA	False	NA	NA	False	NA	NA	NA	10620585	10565808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_10567604_10620289
transcript_95563.known	chrX	-	1071	4	FSM	ENSG00000234129.9	ENST00000433747.6	1071	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAAAAAAATTAAAATTT	NA	False	NA	NA	False	TTTAAA	-20	NA	11111114	10969890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_10970539_11055935_11056037_11106900_11106991_11110882
transcript_95565.known	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	22.341416447685	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	11105707	True	NA	31	True	AATAAA	-27	NA	11111331	11123086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_95567.known	chrX	+	2277	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	112.466291246163	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	11105676	True	NA	23	True	AATAAA	-19	NA	11111300	11123078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_95569.known	chrX	+	1000	7	FSM	ENSG00000004961.15	ENST00000380763.7	1000	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	129.344071719151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTGCACTCATGATGT	11105717	True	NA	29	True	ATTAAA	-15	NA	11111341	11121879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11111424_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_95574.known	chrX	+	2286	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	18.1680045378927	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGTCCTCTTTA	11757876	True	NA	26	True	AATAAA	-40	NA	11758236	11775772	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95575.known	chrX	+	2329	13	FSM	ENSG00000005302.19	ENST00000398527.7	2329	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.1830645144234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCCTGTCTTGTTT	11758531	False	NA	-20	True	NA	NA	NA	11758555	11775726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758774_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95576.known	chrX	+	2230	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	20.3401627875055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	11759314	True	NA	-10	True	AATAAA	-4	NA	11759603	11775736	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95578.known	chrX	+	1646	12	FSM	ENSG00000005302.19	ENST00000468149.5	1646	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	25.8188220151101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTAGGAATGATTC	11757892	False	NA	NA	False	GGGGCT	-31	NA	11758252	11775231	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95580.known	chrX	+	2296	12	FSM	ENSG00000005302.19	ENST00000649785.1	2296	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	24.340219411331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGAGAGTTTTCAC	11759343	True	NA	7	True	AATAAA	-21	NA	11759632	11775753	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768574_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95581.known	chrX	+	3480	9	FSM	ENSG00000005302.19	ENST00000337339.7	3480	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	20.7469877331626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTACTTTTTATTT	11757842	True	NA	6	True	AATAAA	-19	NA	11758202	11767977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
transcript_95583.known	chrX	+	3426	8	FSM	ENSG00000005302.19	ENST00000649851.1	3426	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	12.8444381674223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATAAAGTGCTATCTTT	11759367	True	NA	-21	True	AAAAAG	-22	NA	11759656	11767950	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
transcript_95584.known	chrX	+	2469	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	16.0692943909253	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	12786150	True	NA	9	True	AATAAA	-20	NA	12791411	12824222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
transcript_95585.nic	chrX	+	1743	6	ISM	ENSG00000101911.13	ENST00000380668.10	2469	7	2	2624	2	-1488	5prime_fragment	FALSE	canonical	3	168	junction_2	16.6493243106139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGGCAAATTTGATGT	12786152	True	NA	NA	False	AATAAA	-20	NA	12791413	12821598	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643
transcript_9559.known	chr1	-	5017	11	FSM	ENSG00000133065.11	ENST00000367137.4	5017	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	10.6117859005919	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-205810316	True	NA	-2	True	AATAAA	-16	NA	205813198	205789094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
transcript_95590.known	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	19303.5	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	12975209	False	NA	27	True	AATAAA	-16	NA	12975243	12977227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12975444_12976245_12976362_12976776
transcript_95591.known	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	37669	junction_1	535	16067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	12746358	True	NA	23	True	AATAAA	-12	NA	12975109	12977223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12975169_12976245_12976362_12976776
transcript_95592.known	chrX	+	1702	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	38739	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	12746358	True	NA	26	True	AATAAA	-15	NA	12975109	12977226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12976362_12976776
transcript_95595.known	chrX	+	2034	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	2.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGTGGTTGGTGAC	13685435	True	NA	NA	False	GATAAA	-32	NA	13689127	13710504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13689289_13703813_13703903_13708720
transcript_95597.known	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	13685468	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13689289_13703734_13703903_13708720
transcript_95600.known	chrX	+	737	2	FSM	ENSG00000123595.8	ENST00000618931.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGATTGTTGATGCATTC	13685493	True	NA	NA	False	NA	NA	NA	13689185	13709354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13689289_13708720
transcript_95603.known	chrX	-	2842	6	FSM	ENSG00000196459.15	ENST00000380579.6	2842	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.980865585589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	NA	False	NA	-12	True	AATAAA	-14	NA	13734620	13712244	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734043_13734186_13734524
transcript_95605.known	chrX	-	2716	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.8114341622264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGGTAGTTTAATATCC	NA	False	NA	-11	True	AATAAA	-15	NA	13734635	13712243	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
transcript_95608.nic	chrX	-	2830	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-45	-95	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATACTTGTGTATGCTT	NA	False	NA	-5	True	AATAAA	-16	NA	13938683	13771033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_95609.nic	chrX	-	2408	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938683	13771455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_95611.known	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	170.581765991822	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_95613.known	chrX	-	1830	7	FSM	ENSG00000046653.15	ENST00000356942.9	1830	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	308.207001146235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	NA	False	NA	NA	False	AAAAAG	-44	NA	13817346	13773953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13816843
transcript_95615.known	chrX	+	3612	23	FSM	ENSG00000046651.16	ENST00000340096.11	3612	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	25.7369480682494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTTGTCTTAAATTT	13732866	True	NA	7	True	AATAAA	-21	NA	13734747	13769357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_95617.known	chrX	+	3296	22	FSM	ENSG00000046651.16	ENST00000380550.6	3296	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.4848202067611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	13733016	False	NA	-39	True	NA	NA	NA	13734897	13769311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_95621.nic	chrX	+	1054	8	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-20	22522	-15	-7118	5prime_fragment	FALSE	canonical	3	79	junction_5	8.70139561876632	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	13732846	True	NA	NA	False	ATTAAA	-18	NA	13734727	13746835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_95624.nic	chrX	+	984	5	ISM	ENSG00000046651.16	ENST00000683655.1	4139	23	-39	29471	-7	0	5prime_fragment	FALSE	canonical	3	82	junction_4	7.79021822544144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACTTTTAGGCCAAG	13732900	True	NA	NA	False	NA	NA	NA	13734781	13739314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001
transcript_95627.known	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	22.0737400546441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	NA	False	NA	-19	True	AATAAA	-15	NA	14029892	14006725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
transcript_9563.known	chr1	-	740	5	FSM	ENSG00000196550.11	ENST00000431655.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	143.706297704728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAATTATGATATATA	NA	False	NA	NA	False	NA	NA	NA	206202827	206187280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873_206202006_206202515
transcript_95630.known	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	33.0286071291069	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	NA	False	NA	-14	True	CATAAA	-17	NA	14029893	14008672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
transcript_95634.known	chrX	-	2712	10	FSM	ENSG00000181544.15	ENST00000452869.1	2712	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	19.8463231660143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAAAATGTTGCA	NA	False	NA	NA	False	NA	NA	NA	14873052	14843692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_95636.nnic	chrX	-	3006	10	NNC	ENSG00000181544.15	novel	3017	10	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_9	19.8158185969358	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGCCATTTTATCTCCC	NA	False	NA	0	True	AATAAA	-17	NA	14873079	14843404	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14873006
transcript_95638.known	chrX	-	2894	9	FSM	ENSG00000181544.15	ENST00000324138.7	2894	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	11.146748404804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGGCCATTTTATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	14873069	14843406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14872985
transcript_9564.nnic	chr1	-	1738	5	NIC	ENSG00000196550.11	novel	740	5	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_4	142.601498940229	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	206202894	206186255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873_206202006_206202609
transcript_95641.nic	chrX	-	612	3	ISM	ENSG00000181544.15	ENST00000452869.1	2712	10	-36	21500	-19	150	5prime_fragment	FALSE	canonical	3	66	junction_2	12.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-2	True	AATAAA	-19	NA	14873088	14865192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_14865581_14868922_14869044_14872985
transcript_95642.nnic	chrX	-	582	3	NNC	ENSG00000181544.15	novel	3017	10	NA	NA	-10	150	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	37	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-2	True	AATAAA	-19	NA	14873079	14865192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_14865581_14868922_14869044_14873006
transcript_95643.known	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	9.23861682376353	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	14872289	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
transcript_95646.known	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.26498785752038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-23	NA	15335523	15319455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
transcript_95647.known	chrX	-	854	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	12.214745187682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	NA	False	NA	NA	False	AATAGA	-30	NA	15335554	15321564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
transcript_9565.known	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	86.9495383669299	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
transcript_95650.known	chrX	-	1539	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	54.3073102870809	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493564	15384798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
transcript_95651.known	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	17.0453280953035	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493333	15384798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_95654.nnic	chrX	-	1187	9	NIC	ENSG00000087842.11	novel	1274	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	62.2674423354613	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493330	15384798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15479728_15479822_15491161_15491310_15493189
transcript_95656.nnic	chrX	-	1216	9	NIC	ENSG00000087842.11	novel	1274	10	NA	NA	13	0	combination_of_known_splicesites	TRUE	canonical	1	4	junction_3	64.5425005325948	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493320	15384798	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_15385117_15390184_15390252_15397448_15397532_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_95658.known	chrX	+	6837	8	FSM	ENSG00000169239.13	ENST00000318636.8	6837	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.15581743348207	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTACTATCTTGATT	15737944	True	NA	4	True	AATAAA	-19	NA	15738269	15788411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_15738353_15749970_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484
transcript_95662.nnic	chrX	-	1380	6	NIC	ENSG00000147003.7	novel	1352	6	NA	NA	-92	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	6.28012738724303	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-2	True	AATAAA	-27	NA	15675104	15627317	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15674988
transcript_9567.known	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	110.882320001382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
transcript_95671.known	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.1946708395698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15674885	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
transcript_95679.known	chrX	+	926	4	FSM	ENSG00000186312.10	ENST00000380333.5	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	44.1915024511375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGGCCGCCTGCTGCCC	15673737	True	NA	NA	False	NA	NA	NA	15675714	15703349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_15675779_15688660_15688859_15692962_15693059_15702781
transcript_95680.known	chrX	+	1479	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	24.174573419194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	15788186	True	NA	18	True	AATAAA	-18	NA	15790483	15823260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
transcript_95682.nic	chrX	+	1090	7	ISM	ENSG00000169249.14	ENST00000307771.8	1479	11	-13	13434	0	6030	5prime_fragment	FALSE	canonical	3	110	junction_1	26.8995043324841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTTGGCATGTGTAA	15788173	True	NA	NA	False	AAAAAG	-11	NA	15790470	15809826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199
transcript_95687.nic	chrX	-	1726	3	ISM	ENSG00000182287.15	ENST00000479184.2	1946	6	9276	-173	7000	0	3prime_fragment	FALSE	canonical	3	173	junction_1	85	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	NA	False	NA	-14	True	AATAAA	-14	NA	15845513	15830058	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_15831569_15833443_15833525_15845378
transcript_95691.known	chrX	+	2417	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTATTTATTCTTG	16123245	True	NA	NA	False	TATAAA	-7	NA	16123564	16153518	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16124367_16150304_16150657_16152255
transcript_95692.known	chrX	+	1434	2	FSM	ENSG00000182798.10	ENST00000400004.6	1434	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCCCAAGACGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	16167480	16171464	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16167784_16170333
transcript_95695.known	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_18	24.2207568364078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	16712669	16587998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_95696.nnic	chrX	-	2334	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_18	37.4955141349857	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	16712678	16589548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_95697.nnic	chrX	-	2189	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	41.0423223297881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	16712678	16589548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_95698.known	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	38.1164962181811	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	NA	False	NA	NA	False	NA	NA	NA	16712936	16588305	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_95700.nnic	chrX	-	2324	18	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-61	7907	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	56.1067938697187	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	16712997	16580091	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_16580410_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_95707.known	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_1	32.7175411667809	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	16707692	True	NA	13	True	AATAAA	-27	NA	16719611	16765340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
transcript_9571.known	chr1	+	2487	21	FSM	ENSG00000263528.8	ENST00000584998.5	2487	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	8.7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	206470003	True	NA	NA	False	NA	NA	NA	206470494	206496274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_206470699_206471155_206471246_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
transcript_95711.known	chrX	-	2036	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	238.146770495677	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGTTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	16869886	16844653	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
transcript_95715.known	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_8	14.7932250092006	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	16776619	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
transcript_95723.known	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_8	69.7395390419604	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	NA	False	NA	-4	True	AATAAA	-20	NA	16870362	16844340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
transcript_95724.known	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	248.445514255579	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	88	True	NA	NA	NA	16870361	16844689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
transcript_95725.known	chrX	+	2679	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	5.0438080851674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737191	True	NA	10	True	AATAAA	-20	NA	17737467	17754985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_95727.known	chrX	+	2704	6	FSM	ENSG00000047634.15	ENST00000398080.5	2704	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	6.09918027279076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTCAGATGTGATTTC	17737172	True	NA	13	True	AATAAA	-23	NA	17737448	17754988	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_17737681_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_95729.known	chrX	+	2887	8	FSM	ENSG00000047634.15	ENST00000380041.8	2887	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.95394908975717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737216	True	NA	10	True	AATAAA	-20	NA	17737492	17754985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_17737681_17744070_17744220_17745455_17745540_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_95735.known	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	17.9433632776658	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	18354688	18239312	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_95736.known	chrX	-	2049	8	FSM	ENSG00000180815.15	ENST00000470101.1	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.52656557650139	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATGGTCAGCGCGAA	NA	False	NA	-4	True	AATAAA	-14	NA	19373178	19360059	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652
transcript_95738.known	chrX	+	3484	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	503.779730168777	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_9574.known	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.28372231381357	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	206470150	False	NA	3	True	ATTAAA	-17	NA	206470641	206475135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
transcript_95741.known	chrX	+	3391	11	FSM	ENSG00000131828.14	ENST00000545074.5	3391	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	401.569782229689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351259_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_95744.known	chrX	+	3349	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	81.2561382296747	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	19332149	True	NA	49	True	AAAAAG	-19	NA	19343926	19361718	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_95748.known	chrX	+	3277	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	388.732921104731	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_95755.known	chrX	+	734	5	FSM	ENSG00000131828.14	ENST00000379805.3	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	97.5663235957982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATTATAATGGAGCTG	19332190	True	NA	NA	False	NA	NA	NA	19343967	19353327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081
transcript_95756.known	chrX	+	611	4	FSM	ENSG00000131828.14	ENST00000492364.1	611	4	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	112.431707666872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTAAGTTTCTTTTTT	19332158	True	NA	NA	False	TTTAAA	-42	NA	19343935	19351498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280
transcript_95760.known	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_4	119.757741573005	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20141838	20124524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
transcript_95767.known	chrX	-	765	6	FSM	ENSG00000173674.11	ENST00000379593.1	765	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	386.337986742179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGACCATGTCTACTAA	NA	False	NA	NA	False	NA	NA	NA	20141826	20128077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20141624
transcript_9577.known	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	19.8889775647575	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610250	True	NA	-6	True	AATAAA	-19	NA	206612465	206591641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_95771.known	chrX	-	2682	22	FSM	ENSG00000177189.14	ENST00000646610.1	2682	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	18.0341072677111	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	NA	False	NA	NA	False	NA	NA	NA	20267100	20154931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20267038
transcript_95773.known	chrX	+	4446	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	11.6687617166519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	21837602	True	NA	24	True	AATAAA	-32	NA	21839616	21885423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
transcript_95778.known	chrX	+	4457	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.49346153749394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTGGAAGTGCTTG	21837639	True	NA	NA	False	AATAAA	-16	NA	21839653	21873084	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
transcript_95783.nic	chrX	+	1006	3	ISM	ENSG00000012174.12	ENST00000465888.1	1862	6	-31	11771	-12	-11771	5prime_fragment	FALSE	canonical	3	85	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTCACTGTGATT	21837590	True	NA	NA	False	ATTAAA	-14	NA	21839604	21845822	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_21839810_21843169_21843319_21845170
transcript_95787.known	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	2	1181	junction_6	111.42190089924	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	21915644	True	NA	16	True	ATTAAA	-16	NA	21940708	21994837	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_95795.known	chrX	+	1174	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	481.16484636245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTTTTAATTTAAAAA	21915650	True	NA	NA	False	NA	NA	NA	21940714	21994473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_95805.known	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_6	355.934294810464	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	23641513	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
transcript_95809.known	chrX	+	852	3	FSM	ENSG00000123131.13	ENST00000379331.3	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	2913	junction_2	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTTACACAGTTATATA	23641571	True	NA	NA	False	TTTAAA	-12	NA	23667550	23675462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23667812_23671528_23671647_23674989
transcript_95814.known	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	66.17744390374	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	NA	False	NA	-25	True	AATAAA	-21	NA	23743276	23703670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_95819.nic	chrX	-	1613	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	62.3027538403775	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	NA	False	NA	-31	True	AATAAA	-15	NA	23743318	23703676	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_95827.nic	chrX	-	910	9	ISM	ENSG00000123130.17	ENST00000336430.11	1675	15	-35	4166	-21	-6	5prime_fragment	FALSE	canonical	0	0	junction_7	85.2023327145449	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTACGCTGCAGAAG	NA	False	NA	-8	True	AATAAA	-17	NA	23743311	23707836	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_95828.nic	chrX	-	842	8	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	111.25187455426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	NA	False	NA	-2	True	AATAAA	-23	NA	23743311	23707830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_95831.known	chrX	+	1135	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	286.757010957593	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779090	True	NA	24	True	AATAAA	-17	NA	23783196	23786210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
transcript_95835.known	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_5	28.032837887021	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779066	True	NA	24	True	AATAAA	-17	NA	23783172	23786210	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
transcript_95840.known	chrX	+	868	5	FSM	ENSG00000130066.17	ENST00000379254.5	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	273.20722446524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTCTCGTGAGTCAT	23779066	True	NA	24	True	GATAAA	-37	NA	23783172	23786113	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23785327_23785430_23785519_23785561_23785685
transcript_95843.known	chrX	+	909	3	FSM	ENSG00000130066.17	ENST00000379253.7	909	3	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	24.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTATCACACACTTCAAA	23779066	True	NA	NA	False	AATAAA	-31	NA	23783172	23784411	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23783799
transcript_95848.nic	chrX	-	1047	10	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	109.291658724107	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCGATATCACTGAGT	NA	False	NA	-8	True	ATTAAA	-17	NA	23907963	23833356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23833511_23833606_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_9585.nnic	chr1	-	1898	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_5	50.435851811276	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610287	True	NA	-6	True	AATAAA	-19	NA	206612502	206591641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_95850.known	chrX	-	1122	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_1	59.0566465353393	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907938	23833352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_95852.nic	chrX	-	1038	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_1	62.408808472843	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23907963	23833359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_95859.known	chrX	-	916	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	112.332233184625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAAATCCGAT	NA	False	NA	-18	True	ATTAAA	-7	NA	23907903	23833366	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
transcript_95869.known	chrX	-	714	8	FSM	ENSG00000184831.14	ENST00000439528.5	714	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	66.7162740603055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCGATATCA	NA	False	NA	-14	True	ATTAAA	-11	NA	23880901	23833362	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844
transcript_95872.nnic	chrX	+	2067	12	NNC	ENSG00000130741.11	novel	3457	12	NA	NA	-24	60	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_11	414.963146825282	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCGTCTTTGAGTACCT	24054886	False	NA	28	True	AATAAA	-18	NA	24054921	24077468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073182_24076721
transcript_95874.known	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_6	115.565229693233	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	24038251	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
transcript_9588.known	chr1	-	1633	13	FSM	ENSG00000143486.16	ENST00000367114.7	1633	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	60.2385881308651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610244	True	NA	-6	True	AATAAA	-19	NA	206612459	206591641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_95880.nic	chrX	+	1644	12	NIC	ENSG00000130741.11	novel	3457	12	NA	NA	-3	60	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	430.798163704582	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCGTCTTTGAGTACCT	24038248	True	NA	28	True	AATAAA	-18	NA	24054952	24077468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073412_24077343
transcript_95894.nnic	chrX	+	790	6	NNC	ENSG00000130741.11	novel	3457	12	NA	NA	2	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	630.853200039439	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTCGTCTTTGAGTAC	24038243	True	NA	26	True	AATAAA	-16	NA	24054947	24077466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24077175
transcript_95896.known	chrX	+	773	5	FSM	ENSG00000130741.11	ENST00000423068.1	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1434	junction_3	81.7633781102518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGTGTAAAACTATTT	24038266	True	NA	NA	False	TTTAAA	-29	NA	24054970	24060479	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087
transcript_95898.nnic	chrX	-	463	3	Antisense	novelGene_ENSG00000005889.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGATTTTTTTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	24297422	24200608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrX_-_24200840_24203735_24203877_24297331
transcript_959.nnic	chr1	+	1801	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	33.3894765286481	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471621	True	NA	10	True	AATAAA	-21	NA	10474941	10630758	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_95901.known	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_11	26.0314495108583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	24460115	True	NA	21	True	AATAAA	-18	NA	24465285	24550466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
transcript_95905.known	chrX	+	1741	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	17.9599554565149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATTCCACTTATGT	24460115	True	NA	NA	False	AATAAA	-20	NA	24465285	24534422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
transcript_95907.known	chrX	-	1289	9	FSM	ENSG00000102230.14	ENST00000356768.8	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	37.3042809205592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	NA	False	NA	-14	True	AATAAA	-14	NA	24647158	24561841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24562118_24562442_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_95909.known	chrX	-	5558	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6330251805305	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	24647347	24558086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_95910.known	chrX	-	856	7	FSM	ENSG00000102230.14	ENST00000496020.1	856	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	43.8688069386691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCACCTTCTCATGGCT	NA	False	NA	NA	False	NA	NA	NA	24647038	24562400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_95911.known	chrX	+	5487	37	FSM	ENSG00000101868.13	ENST00000379068.8	5487	37	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_19	24.3304158575736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	24689481	True	NA	17	True	AATAAA	-17	NA	24693917	24996986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_95912.known	chrX	+	2399	15	FSM	ENSG00000101868.13	ENST00000677890.1	2399	15	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	14.0946146902037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATCCCGTTTTCTCTA	24689504	True	NA	NA	False	ATTAAA	-23	NA	24693940	24728628	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781
transcript_95916.known	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	NA	False	NA	NA	NA	24789069	24788391	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24788400_24789100
transcript_95917.known	chrX	+	1949	2	FSM	ENSG00000176746.6	ENST00000379034.1	1949	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACTGCCGTTAGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	26192439	26195646	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_26192528_26193785
transcript_95918.known	chrX	+	1607	2	FSM	ENSG00000099399.6	ENST00000378988.5	1607	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTTATGGCTCTT	30215507	True	NA	NA	False	ATTAAA	-15	NA	30215562	30220089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30215656_30218575
transcript_95919.known	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	14.4446356824947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	30652750	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_95922.known	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_8	18.0568508188954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_95928.known	chrX	-	1296	7	FSM	ENSG00000198947.18	ENST00000681334.1	1296	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.4154623774458	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAGTTATGGGAAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	31266971	31195094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_31195646_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_95931.known	chrX	-	719	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	37.0944739819828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAATTTGTCAGTGTAT	NA	False	NA	-5	True	ACTAAA	-24	NA	37847408	37840542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
transcript_95933.known	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	15.2212844398888	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	NA	False	NA	0	True	AATAAA	-21	NA	37847571	37838835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_95939.known	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.61743318211757	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220871	38149338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_95940.known	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	7.7028133388609	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	NA	False	NA	2	True	AATAAA	-27	NA	38327509	38269162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_9595.known	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.1219603650999	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	207051550	True	NA	NA	False	AATAAA	-16	NA	207053310	207081024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
transcript_95951.known	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	11.0804111026659	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	38560364	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_95953.known	chrX	+	1812	2	FSM	ENSG00000165175.17	ENST00000457894.5	1812	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAAGCGTCTGGTCCT	38798189	True	NA	-61	True	AATAAA	-22	NA	38801439	38806446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38801488_38804682
transcript_95954.known	chrX	+	4814	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCTCTCTGGTAT	38798204	True	NA	30	True	AATAAA	-34	NA	38801454	38806537	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38804414_38804682
transcript_95956.nnic	chrX	+	399	2	FSM	ENSG00000289068.1	ENST00000688474.1	357	2	-42	0	-42	0	multi-exon	FALSE	canonical	2	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGTGGTATTTTGTTA	39653026	True	NA	5	True	AATAAA	-16	NA	39653207	39671314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_39653462_39671169
transcript_95958.nnic	chrX	-	618	2	Genic_Genomic	ENSG00000183337.18	novel	288	2	NA	NA	-55	-66685	multi-exon	FALSE	canonical	3	22	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40146684	40144528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chrX_-_40144907_40146444
transcript_95959.nnic	chrX	-	592	2	NNC	ENSG00000183337.18	novel	288	2	NA	NA	-52	-66685	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40146681	40144528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_40144907_40146467
transcript_9596.known	chr1	-	6396	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	-207051181	False	NA	-2	True	AATAAA	-15	NA	207051208	207043848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_207049724_207050687
transcript_95960.known	chrX	+	2242	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_3	25.6259146178239	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCATACTTTATGT	40570494	True	NA	NA	False	NA	NA	NA	40580969	40606848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_95961.known	chrX	+	1254	9	FSM	ENSG00000182220.15	ENST00000447485.6	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	329.080703437622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATAGATTCCATAATATG	40570560	True	NA	95	True	NA	NA	NA	40581035	40605946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600781_40600882_40605560
transcript_95962.known	chrX	+	1303	9	FSM	ENSG00000182220.15	ENST00000638153.1	1303	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	333.160997117009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAGATTCCATAATAT	40570473	True	NA	94	True	NA	NA	NA	40580948	40605945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599648_40599742_40600761_40600882_40605560
transcript_95965.known	chrX	+	1904	8	FSM	ENSG00000182220.15	ENST00000636287.1	1904	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	447.726775283903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCATTGCAGTACTA	40570522	True	NA	25	True	AATAAA	-19	NA	40580997	40606637	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_95966.known	chrX	+	1877	8	FSM	ENSG00000182220.15	ENST00000636251.1	1877	8	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_7	442.313629610004	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGATGATTCCAAA	40570494	True	NA	5	True	NA	NA	NA	40580969	40606617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_95967.known	chrX	+	1093	7	FSM	ENSG00000182220.15	ENST00000423649.2	1093	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	368.257910830017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAGATTCCATAATAT	40570506	True	NA	94	True	NA	NA	NA	40580981	40605945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_95968.known	chrX	+	1187	7	FSM	ENSG00000182220.15	ENST00000636970.1	1187	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	465.37392373111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAATGAATTTGGAAAT	40570484	True	NA	NA	False	NA	NA	NA	40580959	40606010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_95969.known	chrX	-	7996	31	FSM	ENSG00000180182.11	ENST00000324817.6	7996	31	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_30	73.2540783847562	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTGTCACTTGGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	40735542	40648304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
transcript_9597.known	chr1	+	2590	10	FSM	ENSG00000196352.17	ENST00000367064.9	2590	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.4680584118346	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTTATCACAACTAGC	207320037	True	NA	NA	False	AATAAA	-19	NA	207321677	207360966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207359545
transcript_95970.known	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	40735385	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40735791_40738192
transcript_95972.known	chrX	+	12543	45	FSM	ENSG00000124486.14	ENST00000378308.7	12543	45	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_13	177.297252091434	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGTTTTCCCTTTATTT	41082188	True	NA	NA	False	AATAAA	-16	NA	41085444	41236579	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152947_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229780_41230500_41230597_41232386
transcript_95974.known	chrX	+	4635	17	FSM	ENSG00000215301.11	ENST00000644876.2	4635	17	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_15	60.8439345785593	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAATGTTATTTTTTG	41321339	True	NA	26	True	AATAAA	-19	NA	41334161	41350274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_95977.known	chrX	+	4554	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_15	107.601986505826	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	41321352	False	NA	22	True	AATAAA	-19	NA	41334174	41350209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_9598.known	chr1	+	4139	20	FSM	ENSG00000117322.18	ENST00000367057.8	4139	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	6.72161107188314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGCCTTATTTTGT	207453769	True	NA	NA	False	AATAAA	-23	NA	207454327	207489892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473544_207473722_207473800_207473886_207474240_207474324_207474823_207475217_207476233_207476420_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
transcript_95983.known	chrX	+	1434	3	FSM	ENSG00000215301.11	ENST00000643821.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	330	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATTTGTGGATTTCAA	41333968	False	NA	NA	False	ATTAAA	-22	NA	41334011	41338780	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41334298_41337407_41337466_41337690
transcript_95984.known	chrX	+	4467	16	FSM	ENSG00000215301.11	ENST00000643963.1	4467	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	190.454007279681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAAGTGCTCTTGCC	41321341	True	NA	-1	True	NA	NA	NA	41334163	41350247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_95987.known	chrX	-	564	5	FSM	ENSG00000147044.23	ENST00000644770.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	101.554172735541	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTGTTTTTGTACTG	NA	False	NA	2	True	AATAAA	-19	NA	41923012	41743552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_41743737_41745523_41745602_41787177_41787284_41853114_41853228_41922929
transcript_95989.known	chrX	+	3931	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	5.71473212541989	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCGACTCCTGTAT	43655912	True	NA	19	True	AATAAA	-19	NA	43656298	43746817	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_9599.known	chr1	+	3877	18	FSM	ENSG00000117322.18	ENST00000367059.3	3877	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	6.32947736681507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTTATTTTGTTTT	207453671	True	NA	NA	False	AATAAA	-26	NA	207454229	207489895	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473800_207473886_207474240_207474324_207474823_207475217_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
transcript_95991.known	chrX	-	2570	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.81848852242127	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTCCTTTCTTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	43882450	43766609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
transcript_95992.known	chrX	-	1719	3	FSM	ENSG00000124479.11	ENST00000642620.1	1719	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTGTTTAAGTATTT	NA	False	NA	-2	True	AATAAA	-17	NA	43973390	43948775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_43950027_43958471_43958853_43973303
transcript_95993.known	chrX	-	3257	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	0	0	0	0	multi-exon	TRUE	non_canonical	1	11	junction_9	4.23782770691181	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTAAGAAGTCTATC	NA	False	NA	NA	False	ATTAAA	-26	NA	44343672	44147871	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
transcript_95997.known	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	31.855140872393	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	NA	False	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
transcript_96007.known	chrX	-	1458	3	FSM	ENSG00000231566.3	ENST00000456532.2	1458	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACACTTACCAGTAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	45851541	45847041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_45848214_45849374_45849473_45851353
transcript_96012.nnic	chrX	+	1332	7	NIC	ENSG00000147121.16	novel	993	7	NA	NA	-50	-56	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	30.4229445576124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCTCATTGTATGTCA	46446488	True	NA	28	True	AATAAA	-25	NA	46447241	46473538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472749
transcript_96013.known	chrX	+	1354	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	19.4586741583285	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGCTC	46446538	True	NA	NA	False	NA	NA	NA	46447291	46473669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
transcript_96016.known	chrX	+	730	6	FSM	ENSG00000147121.16	ENST00000478600.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	27.1189970316013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCACAATCATAGTGGAAG	46446543	True	NA	NA	False	AAAACA	-42	NA	46447296	46497422	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46497121
transcript_96017.known	chrX	+	2334	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	24.0283166285115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	46446543	True	NA	16	True	AATAAA	-16	NA	46447296	46474639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
transcript_96022.known	chrX	+	993	7	FSM	ENSG00000147121.16	ENST00000377919.6	993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	31.1202863454407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCTGCATATTAAATT	46446540	True	NA	NA	False	AATAAA	-18	NA	46447293	46472526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472024
transcript_96026.known	chrX	+	2078	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTGTGAAAATACTT	46544793	True	NA	NA	False	AATATA	-20	NA	46545492	46548408	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46545628_46546465
transcript_96027.nnic	chrX	+	651	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	7	-307	multi-exon	FALSE	canonical	3	22	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGGGCAGTATTGTT	46544800	True	NA	13	True	ATTAAA	-28	NA	46545499	46598189	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_96028.nnic	chrX	+	868	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	7	-90	multi-exon	FALSE	canonical	3	22	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTGTTTGGATGC	46544800	True	NA	27	True	ATTAAA	-27	NA	46545499	46598406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_96029.known	chrX	+	2396	2	FSM	ENSG00000147119.4	ENST00000276055.4	2396	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGTTTAAGAATTT	46572238	True	NA	117	True	AAGAAA	-4	NA	46573764	46598496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46575424_46597759
transcript_96032.known	chrX	+	3700	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15.945218719102	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	46835427	True	NA	99	True	AATAAA	-18	NA	46837042	46882358	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
transcript_96033.known	chrX	+	1611	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.5374989832438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	47078252	True	NA	26	True	AATAAA	-20	NA	47078379	47093313	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_96034.nic	chrX	+	1437	6	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	7.863841300535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTATGTTCCTTTTTA	47078207	True	NA	23	True	AATAAA	-17	NA	47078334	47093310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
transcript_96035.nic	chrX	+	1333	5	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_3	9.02773504263389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTATGTTCCTTTTTA	NA	False	NA	23	True	AATAAA	-17	NA	47078306	47093310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47092060_47092216_47092896
transcript_96036.known	chrX	-	948	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	149	-328	-4	multi-exon	FALSE	canonical	3	708	junction_1	626	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGCTAGTGTTGATT	NA	False	NA	-10	True	ATTAAA	-13	NA	47145038	47142219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47142441_47142583_47142745_47144472
transcript_96037.known	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1468	junction_1	246	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47142441_47142613_47142745_47144472
transcript_9604.known	chr1	+	663	4	FSM	ENSG00000197721.17	ENST00000531844.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.8878405775519	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCTGTGCAATCTGTA	207643643	True	NA	6	True	AATAAA	-14	NA	207645112	207684036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207645331_207677388_207677569_207678197_207678298_207683871
transcript_96042.known	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_10	60.392071238127	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136000	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_96045.known	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_1	269.732774426839	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47187734	True	NA	14	True	AATAAA	-17	NA	47190860	47215128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_96048.known	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	238.456959638422	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47180108	True	NA	14	True	AATAAA	-17	NA	47193828	47215128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_9605.known	chr1	+	3371	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	325.560381696203	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_96050.nnic	chrX	+	1208	8	NNC	ENSG00000130985.17	novel	3572	26	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	564.127862189025	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47180075	True	NA	14	True	AATAAA	-17	NA	47193795	47215128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199313_47213020_47213182_47214326_47214429_47214536_47214638_47214793
transcript_96053.known	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	204.708855586551	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47217376	True	NA	15	True	ATTAAA	-17	NA	47218232	47229997	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_96056.known	chrX	+	3196	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_4	54.7231897827603	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	47230777	True	NA	19	True	TATAAA	-19	NA	47233008	47248328	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_96058.nic	chrX	+	2731	21	NIC	ENSG00000102226.10	novel	804	7	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	129.312644393346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCCT	47232919	True	NA	-12	True	NA	NA	NA	47233411	47247952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47233534_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_96067.known	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	2	193	junction_12	41.4549822766282	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	47556737	True	NA	28	True	NA	NA	NA	47561204	47571908	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
transcript_9607.known	chr1	+	3278	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	278.463180789769	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_96073.known	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.91547594742265	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	NA	False	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
transcript_96075.known	chrX	+	1271	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	30.6659420204239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	47556754	True	NA	NA	False	AATAAA	-20	NA	47561221	47565975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
transcript_96079.known	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	26.2800304413827	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578770	True	NA	12	True	AATAAA	-17	NA	47582435	47586789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_96082.known	chrX	+	626	5	FSM	ENSG00000102265.12	ENST00000377017.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	195.11198707409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578784	False	NA	12	True	AATAAA	-17	NA	47582449	47586789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47582475_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_96083.known	chrX	-	2876	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	59.3784940492394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650563	47635520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
transcript_96084.known	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	21.4326853193901	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650488	47635520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
transcript_96088.known	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_6	77.8388648997973	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_96089.known	chrX	-	773	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_5	37.4838631947135	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACATGGCCCTTCTTTTT	NA	False	NA	-4	True	ATTAAA	-19	NA	47659180	47651795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
transcript_9609.known	chr1	+	3320	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	272.761138890585	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	207738347	True	NA	14	True	AATAAA	-15	NA	207752053	207795504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_96090.known	chrX	-	627	5	FSM	ENSG00000126756.12	ENST00000485641.5	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	241.61384480199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	47659107	47651800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657781_47657864_47658829
transcript_96091.nic	chrX	+	607	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47836082	True	NA	16	True	AATAAA	-16	NA	47836923	47861045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47836988_47846104_47846322_47860719
transcript_96092.nnic	chrX	+	617	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47836092	True	NA	16	True	AATAAA	-16	NA	47836933	47861045	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47837008_47846104_47846322_47860719
transcript_96093.known	chrX	-	3586	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	14.8483070490283	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTTACTGTTATAG	NA	False	NA	-10	True	AATAAA	-15	NA	48003978	47974851	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
transcript_96097.known	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	14.3721953785773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003989	47974850	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
transcript_96098.known	chrX	-	2455	5	FSM	ENSG00000221994.12	ENST00000409324.7	2455	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.76085931090146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	NA	False	NA	1	True	AATAAA	-24	NA	48071116	48058213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071064
transcript_96099.known	chrX	-	3475	5	FSM	ENSG00000221994.12	ENST00000276054.9	3475	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTGCAGTTCATGCA	NA	False	NA	NA	False	AATAAA	-33	NA	48071640	48057515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071266
transcript_96102.known	chrX	+	1268	2	FSM	ENSG00000287757.2	ENST00000668079.1	1268	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTACTCTGTCCCT	48071195	True	NA	NA	False	TTTAAA	-7	NA	48071225	48078721	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48071527_48077754
transcript_96103.known	chrX	+	1223	8	FSM	ENSG00000126752.8	ENST00000376919.4	1223	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGTTCCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	48255391	48267444	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48255433_48257221_48257311_48257745_48257861_48258535_48258632_48261765_48261816_48263781_48263918_48266286_48266392_48266853
transcript_9611.nic	chr1	+	1848	13	NIC	ENSG00000117335.20	novel	3320	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	242.617139520045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	207738330	True	NA	14	True	AATAAA	-15	NA	207752036	207795504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518_207793609_207795004
transcript_96111.nic	chrX	-	1929	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	57.7066913123792	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48468424	48458543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
transcript_96113.nic	chrX	-	2025	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_15	56.5773413616755	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48469100	48458543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
transcript_96114.known	chrX	-	2659	16	FSM	ENSG00000017483.16	ENST00000595796.5	2659	16	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_15	28.3548937575157	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTTCTGATCTTTCT	NA	False	NA	-5	True	AATAAA	-23	NA	48470177	48458536	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
transcript_96119.nnic	chrX	-	1826	15	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	113	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	64.7421888756332	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48469444	48458543	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
transcript_96134.known	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	104.786568089956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473687	True	NA	16	True	ATTAAA	-20	NA	48476160	48486299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_96135.known	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	41.1713054066651	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	48473725	True	NA	14	True	AATATA	-26	NA	48476198	48486350	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
transcript_96138.nic	chrX	+	1865	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	54.0509019351204	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473702	True	NA	16	True	ATTAAA	-20	NA	48476175	48486299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_96146.nic	chrX	+	2055	12	NIC	ENSG00000068438.15	novel	1899	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	159	junction_9	40.8575432812009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473709	True	NA	16	True	ATTAAA	-20	NA	48476182	48486299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
transcript_96148.nic	chrX	+	2094	12	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	104	junction_9	55.171408333671	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48476108	False	NA	16	True	ATTAAA	-20	NA	48476137	48486299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48483028_48485735
transcript_96152.nic	chrX	+	1404	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	-2	3396	-2	0	5prime_fragment	FALSE	canonical	3	159	junction_9	41.1107042021905	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48473723	True	NA	31	True	TATAAA	-45	NA	48476196	48482954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
transcript_96153.nic	chrX	+	1419	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	56.9160785718763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48473702	True	NA	31	True	TATAAA	-45	NA	48476175	48482954	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_96167.known	chrX	+	1848	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	40.8987782112326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	48507836	True	NA	22	True	AATAAA	-23	NA	48509001	48520814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96168.known	chrX	+	1877	14	FSM	ENSG00000102312.24	ENST00000359882.8	1877	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	46.0615744308991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	48507796	True	NA	14	True	AATAAA	-15	NA	48508961	48520806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_9617.known	chr1	+	3233	12	FSM	ENSG00000117335.20	ENST00000354848.5	3233	12	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_6	171.944926797041	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_96170.nic	chrX	+	2194	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_2	25.7115408587921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507826	True	NA	16	True	AATAAA	-17	NA	48508991	48520808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96172.nic	chrX	+	1763	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	30.9448434045696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507826	True	NA	16	True	AATAAA	-17	NA	48508991	48520808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_9618.known	chr1	+	3281	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	307.388950585653	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_96181.known	chrX	+	3785	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	7.8587530817554	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	48538537	True	NA	13	True	AGTAAA	-15	NA	48539713	48562609	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
transcript_96182.known	chrX	+	904	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	349.160690084093	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	48514397	True	NA	9	True	AATAAA	-10	NA	48521798	48528710	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96184.known	chrX	+	1125	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	242.846659437597	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48514406	True	NA	15	True	AATAAA	-16	NA	48521807	48528716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96185.known	chrX	+	796	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	343.124157558164	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGAAGAACTGAGG	48514403	True	NA	NA	False	NA	NA	NA	48521804	48528439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96187.nnic	chrX	+	844	5	NNC	ENSG00000147155.11	novel	1125	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	344.848789326568	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48514403	True	NA	15	True	AATAAA	-16	NA	48521804	48528716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_48521908_48523982_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96190.nic	chrX	+	1236	5	ISM	ENSG00000147155.11	ENST00000446158.5	714	6	186	-471	173	0	3prime_fragment	FALSE	canonical	2	10	junction_1	369.863741802302	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48522007	False	NA	15	True	AATAAA	-16	NA	48522041	48528716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48522253_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96192.known	chrX	+	1375	8	FSM	ENSG00000102317.18	ENST00000466764.5	1375	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	265.222509587397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	48564398	True	NA	NA	False	NA	NA	NA	48574490	48577977	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48575814_48576084_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_96194.known	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	502	junction_1	48.1332063710237	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	48564391	True	NA	12	True	AATAAA	-22	NA	48574483	48581162	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_96196.known	chrX	+	724	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	218.084020505859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	48564431	True	NA	NA	False	NA	NA	NA	48574523	48577735	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_96197.known	chrX	+	5457	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	25.0338043058719	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTCGGTTAACTTG	48596158	True	NA	23	True	AATAAA	-38	NA	48597491	48608869	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96199.nic	chrX	+	1673	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	44.1095717615537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	48596157	True	NA	10	True	AATAAA	-20	NA	48597490	48605118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96201.nnic	chrX	+	1742	10	NNC	ENSG00000101940.18	novel	5457	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9909970980926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	48596162	True	NA	10	True	AATAAA	-20	NA	48597495	48605118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_48597655_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96202.nnic	chrX	+	1817	10	NNC	ENSG00000101940.18	novel	5457	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9909970980926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596162	True	NA	25	True	NA	NA	NA	48597495	48605193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_48597655_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96207.known	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	16.4620776331543	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596158	True	NA	25	True	NA	NA	NA	48597491	48605193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96210.known	chrX	+	1829	12	FSM	ENSG00000015285.11	ENST00000376701.5	1829	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1.23983469972599	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTCTGTTTACATTCC	48683785	True	NA	NA	False	AATAAA	-28	NA	48683798	48691427	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48683986_48684282_48684424_48685546_48685634_48685733_48685837_48685945_48685988_48686080_48686135_48686780_48686956_48688053_48688097_48688299_48688454_48688659_48689067_48689319_48689435_48691106
transcript_96211.known	chrX	+	2736	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	15.357083056362	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGTGAGGTGCTTGT	48695986	True	NA	NA	False	AATAAA	-22	NA	48696733	48709016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
transcript_96212.known	chrX	+	4118	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	28.4906671077547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800506	True	NA	28	True	AATAAA	-19	NA	48802066	48824976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_96214.nic	chrX	+	1021	8	ISM	ENSG00000094631.21	ENST00000334136.11	4118	29	-30	18017	3	0	5prime_fragment	FALSE	canonical	3	63	junction_1	24.2057507081879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	48800476	True	NA	2	True	AATAAA	-16	NA	48802036	48806959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_96219.known	chrX	+	591	6	FSM	ENSG00000094631.21	ENST00000441703.6	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	49.0974541091491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCATGGTCTCT	48800625	True	NA	NA	False	NA	NA	NA	48802185	48805745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_96221.known	chrX	+	1999	6	FSM	ENSG00000094631.21	ENST00000462730.5	1999	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	48.3056932462417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATTTCATTGATTCTAA	48801996	False	NA	-11	True	AATAAA	-3	NA	48802015	48806946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_9623.known	chr1	+	3188	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	222.804420961524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_96230.nic	chrX	+	855	7	NIC	ENSG00000102103.18	novel	938	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	129.778550701656	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889742	True	NA	25	True	AATAAA	-26	NA	48897901	48903143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_96231.known	chrX	+	938	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	54.8171201967658	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889792	True	NA	25	True	AATAAA	-26	NA	48897951	48903143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_96235.known	chrX	+	1056	7	ISM	ENSG00000102103.18	ENST00000651767.1	1951	8	7715	-37	0	0	3prime_fragment	FALSE	canonical	3	30	junction_1	130.610957512079	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889752	True	NA	24	True	AATAAA	-25	NA	48897911	48903142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48898094_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_96237.known	chrX	+	965	7	FSM	ENSG00000102103.18	ENST00000396763.6	962	7	-4	1	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	139.845152460379	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48898147	True	NA	24	True	AATAAA	-25	NA	48898255	48903142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898347_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_96238.known	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	446.540653866538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	NA	False	NA	-6	True	TTTAAA	-14	NA	48897790	48893452	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
transcript_96240.known	chrX	-	964	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	427.19342483496	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897762	48893446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
transcript_96245.known	chrX	+	664	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	137.350063705846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889780	True	NA	24	True	AATAAA	-25	NA	48897939	48903142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_9625.nic	chr1	+	3829	11	NIC	ENSG00000117335.20	novel	3371	14	NA	NA	-17	0	intron_retention	FALSE	canonical	3	384	junction_10	148.428467619928	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGATGATGTGTTT	207738330	True	NA	16	True	AATAAA	-17	NA	207752036	207795506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_96252.known	chrX	-	950	7	FSM	ENSG00000126768.12	ENST00000376582.7	950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	372.717348968655	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48898143	48893446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723_48897822_48898066
transcript_96257.nnic	chrX	-	750	5	NIC	ENSG00000126768.12	novel	950	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	430.419853166649	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	NA	False	NA	-2	True	TTTAAA	-18	NA	48897800	48893448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
transcript_96263.known	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	151.58548743201	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889752	True	NA	24	True	AATAAA	-25	NA	48897911	48903142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_96264.known	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	142.442581024386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	48889836	True	NA	-20	True	NA	NA	NA	48897995	48903098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_96267.known	chrX	-	865	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	79.913625246262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	48911646	48903183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_96268.known	chrX	-	1456	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	68.3643730315725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	NA	False	NA	-8	True	AATAAA	-19	NA	48911646	48903182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
transcript_96270.known	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	72.9566081082904	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	NA	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
transcript_96271.known	chrX	-	3047	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	29.6348143611905	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	48911958	48903183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
transcript_96273.known	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	TRUE	canonical	3	1261	junction_3	92.5289143997702	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	NA	False	NA	-15	True	AATAAA	-17	NA	48919024	48913181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
transcript_96275.known	chrX	-	3031	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_16	31.7730955369476	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002264	48973722	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_96278.known	chrX	-	3279	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	44.9265518566515	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043410	49028725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
transcript_96279.known	chrX	-	3291	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_8	26.3016687261052	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043357	49028725	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
transcript_96281.known	chrX	-	1381	11	FSM	ENSG00000196998.19	ENST00000376368.7	1381	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	42.5517332196939	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGTGCCCACTTTC	NA	False	NA	-66	True	NA	NA	NA	49079929	49074703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_96282.known	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	44.3225676151552	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079898	49074639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_96283.known	chrX	-	1545	11	FSM	ENSG00000196998.19	ENST00000634838.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.8001116070038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTTACGGCTTGACCT	NA	False	NA	-21	True	AATAAA	-11	NA	49079881	49074446	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075424_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_96291.known	chrX	-	1301	10	FSM	ENSG00000196998.19	ENST00000485908.6	1301	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	27.5560035805872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCACTTCCCCCCAGC	NA	False	NA	-20	True	GGGGCT	-40	NA	49079911	49074657	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
transcript_96296.known	chrX	-	1146	10	FSM	ENSG00000196998.19	ENST00000396681.9	1146	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	47.5895517114709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCTAGGGACCTGCAG	NA	False	NA	NA	False	NA	NA	NA	49079902	49074791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075454_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
transcript_96297.nic	chrX	-	1244	10	NIC	ENSG00000196998.19	novel	1301	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	43.7453348482744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079926	49074639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
transcript_96302.known	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	13	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	NA	False	NA	-4	True	AATAAA	-24	NA	49074002	49071160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49072009_49072432_49072651_49073808
transcript_96304.known	chrX	-	1658	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	6.64906008395172	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAGAAAGATGAAATC	NA	False	NA	-22	True	AATAAA	-15	NA	49123735	49113406	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
transcript_96309.known	chrX	-	2795	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	6.59545297913646	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGAGTTGGTCT	NA	False	NA	-11	True	AATAAA	-18	NA	49186373	49174801	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
transcript_96310.known	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.63068014212911	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	49170484	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_96311.known	chrX	-	2421	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.7169905660283	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCCGGCTCTGATTTC	NA	False	NA	-11	True	AATAAA	-16	NA	49200193	49187814	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_96312.known	chrX	-	574	3	FSM	ENSG00000102003.12	ENST00000472737.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATTCTATACACATTT	NA	False	NA	NA	False	NA	NA	NA	49200195	49197376	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49197840_49198967_49199034_49200150
transcript_96313.known	chrX	-	1850	6	FSM	ENSG00000102003.12	ENST00000479808.5	1850	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.06939798987516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49200199	49190541	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_96317.known	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_5	9.11643433585741	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	49234753	True	NA	17	True	AATAAA	-18	NA	49235469	49250520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
transcript_96320.known	chrX	+	487	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.26468052730799	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCTTTTGTAAAATT	49829154	True	NA	11	True	AATAAA	-26	NA	49829259	49833973	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_96322.known	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	51330426	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51333460_51336238
transcript_96323.known	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	NA	False	NA	-13	True	AATAAA	-15	NA	51496592	51490010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_51491750_51495950
transcript_96324.known	chrX	-	1893	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	NA	False	NA	4	True	AATAAA	-31	NA	51618912	51617019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_51617000_51618900
transcript_96325.known	chrX	-	1620	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51682831	51681211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_51681200_51682800
transcript_96326.known	chrX	+	1620	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51710511	51712131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51710500_51712100
transcript_96327.known	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	51742223	True	NA	20	True	AATAAA	-36	NA	51743441	51746232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51743400_51746200
transcript_96328.known	chrX	+	2701	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	237.329397790403	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51801229	True	NA	13	True	AATAAA	-21	NA	51803006	51902354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_96329.known	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	121.828060761423	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51884992	True	NA	13	True	AATAAA	-21	NA	51893622	51902354	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_9633.nic	chr1	+	685	5	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-86	32364	-17	1558	5prime_fragment	FALSE	canonical	3	620	junction_4	55.5444641706084	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACACACCTTTAGTG	207738330	True	NA	NA	False	AATAAA	-4	NA	207752036	207761282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248
transcript_96335.known	chrX	-	2482	13	FSM	ENSG00000187243.17	ENST00000497164.5	2482	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_12	258.090531058817	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068174_52069129
transcript_96336.known	chrX	-	2578	13	FSM	ENSG00000187243.17	ENST00000335504.10	2513	13	-65	0	-29	0	multi-exon	FALSE	canonical	3	671	junction_12	171.506478659619	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069248	52061826	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
transcript_96344.known	chrX	+	2483	13	FSM	ENSG00000154545.17	ENST00000498483.5	2483	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	263.602749838127	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_96345.known	chrX	+	2537	13	FSM	ENSG00000154545.17	ENST00000471932.6	2537	13	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	177.320390348469	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_96347.known	chrX	+	2942	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	20.8326666559997	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52897399	52908556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
transcript_96348.known	chrX	-	2942	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	22.1058061754523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52958414	52947257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
transcript_96349.known	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	53.1099488482776	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
transcript_9635.nic	chr1	+	2657	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-86	31916	-17	2006	intron_retention	FALSE	canonical	3	656	junction_1	46.5068692656138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACACTGGCTTAAAGAAA	207738330	True	NA	NA	False	NA	NA	NA	207752036	207761730	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_96350.known	chrX	-	3791	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52955153_52955247_52956272
transcript_96352.known	chrX	-	2032	3	FSM	ENSG00000268350.8	ENST00000617970.4	2032	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958501	52947253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52956272_52956756_52958404
transcript_96353.known	chrX	-	1869	4	FSM	ENSG00000268350.8	ENST00000619373.5	1869	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	58.7593964116946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958873	52947253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958623
transcript_96357.known	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53281584	53266327	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53267065_53279563_53279660_53281495
transcript_9636.known	chr1	+	408	4	FSM	ENSG00000117335.20	ENST00000493796.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	337.994411525135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	207738361	True	NA	NA	False	NA	NA	NA	207752067	207759724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752098_207757013_207757203_207757539_207757643_207759638
transcript_96363.known	chrX	-	901	6	FSM	ENSG00000072506.14	ENST00000495986.2	901	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	376.552785144394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGAGAAGGCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	53434348	53431405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434177
transcript_96364.known	chrX	-	916	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	277.55821011096	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	NA	False	NA	-3	True	AATAAA	-20	NA	53434356	53431257	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96367.known	chrX	-	954	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	73.6977611600244	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	53434370	53431260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96369.known	chrX	-	1154	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_4	82.3771813064759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	53434367	53431260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96370.known	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	325.657795853255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	53434350	53431262	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96371.known	chrX	-	14796	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_67	197.101869816266	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	NA	False	NA	2	True	AATAAA	-27	NA	53684169	53532095	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
transcript_96373.nnic	chrX	-	999	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-89	88	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTTCTGTGTGATTC	NA	False	NA	-6	True	AATAAA	-17	NA	54358094	54333089	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_54333793_54357798
transcript_96374.nnic	chrX	-	789	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-89	-122	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAAATGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	54358094	54333299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_54333793_54357798
transcript_96377.known	chrX	+	4076	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_1	30.7652401258303	515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	54426539	True	NA	NA	False	AATAAA	-25	NA	54440403	54448032	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
transcript_9638.known	chr1	+	7826	9	FSM	ENSG00000117335.20	ENST00000469535.5	7826	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_8	153.20411221635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738361	True	NA	23	True	AATAAA	-24	NA	207752067	207795513	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207761447_207767012_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_96387.known	chrX	+	2638	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	14.4826134986058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	54522072	True	NA	-33	True	NA	NA	NA	54530182	54621521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_9639.known	chr1	+	473	6	FSM	ENSG00000117335.20	ENST00000462968.2	473	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	340.330662738461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGCTTCACATTTGAT	207770327	False	NA	18	True	AATAAA	-26	NA	207770338	207795224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518_207793609_207795004
transcript_96391.known	chrX	+	2357	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	8.38941131559433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	54522100	True	NA	NA	False	NA	NA	NA	54530210	54561071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_96394.known	chrX	+	8684	16	FSM	ENSG00000130119.17	ENST00000360845.3	8684	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.397132284883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTCTGCATTTTTT	54522108	True	NA	NA	False	AATAAA	-26	NA	54530218	54567289	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_964.nnic	chr1	+	314	3	NNC	ENSG00000142655.13	novel	637	6	NA	NA	-8	-16282	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	51	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGTTTTGGTAGTGAC	10471621	True	NA	NA	False	AATAAA	-16	NA	10474941	10520007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_10475003_10495273_10495322_10519802
transcript_96403.nnic	chrX	+	555	5	NNC	ENSG00000130119.17	novel	2575	9	NA	NA	8	-2013	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	27.6676706645138	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	54522080	True	NA	6	True	AGTAAA	-16	NA	54530190	54565276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540171_54564997
transcript_96404.nnic	chrX	+	627	5	NNC	ENSG00000130119.17	novel	895	9	NA	NA	-2	-2013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.3345924647093	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	54522125	True	NA	6	True	AGTAAA	-16	NA	54530235	54565276	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540171_54564997
transcript_96420.known	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	213.158196339401	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54800603	True	NA	25	True	ATTAAA	-19	NA	54807744	54816015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_96425.known	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	258.923559612142	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	54803409	True	NA	17	True	ATTAAA	-11	NA	54808370	54816007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_96428.nic	chrX	+	2154	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	130	junction_1	372.76112212336	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54806997	True	NA	25	True	ATTAAA	-19	NA	54809062	54816015	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_96429.known	chrX	+	2066	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	0	0	0	0	multi-exon	TRUE	canonical	3	757	junction_1	221.898867590658	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	NA	False	NA	29	True	NA	NA	NA	54807598	54815694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_96436.known	chrX	+	1958	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	270.114484451952	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	54801196	False	NA	29	True	NA	NA	NA	54808337	54815694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_96443.known	chrX	+	2026	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	389.332783783906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	54806994	True	NA	29	True	NA	NA	NA	54809059	54815694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_9645.nic	chr1	+	982	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	81	junction_3	28.7402157263998	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418097	True	NA	20	True	ACTAAA	-21	NA	209428815	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
transcript_96454.known	chrX	+	2597	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	83.5108326601863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_96456.known	chrX	+	1403	14	NNC	ENSG00000067445.22	novel	1404	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	126.513231059586	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916853	True	NA	NA	False	ATTAAA	-12	NA	54920815	54931429	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928669_54928669_54928711_54930740_54931032_54931203
transcript_96457.known	chrX	+	2326	13	FSM	ENSG00000067445.22	ENST00000319167.12	2326	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	102.582047108102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916848	True	NA	NA	False	ATTAAA	-14	NA	54920810	54931431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_96459.known	chrX	+	2306	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	86.8144573213471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_9646.known	chr1	+	798	5	FSM	ENSG00000230937.13	ENST00000657184.2	809	5	1	10	0	-10	multi-exon	FALSE	canonical	3	28	junction_4	50.4894791020862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	209418101	True	NA	10	True	AATAAA	-21	NA	209428819	209432838	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432672
transcript_96464.known	chrX	+	1115	12	FSM	ENSG00000067445.22	ENST00000399736.5	1115	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	116.444148283293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_96468.known	chrX	+	3239	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	9.26066952223218	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	54997884	True	NA	3	True	AATAAA	-14	NA	55000362	55009057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
transcript_9647.known	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	35.688758734369	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	209418098	True	NA	22	True	ACTAAA	-23	NA	209428816	209432551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_96470.known	chrX	+	728	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	73.3974624901979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGCCTGAGGTGAT	54997914	True	NA	NA	False	NA	NA	NA	55000392	55006757	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
transcript_96476.known	chrX	-	1179	4	FSM	ENSG00000182518.14	ENST00000358460.8	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	88.4646822183859	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-4	True	AATAAA	-22	NA	55161310	55143101	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55143876_55146180_55146312_55159128_55159229_55161136
transcript_96480.known	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	93	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	NA	False	NA	NA	False	NA	NA	NA	55161119	55145386	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55146312_55159128_55159229_55160974
transcript_96481.known	chrX	-	1109	3	FSM	ENSG00000182518.14	ENST00000472571.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	87.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGCACAATTCTGTC	NA	False	NA	NA	False	NA	NA	NA	55161182	55145355	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55146312_55159121_55159229_55161136
transcript_96482.known	chrX	-	712	3	FSM	ENSG00000182518.14	ENST00000489298.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	106	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	NA	False	NA	-52	True	NA	NA	NA	55161102	55145937	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55146312_55159128_55159229_55160864
transcript_96483.known	chrX	+	1440	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	55451181	True	NA	16	True	AATAAA	-17	NA	55452126	55453566	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55452100_55453600
transcript_96486.known	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	19.6471371960395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	55716999	False	NA	NA	False	NA	NA	NA	55717884	55758348	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_96491.known	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	11.8883696667513	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716863	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_96495.nic	chrX	+	1245	5	ISM	ENSG00000083750.13	ENST00000374941.9	2051	10	-28	27066	-28	0	5prime_fragment	FALSE	canonical	3	46	junction_3	4.94974746830583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	55716835	True	NA	NA	False	AATAAA	-24	NA	55717720	55731708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363
transcript_96496.nic	chrX	+	2089	2	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-164	37645	-28	-11005	5prime_fragment	FALSE	canonical	3	57	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCGGACATGATGGTGCA	55716835	True	NA	NA	False	AATATA	-19	NA	55717720	55720703	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_55718420_55719313
transcript_96499.known	chrX	+	956	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	55907990	True	NA	NA	False	NA	NA	NA	55908242	56205253	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908801_56014844_56014962_56204972
transcript_9650.known	chr1	+	908	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	18	0	1	0	multi-exon	FALSE	canonical	3	42	junction_2	45.536310297998	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418119	True	NA	20	True	ACTAAA	-21	NA	209428837	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
transcript_96501.known	chrX	+	4651	3	FSM	ENSG00000227486.3	ENST00000655874.1	4651	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGCTCTTTTTTTGGT	55908253	True	NA	NA	False	AATATA	-4	NA	55908282	56209271	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908518_56014844_56014962_56204972
transcript_96502.nnic	chrX	+	2284	7	NNC	ENSG00000102349.18	novel	1908	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.7515430335097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	56231940	True	NA	7	True	AATAAA	-23	NA	56232381	56285097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_56232806_56233157_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_96503.nnic	chrX	+	1965	7	NNC	ENSG00000102349.18	novel	1908	7	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6.42045342808607	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	56231942	True	NA	7	True	AATAAA	-23	NA	56232383	56285097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_56232489_56233157_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_96504.known	chrX	+	9096	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	3.31058907144937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	56231914	True	NA	9	True	AATAAA	-21	NA	56232355	56291531	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_96507.known	chrX	-	2998	6	FSM	ENSG00000204271.13	ENST00000639956.1	2998	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	20.9284495364563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995533	56975141	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_96508.known	chrX	-	856	6	FSM	ENSG00000204271.13	ENST00000638834.1	856	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.247696509976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATAGTCTCTGGTAA	NA	False	NA	NA	False	NA	NA	NA	56995381	56977088	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_9651.known	chr1	+	1072	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	25.4209012865835	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418099	True	NA	20	True	ACTAAA	-21	NA	209428817	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
transcript_96511.known	chrX	-	2938	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	5.62916512459885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	-2	True	AATAAA	-15	NA	56995555	56975119	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_96512.known	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	7.36121593216773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	NA	False	NA	-2	True	AATAAA	-20	NA	56995525	56976381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_96513.known	chrX	-	2543	5	FSM	ENSG00000204271.13	ENST00000640187.1	2543	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	14.5494845269515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGACATCGCATTTT	NA	False	NA	NA	False	NA	NA	NA	56995507	56975401	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_96516.known	chrX	-	3719	4	FSM	ENSG00000204271.13	ENST00000639482.1	3719	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTAAACCCAAAATAAAAT	NA	False	NA	NA	False	CATAAA	-12	NA	56995530	56975670	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995241
transcript_96518.known	chrX	+	2344	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	88	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	56723829	True	NA	NA	False	AATAAA	-1	NA	56729242	56819179	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56729590_56732062_56732200_56817319
transcript_96519.known	chrX	+	543	2	FSM	ENSG00000204272.13	ENST00000423617.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAGAACTCCTATG	56723940	False	NA	10	True	AGTAAA	-20	NA	56729353	56817626	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56729590_56817319
transcript_96523.known	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121315	57119681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57120102_57120404_57120632_57121237
transcript_96524.nic	chrX	-	916	3	NIC	ENSG00000186787.10	novel	1152	2	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121558	57119681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_57120102_57120404_57120635_57121292
transcript_96525.nic	chrX	-	1574	2	ISM	ENSG00000186787.10	ENST00000374910.3	725	3	-243	0	-10	0	intron_retention	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121558	57119681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_57120102_57120404
transcript_96526.nnic	chrX	-	1428	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	-10	0	intron_retention	FALSE	canonical	3	25	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121558	57119681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_57120632_57121080
transcript_96527.known	chrX	-	1258	2	FSM	ENSG00000186787.10	ENST00000333933.3	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	NA	False	NA	-3	True	AATACA	-17	NA	57121546	57119682	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57120632_57121237
transcript_96528.known	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121491	57119681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57120635_57121292
transcript_9653.known	chr1	+	1094	4	FSM	ENSG00000230937.13	ENST00000670788.1	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	33.1360830515618	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418101	True	NA	20	True	ACTAAA	-21	NA	209428819	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429409_209430424_209430501_209431742_209431826_209432203
transcript_96533.nnic	chrX	-	907	3	NNC	ENSG00000147059.9	novel	1091	2	NA	NA	-167	4785	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGTTATTTAACCCATC	NA	False	NA	-3	True	AATAAA	-22	NA	57137690	57129744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_57129991_57136372_57136603_57137259
transcript_96534.known	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	20	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	NA	False	AATACA	-18	NA	57137625	57135649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57136603_57137259
transcript_96538.known	chrX	+	1980	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	6.3718129288296	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	57286601	True	NA	4	True	AATAAA	-16	NA	57286705	57489193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_96542.nnic	chrX	+	1927	10	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	-67	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	12.5235580476492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	NA	False	NA	4	True	AATAAA	-16	NA	57286638	57489193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57446927_57447040_57448523_57448719_57488756
transcript_96543.nnic	chrX	+	1679	9	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	-3	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	15.189943219117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCTGTTTTGGGTACA	57286598	True	NA	7	True	AATAAA	-19	NA	57286702	57489196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57488756
transcript_96544.nnic	chrX	+	1565	8	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	16.2103519457192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	57286589	True	NA	4	True	AATAAA	-16	NA	57286693	57489193	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57488756
transcript_96549.nic	chrX	+	1122	4	ISM	ENSG00000165591.7	ENST00000374900.5	1980	11	156	156850	156	-119823	5prime_fragment	FALSE	canonical	3	37	junction_1	8.25967446224258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGTTTCTGGTCTAGC	57286491	True	NA	NA	False	ATTAAA	-14	NA	57286861	57332343	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597
transcript_9655.nic	chr1	+	847	3	FSM	ENSG00000230937.13	ENST00000692388.1	843	3	-4	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_2	62.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418097	True	NA	20	True	ACTAAA	-21	NA	209428815	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209432203
transcript_96552.known	chrX	-	653	5	FSM	ENSG00000235437.9	ENST00000671338.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	27.5136329843952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACTAAAGTAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	63560942	63426891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63426997_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_96553.known	chrX	-	3088	5	FSM	ENSG00000235437.9	ENST00000662156.1	3088	5	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	29.2179311382582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTTGCCATTGAGCT	NA	False	NA	-22	True	NA	NA	NA	63561075	63426574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_96555.known	chrX	-	3879	4	FSM	ENSG00000235437.9	ENST00000654880.1	3879	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.2960963117119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTTAAGAAGCCAATAC	NA	False	NA	NA	False	AATAAA	-39	NA	63561063	63396557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63399904_63432363_63432492_63516909_63517083_63560831
transcript_96557.known	chrX	-	980	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	18.6607133363712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561071	63426557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
transcript_9656.nic	chr1	+	1018	3	NIC	ENSG00000230937.13	novel	1094	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_1	32.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418101	True	NA	20	True	ACTAAA	-21	NA	209428819	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_209429409_209431742_209431826_209432203
transcript_96560.known	chrX	-	2973	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	16.739839372653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTCTGTTCCGTTCT	NA	False	NA	-6	True	AATAAA	-16	NA	63561080	63426558	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
transcript_96562.known	chrX	-	2757	3	FSM	ENSG00000235437.9	ENST00000669201.1	2757	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTGAATCTAAAATAAAAG	NA	False	NA	NA	False	AATATA	-28	NA	63561063	63397506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63399904_63432363_63432492_63560831
transcript_96563.known	chrX	-	816	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561080	63426557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63426997_63432363_63432492_63560831
transcript_96565.nnic	chrX	-	891	3	NNC	ENSG00000235437.9	novel	2816	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	28.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561079	63426557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_63427073_63432363_63432492_63560831
transcript_96567.known	chrX	-	2814	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	0	2	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTCTGTTCCGTTC	NA	False	NA	-7	True	AATAAA	-15	NA	63561095	63426559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63428982_63432363_63432492_63560831
transcript_96568.known	chrX	-	667	2	FSM	ENSG00000235437.9	ENST00000608788.6	667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTTGGAAAGCTAAGT	NA	False	NA	NA	False	AATAAA	-33	NA	63561035	63399440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63399904_63560831
transcript_96569.known	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	NA	False	NA	-9	True	AATAAA	-20	NA	63351332	63347227	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63347200_63351300
transcript_9657.nic	chr1	+	935	2	FSM	ENSG00000230937.13	ENST00000691439.1	935	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418101	True	NA	20	True	ACTAAA	-21	NA	209428819	209432549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429409_209432203
transcript_96571.known	chrX	-	5285	10	FSM	ENSG00000131089.17	ENST00000624538.2	5285	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	38.8215289641084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	NA	False	NA	-36	True	NA	NA	NA	63755032	63635002	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
transcript_96572.known	chrX	-	1888	10	FSM	ENSG00000131089.17	ENST00000624210.3	1888	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	42.1973611017397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAAAAGTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	63755078	63637839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754920
transcript_96573.known	chrX	-	4702	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	13.3979913733181	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63785214	63634966	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_96575.known	chrX	-	2143	9	FSM	ENSG00000131089.17	ENST00000623517.3	2143	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	39.7775062063976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCATTGCTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	63785558	63637689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63785115
transcript_96576.nic	chrX	-	1558	9	NIC	ENSG00000131089.17	novel	3758	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	43.8634243989226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATAGATGGACCTTTT	NA	False	NA	-25	True	AATAAA	-14	NA	63785217	63637981	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_9658.known	chr1	+	2456	13	FSM	ENSG00000008118.10	ENST00000361322.3	2456	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.64991582276861	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTCATTTGGTTCTT	209583672	True	NA	6	True	AATAAA	-20	NA	209583713	209613939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209583773_209594954_209595076_209599982_209600112_209603213_209603289_209605535_209605675_209606319_209606444_209607857_209607934_209608979_209609093_209609850_209609930_209611464_209611553_209611791_209612217_209612784_209612913_209613039
transcript_96580.nic	chrX	-	1597	11	ISM	ENSG00000102043.16	ENST00000374852.4	2660	14	-21	63341	-21	0	5prime_fragment	FALSE	canonical	3	30	junction_3	10.0319489631876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCACTCAATGTTTGC	NA	False	NA	-22	True	AATAAA	-16	NA	64395473	64331421	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_96581.nic	chrX	-	1555	10	NIC	ENSG00000102043.16	novel	2660	14	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	17.2884033065199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGTTTGCACAGAGAT	NA	False	NA	-14	True	AATAAA	-24	NA	64395473	64331413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_64331758_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_96587.known	chrX	-	2660	14	FSM	ENSG00000102043.16	ENST00000374852.4	2660	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.8007829622255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGGTATGCTTAGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	64395452	64268080	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_64269044_64270946_64271074_64328771_64328901_64331556_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_96588.known	chrX	-	2724	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	20.3270140453535	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAATATTAGCACTT	NA	False	NA	NA	False	AATAAA	-35	NA	64976450	64915806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
transcript_96589.known	chrX	-	606	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAAGAGTCGGTCCCG	NA	False	NA	-42	True	NA	NA	NA	65034669	64917839	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
transcript_9659.known	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	209675334	True	NA	10	True	AATAAA	-19	NA	209675411	209676390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209675550_209675652
transcript_96594.known	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	223.859687669115	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534787	65512581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_96596.known	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_5	75.867574687009	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534754	65512581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_96608.known	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	248.988835091054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	65534798	65520466	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_9661.known	chr1	-	4684	2	FSM	ENSG00000162757.4	ENST00000294811.2	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGAATTTTGTCCC	-209783908	True	NA	NA	False	ATTAAA	-16	NA	209784559	209779207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_209783710_209784377
transcript_96610.known	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_9	63.3052569345987	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	65656063	True	NA	16	True	AATAAA	-17	NA	65667653	65741931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
transcript_96613.known	chrX	+	4431	21	FSM	ENSG00000089472.18	ENST00000343002.7	4431	21	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	22.9112963404518	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	66162402	True	NA	20	True	ATTAAA	-22	NA	66164246	66267389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_96614.known	chrX	-	3455	7	FSM	ENSG00000131080.15	ENST00000374719.8	3455	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	22.512342293852	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	NA	False	NA	-35	True	AATAAA	-19	NA	66639078	66595636	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
transcript_96622.known	chrX	-	2189	3	FSM	ENSG00000079482.14	ENST00000680804.1	2189	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTATATTTTG	NA	False	NA	NA	False	AATAAA	-37	NA	68433301	68411118	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_68413016_68432866_68433025_68433167
transcript_96623.known	chrX	-	964	3	FSM	ENSG00000079482.14	ENST00000680262.1	964	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAAGTGCTGGGATTGC	NA	False	NA	NA	False	NA	NA	NA	68433480	68430584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_68431078_68432866_68433025_68433167
transcript_96628.known	chrX	+	6010	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	22.0812892135702	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTGCCTATTC	68496198	True	NA	18	True	ATTAAA	-26	NA	68499050	68537282	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_9663.known	chr1	-	4478	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	9.7178958627884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-209804074	True	NA	-2	True	AATAAA	-26	NA	209806142	209785616	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
transcript_96632.known	chrX	+	734	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	122.088424239702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	68496196	True	NA	-61	True	NA	NA	NA	68499048	68531970	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_96638.known	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	130.466240844136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	68498587	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_96649.known	chrX	-	887	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAGGGAGAGGCGAG	NA	False	NA	NA	False	NA	NA	NA	69165449	69162325	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_69163135_69165371
transcript_96650.known	chrX	-	2755	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATAATGGAATTTT	NA	False	NA	-33	True	ATTAAA	-18	NA	69165521	69160861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_69163467_69165371
transcript_96652.known	chrX	+	1682	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	118.053660115503	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133022	True	NA	27	True	AATAAA	-33	NA	70133446	70166324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_96654.known	chrX	+	1862	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	11.1103555298649	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133024	True	NA	27	True	AATAAA	-33	NA	70133448	70166324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_96655.known	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	24.3276020647786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	70285100	True	NA	24	True	AATAAA	-21	NA	70290103	70420886	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
transcript_96658.nic	chrX	+	2500	21	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-78	25094	-78	-25094	5prime_fragment	FALSE	canonical	3	163	junction_1	19.1953119276557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCTGGGGAGAATCCAC	70285022	True	NA	NA	False	AAGAAA	-5	NA	70290025	70395792	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670
transcript_96661.nic	chrX	+	1864	16	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-78	46692	-78	-46692	5prime_fragment	FALSE	canonical	3	163	junction_1	18.8639574026472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAAGAATTGGTTC	70285022	True	NA	NA	False	CATAAA	-34	NA	70290025	70374194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150
transcript_96664.nic	chrX	+	813	6	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-78	118836	-78	4862	5prime_fragment	FALSE	canonical	3	163	junction_1	17.7426040929735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGTGACAAGTAA	70285022	True	NA	NA	False	NA	NA	NA	70290025	70302050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_96670.known	chrX	-	784	8	FSM	ENSG00000120509.11	ENST00000374454.1	784	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	159.68489379438	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGAGGATGATGATA	NA	False	NA	NA	False	NA	NA	NA	70289945	70286891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
transcript_96673.known	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_6	33.543090031911	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70289927	70286594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
transcript_96675.nic	chrX	-	1251	7	NIC	ENSG00000120509.11	novel	991	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	56	junction_6	132.964489829261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70289948	70286594	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289594_70289859
transcript_9668.known	chr1	-	4256	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	39.53655130242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTAGAAGACTACTT	-209804107	True	NA	-8	True	AATAAA	-20	NA	209806175	209785622	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
transcript_96680.known	chrX	+	2438	17	FSM	ENSG00000130055.14	ENST00000453994.6	2438	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.0319811376898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70430973_70431127_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_96681.known	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.2122948389505	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	70423052	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_96682.known	chrX	+	2171	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.5525087254426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_96683.known	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.6892770274468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_96685.nnic	chrX	+	1587	12	NIC	ENSG00000130055.14	novel	1993	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.7669482630351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	70423052	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_70423383_70426051_70426112_70426370_70426470_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_96686.known	chrX	+	5074	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	44.6251978597705	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	70451801	True	NA	9	True	AATAAA	-21	NA	70452304	70505487	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_96691.known	chrX	+	4529	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	19.2534208616555	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	70451026	True	NA	7	True	AATAAA	-19	NA	70455095	70505485	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_96703.known	chrX	-	3012	30	FSM	ENSG00000120498.14	ENST00000374333.7	3012	30	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.58620689655172	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTGACCAGCTCATTT	NA	False	NA	NA	False	AATAAA	-30	NA	70908711	70528939	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70529188_70529834_70530000_70552125_70552247_70553305_70553415_70554650_70554801_70591750_70591824_70605400_70605518_70606958_70607030_70609090_70609178_70610502_70610544_70623949_70624007_70624838_70624925_70629610_70629736_70651449_70651553_70670376_70670515_70678803_70678890_70682673_70682826_70722617_70722697_70725261_70725344_70740700_70740797_70744164_70744220_70806704_70806791_70833512_70833594_70853033_70853154_70853247_70853329_70860856_70860937_70873222_70873308_70879987_70880110_70907752_70907811_70908653
transcript_9671.known	chr1	+	8481	12	FSM	ENSG00000117597.18	ENST00000491415.7	8481	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.05117070169648	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGGAGTACTGATT	209826223	True	NA	5	True	ATTAAA	-19	NA	209827971	209857565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209828171_209830107_209830148_209830802_209831044_209833184_209833359_209835074_209835164_209836800_209837212_209838908_209839129_209840852_209841056_209842264_209842448_209842582_209842696_209843450_209843697_209851203
transcript_96717.known	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_11	78.9273125170053	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-32	True	ATTAAA	-10	NA	70931125	70925587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
transcript_96718.known	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	TRUE	canonical	3	194	junction_11	83.7516004534385	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	NA	False	NA	-23	True	AATAAA	-1	NA	70931096	70925578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
transcript_96747.known	chrX	+	330	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-34	True	NA	NA	NA	70962963	70963293	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70963000_70963300
transcript_96748.known	chrX	-	2286	4	FSM	ENSG00000147164.12	ENST00000374274.8	2286	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.49443825784929	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTTTTCCTGCTTAA	NA	False	NA	-18	True	ATTAAA	-15	NA	71068334	71059246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068141
transcript_96750.known	chrX	+	3644	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71095804	True	NA	13	True	AATAAA	-30	NA	71095850	71103532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71096982_71100683_71101741_71102076
transcript_96751.nic	chrX	+	2744	3	NIC	ENSG00000184481.17	novel	306	2	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	37.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71099207	False	NA	13	True	AATAAA	-30	NA	71099222	71103532	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_71099454_71100683_71101741_71102076
transcript_96752.nnic	chrX	+	1216	2	Antisense	novelGene_ENSG00000285171.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTCACGCCTGTAAT	71103759	True	NA	NA	False	AATAAA	-41	NA	71103823	71105292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrX_+_71104126_71104378
transcript_96754.known	chrX	-	277	2	FSM	ENSG00000204165.6	ENST00000466160.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGTGTGAAATTACTG	NA	False	NA	NA	False	AATAAA	-40	NA	71104448	71103986	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_71104113_71104297
transcript_96755.known	chrX	+	1710	12	FSM	ENSG00000147140.17	ENST00000450092.6	1710	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	730.018736315652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71242352	False	NA	NA	False	NA	NA	NA	71283760	71300076	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283989_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_96757.known	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	626.602776885005	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71242224	True	NA	31	True	ATTAAA	-21	NA	71283632	71301168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_96771.known	chrX	-	1867	7	FSM	ENSG00000147130.14	ENST00000373982.5	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.4317238892711	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	0	True	AATAAA	-18	NA	71254140	71249200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_96772.known	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	883.528563331272	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242181	True	NA	23	True	ATTAAA	-13	NA	71283589	71301160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_96773.known	chrX	+	987	3	FSM	ENSG00000147140.17	ENST00000678414.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	1025.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATTAAATGATATAAATG	71242232	True	NA	NA	False	NA	NA	NA	71283640	71286213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71285364
transcript_96774.known	chrX	+	3206	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	0	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	234.072723742003	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242201	True	NA	21	True	ATTAAA	-11	NA	71283609	71301158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
transcript_96775.known	chrX	+	2483	12	FSM	ENSG00000147140.17	ENST00000677879.1	2483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	731.472521416066	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242216	True	NA	23	True	ATTAAA	-13	NA	71283624	71301160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294349_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_96776.known	chrX	+	2768	13	FSM	ENSG00000147140.17	ENST00000678830.1	2768	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	928.393276790008	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242201	True	NA	23	True	ATTAAA	-13	NA	71283609	71301160	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297587_71297678_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_96777.known	chrX	+	2661	12	FSM	ENSG00000147140.17	ENST00000276079.13	2661	12	0	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	223.726847918033	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71242226	True	NA	31	True	ATTAAA	-21	NA	71283634	71301168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_96778.known	chrX	+	5435	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	57.5932645973826	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	71528734	True	NA	6	True	AATAAA	-19	NA	71533103	71575892	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_96779.known	chrX	+	3310	22	FSM	ENSG00000147162.14	ENST00000373701.7	3310	22	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	76.4750933918819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTATACCTGAGCCTCA	71528753	True	NA	5	True	AATAAA	-18	NA	71533122	71573816	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_9678.known	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234012	False	NA	2	True	AATAAA	-35	NA	210234044	210231455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_210231772_210233634
transcript_96783.known	chrX	+	1239	4	FSM	ENSG00000102309.15	ENST00000373669.8	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	127.146459731375	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGATTCTTAACAGA	72171876	True	NA	NA	False	AATAAA	-15	NA	72181756	72198340	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
transcript_96788.known	chrX	+	1780	3	FSM	ENSG00000102309.15	ENST00000218432.10	1780	3	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATGTGATTCTTAAC	72171795	True	NA	NA	False	AATAAA	-12	NA	72181675	72198337	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_72181829_72186460_72186535_72196784
transcript_96789.nnic	chrX	+	449	3	NIC	ENSG00000102309.15	novel	1323	4	NA	NA	2	191	combination_of_known_splicesites	FALSE	canonical	3	398	junction_1	494.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	72171797	True	NA	NA	False	AATAAA	-19	NA	72181677	72197545	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_72181829_72196784_72196905_72197367
transcript_96790.known	chrX	-	4218	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCATCCACTTTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	72239027	72204664	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72208699_72238843
transcript_96792.known	chrX	-	4344	3	FSM	ENSG00000186871.7	ENST00000373657.2	4344	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTTTGTTTCACTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	72239027	72204656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72208699_72237830_72237949_72238843
transcript_96798.known	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9294	junction_6	1390.4663985712	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	NA	False	NA	NA	False	CATAAA	-21	NA	72277248	72272041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
transcript_96799.known	chrX	-	1752	12	FSM	ENSG00000285547.1	ENST00000648922.1	1752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.4550214167413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGACCGAGCCAATG	NA	False	NA	NA	False	NA	NA	NA	72572843	72301810	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72302245_72302809_72302935_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_9680.known	chr1	+	1827	11	FSM	ENSG00000117625.14	ENST00000452621.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	8.44037913840368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	211257281	True	NA	13	True	AATAAA	-23	NA	211259387	211313298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_96801.known	chrX	-	1479	12	FSM	ENSG00000147099.21	ENST00000649274.1	1479	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	70.3928762361177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAACAGATCAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	72572704	72329724	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572105_72572650
transcript_96802.known	chrX	-	1700	11	FSM	ENSG00000147099.21	ENST00000647980.1	1700	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	64.8894444420662	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGTTATATATCT	NA	False	NA	-23	True	NA	NA	NA	72572847	72329567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491001_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96804.known	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	62.5264388523411	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96806.known	chrX	-	1695	9	FSM	ENSG00000147099.21	ENST00000373589.9	1695	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	56.2088738545792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	NA	False	NA	-15	True	NA	NA	NA	72573101	72329559	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_96814.known	chrX	-	2079	8	FSM	ENSG00000147099.21	ENST00000648036.1	2079	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	85.0812336918701	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATAAATGTTAGCTGT	NA	False	NA	-30	True	AATAAA	-3	NA	72572810	72473430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72474730_72488932_72489042_72490928_72491001_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96817.known	chrX	-	2044	7	FSM	ENSG00000147099.21	ENST00000650126.1	2044	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	86.2369152715678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATAAATGTTAGCTGT	NA	False	NA	-30	True	AATAAA	-3	NA	72572847	72473430	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72474730_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96819.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	87.8674427760362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	NA	False	NA	-2	True	TATAAA	-17	NA	72572816	72562219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96820.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	69.4712170614565	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	72572856	72567581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96821.known	chrX	-	836	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	13.9283882771841	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	72572853	72567581	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
transcript_96823.known	chrX	-	1363	7	FSM	ENSG00000269502.6	ENST00000615063.2	1363	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATATACGGGTTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	72943837	72872024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72872565_72873549_72873698_72873881_72873943_72874824_72874959_72875272_72875332_72875630_72875789_72943574
transcript_96824.known	chrX	-	2237	1	FSM	ENSG00000186288.5	ENST00000373519.1	2237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGGCTCTTAATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	73079512	73077275	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_73077300_73079500
transcript_96825.known	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	NA	False	NA	-9	True	AATAAA	-17	NA	73128080	73126036	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_73126000_73128100
transcript_96826.known	chrX	-	2553	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTATTTCTTGTTAT	NA	False	NA	-8	True	AATAAA	-36	NA	73214851	73212298	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_73212300_73214900
transcript_96827.known	chrX	+	1642	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	73446763	True	NA	NA	False	AATAAA	-22	NA	73447052	73455171	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73447756_73453516_73453663_73454378
transcript_96829.known	chrX	-	2519	4	FSM	ENSG00000230590.12	ENST00000668224.1	2519	4	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	18.006171781426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGGCTGAGGCAGGA	NA	False	NA	NA	False	AATACA	-42	NA	74292373	74278482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292168
transcript_9683.known	chr1	+	452	3	FSM	ENSG00000117625.14	ENST00000472734.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	211257499	False	NA	3	True	ATTAAA	-14	NA	211259605	211261202	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211259727_211260107_211260165_211260928
transcript_96830.known	chrX	-	2778	4	FSM	ENSG00000230590.12	ENST00000429124.6	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAAAGGTTCCCAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	74292620	74278212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292426
transcript_96831.known	chrX	-	2838	4	FSM	ENSG00000230590.12	ENST00000662864.1	2838	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.58653778449403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCATCTCAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	74293574	74278181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74293351
transcript_96833.nnic	chrX	+	578	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-60	92	-4	-92	intron_retention	FALSE	canonical	3	231	junction_2	172.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTGTTTGTTTGAA	73937005	True	NA	20	True	CATAAA	-20	NA	73944306	73947338	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_96835.known	chrX	-	1877	6	FSM	ENSG00000230590.12	ENST00000687056.1	3054	6	3	1174	-1	3	multi-exon	FALSE	canonical	2	14	junction_1	11.3771701226623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTATTTTCCCCCATCCC	NA	False	NA	NA	False	AATAAA	-23	NA	74292589	74202667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74203910_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_9684.known	chr1	+	3976	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	18.0124956627337	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	211325466	True	NA	20	True	AGTAAA	-22	NA	211326832	211374946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
transcript_96844.known	chrX	+	1818	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	203.692906111136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAATTTATACATTA	73937037	True	NA	62	True	AAAAAG	-40	NA	73944338	73999990	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
transcript_96845.known	chrX	+	1292	6	FSM	ENSG00000225470.8	ENST00000660546.1	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	201.630751622861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTGTTCTGGGCAA	NA	False	NA	1	True	AATATA	-13	NA	73944235	74004677	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_74004269
transcript_96847.known	chrX	+	1096	6	FSM	ENSG00000225470.8	ENST00000659852.1	1096	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	215.737803826775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCCCCCTGAGCCGT	73937040	True	NA	NA	False	TTTAAA	-40	NA	73944341	74004896	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73962734_73962802_73994839_73994962_73998767_73998845_74004269
transcript_96849.known	chrX	+	864	6	FSM	ENSG00000225470.8	ENST00000667294.1	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	214.926406009127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACTGTAAAACTACTA	73937040	True	NA	-43	True	ATTAAA	-17	NA	73944341	74004633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73994839_73994962_73998767_73998845_74004269
transcript_96853.known	chrX	+	5352	6	FSM	ENSG00000225470.8	ENST00000660856.1	5352	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	191.101439031735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTGCAGCCTGGGCG	73937020	True	NA	NA	False	NA	NA	NA	73944321	74007656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953_74000497_74004269
transcript_96857.known	chrX	+	962	5	FSM	ENSG00000225470.8	ENST00000667573.1	962	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	217.850149185168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	73937016	True	NA	16	True	AATAAA	-28	NA	73944317	74004551	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73998767_73998845_74004269
transcript_96860.known	chrX	+	1422	5	FSM	ENSG00000225470.8	ENST00000653885.1	1422	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	248.838300910451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTCAAACAAAAGATGTG	73937044	True	NA	-97	True	TATAAA	-1	NA	73944345	74000384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73962730_73962802_73994839_73994962_73999354
transcript_96864.known	chrX	+	3950	5	FSM	ENSG00000225470.8	ENST00000655090.1	3950	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	199.857918281963	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCGACAAAGACTGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	73944196	74007672	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_74004269
transcript_96865.known	chrX	+	5350	5	FSM	ENSG00000225470.8	ENST00000667886.1	5350	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	197.036005592887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_74000497_74004269
transcript_96871.known	chrX	+	5113	5	FSM	ENSG00000225470.8	ENST00000657179.1	5113	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	224.87037932996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	73937015	True	NA	NA	False	NA	NA	NA	73944316	74007534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73998953_74000497_74004269
transcript_96873.known	chrX	+	9658	6	FSM	ENSG00000225470.8	ENST00000639185.1	9658	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	220.877341526921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGCTTGTAGAAAG	NA	False	NA	NA	False	AAAACA	-10	NA	73944183	74012945	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73999354_74000497_74004269_74009949_74010546
transcript_96876.known	chrX	+	853	4	FSM	ENSG00000225470.8	ENST00000660087.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	236.6812202098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATATCTATATGT	73937039	True	NA	7	True	AATAAA	-19	NA	73944340	74004542	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_74004269
transcript_96877.known	chrX	+	1492	4	FSM	ENSG00000225470.8	ENST00000662120.1	1492	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	237.578525030264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAAAACTCGCTGA	73937015	True	NA	15	True	AGTAAA	-27	NA	73944316	74000496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73999354
transcript_96878.known	chrX	+	3758	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	193.634248577627	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	73937022	True	NA	NA	False	NA	NA	NA	73944323	74007684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
transcript_96881.known	chrX	+	3571	4	FSM	ENSG00000225470.8	ENST00000660840.1	3571	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	247.728794361002	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_74004269
transcript_96882.known	chrX	+	4628	4	FSM	ENSG00000225470.8	ENST00000668590.1	4628	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	252.009259089159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	73937022	True	NA	NA	False	NA	NA	NA	73944323	74007534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73999354_74000497_74004269
transcript_96887.nic	chrX	+	1015	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-131	-274	0	0	intron_retention	FALSE	canonical	3	231	junction_2	172.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	NA	False	NA	19	True	AATAAA	-16	NA	73944235	73947704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_9689.known	chr1	+	3508	6	FSM	ENSG00000153363.14	ENST00000423222.6	3536	6	28	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	46.3577393754268	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTTTCTTTTTTCCA	211382369	True	NA	NA	False	AATAAA	-19	NA	211382802	211435333	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_96890.known	chrX	+	3463	3	FSM	ENSG00000225470.8	ENST00000669149.1	3463	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	277.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	73937040	True	NA	NA	False	NA	NA	NA	73944341	74007529	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_74004269
transcript_96892.known	chrX	+	882	3	FSM	ENSG00000225470.8	ENST00000666493.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	73937016	True	NA	19	True	AATAAA	-16	NA	73944317	73947704	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944415_73944583_73944663_73946998
transcript_96894.known	chrX	+	782	5	FSM	ENSG00000225470.8	ENST00000602294.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.776734917848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGATGTTGTTCTGG	73937040	True	NA	-3	True	AATATA	-9	NA	73944341	74004673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994863_73994962_73998767_73998845_74004269
transcript_96895.known	chrX	+	483	2	FSM	ENSG00000225470.8	ENST00000453317.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTCTTGAAGCATCT	73937044	True	NA	NA	False	NA	NA	NA	73944345	73944946	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583
transcript_96896.known	chrX	-	3478	5	FSM	ENSG00000131263.13	ENST00000349225.2	3478	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	37.9143772202578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTTGAGATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	74614617	74590117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
transcript_96898.known	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	25.4863798048204	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	NA	False	NA	NA	False	TATAAA	-15	NA	74614624	74582975	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
transcript_9690.known	chr1	+	1671	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	13.0072095393286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	211382735	211399219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
transcript_96900.known	chrX	-	4592	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_15	36.9407934703929	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_96901.known	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	41.7846330073097	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_96905.known	chrX	-	2142	15	FSM	ENSG00000131269.19	ENST00000620875.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	68.8729975819143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACATAAGACATTTTCTT	NA	False	NA	-33	True	AAGAAA	-42	NA	75156272	75053369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114835_75156104
transcript_96907.nic	chrX	-	1854	8	ISM	ENSG00000131269.19	ENST00000669388.1	1836	14	-199	9911	-46	2559	5prime_fragment	FALSE	canonical	3	128	junction_7	31.2089730686545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAGAAAATAGCCTAT	NA	False	NA	NA	False	AGTAAA	-12	NA	75156332	75072926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_96910.known	chrX	-	2234	15	FSM	ENSG00000131269.19	ENST00000339447.8	2234	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.2795563642118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTATAATCCTTCTT	NA	False	NA	-10	True	ATTAAA	-16	NA	75156279	75053281	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114832_75156104
transcript_96915.known	chrX	+	1135	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	44.4393647890825	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATAATTATCTTATG	75273076	True	NA	NA	False	NA	NA	NA	75274115	75303519	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_96916.nic	chrX	+	2314	8	NIC	ENSG00000094841.14	novel	1135	8	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_7	54.0974177964614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75273028	True	NA	6	True	ATTAAA	-15	NA	75274067	75304600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_96917.nic	chrX	+	1740	8	NIC	ENSG00000094841.14	novel	1636	7	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	53.4186392601699	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75274375	True	NA	-22	True	NA	NA	NA	75274681	75304572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_75274759_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_96921.known	chrX	+	730	8	FSM	ENSG00000094841.14	ENST00000526850.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	57.4477579889693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTTTTGATTTTCTA	75285413	True	NA	NA	False	AGTAAA	-24	NA	75285433	75303548	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75285525_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_96924.known	chrX	+	2474	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	21.7670750344541	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	75273045	True	NA	NA	False	AATAAA	-32	NA	75274084	75304885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_96925.known	chrX	+	2234	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	48.8651773306468	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75273050	True	NA	6	True	ATTAAA	-15	NA	75274089	75304600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_96927.known	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	44.6081706516742	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75274717	False	NA	-22	True	NA	NA	NA	75274727	75304572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_96928.nic	chrX	+	1760	7	NIC	ENSG00000094841.14	novel	1636	7	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	58.8151529983747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75274375	True	NA	6	True	ATTAAA	-15	NA	75274681	75304600	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_9693.known	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	18	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	211398078	False	NA	7	True	AATAAA	-14	NA	211399257	211432534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211399438_211426210_211426284_211432318
transcript_96937.known	chrX	-	5578	12	FSM	ENSG00000102383.14	ENST00000373367.8	5578	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.3494456849386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTTTTTTCCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	75523037	75368426	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75505820_75505848_75522888
transcript_9694.known	chr1	+	681	6	FSM	ENSG00000153363.14	ENST00000657539.1	681	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.4790180567115	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	211382396	True	NA	8	True	AATAAA	-15	NA	211382829	211432535	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432320
transcript_96942.nic	chrX	-	1127	4	ISM	ENSG00000102383.14	ENST00000373367.8	5578	12	-254	81894	211	51171	5prime_fragment	FALSE	canonical	3	36	junction_2	7.48331477354788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTCTGTCATGCCTCA	NA	False	NA	NA	False	AATAAA	-16	NA	75523291	75450320	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_75450923_75478890_75478986_75505820_75505848_75522888
transcript_96944.nnic	chrX	-	2097	3	NIC	ENSG00000102383.14	novel	899	2	NA	NA	-146	533	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	19	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTGCTTTGTGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	75523648	75500958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_75502269_75505820_75505848_75522888
transcript_96947.known	chrX	+	1185	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	26.1640975384209	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	76162890	True	NA	137	True	NA	NA	NA	76173061	76178314	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
transcript_9695.known	chr1	-	1318	8	FSM	ENSG00000117650.13	ENST00000540251.5	1318	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.7279706636839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCCTCGTAGGCTCAA	-211673083	True	NA	NA	False	NA	NA	NA	211675630	211658656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211658713_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_96954.known	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	258.396013901144	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	76162868	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
transcript_96957.nic	chrX	+	1618	5	NIC	ENSG00000102390.11	novel	1185	6	NA	NA	-2	4	intron_retention	FALSE	canonical	3	605	junction_1	29.2264862752949	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATCTGTGACTGACTT	76162866	True	NA	23	True	AATAAA	-20	NA	76173037	76178200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_76173169_76173584_76173651_76174889_76175614_76176880_76176993_76177615
transcript_96966.known	chrX	+	3633	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	76427309	True	NA	NA	False	AATAAA	-17	NA	76427709	76431342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_76427700_76431300
transcript_96968.known	chrX	-	3071	10	FSM	ENSG00000085224.23	ENST00000624032.3	3071	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.3463201599583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAGGGAACTGAAG	NA	False	NA	98	True	GATAAA	-6	NA	77786208	77682304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77683452_77683538_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_96969.known	chrX	-	11165	35	FSM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_29	69.6999997517785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	77786216	77504879	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_9697.nic	chr1	-	2134	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	38.4144955633646	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	-211673098	True	NA	0	True	AATAAA	-23	NA	211675645	211662771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_96977.nnic	chrX	-	3332	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895454	77826363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828033_77828608_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_96978.nnic	chrX	-	3391	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895454	77826363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_96979.nnic	chrX	-	2252	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGAAAAGGACTCCC	NA	False	NA	NA	False	AAAAAG	-1	NA	77895454	77827443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828033_77828608_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_9698.known	chr1	-	2134	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.8321595661992	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	-211673074	True	NA	0	True	AATAAA	-23	NA	211675621	211662771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_96980.nnic	chrX	-	2311	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGAAAAGGACTCCC	NA	False	NA	NA	False	AAAAAG	-1	NA	77895454	77827443	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_96983.known	chrX	-	4047	10	FSM	ENSG00000102158.22	ENST00000358075.11	4047	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	12.5619452767397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895593	77826363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_96989.known	chrX	+	605	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2828.84550459881	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	77874842	True	NA	25	True	AATAAA	-19	NA	77899439	77905385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
transcript_9699.known	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.8036349692082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-212032943	True	NA	-5	True	AATAAA	-17	NA	212035557	211940402	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_97.known	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	1137.82325516752	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_970.known	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	118.404391810439	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	-10459169	True	NA	0	True	AATAAA	-33	NA	10472529	10456521	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_97011.known	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	6118	junction_7	297.033331462986	7658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	78054768	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
transcript_9704.nic	chr1	-	2706	17	ISM	ENSG00000143493.13	ENST00000366993.7	3422	20	-11	10941	-8	138	5prime_fragment	FALSE	canonical	3	131	junction_4	12.6910401464971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTTGCAATAATTCTC	-212032933	True	NA	2	True	AATAAA	-26	NA	212035547	211952288	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_97051.known	chrX	+	2363	2	FSM	ENSG00000248503.3	ENST00000686088.1	3827	2	59	1405	2	1	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	77910248	True	NA	NA	False	AATAAA	-17	NA	77910740	77964890	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_77910836_77962622
transcript_97052.known	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	39.8138027433815	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	NA	False	NA	-30	True	AATAAA	-13	NA	78139650	78129747	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_97054.known	chrX	+	553	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	14	3887	3	-179	multi-exon	FALSE	canonical	2	7	junction_1	1.29903810567666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACCCCTGCAGCCAGC	78746919	True	NA	NA	False	NA	NA	NA	78747733	78754827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_97056.nic	chrX	+	452	3	ISM	ENSG00000147145.14	ENST00000614823.5	4454	5	-34	7932	-23	-512	5prime_fragment	TRUE	canonical	2	7	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCCAATGTAAGTTCAT	78746871	True	NA	NA	False	AAAAAG	-9	NA	78747685	78750782	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_78748035_78750173_78750224_78750729
transcript_97058.known	chrX	+	2611	2	FSM	ENSG00000147145.14	ENST00000435339.3	2611	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAACTAAACCAAACC	78746913	True	NA	NA	False	AATAAA	-13	NA	78747727	78757094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78748035_78754790
transcript_97061.nic	chrX	-	1612	7	NIC	ENSG00000078596.11	novel	1616	6	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	127.007545707594	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367603	79360383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104_79367274_79367546
transcript_97065.known	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	21.7678662252413	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367334	79360383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
transcript_97067.known	chrX	-	1698	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	130.352167224024	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTGTTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	79367552	79360387	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
transcript_97069.known	chrX	-	6813	6	FSM	ENSG00000278530.5	ENST00000614414.4	6813	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	2.75680975041804	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTTTTCTTTAAAA	NA	False	NA	-3	True	AATAAA	-18	NA	80335364	80228488	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_80234591_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_9707.known	chr1	+	4409	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_10	15.0829339970439	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGCATTTAAGATGGC	212029167	True	NA	8	True	AATAAA	-22	NA	212035747	212105013	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_97074.known	chrX	-	742	4	FSM	ENSG00000198157.11	ENST00000447319.5	742	4	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_3	175.789647021661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGGAAAGATGTAAAAGT	NA	False	NA	17	True	GATAAA	-4	NA	81121688	81114834	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81121534
transcript_97076.known	chrX	-	572	5	FSM	ENSG00000198157.11	ENST00000373250.7	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	146.823874080478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAGATGGAAAAAA	NA	False	NA	-7	True	GATAAA	-31	NA	81121638	81114984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81121534
transcript_97077.known	chrX	-	578	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_4	20.3115730557729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGAAAAAGGGGAAGA	NA	False	NA	-76	True	NA	NA	NA	81121683	81115053	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_97078.known	chrX	-	547	6	FSM	ENSG00000198157.11	ENST00000491275.1	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	149.368001928124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAGAAGATGAAGAAGA	NA	False	NA	59	True	AGTAAA	-17	NA	81121688	81115110	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118781_81119787_81119818_81121534
transcript_97079.known	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	190.58200334764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	81198233	True	NA	6	True	ATTAAA	-16	NA	81202127	81297597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
transcript_97081.known	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	7.1336448530109	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	81198207	True	NA	12	True	AATAAA	-23	NA	81202101	81298547	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
transcript_97084.known	chrX	-	8465	22	FSM	ENSG00000072133.11	ENST00000262752.5	8465	22	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_10	9.17207632583725	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACCGTTGACCTCGCT	NA	False	NA	-11	True	AATAAA	-21	NA	84188199	84058349	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84187818
transcript_97085.known	chrX	-	6305	11	FSM	ENSG00000165259.14	ENST00000373177.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	11.3859562619922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84502453	84317877	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84488023_84488133_84502341
transcript_97086.known	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	5.76280110217331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	84502453	84317873	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
transcript_97088.known	chrX	-	475	3	FSM	ENSG00000165259.14	ENST00000465509.3	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTCTCTTTGGTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	84502453	84500024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84500305_84501428_84501512_84502341
transcript_97092.nnic	chrX	-	1116	3	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	-50	17552	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAATGATTTAAATAT	NA	False	NA	NA	False	AATAAA	-16	NA	85243961	85191223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_85191844_85224204_85224327_85243587
transcript_97093.known	chrX	-	3707	3	FSM	ENSG00000184788.14	ENST00000647304.1	3707	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCAAACAAATTTACAAG	NA	False	NA	NA	False	NA	NA	NA	85243870	85208775	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_85212078_85224204_85224327_85243587
transcript_97095.known	chrX	+	6480	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	7.46240577829965	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	85001549	True	NA	13	True	AATAAA	-18	NA	85003876	85093315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_97097.known	chrX	-	2821	5	FSM	ENSG00000188419.14	ENST00000615443.1	2821	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	20.5243757517738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTGATTTATTTTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	86047539	85969086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_85971587_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_97098.known	chrX	-	678	2	FSM	ENSG00000188419.14	ENST00000483950.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAGTTTAAGATAAAG	NA	False	NA	NA	False	NA	NA	NA	86047561	86026957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_86027558_86047483
transcript_97099.known	chrX	+	2417	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.31487853899762	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	86147740	True	NA	2	True	AATAAA	-16	NA	86148450	86832602	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
transcript_97101.known	chrX	+	5765	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	11.9753914341035	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGACAATGCTTG	87516214	True	NA	NA	False	AATAAA	-15	NA	87517801	87670050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_97103.nnic	chrX	+	2311	6	NNC	ENSG00000102271.14	novel	3703	12	NA	NA	109287	-1663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.2912858453553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGTGTGGCTTTAGAAT	87627067	True	NA	8	True	AATAAA	-16	NA	87627100	87667933	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_87627180_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_97104.nic	chrX	+	1303	4	ISM	ENSG00000102271.14	ENST00000373114.4	2445	11	-74	51243	-62	-51243	5prime_fragment	FALSE	canonical	3	74	junction_1	14.0554457615387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGTACAACTGCGTA	87516152	True	NA	NA	False	AATAAA	-15	NA	87517739	87618353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931
transcript_97105.known	chrX	+	3206	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTGACTGCATAGTAT	91434672	True	NA	NA	False	AATAAA	-19	NA	91434838	91438584	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_91434895_91435434
transcript_97106.known	chrX	+	9022	11	FSM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	35.5392740499859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGTTATTGTGTGT	91774802	True	NA	NA	False	AATAAA	-17	NA	91779374	92623230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_92201374_92201456_92263113_92263144_92387734_92387934_92468298_92468323_92618263
transcript_97107.nic	chrX	+	1308	5	ISM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	787106	0	-43874	5prime_fragment	FALSE	canonical	3	68	junction_2	4.18330013267038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTAAGCCATCACCC	91774802	True	NA	NA	False	AATAAA	-22	NA	91779374	91836124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460
transcript_97109.known	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	20.9723627662693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_97112.known	chrX	-	2649	1	FSM	ENSG00000186310.10	ENST00000373079.4	2649	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCCTTTTCTCCTGACT	NA	False	NA	NA	False	AATAAA	-31	NA	93673578	93670929	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_93670900_93673600
transcript_97125.nnic	chrX	+	811	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625724	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	226.29273077145	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302584	True	NA	15	True	AGTAAA	-20	NA	97310565	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97128.nnic	chrX	+	827	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625724	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	235.327516453134	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302584	True	NA	15	True	AGTAAA	-20	NA	97310565	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97346805_97347003_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_9713.nnic	chr1	+	1399	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-2	-1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTGGGGTTTTTTT	212029165	True	NA	11	True	AATACA	-15	NA	212035745	212103436	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212035801_212100335_212101085_212102841
transcript_97130.nnic	chrX	+	858	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	238.319953004359	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302597	True	NA	15	True	AGTAAA	-20	NA	97310578	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97315689_97315894_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97132.nnic	chrX	+	762	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	234.222629137323	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302597	True	NA	15	True	AGTAAA	-20	NA	97310578	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97326577_97326723_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97139.nnic	chrX	+	700	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625691	0	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_1	117.086506481319	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302551	True	NA	15	True	AGTAAA	-20	NA	97310532	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_9714.nnic	chr1	+	2808	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-2	-161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTCCTTTTCTGAGC	212029165	True	NA	14	True	AATAAA	-14	NA	212035745	212104845	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212035801_212100335_212101085_212102841
transcript_97146.nnic	chrX	+	617	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_1	199.226472889523	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302597	True	NA	15	True	AGTAAA	-20	NA	97310578	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_9715.known	chr1	-	483	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	-212051489	False	NA	NA	False	NA	NA	NA	212052006	212051523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212051500_212052000
transcript_97152.nnic	chrX	+	496	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625695	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	228.702621080059	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302555	True	NA	15	True	AGTAAA	-20	NA	97310536	97469835	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
transcript_97171.nnic	chrX	+	791	3	NNC	ENSG00000281566.3	novel	625	4	NA	NA	5	-45458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATAATTCGCATTGAT	98572072	True	NA	NA	False	AATAAA	-19	NA	98573814	98599768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_98573933_98578985_98579075_98599184
transcript_97172.known	chrX	+	822	2	FSM	ENSG00000281566.3	ENST00000650384.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAATGATGCT	98572067	True	NA	9	True	NA	NA	NA	98573809	98645226	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_98573933_98644527
transcript_97173.known	chrX	+	1309	6	FSM	ENSG00000281566.3	ENST00000626665.3	1309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.23904756996088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	98572116	True	NA	27	True	AATAAA	-29	NA	98573858	98865564	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98785026_98785125_98864610
transcript_97174.nic	chrX	+	1242	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8659	0	-29	0	3prime_fragment	FALSE	canonical	3	18	junction_3	5.40832691319598	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGATTGCTGCTGAAC	100593324	True	NA	6	True	AATAAA	-19	NA	100593594	100599885	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
transcript_97177.known	chrX	-	3768	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_7	68.3493427405211	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCATTTCTGGTTTT	NA	False	NA	-33	True	AATAAA	-17	NA	100636806	100627107	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
transcript_97183.nic	chrX	-	1757	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-91	-1916	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	358.716931207176	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGTTTAAATTAACTT	NA	False	NA	-24	True	AATAAA	-20	NA	100636897	100629024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_97189.nic	chrX	-	1090	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-91	2371	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	358.716931207176	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTTCCTCTTGACTG	NA	False	NA	-14	True	AGTAAA	-16	NA	100636897	100629691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_9721.known	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	14.9734458837187	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-212412946	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_97210.known	chrX	+	2570	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	28.094304419729	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	100815536	True	NA	NA	False	AATAAA	-18	NA	100820390	100841520	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_97233.known	chrX	-	3106	13	FSM	ENSG00000188917.15	ENST00000545398.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	30.727634142576	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-23	NA	101052116	101009345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
transcript_9724.nnic	chr1	-	1808	7	NIC	ENSG00000065600.13	novel	2119	9	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	46.2904477787324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGTGTGACAATATGAA	-212412978	True	NA	-12	True	AATAAA	-16	NA	212414918	212364475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212365377_212375192_212375301_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_97242.known	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	101078479	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101079123_101094572
transcript_97243.known	chrX	+	3377	23	FSM	ENSG00000102384.14	ENST00000684367.1	3377	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.7681633835313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAAGGTGGGTGGATC	101095784	True	NA	NA	False	NA	NA	NA	101098187	101163795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101098235_101098443_101098540_101099808_101099931_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_97246.known	chrX	+	5584	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.74069553379661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	101095800	True	NA	10	True	AATAAA	-20	NA	101098203	101166126	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_97255.known	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101346661_101348532
transcript_97259.known	chrX	-	2951	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101348402_101348532
transcript_97261.known	chrX	-	1358	8	FSM	ENSG00000102393.14	ENST00000493905.6	1358	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	114.211225725113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407908	101397802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101399743_101399801_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_97264.known	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	26.4033878297632	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407925	101397802	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_97265.known	chrX	-	1254	7	FSM	ENSG00000102393.14	ENST00000676156.1	1254	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	96.518852505036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	NA	False	NA	-25	True	ATTAAA	-14	NA	101407903	101397808	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401667_101401810_101403810_101403986_101407709
transcript_97266.known	chrX	+	433	6	FSM	ENSG00000241343.10	ENST00000372849.8	433	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3755.70726228762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTTCATTTGTT	101305422	True	NA	16	True	AATAAA	-10	NA	101391015	101395786	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101392049_101392096_101395334_101395458_101395727
transcript_97273.known	chrX	-	1431	6	FSM	ENSG00000102393.14	ENST00000466414.2	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	28.1950350239187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTGCCAACTACT	NA	False	NA	-20	True	ATTAAA	-19	NA	101407822	101397803	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_97274.known	chrX	+	761	5	FSM	ENSG00000241343.10	ENST00000553110.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	5778	junction_4	1234.79580801848	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGTACACTGTAACAT	101305417	True	NA	6	True	AATAAA	-22	NA	101391010	101396155	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_97276.known	chrX	+	399	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	3501.47561750757	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	101391184	False	NA	25	True	AATAAA	-19	NA	101391201	101395795	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_97281.known	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	732.126127567284	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	101305395	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
transcript_97283.known	chrX	+	2240	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	891.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	101305417	True	NA	-5	True	AAAAAG	-9	NA	101391010	101393852	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754
transcript_97285.nic	chrX	-	1441	3	ISM	ENSG00000102393.14	ENST00000674634.2	1089	6	-82	2540	5	-2540	5prime_fragment	FALSE	canonical	3	250	junction_1	27.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGCCCCAGCTGGAAA	NA	False	NA	-9	True	AATAAA	-20	NA	101407985	101400819	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_101401810_101403810_101403986_101407709
transcript_97286.known	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	0	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	101396930	True	NA	26	True	AATAAA	-26	NA	101408221	101414133	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101408320_101411935
transcript_97287.known	chrX	-	1424	8	FSM	ENSG00000102393.14	ENST00000649178.1	1424	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	106.954882725266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTTATTGCCAACT	NA	False	NA	-23	True	ATTAAA	-16	NA	101407912	101397806	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101405110_101405234_101407709
transcript_97291.known	chrX	+	403	4	FSM	ENSG00000196440.12	ENST00000430461.5	403	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.8878405775519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAGAAAAACAATTTTA	101417067	True	NA	NA	False	NA	NA	NA	101418297	101446132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997
transcript_97292.known	chrX	+	346	2	FSM	ENSG00000196440.12	ENST00000453574.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGGTGGTTCTCAAAT	101417068	True	NA	16	True	TTTAAA	-35	NA	101418298	101419183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101418371_101418909
transcript_97296.known	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	19.6129209111409	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546941	True	NA	NA	False	AATAAA	-30	NA	101550546	101554700	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
transcript_97301.known	chrX	-	542	5	FSM	ENSG00000198960.11	ENST00000462302.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	53.260562332743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTGCAGGCAATGTT	NA	False	NA	NA	False	GGGGCT	-31	NA	101617913	101615512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101615761_101616671_101616767_101617282_101617371_101617502_101617585_101617884
transcript_97305.known	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	19.6015872373189	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
transcript_97307.nnic	chrX	-	643	4	NNC	ENSG00000198960.11	novel	1840	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	55.4035698809703	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	101618007	101615124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_101615468_101616671_101616767_101617502_101617585_101617884
transcript_97308.known	chrX	-	624	4	FSM	ENSG00000198960.11	ENST00000495964.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	58.1262992686328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAACCTGGGGCCCCAGG	NA	False	NA	NA	False	NA	NA	NA	101617976	101616395	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101616767_101617291_101617371_101617502_101617585_101617884
transcript_97311.known	chrX	-	1840	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	101618000	101615124	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101616767_101617502_101617585_101617884
transcript_97312.known	chrX	-	670	2	FSM	ENSG00000198960.11	ENST00000467089.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTTTGCCGAGCCCAA	NA	False	NA	NA	False	NA	NA	NA	101618000	101616212	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101616767_101617884
transcript_97313.known	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	28.6476438821764	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101620922	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_97316.known	chrX	+	3730	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	46.8401537145215	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101622785	False	NA	27	True	AATAAA	-37	NA	101622796	101627843	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_97319.known	chrX	+	3318	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	67.4240313241503	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	101621132	False	NA	25	True	AATAAA	-35	NA	101623360	101627841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_9732.nnic	chr1	-	681	3	NNC	ENSG00000287445.1	novel	1727	2	NA	NA	-55	308	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGGTGGTCTTCT	-212432777	True	NA	0	True	AATAAA	-22	NA	212432830	212429960	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_212430332_212431740_212431845_212432624
transcript_97321.known	chrX	+	506	5	FSM	ENSG00000102401.20	ENST00000467808.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	66.1338604649691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTATTGTCGGGGA	101621027	False	NA	NA	False	NA	NA	NA	101623255	101624952	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623431_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_97323.known	chrX	-	758	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	87.8831041782207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGAGGCAGTGGCCC	NA	False	NA	NA	False	NA	NA	NA	101659831	101657310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
transcript_97324.known	chrX	-	821	6	FSM	ENSG00000184867.14	ENST00000440675.5	821	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	104.494975955785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCAGAGTGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	101659835	101657274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659407_101659502_101659757
transcript_97325.known	chrX	-	2819	6	FSM	ENSG00000184867.14	ENST00000356824.9	2819	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	38.8710689330767	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659850	101655280	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659418_101659502_101659757
transcript_97329.known	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	84.4952069646557	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	NA	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
transcript_9734.known	chr1	-	836	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCGTCTTCTGTCTTCT	-212699590	False	NA	-1	True	AATACA	-16	NA	212699840	212686416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212686980_212696960_212697066_212699672
transcript_97342.known	chrX	-	580	5	FSM	ENSG00000184867.14	ENST00000431597.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	116.531916228989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTGGGTCAGGATTCA	NA	False	NA	NA	False	NA	NA	NA	101659796	101657400	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101659075_101659149_101659418_101659502_101659757
transcript_97343.known	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	103.82286597855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	NA	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
transcript_97344.known	chrX	+	1110	3	FSM	ENSG00000184905.9	ENST00000372780.6	1110	3	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	7.5	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGAATCTGTCTGTTT	102123719	True	NA	11	True	AATAAA	-17	NA	102125678	102127712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102125807_102126372_102126446_102126803
transcript_97345.known	chrX	-	1106	3	NIC	ENSG00000204071.11	novel	1104	4	NA	NA	0	0	intron_retention	TRUE	canonical	3	12	junction_1	5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTATACGGTTATCAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	102142505	102140475	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_102141356_102141713_102141787_102142352
transcript_97346.known	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	13	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	NA	False	NA	-9	True	AATAAA	-15	NA	102155977	102153711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_102154303_102154743_102154811_102155858
transcript_97349.known	chrX	-	634	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	0	0	0	multi-exon	TRUE	canonical	3	866	junction_1	5	901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGACTCCTGTGGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	102516739	102513681	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_102514125_102515063_102515181_102516665
transcript_97356.known	chrX	+	1848	6	FSM	ENSG00000271147.8	ENST00000476910.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	40.2541923282532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGGCTTCTTTTACT	102597743	True	NA	NA	False	AATACA	-14	NA	102599536	102640507	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879_102601978_102605481_102605654_102639399
transcript_9736.known	chr1	-	790	7	FSM	ENSG00000117697.15	ENST00000626725.1	790	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	191.856717370021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAACTTTATAACAC	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212738561	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212738687_212739533_212739602_212766188_212766274_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_97366.known	chrX	+	668	4	FSM	ENSG00000271147.8	ENST00000475738.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	28.7672653471886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGGTAAGCAAATAGAG	102597732	True	NA	NA	False	AATAGA	-14	NA	102599525	102639527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399
transcript_97377.known	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	30	junction_1	43.3922676163494	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597716	True	NA	17	True	AATAAA	-25	NA	102599509	102604159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
transcript_97378.known	chrX	+	2664	3	FSM	ENSG00000125962.16	ENST00000477663.6	2664	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	58.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597728	True	NA	17	True	AATAAA	-25	NA	102599521	102604159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599860_102601463_102601510_102601879
transcript_97379.known	chrX	+	2636	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	22	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597744	True	NA	17	True	AATAAA	-25	NA	102599537	102604159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102601463_102601510_102601879
transcript_97380.known	chrX	+	2899	6	FSM	ENSG00000125962.16	ENST00000246174.6	2899	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	43.5366512262944	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102599135	True	NA	17	True	AATAAA	-25	NA	102599167	102604159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599267_102599347_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879
transcript_97381.known	chrX	+	3534	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	0	2	0	0	multi-exon	TRUE	canonical	0	0	junction_1	34.8523672079817	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	102710967	True	NA	11	True	AATAAA	-19	NA	102712447	102717731	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
transcript_97384.known	chrX	+	5155	4	FSM	ENSG00000198908.12	ENST00000457056.6	5155	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.6267856622271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTCCTTTATTTCT	102719827	True	NA	NA	False	AATAAA	-16	NA	102720742	102753540	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102720826_102720956_102721092_102747816_102747912_102748698
transcript_97387.known	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	102744828	True	NA	8	True	AATAAA	-15	NA	102745978	102752438	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102746175_102747816_102747912_102748698
transcript_97390.known	chrX	-	795	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	27.5	979	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATATTCTTTTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	103064171	103062650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103063280_103063641_103063732_103064095
transcript_97392.known	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_1	16	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	103196660	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103215239_103215681_103215765_103216148
transcript_97396.known	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	103196676	True	NA	-81	True	NA	NA	NA	103215123	103217099	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103215239_103216148
transcript_97398.known	chrX	-	1174	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_2	5.5	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	NA	False	NA	-9	True	AATAAA	-20	NA	103255155	103252994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103254018_103254604_103254678_103255077
transcript_9740.known	chr1	-	13115	6	FSM	ENSG00000117697.15	ENST00000366977.8	13115	6	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	24.5519856630783	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	-212785388	True	NA	0	True	AATAAA	-23	NA	212791777	212726152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_97400.known	chrX	-	1131	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	NA	False	NA	-9	True	AATAAA	-20	NA	103255185	103252994	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103254018_103255077
transcript_97403.nnic	chrX	-	1206	3	NNC	ENSG00000204065.3	novel	1046	3	NA	NA	494	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	25.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	NA	False	NA	-17	True	AATAAA	-21	NA	103276256	103273690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_103274591_103275274_103275343_103276018
transcript_97404.known	chrX	-	1046	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_2	8	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	NA	False	NA	-17	True	AATAAA	-21	NA	103276750	103273690	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103274591_103275274_103275343_103276672
transcript_97405.known	chrX	-	1077	3	FSM	ENSG00000133134.12	ENST00000536889.1	1077	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	189	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTCTCTGCATTC	NA	False	NA	-9	True	AATAAA	-9	NA	103310955	103309353	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103309982_103310357_103310434_103310582
transcript_97406.known	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	31	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	NA	False	NA	-1	True	AATAAA	-17	NA	103310990	103309345	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103309982_103310357_103310434_103310859
transcript_97407.known	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	169.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	103311007	103309501	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103309982_103310357_103310434_103310895
transcript_97408.known	chrX	+	1134	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	15.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	103329705	True	NA	NA	False	AATAAA	-20	NA	103330238	103332326	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103330305_103330922_103331041_103331376
transcript_97410.known	chrX	+	1028	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_2	4.5	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	103350917	True	NA	103	True	AATAAA	-18	NA	103356505	103358462	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103356607_103357082_103357162_103357614
transcript_97411.known	chrX	+	699	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	103350900	True	NA	-5	True	AATAAA	-5	NA	103356488	103358195	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103356607_103357614
transcript_97412.known	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	103350929	True	NA	96	True	AATAAA	-11	NA	103356517	103358455	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103356500_103358500
transcript_97413.known	chrX	+	913	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_2	1981.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	103376239	False	NA	48	True	AATAAA	-21	NA	103376394	103378077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103376614_103377027_103377107_103377462
transcript_97414.known	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_2	484.5	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	103333378	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103376614_103377027_103377107_103377509
transcript_97418.known	chrX	+	805	2	FSM	ENSG00000166681.14	ENST00000372635.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAATCTATAC	103376287	False	NA	31	True	AATAAA	-4	NA	103376406	103378060	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103376614_103377462
transcript_97419.known	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	103376836	False	NA	42	True	AATAAA	-15	NA	103376915	103378071	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103377107_103377509
transcript_97425.known	chrX	+	681	4	FSM	ENSG00000133142.19	ENST00000490644.5	681	4	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_2	394.594306429612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGGGAGAGTCAGAGA	103575467	True	NA	89	True	GATAAA	-45	NA	103585522	103586905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103585858_103586108_103586218_103586292_103586648
transcript_97427.known	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	395.5	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	103575507	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103586218_103586292_103586653
transcript_97430.known	chrX	+	338	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	77.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGGATAAAGGAAAGCC	103575559	True	NA	33	True	AAAACA	-27	NA	103585614	103586849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585684_103586218_103586292_103586653
transcript_97434.known	chrX	+	1571	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	103575477	True	NA	-23	True	AAAACA	-11	NA	103585532	103587694	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103585858_103586292_103586648
transcript_97436.known	chrX	+	959	2	FSM	ENSG00000133142.19	ENST00000415568.2	959	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGCAGAACCAAATATA	103575459	True	NA	-1	True	ATTAAA	-7	NA	103585514	103587502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103586653
transcript_97437.known	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	21.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	103605450	True	NA	21	True	AATAAA	-32	NA	103607962	103609927	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103608059_103608603_103608674_103609037
transcript_97438.known	chrX	+	1124	3	FSM	ENSG00000196507.11	ENST00000243286.7	1124	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	45.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGTATCAGCCCGTT	103605393	True	NA	20	True	AATAAA	-31	NA	103607905	103609926	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103608071_103608603_103608674_103609037
transcript_97439.known	chrX	+	721	3	FSM	ENSG00000172465.14	ENST00000372626.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTCTGTTTGCAT	103628672	True	NA	NA	False	NA	NA	NA	103628703	103630447	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103628794_103629493_103629562_103629884
transcript_97441.known	chrX	+	1164	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103628971	True	NA	NA	False	AATAAA	-24	NA	103628998	103630953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103629026_103629493_103629562_103629884
transcript_97442.known	chrX	+	1200	3	FSM	ENSG00000172465.14	ENST00000372625.8	1200	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103628947	True	NA	NA	False	AATAAA	-24	NA	103628974	103630953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103629026_103629493_103629574_103629884
transcript_97443.nic	chrX	+	1478	2	ISM	ENSG00000172465.14	ENST00000372625.8	1200	3	190	0	166	0	3prime_fragment	FALSE	canonical	1	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103629154	True	NA	NA	False	AATAAA	-24	NA	103629164	103630953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_103629574_103629884
transcript_97448.nic	chrX	-	2062	5	NIC	ENSG00000123562.18	novel	869	5	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_2	714.165378256325	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	NA	False	NA	-4	True	AATAAA	-25	NA	103686897	103675497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103686630
transcript_97449.known	chrX	-	849	5	FSM	ENSG00000123562.18	ENST00000418819.5	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	691.737847742915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTAATGAAGTTGTGGC	NA	False	NA	NA	False	AAGAAA	-31	NA	103688041	103676496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103687988
transcript_97450.known	chrX	-	562	5	FSM	ENSG00000123562.18	ENST00000422355.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	789.69519436299	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGATCCGTGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	103686705	103676825	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678621_103684680_103684730_103685170_103685261_103686630
transcript_97452.known	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	737.224991098376	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	NA	False	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
transcript_97453.known	chrX	-	899	5	FSM	ENSG00000123562.18	ENST00000434230.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	705.391557930771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATGAAGTTGTGGCAG	NA	False	NA	NA	False	AAGAAA	-33	NA	103688038	103676494	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103687988
transcript_97458.known	chrX	-	451	4	FSM	ENSG00000123562.18	ENST00000498064.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	446.164643252789	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103686816	103676978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103686630
transcript_97459.known	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	699.718673626924	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	NA	False	NA	-2	True	AATAAA	-27	NA	103688064	103675495	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
transcript_97460.nnic	chrX	-	1867	4	NIC	ENSG00000123562.18	novel	1866	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	840.922641441464	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	NA	False	NA	-4	True	AATAAA	-25	NA	103686731	103675497	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_103677052_103678498_103678621_103685170_103685261_103686630
transcript_97463.known	chrX	-	370	4	FSM	ENSG00000123562.18	ENST00000467755.5	370	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	651.022955731124	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103686684	103676978	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103686630
transcript_97464.known	chrX	-	1965	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	752.713461787123	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103688158	103675499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
transcript_97468.known	chrX	-	1830	3	FSM	ENSG00000123562.18	ENST00000451301.5	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	827.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103686818	103675499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103685170_103685261_103686630
transcript_97469.known	chrX	-	582	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	70	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGTTTAAGAATAGA	NA	False	NA	NA	False	AAGAAA	-32	NA	103688122	103676693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103685170_103685261_103687988
transcript_97473.nnic	chrX	-	838	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1538	-684	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTAGTCTTTGGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	103767077	103750081	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_103750433_103764961_103765155_103766783
transcript_97474.nnic	chrX	-	2410	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1538	-4351	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGGAGGAAGTGCAGC	NA	False	NA	1	True	AATAAA	-25	NA	103767077	103753748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_103755672_103764961_103765155_103766783
transcript_97478.nic	chrX	-	831	3	NIC	ENSG00000288597.1	novel	2186	12	NA	NA	1538	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	120.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	NA	False	NA	-3	True	ATTAAA	-22	NA	103767077	103761191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_103761536_103764961_103765155_103766783
transcript_97479.nic	chrX	-	834	3	ISM	ENSG00000288597.1	ENST00000674274.1	2186	12	65156	0	1538	0	3prime_fragment	FALSE	canonical	3	65	junction_1	124.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	NA	False	NA	-3	True	ATTAAA	-22	NA	103767077	103761191	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_103761539_103764961_103765155_103766783
transcript_97480.known	chrX	-	4080	2	FSM	ENSG00000288597.1	ENST00000674403.1	4080	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATCTCTCTTATTTA	NA	False	NA	NA	False	AATAAA	-8	NA	103768615	103762906	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103765155_103766783
transcript_97482.known	chrX	+	2896	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	8.5374989832438	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103776531	True	NA	6	True	AATAAA	-23	NA	103776849	103792619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_97485.known	chrX	+	1666	4	FSM	ENSG00000158427.15	ENST00000419165.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.455652906562	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGGTTCATTCTG	103918851	True	NA	NA	False	AATAAA	-25	NA	103918895	103965987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103919293_103962020_103962724_103964505_103964623_103965538
transcript_97486.known	chrX	+	663	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	66.9593574906118	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAATCGTTGTTGTCT	103962492	True	NA	NA	False	AATAAA	-6	NA	103962674	103965968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
transcript_97487.known	chrX	+	2002	2	FSM	ENSG00000158427.15	ENST00000455723.1	2002	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTCAAAAGAAAAAGA	103919043	True	NA	NA	False	CATAAA	-33	NA	103919186	103932911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103919293_103931015
transcript_97489.known	chrX	+	652	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	18	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	103962444	True	NA	NA	False	AATAAA	-14	NA	103962626	103965976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103962724_103964505_103964623_103965538
transcript_97492.known	chrX	-	947	3	FSM	ENSG00000269226.7	ENST00000598087.3	947	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	16	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGGTTCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	104076212	104072567	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_104073325_104074240_104074358_104076139
transcript_97494.known	chrX	+	1241	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	104112308	True	NA	5	True	TATAAA	-8	NA	104112543	104115842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
transcript_97495.nnic	chrX	+	1122	3	NIC	ENSG00000166707.12	novel	2940	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	104112287	True	NA	5	True	TATAAA	-8	NA	104112522	104115842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_104113002_104113194_104113247_104115251
transcript_97496.nnic	chrX	-	878	3	NNC	ENSG00000269743.3	novel	6207	2	NA	NA	44603	-2355	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTTTGATCCTGTTT	NA	False	NA	NA	False	AATAAA	-42	NA	104112385	104101568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_104102211_104111307_104111474_104112315
transcript_97497.known	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	NA	False	NA	NA	False	NA	NA	NA	104156988	104130603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_104131224_104156877
transcript_97498.known	chrX	+	3852	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_8	7.30080647243364	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	106611750	True	NA	6	True	ATTAAA	-16	NA	106611977	106679439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_97499.known	chrX	+	2589	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	6.00688310424792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	106801281	True	NA	NA	False	AATAAA	-26	NA	106802688	106849831	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
transcript_975.known	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	48.9846914862184	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	-10459128	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_9750.known	chr1	-	1344	5	FSM	ENSG00000117697.15	ENST00000366978.5	1344	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	190.255748927595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	-212791537	False	NA	0	True	AATAAA	-23	NA	212791581	212726152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212727180_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_97500.known	chrX	+	4098	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	4.85340659285368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATTTATAAGAAAAA	106801297	True	NA	NA	False	AATGAA	-4	NA	106802704	106830083	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
transcript_97508.known	chrX	-	2579	8	FSM	ENSG00000089682.17	ENST00000372487.5	2579	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	25.8370087356908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	107118800	107064419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107065759_107067555_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_97512.nic	chrX	-	1759	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	-7	5253	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	25.3288574635368	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-12	True	AATAAA	-21	NA	107118829	107067137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_97516.known	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	15.8157797433098	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-12	True	AATAAA	-21	NA	107118804	107067137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_97524.nic	chrX	-	1688	8	NIC	ENSG00000198088.10	novel	1755	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	8.01529150806031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	NA	False	NA	-44	True	AATAAA	-21	NA	107206455	107123471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
transcript_97525.known	chrX	-	1515	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	9.77098880473324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	NA	False	NA	-44	True	AATAAA	-21	NA	107206433	107123471	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
transcript_97528.known	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_5	13.0384048104053	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	107622447	True	NA	16	True	AATAAA	-19	NA	107628509	107651026	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_9753.known	chr1	-	722	5	FSM	ENSG00000117697.15	ENST00000366976.3	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	176.877605987869	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGCAAACTAAAGACTG	-212785393	True	NA	NA	False	NA	NA	NA	212791782	212738482	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212738687_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_97530.known	chrX	+	1434	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	165.70141821964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	107622427	True	NA	NA	False	NA	NA	NA	107628489	107650469	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_97532.known	chrX	+	996	6	FSM	ENSG00000147224.13	ENST00000674826.1	996	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	167.733836777199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCCCACATCAGGTATA	107622453	True	NA	79	True	NA	NA	NA	107628515	107650142	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_107628751_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_97534.known	chrX	+	444	2	FSM	ENSG00000147224.13	ENST00000646815.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACTTTGTGATTGGCAA	107622447	True	NA	NA	False	AATAAA	-16	NA	107628509	107630219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_107628751_107630016
transcript_97535.known	chrX	-	2199	4	FSM	ENSG00000157514.18	ENST00000372384.6	2199	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.8609251320834	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGTGTCTGACTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	107775988	107713223	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107775099_107775512_107775779
transcript_97536.known	chrX	-	956	4	FSM	ENSG00000157514.18	ENST00000506081.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	50.6118124112895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTCCACTCCAGCGACA	NA	False	NA	NA	False	NA	NA	NA	107777067	107714369	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107775099_107775526_107776969
transcript_97537.known	chrX	-	1812	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	53.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107716545	107713220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107716314
transcript_97538.known	chrX	-	2027	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	27	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107717135	107713220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107716689
transcript_97539.known	chrX	-	2269	3	FSM	ENSG00000157514.18	ENST00000372383.9	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	47	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107775787	107713220	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107775099
transcript_97540.known	chrX	-	779	6	FSM	ENSG00000101843.19	ENST00000372295.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	236.793074223044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTTCTACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	108091542	108084774	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087685_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_97541.known	chrX	-	878	6	FSM	ENSG00000101843.19	ENST00000372296.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.717729530003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAATGTTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	108091542	108084596	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087764_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_97542.known	chrX	-	1470	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_2	10.688779163216	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAATTTTTCTTTCAA	NA	False	NA	-18	True	AATAAA	-13	NA	108091542	108084206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
transcript_97544.known	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	227.476372399421	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	NA	False	NA	NA	False	TATAAA	-19	NA	108091542	108084829	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
transcript_97545.known	chrX	-	713	4	FSM	ENSG00000101843.19	ENST00000340200.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	280.43577200889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGTTCCTGCTGAG	NA	False	NA	NA	False	TATAAA	-6	NA	108091520	108084842	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108091406
transcript_97549.known	chrX	+	2205	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	5.50946155868853	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	108091397	True	NA	13	True	AATAAA	-22	NA	108091777	108154671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_97552.known	chrX	+	2129	12	FSM	ENSG00000101844.18	ENST00000345734.7	2129	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_8	7.41341201377277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	NA	False	NA	13	True	AATAAA	-22	NA	108091667	108154671	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137885_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_97554.known	chrX	-	1889	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.0213499897497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	NA	False	NA	-19	True	AATAAA	-19	NA	108438430	108267641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
transcript_97555.known	chrX	-	1784	4	FSM	ENSG00000197565.17	ENST00000477085.1	1784	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	10.6144555520604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	NA	False	NA	-19	True	AATAAA	-19	NA	108439497	108267641	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108439357
transcript_97559.known	chrX	+	2692	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	47.097637945018	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	109535694	True	NA	13	True	AATAAA	-14	NA	109535780	109544684	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
transcript_97560.known	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.4406682011537	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	109535660	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
transcript_97561.known	chrX	+	1085	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	54.2361093327642	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTCAGTGGTCGTT	109535934	False	NA	NA	False	NA	NA	NA	109537117	109543206	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
transcript_97562.known	chrX	-	5032	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_14	53.2596991688421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTTGTACTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	109733403	109641336	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
transcript_97563.known	chrX	-	4891	16	FSM	ENSG00000068366.21	ENST00000672401.1	4891	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_14	37.2304534845691	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGTACTTCATTAT	NA	False	NA	-3	True	AATAAA	-18	NA	109733257	109641334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109696143_109696197_109733138
transcript_97567.known	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	56.4009426032102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	NA	False	NA	-113	True	GATAAA	-11	NA	109733220	109641533	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
transcript_97570.known	chrX	-	5350	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	12.0731106182293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTTTATGTTTCTT	NA	False	NA	-6	True	AATAAA	-14	NA	110318085	110194185	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
transcript_97571.known	chrX	-	3052	5	FSM	ENSG00000101935.12	ENST00000372059.6	3052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.292877650971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGTAAATAAAACAAGCAA	NA	False	NA	NA	False	AAAAAG	-7	NA	110318084	110196371	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110317598
transcript_97572.known	chrX	-	546	2	FSM	ENSG00000101935.12	ENST00000496695.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGTGTGTTTCTTTTCT	NA	False	NA	0	True	AATAAA	-18	NA	110317756	110309149	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_110309538_110317598
transcript_97578.known	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	5.79451368873082	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	NA	False	NA	-2	True	AATAAA	-21	NA	111270483	111245098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
transcript_97582.known	chrX	+	693	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	34.1833292702744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGAAATTTTATGTT	111678605	True	NA	10	True	AATAAA	-19	NA	111681188	111688128	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
transcript_97590.known	chrX	+	585	4	FSM	ENSG00000101901.12	ENST00000623255.1	585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.2910046630673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTAATAAACTTCCTA	111678650	True	NA	-21	True	ATTAAA	-36	NA	111681233	111688097	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681300_111682131_111682301_111684964_111685104_111687886
transcript_97595.nic	chrX	+	1236	4	NIC	ENSG00000101901.12	novel	1098	5	NA	NA	0	158	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.8854278742681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGTTTTAAAATTGAC	111678592	True	NA	6	True	AATAAA	-23	NA	111681175	111688800	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_111681300_111682235_111682295_111684964_111685104_111687886
transcript_97596.known	chrX	+	916	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	31.0590834807897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	111678595	True	NA	NA	False	NA	NA	NA	111681178	111688254	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
transcript_97599.known	chrX	+	679	4	FSM	ENSG00000101901.12	ENST00000482374.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	33.8854278742681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTATGTTGTGCAC	111678608	True	NA	16	True	AATAAA	-25	NA	111681191	111688134	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111687886
transcript_97602.known	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	36.3715395452116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	111681162	True	NA	24	True	AATAAA	-39	NA	111681662	111688040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
transcript_97604.known	chrX	+	458	4	FSM	ENSG00000101901.12	ENST00000623189.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.4794317352357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATTTTATGTTGTGC	111681796	False	NA	14	True	AATAAA	-23	NA	111681812	111688132	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681827_111682235_111682295_111684964_111685104_111687886
transcript_97609.known	chrX	-	1559	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	NA	False	NA	NA	False	AATAAA	-26	NA	112679938	112630647	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
transcript_9761.known	chr1	-	685	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	21	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAGTTATAGTGAGT	-212785393	True	NA	NA	False	AATGAA	-3	NA	212791782	212784140	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212784494_212787558_212787638_212791529
transcript_97614.nnic	chrX	-	1221	3	NNC	ENSG00000182508.14	novel	629	3	NA	NA	-39029	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGATGTTTCTGCTAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	112719083	112630650	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_112631602_112716304_112716446_112718954
transcript_97615.known	chrX	-	347561	2	FSM	ENSG00000241743.4	ENST00000674361.1	347561	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTTTGTTGGTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	113991976	113616299	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_113963600_113991715
transcript_97620.nnic	chrX	+	1725	4	NNC	ENSG00000288595.1	novel	503	3	NA	NA	-43	2414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.6129209111409	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	114040323	True	NA	19	True	AATAAA	-15	NA	114040344	114058192	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_114040637_114042335_114042534_114055650_114056549_114057855
transcript_97621.known	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	114034423	True	NA	18	True	AATAAA	-18	NA	114040387	114050858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_114040637_114042335_114042534_114050494
transcript_97623.known	chrX	+	503	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	17.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAACTATTGCAGAA	114034495	False	NA	NA	False	NA	NA	NA	114040459	114055778	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_114040637_114042335_114042534_114055650
transcript_97624.nnic	chrX	-	2460	3	NNC	ENSG00000289287.1	novel	1603	3	NA	NA	-37	877	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	17	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATTTATAATCCAGTA	NA	False	NA	-11	True	AATAAA	-18	NA	114606933	114593528	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_114595599_114604483_114604586_114606645
transcript_97627.nnic	chrX	-	1583	3	NNC	ENSG00000289287.1	novel	1603	3	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	17	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606933	114594405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_114595599_114604483_114604586_114606645
transcript_97630.nnic	chrX	-	1777	3	FSM	ENSG00000289287.1	ENST00000692140.1	930	3	-45	-802	-45	0	multi-exon	FALSE	canonical	3	54	junction_2	9.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606941	114594405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_114595599_114604483_114604772_114606645
transcript_97632.nnic	chrX	-	777	3	NNC	ENSG00000289287.1	novel	1603	3	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	17	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAGAACTCATGGGTT	NA	False	NA	-26	True	AATAAA	-14	NA	114606933	114595211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_114595599_114604483_114604586_114606645
transcript_97635.nnic	chrX	-	971	3	FSM	ENSG00000289287.1	ENST00000692140.1	930	3	-45	4	-45	-4	multi-exon	FALSE	canonical	3	54	junction_2	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAGAACTCATGGGTT	NA	False	NA	-26	True	AATAAA	-14	NA	114606941	114595211	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_114595599_114604483_114604772_114606645
transcript_97639.nnic	chrX	-	1493	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	-49	0	-49	0	multi-exon	FALSE	canonical	3	55	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606945	114594405	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_114595599_114606645
transcript_97641.nnic	chrX	-	691	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	-49	802	-49	0	multi-exon	FALSE	canonical	3	55	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACTCATGGGTTTGTT	NA	False	NA	-22	True	AATAAA	-18	NA	114606945	114595207	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_114595599_114606645
transcript_97643.known	chrX	-	4953	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_13	4.23408785926792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTGGTATTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	115234096	115110615	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
transcript_97646.known	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	933	junction_8	73.7697920711603	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	115552978	True	NA	20	True	AGTAAA	-25	NA	115561173	115650861	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
transcript_9765.known	chr1	+	1381	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	109.276520921428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAACCTCCACTTCCCA	212789564	True	NA	NA	False	NA	NA	NA	212791827	212815597	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
transcript_97657.known	chrX	+	444	3	FSM	ENSG00000229335.2	ENST00000451869.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	115839416	True	NA	NA	False	NA	NA	NA	115840963	115843048	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_115841079_115842643_115842764_115842839
transcript_97658.known	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	115839462	True	NA	NA	False	NA	NA	NA	115841009	115843050	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_115841079_115842839
transcript_97659.known	chrX	+	4114	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_4	23.606187272881	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	118344321	True	NA	30	True	ATTAAA	-40	NA	118346105	118449961	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_97662.nic	chrX	+	956	2	ISM	ENSG00000131725.14	ENST00000371822.9	3877	18	18	71074	-15	-14331	5prime_fragment	FALSE	canonical	3	138	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAAAATTATCCAGGT	118344306	True	NA	NA	False	ACTAAA	-11	NA	118346090	118378884	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_118346581_118378418
transcript_97663.known	chrX	+	2197	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	118823713	True	NA	8	True	AATAAA	-15	NA	118823823	118826968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
transcript_97667.known	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	7057	junction_3	401.07300526906	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	119430985	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
transcript_97668.nnic	chrX	-	1226	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3935788692406	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565415	119538148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538458_119539538_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_97669.nnic	chrX	-	1292	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3935788692406	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565415	119538148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538495_119539509_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_9767.known	chr1	+	2527	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.166646668264	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	212789630	True	NA	15	True	ATTAAA	-26	NA	212791893	212816830	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_97670.nnic	chrX	-	1276	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3935788692406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565415	119538148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538509_119539539_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_97671.nnic	chrX	-	1236	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3935788692406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTGTTAACCTTCTTG	NA	False	NA	-11	True	ATTAAA	-15	NA	119565415	119538150	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538500_119539568_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_97672.nnic	chrX	-	980	7	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.1776169920255	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565415	119538148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538505_119541369_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_97674.known	chrX	-	2301	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	5.66911711723165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565409	119538148	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_97681.known	chrX	+	1771	6	FSM	ENSG00000077721.16	ENST00000630695.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	236.12454340877	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGTATCTTTTTTTTT	119569140	True	NA	19	True	AATAAA	-21	NA	119574562	119584425	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119574756_119574907_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
transcript_97682.known	chrX	-	1617	11	FSM	ENSG00000125354.24	ENST00000489216.5	1617	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	87.7704392150341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTAAGTCTAAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	119693370	119616715	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119616743_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_97684.known	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	46.6801885171857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_97685.known	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	84.1917271089045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	119693370	119616711	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_97686.known	chrX	-	2693	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	79.6596153705731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	119693370	119617638	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_97689.known	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	81.7720408615724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_9769.known	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_8	83.003049177964	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	212789620	True	NA	14	True	AATAAA	-10	NA	212791883	212816617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
transcript_97692.nnic	chrX	-	387	3	NNC	ENSG00000198918.8	novel	390	3	NA	NA	0	17387	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	4833	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTGTGGGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	119791630	119769116	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119769343_119789907_119790012_119791573
transcript_97694.known	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	9679	junction_2	667	4415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	NA	False	NA	-9	True	AATAAA	-23	NA	119791630	119786503	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119786733_119789907_119790012_119791573
transcript_97695.known	chrX	-	1915	2	FSM	ENSG00000198918.8	ENST00000468844.1	1915	2	0	0	0	0	multi-exon	FALSE	canonical	3	11013	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGTTGTATTGTGGT	NA	False	NA	-11	True	AATAAA	-21	NA	119791595	119786505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119786733_119789907
transcript_97697.nic	chrX	-	2241	11	NIC	ENSG00000125351.13	novel	2335	10	NA	NA	0	3062	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	80.6923168585461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTCATCCTGAATT	NA	False	NA	2	True	AGTAAA	-21	NA	119852998	119830959	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_119831760_119834919_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97699.known	chrX	-	2343	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	84.8693702109306	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGTTTATTAACT	NA	False	NA	-2	True	AATAAA	-24	NA	119852963	119834021	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97700.known	chrX	-	2335	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	30.0185128064518	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTAAGTGTGTTTATT	NA	False	NA	-6	True	AATAAA	-20	NA	119852998	119834025	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97705.nic	chrX	-	1212	9	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-14	3866	-14	374	5prime_fragment	FALSE	canonical	3	206	junction_4	31.6027589776589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAATGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119853012	119837891	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97706.nic	chrX	-	935	8	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-12	4456	-12	-216	5prime_fragment	FALSE	canonical	3	206	junction_3	29.749978562846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAGCCAAGAAATTG	NA	False	NA	-94	True	AAAAAG	-25	NA	119853010	119838481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97708.nic	chrX	-	833	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-33	7127	-33	-2887	5prime_fragment	FALSE	canonical	3	206	junction_2	31.0559530882925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGATATAGAAAAGCTA	NA	False	NA	15	True	NA	NA	NA	119853031	119841152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97709.nic	chrX	-	776	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	7188	-37	-2948	5prime_fragment	FALSE	canonical	3	206	junction_2	31.0559530882925	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGACAAAGAGA	NA	False	NA	-46	True	AAGAAA	-30	NA	119853035	119841213	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_97716.known	chrX	-	1259	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCCTGGATTAAAAGC	NA	False	NA	52	True	NA	NA	NA	119871733	119870474	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119870500_119871700
transcript_97719.known	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	3633	junction_2	17.5	3680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	119860616	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119872014_119873303_119873394_119876513
transcript_97720.known	chrX	-	1394	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_6	59.0591599584688	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATTGATATAACTTTA	NA	False	NA	-20	True	AATAAA	-5	NA	119943604	119925069	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
transcript_97724.known	chrX	+	412	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTGAAGTCTGG	119896133	True	NA	3	True	AATAAA	-15	NA	119896192	119903652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119896268_119903213_119903393_119903494
transcript_97725.nnic	chrX	+	1584	3	FSM	ENSG00000258545.7	ENST00000687648.1	1536	3	-49	1	-49	0	multi-exon	FALSE	canonical	3	52	junction_2	2	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTCTCTGATTCCTT	120139774	True	NA	17	True	AATAAA	-17	NA	120140660	120146854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_120140850_120143722_120143901_120145637
transcript_97726.nnic	chrX	+	1443	3	NNC	ENSG00000258545.7	novel	1536	3	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTCTCTGATTCCTT	120139782	True	NA	17	True	AATAAA	-17	NA	120140668	120146854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_120140717_120143722_120143901_120145637
transcript_97727.known	chrX	-	2384	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	40	0	10	0	multi-exon	FALSE	canonical	3	10	junction_1	6	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTGCACTGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	120245233	120236457	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120238243_120240226_120240356_120244763
transcript_97728.known	chrX	-	3350	9	FSM	ENSG00000125355.16	ENST00000371369.9	3350	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.53602571593056	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTGTGTCAAGGTAGC	NA	False	NA	1	True	AATAAA	-19	NA	120311461	120258649	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120261029_120268243_120268388_120276884_120277048_120285126_120285216_120287153_120287223_120291250_120291341_120293988_120294052_120304348_120304492_120311251
transcript_97730.known	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	81.2757651455832	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	120469296	120426147	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_97734.known	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	102.232272301852	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	NA	False	NA	0	True	AATAAA	-24	NA	120469306	120436493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_97736.known	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	52	junction_20	30.010164944565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120561453	120524611	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
transcript_97738.known	chrX	-	5915	20	FSM	ENSG00000158290.19	ENST00000371322.11	5915	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	124	junction_8	19.7652427241509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATAATTATGCTTTGT	NA	False	NA	-10	True	ATTAAA	-26	NA	120560962	120523857	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
transcript_97744.known	chrX	+	9577	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	19.4010309004444	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTGTCTTTACTT	120600828	True	NA	NA	False	AATAAA	-19	NA	120604100	120621159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_97748.known	chrX	-	1636	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTGAGAAAAAAAACTGA	NA	False	NA	-19	True	ATTAAA	-18	NA	120630054	120625673	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120627172_120629916
transcript_9775.known	chr1	+	794	9	FSM	ENSG00000203705.11	ENST00000526997.5	794	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	127.454832685936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATCTGAACTGAAG	212789642	True	NA	-88	True	AATAGA	-10	NA	212791905	212815225	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212812250_212812329_212815012
transcript_97752.known	chrX	-	1298	3	FSM	ENSG00000236126.3	ENST00000441330.3	1298	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGGAAGATTTTTCAATA	NA	False	NA	NA	False	AATAAA	-28	NA	120976068	120972745	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120972887_120974024_120974181_120975067
transcript_97754.nnic	chrX	+	784	5	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_4	36.6776498701866	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	122217682	True	NA	19	True	AGTAAA	-19	NA	122222348	122248544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122248315
transcript_9776.known	chr1	+	1073	9	FSM	ENSG00000203705.11	ENST00000526641.5	1073	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	120.81798034647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTTATATAGAACCACC	212789606	True	NA	102	True	NA	NA	NA	212791869	212815415	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_97763.known	chrX	+	936	4	FSM	ENSG00000125675.20	ENST00000611689.4	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12.0830459735946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	123183625	True	NA	11	True	AATAAA	-24	NA	123184298	123204683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123184645_123185831_123185991_123202635_123202783_123204399
transcript_97764.known	chrX	+	644	3	FSM	ENSG00000125675.20	ENST00000479118.1	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTAATTTTAGAACC	123183886	False	NA	59	True	AATAAA	-27	NA	123184559	123253702	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123184645_123185831_123185991_123253302
transcript_97765.known	chrX	-	5600	39	FSM	ENSG00000125676.20	ENST00000245838.13	5600	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.9499244353496	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATATTATTGTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	123733052	123600568	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_123601339_123610917_123610964_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_97769.nic	chrX	-	2832	23	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-41	17495	-41	-4180	5prime_fragment	FALSE	canonical	2	214	junction_2	24.8566551608442	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTTGTTCTAGTAG	NA	False	NA	-1	True	AATAAA	-43	NA	123733097	123627692	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_97772.nic	chrX	-	1944	18	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-41	27897	-41	-14582	5prime_fragment	FALSE	canonical	3	238	junction_11	22.8320178272154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGAATGAAACA	NA	False	NA	NA	False	NA	NA	NA	123733097	123638094	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_97776.nic	chrX	-	1064	10	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-41	57989	-41	121	5prime_fragment	FALSE	canonical	3	238	junction_3	25.8719544041682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAGAAGAGGAGAAAG	NA	False	NA	13	True	AAGAAA	-2	NA	123733097	123668186	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_97778.known	chrX	+	8415	7	FSM	ENSG00000101966.13	ENST00000434753.7	8415	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.21455025366432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTATTTGTTT	123859704	False	NA	NA	False	AATAAA	-38	NA	123859811	123913976	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123859906_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_9778.known	chr1	+	498	6	FSM	ENSG00000203705.11	ENST00000488246.6	498	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	21.918029108476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCTACATTTATTTT	212789660	True	NA	5	True	ATTAAA	-24	NA	212791923	212804498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319
transcript_97780.known	chrX	+	8558	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	0.763762615825973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	123859997	False	NA	NA	False	AATAAA	-34	NA	123860052	123913972	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_97781.known	chrX	+	533	6	FSM	ENSG00000101966.13	ENST00000497640.1	533	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.77359245282264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCAGCTAAGGCGCCT	123860147	True	NA	NA	False	NA	NA	NA	123860194	123906998	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123860294_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_97783.known	chrX	+	4281	34	FSM	ENSG00000101972.20	ENST00000371144.7	4281	34	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	67.6676369537838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAATCTGAAGAGGCAT	123958377	True	NA	NA	False	TTTAAA	-17	NA	123961738	124100902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_97785.known	chrX	+	5991	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	50.8247217773988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958356	True	NA	NA	False	AATAAA	-22	NA	123961717	124102656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_97786.nic	chrX	+	2979	23	NIC	ENSG00000101972.20	novel	4281	34	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	81.2653545567831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAATCTGAAGAGGCAT	123958343	True	NA	NA	False	TTTAAA	-17	NA	123961704	124100902	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_123961857_124022530_124022553_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_9779.nic	chr1	+	1649	4	ISM	ENSG00000203705.11	ENST00000488246.6	498	6	-37	5946	3	870	5prime_fragment	FALSE	canonical	3	386	junction_1	19.94993734326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAAATTCA	212789623	True	NA	NA	False	NA	NA	NA	212791886	212798552	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111
transcript_97792.nnic	chrX	+	2645	8	NNC	ENSG00000101972.20	novel	6031	33	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	144.618428272189	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATGTTTTCTCTTGT	123958343	True	NA	14	True	AATAAA	-16	NA	123961704	124102499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_123961857_124022530_124022574_124056127_124056236_124057865_124057973_124090860_124090965_124094017_124094145_124095371_124095450_124100573
transcript_97794.known	chrX	-	326	2	FSM	ENSG00000232412.1	ENST00000426367.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCGTTTCTGTTCCATT	NA	False	NA	-3	True	CATAAA	-19	NA	123961341	123959232	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_123959406_123961188
transcript_97795.known	chrX	-	84	1	FSM	ENSG00000226532.1	ENST00000412004.1	84	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAATGTGTTC	NA	False	NA	-48	True	NA	NA	NA	124326258	124326174	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_124326200_124326300
transcript_97800.known	chrX	-	3989	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_13	67.3621921448193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	129523490	129446505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_97802.nnic	chrX	-	3831	25	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	-13	-249	combination_of_known_splicesites	FALSE	canonical	3	107	junction_1	105.859568598634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCACTTCTTTGTTGCT	NA	False	NA	-19	True	ATTAAA	-20	NA	129523513	129446754	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_129447302_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_97805.known	chrX	-	3948	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_12	95.2852646714909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	129523485	129446505	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_97812.nic	chrX	-	1375	10	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-13	53272	-13	8278	5prime_fragment	FALSE	canonical	3	469	junction_5	30.7105161543914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAAGATTTACTTGG	NA	False	NA	NA	False	TATAAA	-34	NA	129523513	129499776	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_97814.known	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.944869606397	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	NA	False	NA	-18	True	AATACA	-21	NA	129843886	129803287	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
transcript_97820.known	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	23.0780618505001	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	129902523	True	NA	6	True	AATAAA	-17	NA	129906163	129929752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_97824.nnic	chrX	+	891	8	NNC	ENSG00000156697.13	novel	2507	15	NA	NA	-1	-9623	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	69.2396017390308	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGAAAAGTTTGATTC	129902479	True	NA	NA	False	AATAAA	-16	NA	129906119	129913440	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129912578_129912711_129913309
transcript_97826.known	chrX	-	2107	16	FSM	ENSG00000156709.15	ENST00000675240.1	2107	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	134.185675672016	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGAAATAAATTCTGA	NA	False	NA	NA	False	NA	NA	NA	130165825	130129396	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130129629_130129969_130130103_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_97827.known	chrX	-	2192	16	FSM	ENSG00000156709.15	ENST00000319908.8	2192	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.404210214396	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAATTAAATTCTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	130165830	130129374	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130129629_130129969_130130167_130131674_130131797_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139869_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_97829.known	chrX	-	1883	15	FSM	ENSG00000156709.15	ENST00000674997.1	1883	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	140.440215328917	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATTAAATTCTGTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	130165656	130129372	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130165550
transcript_9783.known	chr1	-	2565	2	FSM	ENSG00000198468.10	ENST00000356684.8	2565	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTTTCTTTTTTTTAT	-212856500	True	NA	NA	False	CATAAA	-16	NA	212858125	212852104	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212854310_212857765
transcript_97834.known	chrX	+	952	1	FSM	ENSG00000286650.1	ENST00000664768.1	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCAGTTTACAATGG	130165905	True	NA	NA	False	ATTAAA	-19	NA	130165953	130166905	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130166000_130166900
transcript_97835.known	chrX	+	945	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	130171902	False	NA	5	True	AATAAA	-15	NA	130171961	130184870	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130172321_130184284
transcript_9784.known	chr1	-	633	2	FSM	ENSG00000198468.10	ENST00000424044.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	-212856458	True	NA	-26	True	AATAAA	-40	NA	212858083	212856603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212856919_212857765
transcript_97842.nic	chrX	+	1431	11	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	22.7246562130211	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338373	True	NA	27	True	ATTAAA	-17	NA	130339899	130373357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130349823_130349868_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_97844.known	chrX	+	1615	11	FSM	ENSG00000102078.16	ENST00000545805.6	1615	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	35.5990168403567	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338392	True	NA	27	True	ATTAAA	-17	NA	130339918	130373357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130339977_130340106_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_97847.known	chrX	+	1403	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	23.7580395749406	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTGTCTTCATTTA	130338361	True	NA	31	True	ATTAAA	-21	NA	130339887	130373361	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_9785.known	chr1	-	929	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	13	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	-212856500	True	NA	-26	True	AATAAA	-40	NA	212858125	212856603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212857173_212857765
transcript_97850.nic	chrX	+	1295	9	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	23.0458103567655	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338379	True	NA	27	True	ATTAAA	-17	NA	130339905	130373357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_9786.known	chr1	-	1814	2	FSM	ENSG00000198468.10	ENST00000651970.1	1814	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATGAATACTGAATTAC	-212856501	True	NA	NA	False	AATAAA	-16	NA	212858126	212855468	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212856922_212857765
transcript_97861.nnic	chrX	+	1138	8	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	34.4922351510349	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338380	True	NA	27	True	ATTAAA	-17	NA	130339906	130373357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_130339977_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_97865.nnic	chrX	+	1052	7	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	35.9045803330005	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338380	True	NA	27	True	ATTAAA	-17	NA	130339906	130373357	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_130339977_130349250_130349346_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_97868.known	chrX	+	751	5	FSM	ENSG00000102078.16	ENST00000464184.5	751	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	18.5674446276271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCAGTGTATTTTTTT	130338384	True	NA	NA	False	NA	NA	NA	130339910	130358987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130358639
transcript_97871.known	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	21.9872690436989	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	130399194	True	NA	5	True	CATAAA	-16	NA	130401986	130413656	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
transcript_97872.nic	chrX	+	589	5	ISM	ENSG00000134597.17	ENST00000305536.11	1823	6	-63	2132	-63	0	5prime_fragment	FALSE	canonical	3	128	junction_3	18.7683243791235	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	130399131	True	NA	1	True	AAAAAG	-10	NA	130401923	130411524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347
transcript_97875.known	chrX	+	729	4	FSM	ENSG00000134597.17	ENST00000469953.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	18.6726180988812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	130399208	True	NA	1	True	AAAAAG	-10	NA	130402000	130411524	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347
transcript_97876.known	chrX	-	5126	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	6.59506618307835	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	130903209	130622324	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_97877.known	chrX	-	3963	14	FSM	ENSG00000165675.19	ENST00000370935.5	3963	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	14.9278342932386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACTCCTTACCAT	NA	False	NA	NA	False	AATAAA	-7	NA	130903234	130623368	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130901683_130901732_130903048
transcript_9788.known	chr1	+	5919	10	FSM	ENSG00000162769.13	ENST00000366971.9	5919	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	81.047463612532	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	212852361	True	NA	9	True	AATAAA	-19	NA	212858274	212899363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_97881.known	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	12.3161479367536	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	131289286	131284165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_97884.known	chrX	-	1786	5	FSM	ENSG00000147255.19	ENST00000370900.5	1786	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.9406481131655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	131289060	131284165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289021
transcript_97885.known	chrX	-	1805	4	FSM	ENSG00000213468.7	ENST00000650184.1	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	60.1793615416079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAATATATGGGAACTT	NA	False	NA	NA	False	AATAAA	-28	NA	131830604	131795049	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131796332_131804971_131805038_131825221_131825366_131830291
transcript_97886.nnic	chrX	-	1511	3	NIC	ENSG00000213468.7	novel	1805	4	NA	NA	-10	-307	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	87	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	NA	False	NA	NA	False	AATAAA	-28	NA	131830683	131795356	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_131796332_131825221_131825366_131830291
transcript_97888.known	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131825366_131830291
transcript_97890.known	chrX	-	1240	3	FSM	ENSG00000213468.7	ENST00000668308.1	1240	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	91	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCGCTGTCTTGGCCTT	NA	False	NA	-12	True	NA	NA	NA	131830673	131793752	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131794467_131825221_131825366_131830291
transcript_97892.known	chrX	+	3251	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_1	37.6100039443526	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_97893.nic	chrX	+	3066	11	NIC	ENSG00000134602.16	novel	3251	12	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_6	142.986048270452	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016424	True	NA	31	True	AATAAA	-19	NA	132023300	132075943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_97895.known	chrX	+	3017	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	138.344352974742	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016428	True	NA	31	True	AATAAA	-19	NA	132023304	132075943	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_97896.nic	chrX	-	2957	3	ISM	ENSG00000123728.10	ENST00000342983.6	3896	4	762	286	762	-286	3prime_fragment	FALSE	canonical	3	137	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTCTTGTCTTTATTA	NA	False	NA	NA	False	AATAAA	-17	NA	132217362	132203310	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_132205588_132214133_132214447_132216995
transcript_97898.known	chrX	-	11263	8	FSM	ENSG00000076770.15	ENST00000394311.6	11263	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	2.32992949004287	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTCAGTCCTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	132413608	132369316	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413582
transcript_97899.known	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	35.3466795484674	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133985594	133535744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
transcript_97900.nnic	chrX	-	903	3	NNC	ENSG00000147257.16	novel	1188	6	NA	NA	22178	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133639908	133535744	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_133536294_133596439_133596600_133639714
transcript_97902.known	chrX	+	4434	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	91.1276028434854	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTCTTTTTTGTG	134366638	True	NA	15	True	AATAAA	-18	NA	134373311	134428791	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
transcript_97903.known	chrX	+	4759	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	61.2553852507861	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	134366638	True	NA	13	True	AATAAA	-16	NA	134373311	134428789	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
transcript_97905.known	chrX	+	1150	8	FSM	ENSG00000156531.18	ENST00000370800.4	1150	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	101.921137981024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTCTATGTAACTT	134366699	True	NA	NA	False	AATAAA	-21	NA	134373372	134415292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015
transcript_97906.nic	chrX	+	698	6	ISM	ENSG00000156531.18	ENST00000691812.1	3892	11	-39	15224	0	-1748	5prime_fragment	FALSE	canonical	3	173	junction_5	78.0820081708968	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAGAAAAGTCGCAAA	134366614	True	NA	14	True	AAGAAA	-40	NA	134373287	134413544	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490
transcript_9791.known	chr1	+	1108	9	FSM	ENSG00000162769.13	ENST00000419102.1	1108	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	143.409324574799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCCTTGGAGAGAGAT	212858904	False	NA	-60	True	NA	NA	NA	212858915	212895334	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212859191_212863724_212863870_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_97910.known	chrX	+	1395	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	35.0158446278253	560	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	134454409	True	NA	30	True	AATAAA	-16	NA	134460164	134500668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
transcript_97914.known	chrX	-	333	3	FSM	ENSG00000170965.10	ENST00000473897.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTGCCCCCCAAACC	NA	False	NA	NA	False	NA	NA	NA	134764263	134566509	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134566741_134602050_134602123_134764233
transcript_97918.nic	chrX	-	2846	11	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	50.4535429875841	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	NA	False	NA	-17	True	AATAAA	-25	NA	134797284	134769565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_134771355_134772142_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_97920.known	chrX	-	1078	11	FSM	ENSG00000156504.17	ENST00000493333.5	1078	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	43.9796543870004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCAGAGAACTTTGATCC	NA	False	NA	NA	False	CATAAA	-14	NA	134797187	134772078	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_97921.known	chrX	-	1059	11	FSM	ENSG00000156504.17	ENST00000611027.2	1059	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	45.5487650765638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATGTTTAGTGG	NA	False	NA	NA	False	NA	NA	NA	134797187	134772100	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_97925.nic	chrX	-	3577	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	38	junction_9	40.8849635797023	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	NA	False	NA	-17	True	AATAAA	-25	NA	134797227	134769565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_97926.nic	chrX	-	1563	10	NIC	ENSG00000156504.17	novel	1078	11	NA	NA	-52	-60	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	38.4447655734822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGTACATTATTTTG	NA	False	NA	-8	True	ATTAAA	-20	NA	134797284	134771633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_97928.nic	chrX	-	1566	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-52	-60	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	40.8849635797023	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGTACATTATTTTG	NA	False	NA	-8	True	ATTAAA	-20	NA	134797284	134771633	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_97930.known	chrX	+	665	3	FSM	ENSG00000156500.16	ENST00000482240.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATTCACTACATA	134806848	True	NA	NA	False	NA	NA	NA	134807216	134809557	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134807342_134807539_134807709_134809186
transcript_97931.known	chrX	-	4377	10	FSM	ENSG00000156504.17	ENST00000343004.10	4377	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	42.0214524872214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	NA	False	NA	-17	True	AATAAA	-25	NA	134797205	134769565	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107
transcript_97932.known	chrX	+	2483	2	FSM	ENSG00000156500.16	ENST00000475361.1	2483	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAACCTCTTGGTTCT	134806854	True	NA	NA	False	AATAAA	-17	NA	134807222	134811183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134807709_134809186
transcript_97933.nnic	chrX	-	2466	7	NNC	ENSG00000101928.13	novel	2348	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.085433732157	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	NA	False	NA	-11	True	AATAAA	-18	NA	134915257	134887631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_134889193_134891478_134891641_134892766_134892885_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_97934.nnic	chrX	-	2461	7	NNC	ENSG00000101928.13	novel	2348	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	63.1332365363566	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	NA	False	NA	-11	True	AATAAA	-18	NA	134915248	134887631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134904736_134904859_134915181
transcript_97941.known	chrX	-	2348	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	33.956442687655	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	NA	False	NA	-11	True	AATAAA	-18	NA	134915257	134887631	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_97947.known	chrX	-	924	5	FSM	ENSG00000101928.13	ENST00000491609.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	51.0954988232819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTAGGAAATTATTTGA	NA	False	NA	NA	False	NA	NA	NA	134915231	134888953	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899279_134899535_134915181
transcript_97948.known	chrX	-	773	5	FSM	ENSG00000101928.13	ENST00000370779.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	43.6828055417689	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAATTTGAAGGACT	NA	False	NA	98	True	AATATA	-12	NA	134915227	134889014	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134889193_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_97953.nic	chrX	-	1152	4	ISM	ENSG00000101928.13	ENST00000370779.8	773	5	-93	7338	-63	536	5prime_fragment	FALSE	canonical	3	141	junction_1	18.7320284243028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTAAAGTTGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	134915320	134896352	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_134897035_134899089_134899166_134899279_134899535_134915181
transcript_97954.known	chrX	+	1483	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	134990885	True	NA	NA	False	ATTAAA	-21	NA	134990990	134992473	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134991000_134992500
transcript_97955.known	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135020500_135022500
transcript_97956.known	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027961	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135032400_135033500
transcript_97957.known	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027988	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135032576_135033124
transcript_97958.known	chrX	-	536	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGATGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	135052141	135051057	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135051369_135051916
transcript_97959.known	chrX	-	1204	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	NA	False	NA	NA	False	AATAAA	-24	NA	135052135	135050931	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135050900_135052100
transcript_97962.known	chrX	+	4034	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.81909084849293	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTAATATTCTTTGTTA	135344020	True	NA	NA	False	AATATA	-28	NA	135344795	135363413	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
transcript_97964.known	chrX	-	5145	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTTTTTTTTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	135973988	135960587	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
transcript_97966.known	chrX	+	2441	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	16.9156403629567	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	136145892	True	NA	15	True	AATAAA	-21	NA	136147464	136211359	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
transcript_97968.known	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	16.1563540991703	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	136251400	136216813	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_97971.nic	chrX	-	1755	10	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-27	13635	-27	-64	5prime_fragment	FALSE	canonical	3	95	junction_1	6.22618921160973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGTTTCTAAAACCAC	NA	False	NA	NA	False	AAAAAG	-7	NA	136251427	136230448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_97972.nic	chrX	-	420	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-45	25071	-27	-14313	5prime_fragment	FALSE	canonical	3	97	junction_1	8.33999733546454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACAACGGAG	NA	False	NA	-67	True	AAAACA	-38	NA	136251427	136244697	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_97974.known	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	147.452775449139	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	136497040	False	NA	59	True	AATAAA	-27	NA	136497078	136512342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_97975.known	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_6	65.9941995557185	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	136494566	False	NA	63	True	AATAAA	-31	NA	136497591	136512346	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_97977.known	chrX	+	1014	6	FSM	ENSG00000102241.12	ENST00000448450.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	191.846813890666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	136489789	True	NA	NA	False	NA	NA	NA	136497220	136502941	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_97979.nnic	chrX	+	1413	6	NNC	ENSG00000102241.12	novel	2694	9	NA	NA	-75	2088	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	266.1074970759	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGAGGAATATTGTCAT	136497291	False	NA	NA	False	AATAAA	-21	NA	136497516	136505029	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504518
transcript_9798.nnic	chr1	+	1393	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	221	2811	intron_retention	FALSE	canonical	3	25	junction_3	15.5134350376268	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCTTTCTCATGTTTA	212916973	True	NA	12	True	AATAAA	-19	NA	212917007	212920388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
transcript_97980.nic	chrX	+	1488	5	ISM	ENSG00000102241.12	ENST00000448450.5	1014	6	296	-586	-75	586	3prime_fragment	FALSE	canonical	3	558	junction_4	77.170266294733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTGATGTCTCATT	136497291	False	NA	NA	False	ATTAAA	-14	NA	136497516	136503527	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_9799.nnic	chr1	+	1593	3	NNC	ENSG00000282718.1	novel	554	3	NA	NA	356	1948	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGAGTGTGCCTGTGC	212916905	True	NA	NA	False	AATAAA	-34	NA	212917142	212919525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212917201_212917359_212917705_212918335
transcript_97995.known	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_8	205.541358368577	2046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	NA	False	NA	-19	True	AATAAA	-19	NA	136880725	136873460	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_98000.known	chrX	-	1852	8	FSM	ENSG00000147274.14	ENST00000464781.5	1852	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	1350.67907334928	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTGCTCTTACTG	NA	False	NA	-7	True	AATAAA	-31	NA	136880725	136873448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
transcript_98003.known	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_7	218.96248863349	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	NA	False	NA	-4	True	AGTAAA	-16	NA	136880725	136873957	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_9801.nic	chr1	+	222	2	ISM	ENSG00000282718.1	ENST00000632866.1	554	3	358	52	358	-52	3prime_fragment	FALSE	canonical	3	51	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTTTTTTCTTTTTTT	212916907	True	NA	7	True	TATAAA	-22	NA	212917144	212917525	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_212917201_212917359
transcript_98011.known	chrX	-	563	2	FSM	ENSG00000147274.14	ENST00000565907.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTGTCTACACGATG	NA	False	NA	NA	False	NA	NA	NA	136880722	136879016	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136879454_136880596
transcript_98012.known	chrX	-	78	1	FSM	ENSG00000214748.2	ENST00000442158.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	137325049	137324971	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_137325000_137325000
transcript_98013.known	chrX	-	304	3	FSM	ENSG00000224765.2	ENST00000456631.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGGACCTGGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	137563925	137556190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_137556305_137561043_137561198_137563889
transcript_98015.known	chrX	-	586	2	FSM	ENSG00000224765.2	ENST00000442841.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCACTTGGTTTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	137564387	137560668	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_137561198_137564330
transcript_98016.known	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	7	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	137562330	True	NA	-16	True	AATAAA	-31	NA	137566126	137572102	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_137567752_137568901_137569066_137569890
transcript_98024.nnic	chrX	+	938	2	NIC	ENSG00000283692.2	novel	1366	5	NA	NA	0	-403690	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137573698	False	NA	11	True	AATAAA	-14	NA	137573751	137577691	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_137574120_137577121
transcript_98025.known	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_4	22.0340645365307	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	NA	False	NA	2	True	AATAAA	-25	NA	138711717	138614726	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
transcript_98029.known	chrX	+	849	3	FSM	ENSG00000226031.5	ENST00000438238.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	138711689	False	NA	NA	False	AAAAAG	-28	NA	138712106	138716617	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_138712143_138714723_138714810_138715890
transcript_98037.known	chrX	+	1497	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-263	0	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	140091376	True	NA	5	True	AATAAA	-16	NA	140091414	140092911	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_140091400_140092900
transcript_98038.known	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	140764321	True	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_140764699_140772077
transcript_98039.known	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	141177016	141175748	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_141176409_141176892
transcript_98041.known	chrX	-	7580	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	22.0535569693417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGTGTGCAATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	149505306	149476987	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_98042.known	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	32.7014946921703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	NA	False	NA	-2	True	AATAAA	-26	NA	149505347	149487130	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_98043.known	chrX	+	1204	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	29.0807066626655	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540603	False	NA	NA	False	AATAAA	-15	NA	149540629	149547309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_98044.nic	chrX	+	1277	5	NIC	ENSG00000197620.11	novel	1204	5	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	30.3685692781204	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149540575	149547309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_149540800_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_98045.known	chrX	+	1403	5	FSM	ENSG00000197620.11	ENST00000423421.5	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.8374738006393	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540900	True	NA	NA	False	AATAAA	-15	NA	149540974	149547309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_98046.known	chrX	+	2407	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	28.3670142947755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTGCAGTGTTTCTGA	149540937	True	NA	NA	False	ATTAAA	-42	NA	149541011	149548331	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_98047.nic	chrX	+	1471	5	NIC	ENSG00000197620.11	novel	1403	5	NA	NA	-119	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	30.1858824618397	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540802	True	NA	NA	False	AATAAA	-15	NA	149540855	149547309	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_149541293_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_98048.known	chrX	+	1208	5	FSM	ENSG00000197620.11	ENST00000423540.6	1208	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.372758884102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTGTGTGATGCCTC	149540908	True	NA	NA	False	NA	NA	NA	149540982	149547154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149541293_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_98050.known	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	25.9020591202064	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631792	149596555	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_98051.known	chrX	-	2662	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	61.6038959806926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631912	149596556	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
transcript_98052.known	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.6487105081727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	149631698	149603708	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
transcript_98057.nic	chrX	-	1626	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	98	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	84.3317259398858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938602	149929526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_98059.nic	chrX	-	1537	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.8653201316856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938481	149929526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_9806.nnic	chr1	+	903	7	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	-11	-1753	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_6	494.188110833202	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTACATTTTGTTCATC	212922127	True	NA	8	True	AATAAA	-15	NA	212950582	212971165	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212971037
transcript_98060.known	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	66.9883571973518	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938435	149929526	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_98062.known	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	96.5538191890927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	149938472	149932578	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
transcript_98068.known	chrX	-	1316	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	81.567073626556	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	149938459	149932200	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_98070.nic	chrX	-	1482	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	73.1688970806585	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938589	149932196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_98071.known	chrX	-	1333	5	FSM	ENSG00000197021.9	ENST00000370406.8	1333	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	41.4397152499869	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938491	149932196	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_98073.known	chrX	+	3412	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_10	10.1882785792382	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	150567439	True	NA	10	True	AATAAA	-20	NA	150568620	150673143	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
transcript_98075.nnic	chrX	-	963	2	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	-44	-82299	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTTGAATTTTCTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	150898712	150897198	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_150897971_150898521
transcript_98076.nnic	chrX	-	438	2	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	-44	-82824	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCTTAAACATGTACC	NA	False	NA	NA	False	AATAAA	-20	NA	150898712	150897723	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_150897971_150898521
transcript_9808.known	chr1	+	1206	7	FSM	ENSG00000143494.16	ENST00000366967.6	1206	7	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	391.438657036096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGAACTTTTG	212922211	False	NA	NA	False	AGTAAA	-10	NA	212950666	212988924	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212950741_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_98081.known	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	1819.00403724126	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	150918552	False	NA	6	True	AATAAA	-18	NA	150983405	150987932	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_98083.known	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3732	junction_1	426.780974271347	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	150918481	True	NA	40	True	AATAAA	-26	NA	150983334	150990771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_98084.known	chrX	+	2020	2	FSM	ENSG00000102195.10	ENST00000218316.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCTTTCTAGTTTGTT	151175542	True	NA	NA	False	NA	NA	NA	151176583	151181465	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151176909_151179770
transcript_98085.known	chrX	+	4715	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_2	3.5	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	151392726	True	NA	17	True	ATTAAA	-20	NA	151397205	151409364	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151397362_151403630_151403741_151404915
transcript_98086.known	chrX	+	735	3	FSM	ENSG00000147381.12	ENST00000431963.6	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCTATGATGGCCTG	151912464	True	NA	NA	False	NA	NA	NA	151912494	151924214	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151912543_151923452_151923525_151923599
transcript_98087.known	chrX	+	914	3	FSM	ENSG00000147381.12	ENST00000448295.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	14.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAGGAAATCTGGGA	151913395	False	NA	NA	False	NA	NA	NA	151913462	151924315	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151913589_151923452_151923525_151923599
transcript_98088.known	chrX	+	990	3	FSM	ENSG00000147381.12	ENST00000441865.5	990	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGAAACTGCTCACC	151914762	False	NA	NA	False	NA	NA	NA	151914829	151924388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151914959_151923452_151923525_151923599
transcript_98089.known	chrX	+	1767	3	FSM	ENSG00000147381.12	ENST00000684668.1	1767	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	13.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	151916127	False	NA	18	True	AATAAA	-15	NA	151916194	151925168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151916321_151923452_151923525_151923599
transcript_98090.known	chrX	+	1770	3	FSM	ENSG00000147381.12	ENST00000393920.6	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	26.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	151916806	False	NA	18	True	AATAAA	-15	NA	151916873	151925168	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151917003_151923452_151923525_151923599
transcript_98091.known	chrX	+	1773	3	FSM	ENSG00000147381.12	ENST00000360243.6	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	33	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151918159	False	NA	20	True	AATAAA	-17	NA	151918226	151925170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151918357_151923452_151923525_151923599
transcript_98092.known	chrX	+	997	3	FSM	ENSG00000147381.12	ENST00000431971.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	31	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGAAACTGCTCACC	151918834	False	NA	NA	False	NA	NA	NA	151918901	151924388	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151919038_151923452_151923525_151923599
transcript_98093.known	chrX	+	686	3	FSM	ENSG00000147381.12	ENST00000425182.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	31.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCAACACCTACACCCT	151919652	False	NA	NA	False	NA	NA	NA	151919689	151924180	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151919723_151923452_151923525_151923599
transcript_98094.known	chrX	+	1841	4	FSM	ENSG00000147381.12	ENST00000682265.1	1841	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.0819306696935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151912478	False	NA	16	True	AATAAA	-13	NA	151912508	151925166	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151912543_151912801_151912970_151923452_151923525_151923599
transcript_98095.known	chrX	+	1724	3	FSM	ENSG00000147381.12	ENST00000276344.6	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	42.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151912821	True	NA	20	True	AATAAA	-17	NA	151912888	151925170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151912970_151923452_151923525_151923599
transcript_98097.known	chrX	+	1682	3	FSM	ENSG00000221867.9	ENST00000370278.4	1682	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCGTTTCTTTTCCGT	152698637	True	NA	NA	False	AATAAA	-17	NA	152698793	152702347	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152698830_152700621_152700688_152700767
transcript_98100.nnic	chrX	-	640	4	NIC	ENSG00000268902.4	novel	789	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	50.7630661888039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152714573	152708260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_152708641_152709460_152709576_152713255_152713316_152714488
transcript_98102.known	chrX	-	789	5	FSM	ENSG00000268902.4	ENST00000598036.1	789	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.667204298278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152714549	152708260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152708641_152708834_152709008_152709460_152709576_152713255_152713316_152714488
transcript_98103.nnic	chrX	+	2174	7	NNC	ENSG00000183305.14	novel	750	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.4480841884036	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152714601	152718606	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_152714683_152714763_152714929_152715078_152715158_152715956_152716077_152716647_152716746_152716895_152716962_152717041
transcript_98109.known	chrX	+	1886	5	FSM	ENSG00000183305.14	ENST00000682532.1	1886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	62.5319918121916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714627	152718607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152714683_152715078_152715158_152715956_152716077_152716895_152716962_152717041
transcript_98111.known	chrX	+	1714	3	FSM	ENSG00000183305.14	ENST00000370293.6	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	91	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714600	152718607	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152714683_152716895_152716962_152717041
transcript_98112.nnic	chrX	-	719	4	NNC	ENSG00000198930.13	novel	875	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733744	152727483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_152727864_152728022_152728225_152732444_152732505_152733667
transcript_98113.nnic	chrX	-	726	4	NNC	ENSG00000198930.13	novel	630	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733744	152727483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_152727864_152728022_152728232_152732444_152732505_152733667
transcript_98114.known	chrX	-	645	4	FSM	ENSG00000198930.13	ENST00000452779.3	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733721	152727483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152727864_152728073_152728225_152732444_152732505_152733667
transcript_98115.known	chrX	-	630	4	FSM	ENSG00000198930.13	ENST00000361211.9	630	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733699	152727483	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152727864_152728073_152728232_152732444_152732505_152733667
transcript_98116.known	chrX	+	1664	2	FSM	ENSG00000213401.10	ENST00000357916.8	1664	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	152733717	True	NA	3	True	AATAAA	-4	NA	152733778	152737669	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152733860_152736086
transcript_98119.known	chrX	-	576	6	FSM	ENSG00000268606.6	ENST00000617505.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	64.8197500766549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTTCTTCCTCTTCTAC	NA	False	NA	NA	False	NA	NA	NA	152753840	152751252	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753541_152753624_152753787
transcript_98120.known	chrX	-	1947	5	FSM	ENSG00000268606.6	ENST00000620710.4	1947	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	66.5093978321861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753884	152749862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753787
transcript_98121.known	chrX	-	1886	5	FSM	ENSG00000268606.6	ENST00000684311.1	1886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	62.0664965984065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753842	152749862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753787
transcript_98122.known	chrX	-	1830	4	FSM	ENSG00000268606.6	ENST00000595583.5	1830	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	62.6578007912822	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	NA	False	NA	NA	False	AATAAA	-4	NA	152753878	152749875	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753787
transcript_98123.known	chrX	-	1728	3	FSM	ENSG00000268606.6	ENST00000611674.4	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	91.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152751429_152751508_152751575_152753787
transcript_98124.known	chrX	-	1662	2	FSM	ENSG00000268606.6	ENST00000598543.5	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152751429_152753787
transcript_98128.nnic	chrX	+	791	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.4738029877767	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753893	152760219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759634_152759842
transcript_98129.nnic	chrX	+	842	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	31.767711595266	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753893	152760219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759685_152759842
transcript_98131.nnic	chrX	+	750	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.5036763570118	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753963	152760219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_152754011_152755154_152755215_152758906_152759022_152759482_152759634_152759842
transcript_98132.nnic	chrX	+	801	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	47.2175814713121	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753963	152760219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_152754011_152755154_152755215_152758906_152759022_152759482_152759685_152759842
transcript_98135.nic	chrX	+	1252	4	NIC	ENSG00000268916.6	novel	789	5	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_3	58.7896438347965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753893	152760219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_152753982_152755154_152755215_152758906_152759634_152759842
transcript_98136.nic	chrX	+	1303	4	NIC	ENSG00000268916.6	novel	789	5	NA	NA	-27	0	intron_retention	FALSE	canonical	3	63	junction_3	36.4447831962576	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753893	152760219	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_152753982_152755154_152755215_152758906_152759685_152759842
transcript_9814.nnic	chr1	+	712	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	-11	474	at_least_one_novel_splicesite	FALSE	canonical	3	273	junction_2	96.2923788376953	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACTTCTCAGTGTGAA	212922127	True	NA	-11	True	AATGAA	-15	NA	212950582	212952286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212952128
transcript_98143.known	chrX	+	789	5	FSM	ENSG00000268916.6	ENST00000617158.4	789	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9380332738623	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152753920	152760222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152753982_152755154_152755215_152758906_152759022_152759475_152759649_152759842
transcript_98144.known	chrX	-	1740	3	FSM	ENSG00000197172.11	ENST00000329342.10	1682	3	-58	0	-31	0	multi-exon	FALSE	canonical	0	0	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCGTTTCTTTTCCGT	NA	False	NA	NA	False	AATAAA	-17	NA	152769747	152766135	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152767716_152767795_152767862_152769653
transcript_98146.known	chrX	-	1413	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	26.9478663348325	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGAATTTATTTGC	NA	False	NA	2	True	NA	NA	NA	152830757	152826993	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
transcript_9815.nnic	chr1	+	1165	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	-11	249	at_least_one_novel_splicesite	FALSE	canonical	3	233	junction_3	121.312269233852	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGTTCTGACTTGAG	212922127	True	NA	6	True	NA	NA	NA	212950582	212953040	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212952429
transcript_98152.known	chrX	+	1630	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	123.628918037003	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	152825846	True	NA	30	True	NA	NA	NA	152830966	152869363	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_98156.known	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	35.7879240834682	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	152825942	True	NA	NA	False	NA	NA	NA	152831062	152869729	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_9816.nnic	chr1	+	1728	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	-11	812	at_least_one_novel_splicesite	FALSE	canonical	3	233	junction_3	121.312269233852	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTGGTTGTATGA	212922127	True	NA	13	True	AGTAAA	-16	NA	212950582	212953603	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212952429
transcript_98160.nic	chrX	-	1515	11	ISM	ENSG00000183479.13	ENST00000330912.7	2509	13	-21	3195	-21	-2948	5prime_fragment	FALSE	canonical	3	49	junction_2	211.872343641165	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153470608	153447667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_98166.known	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	40.964603811487	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153470576	153447667	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_9817.nnic	chr1	+	757	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	-11	474	at_least_one_novel_splicesite	FALSE	canonical	3	373	junction_3	154.640083922493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACTTCTCAGTGTGAA	212922127	True	NA	-11	True	AATGAA	-15	NA	212950582	212952286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212950741_212951181_212951393_212951588_212951819_212952128
transcript_98174.known	chrX	+	2353	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	3.18157963590287	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	153494803	True	NA	8	True	ATTAAA	-19	NA	153494979	153509546	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
transcript_98176.known	chrX	+	554	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	153599177	True	NA	18	True	AATAAA	-30	NA	153599339	153599893	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153599300_153599900
transcript_98177.known	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	6.96745682049444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153673813	153669732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
transcript_98178.known	chrX	-	1585	12	FSM	ENSG00000130822.16	ENST00000447676.6	1585	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	8.160578491891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTGTGGCGCATGGCG	NA	False	NA	NA	False	GGGGCT	-24	NA	153674361	153670019	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673928
transcript_98179.nic	chrX	-	1717	12	NIC	ENSG00000130822.16	novel	1473	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	6.57945713553536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153686778	153669732	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153686500
transcript_9819.nnic	chr1	+	599	4	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	-10	474	at_least_one_novel_splicesite	FALSE	canonical	3	373	junction_3	555.950237581266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACTTCTCAGTGTGAA	212922128	True	NA	-11	True	AATGAA	-15	NA	212950583	212952286	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212952128
transcript_98202.known	chrX	-	1350	8	FSM	ENSG00000185825.17	ENST00000672675.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	999.452829894274	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGCGGTGTGTGA	NA	False	NA	-9	True	AATAAA	-15	NA	153724388	153700499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724260
transcript_98203.known	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	183.439697036873	3648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724387	153700491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_98206.known	chrX	-	1175	8	FSM	ENSG00000185825.17	ENST00000645377.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1009.72992954168	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGCGGTGTGTGACTG	NA	False	NA	-6	True	AATAAA	-18	NA	153724388	153700496	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153703039_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_98214.known	chrX	-	573	4	FSM	ENSG00000185825.17	ENST00000645802.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	2816	junction_3	132.476412994918	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCCTGTCTGTGTTAG	NA	False	NA	NA	False	NA	NA	NA	153724396	153715416	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153715690_153720871_153720973_153723152_153723289_153724333
transcript_98215.known	chrX	-	1789	8	FSM	ENSG00000185825.17	ENST00000458587.8	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	981.915100864694	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724066	153700491	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507
transcript_98219.known	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_12	27.0630693422276	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	NA	False	NA	-34	True	AATAAA	-15	NA	153794375	153785767	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_98222.known	chrX	-	1712	12	FSM	ENSG00000067829.20	ENST00000370092.7	1712	12	0	0	0	0	multi-exon	TRUE	canonical	3	312	junction_11	24.9670857710872	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	NA	False	NA	-32	True	AATAAA	-17	NA	153794512	153785765	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_98237.known	chrX	+	745	7	FSM	ENSG00000180879.14	ENST00000370087.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	805.675010300197	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153793926	False	NA	44	True	AATAAA	-27	NA	153794190	153798498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794335_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98241.known	chrX	+	1671	7	FSM	ENSG00000180879.14	ENST00000320857.7	1671	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	787.357394495452	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	NA	False	NA	44	True	AATAAA	-27	NA	153793515	153798498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794586_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98251.known	chrX	+	608	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	2000	junction_1	160.068735235835	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	153775859	True	NA	45	True	AATAAA	-28	NA	153794667	153798499	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98254.known	chrX	+	526	5	FSM	ENSG00000180879.14	ENST00000370085.3	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	867.621569291589	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153775865	True	NA	44	True	AATAAA	-27	NA	153794673	153798498	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794755_153796433_153796553_153797724_153797815_153798070_153798137_153798328
transcript_98255.known	chrX	+	785	7	FSM	ENSG00000180879.14	ENST00000471880.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	998.602092371576	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153775870	True	NA	39	True	AATAAA	-22	NA	153794678	153798493	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794755_153795662_153795862_153796438_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98256.nnic	chrX	-	435	3	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153844790	153841260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrX_-_153841480_153843961_153844098_153844710
transcript_98259.nnic	chrX	-	338	2	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153844829	153841260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrX_-_153841480_153844710
transcript_9826.nic	chr1	-	2196	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	67.5248796740875	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-213015090	False	NA	9	True	AATATA	-26	NA	213015533	212994728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
transcript_98262.known	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	43.4111807285277	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	NA	False	NA	-4	True	NA	NA	NA	153935037	153929224	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_98263.nic	chrX	-	885	8	NIC	ENSG00000102030.16	novel	1603	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	190.290325984442	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	NA	False	NA	-16	True	AATAAA	-18	NA	153935038	153929925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933960_153934002_153934376_153934476_153934883
transcript_98267.known	chrX	-	1080	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	39.7425744287184	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	NA	False	NA	-16	True	AATAAA	-18	NA	153935015	153929925	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_98268.known	chrX	-	837	7	FSM	ENSG00000102030.16	ENST00000370009.5	837	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	219.155766522353	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGTGTGTGAGCGCG	NA	False	NA	-14	True	AATAAA	-20	NA	153935015	153929923	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_98269.known	chrX	-	538	7	FSM	ENSG00000102030.16	ENST00000370011.7	538	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	270.869228390544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAAGGGCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	153935015	153930204	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933960_153934002_153934376_153934476_153934883
transcript_98270.known	chrX	-	1002	8	FSM	ENSG00000102030.16	ENST00000370015.8	1002	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	198.630926338169	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGCGCGCACATTTA	NA	False	NA	-4	True	AATAAA	-30	NA	153935041	153929913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930308_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_98271.known	chrX	-	1304	11	FSM	ENSG00000102032.13	ENST00000423624.5	1304	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.74699879903904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGTCCGCTCCACCT	NA	False	NA	-17	True	NA	NA	NA	153944626	153935285	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_98272.nic	chrX	-	1404	6	ISM	ENSG00000102032.13	ENST00000393700.8	1334	11	-67	6969	-23	7	5prime_fragment	FALSE	canonical	2	2	junction_1	3.00665927567458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAACAACTTGCTA	NA	False	NA	NA	False	NA	NA	NA	153944710	153942237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
transcript_98273.known	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	153972507	True	NA	6	True	NA	NA	NA	153972753	153983194	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153972861_153981849
transcript_98274.known	chrX	-	10467	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	23.4568161143456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	NA	False	NA	-3	True	GATAAA	-18	NA	154097717	154021572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
transcript_98275.known	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	33	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	NA	False	NA	-3	True	GATAAA	-18	NA	154097717	154021572	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154031451_154032206_154032558_154097603
transcript_98276.known	chrX	-	2558	1	FSM	ENSG00000169057.24	ENST00000629277.1	2558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAGTTTAATAGGC	NA	False	NA	NA	False	NA	NA	NA	154097523	154094965	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154095000_154097500
transcript_98278.known	chrX	+	1114	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	101.286524276431	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTTGGGGCTCCAGGA	154367874	False	NA	69	True	NA	NA	NA	154379508	154381574	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_98279.known	chrX	+	798	6	FSM	ENSG00000102119.12	ENST00000684082.1	798	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.605815976428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGGGCAGGGGCAGG	154367850	False	NA	NA	False	NA	NA	NA	154379484	154381273	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380276_154380368_154380752_154380803_154380881
transcript_9828.known	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	74.5334446741864	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213015424	False	NA	NA	False	AATAAA	-15	NA	213015867	212992181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_98280.known	chrX	+	501	5	FSM	ENSG00000102119.12	ENST00000468294.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_4	15.3195136998535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCCGGGACAGTGCCTA	154367890	False	NA	NA	False	NA	NA	NA	154379524	154380894	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752
transcript_98281.known	chrX	+	1281	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	17.1227188261678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	154367874	False	NA	18	True	AATAAA	-19	NA	154379508	154381523	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
transcript_98282.known	chrX	+	1284	4	FSM	ENSG00000102119.12	ENST00000486738.5	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_3	13.4412301024373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGGCAGGGGCTTT	154367706	True	NA	NA	False	NA	NA	NA	154379340	154381279	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752
transcript_98284.known	chrX	-	3008	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	17.7979052727776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	NA	False	NA	NA	False	AATAAA	-26	NA	154412090	154401237	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
transcript_98285.known	chrX	-	2249	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	17.5779513880315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGGCTGTAAACTG	NA	False	NA	NA	False	AATAAA	-20	NA	154412112	154401760	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
transcript_98286.known	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	6.5121550400237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	NA	False	NA	NA	False	AATAAA	-28	NA	154409254	154401235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
transcript_98299.known	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	399.40103592755	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154398416	True	NA	26	True	AATAAA	-17	NA	154398496	154400913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
transcript_98300.known	chrX	+	585	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	6777.10345206564	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	154149298	True	NA	30	True	AATAAA	-21	NA	154398377	154400917	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
transcript_98301.known	chrX	+	1369	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	0	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_4	455.263934438036	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154149297	True	NA	26	True	AATAAA	-17	NA	154398376	154400913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
transcript_98302.known	chrX	+	1731	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154149308	True	NA	26	True	AATAAA	-17	NA	154398387	154400913	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337
transcript_98303.known	chrX	-	598	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	2	33	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGCACTTTGTT	NA	False	NA	4	True	AATAAA	-21	NA	154428479	154424379	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154424626_154428127
transcript_98304.known	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	1	185	junction_7	121.93714227694	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	154418953	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_98306.known	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	86.5632716572104	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154428250	True	NA	16	True	AATAAA	-17	NA	154437153	154443467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_98308.nic	chrX	+	2481	10	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	934	junction_5	59.452024438841	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154428244	True	NA	16	True	AATAAA	-17	NA	154437147	154443467	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_98315.known	chrX	+	1337	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	45.0555213042752	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440356	True	NA	37	True	NA	NA	NA	154444140	154450654	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_98316.known	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1702	junction_1	76.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	NA	False	NA	-4	True	AATAAA	-19	NA	154479257	154477768	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154478059_154478282_154478412_154478727
transcript_98317.known	chrX	-	2327	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	17.7826382244655	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	NA	False	NA	-4	True	AATAAA	-22	NA	154486615	154483716	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
transcript_98319.known	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	51.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	NA	False	NA	-38	True	NA	NA	NA	154490663	154487342	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154489083_154490306_154490359_154490593
transcript_98320.known	chrX	-	1815	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	34.0293990543471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	NA	False	NA	0	True	AATAAA	-29	NA	154516242	154506159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_98324.known	chrX	-	1712	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_9	20.418461750262	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154516236	154506158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_98325.known	chrX	-	1359	10	FSM	ENSG00000071889.17	ENST00000369641.7	1359	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	31.3514526018638	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCATTCCTCACGCC	NA	False	NA	NA	False	NA	NA	NA	154516238	154506534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_98326.known	chrX	-	1041	9	FSM	ENSG00000071889.17	ENST00000393572.5	1041	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	34.4564943080401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGGGCTGCAGGGGG	NA	False	NA	NA	False	GGGGCT	-40	NA	154516160	154506639	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154515759_154515813_154515909
transcript_9833.known	chr1	-	4323	8	FSM	ENSG00000174606.14	ENST00000360506.6	4323	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	92.5969982323005	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213015383	False	NA	NA	False	AATAAA	-15	NA	213015826	212992181	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213015612
transcript_98332.known	chrX	-	1793	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	11.1908165475089	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516232	154506170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_98333.known	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	33.4313374094973	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516242	154506170	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_98334.known	chrX	-	1763	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	30.1587635755872	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	NA	False	NA	0	True	AATAAA	-29	NA	154516242	154506159	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_98335.known	chrX	-	2223	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	7.77951369516973	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCCCCTTGTCATT	NA	False	NA	-7	True	ATTAAA	-14	NA	154546846	154531390	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
transcript_98336.known	chrX	-	1661	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	15.7762127549323	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	NA	False	NA	NA	False	NA	NA	NA	154547572	154531999	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_98339.known	chrX	+	1973	10	FSM	ENSG00000269335.7	ENST00000594239.6	1973	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	16.7663684532791	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCATTAGTCGTGC	154546311	True	NA	NA	False	AGTAAA	-3	NA	154547619	154565033	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558531_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
transcript_9835.nnic	chr1	-	1953	8	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	102.813085802562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-213015361	False	NA	9	True	AATATA	-26	NA	213015804	212994728	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_98354.known	chrX	+	2469	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	74.0279869856182	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	154751495	True	NA	24	True	ATTAAA	-36	NA	154762863	154777689	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
transcript_98362.nic	chrX	+	1528	14	ISM	ENSG00000130826.18	ENST00000369550.10	2469	15	-14	1429	-2	0	5prime_fragment	FALSE	canonical	3	1038	junction_7	76.1205055221439	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGTAAGAAGGACAAGA	154751481	True	NA	28	True	NA	NA	NA	154762849	154776260	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186
transcript_98363.known	chrX	+	3079	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	76.6275863005518	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	154762543	True	NA	23	True	ATTAAA	-35	NA	154762741	154777688	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
transcript_9839.nic	chr1	-	1413	4	ISM	ENSG00000174606.14	ENST00000366962.8	4690	9	85	14357	44	0	5prime_fragment	FALSE	canonical	3	76	junction_3	52.8667087011182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTCCCATATACTTG	-213014434	True	NA	NA	False	AATAAA	-20	NA	213015782	213006538	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_213007199_213008209_213008467_213013092_213013419_213015612
transcript_98400.known	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.4490160628148	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805485	154778683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_98405.nnic	chrX	-	1413	7	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	32.8654665095277	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805467	154778683	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154805271
transcript_98406.known	chrX	+	6297	5	FSM	ENSG00000165775.18	ENST00000369498.8	6297	5	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	20.6926919466753	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGTTATTATTAACAC	155024646	True	NA	NA	False	ATTAAA	-15	NA	155026843	155060304	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155027072_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_98408.known	chrX	+	871	5	FSM	ENSG00000165775.18	ENST00000456179.1	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	247.51717112152	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGGTATCTTGGT	155033292	False	NA	-3	True	AATACA	-17	NA	155033425	155055106	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155033554_155046508_155046585_155047368_155047392_155051669_155051802_155054594
transcript_98410.known	chrX	+	2846	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	114.665377339154	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	155067456	True	NA	20	True	AATAAA	-23	NA	155071502	155123074	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_98412.known	chrX	+	2769	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.9946021071747	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTCAATGTCTTGG	155067461	True	NA	23	True	AATAAA	-26	NA	155071507	155123077	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_98426.known	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	26	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071136	155061621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155061992_155063965_155064034_155070693
transcript_98427.nnic	chrX	-	619	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071129	155061621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_155061992_155063965_155064034_155070948
transcript_98428.nnic	chrX	-	643	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071168	155061621	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_155061992_155063965_155064034_155070963
transcript_98431.known	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_3	40.7057735462674	714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	155211594	True	NA	34	True	ATTAAA	-43	NA	155216459	155239841	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
transcript_98435.known	chrX	-	3413	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAGTGTGTGTTATA	NA	False	NA	-6	True	AGTAAA	-23	NA	155264491	155258234	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155261230_155264073
transcript_9844.nic	chr1	-	1193	4	ISM	ENSG00000174606.14	ENST00000366962.8	4690	9	-5	14667	-5	-310	5prime_fragment	FALSE	canonical	3	76	junction_3	52.8667087011182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGGCATATTTTGGC	NA	False	NA	-10	True	ATTAAA	-19	NA	213015872	213006848	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_213007199_213008209_213008467_213013092_213013419_213015612
transcript_98443.known	chrX	-	3952	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	30.6007869713396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGAAGTTACCACAT	NA	False	NA	NA	False	AATAAA	-24	NA	155612952	155489010	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_9845.known	chr1	-	851	3	FSM	ENSG00000174606.14	ENST00000481918.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGCAAAATATTATTG	-213013207	True	NA	NA	False	ATTAAA	-16	NA	213015493	213008209	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_213008467_213013092_213013419_213015225
transcript_98450.nnic	chrX	-	1596	7	Fusion	ENSG00000277745.1_ENSG00000185973.12	novel	544	2	NA	NA	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	41.8608807042247	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCGCTTCAGTCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	155612972	155459414	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_-_155459834_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_98454.nic	chrX	-	1704	7	ISM	ENSG00000185973.12	ENST00000334398.8	3952	8	-20	2958	-20	-520	5prime_fragment	FALSE	canonical	3	44	junction_1	27.0287912337114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTATCTGATTTACTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	155612972	155491968	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_98455.known	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	32.5819479671387	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_98459.nic	chrX	-	725	3	ISM	ENSG00000185973.12	ENST00000369439.4	1248	7	-95	31736	-20	0	5prime_fragment	FALSE	canonical	3	109	junction_1	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	155612972	155524270	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_155524633_155545095_155545278_155612791
transcript_98462.known	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	23.7770254400232	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879010	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_98464.known	chrX	+	2496	7	FSM	ENSG00000124333.16	ENST00000262640.11	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	86.3249674196289	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879040	True	NA	NA	False	AATAAA	-21	NA	155881374	155943769	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155939700_155939794_155941882
transcript_98465.known	chrX	+	696	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	85.0588031893231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGGAAAGAAGAAGTT	155879025	True	NA	NA	False	NA	NA	NA	155881359	155941944	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_98467.known	chrY	-	828	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGGTATTTCATTT	NA	False	NA	-11	True	AATAAA	-17	NA	2787682	2786854	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_2786900_2787700
transcript_98476.known	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_1	324.254015652338	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	2827547	True	NA	8	True	ATTAAA	-19	NA	2841601	2867268	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_98479.known	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	692.813045970316	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	2841896	False	NA	-28	True	NA	NA	NA	2841919	2866862	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_98484.known	chrY	+	5113	8	FSM	ENSG00000067646.12	ENST00000383052.5	5113	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.43955232359516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	2935263	True	NA	25	True	AATAAA	-41	NA	2935280	2982506	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
transcript_98492.nnic	chrY	+	1036	7	NNC	ENSG00000114374.13	novel	2417	9	NA	NA	-76	-176	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	243.967210911631	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	NA	False	NA	NA	False	NA	NA	NA	12662257	12708693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325_12690442_12699416_12699641_12702009_12702056_12708633
transcript_98500.nnic	chrY	+	725	6	NNC	ENSG00000114374.13	novel	2417	9	NA	NA	17	-176	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	241.652146690237	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	12660315	True	NA	NA	False	NA	NA	NA	12662350	12708693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12707759_12707882_12708633
transcript_98503.nic	chrY	+	603	5	NIC	ENSG00000114374.13	novel	2417	9	NA	NA	17	-176	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	233.645564905478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	12660315	True	NA	NA	False	NA	NA	NA	12662350	12708693	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12708633
transcript_98505.known	chrY	+	5284	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	156.629073503825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692233	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
transcript_98506.nic	chrY	+	636	4	ISM	ENSG00000114374.13	ENST00000651177.1	9640	48	-110	158747	-76	-6814	5prime_fragment	FALSE	canonical	3	146	junction_3	189.195372271335	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCTAGCTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12662257	12702055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009
transcript_98507.nnic	chrY	+	446	3	NIC	ENSG00000114374.13	novel	2417	9	NA	NA	-14	-6814	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCTAGCTGAAGAA	12660318	True	NA	NA	False	NA	NA	NA	12662353	12702055	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12662707_12664639_12664687_12702009
transcript_98508.nic	chrY	+	403	2	ISM	ENSG00000114374.13	ENST00000417071.1	882	4	-186	23569	17	-23569	5prime_fragment	FALSE	canonical	3	509	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGGAGTATTTTTT	12660315	True	NA	NA	False	AAGAAA	-36	NA	12662350	12664686	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_12662707_12664639
transcript_98509.nic	chrY	+	721	2	ISM	ENSG00000114374.13	ENST00000417071.1	882	4	-183	23248	-14	-23248	5prime_fragment	FALSE	canonical	3	509	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTGGCGTGGTGGCGG	12660318	True	NA	NA	False	AATACA	-15	NA	12662353	12665007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_12662707_12664639
transcript_9851.nic	chr1	+	1368	8	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-24	35418	-24	13963	5prime_fragment	FALSE	canonical	3	177	junction_2	24.8103006916112	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAGTTTCAAGAGGT	214591367	True	NA	33	True	NA	NA	NA	214603170	214629153	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045
transcript_98510.known	chrY	+	4408	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	52.2673042517978	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	12891822	True	NA	18	True	AATAAA	-14	NA	12904867	12920478	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_98517.nic	chrY	+	2467	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_1	89.9675071553614	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGCACAGAGGTATGAT	12903421	True	NA	15	True	AATAAA	-27	NA	12905703	12918539	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_9852.nic	chr1	+	1110	7	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-24	42440	-24	6941	5prime_fragment	FALSE	canonical	3	177	junction_2	20.8626460450251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAAAGGCCAAGTGAA	214591367	True	NA	-55	True	AAGAAA	-44	NA	214603170	214622131	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078
transcript_98532.known	chrY	-	686	2	FSM	ENSG00000183878.16	ENST00000479713.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCGGGCTAAACCGGG	NA	False	NA	NA	False	NA	NA	NA	13479923	13479041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_13479318_13479513
transcript_98533.nnic	chrY	+	636	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1051	-372	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTGAGATTGCTTGT	NA	False	NA	4	True	AAAAAG	-15	NA	13702847	13705652	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_13702954_13704333_13704436_13705224
transcript_98535.nnic	chrY	+	1008	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1051	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	NA	False	NA	7	True	AATAAA	-18	NA	13702847	13706024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_13702954_13704333_13704436_13705224
transcript_98537.known	chrY	+	1337	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13703824	True	NA	7	True	AATAAA	-18	NA	13703898	13706024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_13704436_13705224
transcript_9854.nic	chr1	+	702	5	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-24	45414	-24	3967	5prime_fragment	FALSE	canonical	3	177	junction_2	24.5916652547159	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAGAGGTTGAAGA	214591367	True	NA	27	True	AAGAAA	-3	NA	214603170	214619157	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128
transcript_98540.nnic	chrY	+	1323	2	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13703630	True	NA	7	True	AATAAA	-18	NA	13703792	13706024	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_13704436_13705344
transcript_98541.known	chrY	-	510	2	FSM	ENSG00000129864.7	ENST00000250825.5	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	13986473	13985771	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_13986147_13986338
transcript_98542.known	chrY	+	540	2	FSM	ENSG00000129862.7	ENST00000250823.5	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	14056226	14056958	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_14056392_14056583
transcript_98543.nic	chrY	+	1231	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	22.4555115728856	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	14520979	True	NA	9	True	AATAAA	-23	NA	14522604	14733549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_98545.nic	chrY	+	1084	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	25.2239965112589	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	14524497	False	NA	9	True	AATAAA	-23	NA	14524518	14733549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_14524709_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_98546.nic	chrY	+	1107	4	NIC	ENSG00000165246.15	novel	722	4	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	22.7596133534821	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	14521043	False	NA	9	True	AATAAA	-23	NA	14522668	14733549	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_14522942_14622008_14622592_14723116_14723270_14733451
transcript_9855.nic	chr1	+	634	4	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-24	45916	-24	3465	5prime_fragment	FALSE	canonical	3	177	junction_2	27.8248490062789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTACAACTCCACTAACA	214591367	True	NA	-32	True	AATACA	-11	NA	214603170	214618655	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572
transcript_98550.nnic	chrY	-	835	3	NNC	ENSG00000230663.1	novel	2032	5	NA	NA	-94	-22384	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	4	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	17579848	17575183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_17575368_17576702_17576821_17579315
transcript_98554.nnic	chrY	+	1212	5	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-103	-498	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	21.1349828483488	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCAAATGTGTCATCTT	NA	False	NA	NA	False	AATAAA	-15	NA	18326149	18352712	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_18326342_18326530_18326691_18329190_18329309_18351883_18351969_18352055
transcript_98557.nnic	chrY	+	654	4	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-103	-22383	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	3.39934634239519	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	18326149	18330827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_18326342_18326530_18326691_18329190_18329309_18330643
transcript_98559.nnic	chrY	+	1766	3	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-74	-22383	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	24	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	18326178	18330827	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_18326691_18328238_18329309_18330643
transcript_9856.known	chr1	+	689	3	FSM	ENSG00000117724.14	ENST00000464322.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	30	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAACAAACAAACAGTG	214591391	True	NA	NA	False	NA	NA	NA	214603194	214615190	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_214603322_214613713_214613917_214614831
transcript_98569.known	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.202725191719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076008	18872500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
transcript_98570.known	chrY	-	593	4	FSM	ENSG00000176728.10	ENST00000670243.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	21.6999743983464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19075998	18872500	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18872835_18877067_18877206_19073498_19073562_19075940
transcript_98574.known	chrY	-	541	3	FSM	ENSG00000176728.10	ENST00000667262.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGTATCAGGTGAC	NA	False	NA	0	True	AATAAA	-15	NA	19076011	18872502	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18872835_18877067_18877206_19075940
transcript_98575.nnic	chrY	-	592	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	4	-13	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	16.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAGTGAAAAATATTGAG	NA	False	NA	-14	True	AATAAA	-18	NA	19076020	18932448	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_98576.nnic	chrY	-	342	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	16.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19076020	18932698	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_98578.known	chrY	-	978	3	FSM	ENSG00000176728.10	ENST00000669869.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTTGCATGTCATTT	NA	False	NA	NA	False	AATAAA	-11	NA	19076008	18932006	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18932842_19068723_19068799_19075940
transcript_98579.nnic	chrY	-	1882	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCATTTGATATGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	18690309	18681573	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_9858.known	chr1	+	10290	20	FSM	ENSG00000117724.14	ENST00000366955.8	10290	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_11	106.127660543376	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCCTAAGTGTAAA	214591391	True	NA	27	True	AATAAA	-24	NA	214603194	214664571	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920_214643325_214644556_214647401_214648674_214648828_214651709_214651887_214652827_214652990_214655240_214655404_214656932_214657410_214658849_214659029_214663590
transcript_98582.nnic	chrY	-	1357	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACAGCAGTGAAGCCA	NA	False	NA	NA	False	AATAAA	-25	NA	18690309	18682098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_98584.nnic	chrY	-	1367	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	15	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACAGCAGTGAAGCCA	NA	False	NA	NA	False	AATAAA	-25	NA	18690339	18682098	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrY_-_18683112_18684230_18684326_18690080
transcript_98586.nnic	chrY	-	1233	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAAAAAAATAGATAGTT	NA	False	NA	NA	False	AAAAAG	-7	NA	18690309	18682222	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_9859.known	chr1	+	4019	18	FSM	ENSG00000136636.13	ENST00000259154.9	4019	18	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	36.2925445364104	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTTTCAGTTATTTAAG	215561106	True	NA	18	True	AATAAA	-15	NA	215567303	215621807	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619152_215619292_215620056
transcript_98591.nnic	chrY	-	354	4	FSM	ENSG00000215580.12	ENST00000693243.1	352	4	-2	0	-2	0	multi-exon	FALSE	canonical	1	6	junction_3	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	2	True	AATAAA	-23	NA	19567009	19555389	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_19555555_19557229_19557290_19558039_19558141_19566981
transcript_98592.nnic	chrY	+	875	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	34.1092362857922	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561077	True	NA	-18	True	NA	NA	NA	19567312	19590247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567483_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_98593.nnic	chrY	+	1047	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	34.1092362857922	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561077	True	NA	NA	False	AATAAA	-16	NA	19567312	19590419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567483_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_98599.nnic	chrY	+	948	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.2615789047686	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561092	True	NA	-18	True	NA	NA	NA	19567327	19590247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567571_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_98600.nnic	chrY	+	1120	6	NNC	ENSG00000131002.13	novel	2098	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.2615789047686	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561092	True	NA	NA	False	AATAAA	-16	NA	19567327	19590419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567571_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_98607.known	chrY	+	1000	5	FSM	ENSG00000131002.13	ENST00000407724.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.1520547419432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561077	True	NA	-18	True	NA	NA	NA	19567312	19590247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567483_19587209_19587508_19588369_19588651_19589526_19589613_19590082
transcript_9861.known	chr1	-	5859	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	19.8270298106174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAAAGTTGTCAAAAT	-217628827	True	NA	NA	False	ATTAAA	-22	NA	217631090	217426991	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_9862.known	chr1	-	3218	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	12.9089116504839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-217628819	True	NA	-7	True	AATAAA	-27	NA	217631082	217608183	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_98626.nic	chrY	+	2048	4	NIC	ENSG00000131002.13	novel	1000	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_2	17.7451088722749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561077	True	NA	NA	False	AATAAA	-16	NA	19567312	19590419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_19567483_19587209_19587508_19588369_19589613_19590082
transcript_98628.known	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	6.94422221866655	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	19561146	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
transcript_98631.known	chrY	+	2098	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	13.4742552876052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	19561114	True	NA	NA	False	AATAAA	-15	NA	19567349	19590418	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
transcript_98634.nic	chrY	+	798	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-44	176	15	0	multi-exon	FALSE	canonical	3	78	junction_1	6.54896090146283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561092	True	NA	-18	True	NA	NA	NA	19567327	19590247	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_98635.nic	chrY	+	970	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-44	4	15	0	multi-exon	FALSE	canonical	3	78	junction_1	6.54896090146283	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561092	True	NA	NA	False	AATAAA	-16	NA	19567327	19590419	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_98637.nnic	chrY	+	2037	4	NNC	ENSG00000131002.13	novel	1911	3	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_1	26.7124606795322	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	19561106	True	NA	5	True	AATAAA	-16	NA	19567341	19589849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567483_19576704_19576823_19587209_19587508_19588369
transcript_98639.known	chrY	+	7299	5	FSM	ENSG00000131002.13	ENST00000253320.8	7299	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.0600499231632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGCCTCTGTGTATT	19592432	False	NA	113	True	ACTAAA	-21	NA	19592449	19606274	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19592815_19593398_19597666_19599738_19599832_19602215_19602312_19603796
transcript_98641.nic	chrY	+	1948	3	FSM	ENSG00000131002.13	ENST00000686905.1	1911	3	-37	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	20.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	19561077	True	NA	5	True	AATAAA	-16	NA	19567312	19589849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567483_19587209_19587508_19588369
transcript_98644.nic	chrY	+	2021	3	FSM	ENSG00000131002.13	ENST00000693214.1	2569	3	-22	570	15	0	multi-exon	FALSE	canonical	3	61	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	19561092	True	NA	5	True	AATAAA	-16	NA	19567327	19589849	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19588369
transcript_98647.nic	chrY	+	1119	2	ISM	ENSG00000131002.13	ENST00000686905.1	1911	3	-37	1691	0	-1689	5prime_fragment	FALSE	canonical	3	102	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGTAATATATAAAGTA	19561077	True	NA	NA	False	NA	NA	NA	19567312	19588158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_19567483_19587209
transcript_98648.nic	chrY	+	1192	2	ISM	ENSG00000131002.13	ENST00000459719.6	2098	4	-22	2260	15	-1689	5prime_fragment	FALSE	canonical	3	78	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGTAATATATAAAGTA	19561092	True	NA	NA	False	NA	NA	NA	19567327	19588158	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_19567571_19587209
transcript_9865.nic	chr1	-	766	2	ISM	ENSG00000092978.11	ENST00000366934.3	3218	6	-21	11738	-13	-11738	5prime_fragment	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTTGAAAATAATCAGA	-217628840	True	NA	NA	False	NA	NA	NA	217631103	217619921	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_217620500_217630915
transcript_98652.known	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_3	31.8821615048638	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	20572890	True	NA	3	True	AATAAA	-14	NA	20575775	20593154	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
transcript_98658.known	chrY	+	746	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	180.274901192595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	20572908	True	NA	14	True	AATAAA	-26	NA	20575793	20592630	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
transcript_9873.known	chr1	+	7765	5	FSM	ENSG00000067533.6	ENST00000366932.4	7765	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	19.8179211826064	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTTCTTGATTTTT	218279949	True	NA	11	True	AATAAA	-21	NA	218285292	218337983	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_218285456_218302293_218302560_218305027_218305126_218307430_218307633_218330947
transcript_9874.known	chr1	+	5868	7	FSM	ENSG00000092969.12	ENST00000366930.9	5868	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.18416219575713	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTGCTTTGTC	218345211	True	NA	NA	False	AATAAA	-33	NA	218345335	218444619	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_218347048_218405168_218405333_218434081_218434215_218434337_218434449_218435969_218436148_218437342_218437497_218441203
transcript_9880.known	chr1	+	1857	5	FSM	ENSG00000143353.12	ENST00000366928.10	1857	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	35.4118624192515	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTCTCTGCATCGA	219172502	True	NA	6	True	AATAAA	-18	NA	219173877	219212858	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_9882.known	chr1	+	1819	5	FSM	ENSG00000143353.12	ENST00000366927.3	1819	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	129.263297188336	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172499	True	NA	13	True	AATAAA	-25	NA	219173874	219212865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219193129_219193252_219210531_219210648_219211491
transcript_9884.known	chr1	+	2169	5	FSM	ENSG00000143353.12	ENST00000483635.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	134.46560898609	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172520	True	NA	13	True	AATAAA	-25	NA	219173895	219212865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219174305_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_9888.known	chr1	+	1662	4	FSM	ENSG00000143353.12	ENST00000474379.5	1662	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	169.096290780004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172551	False	NA	13	True	AATAAA	-25	NA	219173926	219212865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219210514_219210648_219211491
transcript_9889.known	chr1	+	1703	4	FSM	ENSG00000143353.12	ENST00000460522.5	1703	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	161.099003376461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172493	True	NA	13	True	AATAAA	-25	NA	219173868	219212865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219210531_219210648_219211491
transcript_9891.known	chr1	+	1701	4	FSM	ENSG00000143353.12	ENST00000469590.5	1701	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	164.121905911429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219174114	False	NA	13	True	AATAAA	-25	NA	219174193	219212865	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219174305_219179146_219179247_219210531_219210648_219211491
transcript_9892.known	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_18	124.085256515411	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	-220038987	True	NA	-5	True	AATAAA	-14	NA	220046505	219968599	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_9893.nic	chr1	-	3227	22	NIC	ENSG00000136628.18	novel	2968	21	NA	NA	-4	-1726	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	222.605698606649	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAAATCTTGCTGATTG	-220046488	False	NA	NA	False	NA	NA	NA	220046534	219984235	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_9895.known	chr1	-	2968	21	FSM	ENSG00000136628.18	ENST00000609181.5	2968	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	224.955434475364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	-220038933	True	NA	NA	False	NA	NA	NA	220046451	219987295	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_9900.nic	chr1	-	875	7	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-83	37857	-4	-23952	5prime_fragment	FALSE	canonical	3	659	junction_2	47	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAGATTTTGAGAA	-220046488	False	NA	8	True	TTTAAA	-43	NA	220046534	220025152	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_9905.known	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.96869555732605	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	-220088245	True	NA	NA	False	ATTAAA	-21	NA	220089788	220057481	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_9906.known	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_8	48.5148865285289	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	220085146	True	NA	14	True	AATAAA	-18	NA	220094131	220148041	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
transcript_9908.nic	chr1	+	418	2	ISM	ENSG00000067704.10	ENST00000366922.3	3530	23	-32	51904	-32	-38709	5prime_fragment	FALSE	canonical	3	578	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAAAGTAAAGACA	220085114	True	NA	NA	False	TTTAAA	-39	NA	220094099	220096137	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_220094484_220096103
transcript_9909.known	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	32.4873811009113	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-220264973	True	NA	-38	True	AATAAA	-14	NA	220272453	220148292	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_9911.nnic	chr1	-	1384	10	FSM	ENSG00000118873.17_ENSG00000222370.1	ENST00000689820.1	1135	10	-32	-217	8	41	multi-exon	FALSE	canonical	3	3	junction_1	50.2880591083896	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAGGTCTGGTTAATTT	-220264995	True	NA	NA	False	AATAAA	-23	NA	220272475	220200504	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220200940_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_9913.nic	chr1	-	1428	6	FSM	ENSG00000118873.17	ENST00000688281.1	1320	6	-108	0	8	0	multi-exon	FALSE	canonical	3	129	junction_3	16.7140659326209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCTTGTTACTAGTGA	-220264995	True	NA	NA	False	AGTAAA	-11	NA	220272475	220210020	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_9914.known	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	-220264881	True	NA	-8	True	AGTAAA	-15	NA	220272361	220265984	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220267752_220272222
transcript_9915.known	chr1	-	2589	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGATGTGTCTTTTTTT	-221741903	True	NA	NA	False	TATAAA	-10	NA	221742089	221701423	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
transcript_9920.known	chr1	-	1910	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_4	12.6728055299527	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588752	True	NA	-3	True	AATAAA	-24	NA	222589933	222558311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_9923.nic	chr1	-	1796	10	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	19.1717384593979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588752	True	NA	-3	True	AATAAA	-24	NA	222589933	222558311	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222584127_222584298_222588442_222588566_222589726
transcript_9929.known	chr1	+	1503	2	FSM	ENSG00000225265.2	ENST00000668515.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGTCCTTTGTGCT	222590168	True	NA	NA	False	AATAAA	-34	NA	222590178	222593439	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222590408_222592165
transcript_9931.known	chr1	+	459	2	FSM	ENSG00000225265.2	ENST00000441835.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCAGTGATTTCTTACA	NA	False	NA	12	True	AATAAA	-26	NA	222589824	222592486	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222589963_222592165
transcript_9932.known	chr1	+	2735	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.0998518790582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	222644036	True	NA	11	True	AATAAA	-19	NA	222644302	222665823	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_9935.known	chr1	+	8126	28	FSM	ENSG00000154305.18	ENST00000344922.10	8126	28	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	42.7865791811485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCAATTTAAGCTTC	222613604	True	NA	16	True	ATTAAA	-16	NA	222618096	222668007	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_9940.known	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	22.4669853807485	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-222706844	True	NA	-7	True	ATTAAA	-16	NA	222712491	222668012	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
transcript_9946.nnic	chr1	+	2505	7	NNC	ENSG00000162819.12	novel	709	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	40.5695561830406	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	222712037	False	NA	17	True	AATAAA	-18	NA	222713354	222735187	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_222713417_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724142_222733211
transcript_9947.known	chr1	+	782	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTAGGCATTTCATA	222712209	True	NA	97	True	AATAAA	-17	NA	222712558	222713985	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222712943_222713587
transcript_9951.nic	chr1	+	786	5	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	16	junction_2	35.5035209521535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813335	True	NA	4	True	AATAAA	-17	NA	222815014	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815079_222823883_222823946_222827427_222827602_222835118_222835216_222836995
transcript_9953.nic	chr1	+	460	5	NIC	ENSG00000154309.9	novel	362	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	29.9614335438076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813335	True	NA	4	True	AATAAA	-17	NA	222815014	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995_222837067_222837218
transcript_9958.nic	chr1	+	529	5	NIC	ENSG00000154309.9	novel	517	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	29.2489316044193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813359	True	NA	4	True	AATAAA	-17	NA	222815038	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995_222837067_222837218
transcript_9960.nic	chr1	+	612	4	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	27	junction_1	30.2250815640844	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813335	True	NA	4	True	AATAAA	-17	NA	222815014	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995
transcript_9962.known	chr1	+	362	4	FSM	ENSG00000154309.9	ENST00000444858.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	37.6504389822424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813371	True	NA	4	True	AATAAA	-17	NA	222815050	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815079_222835118_222835216_222836995_222837067_222837218
transcript_9964.nic	chr1	+	681	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	28.9865869364129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813359	True	NA	4	True	AATAAA	-17	NA	222815038	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995
transcript_9965.nnic	chr1	+	458	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	21.0607586652417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813359	True	NA	4	True	AATAAA	-17	NA	222815038	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222837218
transcript_9966.known	chr1	+	373	4	FSM	ENSG00000154309.9	ENST00000669958.1	373	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	35.873233599564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	222813449	True	NA	0	True	AATAAA	-13	NA	222815128	222837380	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222835118_222835216_222836995_222837067_222837218
transcript_9970.known	chr1	+	543	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	43.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813342	True	NA	4	True	AATAAA	-17	NA	222815021	222837384	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815079_222835118_222835216_222836995
transcript_9972.known	chr1	+	445	3	FSM	ENSG00000154309.9	ENST00000420335.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	40.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGAGCTGTCTCTCCAC	222813449	True	NA	-80	True	NA	NA	NA	222815128	222837300	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222835118_222835216_222836995
transcript_9974.known	chr1	+	771	5	FSM	ENSG00000154309.9	ENST00000435378.6	771	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.4493345951487	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTTTTTTTTGGTATT	222813379	True	NA	5	True	AATAAA	-18	NA	222815058	222837385	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815079_222823855_222823946_222827427_222827602_222835118_222835216_222836995
transcript_9975.known	chr1	+	517	5	FSM	ENSG00000154309.9	ENST00000457636.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	36.5136960605195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	222813398	True	NA	3	True	AATAAA	-16	NA	222815077	222837383	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222823855_222823946_222835118_222835216_222836995_222837067_222837218
transcript_9978.known	chr1	-	1056	6	FSM	ENSG00000143502.16	ENST00000344029.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.45527267879434	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATTTTTATCCTATA	-223363965	True	NA	-18	True	AATAAA	-17	NA	223364167	223234914	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_223235101_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_9980.known	chr1	+	3366	21	FSM	ENSG00000162909.18	ENST00000295006.6	3366	21	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_10	23.2969418593943	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAACTTTGATAATCT	223710453	True	NA	NA	False	ATTAAA	-32	NA	223712538	223776018	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
transcript_9985.nic	chr1	+	1748	3	NIC	ENSG00000185495.10	novel	487	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTGGACTCTCTT	223991353	True	NA	12	True	AATAAA	-22	NA	223992727	224010612	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_223993048_224003519_224003655_224009319
transcript_9989.known	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_4	16.8077363139716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	224109320	True	NA	5	True	AATAAA	-17	NA	224114110	224162047	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
transcript_9992.known	chr1	+	1415	4	FSM	ENSG00000143756.12	ENST00000523990.1	1415	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	67.7757741051739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATCTTTTTGTTATAAG	224109328	True	NA	NA	False	TTTAAA	-30	NA	224114118	224158182	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224114397_224130471_224130582_224153141_224153338_224157351
transcript_9993.known	chr1	+	628	3	FSM	ENSG00000143756.12	ENST00000483773.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCATTTGTATGATCTTT	224109380	True	NA	NA	False	TATAAA	-4	NA	224114170	224134365	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224114397_224130471_224130582_224134073
transcript_9997.known	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	7	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	224181336	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	WTC11_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224183419_224189576_224190320_224192331
